Query 047171
Match_columns 1224
No_of_seqs 740 out of 5606
Neff 8.3
Searched_HMMs 46136
Date Fri Mar 29 08:26:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047171.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047171hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0055 Multidrug/pheromone ex 100.0 1E-214 3E-219 1948.9 126.0 1185 3-1219 14-1227(1228)
2 PTZ00265 multidrug resistance 100.0 2E-171 4E-176 1691.5 151.4 1199 4-1218 47-1466(1466)
3 KOG0054 Multidrug resistance-a 100.0 4E-161 8E-166 1514.8 122.5 1122 33-1219 217-1377(1381)
4 PLN03130 ABC transporter C fam 100.0 1E-155 3E-160 1554.4 144.7 1136 19-1219 303-1476(1622)
5 PLN03232 ABC transporter C fam 100.0 4E-154 8E-159 1543.7 141.4 1131 19-1219 303-1473(1495)
6 TIGR00957 MRP_assoc_pro multi 100.0 5E-149 1E-153 1496.3 144.0 1160 20-1217 320-1520(1522)
7 PTZ00243 ABC transporter; Prov 100.0 3E-142 7E-147 1424.6 145.2 1146 19-1218 246-1547(1560)
8 TIGR01271 CFTR_protein cystic 100.0 4E-140 8E-145 1405.6 144.4 1153 24-1219 87-1454(1490)
9 KOG0058 Peptide exporter, ABC 100.0 3E-111 6E-116 983.4 67.3 576 637-1221 133-708 (716)
10 KOG0058 Peptide exporter, ABC 100.0 5E-107 1E-111 947.9 63.4 546 3-558 134-706 (716)
11 KOG0055 Multidrug/pheromone ex 100.0 2.9E-99 6E-104 929.8 68.2 547 3-557 651-1226(1228)
12 COG2274 SunT ABC-type bacterio 100.0 8.8E-93 1.9E-97 867.8 71.7 566 641-1218 144-709 (709)
13 COG2274 SunT ABC-type bacterio 100.0 4.2E-90 9.1E-95 844.2 69.6 541 5-556 143-708 (709)
14 COG1132 MdlB ABC-type multidru 100.0 4.5E-87 9.8E-92 829.1 74.6 562 640-1219 5-566 (567)
15 PRK11174 cysteine/glutathione 100.0 7.2E-87 1.6E-91 832.3 76.4 570 638-1220 9-587 (588)
16 TIGR00958 3a01208 Conjugate Tr 100.0 1.2E-85 2.5E-90 831.9 74.4 566 636-1214 146-711 (711)
17 COG4988 CydD ABC-type transpor 100.0 4.1E-85 9E-90 751.6 69.3 553 655-1219 4-557 (559)
18 PRK11174 cysteine/glutathione 100.0 4.3E-85 9.4E-90 816.3 72.4 544 3-558 9-586 (588)
19 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 5.7E-84 1.2E-88 818.2 76.2 562 639-1217 123-685 (686)
20 COG1132 MdlB ABC-type multidru 100.0 3.6E-84 7.8E-89 803.2 72.3 541 2-557 2-565 (567)
21 TIGR01193 bacteriocin_ABC ABC- 100.0 1.5E-83 3.3E-88 817.1 74.7 564 638-1215 143-707 (708)
22 PRK11160 cysteine/glutathione 100.0 5.3E-83 1.1E-87 790.7 75.1 566 640-1216 5-573 (574)
23 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 4.8E-83 1E-87 813.5 74.3 566 638-1214 141-709 (710)
24 PTZ00265 multidrug resistance 100.0 5.3E-83 1.2E-87 847.7 72.3 543 5-556 814-1465(1466)
25 PRK11176 lipid transporter ATP 100.0 5.9E-82 1.3E-86 787.8 75.4 568 639-1219 13-581 (582)
26 TIGR00958 3a01208 Conjugate Tr 100.0 2.7E-82 5.8E-87 801.3 71.4 536 4-552 149-710 (711)
27 TIGR03375 type_I_sec_LssB type 100.0 5.7E-82 1.2E-86 800.9 74.6 553 641-1204 137-689 (694)
28 PRK10790 putative multidrug tr 100.0 2E-81 4.3E-86 783.3 76.2 567 638-1219 10-577 (592)
29 KOG0056 Heavy metal exporter H 100.0 3.9E-85 8.5E-90 716.1 36.3 503 707-1218 272-775 (790)
30 PRK11160 cysteine/glutathione 100.0 2E-81 4.4E-86 776.5 72.3 541 1-554 1-572 (574)
31 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 4.9E-81 1.1E-85 791.4 74.1 537 4-556 123-685 (686)
32 TIGR01846 type_I_sec_HlyB type 100.0 9.4E-81 2E-85 788.9 76.0 567 639-1218 127-693 (694)
33 COG4987 CydC ABC-type transpor 100.0 5.7E-81 1.2E-85 703.1 64.1 505 701-1215 65-571 (573)
34 TIGR01193 bacteriocin_ABC ABC- 100.0 6.8E-81 1.5E-85 792.8 71.8 539 4-554 144-707 (708)
35 KOG0057 Mitochondrial Fe/S clu 100.0 2.5E-81 5.4E-86 706.0 59.1 550 659-1220 38-589 (591)
36 TIGR02203 MsbA_lipidA lipid A 100.0 6.3E-80 1.4E-84 768.9 75.1 565 641-1218 4-569 (571)
37 KOG0056 Heavy metal exporter H 100.0 2E-83 4.3E-88 702.7 36.8 531 20-559 218-777 (790)
38 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 2.9E-80 6.2E-85 788.1 71.1 538 4-553 142-709 (710)
39 TIGR03375 type_I_sec_LssB type 100.0 6.2E-80 1.3E-84 782.3 71.7 530 4-541 135-689 (694)
40 PRK13657 cyclic beta-1,2-gluca 100.0 4.7E-79 1E-83 760.7 77.3 566 638-1218 6-571 (588)
41 TIGR01192 chvA glucan exporter 100.0 1.1E-78 2.3E-83 753.0 77.2 565 639-1218 7-571 (585)
42 PRK11176 lipid transporter ATP 100.0 2.8E-79 6.1E-84 763.7 72.3 542 4-557 13-580 (582)
43 TIGR02868 CydC thiol reductant 100.0 2.5E-79 5.4E-84 754.9 69.4 525 642-1175 4-529 (529)
44 COG4988 CydD ABC-type transpor 100.0 8.2E-79 1.8E-83 699.6 67.4 528 22-558 5-557 (559)
45 TIGR02204 MsbA_rel ABC transpo 100.0 1.8E-78 3.8E-83 756.2 75.3 569 640-1217 7-575 (576)
46 PRK10789 putative multidrug tr 100.0 9.9E-79 2.2E-83 752.6 71.7 544 664-1219 8-552 (569)
47 TIGR01846 type_I_sec_HlyB type 100.0 3.1E-78 6.8E-83 765.9 73.6 541 4-556 127-692 (694)
48 PRK10790 putative multidrug tr 100.0 5.3E-78 1.1E-82 752.5 72.3 540 4-558 11-577 (592)
49 TIGR01192 chvA glucan exporter 100.0 1.5E-77 3.2E-82 742.9 74.1 543 4-556 7-570 (585)
50 TIGR02203 MsbA_lipidA lipid A 100.0 3.7E-77 8E-82 744.1 72.6 541 4-556 2-568 (571)
51 PRK13657 cyclic beta-1,2-gluca 100.0 5.6E-77 1.2E-81 742.0 74.0 544 4-557 7-571 (588)
52 TIGR02868 CydC thiol reductant 100.0 1.4E-77 3.1E-82 739.2 66.2 502 5-512 2-529 (529)
53 COG5265 ATM1 ABC-type transpor 100.0 9.1E-80 2E-84 670.8 40.0 491 716-1215 4-496 (497)
54 PRK10789 putative multidrug tr 100.0 1.1E-76 2.5E-81 734.2 70.3 518 30-558 8-552 (569)
55 TIGR02857 CydD thiol reductant 100.0 2E-76 4.4E-81 729.0 70.5 527 651-1187 3-529 (529)
56 KOG0057 Mitochondrial Fe/S clu 100.0 3.7E-77 8E-82 672.3 55.2 542 4-557 13-587 (591)
57 TIGR02204 MsbA_rel ABC transpo 100.0 1.4E-75 2.9E-80 730.2 72.3 544 4-556 6-575 (576)
58 TIGR01842 type_I_sec_PrtD type 100.0 6.7E-75 1.5E-79 716.1 72.1 536 651-1204 6-543 (544)
59 COG4987 CydC ABC-type transpor 100.0 8.1E-75 1.8E-79 653.3 62.4 527 16-554 15-571 (573)
60 COG5265 ATM1 ABC-type transpor 100.0 8.2E-77 1.8E-81 647.6 41.1 479 67-554 4-496 (497)
61 TIGR02857 CydD thiol reductant 100.0 2.1E-74 4.6E-79 711.1 68.0 499 19-524 5-529 (529)
62 TIGR00957 MRP_assoc_pro multi 100.0 9.6E-74 2.1E-78 768.8 72.0 481 63-555 1023-1519(1522)
63 TIGR01842 type_I_sec_PrtD type 100.0 5.9E-73 1.3E-77 698.7 70.1 509 18-540 7-542 (544)
64 PLN03130 ABC transporter C fam 100.0 2.1E-72 4.5E-77 753.6 71.5 484 63-557 971-1475(1622)
65 COG1123 ATPase components of v 100.0 1.2E-73 2.6E-78 661.2 46.9 467 328-1217 23-532 (539)
66 PTZ00243 ABC transporter; Prov 100.0 1.4E-71 3E-76 745.0 71.1 485 65-557 1018-1547(1560)
67 TIGR01194 cyc_pep_trnsptr cycl 100.0 3.9E-71 8.4E-76 682.1 65.6 536 638-1195 4-551 (555)
68 PLN03232 ABC transporter C fam 100.0 4.3E-71 9.4E-76 742.2 69.2 484 63-557 968-1472(1495)
69 TIGR01194 cyc_pep_trnsptr cycl 100.0 4.8E-70 1E-74 672.4 64.5 513 3-532 4-551 (555)
70 PRK13549 xylose transporter AT 100.0 3.2E-71 6.9E-76 676.8 45.7 451 328-1202 6-493 (506)
71 PRK10261 glutathione transport 100.0 1.2E-70 2.6E-75 683.5 50.0 488 327-1215 12-565 (623)
72 COG4618 ArpD ABC-type protease 100.0 1.8E-69 3.9E-74 603.4 52.3 530 659-1204 31-561 (580)
73 PRK15134 microcin C ABC transp 100.0 3.8E-70 8.3E-75 670.8 48.0 440 342-1204 34-516 (529)
74 PRK09700 D-allose transporter 100.0 9.3E-70 2E-74 665.1 47.8 434 342-1200 30-495 (510)
75 PRK10762 D-ribose transporter 100.0 1.1E-69 2.4E-74 662.3 46.0 438 330-1202 20-483 (501)
76 TIGR03269 met_CoM_red_A2 methy 100.0 8.1E-70 1.7E-74 667.2 43.0 220 977-1203 279-517 (520)
77 COG4172 ABC-type uncharacteriz 100.0 3.9E-69 8.4E-74 582.3 40.6 454 329-1212 25-524 (534)
78 TIGR02633 xylG D-xylose ABC tr 100.0 5E-69 1.1E-73 657.6 46.7 446 329-1201 16-490 (500)
79 PRK11288 araG L-arabinose tran 100.0 4.2E-69 9.2E-74 657.2 45.4 445 328-1202 5-484 (501)
80 TIGR01257 rim_protein retinal- 100.0 7.9E-66 1.7E-70 677.8 78.7 216 976-1204 1936-2160(2272)
81 PRK15439 autoinducer 2 ABC tra 100.0 1.2E-68 2.7E-73 653.2 48.7 455 327-1203 11-492 (510)
82 TIGR01271 CFTR_protein cystic 100.0 1.3E-66 2.9E-71 697.5 71.3 481 63-558 943-1454(1490)
83 PRK10982 galactose/methyl gala 100.0 2.7E-68 6E-73 649.1 45.4 442 328-1201 12-478 (491)
84 PRK10522 multidrug transporter 100.0 8E-66 1.7E-70 635.1 65.3 524 647-1203 9-539 (547)
85 PRK10938 putative molybdenum t 100.0 3.4E-67 7.5E-72 639.8 44.6 441 328-1196 4-485 (490)
86 KOG0054 Multidrug resistance-a 100.0 1.5E-65 3.2E-70 648.1 60.2 483 63-554 876-1373(1381)
87 TIGR00956 3a01205 Pleiotropic 100.0 4.1E-66 8.8E-71 686.7 57.1 212 977-1199 759-989 (1394)
88 COG4618 ArpD ABC-type protease 100.0 1.7E-65 3.6E-70 571.6 51.1 509 20-541 26-561 (580)
89 PRK15064 ABC transporter ATP-b 100.0 7.5E-66 1.6E-70 633.0 52.8 203 976-1204 318-526 (530)
90 PRK10522 multidrug transporter 100.0 4.2E-64 9E-69 619.9 64.6 503 8-537 5-536 (547)
91 PRK11819 putative ABC transpor 100.0 2.6E-64 5.7E-69 620.9 52.1 202 976-1204 323-534 (556)
92 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 5.8E-64 1.3E-68 618.0 52.5 200 977-1203 322-531 (552)
93 TIGR00954 3a01203 Peroxysomal 100.0 8.2E-62 1.8E-66 606.4 62.2 531 639-1189 79-653 (659)
94 TIGR00954 3a01203 Peroxysomal 100.0 5.6E-62 1.2E-66 607.9 57.9 504 3-526 78-653 (659)
95 PRK10636 putative ABC transpor 100.0 7.9E-63 1.7E-67 613.4 50.0 200 977-1202 312-516 (638)
96 PLN03140 ABC transporter G fam 100.0 4.4E-61 9.6E-66 634.7 67.4 213 977-1199 867-1106(1470)
97 PRK11147 ABC transporter ATPas 100.0 1.1E-60 2.4E-65 596.3 53.6 201 977-1203 319-528 (635)
98 PLN03073 ABC transporter F fam 100.0 4.5E-61 9.8E-66 597.5 47.7 200 976-1201 507-712 (718)
99 PRK13409 putative ATPase RIL; 100.0 3.7E-61 7.9E-66 588.9 38.9 192 977-1197 340-536 (590)
100 COG1129 MglA ABC-type sugar tr 100.0 2.6E-60 5.6E-65 547.1 42.1 446 328-1195 9-482 (500)
101 COG0488 Uup ATPase components 100.0 2.6E-59 5.7E-64 555.6 47.7 204 975-1204 319-526 (530)
102 COG3845 ABC-type uncharacteriz 100.0 5E-58 1.1E-62 514.7 41.5 451 328-1200 5-489 (501)
103 cd03289 ABCC_CFTR2 The CFTR su 100.0 7E-53 1.5E-57 469.4 27.2 237 976-1217 1-237 (275)
104 COG1126 GlnQ ABC-type polar am 100.0 3.5E-50 7.6E-55 405.9 22.2 223 977-1213 2-235 (240)
105 PRK14257 phosphate ABC transpo 100.0 3.9E-49 8.4E-54 450.8 27.6 225 972-1204 75-314 (329)
106 COG1135 AbcC ABC-type metal io 100.0 2.3E-49 5E-54 420.2 22.2 228 978-1216 2-244 (339)
107 COG1117 PstB ABC-type phosphat 100.0 1.8E-48 3.8E-53 390.9 18.5 218 977-1204 7-238 (253)
108 COG1126 GlnQ ABC-type polar am 100.0 7.1E-48 1.5E-52 389.2 20.2 207 328-541 3-226 (240)
109 KOG0927 Predicted transporter 100.0 1.2E-46 2.7E-51 423.1 27.2 194 977-1195 389-587 (614)
110 cd03252 ABCC_Hemolysin The ABC 100.0 1.6E-46 3.5E-51 414.5 27.5 235 978-1215 1-235 (237)
111 COG1125 OpuBA ABC-type proline 100.0 2.8E-47 6.1E-52 391.5 18.7 223 978-1214 2-236 (309)
112 cd03288 ABCC_SUR2 The SUR doma 100.0 5E-46 1.1E-50 414.6 28.4 241 974-1217 16-256 (257)
113 cd03253 ABCC_ATM1_transporter 100.0 6E-45 1.3E-49 401.9 27.2 235 978-1216 1-235 (236)
114 cd03289 ABCC_CFTR2 The CFTR su 100.0 4.9E-45 1.1E-49 406.5 26.5 225 326-556 1-237 (275)
115 cd03251 ABCC_MsbA MsbA is an e 100.0 6.5E-45 1.4E-49 401.1 26.7 232 978-1212 1-232 (234)
116 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 7.5E-45 1.6E-49 401.5 27.0 235 978-1214 1-235 (238)
117 COG1125 OpuBA ABC-type proline 100.0 1.2E-45 2.5E-50 379.6 18.1 208 328-542 2-227 (309)
118 cd03254 ABCC_Glucan_exporter_l 100.0 9.6E-45 2.1E-49 398.4 26.7 227 976-1204 1-227 (229)
119 cd03244 ABCC_MRP_domain2 Domai 100.0 9.1E-45 2E-49 396.3 26.2 220 976-1197 1-220 (221)
120 COG1135 AbcC ABC-type metal io 100.0 2.2E-45 4.8E-50 389.9 19.7 203 329-541 21-232 (339)
121 COG1120 FepC ABC-type cobalami 100.0 5.1E-45 1.1E-49 390.5 22.6 214 977-1204 2-229 (258)
122 COG1117 PstB ABC-type phosphat 100.0 3.2E-45 6.9E-50 367.5 18.4 208 327-541 7-238 (253)
123 TIGR02314 ABC_MetN D-methionin 100.0 9E-45 1.9E-49 415.0 24.4 227 978-1215 2-242 (343)
124 COG1124 DppF ABC-type dipeptid 100.0 1.2E-44 2.7E-49 374.2 20.5 227 977-1214 3-241 (252)
125 COG1127 Ttg2A ABC-type transpo 100.0 2.9E-44 6.3E-49 368.8 22.2 224 977-1215 8-246 (263)
126 PRK13631 cbiO cobalt transport 100.0 4.8E-44 1.1E-48 407.8 26.6 221 976-1203 20-265 (320)
127 COG3839 MalK ABC-type sugar tr 100.0 2.1E-44 4.5E-49 400.5 22.8 213 977-1205 3-225 (338)
128 cd03245 ABCC_bacteriocin_expor 100.0 8E-44 1.7E-48 388.6 26.2 220 976-1196 1-220 (220)
129 COG4178 ABC-type uncharacteriz 100.0 1.3E-40 2.8E-45 391.1 54.9 475 696-1188 88-587 (604)
130 KOG0062 ATPase component of AB 100.0 1.7E-43 3.6E-48 395.8 27.9 211 976-1219 361-576 (582)
131 COG3840 ThiQ ABC-type thiamine 100.0 3.3E-44 7.2E-49 350.1 19.1 209 978-1204 2-220 (231)
132 COG1122 CbiO ABC-type cobalt t 100.0 7.3E-44 1.6E-48 383.0 22.1 215 977-1204 3-229 (235)
133 COG4615 PvdE ABC-type sideroph 100.0 1.1E-40 2.3E-45 360.1 45.6 473 696-1195 50-529 (546)
134 KOG0065 Pleiotropic drug resis 100.0 3.7E-42 8E-47 423.8 38.7 197 992-1198 803-1016(1391)
135 COG3840 ThiQ ABC-type thiamine 100.0 5.6E-44 1.2E-48 348.5 18.0 201 328-541 2-220 (231)
136 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 2.1E-43 4.7E-48 375.6 23.8 210 977-1204 4-228 (254)
137 COG3638 ABC-type phosphate/pho 100.0 1.1E-43 2.3E-48 363.6 20.7 213 977-1202 3-236 (258)
138 COG1116 TauB ABC-type nitrate/ 100.0 1E-43 2.2E-48 371.8 20.9 197 977-1192 3-211 (248)
139 cd03248 ABCC_TAP TAP, the Tran 100.0 2.2E-43 4.8E-48 386.6 24.4 219 974-1192 8-226 (226)
140 cd03261 ABC_Org_Solvent_Resist 100.0 1.5E-43 3.2E-48 390.2 23.1 213 978-1204 1-227 (235)
141 COG4615 PvdE ABC-type sideroph 100.0 2.2E-40 4.7E-45 357.7 46.3 444 63-532 66-529 (546)
142 cd03260 ABC_PstB_phosphate_tra 100.0 1.2E-43 2.6E-48 388.9 21.7 212 978-1201 1-227 (227)
143 COG2884 FtsE Predicted ATPase 100.0 7.4E-44 1.6E-48 351.2 17.4 208 978-1198 2-221 (223)
144 cd03369 ABCC_NFT1 Domain 2 of 100.0 8.6E-43 1.9E-47 376.3 25.5 206 973-1198 2-207 (207)
145 COG1136 SalX ABC-type antimicr 100.0 6.6E-43 1.4E-47 366.9 23.6 207 978-1194 2-222 (226)
146 PRK14269 phosphate ABC transpo 100.0 7E-43 1.5E-47 387.2 24.6 218 977-1204 2-231 (246)
147 PRK13650 cbiO cobalt transport 100.0 6.1E-43 1.3E-47 393.7 24.2 217 977-1204 4-230 (279)
148 COG3842 PotA ABC-type spermidi 100.0 2E-43 4.3E-48 394.8 19.1 217 977-1210 5-232 (352)
149 PRK14257 phosphate ABC transpo 100.0 1.4E-42 3.1E-47 396.8 25.4 210 325-541 78-314 (329)
150 PRK11650 ugpC glycerol-3-phosp 100.0 1.8E-42 3.9E-47 399.8 26.0 213 977-1204 3-225 (356)
151 PRK13637 cbiO cobalt transport 100.0 1.4E-42 3.1E-47 392.0 24.1 217 978-1203 3-234 (287)
152 PRK11432 fbpC ferric transport 100.0 1.6E-42 3.4E-47 398.9 24.7 212 977-1204 6-227 (351)
153 cd03219 ABC_Mj1267_LivG_branch 100.0 1.5E-42 3.2E-47 382.9 23.0 222 978-1204 1-233 (236)
154 TIGR01186 proV glycine betaine 100.0 1.2E-42 2.5E-47 399.5 23.0 211 993-1214 6-230 (363)
155 PRK11153 metN DL-methionine tr 100.0 2.1E-42 4.5E-47 399.2 25.2 231 978-1215 2-242 (343)
156 PRK14273 phosphate ABC transpo 100.0 2.8E-42 6.1E-47 384.5 25.3 218 977-1204 7-239 (254)
157 PRK14250 phosphate ABC transpo 100.0 3.3E-42 7.1E-47 380.4 25.6 224 977-1214 3-231 (241)
158 PRK13647 cbiO cobalt transport 100.0 2.1E-42 4.5E-47 388.3 24.3 212 977-1201 4-225 (274)
159 PRK14242 phosphate transporter 100.0 2.4E-42 5.3E-47 384.9 24.2 218 977-1204 6-238 (253)
160 cd03252 ABCC_Hemolysin The ABC 100.0 5.2E-42 1.1E-46 378.6 26.3 218 329-553 17-234 (237)
161 TIGR00972 3a0107s01c2 phosphat 100.0 2.9E-42 6.2E-47 382.7 24.1 217 978-1204 2-233 (247)
162 PRK10744 pstB phosphate transp 100.0 5.4E-42 1.2E-46 383.1 26.3 220 975-1204 11-245 (260)
163 TIGR03265 PhnT2 putative 2-ami 100.0 2.5E-42 5.4E-47 398.1 23.9 217 977-1210 4-230 (353)
164 PRK13646 cbiO cobalt transport 100.0 4.1E-42 9E-47 388.4 25.0 220 978-1204 3-236 (286)
165 cd03296 ABC_CysA_sulfate_impor 100.0 4.6E-42 9.9E-47 379.2 24.4 211 978-1204 3-227 (239)
166 PRK09536 btuD corrinoid ABC tr 100.0 4E-42 8.6E-47 399.7 25.0 214 977-1204 3-229 (402)
167 cd03256 ABC_PhnC_transporter A 100.0 3.3E-42 7.1E-47 381.5 23.1 212 978-1202 1-233 (241)
168 cd03291 ABCC_CFTR1 The CFTR su 100.0 2.1E-41 4.5E-46 378.8 29.4 219 975-1214 37-256 (282)
169 cd03224 ABC_TM1139_LivF_branch 100.0 4.7E-42 1E-46 375.3 23.7 217 978-1203 1-221 (222)
170 PRK13643 cbiO cobalt transport 100.0 5.2E-42 1.1E-46 387.6 24.6 216 978-1203 2-233 (288)
171 cd03263 ABC_subfamily_A The AB 100.0 3.6E-42 7.8E-47 375.5 22.3 211 978-1201 1-219 (220)
172 TIGR00960 3a0501s02 Type II (G 100.0 2E-42 4.4E-47 376.2 20.3 203 978-1192 2-216 (216)
173 PRK13635 cbiO cobalt transport 100.0 4.8E-42 1E-46 386.1 23.9 216 977-1204 5-230 (279)
174 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.3E-42 9.3E-47 385.0 22.6 219 979-1212 26-258 (269)
175 PRK13634 cbiO cobalt transport 100.0 1.1E-41 2.4E-46 385.4 25.7 220 978-1204 3-236 (290)
176 PRK13642 cbiO cobalt transport 100.0 8.9E-42 1.9E-46 384.2 24.9 217 977-1204 4-230 (277)
177 cd03295 ABC_OpuCA_Osmoprotecti 100.0 7.3E-42 1.6E-46 378.3 23.7 218 978-1204 1-226 (242)
178 PRK14235 phosphate transporter 100.0 8.6E-42 1.9E-46 382.5 24.6 220 975-1204 17-252 (267)
179 TIGR02315 ABC_phnC phosphonate 100.0 6.1E-42 1.3E-46 379.7 23.1 212 978-1202 2-234 (243)
180 PRK09452 potA putrescine/sperm 100.0 8.8E-42 1.9E-46 395.1 25.4 212 977-1204 14-235 (375)
181 PRK10851 sulfate/thiosulfate t 100.0 6.7E-42 1.4E-46 394.6 24.1 212 977-1204 2-227 (353)
182 PRK14259 phosphate ABC transpo 100.0 1.6E-41 3.4E-46 380.5 26.2 219 976-1204 12-254 (269)
183 PRK14267 phosphate ABC transpo 100.0 7.4E-42 1.6E-46 381.1 23.3 218 977-1204 4-238 (253)
184 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.2E-41 2.5E-46 375.2 24.6 216 978-1204 2-222 (236)
185 PRK13636 cbiO cobalt transport 100.0 9.2E-42 2E-46 385.0 24.2 215 977-1204 5-232 (283)
186 cd03258 ABC_MetN_methionine_tr 100.0 7.6E-42 1.6E-46 376.3 22.9 216 978-1204 2-231 (233)
187 cd03259 ABC_Carb_Solutes_like 100.0 3.6E-42 7.9E-47 373.4 20.0 203 978-1196 1-213 (213)
188 PRK14248 phosphate ABC transpo 100.0 1.1E-41 2.3E-46 382.5 24.2 218 977-1204 21-253 (268)
189 cd03250 ABCC_MRP_domain1 Domai 100.0 1.3E-41 2.8E-46 366.3 23.8 200 978-1191 1-204 (204)
190 TIGR03258 PhnT 2-aminoethylpho 100.0 7.5E-42 1.6E-46 394.4 23.4 213 976-1204 4-229 (362)
191 PRK14247 phosphate ABC transpo 100.0 1.4E-41 2.9E-46 378.3 24.6 218 977-1204 3-235 (250)
192 PRK13651 cobalt transporter AT 100.0 1.7E-41 3.7E-46 384.6 25.6 217 977-1204 2-255 (305)
193 COG1127 Ttg2A ABC-type transpo 100.0 1.2E-41 2.7E-46 349.4 21.5 208 327-541 8-236 (263)
194 TIGR03005 ectoine_ehuA ectoine 100.0 1.5E-41 3.2E-46 378.2 24.0 217 978-1204 1-237 (252)
195 cd03218 ABC_YhbG The ABC trans 100.0 1.1E-41 2.3E-46 375.0 22.5 216 978-1203 1-222 (232)
196 COG3839 MalK ABC-type sugar tr 100.0 7.7E-42 1.7E-46 380.0 21.4 203 327-542 3-225 (338)
197 cd03266 ABC_NatA_sodium_export 100.0 1.3E-41 2.7E-46 370.7 22.7 207 978-1196 2-218 (218)
198 PRK14274 phosphate ABC transpo 100.0 2.1E-41 4.6E-46 378.3 25.0 218 977-1204 12-244 (259)
199 PRK11000 maltose/maltodextrin 100.0 1.4E-41 3E-46 395.2 24.2 212 977-1204 3-224 (369)
200 PRK14237 phosphate transporter 100.0 2.3E-41 4.9E-46 379.1 25.0 219 976-1204 19-252 (267)
201 COG1120 FepC ABC-type cobalami 100.0 7.1E-42 1.5E-46 366.3 19.8 203 328-541 3-229 (258)
202 PRK14268 phosphate ABC transpo 100.0 1.7E-41 3.6E-46 378.7 23.7 218 977-1204 12-243 (258)
203 PRK14239 phosphate transporter 100.0 2E-41 4.4E-46 377.5 24.4 218 977-1204 5-237 (252)
204 PRK13632 cbiO cobalt transport 100.0 1.8E-41 4E-46 380.7 24.1 216 977-1204 7-232 (271)
205 PRK15079 oligopeptide ABC tran 100.0 3.4E-41 7.4E-46 385.8 26.7 225 977-1212 8-259 (331)
206 PRK13537 nodulation ABC transp 100.0 1.4E-41 3.1E-46 386.3 23.5 217 977-1204 7-228 (306)
207 cd03264 ABC_drug_resistance_li 100.0 1.4E-41 2.9E-46 368.3 22.1 203 978-1196 1-211 (211)
208 PRK11264 putative amino-acid A 100.0 4.3E-41 9.2E-46 374.4 26.6 218 977-1204 3-234 (250)
209 PRK14251 phosphate ABC transpo 100.0 1.5E-41 3.3E-46 378.1 22.9 218 977-1204 4-236 (251)
210 PRK14249 phosphate ABC transpo 100.0 3.4E-41 7.4E-46 375.1 25.7 218 977-1204 4-236 (251)
211 PRK13633 cobalt transporter AT 100.0 2E-41 4.4E-46 381.9 23.9 217 977-1204 4-234 (280)
212 cd03226 ABC_cobalt_CbiO_domain 100.0 8.2E-42 1.8E-46 368.1 19.8 199 979-1193 1-205 (205)
213 PRK13640 cbiO cobalt transport 100.0 2.7E-41 5.8E-46 381.0 24.9 217 976-1204 4-233 (282)
214 PRK14240 phosphate transporter 100.0 3.3E-41 7.2E-46 375.1 25.3 219 976-1204 2-235 (250)
215 COG1118 CysA ABC-type sulfate/ 100.0 7.1E-42 1.5E-46 362.0 18.5 216 977-1209 2-232 (345)
216 PRK14244 phosphate ABC transpo 100.0 1.2E-41 2.5E-46 378.8 21.3 222 978-1210 6-243 (251)
217 PRK14236 phosphate transporter 100.0 2.9E-41 6.3E-46 379.3 24.8 220 975-1204 23-257 (272)
218 cd03265 ABC_DrrA DrrA is the A 100.0 1.9E-41 4.1E-46 369.6 22.6 209 978-1201 1-219 (220)
219 PRK10070 glycine betaine trans 100.0 1.7E-41 3.8E-46 394.1 23.7 211 994-1215 42-266 (400)
220 PRK13652 cbiO cobalt transport 100.0 2.4E-41 5.2E-46 380.7 24.1 215 977-1204 3-228 (277)
221 PRK11629 lolD lipoprotein tran 100.0 2.3E-41 5.1E-46 372.0 23.5 210 977-1197 5-228 (233)
222 cd03268 ABC_BcrA_bacitracin_re 100.0 2E-41 4.3E-46 366.1 22.4 203 978-1196 1-208 (208)
223 cd03247 ABCC_cytochrome_bd The 100.0 1.7E-41 3.8E-46 356.7 21.2 178 978-1196 1-178 (178)
224 TIGR03410 urea_trans_UrtE urea 100.0 1.5E-41 3.3E-46 373.1 21.7 211 978-1201 1-219 (230)
225 PRK14262 phosphate ABC transpo 100.0 2.3E-41 4.9E-46 376.4 23.4 226 977-1213 3-243 (250)
226 PRK09493 glnQ glutamine ABC tr 100.0 4.6E-41 1E-45 371.6 25.5 217 978-1204 2-226 (240)
227 PRK10575 iron-hydroxamate tran 100.0 2.2E-41 4.8E-46 379.0 23.1 213 977-1203 11-237 (265)
228 PRK14256 phosphate ABC transpo 100.0 3.6E-41 7.7E-46 375.1 24.6 219 976-1204 3-237 (252)
229 PRK13644 cbiO cobalt transport 100.0 3.2E-41 7E-46 378.7 24.4 214 978-1204 2-225 (274)
230 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.2E-41 2.6E-46 370.8 20.3 208 978-1192 1-218 (218)
231 PRK10619 histidine/lysine/argi 100.0 3.7E-41 8E-46 375.9 24.4 215 976-1204 4-242 (257)
232 PRK14245 phosphate ABC transpo 100.0 2.4E-41 5.2E-46 376.0 22.7 218 977-1204 3-235 (250)
233 PRK11614 livF leucine/isoleuci 100.0 4.7E-41 1E-45 370.8 24.8 218 977-1203 5-226 (237)
234 cd03288 ABCC_SUR2 The SUR doma 100.0 1E-40 2.2E-45 372.0 27.7 228 323-554 15-254 (257)
235 TIGR03411 urea_trans_UrtD urea 100.0 3.4E-41 7.3E-46 373.4 23.6 222 977-1203 2-231 (242)
236 PRK11831 putative ABC transpor 100.0 3.6E-41 7.9E-46 377.8 24.1 224 977-1215 7-244 (269)
237 PRK14243 phosphate transporter 100.0 5.7E-41 1.2E-45 375.2 25.5 218 977-1204 10-249 (264)
238 cd03253 ABCC_ATM1_transporter 100.0 7.4E-41 1.6E-45 369.3 26.2 218 329-553 16-233 (236)
239 PRK14238 phosphate transporter 100.0 8.1E-41 1.8E-45 375.2 26.5 218 977-1204 24-256 (271)
240 cd03251 ABCC_MsbA MsbA is an e 100.0 8.2E-41 1.8E-45 368.4 26.0 210 329-541 17-226 (234)
241 cd03254 ABCC_Glucan_exporter_l 100.0 1E-40 2.2E-45 366.5 26.5 215 327-541 2-227 (229)
242 PRK11231 fecE iron-dicitrate t 100.0 3.1E-41 6.6E-46 376.1 22.7 220 978-1214 3-235 (255)
243 TIGR02769 nickel_nikE nickel i 100.0 4.7E-41 1E-45 376.4 24.1 229 978-1214 3-250 (265)
244 PRK14271 phosphate ABC transpo 100.0 9.3E-41 2E-45 375.1 26.4 218 977-1204 21-252 (276)
245 TIGR02211 LolD_lipo_ex lipopro 100.0 3.4E-41 7.4E-46 368.1 22.1 209 978-1193 2-220 (221)
246 PRK13649 cbiO cobalt transport 100.0 7.9E-41 1.7E-45 377.9 25.7 220 978-1204 3-235 (280)
247 cd03293 ABC_NrtD_SsuB_transpor 100.0 2.8E-41 6E-46 368.2 21.3 205 978-1198 1-218 (220)
248 PRK11308 dppF dipeptide transp 100.0 4.5E-41 9.8E-46 384.6 24.0 226 977-1213 5-253 (327)
249 cd03301 ABC_MalK_N The N-termi 100.0 2.6E-41 5.6E-46 366.8 20.9 203 978-1196 1-213 (213)
250 PRK11607 potG putrescine trans 100.0 5.1E-41 1.1E-45 389.6 24.5 213 976-1204 18-240 (377)
251 PRK10895 lipopolysaccharide AB 100.0 5.3E-41 1.1E-45 371.4 23.5 218 977-1204 3-227 (241)
252 PRK14261 phosphate ABC transpo 100.0 6.8E-41 1.5E-45 373.1 24.4 227 977-1214 6-247 (253)
253 PRK13641 cbiO cobalt transport 100.0 9.3E-41 2E-45 377.6 25.8 221 977-1204 2-235 (287)
254 PRK14260 phosphate ABC transpo 100.0 6E-41 1.3E-45 374.5 23.8 219 976-1204 6-244 (259)
255 PRK14252 phosphate ABC transpo 100.0 8.5E-41 1.8E-45 374.5 24.9 222 973-1204 12-250 (265)
256 PRK11247 ssuB aliphatic sulfon 100.0 6.6E-41 1.4E-45 371.2 23.8 204 977-1199 12-219 (257)
257 PRK15112 antimicrobial peptide 100.0 8.8E-41 1.9E-45 374.3 24.8 231 977-1218 4-254 (267)
258 PRK14270 phosphate ABC transpo 100.0 8.1E-41 1.8E-45 372.0 24.4 218 977-1204 4-236 (251)
259 COG3842 PotA ABC-type spermidi 100.0 1.4E-41 3.1E-46 379.9 18.2 203 327-542 5-228 (352)
260 PRK14254 phosphate ABC transpo 100.0 1.1E-40 2.4E-45 376.0 25.4 219 976-1204 38-270 (285)
261 PRK13645 cbiO cobalt transport 100.0 7.5E-41 1.6E-45 379.4 24.0 222 976-1203 5-240 (289)
262 PRK14266 phosphate ABC transpo 100.0 1.2E-40 2.5E-45 370.8 25.0 218 977-1204 3-235 (250)
263 TIGR02673 FtsE cell division A 100.0 3.6E-41 7.8E-46 366.0 20.4 201 978-1191 2-214 (214)
264 PRK09473 oppD oligopeptide tra 100.0 6.1E-41 1.3E-45 384.0 23.4 228 977-1213 12-260 (330)
265 cd03290 ABCC_SUR1_N The SUR do 100.0 1.1E-40 2.3E-45 363.0 24.0 210 979-1191 2-218 (218)
266 PRK13548 hmuV hemin importer A 100.0 1.2E-40 2.7E-45 371.2 25.0 212 978-1203 3-230 (258)
267 PRK11022 dppD dipeptide transp 100.0 7.3E-41 1.6E-45 383.1 23.8 228 977-1213 3-252 (326)
268 cd03225 ABC_cobalt_CbiO_domain 100.0 4.2E-41 9.1E-46 364.6 20.5 201 979-1191 1-211 (211)
269 COG1116 TauB ABC-type nitrate/ 100.0 6.3E-41 1.4E-45 350.9 21.0 191 328-530 4-212 (248)
270 PRK13648 cbiO cobalt transport 100.0 1.2E-40 2.6E-45 374.0 24.9 216 977-1204 7-232 (269)
271 COG1136 SalX ABC-type antimicr 100.0 8.7E-41 1.9E-45 350.9 21.8 193 329-531 20-222 (226)
272 TIGR01288 nodI ATP-binding ABC 100.0 7.5E-41 1.6E-45 381.4 23.2 217 977-1204 4-225 (303)
273 PRK11124 artP arginine transpo 100.0 9.8E-41 2.1E-45 369.5 23.4 216 978-1203 3-230 (242)
274 PRK11300 livG leucine/isoleuci 100.0 1.3E-40 2.7E-45 371.8 24.4 220 977-1203 5-243 (255)
275 TIGR03415 ABC_choXWV_ATP choli 100.0 6.4E-41 1.4E-45 386.5 22.6 208 993-1212 37-262 (382)
276 PRK14253 phosphate ABC transpo 100.0 1.5E-40 3.2E-45 369.6 24.7 218 977-1204 3-234 (249)
277 PRK13638 cbiO cobalt transport 100.0 8.9E-41 1.9E-45 375.4 23.1 213 978-1204 2-226 (271)
278 cd03292 ABC_FtsE_transporter F 100.0 6.5E-41 1.4E-45 364.1 21.2 202 978-1192 1-214 (214)
279 PRK14241 phosphate transporter 100.0 1.2E-40 2.6E-45 372.0 23.9 218 977-1204 4-243 (258)
280 TIGR03522 GldA_ABC_ATP gliding 100.0 1.1E-40 2.4E-45 379.2 23.7 216 978-1204 3-222 (301)
281 PRK10247 putative ABC transpor 100.0 7.2E-41 1.6E-45 365.7 21.2 209 977-1199 7-223 (225)
282 TIGR00968 3a0106s01 sulfate AB 100.0 1.6E-40 3.5E-45 365.9 24.1 211 978-1204 1-221 (237)
283 PRK00349 uvrA excinuclease ABC 100.0 4.2E-40 9.1E-45 414.2 31.0 100 1105-1204 818-928 (943)
284 PRK14275 phosphate ABC transpo 100.0 1.8E-40 3.8E-45 374.8 24.9 219 976-1204 38-271 (286)
285 cd03300 ABC_PotA_N PotA is an 100.0 7.8E-41 1.7E-45 367.4 21.4 211 978-1204 1-221 (232)
286 PRK10253 iron-enterobactin tra 100.0 1.7E-40 3.7E-45 371.8 24.6 213 977-1203 7-233 (265)
287 cd03235 ABC_Metallic_Cations A 100.0 5.2E-41 1.1E-45 364.3 19.6 198 979-1196 1-213 (213)
288 PRK13536 nodulation factor exp 100.0 1.3E-40 2.7E-45 382.0 23.8 217 977-1204 41-262 (340)
289 PRK14265 phosphate ABC transpo 100.0 3.2E-40 6.8E-45 370.7 26.5 219 976-1204 19-259 (274)
290 PRK14263 phosphate ABC transpo 100.0 2E-40 4.3E-45 369.6 24.6 218 977-1204 8-246 (261)
291 cd03257 ABC_NikE_OppD_transpor 100.0 1.3E-40 2.8E-45 365.6 22.7 212 978-1196 2-228 (228)
292 TIGR03873 F420-0_ABC_ATP propo 100.0 1.5E-40 3.2E-45 370.8 23.4 212 978-1203 2-226 (256)
293 cd03246 ABCC_Protease_Secretio 100.0 1.1E-40 2.5E-45 348.6 21.0 172 978-1192 1-173 (173)
294 PRK14258 phosphate ABC transpo 100.0 2E-40 4.4E-45 370.4 24.3 219 976-1204 6-246 (261)
295 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.6E-40 3.4E-45 360.0 22.6 201 978-1196 1-211 (211)
296 PRK10584 putative ABC transpor 100.0 1.8E-40 3.9E-45 364.0 23.3 208 977-1195 6-227 (228)
297 PRK10908 cell division protein 100.0 1.6E-40 3.5E-45 362.7 22.7 204 978-1194 2-217 (222)
298 COG3638 ABC-type phosphate/pho 100.0 7.5E-41 1.6E-45 342.8 18.6 212 327-540 3-237 (258)
299 PRK14272 phosphate ABC transpo 100.0 2.3E-40 5E-45 369.0 23.9 224 977-1211 4-243 (252)
300 PRK10771 thiQ thiamine transpo 100.0 3.1E-40 6.7E-45 362.9 24.3 209 978-1204 2-220 (232)
301 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 4.8E-40 1E-44 363.1 25.9 211 328-541 17-227 (238)
302 cd03269 ABC_putative_ATPase Th 100.0 1.2E-40 2.6E-45 360.6 20.3 205 978-1196 1-210 (210)
303 COG1122 CbiO ABC-type cobalt t 100.0 2.3E-40 5E-45 356.0 22.2 208 327-541 3-229 (235)
304 PRK14246 phosphate ABC transpo 100.0 2.9E-40 6.2E-45 367.5 23.8 227 977-1214 10-251 (257)
305 PRK14255 phosphate ABC transpo 100.0 2.4E-40 5.2E-45 368.7 23.2 218 977-1204 5-237 (252)
306 PRK13639 cbiO cobalt transport 100.0 2.6E-40 5.7E-45 371.8 23.7 214 978-1204 2-227 (275)
307 PRK14264 phosphate ABC transpo 100.0 3.2E-40 6.9E-45 375.9 24.7 219 976-1204 44-290 (305)
308 cd03244 ABCC_MRP_domain2 Domai 100.0 5.8E-40 1.3E-44 358.4 25.6 207 327-534 2-220 (221)
309 PRK11701 phnK phosphonate C-P 100.0 4.2E-40 9.1E-45 367.7 24.8 226 977-1213 6-250 (258)
310 PRK11144 modC molybdate transp 100.0 2.5E-40 5.4E-45 383.3 23.5 210 978-1204 2-219 (352)
311 PRK13547 hmuV hemin importer A 100.0 3.8E-40 8.3E-45 368.2 24.0 212 978-1203 2-244 (272)
312 cd03262 ABC_HisP_GlnQ_permease 100.0 1.5E-40 3.3E-45 360.9 20.1 205 978-1192 1-213 (213)
313 cd03299 ABC_ModC_like Archeal 100.0 4.6E-40 1E-44 361.8 23.9 210 978-1204 1-220 (235)
314 PRK15093 antimicrobial peptide 100.0 4.7E-40 1E-44 377.9 24.2 228 977-1213 3-257 (330)
315 cd03234 ABCG_White The White s 100.0 2.5E-40 5.5E-45 362.0 20.9 215 977-1196 3-226 (226)
316 PRK10418 nikD nickel transport 100.0 5.4E-40 1.2E-44 365.6 23.7 227 977-1217 4-244 (254)
317 TIGR02314 ABC_MetN D-methionin 100.0 5.4E-40 1.2E-44 375.7 23.9 203 329-541 20-231 (343)
318 COG1124 DppF ABC-type dipeptid 100.0 3.3E-40 7.2E-45 341.3 19.8 190 342-541 32-232 (252)
319 COG4555 NatA ABC-type Na+ tran 100.0 1.2E-40 2.5E-45 331.2 15.7 217 978-1204 2-223 (245)
320 COG2884 FtsE Predicted ATPase 100.0 2.7E-40 5.8E-45 326.1 18.1 196 328-534 2-220 (223)
321 TIGR01277 thiQ thiamine ABC tr 100.0 7.9E-40 1.7E-44 354.7 22.9 202 978-1197 1-212 (213)
322 PRK10419 nikE nickel transport 100.0 9.6E-40 2.1E-44 365.9 24.3 230 977-1215 3-251 (268)
323 TIGR01978 sufC FeS assembly AT 100.0 5.7E-40 1.2E-44 364.1 22.3 216 978-1203 1-234 (243)
324 TIGR01188 drrA daunorubicin re 100.0 4.1E-40 8.8E-45 375.2 21.5 200 993-1204 6-214 (302)
325 cd03245 ABCC_bacteriocin_expor 100.0 1.7E-39 3.7E-44 354.4 25.6 192 342-533 29-220 (220)
326 COG0410 LivF ABC-type branched 100.0 1.1E-39 2.3E-44 335.4 22.3 220 977-1204 3-227 (237)
327 TIGR01186 proV glycine betaine 100.0 8.2E-40 1.8E-44 376.0 23.8 205 327-541 6-220 (363)
328 PRK09984 phosphonate/organopho 100.0 1.2E-39 2.6E-44 364.9 24.5 222 977-1216 4-251 (262)
329 PRK13631 cbiO cobalt transport 100.0 1.7E-39 3.6E-44 370.5 26.1 208 327-541 21-266 (320)
330 COG1118 CysA ABC-type sulfate/ 100.0 2.3E-40 5E-45 350.5 17.1 206 331-542 19-229 (345)
331 COG1131 CcmA ABC-type multidru 100.0 9.1E-40 2E-44 367.6 22.3 214 977-1204 4-227 (293)
332 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 1.7E-39 3.6E-44 345.8 22.5 200 327-541 4-228 (254)
333 PRK11248 tauB taurine transpor 100.0 1.4E-39 2.9E-44 361.6 22.2 202 978-1198 2-215 (255)
334 cd03233 ABC_PDR_domain1 The pl 100.0 1.5E-39 3.3E-44 348.6 21.6 191 977-1196 3-202 (202)
335 TIGR02142 modC_ABC molybdenum 100.0 1.9E-39 4.1E-44 376.6 24.1 207 982-1204 4-222 (354)
336 cd03261 ABC_Org_Solvent_Resist 100.0 2.9E-39 6.3E-44 356.1 24.4 203 329-541 15-227 (235)
337 COG4178 ABC-type uncharacteriz 100.0 3.4E-36 7.3E-41 353.9 51.5 435 70-525 107-587 (604)
338 TIGR02982 heterocyst_DevA ABC 100.0 1.7E-39 3.6E-44 354.1 21.7 208 978-1192 2-219 (220)
339 cd03230 ABC_DR_subfamily_A Thi 100.0 2.1E-39 4.5E-44 339.1 20.4 170 978-1192 1-173 (173)
340 cd03229 ABC_Class3 This class 100.0 2.3E-39 4.9E-44 340.4 20.5 172 978-1191 1-178 (178)
341 cd03248 ABCC_TAP TAP, the Tran 100.0 4.4E-39 9.5E-44 352.6 23.5 206 324-529 8-226 (226)
342 TIGR02323 CP_lyasePhnK phospho 100.0 5.1E-39 1.1E-43 358.2 24.3 226 977-1213 3-247 (253)
343 PRK00635 excinuclease ABC subu 100.0 2.9E-38 6.2E-43 411.3 34.8 212 977-1204 600-907 (1809)
344 PRK11650 ugpC glycerol-3-phosp 100.0 3.6E-39 7.8E-44 372.3 23.7 191 342-541 29-225 (356)
345 PRK11432 fbpC ferric transport 100.0 4.5E-39 9.7E-44 370.3 24.4 206 327-541 6-227 (351)
346 cd03228 ABCC_MRP_Like The MRP 100.0 3.1E-39 6.6E-44 337.1 20.8 171 978-1191 1-171 (171)
347 TIGR03265 PhnT2 putative 2-ami 100.0 3.5E-39 7.6E-44 372.0 22.7 205 328-541 5-225 (353)
348 TIGR03740 galliderm_ABC gallid 100.0 4E-39 8.7E-44 352.0 22.0 205 978-1200 1-210 (223)
349 COG4175 ProV ABC-type proline/ 100.0 1.9E-39 4.1E-44 343.1 18.4 228 977-1215 4-266 (386)
350 cd03297 ABC_ModC_molybdenum_tr 100.0 5.6E-39 1.2E-43 348.5 21.8 204 979-1196 3-214 (214)
351 cd03219 ABC_Mj1267_LivG_branch 100.0 5.2E-39 1.1E-43 354.6 21.8 207 329-540 15-232 (236)
352 cd03213 ABCG_EPDR ABCG transpo 100.0 4.9E-39 1.1E-43 342.4 20.6 183 977-1196 3-194 (194)
353 COG1245 Predicted ATPase, RNas 100.0 4.1E-38 8.8E-43 346.4 28.2 170 996-1189 352-531 (591)
354 cd03260 ABC_PstB_phosphate_tra 100.0 4.2E-39 9.1E-44 353.0 20.5 200 329-538 15-227 (227)
355 COG4619 ABC-type uncharacteriz 100.0 1.8E-39 3.8E-44 312.5 15.0 191 992-1192 15-212 (223)
356 COG0444 DppD ABC-type dipeptid 100.0 4.3E-39 9.4E-44 348.7 19.8 227 978-1213 2-252 (316)
357 PRK09544 znuC high-affinity zi 100.0 1.5E-38 3.2E-43 351.9 24.0 208 977-1214 4-217 (251)
358 cd03232 ABC_PDR_domain2 The pl 100.0 5.7E-39 1.2E-43 341.5 20.0 182 977-1196 3-192 (192)
359 PRK14269 phosphate ABC transpo 100.0 9.7E-39 2.1E-43 354.0 22.6 203 329-541 17-231 (246)
360 cd03215 ABC_Carb_Monos_II This 100.0 5.6E-39 1.2E-43 338.8 19.6 172 977-1192 4-182 (182)
361 cd03223 ABCD_peroxisomal_ALDP 100.0 1E-38 2.2E-43 330.9 21.0 164 978-1191 1-164 (166)
362 PRK09580 sufC cysteine desulfu 100.0 9.1E-39 2E-43 355.4 21.6 220 978-1202 2-234 (248)
363 PRK15056 manganese/iron transp 100.0 1.2E-38 2.5E-43 358.2 22.6 210 977-1203 6-230 (272)
364 TIGR03258 PhnT 2-aminoethylpho 100.0 1.1E-38 2.3E-43 368.2 22.3 207 326-541 4-229 (362)
365 cd03217 ABC_FeS_Assembly ABC-t 100.0 1.5E-38 3.3E-43 340.5 21.9 185 978-1202 1-192 (200)
366 COG4175 ProV ABC-type proline/ 100.0 6.9E-39 1.5E-43 338.9 18.2 206 327-542 41-256 (386)
367 PRK14250 phosphate ABC transpo 100.0 4E-38 8.6E-43 347.8 24.8 200 330-541 19-222 (241)
368 PRK10851 sulfate/thiosulfate t 100.0 2.1E-38 4.6E-43 365.5 23.5 200 330-541 18-227 (353)
369 cd03256 ABC_PhnC_transporter A 100.0 2.4E-38 5.2E-43 350.6 23.0 206 329-539 16-233 (241)
370 TIGR00630 uvra excinuclease AB 100.0 2.6E-37 5.5E-42 388.4 34.9 103 435-539 470-582 (924)
371 PRK11153 metN DL-methionine tr 100.0 1.9E-38 4.2E-43 366.1 22.8 203 329-541 20-231 (343)
372 CHL00131 ycf16 sulfate ABC tra 100.0 2.9E-38 6.3E-43 352.1 23.3 212 977-1201 7-239 (252)
373 cd03258 ABC_MetN_methionine_tr 100.0 2.3E-38 5.1E-43 348.5 22.1 203 328-540 19-230 (233)
374 PRK13637 cbiO cobalt transport 100.0 5.2E-38 1.1E-42 354.9 25.3 202 329-540 22-234 (287)
375 COG1137 YhbG ABC-type (unclass 100.0 3.6E-39 7.8E-44 320.2 13.7 222 977-1204 4-229 (243)
376 PRK09452 potA putrescine/sperm 100.0 2.7E-38 5.8E-43 366.1 23.3 206 327-541 14-235 (375)
377 COG0411 LivG ABC-type branched 100.0 1.3E-38 2.8E-43 329.9 18.5 218 977-1204 4-240 (250)
378 TIGR03608 L_ocin_972_ABC putat 100.0 1.2E-38 2.7E-43 344.1 19.0 194 980-1187 1-206 (206)
379 cd03224 ABC_TM1139_LivF_branch 100.0 2.9E-38 6.3E-43 345.4 22.1 202 329-539 15-220 (222)
380 PRK13650 cbiO cobalt transport 100.0 4E-38 8.7E-43 354.6 23.7 193 342-541 32-230 (279)
381 cd03296 ABC_CysA_sulfate_impor 100.0 2.6E-38 5.7E-43 349.2 21.6 201 329-541 17-227 (239)
382 TIGR02315 ABC_phnC phosphonate 100.0 4.2E-38 9E-43 349.0 23.2 206 329-539 17-234 (243)
383 PRK13646 cbiO cobalt transport 100.0 6.2E-38 1.3E-42 354.4 24.7 193 342-541 32-236 (286)
384 TIGR00972 3a0107s01c2 phosphat 100.0 4E-38 8.6E-43 349.6 22.5 202 330-541 17-233 (247)
385 PRK09536 btuD corrinoid ABC tr 100.0 5.6E-38 1.2E-42 365.1 24.7 211 328-541 4-229 (402)
386 TIGR02770 nickel_nikD nickel i 100.0 2.4E-38 5.2E-43 347.2 20.4 207 995-1212 1-223 (230)
387 PRK14242 phosphate transporter 100.0 3.4E-38 7.3E-43 351.6 21.9 207 328-541 7-238 (253)
388 PRK03695 vitamin B12-transport 100.0 4.7E-38 1E-42 348.4 22.8 210 979-1203 2-222 (248)
389 PRK13643 cbiO cobalt transport 100.0 4.7E-38 1E-42 355.4 23.1 193 342-541 31-234 (288)
390 cd03214 ABC_Iron-Siderophores_ 100.0 2.2E-38 4.8E-43 333.6 18.9 177 979-1196 1-180 (180)
391 PRK14273 phosphate ABC transpo 100.0 9.4E-38 2E-42 348.1 25.0 208 327-541 7-239 (254)
392 KOG0060 Long-chain acyl-CoA tr 100.0 1.7E-35 3.7E-40 335.6 43.5 484 690-1189 122-641 (659)
393 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.5E-38 7.6E-43 348.9 21.4 203 329-541 16-226 (242)
394 PRK13647 cbiO cobalt transport 100.0 7.5E-38 1.6E-42 351.5 24.3 204 328-538 5-225 (274)
395 cd03369 ABCC_NFT1 Domain 2 of 100.0 1.2E-37 2.5E-42 336.4 24.5 190 326-534 5-206 (207)
396 cd03231 ABC_CcmA_heme_exporter 100.0 5.4E-38 1.2E-42 336.8 21.7 195 978-1187 1-198 (201)
397 cd03259 ABC_Carb_Solutes_like 100.0 3.1E-38 6.7E-43 342.6 20.0 193 329-533 15-213 (213)
398 PRK11000 maltose/maltodextrin 100.0 5E-38 1.1E-42 365.5 23.0 200 330-541 19-224 (369)
399 cd03218 ABC_YhbG The ABC trans 100.0 5E-38 1.1E-42 345.8 21.8 202 329-540 15-222 (232)
400 PRK10744 pstB phosphate transp 100.0 9.4E-38 2E-42 348.9 24.2 211 326-541 12-245 (260)
401 cd03291 ABCC_CFTR1 The CFTR su 100.0 3.8E-37 8.3E-42 344.4 28.8 225 299-541 15-248 (282)
402 COG4559 ABC-type hemin transpo 100.0 6.5E-38 1.4E-42 314.1 20.1 213 978-1204 2-231 (259)
403 cd03263 ABC_subfamily_A The AB 100.0 4.2E-38 9.1E-43 343.5 20.6 199 329-538 17-219 (220)
404 PRK13634 cbiO cobalt transport 100.0 1E-37 2.3E-42 353.0 24.3 193 342-541 32-236 (290)
405 PRK13651 cobalt transporter AT 100.0 9.9E-38 2.1E-42 353.9 23.8 193 342-541 32-255 (305)
406 cd03216 ABC_Carb_Monos_I This 100.0 8.1E-38 1.8E-42 323.1 21.1 159 978-1194 1-162 (163)
407 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 9.5E-38 2.1E-42 344.1 22.9 202 329-541 16-222 (236)
408 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 4.3E-38 9.3E-43 342.9 19.3 192 328-529 18-218 (218)
409 TIGR00960 3a0501s02 Type II (G 100.0 5.8E-38 1.3E-42 341.2 20.1 191 329-529 18-216 (216)
410 PRK14235 phosphate transporter 100.0 1.1E-37 2.5E-42 349.2 22.9 209 326-541 18-252 (267)
411 TIGR03415 ABC_choXWV_ATP choli 100.0 1.1E-37 2.4E-42 359.6 23.5 206 326-541 36-255 (382)
412 PRK11607 potG putrescine trans 100.0 9.9E-38 2.2E-42 362.1 22.9 206 327-541 19-240 (377)
413 TIGR01184 ntrCD nitrate transp 100.0 7.8E-38 1.7E-42 342.8 20.8 191 996-1202 1-203 (230)
414 cd03266 ABC_NatA_sodium_export 100.0 7.4E-38 1.6E-42 341.0 20.5 194 329-533 20-218 (218)
415 PRK13549 xylose transporter AT 100.0 8.8E-38 1.9E-42 382.2 23.6 216 977-1202 5-231 (506)
416 COG1123 ATPase components of v 100.0 8.4E-38 1.8E-42 363.0 21.8 228 977-1214 5-254 (539)
417 PRK14267 phosphate ABC transpo 100.0 1.4E-37 3.1E-42 346.6 22.6 209 328-541 5-238 (253)
418 PRK13636 cbiO cobalt transport 100.0 1.9E-37 4.2E-42 349.8 23.9 207 328-541 6-232 (283)
419 PRK11614 livF leucine/isoleuci 100.0 1.8E-37 4E-42 342.2 23.1 207 328-540 6-226 (237)
420 PRK14247 phosphate ABC transpo 100.0 1.6E-37 3.5E-42 345.6 22.8 202 330-541 19-235 (250)
421 PRK15439 autoinducer 2 ABC tra 100.0 2E-37 4.3E-42 378.7 25.7 213 977-1203 11-229 (510)
422 PRK13635 cbiO cobalt transport 100.0 1.7E-37 3.7E-42 349.2 23.1 207 328-541 6-230 (279)
423 cd03264 ABC_drug_resistance_li 100.0 7E-38 1.5E-42 339.3 19.1 193 329-533 15-211 (211)
424 PRK11831 putative ABC transpor 100.0 1.6E-37 3.4E-42 348.4 22.4 207 328-541 8-234 (269)
425 cd03265 ABC_DrrA DrrA is the A 100.0 1.3E-37 2.7E-42 339.4 20.8 199 329-538 15-219 (220)
426 PRK13537 nodulation ABC transp 100.0 1.5E-37 3.2E-42 353.4 22.3 207 327-541 7-228 (306)
427 cd03226 ABC_cobalt_CbiO_domain 100.0 1.2E-37 2.6E-42 335.7 20.1 185 329-530 15-205 (205)
428 PRK09493 glnQ glutamine ABC tr 100.0 1.8E-37 3.9E-42 342.9 21.8 203 329-541 16-226 (240)
429 TIGR03411 urea_trans_UrtD urea 100.0 3.2E-37 7E-42 341.5 23.8 207 329-540 17-231 (242)
430 PRK09700 D-allose transporter 100.0 2.1E-37 4.6E-42 379.5 24.4 217 977-1203 5-234 (510)
431 PRK13538 cytochrome c biogenes 100.0 1.8E-37 3.8E-42 333.8 20.7 195 978-1187 2-202 (204)
432 PRK11144 modC molybdate transp 100.0 2.2E-37 4.9E-42 358.6 23.2 196 332-541 16-219 (352)
433 PRK10895 lipopolysaccharide AB 100.0 2.7E-37 5.9E-42 341.7 22.8 202 329-540 18-226 (241)
434 COG4608 AppF ABC-type oligopep 100.0 1.3E-37 2.8E-42 330.5 19.1 197 977-1214 4-209 (268)
435 PRK11629 lolD lipoprotein tran 100.0 2.7E-37 5.9E-42 339.8 22.5 186 342-534 34-228 (233)
436 PRK13652 cbiO cobalt transport 100.0 4.4E-37 9.6E-42 346.1 24.6 202 330-541 20-228 (277)
437 cd03267 ABC_NatA_like Similar 100.0 1.3E-37 2.8E-42 342.4 19.7 196 993-1196 34-236 (236)
438 PRK11264 putative amino-acid A 100.0 2.1E-37 4.5E-42 344.8 21.5 202 330-541 19-234 (250)
439 PRK14274 phosphate ABC transpo 100.0 3.2E-37 7E-42 344.6 23.1 209 328-541 13-244 (259)
440 PRK10070 glycine betaine trans 100.0 3.7E-37 7.9E-42 358.0 24.5 205 327-541 41-255 (400)
441 COG4598 HisP ABC-type histidin 100.0 1.1E-37 2.4E-42 302.9 16.6 222 977-1213 6-251 (256)
442 TIGR03005 ectoine_ehuA ectoine 100.0 3E-37 6.4E-42 343.7 22.5 203 329-541 15-237 (252)
443 PRK14240 phosphate transporter 100.0 4.1E-37 8.9E-42 342.3 23.7 208 327-541 3-235 (250)
444 PRK13642 cbiO cobalt transport 100.0 4.5E-37 9.8E-42 346.0 24.2 207 328-541 5-230 (277)
445 TIGR03410 urea_trans_UrtE urea 100.0 2.1E-37 4.5E-42 340.3 21.0 201 329-539 15-220 (230)
446 PRK14236 phosphate transporter 100.0 3.3E-37 7.1E-42 346.4 22.9 209 326-541 24-257 (272)
447 cd03298 ABC_ThiQ_thiamine_tran 100.0 3E-37 6.4E-42 334.4 21.7 183 342-533 23-211 (211)
448 PRK10762 D-ribose transporter 100.0 2.4E-37 5.3E-42 377.9 23.6 216 977-1202 4-229 (501)
449 PRK14259 phosphate ABC transpo 100.0 4.4E-37 9.5E-42 344.6 23.7 208 327-541 13-254 (269)
450 cd03250 ABCC_MRP_domain1 Domai 100.0 4E-37 8.6E-42 331.4 22.4 184 328-528 19-204 (204)
451 TIGR01288 nodI ATP-binding ABC 100.0 3E-37 6.4E-42 351.8 22.6 206 328-541 5-225 (303)
452 PRK13540 cytochrome c biogenes 100.0 2.4E-37 5.2E-42 331.7 20.5 194 978-1186 2-198 (200)
453 cd03268 ABC_BcrA_bacitracin_re 100.0 2.1E-37 4.5E-42 334.8 20.1 189 329-533 15-208 (208)
454 TIGR02211 LolD_lipo_ex lipopro 100.0 2.9E-37 6.2E-42 337.2 21.3 192 329-530 20-220 (221)
455 PRK13632 cbiO cobalt transport 100.0 5E-37 1.1E-41 344.8 23.8 208 327-541 7-232 (271)
456 TIGR01188 drrA daunorubicin re 100.0 2.9E-37 6.2E-42 351.8 22.1 203 328-541 7-214 (302)
457 PRK11300 livG leucine/isoleuci 100.0 4.7E-37 1E-41 343.0 23.4 211 328-540 6-243 (255)
458 PRK10575 iron-hydroxamate tran 100.0 3.3E-37 7.1E-42 345.3 22.2 212 327-540 11-237 (265)
459 PRK10619 histidine/lysine/argi 100.0 3.4E-37 7.5E-42 344.0 22.0 208 327-541 5-242 (257)
460 PRK14239 phosphate transporter 100.0 3.6E-37 7.9E-42 343.3 22.1 209 328-541 6-237 (252)
461 PRK15079 oligopeptide ABC tran 100.0 3E-37 6.6E-42 353.2 22.0 203 329-541 36-252 (331)
462 TIGR02769 nickel_nikE nickel i 100.0 3.8E-37 8.3E-42 344.8 22.4 203 329-541 26-241 (265)
463 PRK13645 cbiO cobalt transport 100.0 5.3E-37 1.1E-41 347.9 23.8 209 326-541 5-241 (289)
464 PRK14251 phosphate ABC transpo 100.0 3.4E-37 7.3E-42 343.2 21.8 207 328-541 5-236 (251)
465 PRK13649 cbiO cobalt transport 100.0 6.6E-37 1.4E-41 345.9 24.4 202 330-541 23-235 (280)
466 PRK10771 thiQ thiamine transpo 100.0 6.2E-37 1.3E-41 336.7 23.4 206 328-541 2-220 (232)
467 PRK13644 cbiO cobalt transport 100.0 5.2E-37 1.1E-41 344.7 23.3 202 330-541 18-225 (274)
468 PRK14268 phosphate ABC transpo 100.0 5.8E-37 1.3E-41 342.1 23.5 210 327-541 12-243 (258)
469 cd03257 ABC_NikE_OppD_transpor 100.0 3.7E-37 7.9E-42 338.2 21.6 196 329-533 20-228 (228)
470 COG0410 LivF ABC-type branched 100.0 5.9E-37 1.3E-41 315.2 21.6 203 331-541 20-227 (237)
471 cd03293 ABC_NrtD_SsuB_transpor 100.0 2E-37 4.4E-42 337.8 19.4 193 328-535 18-218 (220)
472 cd03294 ABC_Pro_Gly_Bertaine T 100.0 4.1E-37 9E-42 344.8 22.4 204 328-541 38-251 (269)
473 PRK14248 phosphate ABC transpo 100.0 4.4E-37 9.6E-42 345.1 22.6 210 327-541 21-253 (268)
474 PRK14245 phosphate ABC transpo 100.0 2.7E-37 5.8E-42 343.6 20.7 204 330-541 19-235 (250)
475 PRK13543 cytochrome c biogenes 100.0 4.5E-37 9.7E-42 333.1 21.7 196 977-1189 11-212 (214)
476 PRK11231 fecE iron-dicitrate t 100.0 4.7E-37 1E-41 342.5 22.3 202 329-540 17-227 (255)
477 PRK11288 araG L-arabinose tran 100.0 4.2E-37 9E-42 375.8 24.0 212 977-1198 4-224 (501)
478 PRK13638 cbiO cobalt transport 100.0 8.1E-37 1.8E-41 343.3 24.4 207 328-541 2-226 (271)
479 TIGR03522 GldA_ABC_ATP gliding 100.0 3.7E-37 7.9E-42 350.4 21.8 202 329-541 17-222 (301)
480 PRK11124 artP arginine transpo 100.0 3.9E-37 8.5E-42 340.7 21.4 201 330-540 18-230 (242)
481 PRK14237 phosphate transporter 100.0 5.3E-37 1.2E-41 343.8 22.7 209 326-541 19-252 (267)
482 PRK10982 galactose/methyl gala 100.0 3.3E-37 7.1E-42 376.1 22.7 213 980-1202 1-222 (491)
483 PRK11247 ssuB aliphatic sulfon 100.0 5.8E-37 1.3E-41 339.7 22.5 194 327-536 12-219 (257)
484 PRK10247 putative ABC transpor 100.0 3.4E-37 7.3E-42 336.8 20.2 200 328-536 8-223 (225)
485 PRK14243 phosphate transporter 100.0 8.4E-37 1.8E-41 341.6 23.9 207 328-541 11-249 (264)
486 PRK13536 nodulation factor exp 100.0 5.1E-37 1.1E-41 352.2 22.6 207 327-541 41-262 (340)
487 cd03225 ABC_cobalt_CbiO_domain 100.0 3.2E-37 6.9E-42 334.2 19.8 191 328-528 15-211 (211)
488 PRK13641 cbiO cobalt transport 100.0 6.3E-37 1.4E-41 346.3 23.0 192 342-540 32-234 (287)
489 cd03301 ABC_MalK_N The N-termi 100.0 3.5E-37 7.6E-42 334.5 20.1 193 329-533 15-213 (213)
490 COG4555 NatA ABC-type Na+ tran 100.0 1.8E-37 3.9E-42 308.5 16.1 204 329-541 17-223 (245)
491 PRK13640 cbiO cobalt transport 100.0 7.5E-37 1.6E-41 344.8 23.4 208 327-541 5-233 (282)
492 PRK14249 phosphate ABC transpo 100.0 9.8E-37 2.1E-41 339.3 23.8 208 327-541 4-236 (251)
493 PRK13548 hmuV hemin importer A 100.0 1E-36 2.2E-41 339.8 23.8 202 329-540 17-230 (258)
494 PRK13648 cbiO cobalt transport 100.0 9.4E-37 2E-41 342.4 23.7 208 327-541 7-232 (269)
495 PRK14256 phosphate ABC transpo 100.0 1.1E-36 2.4E-41 339.0 24.1 211 326-541 3-237 (252)
496 PRK14238 phosphate transporter 100.0 1.1E-36 2.4E-41 341.7 23.8 211 327-541 24-256 (271)
497 PRK14261 phosphate ABC transpo 100.0 9.5E-37 2.1E-41 339.8 23.1 209 328-541 7-238 (253)
498 PRK13633 cobalt transporter AT 100.0 7.6E-37 1.6E-41 344.7 22.3 193 342-541 35-234 (280)
499 PRK14244 phosphate ABC transpo 100.0 3.4E-37 7.4E-42 342.9 19.3 203 329-541 20-238 (251)
500 PRK14271 phosphate ABC transpo 100.0 1.5E-36 3.3E-41 340.9 24.6 210 327-541 21-252 (276)
No 1
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-214 Score=1948.90 Aligned_cols=1185 Identities=47% Similarity=0.766 Sum_probs=1078.6
Q ss_pred chHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCC-hH---HHHHHH--------HH---HHHHHH
Q 047171 3 TKGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSD-IS---ISIEAV--------DK---VPEKGM 67 (1224)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~---~~~~~~--------~~---~~~~~~ 67 (1224)
.+.++|+|..++++.+++++++++++.++..|++.+++|+++|.+...+ .. ...... .. .|++..
T Consensus 14 ~~~~lf~~a~~~D~~Lm~~G~i~a~~~G~~~P~~~ii~g~~~~~~~~~~~~~~~~~~~~~~l~~~~lg~~~~~~~~~q~~ 93 (1228)
T KOG0055|consen 14 SFFKLFRFADRFDYLLMILGSIGAIAHGLGLPLMSIIFGKLTDVLGDNTNKIASSEVSKVALYFVYLGVGVFISGFIQVS 93 (1228)
T ss_pred chHHheeccchhhHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678999999999999999999999999999999999999999875432 11 111000 00 178899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 047171 68 CWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLL 147 (1224)
Q Consensus 68 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (1224)
||.+.++|+..++|.++++.+++++++|||. + .+|++.+++++|++.|++.+++.+..+++.+.++++++++.|+.
T Consensus 94 c~~~~geRq~~riR~~yl~~iLrQdi~~fD~---~-~~g~~~~~l~~d~~~I~d~~geKvg~~i~~~~~fi~g~ii~F~~ 169 (1228)
T KOG0055|consen 94 CWMRTGERQTARIRSKYLKAILRQDIGWFDT---N-STGELVTRLSDDIELIQDAIGEKVGNFIQLLATFIAGFVIGFYY 169 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCccceeec---c-cccceEEEecCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998 5 77999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 047171 148 SWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIK 227 (1224)
Q Consensus 148 ~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 227 (1224)
.|+|+++++.+.|++++....+.+.+.+...+++++++++.++++|+++++|||.+|+.|+.+.+||.+.++...+...+
T Consensus 170 ~W~Ltlv~l~~~Pli~~~g~~~a~~~~~~t~ke~~~ya~Ag~iaEe~i~~iRTV~af~gq~~e~~ry~~~L~~~~k~gi~ 249 (1228)
T KOG0055|consen 170 GWKLTLVMLSFIPLIAIAGGLLARFLSKLTEKEQEAYAKAGSIAEEVISSIRTVYAFNGEKKEIERYSKALENALKFGIK 249 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 047171 228 QGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMID 306 (1224)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~ 306 (1224)
...+.++..+++ ++.+..+++.+|||+.++..+..++|++++++++++.....+++..|.+..+..|.+|+.+|+++++
T Consensus 250 ~g~~~G~~~G~~~~~~~~~~a~~~WyG~~li~~~~~~~g~v~~v~~~vl~g~~sLgqa~p~l~~f~~a~~aa~~I~~~i~ 329 (1228)
T KOG0055|consen 250 KGLFKGLGLGFTFFLLFASYALAFWYGSTLILNGGYNGGDVITVFFSVLIGGMSLGQASPHLSAFAKARAAAYRIFETID 329 (1228)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceEEEEEeehhhhhhhhhccccchHHHhccccchHHHHHHhc
Confidence 999999999988 8899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCcccccccccccccEEEEeEEEECCCCC-------------CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 047171 307 RVPVINSEDEIGKTLAYLRGEIEFKDVDFSYPTRP-------------DTPTIGLVGSSGSGKSTVISLLERFYDPVKGN 373 (1224)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~-------------~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 373 (1224)
..|+++.....+......+|+|+|+||+|+||.+| +|+++||||||||||||+++||.|||+|++|+
T Consensus 330 ~~~~i~~~~~~~~~~~~~~g~ief~nV~FsYPsRpdv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~~G~ 409 (1228)
T KOG0055|consen 330 RKPSIDPYSKGGRVLSSIKGEIEFRNVCFSYPSRPDVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPTSGE 409 (1228)
T ss_pred CCCCCCcccccCCcccccccceEEEEEEecCCCCCcchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCce
Confidence 99887654422334456789999999999999875 45699999999999999999999999999999
Q ss_pred EEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCC
Q 047171 374 ILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQ 453 (1224)
Q Consensus 374 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 453 (1224)
|++||.|+++++.+|||++||+|.|||.||++||+|||+||+|+++.+++.+||+++++++||.+||+||||.+||+|.+
T Consensus 410 V~idG~di~~~~~~~lr~~iglV~QePvlF~~tI~eNI~~G~~dat~~~i~~a~k~ana~~fi~~lp~g~~T~vge~g~q 489 (1228)
T KOG0055|consen 410 VLIDGEDIRNLNLKWLRSQIGLVSQEPVLFATTIRENIRYGKPDATREEIEEAAKAANAHDFILKLPDGYDTLVGERGVQ 489 (1228)
T ss_pred EEEcCccchhcchHHHHhhcCeeeechhhhcccHHHHHhcCCCcccHHHHHHHHHHccHHHHHHhhHHhhcccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeec
Q 047171 454 LSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESG 533 (1224)
Q Consensus 454 LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g 533 (1224)
|||||||||||||||++||+||||||||||||+++|+.+|++|+++++|||+|+|||||+++++||+|+||++|+|+|.|
T Consensus 490 LSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~grTTivVaHRLStIrnaD~I~v~~~G~IvE~G 569 (1228)
T KOG0055|consen 490 LSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASKGRTTIVVAHRLSTIRNADKIAVMEEGKIVEQG 569 (1228)
T ss_pred CChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhcCCeEEEEeeehhhhhccCEEEEEECCEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHhhccCCCchHHHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCcccccc
Q 047171 534 SHDVLMQMNNGEGGAYSKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMT 613 (1224)
Q Consensus 534 ~~~~l~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (1224)
+|+||++. +|.|.++++.|+.....+..+.+.........+. . .+. ...+..+. .........
T Consensus 570 ~h~ELi~~----~G~Y~~lv~~Q~~~~~~~~~~~~~~~~~~~~~s~----~-~s~--~~~~~~~~-----~~~~~~~~~- 632 (1228)
T KOG0055|consen 570 THDELIAL----GGIYSSLVRLQELEKAAEDEEEEESLKEERSRSL----K-SSS--SSPSLSRG-----SNRSNLLSV- 632 (1228)
T ss_pred CHHHHHhc----cchHHHHHHHHhhhhhhhccccccchhhhhhhcc----c-ccc--ccccccCC-----ccccccccc-
Confidence 99999998 7999999999976553321000000000000000 0 000 00000000 000000000
Q ss_pred CcccccccccccCccCCCCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhH
Q 047171 614 GSFQMHSVENQNDKNFHDNSHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSET 693 (1224)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1224)
...++...+.. .....+.++++++++.+++|+++++|++++++.|+.+|++++.++.++..+...+++......
T Consensus 633 -----~~~~e~~~~~~-~~~~~~~s~~~i~k~~~pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~ 706 (1228)
T KOG0055|consen 633 -----KPEGEDPEEPV-SEEDEKVSFWRIFKLNKPEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREV 706 (1228)
T ss_pred -----ccccccccccc-ccccccccHHHHHHhccchhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHH
Confidence 00000000100 112256789999999999999999999999999999999999999999999876665555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHH
Q 047171 694 RLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADR 773 (1224)
Q Consensus 694 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~ 773 (1224)
..|+++|+++++...+..++++|+|..++++++.++|.++|+++++++++|||.++|+ |.|.+|+++|+..++..+++.
T Consensus 707 ~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~Da~~vr~~v~~r 785 (1228)
T KOG0055|consen 707 RAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATDASNVRAAVGDR 785 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcchHHHHHHHHHH
Confidence 6699999999999999999999999999999999999999999999999999999999 999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhcc
Q 047171 774 MSLLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSS 853 (1224)
Q Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~ 853 (1224)
+..+++++.+++.+++++|+++|+++++++++.|++++..+.+.+++.....+.++..++..+...|++++++||++|+.
T Consensus 786 l~~vv~~~~~~~~~iiiaf~~~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~ 865 (1228)
T KOG0055|consen 786 LSLVVQNIAAVIIGIIIAFIYGWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCA 865 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 047171 854 QDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAG 933 (1224)
Q Consensus 854 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~ 933 (1224)
|+++.+.|.+.++...+...+++++.++.+++++++.+++.++++|||++++.+|.+++.+++.+++.+.+....+++..
T Consensus 866 e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~ 945 (1228)
T KOG0055|consen 866 EEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQAS 945 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEc
Q 047171 934 SMTSDIAKGSSAIRTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVG 1013 (1224)
Q Consensus 934 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG 1013 (1224)
.+.|++.++..|+.++++++++++.+++..+.+. ..++.+|+|+|+||+|+||+||+.+||+|+||+|++||++||||
T Consensus 946 s~~Pd~~ka~~Aa~~iF~i~dr~~~i~~~~~~~~--~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG 1023 (1228)
T KOG0055|consen 946 SYAPDISKAKIAAGSIFEILDRKPTIDPDSTSGG--KLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVG 1023 (1228)
T ss_pred hhCcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCC--ccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEEC
Confidence 9999999999999999999999987765432221 33456899999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHH
Q 047171 1014 QSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLA 1093 (1224)
Q Consensus 1014 ~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a 1093 (1224)
||||||||++.||.|||+|.+|.|.|||+|++++++++||++||+|+|||.||++||||||.||.+.++++||.+||+.|
T Consensus 1024 ~SGsGKSTvI~LLeRfYdp~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~A 1103 (1228)
T KOG0055|consen 1024 PSGSGKSTVISLLERFYDPDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLA 1103 (1228)
T ss_pred CCCCCHHHHHHHHHHhcCCCCCeEEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999996568999999999999
Q ss_pred hHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEcc
Q 047171 1094 NAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAH 1173 (1224)
Q Consensus 1094 ~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaH 1173 (1224)
++|+||.+||+||||.|||+|.+||||||||||||||++|||+||||||||||||.++|+.||++|++...|||+|+|||
T Consensus 1104 NaH~FI~sLP~GyDT~vGerG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAH 1183 (1228)
T KOG0055|consen 1104 NAHNFISSLPQGYDTRVGERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAH 1183 (1228)
T ss_pred hhHHHHhcCcCcccCccCcccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHHhhc
Q 047171 1174 RLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKMQAS 1219 (1224)
Q Consensus 1174 rl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~ 1219 (1224)
||+||++||.|+|+++|+|+|+|||+||+++ +|.|++|++.|..
T Consensus 1184 RLSTIqnaD~I~Vi~~G~VvE~GtH~~L~~~--~G~Y~~Lv~~q~~ 1227 (1228)
T KOG0055|consen 1184 RLSTIQNADVIAVLKNGKVVEQGTHDELLAK--RGIYFRLVQLQSS 1227 (1228)
T ss_pred chhhhhcCCEEEEEECCEEEecccHHHHHhC--CCchHHHhhhccC
Confidence 9999999999999999999999999999996 9999999998864
No 2
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=2e-171 Score=1691.51 Aligned_cols=1199 Identities=31% Similarity=0.483 Sum_probs=995.9
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC-ChHHHHH-HH----HH---HHHHHHHHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTS-DISISIE-AV----DK---VPEKGMCWTRTAE 74 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~-~~----~~---~~~~~~~~~~~~~ 74 (1224)
+.++|+|..+.++.+++++++++++.+++.|++|+++++++|.+... ....+.. .+ .. .+++.+++.++++
T Consensus 47 ~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~p~~~~i~g~iid~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 126 (1466)
T PTZ00265 47 FFLPFKCLPASHRKLLGVSFVCATISGGTLPFFVSVFGVIMKNMNLGENVNDIIFSLVLIGIFQFILSFISSFCMDVVTT 126 (1466)
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67899999888788889999999999999999999999999986422 1111110 00 01 1778889999999
Q ss_pred HHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 047171 75 RQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALA 154 (1224)
Q Consensus 75 ~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 154 (1224)
++..++|.++|+|++++|.+|||+ . ++|++++++++|++.+++.+...+..++..+++++++++++|+++|+|+++
T Consensus 127 ~~~~~lR~~~~~~ll~~~~~~fd~---~-~~~~l~s~l~~d~~~i~~~i~~~~~~~~~~~~~~i~~~i~~~~~sw~Lalv 202 (1466)
T PTZ00265 127 KILKTLKLEFLKSVFYQDGQFHDN---N-PGSKLTSDLDFYLEQVNAGIGTKFITIFTYASAFLGLYIWSLFKNARLTLC 202 (1466)
T ss_pred HHHHHHHHHHHHHHHCCCHHHHcC---C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999998 5 899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 155 ALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGL 234 (1224)
Q Consensus 155 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (1224)
+++++|+++++..++.+++++..++.++..++.++.++|.++|+++||+|+.|+.+.++|++..+++.+...+.....++
T Consensus 203 ~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~f~~~~~~~~~~~~k~~~~~~~ 282 (1466)
T PTZ00265 203 ITCVFPLIYICGVICNKKVKINKKTSLLYNNNTMSIIEEALVGIRTVVSYCGEKTILKKFNLSEKLYSKYILKANFMESL 282 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999899999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHhc--------CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 047171 235 LLGSM-GMTYGAWAFQSWVGSVLVTER--------GEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMI 305 (1224)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~~g~~~~~~~--------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l 305 (1224)
..++. ++.++++++++|+|++++.+| .+++|.+++++++.+....++..+.+.+..++++.+|++|+++++
T Consensus 283 ~~~~~~~~~~~~~~l~~~~G~~lv~~g~~~~~~~~~~t~g~v~~~~~~~l~~~~~l~~i~~~~~~~~~a~~a~~ri~~ii 362 (1466)
T PTZ00265 283 HIGMINGFILASYAFGFWYGTRIIISDLSNQQPNNDFHGGSVISILLGVLISMFMLTIILPNITEYMKSLEATNSLYEII 362 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777 777888899999999999885 578999999888877777777788888999999999999999999
Q ss_pred ccCCCCCCCcccccccccccccEEEEeEEEECCCC-------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 047171 306 DRVPVINSEDEIGKTLAYLRGEIEFKDVDFSYPTR-------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKG 372 (1224)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 372 (1224)
+.+|+++... .+...+. .+.|+|+||+|+|+++ ++|+++|||||||||||||+++|+|+|+|++|
T Consensus 363 ~~~~~~~~~~-~~~~~~~-~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G 440 (1466)
T PTZ00265 363 NRKPLVENND-DGKKLKD-IKKIQFKNVRFHYDTRKDVEIYKDLNFTLTEGKTYAFVGESGCGKSTILKLIERLYDPTEG 440 (1466)
T ss_pred cCCCCCCCCC-CCccCCC-CCcEEEEEEEEEcCCCCCCceeccceEEEcCCCEEEEECCCCCCHHHHHHHHHHhccCCCC
Confidence 9877654321 1122222 2479999999999853 24669999999999999999999999999999
Q ss_pred EEEE-CCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCC-----------------------------------
Q 047171 373 NILL-DGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKP----------------------------------- 416 (1224)
Q Consensus 373 ~i~~-~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~----------------------------------- 416 (1224)
+|++ ||+++++++..++|++||||+|+|.||++||+|||.+|.+
T Consensus 441 ~I~i~~g~~i~~~~~~~lr~~Ig~V~Q~~~LF~~TI~eNI~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 520 (1466)
T PTZ00265 441 DIIINDSHNLKDINLKWWRSKIGVVSQDPLLFSNSIKNNIKYSLYSLKDLEALSNYYNEDGNDSQENKNKRNSCRAKCAG 520 (1466)
T ss_pred eEEEeCCcchhhCCHHHHHHhccEecccccchhccHHHHHHhcCCCccccchhccccccccccccccccccccccccccc
Confidence 9999 5799999999999999999999999999999999999742
Q ss_pred ----------------------CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 417 ----------------------GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 417 ----------------------~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
++++++++++|+.+++++|+.++|+||||.+|++|.+|||||||||+|||||+++|+|
T Consensus 521 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~a~~~~~l~~~i~~lp~g~dT~vg~~g~~LSGGQkQRiaIARAll~~P~I 600 (1466)
T PTZ00265 521 DLNDMSNTTDSNELIEMRKNYQTIKDSEVVDVSKKVLIHDFVSALPDKYETLVGSNASKLSGGQKQRISIARAIIRNPKI 600 (1466)
T ss_pred hhhhcccccchhhhhhcccccccCCHHHHHHHHHHhCcHHHHHhCccccCceeCCCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 2456889999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhccCEEEEEeCc-------------------------
Q 047171 475 LLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQSG------------------------- 527 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G------------------------- 527 (1224)
||||||||+||+++++.+++.|+++. +|+|+|+||||+++++.||+|++|++|
T Consensus 601 LlLDEpTSaLD~~se~~i~~~L~~~~~~~g~TvIiIsHrls~i~~aD~Iivl~~g~~g~~~~~~~~~~~~~~~~~~~~~~ 680 (1466)
T PTZ00265 601 LILDEATSSLDNKSEYLVQKTINNLKGNENRITIIIAHRLSTIRYANTIFVLSNRERGSTVDVDIIGEDPTKDNKENNNK 680 (1466)
T ss_pred EEEeCcccccCHHHHHHHHHHHHHHhhcCCCEEEEEeCCHHHHHhCCEEEEEeCCccccccccccccccccccccccccc
Confidence 99999999999999999999999875 489999999999999999999999986
Q ss_pred ----------------------eEEeecChHHHHhhccCCCchHHHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCC
Q 047171 528 ----------------------RVIESGSHDVLMQMNNGEGGAYSKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQT 585 (1224)
Q Consensus 528 ----------------------~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (1224)
+|+|+|+|+||++.. +|.|+.+++.|..................+..........
T Consensus 681 ~~~~~~~~~~~~~~~~~~~~g~~ive~Gth~~L~~~~---~g~y~~l~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 757 (1466)
T PTZ00265 681 NNKDDNNNNNNNNNNKINNAGSYIIEQGTHDALMKNK---NGIYYTMINNQKVSSKKSSNNDNDKDSDMKSSAYKDSERG 757 (1466)
T ss_pred cccccccccccccccccccCCceeEeeCCHHHHHhcc---CCcHHHHHhhhccccccccccccccccccccccccccccc
Confidence 599999999999732 8999999988754321110000000000000000000000
Q ss_pred C-CCCCCCCCCCCCCCCCCCCCCccccccCcccccccccc-cC---ccC-CCCCCCchHHHHHHHHhhHHHHHHHHHHHH
Q 047171 586 P-HTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQ-ND---KNF-HDNSHSPSSLLRLLRMSAIEWKRTLLGCLG 659 (1224)
Q Consensus 586 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (1224)
. ................ ... ...+... .....+.. .. ++. ......+..++++++..++.++.+++++++
T Consensus 758 ~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 833 (1466)
T PTZ00265 758 YDPDEMNGNSKHENESAS--NKK-SCKMSDE-NASENNAGGKLPFLRNLFKRKPKAPNNLRIVYREIFSYKKDVTIIALS 833 (1466)
T ss_pred cccccccccccccccccc--ccc-ccccccc-cccchhccccchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000000000000000 000 0000000 00000000 00 000 000111223455556556666668888889
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 047171 660 SAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFT 739 (1224)
Q Consensus 660 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~ 739 (1224)
+++.+++.|+++++++.+++.++.. .........|++++++++++..++.+++.|+..++++++..++|.++|+++++
T Consensus 834 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~~~~~~~~~lR~~lf~~ll~ 911 (1466)
T PTZ00265 834 ILVAGGLYPVFALLYAKYVSTLFDF--ANLEANSNKYSLYILVIAIAMFISETLKNYYNNVIGEKVEKTMKRRLFENILY 911 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999876532 12223345678888888999999999999999999999999999999999999
Q ss_pred CCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 740 FEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVL 819 (1224)
Q Consensus 740 ~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~ 819 (1224)
+|++|||++++++|++++|+++|++.++..+...+..++..++.++++++++++++|.+++++++++|++..++....+.
T Consensus 912 ~~~~~fd~~~~~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l~l~~~~~~~~~~~~~~~~~~~ 991 (1466)
T PTZ00265 912 QEISFFDQDKHAPGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIVAAVLTGTYFIFMRVFAIRARL 991 (1466)
T ss_pred CCHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998789999999999999999999999999999999999999999999999999888766555444333222221
Q ss_pred HHH--HHHH-------------HHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Q 047171 820 MKS--MSEK-------------AKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLF 884 (1224)
Q Consensus 820 ~~~--~~~~-------------~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 884 (1224)
... ..+. .++..++....+.|++.|+++||+|+.|+++.++|.+..+...+...+.....++..+
T Consensus 992 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1071 (1466)
T PTZ00265 992 TANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNLIEKAIDYSNKGQKRKTLVNSMLWG 1071 (1466)
T ss_pred HHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 0101 1233556788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCC
Q 047171 885 SSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEIDPEDP 964 (1224)
Q Consensus 885 ~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~ 964 (1224)
+.+++..++.++++|+|++++..|.++++++++++.++++...++..+...++++.++..+++|++++++.+++.+..+.
T Consensus 1072 ~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~a~~a~~ri~~ll~~~~~~~~~~~ 1151 (1466)
T PTZ00265 1072 FSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSENAKLSFEKYYPLIIRKSNIDVRDN 1151 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcCCCCCC
Confidence 99999999999999999999999999999999988777776677888999999999999999999999987654322111
Q ss_pred CCCCC-CCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----------
Q 047171 965 KASED-IEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP----------- 1032 (1224)
Q Consensus 965 ~~~~~-~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p----------- 1032 (1224)
..... .++...|.|+|+||+|+||++++.+||+|+||+|+|||++|||||||||||||+++|+|||+|
T Consensus 1152 ~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~ 1231 (1466)
T PTZ00265 1152 GGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNE 1231 (1466)
T ss_pred cccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCccccccccccc
Confidence 11100 012235789999999999977667899999999999999999999999999999999999999
Q ss_pred -------------------------------------------CCceEEECCccCCCCCHHHHhcceEEEecCCCCCccc
Q 047171 1033 -------------------------------------------QSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGT 1069 (1224)
Q Consensus 1033 -------------------------------------------~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gT 1069 (1224)
++|+|++||+|++++++++||++|+||||||+||+||
T Consensus 1232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF~gT 1311 (1466)
T PTZ00265 1232 HTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLFNMS 1311 (1466)
T ss_pred cccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCcccccc
Confidence 6999999999999999999999999999999999999
Q ss_pred HHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCH
Q 047171 1070 IRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDS 1149 (1224)
Q Consensus 1070 IreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~ 1149 (1224)
|||||.+|+++++|+++++||+.|+++|||.+||+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||+
T Consensus 1312 IreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD~ 1391 (1466)
T PTZ00265 1312 IYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRIAIARALLREPKILLLDEATSSLDS 1391 (1466)
T ss_pred HHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeC----CEEE-EecChhHHhhcCCCchhHHHHHHhh
Q 047171 1150 ASENLVQEALEKMM--VGRTCVVVAHRLSTIQKADNIVVIKN----GKVV-EQGTQSSLLSMGNGGAYYSLIKMQA 1218 (1224)
Q Consensus 1150 ~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~aD~I~vl~~----G~Iv-e~Gt~~eLl~~~~~g~y~~l~~~q~ 1218 (1224)
+||+.|+++|++.. +++|+|+||||++++++||+|+||++ |+++ |+|||+||+++ .+|.|++||+.|+
T Consensus 1392 ~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~~-~~g~Y~~l~~~~~ 1466 (1466)
T PTZ00265 1392 NSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLSV-QDGVYKKYVKLAK 1466 (1466)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHhc-CCChHHHHHhhcC
Confidence 99999999999884 68999999999999999999999999 9954 99999999973 3899999998774
No 3
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.5e-161 Score=1514.82 Aligned_cols=1122 Identities=22% Similarity=0.279 Sum_probs=876.0
Q ss_pred HHHHHHHHHHHHhhhcCCCh---HHHHHHHHHH---HHHHH---HHHHHHHHHHHHHHHH----HHHHHHcCChhhhhcc
Q 047171 33 TPLTMYILSMVINELGTSDI---SISIEAVDKV---PEKGM---CWTRTAERQASRIRME----YLKSVLRQEVGFFDNQ 99 (1224)
Q Consensus 33 ~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~---~~~~~---~~~~~~~~~~~~lR~~----~~~~l~~~~~~~f~~~ 99 (1224)
.-..|.+++.+|+.+...+. ..+...+..+ +++.. .+.+...+++.++|.. +|+|.++++...-.+
T Consensus 217 ~~~~P~lL~~li~~~~~~~~~~~~g~~~a~~lf~~~~l~~l~~~~~~~~~~~~g~r~R~al~~~IY~K~L~ls~~~~~~- 295 (1381)
T KOG0054|consen 217 GFVGPLLLKKLILFFSEKRLPLNNGYLLAVLLFLASLLQSLLLHQYFFVSFRVGMRLRSALISAIYRKALRLSNSARGE- 295 (1381)
T ss_pred ccccHHHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHHHHHHhHHHHHHHhhhhhHHHHHHHHHHHhhhcCchhhccC-
Confidence 44455788999998765311 1122111111 22222 2345667777777776 567777777665544
Q ss_pred CCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 100 TSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALPFSLLFIVPGIVFGKVLKDLGAQ 179 (1224)
Q Consensus 100 ~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 179 (1224)
. ++|+++|.+++|++++.++.... ..+....+.+++++.+++..--.-+++.++++.+++++..+++++.++.+++
T Consensus 296 --~-t~G~ivNlms~D~~ri~~~~~~~-h~~w~~Plqi~~~l~lLy~~LG~sa~~G~~~~il~~p~n~~~a~~~~~~q~~ 371 (1381)
T KOG0054|consen 296 --T-TVGEIVNLMSVDAQRLSDAACFL-HLLWSAPLQIILALYLLYGLLGPSALAGVAVMVLLIPLNSFLAKKIAKFQKR 371 (1381)
T ss_pred --C-CcchhhhhhhhhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 89999999999999999985432 2333333333333333322211236777777888888999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH-H
Q 047171 180 GKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVL-V 257 (1224)
Q Consensus 180 ~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~-~ 257 (1224)
.++..|++...++|.++|||+||.|+||+.+.++..+.++++.+.-.|.....++..... ....+. ..+.++++. .
T Consensus 372 ~m~~~D~Rik~~nEiL~~IkviK~yaWE~~F~~~I~~~R~~El~~lrk~~~~~~~~~~~~~~~p~lv--~~~tF~~~v~~ 449 (1381)
T KOG0054|consen 372 LMKRKDERIKLMNEILNGIKVIKLYAWEKPFLKKIEDLRQKELKLLRKSAYLSALNSFLNFFSPVLV--SVVTFVVFVLL 449 (1381)
T ss_pred HhhhhhHHHHHHHHHHhhhHhhhhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999998888888877765544 222222 223344444 4
Q ss_pred HhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccccccccccccEEEEeEEEEC
Q 047171 258 TERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAYLRGEIEFKDVDFSY 337 (1224)
Q Consensus 258 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y 337 (1224)
..+.+++...|+.+.+...+-.|+..+...++.+.++.+|.+|+.+++..++..+. .....+....+..|+++|.+|+|
T Consensus 450 ~~~~lt~~~aF~slalfniLr~pl~~~P~~i~~~vqa~VS~~Ri~~fl~~~e~~~~-~~~~~~~~~~~~~i~i~~~sfsW 528 (1381)
T KOG0054|consen 450 LGNLLTASTAFTSLALFNILRFPLFMLPSVISQLVQAKVSLKRLKEFLLSEELDPD-SVERSPDEAGENAIEIKNGSFSW 528 (1381)
T ss_pred cCccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCcc-ccccCCCCCCCceEEEeeeeEec
Confidence 46678888899988888888899999888899999999999999999986543221 11101222233469999999999
Q ss_pred CCC-------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCc
Q 047171 338 PTR-------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFS 404 (1224)
Q Consensus 338 ~~~-------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~ 404 (1224)
++. +.|+.+||||+.|||||+|++.|+|+++..+|++.++| .++||||+||+|+
T Consensus 529 ~~~~~~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~sG~v~v~g-------------siaYv~Q~pWI~n 595 (1381)
T KOG0054|consen 529 DSESPEPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKLSGSVAVNG-------------SVAYVPQQPWIQN 595 (1381)
T ss_pred CCCCCcccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccccceEEEcC-------------eEEEeccccHhhC
Confidence 752 24568999999999999999999999999999999998 4999999999999
Q ss_pred ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCC
Q 047171 405 TSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSAL 484 (1224)
Q Consensus 405 ~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~l 484 (1224)
+||||||+||.| .+.++..++.+.|++.++++.||.|+.|.|||+|.+|||||||||+||||+|+|+||++||||+||+
T Consensus 596 gTvreNILFG~~-~d~~rY~~Vi~aC~L~~Dle~Lp~GD~TeIGErGinLSGGQKqRIsLARAVY~~adIYLLDDplSAV 674 (1381)
T KOG0054|consen 596 GTVRENILFGSP-YDEERYDKVIKACALKKDLEILPFGDLTEIGERGINLSGGQKQRISLARAVYQDADIYLLDDPLSAV 674 (1381)
T ss_pred CcHHHhhhcCcc-ccHHHHHHHHHHccCHhHHhhcCCCCcceecCCccCCcHhHHHHHHHHHHHhccCCEEEEcCcchhh
Confidence 999999999997 5788899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHH-HHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHHHHHhhhhh
Q 047171 485 DAESER-IVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQSAMRNE 563 (1224)
Q Consensus 485 D~~~~~-~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~~~~~~ 563 (1224)
|+++.+ .+.++++...++||+|+|||.++.+++||+|++|+||+|+++|+|+||++. ++.|.++..+...+...+
T Consensus 675 Dahvg~~if~~ci~~~L~~KT~ILVTHql~~L~~ad~Iivl~~G~I~~~Gty~el~~~----~~~~~~l~~~~~~~~~~~ 750 (1381)
T KOG0054|consen 675 DAHVGKHIFEECIRGLLRGKTVILVTHQLQFLPHADQIIVLKDGKIVESGTYEELLKS----GGDFAELAHEEESEQEEE 750 (1381)
T ss_pred hHhhhHHHHHHHHHhhhcCCEEEEEeCchhhhhhCCEEEEecCCeEecccCHHHHHhc----chhHHHHhhccchhhccc
Confidence 999865 567788778899999999999999999999999999999999999999987 778887743322211110
Q ss_pred cccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCc--cCCCCCCCchHHHH
Q 047171 564 VASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDK--NFHDNSHSPSSLLR 641 (1224)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 641 (1224)
. ................. ........ .+ .. ...+..+.+ +.++...+...+..
T Consensus 751 ~---~~~~~~~~~~~~~~~~~----~~~~~~~~---------~~---~~------~~~~~~~~~~~~~ee~~~G~v~~~v 805 (1381)
T KOG0054|consen 751 A---SEKDLESGESSRESESR----SLESLSSE---------EE---KS------KDEKEEEDKLVQEEERETGKVSWSV 805 (1381)
T ss_pred c---ccccccccccccchhhh----hhhhhccc---------cc---cc------ccccchhhHHHHHHHHhcCEeeHHH
Confidence 0 00000000000000000 00000000 00 00 000000000 00011233344444
Q ss_pred HHHHhhHHHHH--HHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhh--hhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 642 LLRMSAIEWKR--TLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLK--SETRLYCLIFLGLAFLTLIANLIQHYN 717 (1224)
Q Consensus 642 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~ 717 (1224)
|.+|.+..+.+ .++.+++..+...+.....+|++.|.+.-. .... .....|..+|.+++++..++.+++.+.
T Consensus 806 Y~~Y~~a~~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~----~~~~~~~~~~~~~~vY~~l~~~~~~~~~~rs~~ 881 (1381)
T KOG0054|consen 806 YKKYIKAAGGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGE----DNGTTTVSTSFYLGVYALLGVASSLLTLLRSFL 881 (1381)
T ss_pred HHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc----cccccCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444432222 222233333444444445555555543211 1111 345678999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 718 FAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWR 797 (1224)
Q Consensus 718 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1224)
+...+.+++..||+++++++++.||+||| .+|+|+|+|||++|++.+|..++..+..++..++.+++.++++.+..|.
T Consensus 882 ~~~~~l~aS~~Lh~~ml~~Ilrapm~FFd--tTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~ 959 (1381)
T KOG0054|consen 882 FAKGGLKASRKLHDKLLNSILRAPMSFFD--TTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPW 959 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcchhcC--CCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHH
Confidence 99999999999999999999999999999 7899999999999999999999999999999999999999988888775
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHH
Q 047171 798 VAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKK----SQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESI 873 (1224)
Q Consensus 798 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~ 873 (1224)
.. ++.+|+.+++++++.++.+. +++.++ .+++..+|++|++.|+.|||||+.+++|.+++....|.+.+..+
T Consensus 960 fl---i~~~pl~v~~~~~~~~Y~~t-sReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f 1035 (1381)
T KOG0054|consen 960 FL---IAIIPLGVIYYFVQRYYLAT-SRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENSRAFF 1035 (1381)
T ss_pred HH---HHHHHHHHHHHHHHHHHHHH-hHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHH
Confidence 54 44555555555555554443 444444 45678999999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 874 KQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTIL 953 (1224)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~ 953 (1224)
.......+...-.+++..+....+..++...-... .++|.+..++.+.+.....+..+.....++++.+.|++|+.+|.
T Consensus 1036 ~~~~a~RWla~Rle~ig~~~v~~~al~~vl~~~~~-~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~ 1114 (1381)
T KOG0054|consen 1036 LSISANRWLAVRLELLGNLVVLIAALFAVLLPSGL-ISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYT 1114 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC-CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHh
Confidence 66655555555556665555544444433332222 77899999999999988999999999999999999999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC
Q 047171 954 DRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ 1033 (1224)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~ 1033 (1224)
+.++|.+...+...+++.||..|.|+|+|++.+|.++ .++||+||||+|+||||||||||||||||||+++|+|+.+|.
T Consensus 1115 ~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~-lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~e~~ 1193 (1381)
T KOG0054|consen 1115 DIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPN-LPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLVEPA 1193 (1381)
T ss_pred cCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCC-CcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhcCcc
Confidence 9877722222122134678999999999999999643 467999999999999999999999999999999999999999
Q ss_pred CceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCC
Q 047171 1034 SGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGER 1113 (1224)
Q Consensus 1034 ~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~ 1113 (1224)
+|+|.|||+||.++++++||+++++|||||+||+||+|+||||.. +++|++||+|++.|++.++|.++|+|||++|.|+
T Consensus 1194 ~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf~-e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v~eg 1272 (1381)
T KOG0054|consen 1194 EGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPFD-EYSDDEIWEALERCQLKDVVSSLPGGLDSEVSEG 1272 (1381)
T ss_pred CCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCccc-ccCHHHHHHHHHHhChHHHHhhCCcCCCceecCC
Confidence 999999999999999999999999999999999999999999984 6799999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEE
Q 047171 1114 GVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVV 1193 (1224)
Q Consensus 1114 G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Iv 1193 (1224)
|.|||.||||.+||||||||+++||+|||||+++|++|+..||++|++.+++||||+||||++|+.+||||+|||+|+|+
T Consensus 1273 G~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G~v~ 1352 (1381)
T KOG0054|consen 1273 GENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAGRVV 1352 (1381)
T ss_pred CccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCCeEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecChhHHhhcCCCchhHHHHHHhhc
Q 047171 1194 EQGTQSSLLSMGNGGAYYSLIKMQAS 1219 (1224)
Q Consensus 1194 e~Gt~~eLl~~~~~g~y~~l~~~q~~ 1219 (1224)
|+|+|++|+++ +++.|++++.....
T Consensus 1353 EfdsP~~Ll~~-~~S~f~~~l~~~~~ 1377 (1381)
T KOG0054|consen 1353 EFDSPAELLSD-KDSLFSSLLKEAAL 1377 (1381)
T ss_pred ecCChHHHHhC-CcchHHHHHHHHHH
Confidence 99999999987 58999877766543
No 4
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=1.5e-155 Score=1554.36 Aligned_cols=1136 Identities=19% Similarity=0.252 Sum_probs=851.4
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChH--HHHHHHHHH--------HHHHHH--HHHHHHHHHHHHHHHHHH
Q 047171 19 LLFGTVGSIGDGMMTPLTMYILSMVINELGTSDIS--ISIEAVDKV--------PEKGMC--WTRTAERQASRIRMEYLK 86 (1224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--~~~~~~~~~--------~~~~~~--~~~~~~~~~~~lR~~~~~ 86 (1224)
+++++++.++..++....|++++.++|.+...+.. .+...+..+ +...+. ..+.+.++...+|..+|+
T Consensus 303 ~~~~~~~~i~~~~~~~~~P~ll~~li~~v~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~i~~ 382 (1622)
T PLN03130 303 FWLGGFFKIGNDLSQFVGPLLLNLLLESMQNGEPAWIGYIYAFSIFVGVVLGVLCEAQYFQNVMRVGFRLRSTLVAAVFR 382 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555556666667777788999999877543211 111111100 111121 235566677777778999
Q ss_pred HHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 047171 87 SVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALPFSLLFIVPG 166 (1224)
Q Consensus 87 ~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~ 166 (1224)
|+++++..++++ . ++|++++++++|++.+++++. .+..++..++.+++++++++..-...+++.++++.+++++.
T Consensus 383 k~L~l~~~~~~~---~-~~G~ivnl~s~Dv~~i~~~~~-~l~~l~~~pl~ii~~~~lL~~~lg~~~l~g~~v~~l~~~l~ 457 (1622)
T PLN03130 383 KSLRLTHEGRKK---F-TSGKITNLMTTDAEALQQICQ-QLHTLWSAPFRIIIAMVLLYQQLGVASLIGSLMLVLMFPIQ 457 (1622)
T ss_pred HHhcCChhhcCC---C-CHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999988 4 999999999999999999874 45556666665555555444322222233333344555566
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 167 IVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSMGMTYGAW 246 (1224)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1224)
.++.+++++..++.++..+++.+.+.|.++||++||+|+||+.+.+++.+.++++.+...+.....++...+.... ...
T Consensus 458 ~~~~~~~~~~~~~~~~~~d~r~~~~~E~L~gi~~IK~~~~E~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~-~~~ 536 (1622)
T PLN03130 458 TFIISKMQKLTKEGLQRTDKRIGLMNEVLAAMDTVKCYAWENSFQSKVQTVRDDELSWFRKAQLLSAFNSFILNSI-PVL 536 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 7788889999999999999999999999999999999999999999999988887777666665555433322111 113
Q ss_pred HHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccccccccccc
Q 047171 247 AFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAYLRG 326 (1224)
Q Consensus 247 ~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~ 326 (1224)
+.++++|++.+.+|.+|+|.+++++.+...+..|+..+...+..+.++.++++||.++++.++..+... . ......+
T Consensus 537 v~~~~fg~~~~~~g~Lt~g~vf~~l~l~~~l~~pl~~l~~~i~~~~~a~~s~~RI~~~L~~~e~~~~~~--~-~~~~~~~ 613 (1622)
T PLN03130 537 VTVVSFGVFTLLGGDLTPARAFTSLSLFAVLRFPLFMLPNLITQAVNANVSLKRLEELLLAEERVLLPN--P-PLEPGLP 613 (1622)
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccC--C-cccCCCC
Confidence 445678999999999999999999988888899999988889999999999999999997654322111 0 0111134
Q ss_pred cEEEEeEEEECCCC-------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC-cEEEECCEecCCCCHHHHhcc
Q 047171 327 EIEFKDVDFSYPTR-------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVK-GNILLDGHKIKKLQLKWLRSQ 392 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~-------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~-G~i~~~g~~~~~~~~~~~r~~ 392 (1224)
.|+++||+|+|++. ++|+.+|||||||||||||+++|+|+++|++ |+|.+ |++
T Consensus 614 ~I~~~nvsf~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~GG~I~l-------------~~~ 680 (1622)
T PLN03130 614 AISIKNGYFSWDSKAERPTLSNINLDVPVGSLVAIVGSTGEGKTSLISAMLGELPPRSDASVVI-------------RGT 680 (1622)
T ss_pred ceEEEeeEEEccCCCCCceeeceeEEecCCCEEEEECCCCCCHHHHHHHHHHhhccCCCceEEE-------------cCe
Confidence 69999999999742 2566999999999999999999999999999 99985 447
Q ss_pred cEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 047171 393 MGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDP 472 (1224)
Q Consensus 393 i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~ 472 (1224)
|+||+|+||||++||+|||+||+| .+++++.++++.|+++++++.||+|++|.+||+|.+|||||||||+||||+|++|
T Consensus 681 Iayv~Q~p~LfngTIreNI~fg~~-~d~e~y~~vl~a~~L~~di~~LP~Gd~T~IGe~G~~LSGGQKQRIaLARAly~~~ 759 (1622)
T PLN03130 681 VAYVPQVSWIFNATVRDNILFGSP-FDPERYERAIDVTALQHDLDLLPGGDLTEIGERGVNISGGQKQRVSMARAVYSNS 759 (1622)
T ss_pred EEEEcCccccCCCCHHHHHhCCCc-ccHHHHHHHHHHhCcHHHHHhCCCcccccccCCCCCCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999997 5789999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHH-HHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHHH
Q 047171 473 KILLLDEATSALDAESERIV-QEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSK 551 (1224)
Q Consensus 473 ~ililDE~ts~lD~~~~~~i-~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~ 551 (1224)
+||||||||||||+++++.+ ++++....+++|+|+||||++.++.||+|++|++|+|+++|+|+||++. ++.|.+
T Consensus 760 ~IlLLDEptSALD~~~~~~I~~~~l~~~l~~kTvIlVTH~l~~l~~aD~Ii~L~~G~i~e~Gt~~eL~~~----~~~~~~ 835 (1622)
T PLN03130 760 DVYIFDDPLSALDAHVGRQVFDKCIKDELRGKTRVLVTNQLHFLSQVDRIILVHEGMIKEEGTYEELSNN----GPLFQK 835 (1622)
T ss_pred CEEEECCCccccCHHHHHHHHHHHhhHHhcCCEEEEEECCHhHHHhCCEEEEEeCCEEEEeCCHHHHHhc----chhHHH
Confidence 99999999999999998876 5677777789999999999999999999999999999999999999987 788888
Q ss_pred HHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccCCC
Q 047171 552 MVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNFHD 631 (1224)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (1224)
+++.+....+.... .......+.. .. +. .......... ........... . ......+ +
T Consensus 836 l~~~~~~~~~~~~~--~~~~~~~~~~-----~~-~~-~~~~~~~~~~-----~~~~~~~~~~~----~-~~~~~~e---~ 893 (1622)
T PLN03130 836 LMENAGKMEEYVEE--NGEEEDDQTS-----SK-PV-ANGNANNLKK-----DSSSKKKSKEG----K-SVLIKQE---E 893 (1622)
T ss_pred HHHhcccccccccc--cccccccccc-----cc-cc-cccccccccc-----ccccccccccc----c-hhhhhHH---H
Confidence 87654321110000 0000000000 00 00 0000000000 00000000000 0 0000000 0
Q ss_pred CCCCchHHHHHHHHhhHH--HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHH
Q 047171 632 NSHSPSSLLRLLRMSAIE--WKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLI 709 (1224)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 709 (1224)
...+...+..+.+|.+.. ++..++.+++.++..++....+++++.|.+.... .......|.++|++++++..+
T Consensus 894 ~~~g~v~~~vy~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~~~~-----~~~~~~~~~~i~~~l~~~~~i 968 (1622)
T PLN03130 894 RETGVVSWKVLERYKNALGGAWVVMILFLCYVLTEVFRVSSSTWLSEWTDQGTP-----KTHGPLFYNLIYALLSFGQVL 968 (1622)
T ss_pred HhcCccCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----CCCchhHHHHHHHHHHHHHHH
Confidence 112222344444443331 1122222222333333334445555555442211 112234577788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 710 ANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYT 789 (1224)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~ 789 (1224)
+.+++.+++.+.+.++..++|.+++++++++|++||| .+++|+++||+++|++.++..++..+..++..++.+++.++
T Consensus 969 ~~~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd--~~~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i 1046 (1622)
T PLN03130 969 VTLLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFH--TNPLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFV 1046 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhc--cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 78899999999999999999999999999999988888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhh
Q 047171 790 LSLLVTWRVAIVMIAVQPLNIGCFYSR---SVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMK 866 (1224)
Q Consensus 790 ~~~~~~~~l~lv~l~~~pl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~ 866 (1224)
++++++|...+ +++|+.++++... .+..+...+......++..+++.|+++|++|||+|+.++++.+.+.+..+
T Consensus 1047 ~i~~~~~~~~~---~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~ 1123 (1622)
T PLN03130 1047 LIGIVSTISLW---AIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMD 1123 (1622)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHH
Confidence 87777764332 2333333222222 22223333334445567889999999999999999999999888888777
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 867 GPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQG-LVS-----PKQLFQAFFLLMSTGKNIADAGSMTSDIA 940 (1224)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-~~t-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 940 (1224)
...+..+.......+......++.. +++++.+...+..+ ... .+.+..++.+......++..+...+..++
T Consensus 1124 ~~~~~~~~~~~~~~wl~~~l~~~~~---~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e 1200 (1622)
T PLN03130 1124 NNIRFTLVNMSSNRWLAIRLETLGG---LMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAE 1200 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7666544433333232222222221 11222222323322 111 23344444455555667777778888999
Q ss_pred HHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChH
Q 047171 941 KGSSAIRTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKS 1020 (1224)
Q Consensus 941 ~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKS 1020 (1224)
.++.+++|+.++++.++|.+........+..||..|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||||
T Consensus 1201 ~~~~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~VL~~is~~I~~GekVaIVGrSGSGKS 1279 (1622)
T PLN03130 1201 NSLNAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPE-LPPVLHGLSFEISPSEKVGIVGRTGAGKS 1279 (1622)
T ss_pred HHHHHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CCceecceeEEEcCCCEEEEECCCCCCHH
Confidence 99999999999998776543211111111235667899999999999643 34799999999999999999999999999
Q ss_pred HHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHH
Q 047171 1021 TIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFIS 1100 (1224)
Q Consensus 1021 TL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~ 1100 (1224)
||+++|+|+|+|++|+|+|||+|+++++++++|++|++|||||+||+|||||||++++ .++|+|+|+|++.+++++||.
T Consensus 1280 TLl~lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~ 1358 (1622)
T PLN03130 1280 SMLNALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIR 1358 (1622)
T ss_pred HHHHHHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999986 579999999999999999999
Q ss_pred hcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh
Q 047171 1101 STEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK 1180 (1224)
Q Consensus 1101 ~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~ 1180 (1224)
++|+||||+|||+|.+|||||||||||||||+|+|+|||||||||+||.+||+.|+++|++.+++||+|+||||++|+++
T Consensus 1359 ~lp~GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~ 1438 (1622)
T PLN03130 1359 RNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIID 1438 (1622)
T ss_pred hCccccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHHhhc
Q 047171 1181 ADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKMQAS 1219 (1224)
Q Consensus 1181 aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~ 1219 (1224)
||||+||++|+|+|+|+|+||+++ ++|.|++|++.+..
T Consensus 1439 ~DrIlVLd~G~IvE~Gt~~eLl~~-~~g~f~~L~~~~~~ 1476 (1622)
T PLN03130 1439 CDRILVLDAGRVVEFDTPENLLSN-EGSAFSKMVQSTGA 1476 (1622)
T ss_pred CCEEEEEECCEEEEeCCHHHHHhC-CCCHHHHHHHHcCh
Confidence 999999999999999999999986 47999999987643
No 5
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=3.9e-154 Score=1543.67 Aligned_cols=1131 Identities=20% Similarity=0.253 Sum_probs=847.0
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChH--HHHHHHHHH-------HH-HHHH--HHHHHHHHHHHHHHHHHH
Q 047171 19 LLFGTVGSIGDGMMTPLTMYILSMVINELGTSDIS--ISIEAVDKV-------PE-KGMC--WTRTAERQASRIRMEYLK 86 (1224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--~~~~~~~~~-------~~-~~~~--~~~~~~~~~~~lR~~~~~ 86 (1224)
++++.++.++..++....|++++.++|.+...+.. .+...+..+ +. ..+. ..+.+.++...++..+|+
T Consensus 303 ~~~~~~~~i~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ir~~l~~~i~~ 382 (1495)
T PLN03232 303 FWLGGIFKIGHDLSQFVGPVILSHLLQSMQEGDPAWVGYVYAFLIFFGVTFGVLCESQYFQNVGRVGFRLRSTLVAAIFH 382 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455556666677777788999999987533211 111111100 11 1111 245666777777779999
Q ss_pred HHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH---HHHH
Q 047171 87 SVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALPFS---LLFI 163 (1224)
Q Consensus 87 ~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~---~~~~ 163 (1224)
|+++++..++++ . ++|++++++++|++.+++++ ..+..++..++.++++++++ .+.+++++++.+ .+++
T Consensus 383 k~l~l~~~~~~~---~-~~G~i~n~ls~Dv~~i~~~~-~~l~~l~~~p~~ii~~~~~l---~~~lg~~~l~~~~v~~l~~ 454 (1495)
T PLN03232 383 KSLRLTHEARKN---F-ASGKVTNMITTDANALQQIA-EQLHGLWSAPFRIIVSMVLL---YQQLGVASLFGSLILFLLI 454 (1495)
T ss_pred HHhcCChhhcCC---C-CHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH---HHHHhHHHHHHHHHHHHHH
Confidence 999999999998 4 99999999999999999986 44555555554444444332 233444333222 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 164 VPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSMGMTY 243 (1224)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (1224)
++..++.++.++..++.++..+++.+.+.|.++||++||+|++|+.+.+++++..+++.+...+.....++...+... .
T Consensus 455 pl~~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~gi~~IK~~~~e~~~~~~~~~~r~~e~~~~~~~~~~~~~~~~~~~~-~ 533 (1495)
T PLN03232 455 PLQTLIVRKMRKLTKEGLQWTDKRVGIINEILASMDTVKCYAWEKSFESRIQGIRNEELSWFRKAQLLSAFNSFILNS-I 533 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 456678899999999999999999999999999999999999999999999999988888777776665544332211 1
Q ss_pred HHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccc
Q 047171 244 GAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAY 323 (1224)
Q Consensus 244 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~ 323 (1224)
...+.++++|++++.+|.+|+|.+++++.+...+..|+..+...+..+.++.+|++||.++++.+++.+... .....
T Consensus 534 ~~~~~~~~fg~~~v~~~~lt~g~vf~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~L~~~~~~~~~~---~~~~~ 610 (1495)
T PLN03232 534 PVVVTLVSFGVFVLLGGDLTPARAFTSLSLFAVLRSPLNMLPNLLSQVVNANVSLQRIEELLLSEERILAQN---PPLQP 610 (1495)
T ss_pred HHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccc---CCcCC
Confidence 123335678999999999999999999999999999999888889999999999999999998665422111 11111
Q ss_pred ccccEEEEeEEEECCCC-------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHh
Q 047171 324 LRGEIEFKDVDFSYPTR-------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLR 390 (1224)
Q Consensus 324 ~~~~i~~~~v~f~y~~~-------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 390 (1224)
..+.|+++||+|+|++. ++|++++||||||||||||+++|+|+|+|++|.+. ++|
T Consensus 611 ~~~~I~~~~vsF~y~~~~~~~vL~~inl~i~~Ge~vaIvG~sGSGKSTLl~lLlG~~~~~~G~i~------------~~~ 678 (1495)
T PLN03232 611 GAPAISIKNGYFSWDSKTSKPTLSDINLEIPVGSLVAIVGGTGEGKTSLISAMLGELSHAETSSV------------VIR 678 (1495)
T ss_pred CCCcEEEEeeEEEcCCCCCCceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCcccCCCEE------------Eec
Confidence 23469999999999742 25669999999999999999999999999998763 356
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
++|+||+|+||||++||+|||+||+| .++++++++++.|+++++++.||+|++|.+||+|.+||||||||||||||+++
T Consensus 679 ~~Iayv~Q~p~Lf~gTIreNI~fg~~-~~~e~~~~vl~~~~L~~di~~Lp~Gd~T~IGe~G~~LSGGQkQRIaLARAly~ 757 (1495)
T PLN03232 679 GSVAYVPQVSWIFNATVRENILFGSD-FESERYWRAIDVTALQHDLDLLPGRDLTEIGERGVNISGGQKQRVSMARAVYS 757 (1495)
T ss_pred CcEEEEcCccccccccHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhCCCCCCceecCCCcccCHHHHHHHHHHHHHhc
Confidence 78999999999999999999999986 68899999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHH-HHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchH
Q 047171 471 DPKILLLDEATSALDAESERIVQ-EALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAY 549 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~-~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y 549 (1224)
+|+||||||||||||+++++.+. +++....+++|+|+||||++.++.||+|++|++|+|+++|+|+||++. ++.|
T Consensus 758 ~~~IlLLDEptSaLD~~t~~~I~~~~l~~~l~~kT~IlvTH~~~~l~~aD~Ii~L~~G~i~~~Gt~~eL~~~----~~~~ 833 (1495)
T PLN03232 758 NSDIYIFDDPLSALDAHVAHQVFDSCMKDELKGKTRVLVTNQLHFLPLMDRIILVSEGMIKEEGTFAELSKS----GSLF 833 (1495)
T ss_pred CCCEEEEcCCccccCHHHHHHHHHHHhhhhhcCCEEEEEECChhhHHhCCEEEEEeCCEEEEecCHHHHHhc----chhH
Confidence 99999999999999999988774 556667789999999999999999999999999999999999999987 7889
Q ss_pred HHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccC
Q 047171 550 SKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNF 629 (1224)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (1224)
.++++.+....+.... ..+. +.... ..... ... ... .. ........... ....+.+
T Consensus 834 ~~l~~~~~~~~~~~~~--~~~~--~~~~~-~~~~~----~~~-~~~-~~------~~~~~~~~~~~-----~~~~~~e-- 889 (1495)
T PLN03232 834 KKLMENAGKMDATQEV--NTND--ENILK-LGPTV----TID-VSE-RN------LGSTKQGKRGR-----SVLVKQE-- 889 (1495)
T ss_pred HHHHHhcccccccccc--cccc--ccccc-ccccc----ccc-ccc-cc------cccccccccch-----hhhhhHH--
Confidence 8887654321110000 0000 00000 00000 000 000 00 00000000000 0000000
Q ss_pred CCCCCCchHHHHHHHHhhHHH--HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHH
Q 047171 630 HDNSHSPSSLLRLLRMSAIEW--KRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLT 707 (1224)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 707 (1224)
+...+...+..+.+|.+..+ +...+.+++.++..++.....+|++.|.+. ..........|+.+|++++++.
T Consensus 890 -~~~~g~v~~~vy~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~w~~~-----~~~~~~~~~~~l~~y~~l~~~~ 963 (1495)
T PLN03232 890 -ERETGIISWNVLMRYNKAVGGLWVVMILLVCYLTTEVLRVSSSTWLSIWTDQ-----STPKSYSPGFYIVVYALLGFGQ 963 (1495)
T ss_pred -HHhcCcccHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-----cCCCCCCcchHHHHHHHHHHHH
Confidence 01122233444444444322 222222222222222222333444433321 1000112356888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 708 LIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLA 787 (1224)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~ 787 (1224)
.++.+++.+++...+.++..++|++++++++++|++||+ .+++|+++||+++|++.++..++..+..++..++.++++
T Consensus 964 ~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~--~~~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~ 1041 (1495)
T PLN03232 964 VAVTFTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFH--TNPTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLST 1041 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeC--cCCchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 788999999999999999999999998888888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHH
Q 047171 788 YTLSLLVTWRVAIVMIAVQPLNIGCFYSR---SVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRET 864 (1224)
Q Consensus 788 ~~~~~~~~~~l~lv~l~~~pl~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~ 864 (1224)
+++++..++...+ +++|+.+.+.... .+..+...+......++..+++.|++.|++|||+|+.++++.+++.+.
T Consensus 1042 ~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~ 1118 (1495)
T PLN03232 1042 FALIGTVSTISLW---AIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKS 1118 (1495)
T ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHH
Confidence 7777666653322 2233333322222 222233444445566778899999999999999999999998888888
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCcC-----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 865 MKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMN-QGLVS-----PKQLFQAFFLLMSTGKNIADAGSMTSD 938 (1224)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~t-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1224)
.+...+..+.......+.......+ +.+++++.+...+. .+.+. .+.+..++.+......++..+...+.+
T Consensus 1119 ~~~~~~~~~~~~~~~~wl~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~ 1195 (1495)
T PLN03232 1119 MDNNIRFTLANTSSNRWLTIRLETL---GGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASK 1195 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7777665544333322222222221 12222222333333 23221 122223444455556677888889999
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCC
Q 047171 939 IAKGSSAIRTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSG 1018 (1224)
Q Consensus 939 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsG 1018 (1224)
++.++.+++|+.++++.++|.+........+..||..|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||
T Consensus 1196 ~~~~~~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~-~~~vL~~isl~I~~GekvaIVG~SGSG 1274 (1495)
T PLN03232 1196 AENSLNSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPG-LPPVLHGLSFFVSPSEKVGVVGRTGAG 1274 (1495)
T ss_pred HHHHHHHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCC-CCcccccceEEEcCCCEEEEECCCCCC
Confidence 9999999999999998776543211111111234667899999999999633 357999999999999999999999999
Q ss_pred hHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHH
Q 047171 1019 KSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEF 1098 (1224)
Q Consensus 1019 KSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~ 1098 (1224)
||||+++|+|+|+|++|+|.|||+|++++++++||++|++|||||+||+|||||||++++ .++|+|+++|++.++++++
T Consensus 1275 KSTL~~lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~ 1353 (1495)
T PLN03232 1275 KSSMLNALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDV 1353 (1495)
T ss_pred HHHHHHHHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHH
Confidence 999999999999999999999999999999999999999999999999999999999985 6899999999999999999
Q ss_pred HHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh
Q 047171 1099 ISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTI 1178 (1224)
Q Consensus 1099 I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti 1178 (1224)
|.++|+||||.+||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++.+++||+|+||||++++
T Consensus 1354 I~~lp~GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti 1433 (1495)
T PLN03232 1354 IDRNPFGLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTI 1433 (1495)
T ss_pred HHhCcCCCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHHhhc
Q 047171 1179 QKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKMQAS 1219 (1224)
Q Consensus 1179 ~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~ 1219 (1224)
++||+|+||++|+|+|+|||+||+++ ++|.|++|++.+..
T Consensus 1434 ~~~DrIlVL~~G~ivE~Gt~~eLl~~-~~~~f~~l~~~~~~ 1473 (1495)
T PLN03232 1434 IDCDKILVLSSGQVLEYDSPQELLSR-DTSAFFRMVHSTGP 1473 (1495)
T ss_pred HhCCEEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHhCh
Confidence 99999999999999999999999986 35799999987654
No 6
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=5e-149 Score=1496.33 Aligned_cols=1160 Identities=20% Similarity=0.221 Sum_probs=870.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCC-hH--HHHHHHH---HH-----HHH--HHHHHHHHHHHHHHHHHHHHH
Q 047171 20 LFGTVGSIGDGMMTPLTMYILSMVINELGTSD-IS--ISIEAVD---KV-----PEK--GMCWTRTAERQASRIRMEYLK 86 (1224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~--~~~~~~~---~~-----~~~--~~~~~~~~~~~~~~lR~~~~~ 86 (1224)
+.++++.++..++....|++++.++|.+...+ .. .+..... .. ... .+...+.+.++...++..+|+
T Consensus 320 l~~~~~~l~~~~~~~~~P~ll~~li~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ir~~L~~~iy~ 399 (1522)
T TIGR00957 320 LMSFCFKAIHDLMMFIGPQILSLLIRFVNDPMAPDWQGYFYTGLLFVCACLQTLILHQYFHICFVSGMRIKTAVMGAVYR 399 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555566666667789999999764321 11 1111000 00 111 122345677888888899999
Q ss_pred HHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 047171 87 SVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALPFSLLFIVPG 166 (1224)
Q Consensus 87 ~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~ 166 (1224)
|+++++..++++ . ++|++++++++|++.+.++. ..+..++..++.+++++++++..-...+++.++++++++++.
T Consensus 400 K~L~l~~~~~~~---~-~~G~i~nl~s~D~~~i~~~~-~~~~~~~~~~~~i~~~~~ll~~~~g~~~l~~l~~~~~~~~~~ 474 (1522)
T TIGR00957 400 KALVITNSARKS---S-TVGEIVNLMSVDAQRFMDLA-TYINMIWSAPLQVILALYFLWLNLGPSVLAGVAVMVLMVPLN 474 (1522)
T ss_pred HHHhCChhhcCC---C-CHHHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 999999999998 4 99999999999999999865 344555555555555444433322224455666667777788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 167 IVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSMGMTYGAW 246 (1224)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (1224)
.++.+++++..++.++..+++.+.+.|.++||++||+|+||+.+.+++++.++++.+...+......+........ ...
T Consensus 475 ~~~~~~~~~~~~~~~~~~d~r~~~~~E~l~~ik~IK~~~~e~~~~~~i~~~r~~e~~~~~~~~~~~~~~~~~~~~~-~~~ 553 (1522)
T TIGR00957 475 AVMAMKTKTYQVAHMKSKDNRIKLMNEILNGIKVLKLYAWELAFLDKVEGIRQEELKVLKKSAYLHAVGTFTWVCT-PFL 553 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
Confidence 8889999999999999999999999999999999999999999999999999888777666555544432221111 112
Q ss_pred HHHHHHHHHHHHh--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccccccccc
Q 047171 247 AFQSWVGSVLVTE--RGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAYL 324 (1224)
Q Consensus 247 ~~~~~~g~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~ 324 (1224)
+.++.++.+.+.. +.++++.+++++.++..+..|+..+...+..+.++.+|.+||.++++.++..+.........+..
T Consensus 554 ~~~~~f~~~~~~~~~~~l~~~~~f~~l~l~~~l~~pl~~l~~~~~~~~~a~~s~~Ri~~~l~~~~~~~~~~~~~~~~~~~ 633 (1522)
T TIGR00957 554 VALITFAVYVTVDENNILDAEKAFVSLALFNILRFPLNILPMVISSIVQASVSLKRLRIFLSHEELEPDSIERRTIKPGE 633 (1522)
T ss_pred HHHHHHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccccccccccccCCCC
Confidence 2223345566653 56889999988887778888999999999999999999999999998654321110000000111
Q ss_pred cccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcc
Q 047171 325 RGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQ 392 (1224)
Q Consensus 325 ~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 392 (1224)
.+.|+++|++|+|++. ++|+.++|+||||||||||+++|+|+++|++|+|.++| +
T Consensus 634 ~~~i~~~~~~~~~~~~~~~~l~~isl~i~~G~~v~IvG~~GsGKSTLl~~l~g~~~~~~G~i~~~g-------------~ 700 (1522)
T TIGR00957 634 GNSITVHNATFTWARDLPPTLNGITFSIPEGALVAVVGQVGCGKSSLLSALLAEMDKVEGHVHMKG-------------S 700 (1522)
T ss_pred CCcEEEEEeEEEcCCCCCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCccCCcEEEECC-------------E
Confidence 2369999999999742 25679999999999999999999999999999999997 5
Q ss_pred cEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 047171 393 MGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDP 472 (1224)
Q Consensus 393 i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~ 472 (1224)
|+||+|+||+|++||+|||.||.+ .++++..++++.|++.+++..+|+|++|.+|++|.+|||||||||+||||++++|
T Consensus 701 i~yv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~l~~~l~~~~~g~~t~ig~~g~~LSGGQkqRiaLARAl~~~~ 779 (1522)
T TIGR00957 701 VAYVPQQAWIQNDSLRENILFGKA-LNEKYYQQVLEACALLPDLEILPSGDRTEIGEKGVNLSGGQKQRVSLARAVYSNA 779 (1522)
T ss_pred EEEEcCCccccCCcHHHHhhcCCc-cCHHHHHHHHHHhCCHHHHHhcCCCCCceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999976 4567788888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHH---HcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchH
Q 047171 473 KILLLDEATSALDAESERIVQEALDQ---ASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAY 549 (1224)
Q Consensus 473 ~ililDE~ts~lD~~~~~~i~~~l~~---~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y 549 (1224)
+|+|||||||+||+++++.+.+.+.+ ..+++|+|+|||+++.++.||+|++|++|+|+++|+|+|+.+. ++.|
T Consensus 780 ~illLDEp~saLD~~~~~~i~~~l~~~~~~~~~~tvIlvTH~~~~l~~~D~ii~l~~G~i~~~g~~~~l~~~----~~~~ 855 (1522)
T TIGR00957 780 DIYLFDDPLSAVDAHVGKHIFEHVIGPEGVLKNKTRILVTHGISYLPQVDVIIVMSGGKISEMGSYQELLQR----DGAF 855 (1522)
T ss_pred CEEEEcCCccccCHHHHHHHHHHHhhhhhhhcCCEEEEEeCChhhhhhCCEEEEecCCeEEeeCCHHHHHhc----chhH
Confidence 99999999999999999999988853 4578999999999999999999999999999999999999986 6788
Q ss_pred HHHHHHHHHhhhhhcccCCCCC--CCCcccccccCCCCC-----CCCCCCCCCCCCCCCCCCCCCc-cc-cccCcccccc
Q 047171 550 SKMVQLQQSAMRNEVASGSYNP--TKSKSHHSLMSAQTP-----HTPINEGSSYQNSPIYPLSPTF-SI-SMTGSFQMHS 620 (1224)
Q Consensus 550 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~ 620 (1224)
.++...+......+........ ..+.......+.... ...................... .. ..........
T Consensus 856 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1522)
T TIGR00957 856 AEFLRTYAPDEQQGHLEDSWTALVSGEGKEAKLIENGMLVTDVVGKQLQRQLSASSSDSGDQSRHHGSSAELQKAEAKEE 935 (1522)
T ss_pred HHHHHhhccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccccccccccccccccc
Confidence 8877644321110000000000 000000000000000 0000000000000000000000 00 0000000000
Q ss_pred -cccccCccCCCCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHH
Q 047171 621 -VENQNDKNFHDNSHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLI 699 (1224)
Q Consensus 621 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 699 (1224)
.....++...........++.|++... +...++.+++..+..++....+++++.|.+..... ........|..+
T Consensus 936 ~~~~~~~e~~~~g~v~~~~y~~Y~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~l~~w~~~~~~~---~~~~~~~~~~~i 1010 (1522)
T TIGR00957 936 TWKLMEADKAQTGQVELSVYWDYMKAIG--LFITFLSIFLFVCNHVSALASNYWLSLWTDDPMVN---GTQNNTSLRLSV 1010 (1522)
T ss_pred hhhhHHHHHHhcCcccHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc---CCCCCcchHHHH
Confidence 000000000001112233334443322 22222222223333334444556666555421100 001122346668
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Q 047171 700 FLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQ 779 (1224)
Q Consensus 700 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~ 779 (1224)
|++++++..++.++..+++.+.+.++..++|++++++++++|++||| .+++|+++||+++|++.++..++..+..++.
T Consensus 1011 y~~l~i~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnR~s~Di~~id~~l~~~~~~~~~ 1088 (1522)
T TIGR00957 1011 YGALGILQGFAVFGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFE--RTPSGNLVNRFSKELDTVDSMIPPVIKMFMG 1088 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhc--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888889899999999999999999999999999999999999999 7889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHH
Q 047171 780 VFFSASLAYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILD 859 (1224)
Q Consensus 780 ~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 859 (1224)
.++.+++.++++++.+|.+++++++++++.+.+...+.+..+...+......++..+++.|++.|+++||+|++++++.+
T Consensus 1089 ~~~~~i~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~ 1168 (1522)
T TIGR00957 1089 SLFNVIGALIVILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIH 1168 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHH
Confidence 99999998888888888766655555444444333333444444455556677889999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 860 LFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIM-NQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSD 938 (1224)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 938 (1224)
++.+..+...+..+.......+.....+++..+ ++++.+...+ ..+.+++|.+.+++.+......++..+...+.+
T Consensus 1169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~ 1245 (1522)
T TIGR00957 1169 QSDLKVDENQKAYYPSIVANRWLAVRLECVGNC---IVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSE 1245 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988887766555555544444444332 2233333333 357899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCC
Q 047171 939 IAKGSSAIRTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSG 1018 (1224)
Q Consensus 939 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsG 1018 (1224)
++.++.+++|+.++++.++|.+........+..||..|.|+|+||+|+|+++ .++||+|+||+|+|||+||||||||||
T Consensus 1246 ~e~~~~s~eRi~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~-~~~vL~~is~~I~~GekiaIVGrTGsG 1324 (1522)
T TIGR00957 1246 METNIVAVERLKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYRED-LDLVLRHINVTIHGGEKVGIVGRTGAG 1324 (1522)
T ss_pred HHHHHHHHHHHHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCC-CcccccceeEEEcCCCEEEEECCCCCC
Confidence 9999999999999998766532111111111235667899999999999754 347999999999999999999999999
Q ss_pred hHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHH
Q 047171 1019 KSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEF 1098 (1224)
Q Consensus 1019 KSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~ 1098 (1224)
||||+++|+|+|+|++|+|+|||+|+++++++++|++|++|||||+||+|||||||+++. .++|+|+|+|++.++++++
T Consensus 1325 KSTL~~lL~rl~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~ 1403 (1522)
T TIGR00957 1325 KSSLTLGLFRINESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTF 1403 (1522)
T ss_pred HHHHHHHHhcCccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHH
Confidence 999999999999999999999999999999999999999999999999999999999763 6899999999999999999
Q ss_pred HHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh
Q 047171 1099 ISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTI 1178 (1224)
Q Consensus 1099 I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti 1178 (1224)
|.++|+||||.|||+|.+|||||||||||||||+|+|+|||||||||+||++||+.|+++|++.+++||+|+||||++++
T Consensus 1404 I~~lp~GLdt~v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti 1483 (1522)
T TIGR00957 1404 VSALPDKLDHECAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTI 1483 (1522)
T ss_pred HhhCccCCCceecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHHh
Q 047171 1179 QKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKMQ 1217 (1224)
Q Consensus 1179 ~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q 1217 (1224)
.+||||+||++|+|+|+|+|+||+++ +|.|++|+++.
T Consensus 1484 ~~~DrIlVld~G~IvE~G~~~eLl~~--~~~f~~l~~~~ 1520 (1522)
T TIGR00957 1484 MDYTRVIVLDKGEVAEFGAPSNLLQQ--RGIFYSMAKDA 1520 (1522)
T ss_pred HhCCEEEEEECCEEEEECCHHHHHhC--CCHHHHHHHHc
Confidence 99999999999999999999999987 79999999864
No 7
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=3.4e-142 Score=1424.57 Aligned_cols=1146 Identities=18% Similarity=0.196 Sum_probs=855.5
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChH---HHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHH
Q 047171 19 LLFGTVGSIGDGMMTPLTMYILSMVINELGTSDIS---ISIEAVDKV----------PEKGMCWTRTAERQASRIRMEYL 85 (1224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~---~~~~~~~~~----------~~~~~~~~~~~~~~~~~lR~~~~ 85 (1224)
+++.+++.++..++....|++++.+++.+...+.. .+...+..+ ....+...+.+.++-..++..+|
T Consensus 246 ~~~~~~~~l~~~~~~l~~P~ll~~~v~~l~~~~~~~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~r~~~~~r~~L~~~if 325 (1560)
T PTZ00243 246 VWWQIPFKLLSDVCTLTLPVLLKYFVKFLDADNATWGRGLGLVLTLFLTQLIQSVCLHRFYYISIRCGLQYRSALNALIF 325 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666677777777788999999876432211 111110000 11123344556666667777899
Q ss_pred HHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 047171 86 KSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALPFSLLFIVP 165 (1224)
Q Consensus 86 ~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~ 165 (1224)
+|+++++...+.+ +.. .+|+++|.+++|++.+.+++.. +..++...+.++++++++..+..+.+++.++++++++++
T Consensus 326 ~K~l~ls~~~~~~-~~~-~~G~i~nl~s~Dv~~i~~~~~~-~~~l~~~Pl~li~~~~lL~~~lG~~al~gv~vl~v~~pl 402 (1560)
T PTZ00243 326 EKCFTISSKSLAQ-PDM-NTGRIINMMSTDVERINSFMQY-CMYLWSSPMVLLLSILLLSRLVGWCALMAVAVLLVTLPL 402 (1560)
T ss_pred HHHHhCChhhhCC-CCC-CHHHHHHHHHHhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 9999999887752 013 8999999999999999999844 456667777777777777776666888888888888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 166 GIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSMGMTYGA 245 (1224)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (1224)
..++.++..+..++.++..+++.+.+.|.++|||+||.|+||+.+.+++.+.++++.+...+......+...+..... .
T Consensus 403 ~~~~~k~~~~~~~~~~~~~D~Ri~~~~E~l~gIr~IK~~~wE~~f~~ri~~~R~~El~~l~~~~~~~~~~~~~~~~~p-~ 481 (1560)
T PTZ00243 403 NGAIMKHQMAARRKIAKAADARVKATNEFFSGIRIAKFMAWEPCFVANIEDKRARELRYLRDVQLARVATSFVNNATP-T 481 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-H
Confidence 999999999999999999999999999999999999999999999999999999888887776666655443331111 1
Q ss_pred HHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCC----CC-c-----
Q 047171 246 WAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVIN----SE-D----- 315 (1224)
Q Consensus 246 ~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~----~~-~----- 315 (1224)
.+.++.++++.+.++.+|++.+|+++.++..+..|+..+...+..+.++.+|++||.++|+.++... +. +
T Consensus 482 l~~~~~f~~y~~~g~~Lt~~~vft~laL~~~L~~Pl~~lp~~~~~~~~a~vS~~RI~~fL~~~e~~~~~~~~~~~~~~~~ 561 (1560)
T PTZ00243 482 LMIAVVFTVYYLLGHELTPEVVFPTIALLGVLRMPFFMIPWVFTTVLQFLVSIKRISTFLECDNATCSTVQDMEEYWREQ 561 (1560)
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccccccccccchhhcccc
Confidence 1222345677888899999999999999999999999999999999999999999999997543100 00 0
Q ss_pred -------c------cc-------cc---------------------------cccccccEE-------------------
Q 047171 316 -------E------IG-------KT---------------------------LAYLRGEIE------------------- 329 (1224)
Q Consensus 316 -------~------~~-------~~---------------------------~~~~~~~i~------------------- 329 (1224)
. +. .. .....+.+.
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 641 (1560)
T PTZ00243 562 REHSTACQLAAVLENVDVTAFVPVKLPRAPKVKTSLLSRALRMLCCEQCRPTKRHPSPSVVVEDTDYGSPSSASRHIVEG 641 (1560)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhccccccccccccccccccccccccccccccccccccc
Confidence 0 00 00 000001233
Q ss_pred ----------------------------------EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 047171 330 ----------------------------------FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNIL 375 (1224)
Q Consensus 330 ----------------------------------~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 375 (1224)
++|++|.. ++|+.++|+||||||||||+++|+|+++|++|+|.
T Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~isl~i---~~G~~~~IiG~nGsGKSTLL~~i~G~~~~~~G~i~ 718 (1560)
T PTZ00243 642 GTGGGHEATPTSERSAKTPKMKTDDFFELEPKVLLRDVSVSV---PRGKLTVVLGATGSGKSTLLQSLLSQFEISEGRVW 718 (1560)
T ss_pred cccccccccccccccccccccccccccccCCceeEeeeEEEE---CCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEE
Confidence 44444443 24669999999999999999999999999999998
Q ss_pred ECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCC
Q 047171 376 LDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLS 455 (1224)
Q Consensus 376 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 455 (1224)
++ ++||||+|+|++|++||+|||.++.+ .+.+++.++.+.++++++++.+|+|++|.+|++|.+||
T Consensus 719 ~~-------------~~i~yv~Q~~~l~~~Tv~enI~~~~~-~~~~~~~~~~~~~~l~~~l~~l~~g~~t~i~~~g~~LS 784 (1560)
T PTZ00243 719 AE-------------RSIAYVPQQAWIMNATVRGNILFFDE-EDAARLADAVRVSQLEADLAQLGGGLETEIGEKGVNLS 784 (1560)
T ss_pred EC-------------CeEEEEeCCCccCCCcHHHHHHcCCh-hhHHHHHHHHHHhhhHHHHHHhhccchHHhcCCCCCCC
Confidence 74 36999999999999999999999875 34567778888889999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecC
Q 047171 456 GGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQE-ALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGS 534 (1224)
Q Consensus 456 gGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~ 534 (1224)
|||||||+||||++.+|+|||||||||+||+++++.+.+ ++....+|+|+|+|||+++.+..||+|++|++|+++++|+
T Consensus 785 GGQkqRvaLARAl~~~p~illLDEP~saLD~~~~~~i~~~~~~~~~~~~TvIlvTH~~~~~~~ad~ii~l~~G~i~~~G~ 864 (1560)
T PTZ00243 785 GGQKARVSLARAVYANRDVYLLDDPLSALDAHVGERVVEECFLGALAGKTRVLATHQVHVVPRADYVVALGDGRVEFSGS 864 (1560)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEecC
Confidence 999999999999999999999999999999998776654 4555557899999999999999999999999999999999
Q ss_pred hHHHHhhccCCCchHHHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccC
Q 047171 535 HDVLMQMNNGEGGAYSKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTG 614 (1224)
Q Consensus 535 ~~~l~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (1224)
++|+++. +.|.++........+... ............ ........ ........ ..........
T Consensus 865 ~~~l~~~-----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~------~~~~~~~~~~ 927 (1560)
T PTZ00243 865 SADFMRT-----SLYATLAAELKENKDSKE--GDADAEVAEVDA---APGGAVDH-EPPVAKQE------GNAEGGDGAA 927 (1560)
T ss_pred HHHHHhC-----hHHHHHHHhhcccccccc--cccccccccccc---cccccccc-cccccccc------cccccccccc
Confidence 9999863 457666543221110000 000000000000 00000000 00000000 0000000000
Q ss_pred cccccccccccCccCCCCCCCchHHHHHHHHhhHHH--HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhh
Q 047171 615 SFQMHSVENQNDKNFHDNSHSPSSLLRLLRMSAIEW--KRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSE 692 (1224)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1224)
. ..........++ ...+...++.+.+|.+... ...+..++..++..++.....++++.|.... ....
T Consensus 928 ~-~~~~~~l~~~e~---~~~g~v~~~~y~~Y~~~~g~~~~~~~~l~~~~~~~~~~~~~~~wl~~w~~~~-------~~~~ 996 (1560)
T PTZ00243 928 L-DAAAGRLMTREE---KASGSVPWSTYVAYLRFCGGLHAAGFVLATFAVTELVTVSSGVWLSMWSTRS-------FKLS 996 (1560)
T ss_pred c-ccccchhhhHHH---HhcCcccHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-------cCCC
Confidence 0 000000000000 0112223333433333211 1111111112222233333344444443211 1112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHH
Q 047171 693 TRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIAD 772 (1224)
Q Consensus 693 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~ 772 (1224)
...|+.+|+++.++..++.++..+.....+.+...++|++++++++++|+.||| .+++|+++||+++|++.++..+..
T Consensus 997 ~~~~l~~y~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd--~~~~G~ilnR~s~Di~~id~~l~~ 1074 (1560)
T PTZ00243 997 AATYLYVYLGIVLLGTFSVPLRFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFD--TTPLGRILNRFSRDIDILDNTLPM 1074 (1560)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhcc--CCCccHHHHHHHhhHHHHHHHHHH
Confidence 234667777777777777777777777888888999999999999999999999 788999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhc
Q 047171 773 RMSLLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFS 852 (1224)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~ 852 (1224)
.+..++..++.+++.++++++.+|.+.+++++++.+...+...+.+..+...+......++..+++.|++.|+++||+|+
T Consensus 1075 ~l~~~~~~~~~~i~~li~~~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~ 1154 (1560)
T PTZ00243 1075 SYLYLLQCLFSICSSILVTSASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYG 1154 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCc
Confidence 99999999999988888888888744333322222222222223333344444455566778999999999999999999
Q ss_pred cHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHhcCCcCHHHHHHHHHHHHHHHHHHH
Q 047171 853 SQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGR--IMNQGLVSPKQLFQAFFLLMSTGKNIA 930 (1224)
Q Consensus 853 ~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~g~~t~~~~~~~~~~~~~~~~~~~ 930 (1224)
.++.+.+++.+..+...+..+.......+......++..+..+++.+++.. +...+.++++.+..++.+......++.
T Consensus 1155 ~e~~~~~~~~~~~d~~~~~~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~ 1234 (1560)
T PTZ00243 1155 KAHLVMQEALRRLDVVYSCSYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLN 1234 (1560)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988877766666665555565555544444444433 233455788888777777788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCCC-CC-C-----------------------CCCCC--CCCCCCcccEEEEEE
Q 047171 931 DAGSMTSDIAKGSSAIRTIFTILDRKSEID-PE-D-----------------------PKASE--DIEEPTKGFIELKNV 983 (1224)
Q Consensus 931 ~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~-~~-~-----------------------~~~~~--~~~~~~~g~I~~~~v 983 (1224)
.+...+.+++.++.+++|+.++++..++.+ +. + +.... .+.++..|.|+|+||
T Consensus 1235 ~l~~~~~~le~~~~s~eRi~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nV 1314 (1560)
T PTZ00243 1235 WLVRQVATVEADMNSVERLLYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGV 1314 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEE
Confidence 999999999999999999999996433211 00 0 00000 011234578999999
Q ss_pred EEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCC
Q 047171 984 FFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEP 1063 (1224)
Q Consensus 984 sf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp 1063 (1224)
+|+|+++ .++||+||||+|+|||+||||||||||||||+++|+|+|+|++|+|+|||+|++++++++||++|++|||||
T Consensus 1315 sf~Y~~~-~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp 1393 (1560)
T PTZ00243 1315 QMRYREG-LPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDP 1393 (1560)
T ss_pred EEEeCCC-CCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCC
Confidence 9999753 356999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC-CCEEEEec
Q 047171 1064 TLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN-PMILLLDE 1142 (1224)
Q Consensus 1064 ~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~-p~ILlLDE 1142 (1224)
+||+|||||||+++ +.++|+|+|+|++.++++++|.++|+||||.|||+|.+|||||||||||||||+++ |+||||||
T Consensus 1394 ~LF~gTIreNIdp~-~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDE 1472 (1560)
T PTZ00243 1394 VLFDGTVRQNVDPF-LEASSAEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDE 1472 (1560)
T ss_pred ccccccHHHHhCcc-cCCCHHHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeC
Confidence 99999999999987 46899999999999999999999999999999999999999999999999999995 89999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHHhh
Q 047171 1143 ATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKMQA 1218 (1224)
Q Consensus 1143 aTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~ 1218 (1224)
|||+||++||+.|+++|++.++++|+|+||||++++++||+|+||++|+|+|+|+|+||+++ ++|.|++|++.+.
T Consensus 1473 ATSaLD~~te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~-~~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1473 ATANIDPALDRQIQATVMSAFSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMN-RQSIFHSMVEALG 1547 (1560)
T ss_pred CCccCCHHHHHHHHHHHHHHCCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhC-CCCHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999999985 4899999998764
No 8
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=3.9e-140 Score=1405.57 Aligned_cols=1153 Identities=18% Similarity=0.194 Sum_probs=834.1
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhhcCCCh----HHHHHHHH---HHH---H----HHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 24 VGSIGDGMMTPLTMYILSMVINELGTSDI----SISIEAVD---KVP---E----KGMCWTRTAERQASRIRMEYLKSVL 89 (1224)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~id~~~~~~~----~~~~~~~~---~~~---~----~~~~~~~~~~~~~~~lR~~~~~~l~ 89 (1224)
+..++..++....|++++++++.+...+. ..+...+. ..+ + ..+.....+.++-..+...+|+|++
T Consensus 87 ~~~~~~~~~~~~~P~ll~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~r~~L~~~iy~K~L 166 (1490)
T TIGR01271 87 ILLYFGEATKAVQPLLLGRIIASYDPFNAPEREIAYYLALGLCLLFIVRTLLLHPAIFGLHHLGMQMRIALFSLIYKKTL 166 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455556667889999998742211 11111110 001 1 1222333444455555555699999
Q ss_pred cCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 047171 90 RQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALPFSLLFIVPGIVF 169 (1224)
Q Consensus 90 ~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~ 169 (1224)
+++...+++ . ++|++++++++|++.+.+++... ..++...+.+++++++++....+.+++.++++++++++..++
T Consensus 167 ~l~~~~~~~---~-~~g~i~nl~s~Dv~~i~~~~~~~-~~~~~~pi~i~~~~~lL~~~~G~~~l~~l~v~~~~~~~~~~~ 241 (1490)
T TIGR01271 167 KLSSRVLDK---I-STGQLVSLLSNNLNKFDEGLALA-HFVWIAPLQVILLMGLIWELLEVNGFCGLGFLILLALFQACL 241 (1490)
T ss_pred hCCHHHhcC---C-CHHHHHHHHHHhHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 4 99999999999999999987654 344455565666666666666667888888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 170 GKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSMGMTYGAWAFQ 249 (1224)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (1224)
++++.+..++.++..+++.+.+.|.++|||+||+|+||+.+.+++.+.++++.+...+......+...+... ....+.+
T Consensus 242 ~~~~~~~~~~~~~~~d~R~~~~~E~l~~ik~IK~~~~E~~~~~~i~~~R~~El~~~~~~~~~~~~~~~~~~~-~~~~~~~ 320 (1490)
T TIGR01271 242 GQKMMPYRDKRAGKISERLAITSEIIENIQSVKAYCWEEAMEKIIKNIRQDELKLTRKIAYLRYFYSSAFFF-SGFFVVF 320 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHH
Confidence 999999999999999999999999999999999999999999999999998888877766655443332211 2223344
Q ss_pred HHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccccccccccccE
Q 047171 250 SWVGSVLVTERGEKGGLVFVAGICTILGGVGIM-SALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAYLRGEI 328 (1224)
Q Consensus 250 ~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i 328 (1224)
+.++++.+..+ ++++.+|+++.++..+..|+. .+...+..+.++.+|++||.++|+.++..... .. .....|
T Consensus 321 ~~f~~y~~~~~-~~~~~~ft~lal~~lL~~~l~~~lp~~~~~~~~a~~s~~RI~~fL~~~e~~~~~----~~--~~~~~i 393 (1490)
T TIGR01271 321 LSVVPYALIKG-IILRRIFTTISYCIVLRMTVTRQFPGAIQTWYDSLGAITKIQDFLCKEEYKTLE----YN--LTTTEV 393 (1490)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccc----cc--CCCCce
Confidence 55667766644 688999998888777777875 56777899999999999999999765431110 00 011246
Q ss_pred EEEeEEEECCCC--------------------------------------------CCCCEEEEEcCCCCcHHHHHHHHh
Q 047171 329 EFKDVDFSYPTR--------------------------------------------PDTPTIGLVGSSGSGKSTVISLLE 364 (1224)
Q Consensus 329 ~~~~v~f~y~~~--------------------------------------------~~~~~~~ivG~sGsGKSTl~~ll~ 364 (1224)
+++|++|+|+.. ++|+.++|+||||||||||+++|+
T Consensus 394 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~l~~i~l~i~~G~~~~I~G~~GsGKSTLl~~l~ 473 (1490)
T TIGR01271 394 EMVNVTASWDEGIGELFEKIKQNNKARKQPNGDDGLFFSNFSLYVTPVLKNISFKLEKGQLLAVAGSTGSGKSSLLMMIM 473 (1490)
T ss_pred EEecceEecCCccccccccccccccccccccccccccccccccccCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHh
Confidence 666666666310 245589999999999999999999
Q ss_pred cCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhcccccc
Q 047171 365 RFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYE 444 (1224)
Q Consensus 365 ~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~ 444 (1224)
|+++|++|+|.++| +|+||+|+||+|++||+|||.||.+ .+.++..++++.|++++++..+|+|++
T Consensus 474 G~~~~~~G~i~~~g-------------~iayv~Q~~~l~~~Ti~eNI~~g~~-~~~~~~~~~~~~~~L~~~l~~l~~g~~ 539 (1490)
T TIGR01271 474 GELEPSEGKIKHSG-------------RISFSPQTSWIMPGTIKDNIIFGLS-YDEYRYTSVIKACQLEEDIALFPEKDK 539 (1490)
T ss_pred CCCCCCCceEEECC-------------EEEEEeCCCccCCccHHHHHHhccc-cchHHHHHHHHHHhHHHHHHhcccccc
Confidence 99999999999998 4999999999999999999999975 445667777888889999999999999
Q ss_pred ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH-HHHHHcCCCeEEEEeCCcchhhccCEEEE
Q 047171 445 TKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQE-ALDQASQGRTMIIIAHRLSTIRKADLIGV 523 (1224)
Q Consensus 445 t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~-~l~~~~~~~t~i~i~H~l~~~~~ad~i~v 523 (1224)
|.+|++|.+|||||||||+||||++++|+|+|||||||+||+++++.+.+ ++....+++|+|+|||+++.+..||+|++
T Consensus 540 t~vg~~g~~LSgGqkqRi~lARAl~~~~~illLDep~saLD~~~~~~i~~~~l~~~~~~~tvilvtH~~~~~~~ad~ii~ 619 (1490)
T TIGR01271 540 TVLGEGGITLSGGQRARISLARAVYKDADLYLLDSPFTHLDVVTEKEIFESCLCKLMSNKTRILVTSKLEHLKKADKILL 619 (1490)
T ss_pred ccccCcCCCcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCChHHHHhCCEEEE
Confidence 99999999999999999999999999999999999999999999998886 56777789999999999999999999999
Q ss_pred EeCceEEeecChHHHHhhccCCCchHHHHHHHHHHhh----h------hhc------c--c-----C-C-----CCCCCC
Q 047171 524 LQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQSAM----R------NEV------A--S-----G-S-----YNPTKS 574 (1224)
Q Consensus 524 l~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~~~----~------~~~------~--~-----~-~-----~~~~~~ 574 (1224)
|++|+|++.|+++++.+. ++.|.+.+....... + .+. . . . . ..+...
T Consensus 620 l~~g~i~~~g~~~~l~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 695 (1490)
T TIGR01271 620 LHEGVCYFYGTFSELQAK----RPDFSSLLLGLEAFDNFSAERRNSILTETLRRVSIDGDSTVFSGPETIKQSFKQPPPE 695 (1490)
T ss_pred EECCEEEEEcCHHHHHhc----ChHHHHHHhccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 999999999999999875 556665553110000 0 000 0 0 0 0 000000
Q ss_pred c-ccc--c---cc---------------CC--CCCCCCCCCCC-------C----CC-CCCCCC----------CC----
Q 047171 575 K-SHH--S---LM---------------SA--QTPHTPINEGS-------S----YQ-NSPIYP----------LS---- 605 (1224)
Q Consensus 575 ~-~~~--~---~~---------------~~--~~~~~~~~~~~-------~----~~-~~~~~~----------~~---- 605 (1224)
. ... . .. .. ........... . .. ..+... ..
T Consensus 696 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 775 (1490)
T TIGR01271 696 FAEKRKQSIILNPIASARKFSFVQMGPQKAQATTIEDAVREPSERKFSLVPEDEQGEESLPRGNQYHHGLQHQAQRRQSV 775 (1490)
T ss_pred ccccccccccccccccccccccccccccccccccccchhcccccccccccccccccccccccccccccccccccccccch
Confidence 0 000 0 00 00 00000000000 0 00 000000 00
Q ss_pred -----CC--c---c-c---cc-------------cC-cc--ccccccc-----cc--Ccc-------CCCCCCCchHHHH
Q 047171 606 -----PT--F---S-I---SM-------------TG-SF--QMHSVEN-----QN--DKN-------FHDNSHSPSSLLR 641 (1224)
Q Consensus 606 -----~~--~---~-~---~~-------------~~-~~--~~~~~~~-----~~--~~~-------~~~~~~~~~~~~~ 641 (1224)
.. . . . .. .. .. .....+. .+ ++. .++...+...+..
T Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~g~v~~~v 855 (1490)
T TIGR01271 776 LQLMTHSNRGENRREQLQTSFRKKSSITQQNELASELDIYSRRLSKDSVYEISEEINEEDLKECFADERENVFETTTWNT 855 (1490)
T ss_pred hhcccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhhHHHHhhcCcccHHH
Confidence 00 0 0 0 00 00 00 0000000 00 000 0000111233344
Q ss_pred HHHHhhHH--HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH--hc-cC-chh-h---------hhhHHHH-HHHHHHHH
Q 047171 642 LLRMSAIE--WKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAY--FI-KD-DSK-L---------KSETRLY-CLIFLGLA 704 (1224)
Q Consensus 642 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~-~~~-~---------~~~~~~~-~~~~~~l~ 704 (1224)
|++|.+.. +..+++.+++.++..++.....+|+..+.... +. .. ... . .....+| ..+|++++
T Consensus 856 Y~~Y~~~~g~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 935 (1490)
T TIGR01271 856 YLRYITTNRNLVFVLIFCLVIFLAEVAASLLGLWLITDNPSAPNYVDQQHANASSPDVQKPVIITPTSAYYIFYIYVGTA 935 (1490)
T ss_pred HHHHHHhcCcHHHHHHHHHHHHHHHHHHHHhhHHHHhcccccccccccccccCCCccccccccccCcchhhHHHHHHHHH
Confidence 44443321 22222222323333344444445554432200 00 00 000 0 0011222 44556666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Q 047171 705 FLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSA 784 (1224)
Q Consensus 705 ~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~ 784 (1224)
++..++.+++.+++.+.+.++..++|.++++++++.|++||+ .+++|+++||+++|++.++..++..+..++..++.+
T Consensus 936 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~--~~~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~ 1013 (1490)
T TIGR01271 936 DSVLALGFFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLN--TMKAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIV 1013 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 667778888999999999999999999999999999999999 788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHH
Q 047171 785 SLAYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRET 864 (1224)
Q Consensus 785 ~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~ 864 (1224)
++.++++++++|.+.+++++++.+.+.+...+.+..+...+......++..+++.|++.|+.|||+|++++++.+++.+.
T Consensus 1014 i~~l~~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~ 1093 (1490)
T TIGR01271 1014 LGAIFVVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKA 1093 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHH
Confidence 88888888888876543333322222222222333344444455566778999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 865 MKGPKKESIKQSWFSGIGLFSSQFLTTASITLT--FWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKG 942 (1224)
Q Consensus 865 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 942 (1224)
.+...+..+.......+......++..+....+ ++++. ..++.+.+..++.+......++..+...+.+++..
T Consensus 1094 ~~~~~~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~-----~~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~ 1168 (1490)
T TIGR01271 1094 LNLHTANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGT-----NQDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGL 1168 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987665544333333333333333222211111 11221 22445555555556666667778888889999999
Q ss_pred HHHHHHHHHHHccCCCCCCCCCC--------------CCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcE
Q 047171 943 SSAIRTIFTILDRKSEIDPEDPK--------------ASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKT 1008 (1224)
Q Consensus 943 ~~a~~ri~~~~~~~~~~~~~~~~--------------~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~ 1008 (1224)
+.+++|+.++++.+++....... ...+..||..|.|+|+||+|+|++. .+++|+|+||+|+|||+
T Consensus 1169 ~~s~eRi~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~-~~~vL~~is~~I~~Gek 1247 (1490)
T TIGR01271 1169 MRSVSRVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEA-GRAVLQDLSFSVEGGQR 1247 (1490)
T ss_pred HHHHHHHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCC-CcceeeccEEEEcCCCE
Confidence 99999999999876653211100 0111235667899999999999753 46799999999999999
Q ss_pred EEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHH
Q 047171 1009 VALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRK 1088 (1224)
Q Consensus 1009 vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~ 1088 (1224)
||||||||||||||+++|+|+|+ ++|+|+|||+|+++++++.+|++|+||||||+||+||||+||+++. .++|+++|+
T Consensus 1248 vaIvGrSGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~ 1325 (1490)
T TIGR01271 1248 VGLLGRTGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWK 1325 (1490)
T ss_pred EEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHH
Confidence 99999999999999999999998 7999999999999999999999999999999999999999999874 679999999
Q ss_pred HHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeE
Q 047171 1089 AAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTC 1168 (1224)
Q Consensus 1089 al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~Tv 1168 (1224)
|++.++++++|.++|+||||+|||+|.+|||||||||||||||+++|+|||||||||+||.+||+.|++.|++.+++|||
T Consensus 1326 aL~~~~L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~Tv 1405 (1490)
T TIGR01271 1326 VAEEVGLKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTV 1405 (1490)
T ss_pred HHHHCCCHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHHhhc
Q 047171 1169 VVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKMQAS 1219 (1224)
Q Consensus 1169 I~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~ 1219 (1224)
|+||||++++.+||+|+||++|+|+|.|+|++|++. +|.|++|++.+..
T Consensus 1406 I~IaHRl~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~--~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1406 ILSEHRVEALLECQQFLVIEGSSVKQYDSIQKLLNE--TSLFKQAMSAADR 1454 (1490)
T ss_pred EEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHHcC--CcHHHHHHHHhCh
Confidence 999999999999999999999999999999999975 8999999987654
No 9
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.7e-111 Score=983.39 Aligned_cols=576 Identities=37% Similarity=0.583 Sum_probs=547.4
Q ss_pred hHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 637 SSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHY 716 (1224)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 716 (1224)
..+++++.+.+++|+++..+.++.++........|++++++++.+...++. .......+..+.++.+++.++++++.+
T Consensus 133 ~~~~rl~~l~~~~~~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~--~~~~~~~~~~l~~l~~~~a~~~~~r~~ 210 (716)
T KOG0058|consen 133 TLLKRLLGLLKPEWKWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDS--ADALKRACTILLGLFLIGALANAIRGG 210 (716)
T ss_pred hHHHHHHHHhchhHHHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccch--HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 478899999999999999999999999999999999999999988762211 223344566778888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 717 NFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTW 796 (1224)
Q Consensus 717 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1224)
++.++++++..++|..+|+++++++++||| .|.+|++++|++.|+..+.+.++..+...+.+.+..++++++|++.+|
T Consensus 211 ~~~~a~~rv~~rlR~~lF~sil~QdiaFFD--~nktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~ 288 (716)
T KOG0058|consen 211 LLQYAGERVVARLRTDLFRSLLRQDIAFFD--ENKTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSW 288 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhc--cCCccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhH
Confidence 999999999999999999999999999999 788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHH
Q 047171 797 RVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQS 876 (1224)
Q Consensus 797 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~ 876 (1224)
.++++.++.+|++++...+++++.++.+++.+++.++.++...|.+.+++|||+|+.|+...++|.+..+...+...+..
T Consensus 289 ~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a 368 (716)
T KOG0058|consen 289 RLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEA 368 (716)
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 047171 877 WFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRK 956 (1224)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~ 956 (1224)
...++++....+...+....+++||+.++..|.+|.|++..+++|......++..+...++++.++..|.+|+++++|++
T Consensus 369 ~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~ 448 (716)
T KOG0058|consen 369 VAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRK 448 (716)
T ss_pred HHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCce
Q 047171 957 SEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGS 1036 (1224)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~ 1036 (1224)
|..++.. .. .+....|.|+|+||+|+||+||+.+||+|+||+|+|||.||+|||||+||||++++|+|||+|++|+
T Consensus 449 P~i~~~G-~~---~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~ 524 (716)
T KOG0058|consen 449 PRIPLTG-TL---APDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGR 524 (716)
T ss_pred CCCCCCC-cc---ccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCe
Confidence 8876541 11 1224678999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCC
Q 047171 1037 VMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQ 1116 (1224)
Q Consensus 1037 I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~ 1116 (1224)
|++||+||+++++++||++||+|.|||.||++||+|||.||.+.++||||++|+++|++||||..+|+||||.|||+|.+
T Consensus 525 IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~q 604 (716)
T KOG0058|consen 525 ILLDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQ 604 (716)
T ss_pred EEECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 047171 1117 LSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1117 LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~G 1196 (1224)
|||||||||||||||+|||+||||||||||||+++|..||++|++..+++|||+|||||+||++||+|+|+++|+|+|.|
T Consensus 605 LSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G 684 (716)
T KOG0058|consen 605 LSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMG 684 (716)
T ss_pred ccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChhHHhhcCCCchhHHHHHHhhccC
Q 047171 1197 TQSSLLSMGNGGAYYSLIKMQASRS 1221 (1224)
Q Consensus 1197 t~~eLl~~~~~g~y~~l~~~q~~~~ 1221 (1224)
||+||+++ ++|.|++|+++|....
T Consensus 685 ~h~eLl~~-~~gly~~Lv~~q~~~~ 708 (716)
T KOG0058|consen 685 THDELLSK-PNGLYAKLVQRQLDSG 708 (716)
T ss_pred cHHHHhhC-cccHHHHHHHHhcccC
Confidence 99999998 5799999999987543
No 10
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-107 Score=947.93 Aligned_cols=546 Identities=40% Similarity=0.591 Sum_probs=507.2
Q ss_pred chHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CCh-HHHHHH---HH--------HHHHHHHHH
Q 047171 3 TKGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGT-SDI-SISIEA---VD--------KVPEKGMCW 69 (1224)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-~~~-~~~~~~---~~--------~~~~~~~~~ 69 (1224)
.++|++.|+++.+ +++..+.++.++.+....+.|.+.|+++|.+.. .+. ..+... +. ..+++.+++
T Consensus 134 ~~~rl~~l~~~~~-~~l~~a~~~l~vss~~~~~iP~~~G~~id~~~~~~~~~~~~~~~~~~l~~l~~~~a~~~~~r~~~~ 212 (716)
T KOG0058|consen 134 LLKRLLGLLKPEW-KWLVAAFVLLLVSSLINMFIPYYLGKLIDTISEGDDSADALKRACTILLGLFLIGALANAIRGGLL 212 (716)
T ss_pred HHHHHHHHhchhH-HHHHHHHHHHHHHHhhcchhhHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678999999864 456788888888888888899999999998765 221 111110 00 017788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhH
Q 047171 70 TRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSW 149 (1224)
Q Consensus 70 ~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (1224)
.++++++..++|.++|+++++++++|||+ + ++|||+||++.|+..+.+.++..+...+.+++..++++++|+++||
T Consensus 213 ~~a~~rv~~rlR~~lF~sil~QdiaFFD~---n-ktGeL~SRLtsD~~~vs~svs~nls~~lR~~~~~~g~~~~M~~~S~ 288 (716)
T KOG0058|consen 213 QYAGERVVARLRTDLFRSLLRQDIAFFDE---N-KTGELISRLTSDTQIVSNSVSQNLSDGLRNLVQGFGGLGFMFSLSW 288 (716)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhcc---C-CccHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhhhhH
Confidence 99999999999999999999999999999 5 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 047171 150 RLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQG 229 (1224)
Q Consensus 150 ~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~ 229 (1224)
+|+++.++.+|+++++..+++++.++..++.|++.++.+.+++|.+++|||||+|+.|+.|.+||.+..++..+...|.+
T Consensus 289 ~Ltlv~~i~~P~v~~~~~~yG~~~rklS~~~Q~a~A~a~~vaeE~ls~~rTVRsfa~E~~E~~ry~~~l~~~~~i~~k~a 368 (716)
T KOG0058|consen 289 RLTLVTLIVVPIVALVAKIYGKYLRKLSKQTQDALARANQVAEEVLSAMRTVRSFAAEEQEVKRYNKKLREVLKLSKKEA 368 (716)
T ss_pred HHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC
Q 047171 230 LTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRV 308 (1224)
Q Consensus 230 ~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~ 308 (1224)
...+.+.... +..+...+.++++|++++..|.+|.|.+.+|++|......++..+...++.+.++..|.+|+||++|++
T Consensus 369 ~a~~~f~~~~~~~~~~~~~siL~~Gg~Lv~~g~mt~g~L~sFllY~~~~g~sl~~ls~~ys~lmkgvGAs~rvFel~dr~ 448 (716)
T KOG0058|consen 369 VAYGIFFGSTNLLGNLAVLSILFYGGHLVLTGSLTSGALSSFLLYQVQLGSSLSGLSSFYSELMKGVGASERVFELMDRK 448 (716)
T ss_pred HHhhHhHhHHHHHHhHHHHHHHHhccchhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHhccC
Confidence 9888888877 788888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcccccccccccccEEEEeEEEECCCCC-------------CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEE
Q 047171 309 PVINSEDEIGKTLAYLRGEIEFKDVDFSYPTRP-------------DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNIL 375 (1224)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~-------------~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~ 375 (1224)
|.++... ...+...+|.|+|+||+|+||.+| +|++||+||||||||||+++||.|||+|++|+|+
T Consensus 449 P~i~~~G--~~~p~~~~G~IeF~~VsFaYP~Rp~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~PtsG~Il 526 (716)
T KOG0058|consen 449 PRIPLTG--TLAPDHLQGVIEFEDVSFAYPTRPDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPTSGRIL 526 (716)
T ss_pred CCCCCCC--ccccccccceEEEEEeeeecCCCCCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 9876542 122225789999999999999875 5679999999999999999999999999999999
Q ss_pred ECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCC
Q 047171 376 LDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLS 455 (1224)
Q Consensus 376 ~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LS 455 (1224)
+||+||+++++.++|++||+|.|||.||++||+|||+||.+++++|++.+||++|++|+||.++|+||||.|||+|.+||
T Consensus 527 lDG~~i~~~~~~~lr~~Ig~V~QEPvLFs~sI~eNI~YG~~~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG~qLS 606 (716)
T KOG0058|consen 527 LDGVPISDINHKYLRRKIGLVGQEPVLFSGSIRENIAYGLDNATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKGSQLS 606 (716)
T ss_pred ECCeehhhcCHHHHHHHeeeeeccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecCh
Q 047171 456 GGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSH 535 (1224)
Q Consensus 456 gGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~ 535 (1224)
|||||||||||||++||.||||||||||||+++|..++++|++.++++|||+|||||+|+++||+|+|+++|+++|.|+|
T Consensus 607 GGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~~rTVlvIAHRLSTV~~Ad~Ivvi~~G~V~E~G~h 686 (716)
T KOG0058|consen 607 GGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQGRTVLVIAHRLSTVRHADQIVVIDKGRVVEMGTH 686 (716)
T ss_pred chHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhcCCeEEEEehhhhHhhhccEEEEEcCCeEEecccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhccCCCchHHHHHHHHHH
Q 047171 536 DVLMQMNNGEGGAYSKMVQLQQS 558 (1224)
Q Consensus 536 ~~l~~~~~~~~~~y~~~~~~~~~ 558 (1224)
+||+++. +|.|++++++|..
T Consensus 687 ~eLl~~~---~gly~~Lv~~q~~ 706 (716)
T KOG0058|consen 687 DELLSKP---NGLYAKLVQRQLD 706 (716)
T ss_pred HHHhhCc---ccHHHHHHHHhcc
Confidence 9999983 5899999988764
No 11
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.9e-99 Score=929.75 Aligned_cols=547 Identities=43% Similarity=0.662 Sum_probs=509.6
Q ss_pred chHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChHHH------HHH---HH------HHHHHHH
Q 047171 3 TKGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSDISIS------IEA---VD------KVPEKGM 67 (1224)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~------~~~---~~------~~~~~~~ 67 (1224)
.+.+++++.+|. |.++++|++++++.++..|++.+++++++..+...+.+.+ +.. .. ..+++.+
T Consensus 651 s~~~i~k~~~pe-~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~~~~~~~~~al~f~~l~~~~~i~~~~q~~ 729 (1228)
T KOG0055|consen 651 SFWRIFKLNKPE-WPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDELKREVRAWALIFLGLGIVSGITNFLQHY 729 (1228)
T ss_pred cHHHHHHhccch-hHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 477899999885 6678999999999999999999999999998864332211 110 00 1177899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Q 047171 68 CWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLL 147 (1224)
Q Consensus 68 ~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (1224)
++...++++..|+|...|+++++++.+|||+. ++ + |.|.+|+.+|...++..+.+.+..++.++..+++++++.|++
T Consensus 730 ~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~-~n-s-g~l~~RLa~Da~~vr~~v~~rl~~vv~~~~~~~~~iiiaf~~ 806 (1228)
T KOG0055|consen 730 FFGIAGEKLTKRLRSMMFRALLRQEVGWFDDP-EN-S-GALSSRLATDASNVRAAVGDRLSLVVQNIAAVIIGIIIAFIY 806 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC-cc-c-hHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999973 33 5 999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Q 047171 148 SWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIK 227 (1224)
Q Consensus 148 ~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~ 227 (1224)
+|+|+++++++.|++++..+...+.+.....+..+..++.+..+.|+++|||||++|+.|+++.+.|.+..++..+...|
T Consensus 807 ~W~lalv~la~~Pll~~~~~~~~~~~~~~~~~~~~~~~ea~~iA~eai~NIrTV~al~~e~~~~~~y~~~l~~p~~~~~~ 886 (1228)
T KOG0055|consen 807 GWRLALVVLATFPLLILSGYLQKKFLKGFSKDDKKAYEEASKIAIEAVSNIRTVAALCAEEKFMELYKEELEKPRKSSFK 886 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 047171 228 QGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMID 306 (1224)
Q Consensus 228 ~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~ 306 (1224)
.+.+.++..++. .+.++.+++.+|+|++++.+|.+++.+++.+++.+.+....+++.....+++.+|+.|+.+||+++|
T Consensus 887 ~~~i~gl~f~~sqs~~~~~~A~~f~~G~~Li~~g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~d 966 (1228)
T KOG0055|consen 887 RGLISGLGFGFSQSLLFFVYALSFWYGARLISNGEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILD 966 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhc
Confidence 999999999988 8999999999999999999999999999999888888888899989999999999999999999999
Q ss_pred cCCCCCCCcccccccccccccEEEEeEEEECCCCC-------------CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 047171 307 RVPVINSEDEIGKTLAYLRGEIEFKDVDFSYPTRP-------------DTPTIGLVGSSGSGKSTVISLLERFYDPVKGN 373 (1224)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~-------------~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 373 (1224)
++|+++.+++.+...++.+|+|+|+||+|+||.+| +|+++||||||||||||++.||.|||||++|.
T Consensus 967 r~~~i~~~~~~~~~~~~~~G~I~~~~V~F~YPsRP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~~G~ 1046 (1228)
T KOG0055|consen 967 RKPTIDPDSTSGGKLPNVKGDIEFRNVSFAYPTRPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPDAGK 1046 (1228)
T ss_pred CCCCCCCCCCCCCccccceeEEEEeeeEeeCCCCCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCCCCe
Confidence 99977665433444566889999999999999876 45699999999999999999999999999999
Q ss_pred EEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCC
Q 047171 374 ILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQ 453 (1224)
Q Consensus 374 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 453 (1224)
|.|||+|++++++++||++||.|.|||.||++||+|||+||.++++++|+.+||+.+++|+||.+||+||||.+||+|.+
T Consensus 1047 V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~~TIrENI~YG~~~vs~~eIi~Aak~ANaH~FI~sLP~GyDT~vGerG~Q 1126 (1228)
T KOG0055|consen 1047 VKIDGVDIKDLNLKWLRKQIGLVSQEPVLFNGTIRENIAYGSEEVSEEEIIEAAKLANAHNFISSLPQGYDTRVGERGVQ 1126 (1228)
T ss_pred EEECCcccccCCHHHHHHhcceeccCchhhcccHHHHHhccCCCCCHHHHHHHHHHhhhHHHHhcCcCcccCccCcccCc
Confidence 99999999999999999999999999999999999999999666899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeec
Q 047171 454 LSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESG 533 (1224)
Q Consensus 454 LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g 533 (1224)
||||||||||||||++|||+||||||+|||||.++|+.+|++|++++.|||+|+|||||+++++||.|+|+++|+|+|+|
T Consensus 1127 LSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~~gRT~IvIAHRLSTIqnaD~I~Vi~~G~VvE~G 1206 (1228)
T KOG0055|consen 1127 LSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAMEGRTTIVIAHRLSTIQNADVIAVLKNGKVVEQG 1206 (1228)
T ss_pred CCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhhcCCcEEEEecchhhhhcCCEEEEEECCEEEecc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHhhccCCCchHHHHHHHHH
Q 047171 534 SHDVLMQMNNGEGGAYSKMVQLQQ 557 (1224)
Q Consensus 534 ~~~~l~~~~~~~~~~y~~~~~~~~ 557 (1224)
||+||+++ +|.|.++++.|.
T Consensus 1207 tH~~L~~~----~G~Y~~Lv~~q~ 1226 (1228)
T KOG0055|consen 1207 THDELLAK----RGIYFRLVQLQS 1226 (1228)
T ss_pred cHHHHHhC----CCchHHHhhhcc
Confidence 99999997 899999998774
No 12
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=8.8e-93 Score=867.77 Aligned_cols=566 Identities=30% Similarity=0.456 Sum_probs=519.3
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 641 RLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAI 720 (1224)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 720 (1224)
+++....+.+..+.-.++.+++.++...+.|++...++|....... ........+.++++++...++.+++.+.+.+
T Consensus 144 ~f~~~~~~~~~~l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~---~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~ 220 (709)
T COG2274 144 WFIPLLFKYRRLLFEVLLASLLLQLLALATPLFSQIVIDKVLPDAS---RSTLTVLAIGLLLAALFEALLRLLRTYLIAH 220 (709)
T ss_pred hHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444555555555666666666777777777777776654322 2233345566777788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 721 MGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAI 800 (1224)
Q Consensus 721 ~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 800 (1224)
.+.++...+-.++++|++++|+.||+ ++++|++++|+ +|.+.+++++.......+..+.++++.++++++++|.+++
T Consensus 221 ~~~rld~~l~~~~~~hll~Lpl~~f~--~r~~Ge~~sR~-~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~l 297 (709)
T COG2274 221 LGKRLDLELSGRFFRHLLRLPLSYFE--KRSVGEIISRV-RELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTL 297 (709)
T ss_pred HHHHHhHHHHHHHHHHHHcCcHHHcc--CCChhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 67899999998 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 047171 801 VMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSG 880 (1224)
Q Consensus 801 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1224)
+.++.+|+.++..+...+..++..++..+..+...+++.|++.|++|||+.+.|.++..+|++...+..+..++......
T Consensus 298 i~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~~ 377 (709)
T COG2274 298 IVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLAL 377 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 047171 881 IGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEID 960 (1224)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 960 (1224)
+...+..++..++.++++|+|++++..|.+|.|.++++.+....+..|+..+...+.+++....+.+|+.++++.++|.+
T Consensus 378 ~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~~ 457 (709)
T COG2274 378 ILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQE 457 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988754
Q ss_pred CCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEEC
Q 047171 961 PEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVD 1040 (1224)
Q Consensus 961 ~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id 1040 (1224)
.+... ...++..|+|+|+||+|+|+.+ ++++|+|+||+|+|||+|||||+||||||||+|+|.|+|+|++|+|++|
T Consensus 458 ~~~~~---~~~~~~~g~I~~~nvsf~y~~~-~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~d 533 (709)
T COG2274 458 GDKTL---IHLPKLQGEIEFENVSFRYGPD-DPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLD 533 (709)
T ss_pred ccccc---ccccccCceEEEEEEEEEeCCC-CcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 33211 1234567899999999999855 3479999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1041 ERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1041 G~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
|+|+.+++++.+|++|+|||||++||+|||||||++++|++++|++++||+.+++|+||.++|.||||++||+|.+||||
T Consensus 534 g~dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGG 613 (709)
T COG2274 534 GVDLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGG 613 (709)
T ss_pred CEeHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhH
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSS 1200 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~e 1200 (1224)
|||||+||||+++||+||||||||||||++||+.|.+.|.+...+||+|+||||++++++||||+||++|||+|+|||+|
T Consensus 614 QrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~e 693 (709)
T COG2274 614 QRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEE 693 (709)
T ss_pred HHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCchhHHHHHHhh
Q 047171 1201 LLSMGNGGAYYSLIKMQA 1218 (1224)
Q Consensus 1201 Ll~~~~~g~y~~l~~~q~ 1218 (1224)
|++. +|.|+++|++|.
T Consensus 694 ll~~--~g~y~~l~~~q~ 709 (709)
T COG2274 694 LLAQ--GGLYARLYQQQE 709 (709)
T ss_pred HHHh--cChHHHHHhccC
Confidence 9997 899999998773
No 13
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=4.2e-90 Score=844.19 Aligned_cols=541 Identities=32% Similarity=0.450 Sum_probs=490.1
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC-ChHHHHHHH----HH-------HHHHHHHHHHH
Q 047171 5 GGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTS-DISISIEAV----DK-------VPEKGMCWTRT 72 (1224)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~----~~-------~~~~~~~~~~~ 72 (1224)
.++++...++++. +.-.++.+++..++....|++...++|.+... +.+.+.... .. .+++.++..+.
T Consensus 143 ~~f~~~~~~~~~~-l~~v~~~sl~l~i~~l~~p~~~q~viD~Vl~~~~~~tL~vl~ig~~~~~l~~~~l~~lr~~~~~~~ 221 (709)
T COG2274 143 SWFIPLLFKYRRL-LFEVLLASLLLQLLALATPLFSQIVIDKVLPDASRSTLTVLAIGLLLAALFEALLRLLRTYLIAHL 221 (709)
T ss_pred HhHHHHHHhhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555555555443 33344445555555556667889999987654 222221100 00 06788888999
Q ss_pred HHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 047171 73 AERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLA 152 (1224)
Q Consensus 73 ~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (1224)
+.++..++-.++|+|++++|++||++ + ++|++++|+. |.++|+++++..+...+.++.+.++.+++|++++|.|+
T Consensus 222 ~~rld~~l~~~~~~hll~Lpl~~f~~---r-~~Ge~~sR~~-el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~ 296 (709)
T COG2274 222 GKRLDLELSGRFFRHLLRLPLSYFEK---R-SVGEIISRVR-ELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLT 296 (709)
T ss_pred HHHHhHHHHHHHHHHHHcCcHHHccC---C-ChhhHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 5 9999999997 99999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 153 LAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTK 232 (1224)
Q Consensus 153 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (1224)
+++++.+|+++++..++.+.+++..++..+..++.++.+.|.++||++||+.+.|..+..+|++...++.+...+.....
T Consensus 297 li~l~~~~l~~l~~~~~~~~l~~~~~~~~~~~a~~~s~lvE~i~gi~tvK~~~~e~~~~~~w~~~~~~~~~~~~~~~~~~ 376 (709)
T COG2274 297 LIVLAAIPLNVLITLIFQPLLRRKTRKLIEESAEQQSFLVETIKGIETVKALAAEPRFRSQWDNRLAKQVNIGFKTEKLA 376 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhhhHHHHHhhhhHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Q 047171 233 GLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVI 311 (1224)
Q Consensus 233 ~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~ 311 (1224)
.....+. ++..++.++++|+|++++.+|.+|+|.+++|.+.......|+..+...+..++++..+.+|+.++++.+++.
T Consensus 377 ~~~~~~~~~l~~l~~v~iL~~G~~lVl~~~lTlG~LiAf~~l~~~f~~pi~~L~~~~~~~q~~~~~~~rL~dil~~~~E~ 456 (709)
T COG2274 377 LILNTIKSLLQQLSSVLILWFGAILVLEGELTLGQLVAFNMLAGYFISPITRLSQLWTDFQQAKVALERLGDILDTPPEQ 456 (709)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccc
Confidence 8887777 888888999999999999999999999999999999999999999999999999999999999999998874
Q ss_pred CCCcccccccccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCE
Q 047171 312 NSEDEIGKTLAYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGH 379 (1224)
Q Consensus 312 ~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~ 379 (1224)
+.+. .....++..|+|+|+||+|+|+.. ++++++||||+||||||||+|+|+|+|+|++|+|++||+
T Consensus 457 ~~~~-~~~~~~~~~g~I~~~nvsf~y~~~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~~G~I~~dg~ 535 (709)
T COG2274 457 EGDK-TLIHLPKLQGEIEFENVSFRYGPDDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQQGRILLDGV 535 (709)
T ss_pred cccc-ccccccccCceEEEEEEEEEeCCCCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCE
Confidence 4322 123455678999999999999755 256799999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHH
Q 047171 380 KIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQK 459 (1224)
Q Consensus 380 ~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~ 459 (1224)
|+.++++.++|++||||+||+.||+|||+|||++++|++++|++++||+.+++|+||.++|.||+|.+||+|.+||||||
T Consensus 536 dl~~i~~~~lR~~ig~V~Q~~~Lf~gSI~eNi~l~~p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~~LSGGQr 615 (709)
T COG2274 536 DLNDIDLASLRRQVGYVLQDPFLFSGSIRENIALGNPEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGANLSGGQR 615 (709)
T ss_pred eHHhcCHHHHHhheeEEcccchhhcCcHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCCCCCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHH
Q 047171 460 QRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLM 539 (1224)
Q Consensus 460 qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~ 539 (1224)
|||+|||||+++|+||||||||||||+++|+.|.+.|.+..+|+|+|+||||++++++||+|+||++|+|+++|+|+||+
T Consensus 616 QrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~~~~T~I~IaHRl~ti~~adrIiVl~~Gkiv~~gs~~ell 695 (709)
T COG2274 616 QRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQILQGRTVIIIAHRLSTIRSADRIIVLDQGKIVEQGSHEELL 695 (709)
T ss_pred HHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHhcCCeEEEEEccchHhhhccEEEEccCCceeccCCHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhccCCCchHHHHHHHH
Q 047171 540 QMNNGEGGAYSKMVQLQ 556 (1224)
Q Consensus 540 ~~~~~~~~~y~~~~~~~ 556 (1224)
+. +|.|.+++..|
T Consensus 696 ~~----~g~y~~l~~~q 708 (709)
T COG2274 696 AQ----GGLYARLYQQQ 708 (709)
T ss_pred Hh----cChHHHHHhcc
Confidence 98 89999998765
No 14
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4.5e-87 Score=829.13 Aligned_cols=562 Identities=35% Similarity=0.548 Sum_probs=505.5
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 640 LRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFA 719 (1224)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 719 (1224)
++++++.+ .+ .+.+++++.++........+++++.+++.... .......+..+++++.++..++.++..+...
T Consensus 5 ~~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 77 (567)
T COG1132 5 RRLLKYLK-YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLA-----DLGELLELLLLLLLLALLGGVLRALQSYLGS 77 (567)
T ss_pred HHHHHHHH-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444 55 66777777777777778888888888877651 1122333455566666678888888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 720 IMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVA 799 (1224)
Q Consensus 720 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 799 (1224)
+.+.+...++|.++++++++.|++||+ ++++|++++|+++|++.++..+......+...++..++.+++++..+|.++
T Consensus 78 ~~~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 155 (567)
T COG1132 78 RLGQKIVADLRRDLFEKLLRLPLSFFD--KAKSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWRLA 155 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHhC--cCCcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 888999999999999999999999999 667999999999999999999999866677678889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 047171 800 IVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFS 879 (1224)
Q Consensus 800 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (1224)
+++++..|+.........++.++..++.++..++..+.+.|.+.|+++||+|+.++...+++.+..+...+...+..+..
T Consensus 156 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (567)
T COG1132 156 LILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASRLE 235 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888887777776688888888889999999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 047171 880 GIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEI 959 (1224)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 959 (1224)
+....+..++..+..+++++++..++..+.++.|.+.+++.+......|+..+......+..+..+.+|++++++.+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~~~ 315 (567)
T COG1132 236 ALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEPEV 315 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence 88888999999999999999999999999999999999999999999999999999999999999999999999986653
Q ss_pred CCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEE
Q 047171 960 DPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMV 1039 (1224)
Q Consensus 960 ~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~i 1039 (1224)
...+.. .....+.|+|+||+|+|++ ++++|+|+||+|+|||++||||||||||||++++|+|+|+|++|+|+|
T Consensus 316 ~~~~~~-----~~~~~~~I~f~~vsf~y~~--~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~i 388 (567)
T COG1132 316 EDPPDP-----LKDTIGSIEFENVSFSYPG--KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILI 388 (567)
T ss_pred cCCCCC-----CCCCCCeEEEEEEEEEcCC--CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEE
Confidence 322111 1234567999999999973 457999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCCh
Q 047171 1040 DERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSG 1119 (1224)
Q Consensus 1040 dG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSG 1119 (1224)
||+|++++++++||++|++|||||+||++||+|||.+|+++++|||+++||+.++++|||.++|+||||.|||+|.+|||
T Consensus 389 dg~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSg 468 (567)
T COG1132 389 DGIDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSG 468 (567)
T ss_pred CCEehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChh
Q 047171 1120 GQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQS 1199 (1224)
Q Consensus 1120 GQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~ 1199 (1224)
|||||||||||++++|+|||||||||+||++||+.|++++++..++||+|+||||++++++||+|+||++|+|+|+|+|+
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~ 548 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHE 548 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHH
Confidence 99999999999999999999999999999999999999999888899999999999999999999999999999999999
Q ss_pred HHhhcCCCchhHHHHHHhhc
Q 047171 1200 SLLSMGNGGAYYSLIKMQAS 1219 (1224)
Q Consensus 1200 eLl~~~~~g~y~~l~~~q~~ 1219 (1224)
||+++ +|.|++||+.|..
T Consensus 549 eLl~~--~g~y~~l~~~~~~ 566 (567)
T COG1132 549 ELLAK--GGLYARLYQAQGG 566 (567)
T ss_pred HHHHc--CCHHHHHHHHhhc
Confidence 99997 8999999998864
No 15
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.2e-87 Score=832.31 Aligned_cols=570 Identities=21% Similarity=0.313 Sum_probs=492.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 638 SLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYN 717 (1224)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 717 (1224)
.+++++++.++.++.+++++++.++..++.+..|++++.+++.....+.. ......+..+++++.++..++.+++.+.
T Consensus 9 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (588)
T PRK11174 9 LTRWLKQQSKPAKRWLNLSILLGFLSGLLLIAQAWLLATILQALIIENIP--REALLPPFILLILLFVLRALLAWLRERV 86 (588)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35567777788888888888888999999999999999998865421111 1112334445566667788888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 718 FAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWR 797 (1224)
Q Consensus 718 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1224)
....+.++..++|.+++++++++|.+||+ ++++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.
T Consensus 87 ~~~~~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 164 (588)
T PRK11174 87 GFKAGQHIRQQIRQQVLDKLQQLGPAWIQ--GKPAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINWA 164 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCchhhc--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 6789999999999999999999999999999988888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHH
Q 047171 798 VAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSW 877 (1224)
Q Consensus 798 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 877 (1224)
+++++++++|+.+++.....+..++..++..+..++..+.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+
T Consensus 165 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 244 (588)
T PRK11174 165 AGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVLR 244 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888777777777777888888889999999999999999999999999999999999999888887777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 878 FSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQL---------FQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRT 948 (1224)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~r 948 (1224)
.......+..++..+..+++.+++++.+. |.+++|.+ +.++.+......|+..+...+..+.++..+.+|
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~r 323 (588)
T PRK11174 245 MAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAES 323 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666666555555555554443 67776654 112233334567888899999999999999999
Q ss_pred HHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhc
Q 047171 949 IFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIER 1028 (1224)
Q Consensus 949 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~r 1028 (1224)
+.++++.+++..+... . ..+.+..+.|+|+||+|.|++ ++++|+|+||+|+|||++|||||||||||||+++|+|
T Consensus 324 i~~~l~~~~~~~~~~~-~--~~~~~~~~~i~~~~vsf~~~~--~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g 398 (588)
T PRK11174 324 LVTFLETPLAHPQQGE-K--ELASNDPVTIEAEDLEILSPD--GKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLG 398 (588)
T ss_pred HHHHHcCCCcccCCCc-c--ccCCCCCceEEEEeeEEeccC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhc
Confidence 9999987653221111 0 011122357999999988763 3579999999999999999999999999999999999
Q ss_pred ccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhccccccc
Q 047171 1029 FYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDT 1108 (1224)
Q Consensus 1029 l~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt 1108 (1224)
+| |++|+|++||+|+++++.+++|++|+||||||+||+|||||||.+++|+++|||+++|++.|++++||.++|+||||
T Consensus 399 ~~-p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT 477 (588)
T PRK11174 399 FL-PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDT 477 (588)
T ss_pred CC-CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhccccccc
Confidence 99 99999999999999999999999999999999999999999999998899999999999999999999999999999
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 047171 1109 YCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIK 1188 (1224)
Q Consensus 1109 ~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~ 1188 (1224)
.+||+|.+||||||||||||||++++|+|||||||||+||++||+.|+++|++..+++|+|+||||++++++||+|+||+
T Consensus 478 ~vge~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~ 557 (588)
T PRK11174 478 PIGDQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQ 557 (588)
T ss_pred ccccCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999989999999999999999999999999
Q ss_pred CCEEEEecChhHHhhcCCCchhHHHHHHhhcc
Q 047171 1189 NGKVVEQGTQSSLLSMGNGGAYYSLIKMQASR 1220 (1224)
Q Consensus 1189 ~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~~ 1220 (1224)
+|+|+|+|+|+||+++ +|.|+++++.|.+.
T Consensus 558 ~G~i~e~G~~~eL~~~--~~~y~~l~~~q~~~ 587 (588)
T PRK11174 558 DGQIVQQGDYAELSQA--GGLFATLLAHRQEE 587 (588)
T ss_pred CCeEeecCCHHHHHhc--chHHHHHHHHhhcC
Confidence 9999999999999986 89999999988764
No 16
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.2e-85 Score=831.91 Aligned_cols=566 Identities=31% Similarity=0.483 Sum_probs=508.5
Q ss_pred chHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 636 PSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQH 715 (1224)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 715 (1224)
...+++++++.++.++.+..++++.++..++....|++.+.+++........ ........+++++.++..++.+++.
T Consensus 146 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (711)
T TIGR00958 146 ADLLFRLLGLSGRDWPWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGP---PALASAIFFMCLLSIASSVSAGLRG 222 (711)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467788888888888888888888888888889999999998876532111 1122234445556667788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 716 YNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVT 795 (1224)
Q Consensus 716 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1224)
+.+.+.+.++..++|.+++++++++|++||+ ++++|++++|+++|++.+++.+...+..++..++.+++.+++++.++
T Consensus 223 ~~~~~~~~~~~~~lr~~l~~~ll~~~~~~f~--~~~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s 300 (711)
T TIGR00958 223 GSFNYTMARINLRIREDLFRSLLRQDLGFFD--ENKTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLS 300 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999 67899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHH
Q 047171 796 WRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQ 875 (1224)
Q Consensus 796 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~ 875 (1224)
|.+++++++..|+.+++.....++.++..++.++..++..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+.
T Consensus 301 ~~l~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~ 380 (711)
T TIGR00958 301 PRLTMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRK 380 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888888888888888888899999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 047171 876 SWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDR 955 (1224)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 955 (1224)
.........+..++..+..++++++|++++..|.+++|.++++..+......++..+...+.++.++..+.+|+.++++.
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~ 460 (711)
T TIGR00958 381 ALAYAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDR 460 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 77777777777777778888888999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCc
Q 047171 956 KSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSG 1035 (1224)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G 1035 (1224)
+++.+.... . .+++..+.|+|+||+|+||++++.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|
T Consensus 461 ~~~~~~~~~--~--~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G 536 (711)
T TIGR00958 461 KPNIPLTGT--L--APLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGG 536 (711)
T ss_pred CCCCCCCCC--C--CCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCC
Confidence 655322111 0 122345689999999999876667899999999999999999999999999999999999999999
Q ss_pred eEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCC
Q 047171 1036 SVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGV 1115 (1224)
Q Consensus 1036 ~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~ 1115 (1224)
+|++||+|+++++.+++|++|+||||||++|+|||||||.++.++++||+++++++.+++++++.++|+||||.+||+|.
T Consensus 537 ~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~ 616 (711)
T TIGR00958 537 QVLLDGVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGS 616 (711)
T ss_pred EEEECCEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCC
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 047171 1116 QLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQ 1195 (1224)
Q Consensus 1116 ~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~ 1195 (1224)
+||||||||||||||++++|+|||||||||+||+++|+.|++ ....+++|+|+||||+++++.||+|+||++|+|+|+
T Consensus 617 ~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~ 694 (711)
T TIGR00958 617 QLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEM 694 (711)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEe
Confidence 999999999999999999999999999999999999999999 334578999999999999999999999999999999
Q ss_pred cChhHHhhcCCCchhHHHH
Q 047171 1196 GTQSSLLSMGNGGAYYSLI 1214 (1224)
Q Consensus 1196 Gt~~eLl~~~~~g~y~~l~ 1214 (1224)
|||+||+++ +|.|++|+
T Consensus 695 Gt~~eL~~~--~~~y~~lv 711 (711)
T TIGR00958 695 GTHKQLMED--QGCYKHLV 711 (711)
T ss_pred eCHHHHHhC--CCchHhcC
Confidence 999999986 78998874
No 17
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-85 Score=751.60 Aligned_cols=553 Identities=27% Similarity=0.361 Sum_probs=506.8
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 655 LGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKML 734 (1224)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 734 (1224)
+..++.++.++....++++++..+..++... .......++..++++.++..++.+.+....+.++.++...+|++++
T Consensus 4 i~~ll~~l~~i~~i~qa~llA~~l~~l~~~~---~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l 80 (559)
T COG4988 4 ISALLAVLSGIAIIAQAALLADILTKLIEGQ---LFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVL 80 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445566777778888888988888776532 1334455677788888899999999999999999999999999999
Q ss_pred HHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 735 EKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPLNIGCFY 814 (1224)
Q Consensus 735 ~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~ 814 (1224)
+++.+.+..|-. ..++|++.+.++..++.++.++..+++..+.+.+.....++.+++++|..++++++++|++.++++
T Consensus 81 ~~l~~~gp~~~~--~~~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMi 158 (559)
T COG4988 81 DKLAKLGPAFIA--QKPAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMI 158 (559)
T ss_pred HHHHhCChhhhc--CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 999999999888 678999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 815 SRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASI 894 (1224)
Q Consensus 815 ~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 894 (1224)
...+..+...++.-....+.++++.+.+.|+.|+|.|+..+...+++.+...+.++.+++.-+..-...++..+++++++
T Consensus 159 lvg~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsi 238 (559)
T COG4988 159 LVGLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSI 238 (559)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCC
Q 047171 895 TLTFWYAGRIMNQ-GLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEIDPEDPKASEDIEEP 973 (1224)
Q Consensus 895 ~~~~~~~~~l~~~-g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~ 973 (1224)
+++..|.+..... |.++....+.++....-+..|+..+...++.-..+.++.+.+..+++.+.+..++..... ..+.
T Consensus 239 AlvAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~--~~~~ 316 (559)
T COG4988 239 ALVAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAE--VANE 316 (559)
T ss_pred HHHHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccc--cccC
Confidence 9999888887777 899988888888888888899999999999999999999999999987665433221101 1122
Q ss_pred CcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHh
Q 047171 974 TKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLR 1053 (1224)
Q Consensus 974 ~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR 1053 (1224)
....++++|++|+||+. +++++|+||+++||+++||||+||||||||+++|+|+++|++|+|.+||+|+++++.+.||
T Consensus 317 ~~~ei~~~~l~~~y~~g--~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~ 394 (559)
T COG4988 317 PPIEISLENLSFRYPDG--KPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWR 394 (559)
T ss_pred CCceeeecceEEecCCC--CcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHH
Confidence 23356677999999854 3799999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1054 SCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
++++||||+|++|+|||||||.+++++.+||+++++++.+++.+|+.. |+|+||.+||+|.+|||||+|||++|||+++
T Consensus 395 k~i~~v~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~ 473 (559)
T COG4988 395 KQISWVSQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLS 473 (559)
T ss_pred hHeeeeCCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHH
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l 1213 (1224)
+++++|||||||+||.+||+.|.+.|.++.+++|||+||||++.+++||+|+|||+|+++|+|+|++|.++ +|.|++|
T Consensus 474 ~~~l~llDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~--~~~y~~l 551 (559)
T COG4988 474 PASLLLLDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK--QGLYANL 551 (559)
T ss_pred CCCEEEecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc--CcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987 8999999
Q ss_pred HHHhhc
Q 047171 1214 IKMQAS 1219 (1224)
Q Consensus 1214 ~~~q~~ 1219 (1224)
+.+|++
T Consensus 552 ~~~q~~ 557 (559)
T COG4988 552 LKQQEG 557 (559)
T ss_pred HHHHhc
Confidence 999876
No 18
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=4.3e-85 Score=816.31 Aligned_cols=544 Identities=21% Similarity=0.248 Sum_probs=467.8
Q ss_pred chHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC--CChHHHHHHH----H----H---HHHHHHHH
Q 047171 3 TKGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGT--SDISISIEAV----D----K---VPEKGMCW 69 (1224)
Q Consensus 3 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~--~~~~~~~~~~----~----~---~~~~~~~~ 69 (1224)
.++++++|.+++++ .+++++++.++..++.+..|+++++++|.+.. .+...+...+ . . .++..++.
T Consensus 9 ~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T PRK11174 9 LTRWLKQQSKPAKR-WLNLSILLGFLSGLLLIAQAWLLATILQALIIENIPREALLPPFILLILLFVLRALLAWLRERVG 87 (588)
T ss_pred hhHHHHHHhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35778889988754 45677888888888888899999999997642 1222111110 0 0 05566777
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhH
Q 047171 70 TRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSW 149 (1224)
Q Consensus 70 ~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (1224)
.+.+.++..++|.++|+|++++|.++|++ . ++|++++|+++|++.+++++.+.++.++.+++.++++++++++++|
T Consensus 88 ~~~~~~~~~~lr~~~~~~ll~~~~~~~~~---~-~~g~l~s~~~~dv~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 163 (588)
T PRK11174 88 FKAGQHIRQQIRQQVLDKLQQLGPAWIQG---K-PAGSWATLVLEQVEDMHDFYARYLPQMALAVLVPLLILIAVFPINW 163 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchhhcc---C-CHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999998 5 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 047171 150 RLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQG 229 (1224)
Q Consensus 150 ~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~ 229 (1224)
++++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++..+...+..
T Consensus 164 ~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~ 243 (588)
T PRK11174 164 AAGLILLGTAPLIPLFMALVGMGAADANRRNFLALARLSGHFLDRLRGLETLRLFNRGEAETESIRSASEDFRQRTMEVL 243 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999888899999999999999999999999999999999999999999999999999999998888877
Q ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 230 LTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLV---------FVAGICTILGGVGIMSALPNLSFISQATTAAT 299 (1224)
Q Consensus 230 ~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 299 (1224)
+..+...++. .+..+..+++++++++.+. |.+++|.+ ++++.+......|+..+...+..++++.++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~t~G~l~~~~~~~~~~~~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ 322 (588)
T PRK11174 244 RMAFLSSAVLEFFASISIALVAVYFGFSYL-GELNFGHYGTGVTLFAGFFVLILAPEFYQPLRDLGTFYHAKAQAVGAAE 322 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7766665555 4444444444455555443 77777754 22224445567899999999999999999999
Q ss_pred HHHHHhccCCCCCCCcccccccccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 047171 300 RIFEMIDRVPVINSEDEIGKTLAYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYD 368 (1224)
Q Consensus 300 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~ 368 (1224)
|+.++++.+++.+... ....+....++|+|+||+|.|++. ++|+++|||||||||||||+++|+|+|
T Consensus 323 ri~~~l~~~~~~~~~~-~~~~~~~~~~~i~~~~vsf~~~~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~- 400 (588)
T PRK11174 323 SLVTFLETPLAHPQQG-EKELASNDPVTIEAEDLEILSPDGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL- 400 (588)
T ss_pred HHHHHHcCCCcccCCC-ccccCCCCCceEEEEeeEEeccCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-
Confidence 9999998765322111 101111123579999999877532 367799999999999999999999999
Q ss_pred CCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhcccccccccc
Q 047171 369 PVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVG 448 (1224)
Q Consensus 369 ~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~ 448 (1224)
|++|+|++||+|+++++.+++|++|+||+|||+||++||+|||++|+|++++++++++|+.+++++|++++|+||||.+|
T Consensus 401 p~~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~~TI~eNI~~g~~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vg 480 (588)
T PRK11174 401 PYQGSLKINGIELRELDPESWRKHLSWVGQNPQLPHGTLRDNVLLGNPDASDEQLQQALENAWVSEFLPLLPQGLDTPIG 480 (588)
T ss_pred CCCcEEEECCEecccCCHHHHHhheEEecCCCcCCCcCHHHHhhcCCCCCCHHHHHHHHHHhCHHHHHHhcccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCce
Q 047171 449 QFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGR 528 (1224)
Q Consensus 449 ~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~ 528 (1224)
|+|.+|||||||||+||||+++||+|||||||||+||+++|+.|+++|+++.+++|+|+||||++++++||+|++|++|+
T Consensus 481 e~G~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~~~~TvIiItHrl~~i~~aD~Iivl~~G~ 560 (588)
T PRK11174 481 DQAAGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAASRRQTTLMVTHQLEDLAQWDQIWVMQDGQ 560 (588)
T ss_pred cCCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhCCCEEEEEecChHHHHhCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred EEeecChHHHHhhccCCCchHHHHHHHHHH
Q 047171 529 VIESGSHDVLMQMNNGEGGAYSKMVQLQQS 558 (1224)
Q Consensus 529 i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~ 558 (1224)
|+|+|+|+||+++ ++.|+++++.|..
T Consensus 561 i~e~G~~~eL~~~----~~~y~~l~~~q~~ 586 (588)
T PRK11174 561 IVQQGDYAELSQA----GGLFATLLAHRQE 586 (588)
T ss_pred EeecCCHHHHHhc----chHHHHHHHHhhc
Confidence 9999999999987 8899999987653
No 19
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=5.7e-84 Score=818.16 Aligned_cols=562 Identities=25% Similarity=0.321 Sum_probs=499.0
Q ss_pred HHHHHHH-hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 639 LLRLLRM-SAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYN 717 (1224)
Q Consensus 639 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 717 (1224)
++++++. .++.++.+...++++++..++....|+++..+++....... ......+++.++++.++..++.+++.+.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 199 (686)
T TIGR03797 123 LRDLLRFALRGARRDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDAD---RSLLVQIALALLAAAVGAAAFQLAQSLA 199 (686)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444443 34555566666667777777777788888888876653211 1122334555666677788899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 718 FAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWR 797 (1224)
Q Consensus 718 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1224)
....+.++..++|.+++++++++|++||+ +.++|++++|+. |++.+++.+...+...+......++.+++++.++|.
T Consensus 200 ~~~~~~~~~~~l~~~~~~~ll~~~~~~~~--~~~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (686)
T TIGR03797 200 VLRLETRMDASLQAAVWDRLLRLPVSFFR--QYSTGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWK 276 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHC--CCChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 678999999997 799999998887777777777777888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHH
Q 047171 798 VAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSW 877 (1224)
Q Consensus 798 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 877 (1224)
+++++++++|+.+++.+...+..++..++..+..++..+.+.|+++|+++||+++.|+++.++|++..++..+...+...
T Consensus 277 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 356 (686)
T TIGR03797 277 LALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQR 356 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888888888888888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 047171 878 FSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKS 957 (1224)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 957 (1224)
...+...+..++..+..++++|+|++++..|.+|.|.++++..+......|+..+...+.++..+..+.+|+.++++.++
T Consensus 357 ~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 436 (686)
T TIGR03797 357 IENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALP 436 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceE
Q 047171 958 EIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSV 1037 (1224)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1037 (1224)
+.+... . .+.+..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|
T Consensus 437 e~~~~~---~--~~~~~~~~I~~~nvsf~Y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I 510 (686)
T TIGR03797 437 EVDEAK---T--DPGKLSGAIEVDRVTFRYRPD-GPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSV 510 (686)
T ss_pred ccccCc---C--CCCCCCceEEEEEEEEEcCCC-CccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEE
Confidence 432111 0 112234689999999999743 4579999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCC
Q 047171 1038 MVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQL 1117 (1224)
Q Consensus 1038 ~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~L 1117 (1224)
++||+|+++++++++|++|+||||||++|+|||||||.++++ ++|+++++|++.++++++|.++|+||||.+||+|.+|
T Consensus 511 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~L 589 (686)
T TIGR03797 511 FYDGQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTL 589 (686)
T ss_pred EECCEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCC
Confidence 999999999999999999999999999999999999999988 8999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 047171 1118 SGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1118 SGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt 1197 (1224)
||||||||+||||++++|+|||||||||+||++||+.|++.|++. ++|+|+||||+++++.||+|+||++|+|+|+|+
T Consensus 590 SGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~ 667 (686)
T TIGR03797 590 SGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGT 667 (686)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECC
Confidence 999999999999999999999999999999999999999999886 689999999999999999999999999999999
Q ss_pred hhHHhhcCCCchhHHHHHHh
Q 047171 1198 QSSLLSMGNGGAYYSLIKMQ 1217 (1224)
Q Consensus 1198 ~~eLl~~~~~g~y~~l~~~q 1217 (1224)
|+||+++ +|.|++|++.|
T Consensus 668 ~~~Ll~~--~~~y~~l~~~q 685 (686)
T TIGR03797 668 YDELMAR--EGLFAQLARRQ 685 (686)
T ss_pred HHHHHhC--CcHHHHHHHhc
Confidence 9999986 89999999866
No 20
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.6e-84 Score=803.18 Aligned_cols=541 Identities=35% Similarity=0.544 Sum_probs=485.8
Q ss_pred cchHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChHHHHH--------HHHHH---HHHHHHHH
Q 047171 2 GTKGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSDISISIE--------AVDKV---PEKGMCWT 70 (1224)
Q Consensus 2 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~--------~~~~~---~~~~~~~~ 70 (1224)
..+++++++.+ .+ .+++++++.++..++....|++++.++|.+... ...... .+... ++..++..
T Consensus 2 ~~~~~l~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 77 (567)
T COG1132 2 SLLRRLLKYLK--YK-LLLLAILLLLLSALLSLLLPLLIGRIIDALLAD-LGELLELLLLLLLLALLGGVLRALQSYLGS 77 (567)
T ss_pred hhHHHHHHHHH--HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566777766 34 556777777777788888889999999987621 111110 00000 45566777
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 047171 71 RTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWR 150 (1224)
Q Consensus 71 ~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (1224)
+.+.++..++|.++|++++++|+++|++ . ++|++++|+++|++.++..+.+....+...++++++.+++++..+|.
T Consensus 78 ~~~~~~~~~lr~~~~~~l~~~~~~~~~~---~-~~g~l~~~~t~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (567)
T COG1132 78 RLGQKIVADLRRDLFEKLLRLPLSFFDK---A-KSGDLISRLTNDVEAVSNLVSTVLVLVFTSILLLIGSLVLLFSLSWR 153 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCHHHhCc---C-CcchHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 7889999999999999999999999998 4 89999999999999999999998666666788999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 151 LALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGL 230 (1224)
Q Consensus 151 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 230 (1224)
+++++++..|++.++..++.++.++..++.++..+++++.+.|.++|+++||+|+.++.+.++|.+..++..+...+...
T Consensus 154 l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~f~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (567)
T COG1132 154 LALILLLILPLLALVLSLLARKSRKLSRRVREALGELNARLLESLSGIRVIKAFGAEDRELKRFEEANEELRRANLRASR 233 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888999999999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 047171 231 TKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVP 309 (1224)
Q Consensus 231 ~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 309 (1224)
..+...+.. .+..+...+++++|++++..+.+++|.+++++.+......|+..+...+..++++..+++|++++++.+|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~ri~~~l~~~~ 313 (567)
T COG1132 234 LEALLAPLMLLLSSLGTVLVLALGGFLVLSGSLTVGALAAFILYLLRLLTPILQLGEVVSLLQRASAAAERLFELLDEEP 313 (567)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 888887776 7778888889999999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCCCcccccccccccccEEEEeEEEECCC-C----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECC
Q 047171 310 VINSEDEIGKTLAYLRGEIEFKDVDFSYPT-R----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDG 378 (1224)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~-~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g 378 (1224)
++.+.+. ......++|+|+||+|+|++ . ++++++||||||||||||++++|+|+|+|++|+|++||
T Consensus 314 ~~~~~~~---~~~~~~~~I~f~~vsf~y~~~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~~G~I~idg 390 (567)
T COG1132 314 EVEDPPD---PLKDTIGSIEFENVSFSYPGKKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPTSGEILIDG 390 (567)
T ss_pred cccCCCC---CCCCCCCeEEEEEEEEEcCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECC
Confidence 6443321 12334578999999999984 2 36779999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHH
Q 047171 379 HKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQ 458 (1224)
Q Consensus 379 ~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 458 (1224)
+|+++++.+++|++|++|+|||+||++||+|||.+|+|++++||+++||+.+++||||+++|+||||.+||+|.+|||||
T Consensus 391 ~dI~~i~~~~lr~~I~~V~Qd~~LF~~TI~~NI~~g~~~at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~G~~LSgGQ 470 (567)
T COG1132 391 IDIRDISLDSLRKRIGIVSQDPLLFSGTIRENIALGRPDATDEEIEEALKLANAHEFIANLPDGYDTIVGERGVNLSGGQ 470 (567)
T ss_pred EehhhcCHHHHHHhccEEcccceeecccHHHHHhcCCCCCCHHHHHHHHHHhChHHHHHhCcccccceecCCCccCCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHH
Q 047171 459 KQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVL 538 (1224)
Q Consensus 459 ~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l 538 (1224)
|||||||||+++||||||||||||+||++||+.|++++.++.++||+|+||||++++++||+|+||++|+|+|.|+|+||
T Consensus 471 rQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~~rT~iiIaHRlsti~~aD~IiVl~~G~i~e~G~h~eL 550 (567)
T COG1132 471 RQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLKGRTTLIIAHRLSTIKNADRIIVLDNGRIVERGTHEEL 550 (567)
T ss_pred HHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhcCCEEEEEeccHhHHHhCCEEEEEECCEEEEecCHHHH
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred HhhccCCCchHHHHHHHHH
Q 047171 539 MQMNNGEGGAYSKMVQLQQ 557 (1224)
Q Consensus 539 ~~~~~~~~~~y~~~~~~~~ 557 (1224)
+++ +|.|+++|+.|.
T Consensus 551 l~~----~g~y~~l~~~~~ 565 (567)
T COG1132 551 LAK----GGLYARLYQAQG 565 (567)
T ss_pred HHc----CCHHHHHHHHhh
Confidence 998 899999998775
No 21
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=1.5e-83 Score=817.07 Aligned_cols=564 Identities=23% Similarity=0.324 Sum_probs=501.8
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 638 SLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYN 717 (1224)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 717 (1224)
.+++++++.++.++.+...++++++..++..+.|+++..+++....... ......+++.++++.++..++.+++.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 219 (708)
T TIGR01193 143 SLLKFIPLITRQKKLIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKM---MGTLGIISIGLIIAYIIQQILSYIQIFL 219 (708)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555666666777777777777777788888889999998887653221 1112233444555666778888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 718 FAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWR 797 (1224)
Q Consensus 718 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1224)
..+.+.++..++|.+++++++++|+.||+ +.++|++++|++ |.+.+.+.+.......+..++.+++.++++++++|.
T Consensus 220 ~~~~~~~~~~~l~~~~~~~ll~l~~~~f~--~~~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 296 (708)
T TIGR01193 220 LNVLGQRLSIDIILSYIKHLFELPMSFFS--TRRTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNML 296 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCchhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999999999999 678999999998 899999988887777777777777888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHH
Q 047171 798 VAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSW 877 (1224)
Q Consensus 798 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 877 (1224)
+++++++.+|+.+++.+...+..++..++..+..++..+.+.|+++|+++||+++.|+.+.++|.+......+...+...
T Consensus 297 l~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 376 (708)
T TIGR01193 297 LFLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQK 376 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999888888888888888888888899999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 047171 878 FSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKS 957 (1224)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 957 (1224)
.......+..++..+..++++|+|++++..|.+|+|.++++..+......|+..+...+.++..+..+.+|+.++++.++
T Consensus 377 ~~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 456 (708)
T TIGR01193 377 ADQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDS 456 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888888888888888899999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceE
Q 047171 958 EIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSV 1037 (1224)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1037 (1224)
+.+...... ..++..|.|+|+||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|
T Consensus 457 e~~~~~~~~---~~~~~~~~I~~~~vsf~y~~--~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I 531 (708)
T TIGR01193 457 EFINKKKRT---ELNNLNGDIVINDVSYSYGY--GSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEI 531 (708)
T ss_pred ccccccccc---CCCCCCCcEEEEEEEEEcCC--CCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEE
Confidence 532211100 11234578999999999973 3579999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccC-CCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCC
Q 047171 1038 MVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYG-KEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQ 1116 (1224)
Q Consensus 1038 ~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~-~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~ 1116 (1224)
++||+|+++++++++|++|+||||||+||+|||||||.++ +++++|+++++|++.++++++|.++|+||||.+||+|.+
T Consensus 532 ~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~ 611 (708)
T TIGR01193 532 LLNGFSLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSS 611 (708)
T ss_pred EECCEEHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCC
Confidence 9999999999999999999999999999999999999998 578899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 047171 1117 LSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1117 LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~G 1196 (1224)
|||||||||+||||++++|+|||||||||+||++||+.+++.|++. +++|+|+||||+++++.||+|+||++|+++|.|
T Consensus 612 LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G 690 (708)
T TIGR01193 612 ISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQG 690 (708)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEEC
Confidence 9999999999999999999999999999999999999999999875 789999999999999999999999999999999
Q ss_pred ChhHHhhcCCCchhHHHHH
Q 047171 1197 TQSSLLSMGNGGAYYSLIK 1215 (1224)
Q Consensus 1197 t~~eLl~~~~~g~y~~l~~ 1215 (1224)
+|+||+++ +|.|++||+
T Consensus 691 ~~~~L~~~--~~~y~~l~~ 707 (708)
T TIGR01193 691 SHDELLDR--NGFYASLIH 707 (708)
T ss_pred CHHHHHhc--CCcHHHHhh
Confidence 99999986 899999985
No 22
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=5.3e-83 Score=790.68 Aligned_cols=566 Identities=23% Similarity=0.326 Sum_probs=491.5
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCch-hhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 640 LRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDS-KLKSETRLYCLIFLGLAFLTLIANLIQHYNF 718 (1224)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 718 (1224)
++++++.++.++.+++++++.++..++....+++++.+++........ ........+...+++++++..++.++..+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (574)
T PRK11160 5 LPFLKLYKRHWFMLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYGERLVS 84 (574)
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556666677777788888887777778888888888755322110 0000111123344556677888889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 719 AIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRV 798 (1224)
Q Consensus 719 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 798 (1224)
...+.++..++|.++|++++++|+.+|+ +.++|++++|+++|++.++.++...+..++..++.++++++++++++|.+
T Consensus 85 ~~~~~~~~~~lR~~l~~~l~~~~~~~~~--~~~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 162 (574)
T PRK11160 85 HDATFRVLTHLRVFTFSKLLPLSPAGLA--RYRQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGLSFFDLTL 162 (574)
T ss_pred HHHHHHHHHHHHHHHHHHhhccChHhhc--cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 67899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHH
Q 047171 799 AIVMIAVQPLNIGC-FYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSW 877 (1224)
Q Consensus 799 ~lv~l~~~pl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 877 (1224)
++++++++|+..++ .+...+..++..++.++..++..+.+.|.+.|+++||+|+.|+++.++|.+..++..+...+...
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 242 (574)
T PRK11160 163 ALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLAAQRRQAN 242 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888877766543 45556666777778888889999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 047171 878 FSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMS-TGKNIADAGSMTSDIAKGSSAIRTIFTILDRK 956 (1224)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~ 956 (1224)
..+....+..++..+..++++++|++++ .|.++.|.+++++.+... ...++..+...+..+.++..+.+|+.++++.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~i~~~g~~~~-~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri~~ll~~~ 321 (574)
T PRK11160 243 LTGLSQALMILANGLTVVLMLWLAAGGV-GGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRINEITEQK 321 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-ccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8888888888888888888889999884 788999998887665433 44577778888999999999999999999876
Q ss_pred CCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCce
Q 047171 957 SEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGS 1036 (1224)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~ 1036 (1224)
++.+..+. . ...+..+.|+|+||+|+|+++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+
T Consensus 322 ~~~~~~~~--~--~~~~~~~~i~~~~v~f~y~~~-~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~~G~ 396 (574)
T PRK11160 322 PEVTFPTT--S--TAAADQVSLTLNNVSFTYPDQ-PQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQQGE 396 (574)
T ss_pred CCCCCCcc--c--CCCCCCCeEEEEEEEEECCCC-CCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCce
Confidence 54321111 0 111234679999999999743 346999999999999999999999999999999999999999999
Q ss_pred EEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCC
Q 047171 1037 VMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQ 1116 (1224)
Q Consensus 1037 I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~ 1116 (1224)
|++||+|+++++.+++|++|+||||||++|++||+|||.+++++.+|++++++++.+++++++.+ |+||||.+||+|.+
T Consensus 397 I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge~g~~ 475 (574)
T PRK11160 397 ILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGEGGRQ 475 (574)
T ss_pred EEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcCCCCC
Confidence 99999999999999999999999999999999999999999888999999999999999999999 99999999999999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 047171 1117 LSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1117 LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~G 1196 (1224)
||||||||||||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|++|++|+++|.|
T Consensus 476 LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i~~~g 555 (574)
T PRK11160 476 LSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQIIEQG 555 (574)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeEEEeC
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChhHHhhcCCCchhHHHHHH
Q 047171 1197 TQSSLLSMGNGGAYYSLIKM 1216 (1224)
Q Consensus 1197 t~~eLl~~~~~g~y~~l~~~ 1216 (1224)
+|+||+++ +|.|++||+.
T Consensus 556 ~~~~l~~~--~g~y~~l~~~ 573 (574)
T PRK11160 556 THQELLAQ--QGRYYQLKQR 573 (574)
T ss_pred CHHHHHhc--CcHHHHHHhh
Confidence 99999987 8999999863
No 23
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=4.8e-83 Score=813.54 Aligned_cols=566 Identities=25% Similarity=0.332 Sum_probs=500.2
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 638 SLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYN 717 (1224)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 717 (1224)
.++.+++..++.++.+...++++++..++..+.|++...+++........ .....+.+.++++.++..++.+++.+.
T Consensus 141 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~ 217 (710)
T TIGR03796 141 LLRALWRRLRGSRGALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQ---DWLRPLLLGMGLTALLQGVLTWLQLYY 217 (710)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCh---hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555556666666666666777777777888888888765532211 112234445556667778889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 718 FAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWR 797 (1224)
Q Consensus 718 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1224)
....+.++..++|.+++++++++|++||+ +.++|++++|+++| +.+++++...+...+..++.+++.+++++.++|.
T Consensus 218 ~~~~~~~~~~~l~~~~~~~ll~l~~~~~~--~~~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 294 (710)
T TIGR03796 218 LRRLQIKLAVGMSARFLWHILRLPVRFFA--QRHAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPV 294 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHHc--CCcccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 67899999999988 6799998888888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHH
Q 047171 798 VAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSW 877 (1224)
Q Consensus 798 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 877 (1224)
+++++++.+|+.+++.+...+..++..++..+..++..+.+.|.++|+++||+++.|+.+.++|.+...+..+...+...
T Consensus 295 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 374 (710)
T TIGR03796 295 LTLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGV 374 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888888888888877888888888999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 047171 878 FSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKS 957 (1224)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 957 (1224)
...+...+..++..+..++++++|++++..|.+|.|.++++..+......|+..+...+.++..+..+.+|+.++++.++
T Consensus 375 ~~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~ 454 (710)
T TIGR03796 375 LTQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPV 454 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88888888888888899999999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCCC-C-CCCC-CCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCC
Q 047171 958 EIDPEDPKA-S-EDIE-EPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQS 1034 (1224)
Q Consensus 958 ~~~~~~~~~-~-~~~~-~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~ 1034 (1224)
+........ . ...+ ++..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++
T Consensus 455 e~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~-~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~ 533 (710)
T TIGR03796 455 DPLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPL-EPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWS 533 (710)
T ss_pred ccccccccccccccccCCCCCCeEEEEEEEEecCCC-CCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCC
Confidence 532211000 0 0011 2235789999999999853 4579999999999999999999999999999999999999999
Q ss_pred ceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCC
Q 047171 1035 GSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERG 1114 (1224)
Q Consensus 1035 G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G 1114 (1224)
|+|.+||+|+++++.+++|++|+||||||++|+|||||||.+++++++|+++++|++.++++++|.++|+||||.+||+|
T Consensus 534 G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G 613 (710)
T TIGR03796 534 GEILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGG 613 (710)
T ss_pred cEEEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCC
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 047171 1115 VQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVE 1194 (1224)
Q Consensus 1115 ~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive 1194 (1224)
.+|||||||||+||||++++|+|||||||||+||++||+.|.+.|++ .++|+|+||||+++++.||+|+||++|+|+|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~ 691 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQ 691 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEE
Confidence 99999999999999999999999999999999999999999999987 4899999999999999999999999999999
Q ss_pred ecChhHHhhcCCCchhHHHH
Q 047171 1195 QGTQSSLLSMGNGGAYYSLI 1214 (1224)
Q Consensus 1195 ~Gt~~eLl~~~~~g~y~~l~ 1214 (1224)
.|+|+||+++ +|.|++|+
T Consensus 692 ~G~~~~Ll~~--~~~y~~l~ 709 (710)
T TIGR03796 692 RGTHEELWAV--GGAYARLI 709 (710)
T ss_pred ecCHHHHHHc--CCcHHHHh
Confidence 9999999986 89999987
No 24
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=5.3e-83 Score=847.66 Aligned_cols=543 Identities=29% Similarity=0.406 Sum_probs=461.8
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCC-hH------HHHHHHH---H---HHHHHHHHHH
Q 047171 5 GGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSD-IS------ISIEAVD---K---VPEKGMCWTR 71 (1224)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~------~~~~~~~---~---~~~~~~~~~~ 71 (1224)
.+++++.+++++ .++++++++++.+++.|++|+++++++|.+.... .. .++..+. . .+++.++..+
T Consensus 814 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~l~~~~~~~ 892 (1466)
T PTZ00265 814 RIVYREIFSYKK-DVTIIALSILVAGGLYPVFALLYAKYVSTLFDFANLEANSNKYSLYILVIAIAMFISETLKNYYNNV 892 (1466)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455666655544 3677888889999999999999999999764321 10 0110110 0 1677888899
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047171 72 TAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRL 151 (1224)
Q Consensus 72 ~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (1224)
.++++..++|.++|++++++|++|||+ +.+ ++|++++|+++|++.+++++...+..++..+++++++++++++++|.+
T Consensus 893 ~~~~~~~~lR~~lf~~ll~~~~~~fd~-~~~-~~G~l~srl~~Dv~~l~~~~~~~l~~~~~~i~~~i~~~~~~~~~~~~l 970 (1466)
T PTZ00265 893 IGEKVEKTMKRRLFENILYQEISFFDQ-DKH-APGLLSAHINRDVHLLKTGLVNNIVIFTHFIVLFLVSMVMSFYFCPIV 970 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCC-CCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999984 113 899999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----------------HHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHH
Q 047171 152 ALAALPFSLLFIVPGIVFGKVLKDLG-AQ-----------------GKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKR 213 (1224)
Q Consensus 152 ~l~~l~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~ 213 (1224)
++++++++|+ +...+.++.+... ++ .++..++.+..++|.++||++||+|+.|+.+.++
T Consensus 971 ~l~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~l~gi~tVka~~~e~~~~~~ 1047 (1466)
T PTZ00265 971 AAVLTGTYFI---FMRVFAIRARLTANKDVEKKEINQPGTVFAYNSDDEIFKDPSFLIQEAFYNMNTVIIYGLEDYFCNL 1047 (1466)
T ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHhhhccccccccchhhhHHHHHHHHHHHHHHHhcHHHHHHhcchHHHHHH
Confidence 8776544333 3344444333211 11 2344677899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 214 FSLALRKNMELGIKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFIS 292 (1224)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (1224)
|.+..++..+...+.....++..++. .+.+++.++++|+|++++..|.+++|+++++++++.+...++..+...+..++
T Consensus 1048 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~lv~~g~it~g~l~~~~~~~~~~~~~~~~l~~~~~~~~ 1127 (1466)
T PTZ00265 1048 IEKAIDYSNKGQKRKTLVNSMLWGFSQSAQLFINSFAYWFGSFLIRRGTILVDDFMKSLFTFLFTGSYAGKLMSLKGDSE 1127 (1466)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888888888888888777 67777788899999999999999999999988776666667788888899999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCcccccc---cccccccEEEEeEEEECCCCC-------------CCCEEEEEcCCCCcH
Q 047171 293 QATTAATRIFEMIDRVPVINSEDEIGKT---LAYLRGEIEFKDVDFSYPTRP-------------DTPTIGLVGSSGSGK 356 (1224)
Q Consensus 293 ~~~~s~~ri~~~l~~~~~~~~~~~~~~~---~~~~~~~i~~~~v~f~y~~~~-------------~~~~~~ivG~sGsGK 356 (1224)
++.++++|++++++.+++++..+..+.. .+...|.|+|+||+|+||+++ +++++||||||||||
T Consensus 1128 ~a~~a~~ri~~ll~~~~~~~~~~~~~~~~~~~~~~~g~I~f~nVsF~Y~~~~~~~vL~~lsl~i~~G~~vAIVG~SGsGK 1207 (1466)
T PTZ00265 1128 NAKLSFEKYYPLIIRKSNIDVRDNGGIRIKNKNDIKGKIEIMDVNFRYISRPNVPIYKDLTFSCDSKKTTAIVGETGSGK 1207 (1466)
T ss_pred HHHHHHHHHHHHHCCCCcCCCCCCcccccccCCCCCceEEEEEEEEECCCCCCCccccCeeEEEcCCCEEEEECCCCCCH
Confidence 9999999999999987654321111111 123457899999999997432 456999999999999
Q ss_pred HHHHHHHhcCCCC------------------------------------------------------CCcEEEECCEecC
Q 047171 357 STVISLLERFYDP------------------------------------------------------VKGNILLDGHKIK 382 (1224)
Q Consensus 357 STl~~ll~~~~~~------------------------------------------------------~~G~i~~~g~~~~ 382 (1224)
|||++||+|+|+| ++|+|++||+|++
T Consensus 1208 STl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~ 1287 (1466)
T PTZ00265 1208 STVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDIC 1287 (1466)
T ss_pred HHHHHHHHHhCCCccccccccccccccccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHH
Confidence 9999999999999 6999999999999
Q ss_pred CCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHH
Q 047171 383 KLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRI 462 (1224)
Q Consensus 383 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qri 462 (1224)
+++.+++|++||||+|||+||++||+|||+||+|+++++++++||+.+++|+||.+||+||||.|||+|.+|||||||||
T Consensus 1288 ~~~~~~lR~~i~~V~Qep~LF~gTIreNI~~g~~~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G~~LSGGQkQRI 1367 (1466)
T PTZ00265 1288 DYNLKDLRNLFSIVSQEPMLFNMSIYENIKFGKEDATREDVKRACKFAAIDEFIESLPNKYDTNVGPYGKSLSGGQKQRI 1367 (1466)
T ss_pred hCCHHHHHhhccEeCCCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCCCcCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhccCEEEEEeC----ceEE-eecCh
Q 047171 463 AIARALIRDPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQS----GRVI-ESGSH 535 (1224)
Q Consensus 463 aiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~----G~i~-~~g~~ 535 (1224)
||||||+++|+||||||||||||+++|+.|+++|++.. +++|+|+||||++++++||+|+||++ |+++ |+|+|
T Consensus 1368 aIARALlr~p~ILLLDEaTSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRlsti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1368 AIARALLREPKILLLDEATSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRIASIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred HHHHHHhcCCCEEEEeCcccccCHHHHHHHHHHHHHHhccCCCEEEEEechHHHHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 99999999999999999999999999999999999874 69999999999999999999999999 9955 89999
Q ss_pred HHHHhhccCCCchHHHHHHHH
Q 047171 536 DVLMQMNNGEGGAYSKMVQLQ 556 (1224)
Q Consensus 536 ~~l~~~~~~~~~~y~~~~~~~ 556 (1224)
+||+++. +|.|+++++.|
T Consensus 1448 ~eLl~~~---~g~Y~~l~~~~ 1465 (1466)
T PTZ00265 1448 EELLSVQ---DGVYKKYVKLA 1465 (1466)
T ss_pred HHHHhcC---CChHHHHHhhc
Confidence 9999731 79999998765
No 25
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=5.9e-82 Score=787.80 Aligned_cols=568 Identities=30% Similarity=0.474 Sum_probs=497.7
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 639 LLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNF 718 (1224)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 718 (1224)
++.++++.++.++.+++.++..++..++....++++..+++........ .....+.+.++++.++..++.++..+..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 89 (582)
T PRK11176 13 FRRLWPTIAPFKAGLIVAGVALILNAASDTFMLSLLKPLLDDGFGKADR---SVLKWMPLVVIGLMILRGITSFISSYCI 89 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCch---hHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555555555555555555555555566677777777655432111 1111223334456677788888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 719 AIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRV 798 (1224)
Q Consensus 719 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 798 (1224)
.+.+.++...+|.++++++++.|.++|+ +...|++++|+++|++.+...+...+..++..++.+++.++++++++|.+
T Consensus 90 ~~~~~~~~~~lr~~~~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 167 (582)
T PRK11176 90 SWVSGKVVMTMRRRLFGHMMGMPVSFFD--KQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQL 167 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998 67899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 047171 799 AIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWF 878 (1224)
Q Consensus 799 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1224)
++++++++|+.+++.+...+..++..++.++..++....+.|.++|+++||+|+.++.+.++|++..+...+...+....
T Consensus 168 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (582)
T PRK11176 168 SLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSA 247 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888888777777778878888888889999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 047171 879 SGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSE 958 (1224)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 958 (1224)
......+..++..+..++++++|++++..|.+++|++++++.+......|+..+...+..+..+..+.+|+.++++.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 327 (582)
T PRK11176 248 SSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQE 327 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 88888888888888888889999999999999999999888888888899999999999999999999999999876544
Q ss_pred CCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEE
Q 047171 959 IDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVM 1038 (1224)
Q Consensus 959 ~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~ 1038 (1224)
.+... . ..++..+.|+++||+|+|+++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 328 ~~~~~-~----~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~ 401 (582)
T PRK11176 328 KDEGK-R----VIERAKGDIEFRNVTFTYPGK-EVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEIL 401 (582)
T ss_pred CCCCC-c----CCCCCCCeEEEEEEEEecCCC-CCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEE
Confidence 22111 0 112234579999999999753 45799999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCC-CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCC
Q 047171 1039 VDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEV-ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQL 1117 (1224)
Q Consensus 1039 idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~-~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~L 1117 (1224)
+||+|+++++.+++|++|+||||||++|++||||||.+++++ ++|++++++++.+++++++.++|+||||.+||+|.+|
T Consensus 402 i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~L 481 (582)
T PRK11176 402 LDGHDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLL 481 (582)
T ss_pred ECCEEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcC
Confidence 999999999999999999999999999999999999998654 7999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 047171 1118 SGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1118 SGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt 1197 (1224)
||||||||+||||++++|+|||||||||+||++||+.+.+.|.+..+++|+|+||||+++++.||+|++|++|+|+|+|+
T Consensus 482 SGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~ 561 (582)
T PRK11176 482 SGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGT 561 (582)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999999888999999999999999999999999999999999
Q ss_pred hhHHhhcCCCchhHHHHHHhhc
Q 047171 1198 QSSLLSMGNGGAYYSLIKMQAS 1219 (1224)
Q Consensus 1198 ~~eLl~~~~~g~y~~l~~~q~~ 1219 (1224)
|++|+++ ++.|++|++.|.+
T Consensus 562 ~~~l~~~--~~~y~~l~~~~~~ 581 (582)
T PRK11176 562 HAELLAQ--NGVYAQLHKMQFG 581 (582)
T ss_pred HHHHHhC--CChHHHHHHHHhc
Confidence 9999987 7999999987754
No 26
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=2.7e-82 Score=801.31 Aligned_cols=536 Identities=36% Similarity=0.509 Sum_probs=475.7
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC-ChHHHHHHH----H----H---HHHHHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTS-DISISIEAV----D----K---VPEKGMCWTR 71 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~----~----~---~~~~~~~~~~ 71 (1224)
+++++++.++.+ ..+++++++.++.+++....|+++++++|.+... +...+...+ . . .+++.+++.+
T Consensus 149 ~~~l~~~~~~~~-~~l~~~~~~~~~~~l~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 227 (711)
T TIGR00958 149 LFRLLGLSGRDW-PWLISAFVFLTLSSLGEMFIPFYTGRVIDTLGGDKGPPALASAIFFMCLLSIASSVSAGLRGGSFNY 227 (711)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888887654 3556777777888888888899999999987532 222221110 0 0 0456677788
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047171 72 TAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRL 151 (1224)
Q Consensus 72 ~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (1224)
.+.++..++|.++|++++++|.+||++ . ++|++++|+++|++.+++.+...+..++.+++.+++.++++++++|++
T Consensus 228 ~~~~~~~~lr~~l~~~ll~~~~~~f~~---~-~~G~i~srl~~Di~~i~~~~~~~~~~~l~~~~~~i~~~~~l~~~s~~l 303 (711)
T TIGR00958 228 TMARINLRIREDLFRSLLRQDLGFFDE---N-KTGELTSRLSSDTQTMSRSLSLNVNVLLRNLVMLLGLLGFMLWLSPRL 303 (711)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHcC---C-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 999999999999999999999999998 5 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 152 ALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLT 231 (1224)
Q Consensus 152 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 231 (1224)
++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+...+....
T Consensus 304 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~Ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 383 (711)
T TIGR00958 304 TMVTLINLPLVFLAEKVFGKRYQLLSEELQEAVAKANQVAEEALSGMRTVRSFAAEEGEASRFKEALEETLQLNKRKALA 383 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998888887776
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047171 232 KGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV 310 (1224)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 310 (1224)
.+...... .+..+..++++++|++++.+|.+++|.+++++.|......|+..+...+..++++.++.+|++++++.+++
T Consensus 384 ~~~~~~~~~~~~~~~~~~il~~g~~lv~~g~it~G~lva~~~~~~~l~~~l~~l~~~~~~~~~~~~a~~ri~~~l~~~~~ 463 (711)
T TIGR00958 384 YAGYLWTTSVLGMLIQVLVLYYGGQLVLTGKVSSGNLVSFLLYQEQLGEAVRVLSYVYSGMMQAVGASEKVFEYLDRKPN 463 (711)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 66655544 55556667788899999999999999999999999999999999999999999999999999999987765
Q ss_pred CCCCcccccccccccccEEEEeEEEECCCCC-------------CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEEC
Q 047171 311 INSEDEIGKTLAYLRGEIEFKDVDFSYPTRP-------------DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLD 377 (1224)
Q Consensus 311 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~-------------~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~ 377 (1224)
.+... ...+.+..+.|+|+||+|+||+++ +|+++|||||||||||||+++|+|+|+|++|+|++|
T Consensus 464 ~~~~~--~~~~~~~~~~I~~~nVsf~Y~~~~~~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~~G~I~id 541 (711)
T TIGR00958 464 IPLTG--TLAPLNLEGLIEFQDVSFSYPNRPDVPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPTGGQVLLD 541 (711)
T ss_pred CCCCC--CCCCCCCCCeEEEEEEEEECCCCCCCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEEC
Confidence 43221 112223457899999999998532 567999999999999999999999999999999999
Q ss_pred CEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChH
Q 047171 378 GHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGG 457 (1224)
Q Consensus 378 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 457 (1224)
|+|+++++.+++|++|+||+|||++|++||+|||++|.+++++++++++++.++++++++++|+|+||.+||+|.+||||
T Consensus 542 g~~i~~~~~~~lr~~i~~v~Q~~~lF~gTIreNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGG 621 (711)
T TIGR00958 542 GVPLVQYDHHYLHRQVALVGQEPVLFSGSVRENIAYGLTDTPDEEIMAAAKAANAHDFIMEFPNGYDTEVGEKGSQLSGG 621 (711)
T ss_pred CEEHHhcCHHHHHhhceEEecCccccccCHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCCCccCCcccCCCCcCCHH
Confidence 99999999999999999999999999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHH
Q 047171 458 QKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDV 537 (1224)
Q Consensus 458 q~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~ 537 (1224)
||||||||||++++|+|||||||||+||+++|+.+++ ....+++|+|+||||+++++.||+|+||++|+|+|+|+|+|
T Consensus 622 QkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~--~~~~~~~TvIiItHrl~~i~~aD~IivL~~G~ive~Gt~~e 699 (711)
T TIGR00958 622 QKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE--SRSRASRTVLLIAHRLSTVERADQILVLKKGSVVEMGTHKQ 699 (711)
T ss_pred HHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH--hhccCCCeEEEEeccHHHHHhCCEEEEEECCEEEEeeCHHH
Confidence 9999999999999999999999999999999999998 33457899999999999999999999999999999999999
Q ss_pred HHhhccCCCchHHHH
Q 047171 538 LMQMNNGEGGAYSKM 552 (1224)
Q Consensus 538 l~~~~~~~~~~y~~~ 552 (1224)
|+++ ++.|+++
T Consensus 700 L~~~----~~~y~~l 710 (711)
T TIGR00958 700 LMED----QGCYKHL 710 (711)
T ss_pred HHhC----CCchHhc
Confidence 9987 7788765
No 27
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=5.7e-82 Score=800.93 Aligned_cols=553 Identities=24% Similarity=0.359 Sum_probs=491.1
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 641 RLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAI 720 (1224)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 720 (1224)
+++++.++.++.+...++++++..++....|+++..+++........ .....+.++++++.++..++.+++.++..+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 137 WFWSTLKESWPLYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAF---ETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcH---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444555666666666777777777778888888888765432111 112223344455566678889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 721 MGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAI 800 (1224)
Q Consensus 721 ~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 800 (1224)
.+.++..++|.+++++++++|+.| + +.++|++++|+ +|++.+++.+...+...+..++.+++.++++++++|.+++
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~--~~~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l 289 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-R--PASVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPLVW 289 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-C--CCChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999997 5 56899999999 8999999998888777777777777778888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 047171 801 VMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSG 880 (1224)
Q Consensus 801 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1224)
+.++.+|+.+++.+...+..++..++..+..++..+.+.|+++|+++||+|+.|+.+.++|.+..++..+...+......
T Consensus 290 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (694)
T TIGR03375 290 VPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFLSN 369 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888888999999999999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 047171 881 IGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEID 960 (1224)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 960 (1224)
....+..++..++.++++++|++++..|.+|+|.++++..+......|+..+...+.++..+..+.+|+.++++.+++.+
T Consensus 370 ~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e~~ 449 (694)
T TIGR03375 370 LATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVERP 449 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 88888888888889999999999999999999999999999999999999999999999999999999999998765432
Q ss_pred CCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEEC
Q 047171 961 PEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVD 1040 (1224)
Q Consensus 961 ~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id 1040 (1224)
.... .. ..++..+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|.+|
T Consensus 450 ~~~~-~~--~~~~~~~~I~~~~vsf~Y~~~-~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 525 (694)
T TIGR03375 450 EGTR-FL--HRPRLQGEIEFRNVSFAYPGQ-ETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLD 525 (694)
T ss_pred CCCC-CC--CCCCccceEEEEEEEEEeCCC-CccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEEC
Confidence 2111 00 112235689999999999743 4579999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1041 ERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1041 G~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
|+|+++++++++|++|+||||||++|+|||+|||.+++++++++++++|++.++++++|.++|+||||.+||+|.+||||
T Consensus 526 g~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgG 605 (694)
T TIGR03375 526 GVDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGG 605 (694)
T ss_pred CEEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHH
Confidence 99999999999999999999999999999999999998889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhH
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSS 1200 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~e 1200 (1224)
|||||+||||++++|+|||||||||+||++||+.|++.|++..+++|+|+||||+++++.||+|+||++|+|+|+|+|+|
T Consensus 606 QrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~e 685 (694)
T TIGR03375 606 QRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQ 685 (694)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHH
Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred Hhhc
Q 047171 1201 LLSM 1204 (1224)
Q Consensus 1201 Ll~~ 1204 (1224)
|+++
T Consensus 686 Ll~~ 689 (694)
T TIGR03375 686 VLEA 689 (694)
T ss_pred HHHH
Confidence 9975
No 28
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=2e-81 Score=783.31 Aligned_cols=567 Identities=25% Similarity=0.342 Sum_probs=484.0
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 638 SLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYN 717 (1224)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 717 (1224)
.+++++++.++.++.+++.+++.++..++....|++++.+++.......... .....++++++++.++..++.++..+.
T Consensus 10 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (592)
T PRK10790 10 TLKRLLAYGSPWRKPLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPL-GLVAGLAAAYVGLQLLAAGLHYAQSLL 88 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcch-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555556666667777777788888888889999988886543211111 111112334555556677788888899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 718 FAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWR 797 (1224)
Q Consensus 718 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1224)
....+.+...++|.++++++++.|.+||+ +.++|++++|+++|++.+++.+...+..++..+..+++.++++++++|.
T Consensus 89 ~~~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (592)
T PRK10790 89 FNRAAVGVVQQLRTDVMDAALRQPLSAFD--TQPVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDWR 166 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999 6789999999999999999999999999999998888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHH
Q 047171 798 VAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSW 877 (1224)
Q Consensus 798 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 877 (1224)
+++++++++|+.++......+..+...++..+..++...++.|.++|+++||+|+.++.+.+++.+..+...+...+...
T Consensus 167 l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (592)
T PRK10790 167 MALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTLR 246 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888777777677777777777777788889999999999999999999999999999988888777766665
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Q 047171 878 FSGIG-LFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRK 956 (1224)
Q Consensus 878 ~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~ 956 (1224)
..+.. ..+..++..+...+++++++. +..|.++++.++++..+......|+..+...+..+..+..+.+|+.++++.+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~~ 325 (592)
T PRK10790 247 LDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDGP 325 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 55433 333334333333333333333 5789999999999999998999999999999999999999999999999765
Q ss_pred CCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCce
Q 047171 957 SEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGS 1036 (1224)
Q Consensus 957 ~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~ 1036 (1224)
++.... . ..+...+.|+|+||+|+|++ ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+
T Consensus 326 ~~~~~~--~----~~~~~~~~i~~~~v~f~y~~--~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~ 397 (592)
T PRK10790 326 RQQYGN--D----DRPLQSGRIDIDNVSFAYRD--DNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGE 397 (592)
T ss_pred CccCCC--C----ccCCCCCeEEEEEEEEEeCC--CCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCce
Confidence 432111 0 11123467999999999974 356999999999999999999999999999999999999999999
Q ss_pred EEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCC
Q 047171 1037 VMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQ 1116 (1224)
Q Consensus 1037 I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~ 1116 (1224)
|.+||.|+++++++.+|++|+||||||++|+|||||||.+++ +++|++++++++.+++++++.++|+||||.+||+|.+
T Consensus 398 I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~ 476 (592)
T PRK10790 398 IRLDGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNN 476 (592)
T ss_pred EEECCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCC
Confidence 999999999999999999999999999999999999999997 6899999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 047171 1117 LSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1117 LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~G 1196 (1224)
|||||||||+||||++++|+|||||||||+||++|++.|.+.|++..++||+|+||||+++++.||+|++|++|+++|.|
T Consensus 477 LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G 556 (592)
T PRK10790 477 LSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQG 556 (592)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEc
Confidence 99999999999999999999999999999999999999999999988899999999999999999999999999999999
Q ss_pred ChhHHhhcCCCchhHHHHHHhhc
Q 047171 1197 TQSSLLSMGNGGAYYSLIKMQAS 1219 (1224)
Q Consensus 1197 t~~eLl~~~~~g~y~~l~~~q~~ 1219 (1224)
||+||+++ ++.|++|++.|..
T Consensus 557 ~~~~L~~~--~~~y~~l~~~~~~ 577 (592)
T PRK10790 557 THQQLLAA--QGRYWQMYQLQLA 577 (592)
T ss_pred CHHHHHhC--CCHHHHHHHHHhh
Confidence 99999986 7999999998754
No 29
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-85 Score=716.08 Aligned_cols=503 Identities=28% Similarity=0.409 Sum_probs=434.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 707 TLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASL 786 (1224)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~ 786 (1224)
+.+++-+++|++..+.+...+++-.++|+|+..+++.|.- ...+|+++.-+.+..+.+. ++...+..+...++-+..
T Consensus 272 sG~~~nlRtfLWi~VqQyttR~ie~~lfrHlh~LSlrwHL--~rrtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~v 348 (790)
T KOG0056|consen 272 SGFLNNLRTFLWIPVQQYTTREIETELFRHLHNLSLRWHL--NRRTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGV 348 (790)
T ss_pred ccchhhhheeEEEEhhHhHHHHHHHHHHHHHHhhceeeee--cccccceeehhccCcchhh-HHHHHHhhcccHHHHhhh
Confidence 4667777888888899999999999999999999999998 4568998888877777666 555555555555555555
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHh
Q 047171 787 AYTLS-LLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETM 865 (1224)
Q Consensus 787 ~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~ 865 (1224)
+++.. ..++|+.+++++++..+.+...........+.++++..+..+......+++-+..|||-|++|++..++|.+..
T Consensus 349 a~vYF~~~Fn~wFgLIVfl~m~lY~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAi 428 (790)
T KOG0056|consen 349 AMVYFFIKFNIWFGLIVFLMMLLYCYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAI 428 (790)
T ss_pred hhhhhhhhHhHHHHHHHHHHHHHHhheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHH
Confidence 54443 34688888887777666655444333344455666666777778888999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 866 KGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSA 945 (1224)
Q Consensus 866 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 945 (1224)
..+++..++...--.+.......+..++.+..-.+.++++-.+..+.|+++.+..+++...+|+..+...+..+++...-
T Consensus 429 l~Yqk~E~ks~~sLnfLN~~Qn~Ii~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiD 508 (790)
T KOG0056|consen 429 LKYQKQEWKSLASLNFLNIVQNGIIGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFID 508 (790)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhh
Confidence 99998877766555555555555555555555555667777899999999999999999999999999999999999999
Q ss_pred HHHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHH
Q 047171 946 IRTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGL 1025 (1224)
Q Consensus 946 ~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~l 1025 (1224)
++++++++++++|+.+.+ .. ++....+|.|+|+||+|.|+ |++|||+||||+++||+++|+|||||+||||++++
T Consensus 509 mEnmfdllkee~eVvd~P-~a--~pl~~~~G~i~fsnvtF~Y~--p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRl 583 (790)
T KOG0056|consen 509 MENMFDLLKEEPEVVDLP-GA--PPLKVTQGKIEFSNVTFAYD--PGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRL 583 (790)
T ss_pred HHHHHHHhhcCchhhcCC-CC--CCccccCCeEEEEEeEEecC--CCCceeecceEEecCCcEEEEECCCCCchhHHHHH
Confidence 999999998877654321 11 12233578999999999996 56789999999999999999999999999999999
Q ss_pred HhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccc
Q 047171 1026 IERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDG 1105 (1224)
Q Consensus 1026 L~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~g 1105 (1224)
|+||||.++|+|.|||+||+++..++||++||+||||..||++||.+||.|++|.+++||+.+|++.|++||-|.++|+|
T Consensus 584 LfRffdv~sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPeg 663 (790)
T KOG0056|consen 584 LFRFFDVNSGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEG 663 (790)
T ss_pred HHHHhhccCceEEEcCchHHHHHHHHHHHhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEE
Q 047171 1106 YDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIV 1185 (1224)
Q Consensus 1106 ldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~ 1185 (1224)
|+|.|||+|..||||||||+||||+++++|.|++|||||||||..||+.||.+|.++++++|.|+|||||+|+.+||.|+
T Consensus 664 Y~t~VGERGLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~IL 743 (790)
T KOG0056|consen 664 YNTRVGERGLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLIL 743 (790)
T ss_pred hhhhhhhcccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCEEEEecChhHHhhcCCCchhHHHHHHhh
Q 047171 1186 VIKNGKVVEQGTQSSLLSMGNGGAYYSLIKMQA 1218 (1224)
Q Consensus 1186 vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~ 1218 (1224)
|+++|+|+|.|+|+||+++ .+|.|++||+.|+
T Consensus 744 vi~~G~IvErG~HeeLl~r-dgG~Ya~MWq~qq 775 (790)
T KOG0056|consen 744 VISNGRIVERGRHEELLKR-DGGAYADMWQAQQ 775 (790)
T ss_pred EEeCCeEeecCcHHHHHhc-cCCcHHHHHHHHH
Confidence 9999999999999999997 5899999997654
No 30
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2e-81 Score=776.48 Aligned_cols=541 Identities=23% Similarity=0.324 Sum_probs=472.8
Q ss_pred CcchHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-CCC-----hHHHHHH--H-H----HH---HH
Q 047171 1 MGTKGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELG-TSD-----ISISIEA--V-D----KV---PE 64 (1224)
Q Consensus 1 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~-~~~-----~~~~~~~--~-~----~~---~~ 64 (1224)
|+.++++++|.+++++ .++++++++++..++....|++++.+||... ... ....+.. + . .. ++
T Consensus 1 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (574)
T PRK11160 1 MRALLPFLKLYKRHWF-MLSLGILLAIVTLLASIGLLTLSGWFLSASAVAGLAGLYSFNYMLPAAGVRGAAIGRTAGRYG 79 (574)
T ss_pred CchhHHHHHHHhhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccchhhHHHHhHHHHHHHHHHHHHHHHHH
Confidence 4446678888877654 4567777777777777888899999999643 221 1111000 0 0 00 56
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 047171 65 KGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVA 144 (1224)
Q Consensus 65 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (1224)
..++.++.+.++..++|.++|+|++++|.++|++ . ++|++++|+++|++.+++++.+.++.++.++++++++++++
T Consensus 80 ~~~~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~~---~-~~g~~~srl~~Dv~~l~~~~~~~~~~~~~~~~~~~~~~~~l 155 (574)
T PRK11160 80 ERLVSHDATFRVLTHLRVFTFSKLLPLSPAGLAR---Y-RQGDLLNRLVADVDTLDHLYLRLISPLVAALVVILVLTIGL 155 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccChHhhcc---C-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777888999999999999999999999999998 5 99999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHH
Q 047171 145 FLLSWRLALAALPFSLLFIV-PGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNME 223 (1224)
Q Consensus 145 ~~~~~~l~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~ 223 (1224)
+++||++++++++++|++++ +..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+
T Consensus 156 ~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~ 235 (574)
T PRK11160 156 SFFDLTLALTLGGILLLLLLLLPLLFYRLGKKPGQDLTHLRAQYRVQLTEWLQGQAELTLFGAEDRYRQQLEQTEQQWLA 235 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHCCHHHHHHcCChHHHHHHHHHHHHHHHH
Confidence 99999999998888887655 45677888888999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 224 LGIKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILG-GVGIMSALPNLSFISQATTAATRI 301 (1224)
Q Consensus 224 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~s~~ri 301 (1224)
...+..+..+...++. ++..++.++++++|+++ .+|.+++|.+++++.+.... ..|+..+...+..++++.++++|+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~~~-~~g~~t~g~l~a~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ri 314 (574)
T PRK11160 236 AQRRQANLTGLSQALMILANGLTVVLMLWLAAGG-VGGNAQPGALIALFVFAALAAFEALMPVAGAFQHLGQVIASARRI 314 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888777766 66666777788999988 47899999999987776443 457777777888999999999999
Q ss_pred HHHhccCCCCCCCcccccccccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 047171 302 FEMIDRVPVINSEDEIGKTLAYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDP 369 (1224)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~ 369 (1224)
.++++.+++.+.+.. .......+.|+|+||+|+|++. ++++++|||||||||||||+++|+|+|+|
T Consensus 315 ~~ll~~~~~~~~~~~--~~~~~~~~~i~~~~v~f~y~~~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p 392 (574)
T PRK11160 315 NEITEQKPEVTFPTT--STAAADQVSLTLNNVSFTYPDQPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDP 392 (574)
T ss_pred HHHHhCCCCCCCCcc--cCCCCCCCeEEEEEEEEECCCCCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC
Confidence 999987765332211 1112234679999999999752 25679999999999999999999999999
Q ss_pred CCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccC
Q 047171 370 VKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQ 449 (1224)
Q Consensus 370 ~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~ 449 (1224)
++|+|++||+|+++++.+++|++|+||+|||++|++||+|||++++|++++++++++++.+++++++++ |+||||.+||
T Consensus 393 ~~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~al~~~~l~~~i~~-p~GldT~vge 471 (574)
T PRK11160 393 QQGEILLNGQPIADYSEAALRQAISVVSQRVHLFSATLRDNLLLAAPNASDEALIEVLQQVGLEKLLED-DKGLNAWLGE 471 (574)
T ss_pred CCceEEECCEEhhhCCHHHHHhheeEEcccchhhcccHHHHhhcCCCccCHHHHHHHHHHcCCHHHHcC-ccccCchhcC
Confidence 999999999999999999999999999999999999999999999998999999999999999999999 9999999999
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceE
Q 047171 450 FGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRV 529 (1224)
Q Consensus 450 ~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i 529 (1224)
+|.+|||||||||+||||++++|+|||||||||+||+++|+.+++.+.+..+++|+|+||||+++++.||+|++|++|++
T Consensus 472 ~g~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~~~~tviiitHr~~~~~~~d~i~~l~~G~i 551 (574)
T PRK11160 472 GGRQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHAQNKTVLMITHRLTGLEQFDRICVMDNGQI 551 (574)
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecChhHHHhCCEEEEEeCCeE
Confidence 99999999999999999999999999999999999999999999999998889999999999999999999999999999
Q ss_pred EeecChHHHHhhccCCCchHHHHHH
Q 047171 530 IESGSHDVLMQMNNGEGGAYSKMVQ 554 (1224)
Q Consensus 530 ~~~g~~~~l~~~~~~~~~~y~~~~~ 554 (1224)
++.|+|+||+++ +|.|+++|+
T Consensus 552 ~~~g~~~~l~~~----~g~y~~l~~ 572 (574)
T PRK11160 552 IEQGTHQELLAQ----QGRYYQLKQ 572 (574)
T ss_pred EEeCCHHHHHhc----CcHHHHHHh
Confidence 999999999998 899999886
No 31
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=4.9e-81 Score=791.37 Aligned_cols=537 Identities=27% Similarity=0.340 Sum_probs=474.6
Q ss_pred hHHHHhh-ccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC-ChHHHHHHHH--------H---HHHHHHHHH
Q 047171 4 KGGLFRY-ADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTS-DISISIEAVD--------K---VPEKGMCWT 70 (1224)
Q Consensus 4 ~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~~--------~---~~~~~~~~~ 70 (1224)
+++++++ .++++ ..++..++++++..++....|++++.++|.+... +...++..+. . .+++.++..
T Consensus 123 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (686)
T TIGR03797 123 LRDLLRFALRGAR-RDLLAILAMGLLGTLLGMLVPIATGILIGTAIPDADRSLLVQIALALLAAAVGAAAFQLAQSLAVL 201 (686)
T ss_pred HHHHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556665 34443 3445666677777777777888999999987533 2222211100 0 055677778
Q ss_pred HHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHH
Q 047171 71 RTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWR 150 (1224)
Q Consensus 71 ~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (1224)
+.+.++..++|.++|+|++++|++||++ . ++|++++|++ |++.+++++...+...+.++..+++.++++++++|.
T Consensus 202 ~~~~~~~~~l~~~~~~~ll~~~~~~~~~---~-~~g~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 276 (686)
T TIGR03797 202 RLETRMDASLQAAVWDRLLRLPVSFFRQ---Y-STGDLASRAM-GISQIRRILSGSTLTTLLSGIFALLNLGLMFYYSWK 276 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHCC---C-ChhHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999998 5 9999999997 899999999998888888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 151 LALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGL 230 (1224)
Q Consensus 151 l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 230 (1224)
+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+
T Consensus 277 l~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 356 (686)
T TIGR03797 277 LALVAVALALVAIAVTLVLGLLQVRKERRLLELSGKISGLTVQLINGISKLRVAGAENRAFARWAKLFSRQRKLELSAQR 356 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC
Q 047171 231 TKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVP 309 (1224)
Q Consensus 231 ~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~ 309 (1224)
...+...+. ++..+..++++++|++++.+|.+|+|.++++..+......|+..+...+..++++..+.+|+.++++.++
T Consensus 357 ~~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~ltiG~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~ 436 (686)
T TIGR03797 357 IENLLTVFNAVLPVLTSAALFAAAISLLGGAGLSLGSFLAFNTAFGSFSGAVTQLSNTLISILAVIPLWERAKPILEALP 436 (686)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 887776666 6666777888999999999999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCcccccccccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEEC
Q 047171 310 VINSEDEIGKTLAYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLD 377 (1224)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~ 377 (1224)
+.+... .......+.|+|+||+|+|++. ++|+++||||+||||||||+++|+|+|+|++|+|++|
T Consensus 437 e~~~~~---~~~~~~~~~I~~~nvsf~Y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~I~id 513 (686)
T TIGR03797 437 EVDEAK---TDPGKLSGAIEVDRVTFRYRPDGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPESGSVFYD 513 (686)
T ss_pred ccccCc---CCCCCCCceEEEEEEEEEcCCCCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEEC
Confidence 432211 1122335689999999999632 2577999999999999999999999999999999999
Q ss_pred CEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChH
Q 047171 378 GHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGG 457 (1224)
Q Consensus 378 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 457 (1224)
|+|+++++.+++|++||||+|||++|++||+|||++|+| +++++++++++.++++++++++|+||||.+||+|.+||||
T Consensus 514 g~~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~~~~~-~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~G~~LSGG 592 (686)
T TIGR03797 514 GQDLAGLDVQAVRRQLGVVLQNGRLMSGSIFENIAGGAP-LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEGGGTLSGG 592 (686)
T ss_pred CEEcCcCCHHHHHhccEEEccCCccCcccHHHHHhcCCC-CCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCHH
Confidence 999999999999999999999999999999999999998 8999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHH
Q 047171 458 QKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDV 537 (1224)
Q Consensus 458 q~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~ 537 (1224)
|||||+||||++++|+|||||||||+||+++|+.+.+.+++. ++|+|+||||+++++.||+|+||++|+|++.|+|+|
T Consensus 593 QrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~--~~T~IiItHr~~~i~~~D~Iivl~~G~iv~~G~~~~ 670 (686)
T TIGR03797 593 QRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL--KVTRIVIAHRLSTIRNADRIYVLDAGRVVQQGTYDE 670 (686)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh--CCeEEEEecChHHHHcCCEEEEEECCEEEEECCHHH
Confidence 999999999999999999999999999999999999999876 689999999999999999999999999999999999
Q ss_pred HHhhccCCCchHHHHHHHH
Q 047171 538 LMQMNNGEGGAYSKMVQLQ 556 (1224)
Q Consensus 538 l~~~~~~~~~~y~~~~~~~ 556 (1224)
|+++ ++.|+++++.|
T Consensus 671 Ll~~----~~~y~~l~~~q 685 (686)
T TIGR03797 671 LMAR----EGLFAQLARRQ 685 (686)
T ss_pred HHhC----CcHHHHHHHhc
Confidence 9987 88999998754
No 32
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=9.4e-81 Score=788.93 Aligned_cols=567 Identities=25% Similarity=0.382 Sum_probs=501.6
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 639 LLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNF 718 (1224)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 718 (1224)
++++++..++.++.+...++++++..++..+.|+++..+++....... ......+++.++++.++..++.+++.+..
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~---~~~l~~l~~~~~~~~~~~~~~~~l~~~~~ 203 (694)
T TIGR01846 127 FSWFIPAIIRYRKQFREVLLISLALQLFALVTPLLFQVVIDKVLVHRG---LSTLSVLALAMLAVAIFEPALGGLRTYLF 203 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC---hhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444455555566666666666677777788888888886653211 11223344555666777888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 719 AIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRV 798 (1224)
Q Consensus 719 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 798 (1224)
...+.++..++|.+++++++++|++||+ +.++|++++|+ +|++.+++++...+...+..++..++.++++++++|.+
T Consensus 204 ~~~~~~~~~~l~~~~~~~l~~l~~~~f~--~~~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 280 (694)
T TIGR01846 204 AHLTSRIDVELGARLYRHLLGLPLGYFE--SRRVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTL 280 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHcC--CCCHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999 77899999999 79999999988877777767776666788889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 047171 799 AIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWF 878 (1224)
Q Consensus 799 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1224)
++++++++|+.+++.+...+..++..++..+..++..+.+.|+++|+++||+++.|+.+.++|.+..++..+...+..+.
T Consensus 281 ~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 360 (694)
T TIGR01846 281 TGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNL 360 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888877777777777777788888999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 047171 879 SGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSE 958 (1224)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 958 (1224)
......+..++..+..++++|+|++++..|.+|+|.++++..+......|+..+...+..+..+..+.+|+.++++.+++
T Consensus 361 ~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 440 (694)
T TIGR01846 361 GNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTE 440 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88888888888888999999999999999999999999999999999999999999999999999999999999987655
Q ss_pred CCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEE
Q 047171 959 IDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVM 1038 (1224)
Q Consensus 959 ~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~ 1038 (1224)
...... . ..+...+.|+|+||+|+|++. ++++|+|+||+|+|||++||||+||||||||+++|+|+|+|++|+|+
T Consensus 441 ~~~~~~--~--~~~~~~~~i~~~~vsf~y~~~-~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~ 515 (694)
T TIGR01846 441 PRSAGL--A--ALPELRGAITFENIRFRYAPD-SPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVL 515 (694)
T ss_pred ccCCCC--C--CCCCCCCeEEEEEEEEEcCCC-CccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEE
Confidence 322110 0 112234689999999999743 35699999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCC
Q 047171 1039 VDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLS 1118 (1224)
Q Consensus 1039 idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1118 (1224)
+||+|+++++.+++|++++||||||++|++||+|||.++++++++++++++++.+++++++.++|+||||.+|++|.+||
T Consensus 516 idg~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LS 595 (694)
T TIGR01846 516 VDGVDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLS 595 (694)
T ss_pred ECCEehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCC
Confidence 99999999999999999999999999999999999999988899999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 047171 1119 GGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQ 1198 (1224)
Q Consensus 1119 GGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~ 1198 (1224)
|||||||+||||++++|+|||||||||+||+++|+.+.+.|++..+++|+|+||||+++++.||+|++|++|+|+|+|+|
T Consensus 596 gGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~ 675 (694)
T TIGR01846 596 GGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRH 675 (694)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHHHhh
Q 047171 1199 SSLLSMGNGGAYYSLIKMQA 1218 (1224)
Q Consensus 1199 ~eLl~~~~~g~y~~l~~~q~ 1218 (1224)
+||+++ +|.|++|++.|.
T Consensus 676 ~~l~~~--~~~y~~l~~~~~ 693 (694)
T TIGR01846 676 EELLAL--QGLYARLWQQQS 693 (694)
T ss_pred HHHHHc--CChHHHHHHhhc
Confidence 999986 799999998764
No 33
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.7e-81 Score=703.11 Aligned_cols=505 Identities=24% Similarity=0.356 Sum_probs=444.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Q 047171 701 LGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQV 780 (1224)
Q Consensus 701 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~ 780 (1224)
=++++...+..++.......+..++...+|.++|+++...+..-.. .-.+|+++||+..|++.+++.+-..+.+++..
T Consensus 65 R~~aI~Rt~~RY~ERlvsH~AtfrvL~~lRv~~f~kl~p~sp~~~~--r~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a 142 (573)
T COG4987 65 RGLAILRTAARYVERLVSHDATFRVLSALRVRLFEKLEPLSPALLL--RYRSGDLLNRLVADVDALDNLYLRVIAPAVVA 142 (573)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhccCChHHHH--hcChHhHHHHHHhhHHHHhhHHHHHHhhHHHH
Confidence 3567778888888888889999999999999999999988777666 55699999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHH
Q 047171 781 FFSASLAYTLSLLVTWRVAIVMIAVQ-PLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILD 859 (1224)
Q Consensus 781 ~~~~~~~~~~~~~~~~~l~lv~l~~~-pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~ 859 (1224)
++.+.+..+...+++|.+++.+...+ .+.+++.+...++.++..++.+...+...+++.|.+.|....+.||+++.+.+
T Consensus 143 ~~~~~~~~i~L~f~~~~~Alll~~~ll~~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~ 222 (573)
T COG4987 143 LVLIAVVTIGLSFFSIPLALLLGLILLLLLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRT 222 (573)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHH
Confidence 88877777777777887776554443 44455566777777888888888999999999999999999999999999999
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 047171 860 LFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAG-SMTSD 938 (1224)
Q Consensus 860 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 938 (1224)
.+.+..+.+.+...+...+.++..++..++..+..+..+.+.+-....|..+......+.+.++....++..+. ..+.+
T Consensus 223 ~l~~~e~~~~~~q~k~~~~~~~~~a~~~l~~g~~v~~~l~w~a~~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~ 302 (573)
T COG4987 223 ALEATEASWLKAQRKQARFTGLSDAILLLIAGLLVIGLLLWMAAQVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQH 302 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHH
Confidence 99999999999999999999999999998888887744444444455666664444444454455555555555 66788
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCC
Q 047171 939 IAKGSSAIRTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSG 1018 (1224)
Q Consensus 939 ~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsG 1018 (1224)
..+...+++|+.++.+.+++...+.++ .+.+. ..++++||+|+||++ ++++|+|+||++++||||||+||||||
T Consensus 303 lgq~~~Sa~Rl~~i~~q~~e~~~~~~~----~~~~~-~~l~~~~vsF~y~~~-~~~~L~~~~l~l~~GEkvAIlG~SGsG 376 (573)
T COG4987 303 LGQVIASARRLNDILDQKPEVTFPDEQ----TATTG-QALELRNVSFTYPGQ-QTKALKNFNLTLAQGEKVAILGRSGSG 376 (573)
T ss_pred hhHHHHHHHHHhhhccCCcccCCCccc----cCCcc-ceeeeccceeecCCC-ccchhhccceeecCCCeEEEECCCCCC
Confidence 999999999999999887765443111 11111 279999999999865 567999999999999999999999999
Q ss_pred hHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHH
Q 047171 1019 KSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEF 1098 (1224)
Q Consensus 1019 KSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~ 1098 (1224)
|||++++|.|.|+|++|+|..+|.+++.++.+.+|+.|++++|.+++|++|+|+||.+++|++||||+|+++++++++++
T Consensus 377 KSTllqLl~~~~~~~~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l 456 (573)
T COG4987 377 KSTLLQLLAGAWDPQQGSITLNGVEIASLDEQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKL 456 (573)
T ss_pred HHHHHHHHHhccCCCCCeeeECCcChhhCChhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhh
Q 047171 1099 ISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTI 1178 (1224)
Q Consensus 1099 I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti 1178 (1224)
+++.|+||+|++||+|.+|||||||||+|||+||+|++++||||||.+||++||+.|.+.|.+..+|||+|+||||+..+
T Consensus 457 ~~~~p~gl~t~lge~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~l 536 (573)
T COG4987 457 LESAPDGLNTWLGEGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGL 536 (573)
T ss_pred HHhChhhhhchhccCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHH
Q 047171 1179 QKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIK 1215 (1224)
Q Consensus 1179 ~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~ 1215 (1224)
++||||+||++|+++|+|+|++|+++ +|.|++|++
T Consensus 537 e~~drIivl~~Gkiie~G~~~~Ll~~--~g~~~~l~q 571 (573)
T COG4987 537 ERMDRIIVLDNGKIIEEGTHAELLAN--NGRYKRLYQ 571 (573)
T ss_pred hhcCEEEEEECCeeeecCCHHhhhcc--ccHHHHHhc
Confidence 99999999999999999999999996 899999985
No 34
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.8e-81 Score=792.81 Aligned_cols=539 Identities=26% Similarity=0.334 Sum_probs=475.3
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCC-hHHHHHH----HHH-------HHHHHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSD-ISISIEA----VDK-------VPEKGMCWTR 71 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~~----~~~-------~~~~~~~~~~ 71 (1224)
+++++++.+++++ .++..++++++..++....|++++.++|.+.... ...+... +.. .+++.++..+
T Consensus 144 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iiD~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (708)
T TIGR01193 144 LLKFIPLITRQKK-LIVNIVIAAIIVTLISIAGSYYLQKIIDTYIPHKMMGTLGIISIGLIIAYIIQQILSYIQIFLLNV 222 (708)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777766544 3455666666777777778899999999875432 2111110 000 0556677888
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047171 72 TAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRL 151 (1224)
Q Consensus 72 ~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (1224)
.+.++..++|.++|+|++++|++||++ . ++|++++|++ |++.+++++...+...+.+++++++.++++++++|++
T Consensus 223 ~~~~~~~~l~~~~~~~ll~l~~~~f~~---~-~~G~~~~r~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 297 (708)
T TIGR01193 223 LGQRLSIDIILSYIKHLFELPMSFFST---R-RTGEIVSRFT-DASSIIDALASTILSLFLDMWILVIVGLFLVRQNMLL 297 (708)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCC---C-chhHHHHHhh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 999999999999999999999999998 5 9999999998 9999999999888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 152 ALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLT 231 (1224)
Q Consensus 152 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 231 (1224)
++++++.+|+++++..++.++.++..++.++..++.++.+.|.++|+++||+||.|+.+.++|.+...+..+...+..+.
T Consensus 298 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 377 (708)
T TIGR01193 298 FLLSLLSIPVYAVIIILFKRTFNKLNHDAMQANAVLNSSIIEDLNGIETIKSLTSEAERYSKIDSEFGDYLNKSFKYQKA 377 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888888777
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047171 232 KGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV 310 (1224)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 310 (1224)
.+....+. ++..+..++++++|++++.+|.+|+|.++++..+......|+..+...+..++++..+.+|+.++++.+++
T Consensus 378 ~~~~~~~~~~~~~~~~i~il~~g~~lv~~g~ls~G~lva~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 457 (708)
T TIGR01193 378 DQGQQAIKAVTKLILNVVILWTGAYLVMRGKLTLGQLITFNALLSYFLTPLENIINLQPKLQAARVANNRLNEVYLVDSE 457 (708)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 77666555 55566677888999999999999999999999999999999999999999999999999999999987655
Q ss_pred CCCCcccccccccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCE
Q 047171 311 INSEDEIGKTLAYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGH 379 (1224)
Q Consensus 311 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~ 379 (1224)
.+... .....+...+.|+|+||+|+|++. ++|+++|||||||||||||+++|+|+|+|++|+|++||+
T Consensus 458 ~~~~~-~~~~~~~~~~~I~~~~vsf~y~~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~~G~I~idg~ 536 (708)
T TIGR01193 458 FINKK-KRTELNNLNGDIVINDVSYSYGYGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQARSGEILLNGF 536 (708)
T ss_pred ccccc-cccCCCCCCCcEEEEEEEEEcCCCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCCcEEEECCE
Confidence 33221 101122345789999999999742 256799999999999999999999999999999999999
Q ss_pred ecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcC-CCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHH
Q 047171 380 KIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIG-KPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQ 458 (1224)
Q Consensus 380 ~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g-~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 458 (1224)
|+++++.+++|++||||+|||+||++||+|||.+| .|++++++++++|+.+++++++.++|+||||.+||+|.+|||||
T Consensus 537 ~i~~~~~~~lr~~i~~v~Q~~~lf~gTI~eNi~l~~~~~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~G~~LSgGQ 616 (708)
T TIGR01193 537 SLKDIDRHTLRQFINYLPQEPYIFSGSILENLLLGAKENVSQDEIWAACEIAEIKDDIENMPLGYQTELSEEGSSISGGQ 616 (708)
T ss_pred EHHHcCHHHHHHheEEEecCceehhHHHHHHHhccCCCCCCHHHHHHHHHHhCCHHHHHhcccccCcEecCCCCCCCHHH
Confidence 99999999999999999999999999999999999 57889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHH
Q 047171 459 KQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVL 538 (1224)
Q Consensus 459 ~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l 538 (1224)
||||+||||++++|+|||||||||+||+++|+.+.+.|.+. +++|+|+||||+++++.||+|++|++|++++.|+|+||
T Consensus 617 rQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~-~~~T~IiitHr~~~~~~~D~i~~l~~G~i~~~G~~~~L 695 (708)
T TIGR01193 617 KQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL-QDKTIIFVAHRLSVAKQSDKIIVLDHGKIIEQGSHDEL 695 (708)
T ss_pred HHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh-cCCEEEEEecchHHHHcCCEEEEEECCEEEEECCHHHH
Confidence 99999999999999999999999999999999999999875 68999999999999999999999999999999999999
Q ss_pred HhhccCCCchHHHHHH
Q 047171 539 MQMNNGEGGAYSKMVQ 554 (1224)
Q Consensus 539 ~~~~~~~~~~y~~~~~ 554 (1224)
+++ ++.|+++++
T Consensus 696 ~~~----~~~y~~l~~ 707 (708)
T TIGR01193 696 LDR----NGFYASLIH 707 (708)
T ss_pred Hhc----CCcHHHHhh
Confidence 987 788988874
No 35
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.5e-81 Score=706.04 Aligned_cols=550 Identities=27% Similarity=0.406 Sum_probs=463.2
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhccCc-hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 659 GSAGSGAIYPSYAYCLGSVVSAYFIKDD-SKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKI 737 (1224)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~l 737 (1224)
+.+.+.......|.++...++..-..+. ..........+..|.++.+.+.+++.++.+.+.++.+++.+..-.++|++.
T Consensus 38 ~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~el~~~vfa~v~q~~iR~~~~~vf~~~ 117 (591)
T KOG0057|consen 38 LLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNELRNFVFAKVAQRVIRDSSSDVFRHL 117 (591)
T ss_pred HHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333455566677777776665421111 111222334566788889999999999999999999999999999999999
Q ss_pred HcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 738 FTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYT-LSLLVTWRVAIVMIAVQPLNIGCFYSR 816 (1224)
Q Consensus 738 l~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~lv~l~~~pl~~~~~~~~ 816 (1224)
+.++.+||. +..+|++.+.+.+....+...+...+..++..++.+..... +..-++...+++.+..+.....+.+..
T Consensus 118 ~~ld~~~~~--~~~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~l~~~~Ga~~~li~~~~v~~Y~a~Ti~~ 195 (591)
T KOG0057|consen 118 MSLDLSFFL--SRGTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGILYYKFGAAFALITLGTVGAYAAFTIVV 195 (591)
T ss_pred HhhhHHhhc--CCCcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHhheeEEee
Confidence 999999999 56799999999999999988888877777777665555443 333345555555555555544444444
Q ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 817 SVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITL 896 (1224)
Q Consensus 817 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 896 (1224)
.......+++..++.+...+.+.|++.+..+||.||.|++..++|...+..+.+...+.....++..+....+.....+.
T Consensus 196 t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~~~~~~~~~sl~~lnfgQ~~iFsv~~~~ 275 (591)
T KOG0057|consen 196 TRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYERAGLKYSSSLAFLNFGQKAIFSVALTF 275 (591)
T ss_pred hhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHhhhhHHhHHHHHHHHHHHHHHHHHHH
Confidence 44555567777888888999999999999999999999999999999999999988888777777776666666666666
Q ss_pred HHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCCcc
Q 047171 897 TFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEIDPEDPKASEDIEEPTKG 976 (1224)
Q Consensus 897 ~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g 976 (1224)
+.+.+..-+..+.++.+++............|+..+...+.++.++..-++.++...+....+... . .+....++
T Consensus 276 im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~~~l~~~~~~i~~~----~-~~i~~~~~ 350 (591)
T KOG0057|consen 276 IMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTLFILLEVDEDIQEA----A-LPIELFGG 350 (591)
T ss_pred HHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhhhhhc----c-CCcccCCC
Confidence 666777767888999999998888888888999999999999999888888877665432221111 0 01223456
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+|+||+|.|+ |++++|+++||+|++||||||||+|||||||++++|+||++ ++|+|+|||+|+++++++.+|+.|
T Consensus 351 ~I~F~dV~f~y~--~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~sG~I~IdG~dik~~~~~SlR~~I 427 (591)
T KOG0057|consen 351 SIEFDDVHFSYG--PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-YSGSILIDGQDIKEVSLESLRQSI 427 (591)
T ss_pred cEEEEeeEEEeC--CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-cCCcEEECCeeHhhhChHHhhhhe
Confidence 799999999997 45679999999999999999999999999999999999999 999999999999999999999999
Q ss_pred EEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCC
Q 047171 1057 ALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPM 1136 (1224)
Q Consensus 1057 ~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ 1136 (1224)
||||||..||++||.+||.||++.+++||+.++|+.+++||.|.++|+||+|.|||+|..||||||||++||||++++|+
T Consensus 428 g~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG~~LSGGekQrvslaRa~lKda~ 507 (591)
T KOG0057|consen 428 GVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERGLMLSGGEKQRVSLARAFLKDAP 507 (591)
T ss_pred eEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcccccccchHHHHHHHHHHhcCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHH
Q 047171 1137 ILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKM 1216 (1224)
Q Consensus 1137 ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~ 1216 (1224)
|+++|||||+||.+||+.+.+.+.....+||+|+|+||++++++||+|++|++|++.|+|||+||++. .+.|+++|..
T Consensus 508 Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~e~gth~ell~~--s~~~~~~w~~ 585 (591)
T KOG0057|consen 508 ILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVKEYGTHSELLAP--SELYADLWTT 585 (591)
T ss_pred eEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeEEeccHHHHhhh--hhHHHHHhcc
Confidence 99999999999999999999999998899999999999999999999999999999999999999995 8999999988
Q ss_pred hhcc
Q 047171 1217 QASR 1220 (1224)
Q Consensus 1217 q~~~ 1220 (1224)
|...
T Consensus 586 ~~~~ 589 (591)
T KOG0057|consen 586 QTSS 589 (591)
T ss_pred cccc
Confidence 7654
No 36
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=6.3e-80 Score=768.94 Aligned_cols=565 Identities=32% Similarity=0.501 Sum_probs=510.3
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 641 RLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAI 720 (1224)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 720 (1224)
.++++.++.++.+++++++.++.+++.+..++++..+++..+.... ......+..+++++.++..++.++..+....
T Consensus 4 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (571)
T TIGR02203 4 RLWSYVRPYKAGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRD---RSVLWWVPLVVIGLAVLRGICSFVSTYLLSW 80 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555667777788888888888888888888888875543211 1122233445667777888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 721 MGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAI 800 (1224)
Q Consensus 721 ~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 800 (1224)
.+.++...+|..+++++++.|.++|+ +.+.|++.+|+++|++.++..+...+..++..++.+++.++++++++|.+++
T Consensus 81 ~~~~~~~~lr~~l~~~~~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l~~ 158 (571)
T TIGR02203 81 VSNKVVRDIRVRMFEKLLGLPVSFFD--RQPTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQLTL 158 (571)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhC--CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Confidence 99999999999999999999999998 6779999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 047171 801 VMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSG 880 (1224)
Q Consensus 801 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1224)
+++++.|+.+++.+...+..+...++..+..++..+.+.|.++|+++||+++.++.+.+++++..+...+...+.....+
T Consensus 159 i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (571)
T TIGR02203 159 IVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSAGS 238 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888888888888899999999999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 047171 881 IGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEID 960 (1224)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 960 (1224)
....+..++..+..++++++|++++..|.+++|.++++..++.....|+..+...+..+..+..+.+|+.++++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 318 (571)
T TIGR02203 239 ISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPEKD 318 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 88888888888889999999999999999999999999999999999999999999999999999999999998655432
Q ss_pred CCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEEC
Q 047171 961 PEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVD 1040 (1224)
Q Consensus 961 ~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id 1040 (1224)
... . ...+..+.|+++||+|+|+++ +.++|+|+||+|++||+++|+|+||||||||+++|+|+|+|++|+|++|
T Consensus 319 ~~~--~---~~~~~~~~i~~~~v~f~y~~~-~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~ 392 (571)
T TIGR02203 319 TGT--R---AIERARGDVEFRNVTFRYPGR-DRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLD 392 (571)
T ss_pred CCC--C---CCCCCCCeEEEEEEEEEcCCC-CCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEEC
Confidence 111 0 111234679999999999754 4579999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCC-CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCCh
Q 047171 1041 ERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKE-VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSG 1119 (1224)
Q Consensus 1041 G~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~-~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSG 1119 (1224)
|+|+++++.+++|++++||||+|++|+|||||||.++++ +.++++++++++.+++++++.++|+||||.+|++|.+|||
T Consensus 393 g~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSg 472 (571)
T TIGR02203 393 GHDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSG 472 (571)
T ss_pred CEeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCH
Confidence 999999999999999999999999999999999999986 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChh
Q 047171 1120 GQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQS 1199 (1224)
Q Consensus 1120 GQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~ 1199 (1224)
|||||||||||++++|+|||||||||+||+++++.|.+.|++..+++|+|+||||++.+..||+|++|++|++++.|+|+
T Consensus 473 GqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~ 552 (571)
T TIGR02203 473 GQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHN 552 (571)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHhhcCCCchhHHHHHHhh
Q 047171 1200 SLLSMGNGGAYYSLIKMQA 1218 (1224)
Q Consensus 1200 eLl~~~~~g~y~~l~~~q~ 1218 (1224)
+|+++ ++.|++++..+.
T Consensus 553 ~l~~~--~~~~~~~~~~~~ 569 (571)
T TIGR02203 553 ELLAR--NGLYAQLHNMQF 569 (571)
T ss_pred HHHHc--CCHHHHHHHHhh
Confidence 99986 789999988764
No 37
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2e-83 Score=702.71 Aligned_cols=531 Identities=28% Similarity=0.383 Sum_probs=444.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChHH--H-HH-HHHHH------------HHHHHHHHHHHHHHHHHHHHH
Q 047171 20 LFGTVGSIGDGMMTPLTMYILSMVINELGTSDISI--S-IE-AVDKV------------PEKGMCWTRTAERQASRIRME 83 (1224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~--~-~~-~~~~~------------~~~~~~~~~~~~~~~~~lR~~ 83 (1224)
+.+.++..+.-+.....|.+.++++|.+...+... + +. .+..+ -++.++|..+.+-..+++-.+
T Consensus 218 ~~cl~ll~i~rli~~~~pi~~k~iv~~ltap~~~~~~~~~~~v~L~flqg~gtgsG~~~nlRtfLWi~VqQyttR~ie~~ 297 (790)
T KOG0056|consen 218 VFCLFLLIIGRLINVSLPILSKWIVDELTAPDTFQYSLVFLYVFLKFLQGGGTGSGFLNNLRTFLWIPVQQYTTREIETE 297 (790)
T ss_pred HHHHHHHHHHHHHhhhhHHhHHHHHHhhcCcchhhHHHHHHHHHHHHHhcCCccccchhhhheeEEEEhhHhHHHHHHHH
Confidence 34444444555566667788899999876432111 1 11 11111 345667777888888999999
Q ss_pred HHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHH-HHHHHhHHHHHHHHHHHHHH
Q 047171 84 YLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSIL-VAFLLSWRLALAALPFSLLF 162 (1224)
Q Consensus 84 ~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~l~~l~~~~~~ 162 (1224)
+|+|+.++++.|+-+ + ++|+++.-++...+.+. ++...+.++...+.-+.++++ +...+||+.+|+++++..++
T Consensus 298 lfrHlh~LSlrwHL~---r-rtGeVLrvmdrGtssvt-ll~yvVF~i~PtllDl~va~vYF~~~Fn~wFgLIVfl~m~lY 372 (790)
T KOG0056|consen 298 LFRHLHNLSLRWHLN---R-RTGEVLRVMDRGTSSVT-LLEYVVFQIGPTLLDLGVAMVYFFIKFNIWFGLIVFLMMLLY 372 (790)
T ss_pred HHHHHHhhceeeeec---c-cccceeehhccCcchhh-HHHHHHhhcccHHHHhhhhhhhhhhhHhHHHHHHHHHHHHHH
Confidence 999999999999998 5 99999888887777666 444444444444443333333 33457999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Q 047171 163 IVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSM-GM 241 (1224)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 241 (1224)
..++..+...-.+..+++..+..+.-+...+++-+..|||-||+|+++.++|.+...++.+...|....-.+....- .+
T Consensus 373 ~~~Ti~iTeWRTk~rR~Mn~~~nesrAr~vDsllNFETVKyy~Ae~yEverYreAil~Yqk~E~ks~~sLnfLN~~Qn~I 452 (790)
T KOG0056|consen 373 CYVTIKITEWRTKARRKMNNSWNESRARQVDSLLNFETVKYYNAEDYEVERYREAILKYQKQEWKSLASLNFLNIVQNGI 452 (790)
T ss_pred hheeeeeehhhHHHHHHhhhhhhhhhhhhhhhhhcchhhhccCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 77766665555566677777777777888999999999999999999999999999999988877655444443333 44
Q ss_pred HHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccc
Q 047171 242 TYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTL 321 (1224)
Q Consensus 242 ~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~ 321 (1224)
..++.+..-.+.+|++..+.+|+|+++.|..|++.+..|+..++..+..+|+...-.++++++++++|++.+.+ +..+.
T Consensus 453 i~lgll~gsll~aY~Vt~q~ltVGDfVlf~TYliqLy~PLN~FGT~YR~iQ~nfiDmEnmfdllkee~eVvd~P-~a~pl 531 (790)
T KOG0056|consen 453 IGLGLLAGSLLCAYRVTEQTLTVGDFVLFLTYLIQLYMPLNFFGTYYRSIQKNFIDMENMFDLLKEEPEVVDLP-GAPPL 531 (790)
T ss_pred hhhHHhhhhheeeeeeeeccccccceehHHHHHHHHhCchHHHHHHHHHHHHhhhhHHHHHHHhhcCchhhcCC-CCCCc
Confidence 44444444555667788899999999999999999999999999999999999999999999999988876543 33444
Q ss_pred ccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHh
Q 047171 322 AYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLR 390 (1224)
Q Consensus 322 ~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 390 (1224)
...+|.|+|+||+|+|+++ ++|+++|+|||||+||||++++|.||||.++|+|.|||+||+.....++|
T Consensus 532 ~~~~G~i~fsnvtF~Y~p~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~sGsI~iDgqdIrnvt~~SLR 611 (790)
T KOG0056|consen 532 KVTQGKIEFSNVTFAYDPGKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVNSGSITIDGQDIRNVTQSSLR 611 (790)
T ss_pred cccCCeEEEEEeEEecCCCCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhccCceEEEcCchHHHHHHHHHH
Confidence 5567999999999999754 35779999999999999999999999999999999999999999999999
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
++||+||||..|||+||..||.||+|.+++||+.+|++.+++||-|..+|+||+|.|||+|-.|||||||||||||++++
T Consensus 612 s~IGVVPQDtvLFNdTI~yNIryak~~AsneevyaAAkAA~IHdrIl~fPegY~t~VGERGLkLSGGEKQRVAiARtiLK 691 (790)
T KOG0056|consen 612 SSIGVVPQDTVLFNDTILYNIRYAKPSASNEEVYAAAKAAQIHDRILQFPEGYNTRVGERGLKLSGGEKQRVAIARTILK 691 (790)
T ss_pred HhcCcccCcceeecceeeeheeecCCCCChHHHHHHHHHhhHHHHHhcCchhhhhhhhhcccccCCcchhhHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHH
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYS 550 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~ 550 (1224)
+|.|++|||+|||||..||+.||.+|.++..|||.|+|+||++++-+||.|+|+++|+|+|.|+|+||+++. +|.|+
T Consensus 692 ~P~iIlLDEATSALDT~tER~IQaaL~rlca~RTtIVvAHRLSTivnAD~ILvi~~G~IvErG~HeeLl~rd---gG~Ya 768 (790)
T KOG0056|consen 692 APSIILLDEATSALDTNTERAIQAALARLCANRTTIVVAHRLSTIVNADLILVISNGRIVERGRHEELLKRD---GGAYA 768 (790)
T ss_pred CCcEEEEcchhhhcCCccHHHHHHHHHHHhcCCceEEEeeeehheecccEEEEEeCCeEeecCcHHHHHhcc---CCcHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999884 89999
Q ss_pred HHHHHHHHh
Q 047171 551 KMVQLQQSA 559 (1224)
Q Consensus 551 ~~~~~~~~~ 559 (1224)
+||+.|+..
T Consensus 769 ~MWq~qqa~ 777 (790)
T KOG0056|consen 769 DMWQAQQAM 777 (790)
T ss_pred HHHHHHHhc
Confidence 999877653
No 38
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=2.9e-80 Score=788.10 Aligned_cols=538 Identities=25% Similarity=0.342 Sum_probs=472.8
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC-ChHHHHHHH----H----H---HHHHHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTS-DISISIEAV----D----K---VPEKGMCWTR 71 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~----~----~---~~~~~~~~~~ 71 (1224)
+++++++.+++++ .++..++++++..++....|++++.++|.+... +...+...+ . . .+++.++...
T Consensus 142 ~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~p~~~~~iid~v~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (710)
T TIGR03796 142 LRALWRRLRGSRG-ALLYLLLAGLLLVLPGLVIPAFSQIFVDEILVQGRQDWLRPLLLGMGLTALLQGVLTWLQLYYLRR 220 (710)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666665543 334555556666666667778999999986533 211111100 0 0 0556777788
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047171 72 TAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRL 151 (1224)
Q Consensus 72 ~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (1224)
.+.++..++|.++|+|++++|+++|++ . ++|++++|+++| +.+++++...+..++.+++++++.++++++++|.+
T Consensus 221 ~~~~~~~~l~~~~~~~ll~l~~~~~~~---~-~~g~~~~r~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 295 (710)
T TIGR03796 221 LQIKLAVGMSARFLWHILRLPVRFFAQ---R-HAGDIASRVQLN-DQVAEFLSGQLATTALDAVMLVFYALLMLLYDPVL 295 (710)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHcC---C-cccHHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 5 999999999988 78999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 152 ALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLT 231 (1224)
Q Consensus 152 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 231 (1224)
++++++.+|+.+++..++.++.++..++.++..++.++.+.|.++|+++||++++|+.+.++|.+...+..+...+..+.
T Consensus 296 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 375 (710)
T TIGR03796 296 TLIGIAFAAINVLALQLVSRRRVDANRRLQQDAGKLTGVAISGLQSIETLKASGLESDFFSRWAGYQAKLLNAQQELGVL 375 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888887
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047171 232 KGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV 310 (1224)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 310 (1224)
.++...+. ++..+..++++++|++++.+|.+|+|.++++..+......|+..+...+..++++..+.+|+.++++.+++
T Consensus 376 ~~~~~~~~~~i~~~~~~~il~~g~~~v~~g~lt~G~lva~~~l~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e 455 (710)
T TIGR03796 376 TQILGVLPTLLTSLNSALILVVGGLRVMEGQLTIGMLVAFQSLMSSFLEPVNNLVGFGGTLQELEGDLNRLDDVLRNPVD 455 (710)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 77776665 66667778889999999999999999999999999999999999999999999999999999999987655
Q ss_pred CCCCcc---c-cccc-ccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcE
Q 047171 311 INSEDE---I-GKTL-AYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGN 373 (1224)
Q Consensus 311 ~~~~~~---~-~~~~-~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~ 373 (1224)
.+.... . .... +...+.|+++||+|+|++. ++|+++|||||||||||||+++|+|+|+|++|+
T Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~I~~~~vsf~y~~~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~~G~ 535 (710)
T TIGR03796 456 PLLEEEEAPAAGSEPSPRLSGYVELRNITFGYSPLEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPWSGE 535 (710)
T ss_pred cccccccccccccccCCCCCCeEEEEEEEEecCCCCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcE
Confidence 322110 0 0111 2335789999999999742 357799999999999999999999999999999
Q ss_pred EEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCC
Q 047171 374 ILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQ 453 (1224)
Q Consensus 374 i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~ 453 (1224)
|++||+|+++++.+++|++||||+|||++|++||+|||+++.|++++++++++++.+++++++.++|+||||.+||+|.+
T Consensus 536 I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~gTi~eNi~l~~~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~G~~ 615 (710)
T TIGR03796 536 ILFDGIPREEIPREVLANSVAMVDQDIFLFEGTVRDNLTLWDPTIPDADLVRACKDAAIHDVITSRPGGYDAELAEGGAN 615 (710)
T ss_pred EEECCEeHHHCCHHHHHhheeEEecCChhhhccHHHHhhCCCCCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccCCCC
Confidence 99999999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeec
Q 047171 454 LSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESG 533 (1224)
Q Consensus 454 LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g 533 (1224)
|||||||||+||||++++|+|||||||||+||+++|+.+.+.+++ .++|+|+||||+++++.||+|++|++|+|++.|
T Consensus 616 LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~--~~~T~IiitHrl~~i~~~D~Iivl~~G~i~~~G 693 (710)
T TIGR03796 616 LSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR--RGCTCIIVAHRLSTIRDCDEIIVLERGKVVQRG 693 (710)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh--cCCEEEEEecCHHHHHhCCEEEEEeCCEEEEec
Confidence 999999999999999999999999999999999999999999976 589999999999999999999999999999999
Q ss_pred ChHHHHhhccCCCchHHHHH
Q 047171 534 SHDVLMQMNNGEGGAYSKMV 553 (1224)
Q Consensus 534 ~~~~l~~~~~~~~~~y~~~~ 553 (1224)
+|+||+++ ++.|++++
T Consensus 694 ~~~~Ll~~----~~~y~~l~ 709 (710)
T TIGR03796 694 THEELWAV----GGAYARLI 709 (710)
T ss_pred CHHHHHHc----CCcHHHHh
Confidence 99999987 78898876
No 39
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=6.2e-80 Score=782.32 Aligned_cols=530 Identities=24% Similarity=0.333 Sum_probs=469.9
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC-ChHHHHHHH-----HH------HHHHHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTS-DISISIEAV-----DK------VPEKGMCWTR 71 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~-----~~------~~~~~~~~~~ 71 (1224)
+++++++.+++++ .+...++++++..++....|++++.++|.+... +...+...+ .. .+++.++..+
T Consensus 135 ~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~l~~p~~~~~iiD~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (694)
T TIGR03375 135 KHWFWSTLKESWP-LYRDVLIASLLINLLALASPLFVMNVYDRVVPNQAFETLWVLAIGVALAIVFDFVLKTLRSYFLDV 213 (694)
T ss_pred chHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCcHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666665543 345566666777777778889999999986532 222111110 00 0566777888
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047171 72 TAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRL 151 (1224)
Q Consensus 72 ~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (1224)
.+.++..++|.++|+|++++|++| ++ . ++|++++|+ +|++.+++++...+...+.+++++++.++++++++|.+
T Consensus 214 ~~~~~~~~l~~~~~~~ll~l~~~~-~~---~-~~G~~~~r~-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 287 (694)
T TIGR03375 214 AGKKADLILSAKLFERVLGLRMEA-RP---A-SVGSFANQL-REFESVRDFFTSATLTALIDLPFALLFLLVIAIIGGPL 287 (694)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccc-CC---C-ChhHHHHHH-HHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 999999999999999999999998 55 4 999999999 79999999999988888888888888889999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 152 ALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLT 231 (1224)
Q Consensus 152 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 231 (1224)
++++++.+|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+.
T Consensus 288 ~li~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 367 (694)
T TIGR03375 288 VWVPLVAIPLILLPGLLLQRPLSRLAEESMRESAQRNAVLVESLSGLETIKALNAEGRFQRRWEQTVAALARSGLKSRFL 367 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047171 232 KGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV 310 (1224)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 310 (1224)
.+....+. .+..++.++++++|++++.+|.+|+|.++++..+......|+..+...+..++++..+.+|+.++++.+++
T Consensus 368 ~~~~~~~~~~~~~~~~~~il~~g~~~v~~g~ls~G~l~a~~~~~~~~~~p~~~l~~~~~~~~~~~~~~~ri~~il~~~~e 447 (694)
T TIGR03375 368 SNLATNFAQFIQQLVSVAIVVVGVYLISDGELTMGGLIACVMLSGRALAPLGQLAGLLTRYQQAKTALQSLDELMQLPVE 447 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88777666 66667777888999999999999999999999999999999999999999999999999999999987664
Q ss_pred CCCCcccccccccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECC
Q 047171 311 INSEDEIGKTLAYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDG 378 (1224)
Q Consensus 311 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g 378 (1224)
.+... .....+...+.|+|+||+|+|++. ++|+++||||+||||||||+++|+|+|+|++|+|.+||
T Consensus 448 ~~~~~-~~~~~~~~~~~I~~~~vsf~Y~~~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~~G~I~idg 526 (694)
T TIGR03375 448 RPEGT-RFLHRPRLQGEIEFRNVSFAYPGQETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPTEGSVLLDG 526 (694)
T ss_pred CCCCC-CCCCCCCccceEEEEEEEEEeCCCCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 32211 111122345689999999999742 25779999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHH
Q 047171 379 HKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQ 458 (1224)
Q Consensus 379 ~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 458 (1224)
+|+++++.+++|++|+||+|||++|++||+|||++++|++++++++++++.+++++++.++|+||||.+||+|.+|||||
T Consensus 527 ~~l~~~~~~~lr~~i~~v~Q~~~lf~~TI~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~G~~LSgGQ 606 (694)
T TIGR03375 527 VDIRQIDPADLRRNIGYVPQDPRLFYGTLRDNIALGAPYADDEEILRAAELAGVTEFVRRHPDGLDMQIGERGRSLSGGQ 606 (694)
T ss_pred EEhhhCCHHHHHhccEEECCChhhhhhhHHHHHhCCCCCCCHHHHHHHHHHcChHHHHHhCcccccceecCCCCCCCHHH
Confidence 99999999999999999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHH
Q 047171 459 KQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVL 538 (1224)
Q Consensus 459 ~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l 538 (1224)
||||+||||++++|+|||||||||+||+++|+.+++.+.+..+++|+|+||||+++++.||+|++|++|+++|+|+|+||
T Consensus 607 rQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~~~~T~iiItHrl~~~~~~D~iivl~~G~i~e~G~~~eL 686 (694)
T TIGR03375 607 RQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWLAGKTLVLVTHRTSLLDLVDRIIVMDNGRIVADGPKDQV 686 (694)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhCCEEEEEeCCEEEeeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred Hhh
Q 047171 539 MQM 541 (1224)
Q Consensus 539 ~~~ 541 (1224)
+++
T Consensus 687 l~~ 689 (694)
T TIGR03375 687 LEA 689 (694)
T ss_pred HHH
Confidence 876
No 40
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=4.7e-79 Score=760.66 Aligned_cols=566 Identities=26% Similarity=0.399 Sum_probs=491.3
Q ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 638 SLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYN 717 (1224)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 717 (1224)
.+++++++.++.++.+.+.+++.++..++....++++..+++..... .....+.++++++.++..+..++..+.
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (588)
T PRK13657 6 LYARVLQYLGAEKRLGILLAVANVLLAAATFAEPILFGRIIDAISGK------GDIFPLLAAWAGFGLFNIIAGVLVARH 79 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc------ccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566667777777777777778888888888888888888765431 111122333344444444455555555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 718 FAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWR 797 (1224)
Q Consensus 718 ~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 797 (1224)
..+...++..+++.++++++++.|..+|+ +...|++++|+++|++.+...+...+..++..++..++.+++++.++|.
T Consensus 80 ~~~~~~~~~~~l~~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (588)
T PRK13657 80 ADRLAHRRRLAVLTEYFERIIQLPLAWHS--QRGSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWR 157 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHC--cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56666666777778999999999999999 6789999999999999999888888888888888888888888999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHH
Q 047171 798 VAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSW 877 (1224)
Q Consensus 798 l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~ 877 (1224)
+++++++++|+...+.....+..+...++..+..++..+.+.|.++|+++||+|+.++.+.+++.+..+...+...+...
T Consensus 158 l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (588)
T PRK13657 158 LSLVLVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLS 237 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888877777777777777777788888999999999999999999999999999999999999998888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC
Q 047171 878 FSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKS 957 (1224)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~ 957 (1224)
.......+.+++..+..++++++|++++.+|.+++|.++++..+......|+..+...+..+..+..+.+|+.++++.++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~ 317 (588)
T PRK13657 238 WWALASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVP 317 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 88777788888888888889999999999999999999999999888899999999999999999999999999987654
Q ss_pred CCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceE
Q 047171 958 EIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSV 1037 (1224)
Q Consensus 958 ~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I 1037 (1224)
+.+.. +... ...+..+.|+++||+|+||++ +++|+|+||+++|||++||||+||||||||+++|+|+|+|++|+|
T Consensus 318 ~~~~~-~~~~--~~~~~~~~I~~~~vsf~y~~~--~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I 392 (588)
T PRK13657 318 DVRDP-PGAI--DLGRVKGAVEFDDVSFSYDNS--RQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRI 392 (588)
T ss_pred ccCCC-CCCC--CcCCCCCeEEEEEEEEEeCCC--CceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEE
Confidence 32111 1100 111223579999999999742 469999999999999999999999999999999999999999999
Q ss_pred EECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCC
Q 047171 1038 MVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQL 1117 (1224)
Q Consensus 1038 ~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~L 1117 (1224)
.+||+|+++++.+++|++|+||||||++|+|||||||.+++++.+|++++++++.+++++++.++|+|+||.+|++|.+|
T Consensus 393 ~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~L 472 (588)
T PRK13657 393 LIDGTDIRTVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQL 472 (588)
T ss_pred EECCEEhhhCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCC
Confidence 99999999999999999999999999999999999999998888999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 047171 1118 SGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1118 SGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt 1197 (1224)
|||||||||||||++++|+|||||||||+||+++++.|.+.|++..+++|+|+||||++.++.||+|++|++|+++|+|+
T Consensus 473 SgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~ 552 (588)
T PRK13657 473 SGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGS 552 (588)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999999998888999999999999999999999999999999999
Q ss_pred hhHHhhcCCCchhHHHHHHhh
Q 047171 1198 QSSLLSMGNGGAYYSLIKMQA 1218 (1224)
Q Consensus 1198 ~~eLl~~~~~g~y~~l~~~q~ 1218 (1224)
|++|+++ ++.|++|+..+.
T Consensus 553 ~~~l~~~--~~~y~~l~~~~~ 571 (588)
T PRK13657 553 FDELVAR--GGRFAALLRAQG 571 (588)
T ss_pred HHHHHHC--CChHHHHHHHhh
Confidence 9999986 799999998653
No 41
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.1e-78 Score=753.04 Aligned_cols=565 Identities=24% Similarity=0.373 Sum_probs=493.3
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 639 LLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNF 718 (1224)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 718 (1224)
+++++++.++.++.++++++++++..++....|++++.+++.....+. ...+.++++++.++..+..++..+..
T Consensus 7 ~~~l~~~l~~~k~~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (585)
T TIGR01192 7 YVRALSYLNVHKNRVLLIVIANITLAAITIAEPILFGRIIDAISSKSD------VLPTLALWAGFGVFNTIAYVLVAREA 80 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc------HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777888888888888888999999999999987643211 11122222333444455555555556
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 719 AIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRV 798 (1224)
Q Consensus 719 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 798 (1224)
.....++..++|.++|++++++|++||+ ++.+|++++|+++|++.+...+...+..++..++.+++.+++++.++|.+
T Consensus 81 ~~~~~~~~~~lr~~~~~~l~~l~~~~~~--~~~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 158 (585)
T TIGR01192 81 DRLAHGRRATLLTEAFGRIISMPLSWHQ--QRGTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRL 158 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhC--CCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666677777788999999999999999 67799999999999999999998888888888888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 047171 799 AIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWF 878 (1224)
Q Consensus 799 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1224)
++++++++|+.+++.....+..++..++..+..++..+.+.|.++|+++||+|+.++.+.+++.+..+...+...+..+.
T Consensus 159 ~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (585)
T TIGR01192 159 SIVLMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDW 238 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888777777777777777778888999999999999999999999999999999999988888888777
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 047171 879 SGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSE 958 (1224)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 958 (1224)
.+....+..++..+..++++++|++++.+|.+++|.++++..+......|+..+...+..+..+..+.+|+.++++.+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 318 (585)
T TIGR01192 239 WALASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQ 318 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 77777777778888888889999999999999999999998888888899999999999999999999999999876543
Q ss_pred CCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEE
Q 047171 959 IDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVM 1038 (1224)
Q Consensus 959 ~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~ 1038 (1224)
...... .. ..++..+.|+++||+|+|+++ .++|+|+||+|++||++||+||||||||||+++|+|+|+|++|+|.
T Consensus 319 ~~~~~~-~~--~~~~~~~~i~~~~v~~~y~~~--~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~ 393 (585)
T TIGR01192 319 REEPAD-AP--ELPNVKGAVEFRHITFEFANS--SQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQIL 393 (585)
T ss_pred ccCCcc-CC--CCCCCCCeEEEEEEEEECCCC--CccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEE
Confidence 221111 00 111234579999999999742 4589999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCC
Q 047171 1039 VDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLS 1118 (1224)
Q Consensus 1039 idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1118 (1224)
+||+|+++++.+.+|++++||||||++|++|++|||.++.+++++++++++++.+++++++.++|+|+||.+|++|.+||
T Consensus 394 ~~g~~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LS 473 (585)
T TIGR01192 394 IDGIDINTVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLS 473 (585)
T ss_pred ECCEEhhhCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCC
Confidence 99999999999999999999999999999999999999988889999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 047171 1119 GGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQ 1198 (1224)
Q Consensus 1119 GGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~ 1198 (1224)
|||||||+|||||+++|+|||||||||+||+++++.+++.|++..+++|+|+||||++++..||+|++|++|+++|.|+|
T Consensus 474 gGq~qrl~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~ 553 (585)
T TIGR01192 474 GGERQRLAIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSF 553 (585)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCH
Confidence 99999999999999999999999999999999999999999998889999999999999999999999999999999999
Q ss_pred hHHhhcCCCchhHHHHHHhh
Q 047171 1199 SSLLSMGNGGAYYSLIKMQA 1218 (1224)
Q Consensus 1199 ~eLl~~~~~g~y~~l~~~q~ 1218 (1224)
+||+++ +|.|+++|+.|.
T Consensus 554 ~~l~~~--~~~y~~l~~~~~ 571 (585)
T TIGR01192 554 QELIQK--DGRFYKLLRRSG 571 (585)
T ss_pred HHHHHC--CChHHHHHHhCc
Confidence 999986 899999998875
No 42
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=2.8e-79 Score=763.68 Aligned_cols=542 Identities=30% Similarity=0.433 Sum_probs=475.6
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChH-HHHH----HHHHH-------HHHHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSDIS-ISIE----AVDKV-------PEKGMCWTR 71 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~~~~----~~~~~-------~~~~~~~~~ 71 (1224)
+++++++.+++++. +++.+++.++..++....|++++.++|.....+.. .+.. .+... ++..++..+
T Consensus 13 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 91 (582)
T PRK11176 13 FRRLWPTIAPFKAG-LIVAGVALILNAASDTFMLSLLKPLLDDGFGKADRSVLKWMPLVVIGLMILRGITSFISSYCISW 91 (582)
T ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567777665443 44555556666666667778889999876533211 1110 00000 455567778
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047171 72 TAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRL 151 (1224)
Q Consensus 72 ~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (1224)
.+.++..++|.++|+++.++|.++|++ . ++|++++|+++|++.+++.+.+.+..++.+++++++.++++++++|.+
T Consensus 92 ~~~~~~~~lr~~~~~~l~~~~~~~~~~---~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 167 (582)
T PRK11176 92 VSGKVVMTMRRRLFGHMMGMPVSFFDK---Q-STGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQL 167 (582)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCC---C-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999998 5 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 152 ALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLT 231 (1224)
Q Consensus 152 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 231 (1224)
++++++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.
T Consensus 168 ~l~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (582)
T PRK11176 168 SLILIVIAPIVSIAIRVVSKRFRNISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNRMRQQGMKMVSA 247 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998888889999999999999999999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047171 232 KGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV 310 (1224)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 310 (1224)
..+..... ++..+..++++++|++++.+|.+++|.+++++.+......|+..+...+..++++..+.+|+.++++.+++
T Consensus 248 ~~~~~~~~~~~~~~~~~~i~~~g~~~~~~g~is~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~~~~~~~ 327 (582)
T PRK11176 248 SSISDPIIQLIASLALAFVLYAASFPSVMDTLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDLEQE 327 (582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 77776665 56666777788999999999999999999998888888899999999999999999999999999986544
Q ss_pred CCCCcccccccccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECC
Q 047171 311 INSEDEIGKTLAYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDG 378 (1224)
Q Consensus 311 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g 378 (1224)
.+... ...++..+.|+++||+|+|++. ++++++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 328 ~~~~~---~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~~G~I~i~g 404 (582)
T PRK11176 328 KDEGK---RVIERAKGDIEFRNVTFTYPGKEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDIDEGEILLDG 404 (582)
T ss_pred CCCCC---cCCCCCCCeEEEEEEEEecCCCCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCCCceEEECC
Confidence 22111 1122234579999999999753 25679999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCC-CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChH
Q 047171 379 HKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPG-ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGG 457 (1224)
Q Consensus 379 ~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 457 (1224)
+|+++++.+++|++|+||||||++|++||+|||++|+++ .++++++++++.++++++++++|+|+||.+||+|.+||||
T Consensus 405 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g~~LSGG 484 (582)
T PRK11176 405 HDLRDYTLASLRNQVALVSQNVHLFNDTIANNIAYARTEQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENGVLLSGG 484 (582)
T ss_pred EEhhhcCHHHHHhhceEEccCceeecchHHHHHhcCCCCCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCCCcCCHH
Confidence 999999999999999999999999999999999999764 7899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHH
Q 047171 458 QKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDV 537 (1224)
Q Consensus 458 q~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~ 537 (1224)
|||||+||||++++|+|||||||||+||+++++.+.+.+.+..+++|+|+||||++.++.||+|++|++|+|+|.|+|++
T Consensus 485 qrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~~~~tvI~VtHr~~~~~~~D~Ii~l~~g~i~e~g~~~~ 564 (582)
T PRK11176 485 QRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQKNRTSLVIAHRLSTIEKADEILVVEDGEIVERGTHAE 564 (582)
T ss_pred HHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HHhhccCCCchHHHHHHHHH
Q 047171 538 LMQMNNGEGGAYSKMVQLQQ 557 (1224)
Q Consensus 538 l~~~~~~~~~~y~~~~~~~~ 557 (1224)
|+++ ++.|+++++.|.
T Consensus 565 l~~~----~~~y~~l~~~~~ 580 (582)
T PRK11176 565 LLAQ----NGVYAQLHKMQF 580 (582)
T ss_pred HHhC----CChHHHHHHHHh
Confidence 9998 789999998653
No 43
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=2.5e-79 Score=754.93 Aligned_cols=525 Identities=22% Similarity=0.280 Sum_probs=452.4
Q ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 642 LLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIM 721 (1224)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 721 (1224)
++++.++.++.+++.+++.++..++....|++++.+++....... ......+...++++.++..++.++..++....
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (529)
T TIGR02868 4 ILPLLQPRTRRLVVAILLGALALGSAVALLGVSAWLISRAAEMPP---VLYLSVAAVAVRAFGIGRAVFRYLERLVGHDA 80 (529)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcch---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555666667777777777777888888888876542111 00000111122234566777888888889999
Q ss_pred HHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 722 GEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAIV 801 (1224)
Q Consensus 722 ~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv 801 (1224)
+.++..++|.+++++++++|.+||+ ++++|++++|+++|++.+++.+...+..++..++.+++.++++++++|.++++
T Consensus 81 ~~~~~~~lr~~~~~~ll~~~~~~~~--~~~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~l~ 158 (529)
T TIGR02868 81 ALRSLGRLRVRVYDRLARLALAGRR--RFQTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAALV 158 (529)
T ss_pred HHHHHHHHHHHHHHHhhccCccccc--cCChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 9999999999999999999999999 67899999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 047171 802 MIAVQPLNIGCF-YSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSG 880 (1224)
Q Consensus 802 ~l~~~pl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1224)
+++.+|+..++. +...+..+...++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..+..+
T Consensus 159 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02868 159 LAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARATG 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888877766554 3334444555566677788899999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 047171 881 IGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEID 960 (1224)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 960 (1224)
....+..++..+..++++++|++++..|.++.+.+.++..+......++..+...+..+.++..+.+|+.++++.+++.+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~ 318 (529)
T TIGR02868 239 LGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGPRP 318 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcC
Confidence 88888888888888889999999999999999999999888888889999999999999999999999999998765432
Q ss_pred CCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEEC
Q 047171 961 PEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVD 1040 (1224)
Q Consensus 961 ~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id 1040 (1224)
..+.... ...++..+.|+|+||+|+|+++ +++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+|
T Consensus 319 ~~~~~~~-~~~~~~~~~I~~~~vsf~Y~~~--~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~ 395 (529)
T TIGR02868 319 EGVVPAA-GALGLGKPTLELRDLSFGYPGS--PPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLD 395 (529)
T ss_pred CCCCCCC-cccCCCCceEEEEEEEEecCCC--CceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEEC
Confidence 1111100 0112234679999999999743 369999999999999999999999999999999999999999999999
Q ss_pred CccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1041 ERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1041 G~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
|+|++++ .+++|++|+||||||+||+|||||||++|+++++||++++|++.++++|||.++|+||||.+||+|.+||||
T Consensus 396 g~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGG 474 (529)
T TIGR02868 396 GVSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGG 474 (529)
T ss_pred CEEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHH
Confidence 9999999 999999999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCc
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRL 1175 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl 1175 (1224)
||||||||||++++|+|||||||||+||++||+.|++.+++..+++|+|+||||+
T Consensus 475 QrQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 475 ERQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 9999999999999999999999999999999999999999988999999999996
No 44
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.2e-79 Score=699.58 Aligned_cols=528 Identities=24% Similarity=0.315 Sum_probs=460.3
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhhhcCCC-hHHHHHHH----HHH-------HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 22 GTVGSIGDGMMTPLTMYILSMVINELGTSD-ISISIEAV----DKV-------PEKGMCWTRTAERQASRIRMEYLKSVL 89 (1224)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~~~----~~~-------~~~~~~~~~~~~~~~~~lR~~~~~~l~ 89 (1224)
..+++.+.+++...+.+++..+++.+.... ...+...+ ..+ +.+.....+.+.++..++|..+++|+.
T Consensus 5 ~~ll~~l~~i~~i~qa~llA~~l~~l~~~~~~~~l~~~~~~l~~~~~lRa~l~~~~~~~~~~aa~~~~~~LR~~~l~~l~ 84 (559)
T COG4988 5 SALLAVLSGIAIIAQAALLADILTKLIEGQLFQSLLPLLILLLIALVLRAFLAWLRERLGYRAAAKVRASLRQLVLDKLA 84 (559)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444555555555566666666543322 11111111 111 344555667788899999999999999
Q ss_pred cCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Q 047171 90 RQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALPFSLLFIVPGIVF 169 (1224)
Q Consensus 90 ~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~~~~ 169 (1224)
++++.+-++ . ++|+..+.+++.++.++.+++..+|.++...+.++..++.+|++||.-+++.++..|++.+....+
T Consensus 85 ~~gp~~~~~---~-~~g~~atl~~egve~l~~Y~~ryLPq~~~~~ivp~~i~i~v~~~~w~aalIllit~PlIPlfMilv 160 (559)
T COG4988 85 KLGPAFIAQ---K-PAGSAATLALEGIEQLEPYYARYLPQMFLSAIVPLLILIAIFFFNWAAALILLITAPLIPLFMILV 160 (559)
T ss_pred hCChhhhcC---C-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999998 4 999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH
Q 047171 170 GKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSM-GMTYGAWAF 248 (1224)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 248 (1224)
+++.++..+++.+.+.++++.+.+.++|+.|+|.|+..+...+++.+..++.++..++.-+..-...... ++.+++.++
T Consensus 161 g~~a~~~s~~~~~~~~~ls~~FLD~LrGL~TLr~f~~~~~~~~~i~~~se~fR~~TM~vLriAflSs~vLeffa~lsiAl 240 (559)
T COG4988 161 GLAAKDASEKQFSALARLSGHFLDRLRGLETLRAFGRTEATEERIRKDSEDFRKATMSVLRIAFLSSAVLEFFAYLSIAL 240 (559)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998777665555556 778888877
Q ss_pred HHHHHHHHHHh-cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccccc
Q 047171 249 QSWVGSVLVTE-RGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAYLRGE 327 (1224)
Q Consensus 249 ~~~~g~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~ 327 (1224)
+..+.+..... |.++....+.++...--.+.|+..++..++.-+.+.++.+.++.+++.+++..+.............+
T Consensus 241 vAv~~g~~ll~~G~ltl~~~l~~LiLAPEff~PlR~lGs~fH~~~~g~aa~d~i~~~l~~~~~~~~~~~~~~~~~~~~~e 320 (559)
T COG4988 241 VAVYIGFRLLGEGDLTLFAGLFVLILAPEFFQPLRDLGSFFHAAAAGEAAADKLFTLLESPVATPGSGEKAEVANEPPIE 320 (559)
T ss_pred HHHHHHHHHHccCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHhcCCCCCCCCccccccccCCCce
Confidence 77666666667 89998888888888888899999999999999999999999999998776533322110111112334
Q ss_pred EEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 328 IEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 328 i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
++++|++|.||+. ++++.+||||+||||||||+++|+|+++|++|+|.+||+++++++.+.+|++++||
T Consensus 321 i~~~~l~~~y~~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~~G~I~vng~~l~~l~~~~~~k~i~~v 400 (559)
T COG4988 321 ISLENLSFRYPDGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPTQGEIRVNGIDLRDLSPEAWRKQISWV 400 (559)
T ss_pred eeecceEEecCCCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCCCceEEECCccccccCHHHHHhHeeee
Confidence 6666999999865 24669999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEE
Q 047171 397 NQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILL 476 (1224)
Q Consensus 397 ~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ili 476 (1224)
+|+|++|++||+|||++++|+++++++.++++.+++.+|+.. |+|+||.+||+|.+|||||+||+++|||++++++++|
T Consensus 401 ~Q~p~lf~gTireNi~l~~~~~s~e~i~~al~~a~l~~~v~~-p~GLdt~ige~G~~LSgGQ~QRlaLARAll~~~~l~l 479 (559)
T COG4988 401 SQNPYLFAGTIRENILLARPDASDEEIIAALDQAGLLEFVPK-PDGLDTVIGEGGAGLSGGQAQRLALARALLSPASLLL 479 (559)
T ss_pred CCCCccccccHHHHhhccCCcCCHHHHHHHHHHhcHHHhhcC-CCcccchhccCCCCCCHHHHHHHHHHHHhcCCCCEEE
Confidence 999999999999999999999999999999999999999999 9999999999999999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHHH
Q 047171 477 LDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQ 556 (1224)
Q Consensus 477 lDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~ 556 (1224)
||||||+||.|||+.|.+.|.++.+++|+|+||||++.+.+||+|+|||+|+++|+|+|++|.++ +|.|++++..|
T Consensus 480 lDEpTA~LD~etE~~i~~~l~~l~~~ktvl~itHrl~~~~~~D~I~vld~G~l~~~g~~~~L~~~----~~~y~~l~~~q 555 (559)
T COG4988 480 LDEPTAHLDAETEQIILQALQELAKQKTVLVITHRLEDAADADRIVVLDNGRLVEQGTHEELSEK----QGLYANLLKQQ 555 (559)
T ss_pred ecCCccCCCHhHHHHHHHHHHHHHhCCeEEEEEcChHHHhcCCEEEEecCCceeccCCHHHHhhc----CcHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998 89999999887
Q ss_pred HH
Q 047171 557 QS 558 (1224)
Q Consensus 557 ~~ 558 (1224)
+.
T Consensus 556 ~~ 557 (559)
T COG4988 556 EG 557 (559)
T ss_pred hc
Confidence 53
No 45
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.8e-78 Score=756.16 Aligned_cols=569 Identities=32% Similarity=0.513 Sum_probs=498.3
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 640 LRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFA 719 (1224)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 719 (1224)
+.++++.++.++.+.+.+++.++.+++....|+++..+++..+.... ......++.+++++.++..+..+++.+...
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (576)
T TIGR02204 7 AALWPFVRPYRGRVLAALVALLITAAATLSLPYAVRLMIDHGFSKDS---SGLLNRYFAFLLVVALVLALGTAARFYLVT 83 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555556666677777777888888888888888876443211 112223344455556667777888888999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 720 IMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVA 799 (1224)
Q Consensus 720 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 799 (1224)
..+.++...+|..+++++++.|.++|+ ...+|++++|+++|++.+++++...+..++..++.+++.+++++.++|.++
T Consensus 84 ~~~~~~~~~lr~~l~~~l~~~~~~~~~--~~~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 161 (576)
T TIGR02204 84 WLGERVVADIRRAVFAHLISLSPSFFD--KNRSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKLT 161 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHc--cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 999999999999999999999999998 567999999999999999999998888888889889999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 047171 800 IVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFS 879 (1224)
Q Consensus 800 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (1224)
+++++.+|+.+.+.+...+..++..++..+...+..+.+.|.++|+++||+++.++.+.+++.+..+...+...+.....
T Consensus 162 ~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (576)
T TIGR02204 162 SLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRTR 241 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99998888888777778888888888888888899999999999999999999999999999999998888877777776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 047171 880 GIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEI 959 (1224)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 959 (1224)
.....+..++..+..++++++|++++.+|.++++.++++..+......|+..+...+.++..+..+.+|+.++++.+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~~ 321 (576)
T TIGR02204 242 ALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPDI 321 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcC
Confidence 66666666666677778888999999999999999999999888899999999999999999999999999999865542
Q ss_pred CCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEE
Q 047171 960 DPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMV 1039 (1224)
Q Consensus 960 ~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~i 1039 (1224)
+....... .+.+..+.|+++||+|+||+++++++|+|+||+|+|||++||+|+||||||||+++|+|+|+|++|+|++
T Consensus 322 ~~~~~~~~--~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i 399 (576)
T TIGR02204 322 KAPAHPKT--LPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILL 399 (576)
T ss_pred CCCCCCcc--CCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEE
Confidence 21110000 1112345799999999998643467999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCCh
Q 047171 1040 DERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSG 1119 (1224)
Q Consensus 1040 dG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSG 1119 (1224)
||+|+++++.+++|++++||||||++|+|||||||.+++++.+|++++++++.+++++++.++|+|+||.+||+|.+|||
T Consensus 400 ~g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSg 479 (576)
T TIGR02204 400 DGVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSG 479 (576)
T ss_pred CCEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChh
Q 047171 1120 GQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQS 1199 (1224)
Q Consensus 1120 GQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~ 1199 (1224)
||||||+||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+||||++.++.||+|++|++|+++|.|+|+
T Consensus 480 Gq~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~ 559 (576)
T TIGR02204 480 GQRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHA 559 (576)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHH
Confidence 99999999999999999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred HHhhcCCCchhHHHHHHh
Q 047171 1200 SLLSMGNGGAYYSLIKMQ 1217 (1224)
Q Consensus 1200 eLl~~~~~g~y~~l~~~q 1217 (1224)
+|+++ ++.|++|++.|
T Consensus 560 ~l~~~--~~~~~~l~~~~ 575 (576)
T TIGR02204 560 ELIAK--GGLYARLARLQ 575 (576)
T ss_pred HHHHc--CChHHHHHhhc
Confidence 99986 89999999776
No 46
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=9.9e-79 Score=752.59 Aligned_cols=544 Identities=24% Similarity=0.334 Sum_probs=477.3
Q ss_pred HhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Q 047171 664 GAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIG 743 (1224)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~ 743 (1224)
.++....|++++.+++........ ......|+++++++.++..++.++..++....+.++..++|.+++++++++|++
T Consensus 8 ~~~~~~~p~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~ 85 (569)
T PRK10789 8 AMLQLIPPKVVGIIVDGVTEQHMT--TGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPE 85 (569)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcc--hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHH
Confidence 344455677777777755322111 112233455555566667777888888888899999999999999999999999
Q ss_pred ccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 744 WFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLS-LLVTWRVAIVMIAVQPLNIGCFYSRSVLMKS 822 (1224)
Q Consensus 744 ~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~ 822 (1224)
||+ ++++|++++|+++|++.++..+...+..++..++..++.++++ +.++|.+++++++++|+.+++.+...+..++
T Consensus 86 ~~~--~~~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 86 FYL--RHRTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred HHc--CCCHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 6789999999999999999888777777777766666555555 5899999999999999888887777777777
Q ss_pred HHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 823 MSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAG 902 (1224)
Q Consensus 823 ~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 902 (1224)
..++.++..++..+.+.|.+.|+++||+|+.|+.+.++|.+..++..+...+..+..+....+......+..++++++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77778888888999999999999999999999999999999999999988888888887777777777777888889999
Q ss_pred HHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEE
Q 047171 903 RIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKN 982 (1224)
Q Consensus 903 ~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~ 982 (1224)
+++.+|.+|+|.++++..+......|+..+...+..+..+..+.+|+.++++.+++..... . ..++..+.|+++|
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~--~~~~~~~~I~~~~ 318 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---E--PVPEGRGELDVNI 318 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---C--CCCCCCCcEEEEE
Confidence 9999999999999999999999999999999999999999999999999998654322111 0 1112346799999
Q ss_pred EEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecC
Q 047171 983 VFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQE 1062 (1224)
Q Consensus 983 vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qd 1062 (1224)
|+|+|+.. +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++++||||+
T Consensus 319 v~~~y~~~-~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~ 397 (569)
T PRK10789 319 RQFTYPQT-DHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQT 397 (569)
T ss_pred EEEECCCC-CCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccC
Confidence 99999743 45799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEec
Q 047171 1063 PTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDE 1142 (1224)
Q Consensus 1063 p~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDE 1142 (1224)
|++|++|++|||.++.++.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+||||||
T Consensus 398 ~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDE 477 (569)
T PRK10789 398 PFLFSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDD 477 (569)
T ss_pred CeeccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999999999999988889999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHHhhc
Q 047171 1143 ATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKMQAS 1219 (1224)
Q Consensus 1143 aTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q~~ 1219 (1224)
|||+||+++++.+.+.|++..+++|+|+||||+++++.||+|++|++|+++|+|+|++|+++ +|.|++|++.|..
T Consensus 478 pts~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~--~~~y~~l~~~~~~ 552 (569)
T PRK10789 478 ALSAVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ--SGWYRDMYRYQQL 552 (569)
T ss_pred ccccCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc--CChHHHHHHHhhh
Confidence 99999999999999999998889999999999999999999999999999999999999986 7999999987654
No 47
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=3.1e-78 Score=765.92 Aligned_cols=541 Identities=29% Similarity=0.407 Sum_probs=478.0
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC-ChHHHHHHH-----H---H---HHHHHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTS-DISISIEAV-----D---K---VPEKGMCWTR 71 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~~-----~---~---~~~~~~~~~~ 71 (1224)
+.+++++.+++++ .+...++++++..++....|++++.++|.+... +...+...+ . . .+++.++...
T Consensus 127 ~~~~~~~~~~~~~-~~~~~~~~s~~~~ll~l~~p~~~~~iid~v~~~~~~~~l~~l~~~~~~~~~~~~~~~~l~~~~~~~ 205 (694)
T TIGR01846 127 FSWFIPAIIRYRK-QFREVLLISLALQLFALVTPLLFQVVIDKVLVHRGLSTLSVLALAMLAVAIFEPALGGLRTYLFAH 205 (694)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456666655543 345556666666667777788999999987532 222221110 0 0 0567777888
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047171 72 TAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRL 151 (1224)
Q Consensus 72 ~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (1224)
.+.++..++|.++|+|++++|++||++ . ++|++++|+ +|++.+++++...+..++.++.++++.++++++++|.+
T Consensus 206 ~~~~~~~~l~~~~~~~l~~l~~~~f~~---~-~~g~~~~rl-~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 280 (694)
T TIGR01846 206 LTSRIDVELGARLYRHLLGLPLGYFES---R-RVGDTVARV-RELEQIRNFLTGSALTVVLDLLFVVVFLAVMFFYSPTL 280 (694)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHcCC---C-CHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999998 5 999999999 69999999998888888888887777788999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 152 ALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLT 231 (1224)
Q Consensus 152 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 231 (1224)
++++++.+|+++++..++.++.++..++.++..++.++.+.|.++|+++||+||.|+.+.++|++..++..+...+..+.
T Consensus 281 ~li~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 360 (694)
T TIGR01846 281 TGVVIGSLVCYALLSVFVGPILRKRVEDKFERSAAATSFLVESVTGIETIKATATEPQFQNRWDRQLAAYVAASFRVTNL 360 (694)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHcccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047171 232 KGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV 310 (1224)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 310 (1224)
.+...... .+..++.++++|+|++++.+|.+|+|.++++..+......|+..+...+..++++..+++|+.++++.+++
T Consensus 361 ~~~~~~~~~~i~~~~~~~il~~g~~lv~~g~it~G~lia~~~l~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~e 440 (694)
T TIGR01846 361 GNIAGQAIELIQKLTFAILLWFGAHLVIGGALSPGQLVAFNMLAGRVTQPVLRLAQLWQDFQQTGIALERLGDILNSPTE 440 (694)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 87776666 66667778889999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCcccccccccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECC
Q 047171 311 INSEDEIGKTLAYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDG 378 (1224)
Q Consensus 311 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g 378 (1224)
.+.. .....+...+.|+++||+|+|++. ++|+++||||+||||||||+++|+|+|+|++|+|++||
T Consensus 441 ~~~~--~~~~~~~~~~~i~~~~vsf~y~~~~~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~~G~I~idg 518 (694)
T TIGR01846 441 PRSA--GLAALPELRGAITFENIRFRYAPDSPEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQHGQVLVDG 518 (694)
T ss_pred ccCC--CCCCCCCCCCeEEEEEEEEEcCCCCccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECC
Confidence 3221 111122345789999999999642 25679999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHH
Q 047171 379 HKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQ 458 (1224)
Q Consensus 379 ~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 458 (1224)
+|+++++.+++|++|+||+|+|++|++||+|||.+++|++++++++++|+.+++++++.++|+|+||.+|++|.+|||||
T Consensus 519 ~~i~~~~~~~~r~~i~~v~q~~~lf~~ti~eNi~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~gl~t~i~~~g~~LSgGq 598 (694)
T TIGR01846 519 VDLAIADPAWLRRQMGVVLQENVLFSRSIRDNIALCNPGAPFEHVIHAAKLAGAHDFISELPQGYNTEVGEKGANLSGGQ 598 (694)
T ss_pred EehhhCCHHHHHHhCeEEccCCeehhhhHHHHHhcCCCCCCHHHHHHHHHHcChHHHHHhCcCccCcEecCCCCCCCHHH
Confidence 99999999999999999999999999999999999999899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHH
Q 047171 459 KQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVL 538 (1224)
Q Consensus 459 ~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l 538 (1224)
|||++||||++++|+|||||||||+||+++++.+.+.|++..+++|+|+||||+++++.||+|++|++|++++.|+|+||
T Consensus 599 ~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~ii~l~~G~i~~~g~~~~l 678 (694)
T TIGR01846 599 RQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREICRGRTVIIIAHRLSTVRACDRIIVLEKGQIAESGRHEEL 678 (694)
T ss_pred HHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHhCCCEEEEEeCChHHHHhCCEEEEEeCCEEEEeCCHHHH
Confidence 99999999999999999999999999999999999999998889999999999999999999999999999999999999
Q ss_pred HhhccCCCchHHHHHHHH
Q 047171 539 MQMNNGEGGAYSKMVQLQ 556 (1224)
Q Consensus 539 ~~~~~~~~~~y~~~~~~~ 556 (1224)
++. ++.|+++++.|
T Consensus 679 ~~~----~~~y~~l~~~~ 692 (694)
T TIGR01846 679 LAL----QGLYARLWQQQ 692 (694)
T ss_pred HHc----CChHHHHHHhh
Confidence 987 89999998754
No 48
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=5.3e-78 Score=752.51 Aligned_cols=540 Identities=25% Similarity=0.360 Sum_probs=461.2
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CChH--HHHH----HHH----HH---HHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGT-SDIS--ISIE----AVD----KV---PEKGMCW 69 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-~~~~--~~~~----~~~----~~---~~~~~~~ 69 (1224)
++++++|.+++++ .+++.+++.++..++.+..|+++++++|.+.. .+.. .... .+. .. ++..+..
T Consensus 11 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (592)
T PRK10790 11 LKRLLAYGSPWRK-PLGLAVLMLWVAAAAEVSGPLLISYFIDNMVAKGNLPLGLVAGLAAAYVGLQLLAAGLHYAQSLLF 89 (592)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445555554433 44566777777778888888999999997643 2211 1110 010 00 4556677
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhH
Q 047171 70 TRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSW 149 (1224)
Q Consensus 70 ~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (1224)
...+.++..++|.++|+++++.|.++|++ . ++|++++|+++|++.+++.+.+.+..++.++..+++.++++++++|
T Consensus 90 ~~~~~~~~~~lr~~l~~~l~~~~~~~~~~---~-~~g~~~~~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (592)
T PRK10790 90 NRAAVGVVQQLRTDVMDAALRQPLSAFDT---Q-PVGQLISRVTNDTEVIRDLYVTVVATVLRSAALIGAMLVAMFSLDW 165 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCHHHhCC---C-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 78888999999999999999999999998 5 9999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Q 047171 150 RLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQG 229 (1224)
Q Consensus 150 ~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~ 229 (1224)
.+++++++++|+++++..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..
T Consensus 166 ~l~li~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (592)
T PRK10790 166 RMALVAIMIFPAVLVVMVIYQRYSTPIVRRVRAYLADINDGFNEVINGMSVIQQFRQQARFGERMGEASRSHYMARMQTL 245 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998889888888888888888888888899999999999999999999999999999999999888888777766
Q ss_pred HHHHHH-HHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 047171 230 LTKGLL-LGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDR 307 (1224)
Q Consensus 230 ~~~~~~-~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~ 307 (1224)
+..+.. .++. ++..+...+++++++. +..|.+++|.++++..+......|+..+...+..++++..+++|+.++++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~is~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~s~~ri~~~l~~ 324 (592)
T PRK10790 246 RLDGFLLRPLLSLFSALILCGLLMLFGF-SASGTIEVGVLYAFISYLGRLNEPLIELTTQQSMLQQAVVAGERVFELMDG 324 (592)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 665543 2222 2222222223333344 578999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCcccccccccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEE
Q 047171 308 VPVINSEDEIGKTLAYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILL 376 (1224)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~ 376 (1224)
+++.... ...+...++|+|+||+|+|++. ++|+++||||+||||||||+++|+|+|+|++|+|.+
T Consensus 325 ~~~~~~~----~~~~~~~~~i~~~~v~f~y~~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~~G~I~i 400 (592)
T PRK10790 325 PRQQYGN----DDRPLQSGRIDIDNVSFAYRDDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLTEGEIRL 400 (592)
T ss_pred CCccCCC----CccCCCCCeEEEEEEEEEeCCCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEE
Confidence 5432111 1112234679999999999742 256799999999999999999999999999999999
Q ss_pred CCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCCh
Q 047171 377 DGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSG 456 (1224)
Q Consensus 377 ~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSg 456 (1224)
||+|+++++.+++|++|+||||||++|++||+|||++|+ ++++++++++++.++++++++++|+|+||.+||+|.+|||
T Consensus 401 dg~~i~~~~~~~l~~~i~~v~Q~~~lF~~Ti~~NI~~~~-~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~g~~LSG 479 (592)
T PRK10790 401 DGRPLSSLSHSVLRQGVAMVQQDPVVLADTFLANVTLGR-DISEEQVWQALETVQLAELARSLPDGLYTPLGEQGNNLSV 479 (592)
T ss_pred CCEEhhhCCHHHHHhheEEEccCCccccchHHHHHHhCC-CCCHHHHHHHHHHcCcHHHHHhccccccccccCCCCCCCH
Confidence 999999999999999999999999999999999999998 5889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChH
Q 047171 457 GQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHD 536 (1224)
Q Consensus 457 Gq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~ 536 (1224)
||||||+|||||+++|+|||||||||+||+++++.+.+.+++..+++|+|+||||+++++.||+|++|++|++++.|+|+
T Consensus 480 GqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~~~tvIivtHr~~~l~~~D~ii~l~~G~i~~~G~~~ 559 (592)
T PRK10790 480 GQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVREHTTLVVIAHRLSTIVEADTILVLHRGQAVEQGTHQ 559 (592)
T ss_pred HHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEEEcCHH
Confidence 99999999999999999999999999999999999999999988889999999999999999999999999999999999
Q ss_pred HHHhhccCCCchHHHHHHHHHH
Q 047171 537 VLMQMNNGEGGAYSKMVQLQQS 558 (1224)
Q Consensus 537 ~l~~~~~~~~~~y~~~~~~~~~ 558 (1224)
||+++ ++.|+++++.|..
T Consensus 560 ~L~~~----~~~y~~l~~~~~~ 577 (592)
T PRK10790 560 QLLAA----QGRYWQMYQLQLA 577 (592)
T ss_pred HHHhC----CCHHHHHHHHHhh
Confidence 99988 8999999987743
No 49
>TIGR01192 chvA glucan exporter ATP-binding protein. This model describes glucan exporter ATP binding protein in bacteria. It belongs to the larger ABC transporter superfamily with the characteristic ATP binding motif. The In general, this protein is in some ways implicated in osmoregulation and suggested to participate in the export of glucan from the cytoplasm to periplasm. The cyclic beta-1,2-glucan in the bactrerial periplasmic space is suggested to confer the property of high osmolority. It has also been demonstrated that mutants in this loci have lost functions of virulence and motility. It is unclear as to how virulence and osmoadaptaion are related.
Probab=100.00 E-value=1.5e-77 Score=742.92 Aligned_cols=543 Identities=27% Similarity=0.362 Sum_probs=472.7
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChH-H-HHHHHHH---HHHHHHHHHHH----HH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSDIS-I-SIEAVDK---VPEKGMCWTRT----AE 74 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~-~~~~~~~---~~~~~~~~~~~----~~ 74 (1224)
++++++|.+++++ .++++++++++..++.+..|+++++++|.+...+.. . +...+.. .++..++..+. +.
T Consensus 7 ~~~l~~~l~~~k~-~~~~~~~~~~~~~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (585)
T TIGR01192 7 YVRALSYLNVHKN-RVLLIVIANITLAAITIAEPILFGRIIDAISSKSDVLPTLALWAGFGVFNTIAYVLVAREADRLAH 85 (585)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4577888877654 456777888888888888999999999986543211 1 1111111 13334444444 44
Q ss_pred HHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 047171 75 RQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALA 154 (1224)
Q Consensus 75 ~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 154 (1224)
++..++|.++|+|++++|++||++ . ++|++++|+++|++.+++.+.+.+..++..++++++.++++++++|.++++
T Consensus 86 ~~~~~lr~~~~~~l~~l~~~~~~~---~-~~g~~~s~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~li 161 (585)
T TIGR01192 86 GRRATLLTEAFGRIISMPLSWHQQ---R-GTSNALHTLLRATETLFGLWLEFMRQHLATFVALFLLIPTAFAMDWRLSIV 161 (585)
T ss_pred HHHHHHHHHHHHHHHcCCHHHhCC---C-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455556669999999999999998 5 999999999999999999999888888888888888889999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 155 ALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGL 234 (1224)
Q Consensus 155 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (1224)
+++++|+++++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+..++
T Consensus 162 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (585)
T TIGR01192 162 LMVLGILYILIAKLVMQRTKNGQAAVEHHYHNVFKHVSDSISNVSVVHSYNRIEAETSALKQFTNNLLSAQYPVLDWWAL 241 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888887777776
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 047171 235 LLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINS 313 (1224)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 313 (1224)
..++. .+..+..++++++|++++.+|.+++|.++++..++.....|+..+...+..++++..+++|+.++++.+++.++
T Consensus 242 ~~~~~~~~~~~~~~~v~~~g~~~v~~g~it~g~l~a~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~ri~~~~~~~~~~~~ 321 (585)
T TIGR01192 242 ASGLNRMASTISMMCILVIGTVLVIKGELSVGEVIAFIGFANLLIGRLDQMSGFITQIFEARAKLEDFFDLEDSVFQREE 321 (585)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccC
Confidence 66655 55666677788999999999999999999999999999999999999999999999999999999987554322
Q ss_pred CcccccccccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecC
Q 047171 314 EDEIGKTLAYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIK 382 (1224)
Q Consensus 314 ~~~~~~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~ 382 (1224)
.. .....+...+.|+++||+|+|++. ++|+++||+||||||||||+++|+|+|+|++|+|.+||++++
T Consensus 322 ~~-~~~~~~~~~~~i~~~~v~~~y~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~ 400 (585)
T TIGR01192 322 PA-DAPELPNVKGAVEFRHITFEFANSSQGVFDVSFEAKAGQTVAIVGPTGAGKTTLINLLQRVYDPTVGQILIDGIDIN 400 (585)
T ss_pred Cc-cCCCCCCCCCeEEEEEEEEECCCCCccccceeEEEcCCCEEEEECCCCCCHHHHHHHHccCCCCCCCEEEECCEEhh
Confidence 11 111112234579999999999752 256799999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHH
Q 047171 383 KLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRI 462 (1224)
Q Consensus 383 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qri 462 (1224)
+++.+++|++++||+|+|++|++|++|||.++.|++++++++++++.+++++++.++|+|++|.+|++|.+|||||||||
T Consensus 401 ~~~~~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~a~~~~~~~~~i~~l~~g~~t~~~~~~~~LSgGq~qrl 480 (585)
T TIGR01192 401 TVTRESLRKSIATVFQDAGLFNRSIRENIRLGREGATDEEVYEAAKAAAAHDFILKRSNGYDTLVGERGNRLSGGERQRL 480 (585)
T ss_pred hCCHHHHHhheEEEccCCccCcccHHHHHhcCCCCCCHHHHHHHHHHhCcHHHHHhccccccchhcCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999888899999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhc
Q 047171 463 AIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMN 542 (1224)
Q Consensus 463 aiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~ 542 (1224)
+|||||+++|++||||||||+||+++++.+.+.|++..+++|+|+||||+++++.||+|++|++|++++.|+|+|++++
T Consensus 481 ~lARall~~p~ililDEpts~LD~~~~~~i~~~l~~~~~~~tvI~isH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~- 559 (585)
T TIGR01192 481 AIARAILKNAPILVLDEATSALDVETEARVKNAIDALRKNRTTFIIAHRLSTVRNADLVLFLDQGRLIEKGSFQELIQK- 559 (585)
T ss_pred HHHHHHhcCCCEEEEECCccCCCHHHHHHHHHHHHHHhCCCEEEEEEcChHHHHcCCEEEEEECCEEEEECCHHHHHHC-
Confidence 9999999999999999999999999999999999988889999999999999999999999999999999999999987
Q ss_pred cCCCchHHHHHHHH
Q 047171 543 NGEGGAYSKMVQLQ 556 (1224)
Q Consensus 543 ~~~~~~y~~~~~~~ 556 (1224)
++.|+++++.+
T Consensus 560 ---~~~y~~l~~~~ 570 (585)
T TIGR01192 560 ---DGRFYKLLRRS 570 (585)
T ss_pred ---CChHHHHHHhC
Confidence 88999998765
No 50
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=3.7e-77 Score=744.05 Aligned_cols=541 Identities=31% Similarity=0.434 Sum_probs=483.1
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCC-hHHHHHHH----HH----H---HHHHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSD-ISISIEAV----DK----V---PEKGMCWTR 71 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~-~~~~~~~~----~~----~---~~~~~~~~~ 71 (1224)
+++++++.++++ ..++++++++++.+++.+..|++++.++|...... ...+.... .. . ++..++..+
T Consensus 2 ~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 80 (571)
T TIGR02203 2 FRRLWSYVRPYK-AGLVLAGVAMILVAATESTLAALLKPLLDDGFGGRDRSVLWWVPLVVIGLAVLRGICSFVSTYLLSW 80 (571)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666554 35677788888888888889999999999654322 11111100 00 0 566777888
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047171 72 TAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRL 151 (1224)
Q Consensus 72 ~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (1224)
.+.++..++|..+++++.+.|.++|++ . ++|++++|+++|++.+++++.+.+..++.+++.+++.++++++++|.+
T Consensus 81 ~~~~~~~~lr~~l~~~~~~~~~~~~~~---~-~~g~~~~~l~~di~~i~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~l 156 (571)
T TIGR02203 81 VSNKVVRDIRVRMFEKLLGLPVSFFDR---Q-PTGTLLSRITFDSEQVASAATDAFIVLVRETLTVIGLFIVLLYYSWQL 156 (571)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHhCC---C-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 999999999999999999999999998 4 999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 152 ALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLT 231 (1224)
Q Consensus 152 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 231 (1224)
++++++..|+.+++..++.++.++..++.++..++.++.+.|.++|+++||+++.|+.+.++|++..++..+...+..+.
T Consensus 157 ~~i~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (571)
T TIGR02203 157 TLIVVVMLPVLSILMRRVSKRLRRISKEIQNSMGQVTTVAEETLQGYRVVKLFGGQAYETRRFDAVSNRNRRLAMKMTSA 236 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988888888
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047171 232 KGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV 310 (1224)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 310 (1224)
.+....+. .+..+..++++++|++++.+|.+|+|.++++..++.....|+..+...+..+++++.+.+|+.++++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~ 316 (571)
T TIGR02203 237 GSISSPITQLIASLALAVVLFIALFQAQAGSLTAGDFTAFITAMIALIRPLKSLTNVNAPMQRGLAAAESLFTLLDSPPE 316 (571)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 88777666 66667777888999999999999999999999999999999999999999999999999999999987654
Q ss_pred CCCCcccccccccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECC
Q 047171 311 INSEDEIGKTLAYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDG 378 (1224)
Q Consensus 311 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g 378 (1224)
.+... ....+..++|+++||+|+|++. +++++++|+|+||||||||+++|+|+|+|++|+|++||
T Consensus 317 ~~~~~---~~~~~~~~~i~~~~v~f~y~~~~~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~~G~I~i~g 393 (571)
T TIGR02203 317 KDTGT---RAIERARGDVEFRNVTFRYPGRDRPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPDSGQILLDG 393 (571)
T ss_pred CCCCC---CCCCCCCCeEEEEEEEEEcCCCCCccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECC
Confidence 32211 1112234679999999999752 25669999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCC-CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChH
Q 047171 379 HKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKP-GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGG 457 (1224)
Q Consensus 379 ~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~-~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 457 (1224)
+|+++++.+++|++|+||||+|++|++||+|||.++++ +.++++++++++.+++++++.++|+|+||.+||+|.+||||
T Consensus 394 ~~i~~~~~~~~~~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~i~~~l~~~~l~~~i~~lp~gldt~i~~~g~~LSgG 473 (571)
T TIGR02203 394 HDLADYTLASLRRQVALVSQDVVLFNDTIANNIAYGRTEQADRAEIERALAAAYAQDFVDKLPLGLDTPIGENGVLLSGG 473 (571)
T ss_pred EeHHhcCHHHHHhhceEEccCcccccccHHHHHhcCCCCCCCHHHHHHHHHHcChHHHHHhCcCcccceecCCCCcCCHH
Confidence 99999999999999999999999999999999999986 78999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHH
Q 047171 458 QKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDV 537 (1224)
Q Consensus 458 q~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~ 537 (1224)
|||||+||||++++|+|||||||||+||+++++.+.+.|.+..+++|+|+||||++.++.||+|++|++|++++.|+|++
T Consensus 474 qrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~~~~tiIiitH~~~~~~~~D~ii~l~~g~i~~~g~~~~ 553 (571)
T TIGR02203 474 QRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLMQGRTTLVIAHRLSTIEKADRIVVMDDGRIVERGTHNE 553 (571)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHhCCCEEEEEehhhHHHHhCCEEEEEeCCEEEeeCCHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HHhhccCCCchHHHHHHHH
Q 047171 538 LMQMNNGEGGAYSKMVQLQ 556 (1224)
Q Consensus 538 l~~~~~~~~~~y~~~~~~~ 556 (1224)
+++. ++.|++++..+
T Consensus 554 l~~~----~~~~~~~~~~~ 568 (571)
T TIGR02203 554 LLAR----NGLYAQLHNMQ 568 (571)
T ss_pred HHHc----CCHHHHHHHHh
Confidence 9987 77898887654
No 51
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=5.6e-77 Score=741.99 Aligned_cols=544 Identities=29% Similarity=0.402 Sum_probs=468.1
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCh-HHHH-HHHHH-H--HHHHHHH----HHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSDI-SISI-EAVDK-V--PEKGMCW----TRTAE 74 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~~-~~~~~-~--~~~~~~~----~~~~~ 74 (1224)
+++++++.++++ ..+++.++++++..++.+..|++++.++|.+..... ..+. ..+.. . ++..+.. .+...
T Consensus 7 ~~~l~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (588)
T PRK13657 7 YARVLQYLGAEK-RLGILLAVANVLLAAATFAEPILFGRIIDAISGKGDIFPLLAAWAGFGLFNIIAGVLVARHADRLAH 85 (588)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667766553 345566677777777778888999999998654321 1111 00100 0 2222223 33444
Q ss_pred HHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 047171 75 RQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALA 154 (1224)
Q Consensus 75 ~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 154 (1224)
++..++|.++|+|++++|..+|++ . ++|++++|+++|++.+.+.+...+..++..++.+++.++++++++|.++++
T Consensus 86 ~~~~~l~~~l~~~l~~~~~~~~~~---~-~~g~~~~~~~~di~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 161 (588)
T PRK13657 86 RRRLAVLTEYFERIIQLPLAWHSQ---R-GSGRALHTLLRGTDALFGLWLEFMREHLATLVALVVLLPLALFMNWRLSLV 161 (588)
T ss_pred HHHHHHHHHHHHHHHhCCHHHHCc---C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555556669999999999999998 5 999999999999999999888888888888888888888999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 155 ALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGL 234 (1224)
Q Consensus 155 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (1224)
+++++|+.+++..++.++.++..++.++..++.++.+.|.++|+++||.|+.++.+.++|.+..++..+...+.....+.
T Consensus 162 ~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (588)
T PRK13657 162 LVVLGIVYTLITTLVMRKTKDGQAAVEEHYHDLFAHVSDAIGNVSVVQSYNRIEAETQALRDIADNLLAAQMPVLSWWAL 241 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888889999999999999999999999999999999999999999999999999999999888887777776
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCC
Q 047171 235 LLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINS 313 (1224)
Q Consensus 235 ~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~ 313 (1224)
...+. ++..+..++++++|++++.+|.+|+|.+++++.+......|+..+...+..+.++..+++|+.++++.+++.+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~a~~~l~~~~~~~l~~l~~~~~~~~~~~~~~~~i~~l~~~~~~~~~ 321 (588)
T PRK13657 242 ASVLNRAASTITMLAILVLGAALVQKGQLRVGEVVAFVGFATLLIGRLDQVVAFINQVFMAAPKLEEFFEVEDAVPDVRD 321 (588)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC
Confidence 66555 55666677788999999999999999999999999999999999999999999999999999999986554222
Q ss_pred CcccccccccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecC
Q 047171 314 EDEIGKTLAYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIK 382 (1224)
Q Consensus 314 ~~~~~~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~ 382 (1224)
.. .....+...+.|+++||+|+|++. ++++++||||+||||||||+++|+|+|+|++|+|.+||+|++
T Consensus 322 ~~-~~~~~~~~~~~I~~~~vsf~y~~~~~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~~G~I~i~g~~i~ 400 (588)
T PRK13657 322 PP-GAIDLGRVKGAVEFDDVSFSYDNSRQGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQSGRILIDGTDIR 400 (588)
T ss_pred CC-CCCCcCCCCCeEEEEEEEEEeCCCCceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEEhh
Confidence 11 111122234579999999999753 256799999999999999999999999999999999999999
Q ss_pred CCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHH
Q 047171 383 KLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRI 462 (1224)
Q Consensus 383 ~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qri 462 (1224)
+++.+++|++|+||||+|++|++||+|||++++|+.++++++++++.+++++++.++|+|+||.+|++|.+|||||||||
T Consensus 401 ~~~~~~~r~~i~~v~Q~~~lf~~Ti~~Ni~~~~~~~~d~~i~~al~~~~l~~~i~~lp~gldt~i~~~g~~LSgGq~QRi 480 (588)
T PRK13657 401 TVTRASLRRNIAVVFQDAGLFNRSIEDNIRVGRPDATDEEMRAAAERAQAHDFIERKPDGYDTVVGERGRQLSGGERQRL 480 (588)
T ss_pred hCCHHHHHhheEEEecCcccccccHHHHHhcCCCCCCHHHHHHHHHHhCHHHHHHhCcccccchhcCCCCCCCHHHHHHH
Confidence 99999999999999999999999999999999988899999999999999999999999999999999999999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhc
Q 047171 463 AIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMN 542 (1224)
Q Consensus 463 aiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~ 542 (1224)
+||||++++|+|||||||||+||+++++.+.+.+.+..+++|+|+||||++.++.||+|++|++|++++.|+|++|+++
T Consensus 481 alARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~~~~tvIiitHr~~~~~~~D~ii~l~~G~i~~~g~~~~l~~~- 559 (588)
T PRK13657 481 AIARALLKDPPILILDEATSALDVETEAKVKAALDELMKGRTTFIIAHRLSTVRNADRILVFDNGRVVESGSFDELVAR- 559 (588)
T ss_pred HHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHhcCCEEEEEEecHHHHHhCCEEEEEECCEEEEeCCHHHHHHC-
Confidence 9999999999999999999999999999999999988789999999999999999999999999999999999999987
Q ss_pred cCCCchHHHHHHHHH
Q 047171 543 NGEGGAYSKMVQLQQ 557 (1224)
Q Consensus 543 ~~~~~~y~~~~~~~~ 557 (1224)
++.|+++++.+.
T Consensus 560 ---~~~y~~l~~~~~ 571 (588)
T PRK13657 560 ---GGRFAALLRAQG 571 (588)
T ss_pred ---CChHHHHHHHhh
Confidence 789999988654
No 52
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit. The gene pair cydCD encodes an ABC-family transporter in which each gene contains an N-terminal membrane-spanning domain (pfam00664) and a C-terminal ATP-binding domain (pfam00005). In E. coli these genes were discovered as mutants which caused the terminal heme-copper oxidase complex cytochrome bd to fail to assemble. Recent work has shown that the transporter is involved in export of redox-active thiol compounds such as cysteine and glutathione. The linkage to assembly of the cytochrome bd complex is further supported by the conserved operon structure found outside the gammaproteobacteria (cydABCD) containing both the transporter and oxidase genes components. The genes used as the seed members for this model are all either found in the gammproteobacterial context or the CydABCD context. All members of this family scoring above trusted at the time of its creation were from genomes which encode a cytochrome bd complex.
Probab=100.00 E-value=1.4e-77 Score=739.24 Aligned_cols=502 Identities=22% Similarity=0.258 Sum_probs=435.0
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChH-HHH-HH--H--HHH------HHHHHHHHHH
Q 047171 5 GGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSDIS-ISI-EA--V--DKV------PEKGMCWTRT 72 (1224)
Q Consensus 5 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~-~~~-~~--~--~~~------~~~~~~~~~~ 72 (1224)
+++++|.+++++ .+++++++.++.+++....|+++++++|.....+.. .+. .. + ... ++..++..+.
T Consensus 2 ~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (529)
T TIGR02868 2 LRILPLLQPRTR-RLVVAILLGALALGSAVALLGVSAWLISRAAEMPPVLYLSVAAVAVRAFGIGRAVFRYLERLVGHDA 80 (529)
T ss_pred hhHHHHHHhhHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456777776654 455667777777777778889999999976432211 110 00 0 000 5566777888
Q ss_pred HHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHH
Q 047171 73 AERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLA 152 (1224)
Q Consensus 73 ~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 152 (1224)
+.++..++|.++|+|++++|.+||++ . ++|++++|+++|++.+++.+...+..++.+++.+++.++++++++|.++
T Consensus 81 ~~~~~~~lr~~~~~~ll~~~~~~~~~---~-~~g~~~~~l~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 156 (529)
T TIGR02868 81 ALRSLGRLRVRVYDRLARLALAGRRR---F-QTGDLLGRLGADVDALQDLYVRVIVPLVVALVVGSAAVAAIALLSVPAA 156 (529)
T ss_pred HHHHHHHHHHHHHHHhhccCcccccc---C-ChhhHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999999999998 5 9999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 153 LAALPFSLLFIVPGIVFG-KVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLT 231 (1224)
Q Consensus 153 l~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 231 (1224)
+++++.+|++.++..++. +..++..++.++..++.++.+.|.++|+++||+|++|+.+.++|++..++..+...+..+.
T Consensus 157 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (529)
T TIGR02868 157 LVLAAGLLLAGFVAPLVSLRAARAAEVALARLRSQLYQQLTDALDGAADLVAYGALDPALAQVEAADRELLAAERRAARA 236 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHhccHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999888888766654444 4446667778888999999999999999999999999999999999999999999888888
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047171 232 KGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV 310 (1224)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 310 (1224)
.+...++. ++..+..++++++|++++.+|.+++|.++++..+......|+..+...+..++++.++.+|+.++++.+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~t~g~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ri~~~l~~~~~ 316 (529)
T TIGR02868 237 TGLGAAAQLLAAGLAVLGALWAGGPAVADGTLAPATLAVLVLLPLAAFEAFAPLPAAAQALTRVRAAAERIEEVTGAKGP 316 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 88777666 66667777788999999999999999999999999999999999998999999999999999999987654
Q ss_pred CCCCccc-ccccccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECC
Q 047171 311 INSEDEI-GKTLAYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDG 378 (1224)
Q Consensus 311 ~~~~~~~-~~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g 378 (1224)
.+..... ........++|+|+||+|+|++. ++|+++|||||||||||||+++|+|+|+|++|+|.+||
T Consensus 317 ~~~~~~~~~~~~~~~~~~I~~~~vsf~Y~~~~~vL~~isl~i~~G~~vaIvG~SGsGKSTLl~lL~g~~~p~~G~I~i~g 396 (529)
T TIGR02868 317 RPEGVVPAAGALGLGKPTLELRDLSFGYPGSPPVLDGVSLDLPPGERVAILGPSGSGKSTLLMLLTGLLDPLQGEVTLDG 396 (529)
T ss_pred cCCCCCCCCcccCCCCceEEEEEEEEecCCCCceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECC
Confidence 3221100 01111234579999999999753 25779999999999999999999999999999999999
Q ss_pred EecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHH
Q 047171 379 HKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQ 458 (1224)
Q Consensus 379 ~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 458 (1224)
+|++++ .+++|++|+||||||+||++||+|||++|+|++++++++++++.+++++|+.++|+||||.+||+|.+|||||
T Consensus 397 ~~i~~~-~~~lr~~i~~V~Q~~~lF~~TI~eNI~~g~~~~~~e~i~~al~~a~l~~~i~~lp~GldT~ige~G~~LSGGQ 475 (529)
T TIGR02868 397 VSVSSL-QDELRRRISVFAQDAHLFDTTVRDNLRLGRPDATDEELWAALERVGLADWLRSLPDGLDTVLGEGGARLSGGE 475 (529)
T ss_pred EEhhhH-HHHHHhheEEEccCcccccccHHHHHhccCCCCCHHHHHHHHHHcCCHHHHHhCcccccchhccccCcCCHHH
Confidence 999999 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCc
Q 047171 459 KQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRL 512 (1224)
Q Consensus 459 ~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l 512 (1224)
|||||||||++++|+|||||||||+||+++|+.|++.+.+..+++|+|+||||+
T Consensus 476 rQRiaiARall~~~~iliLDE~TSaLD~~te~~I~~~l~~~~~~~TvIiItHrl 529 (529)
T TIGR02868 476 RQRLALARALLADAPILLLDEPTEHLDAGTESELLEDLLAALSGKTVVVITHHL 529 (529)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEecCC
Confidence 999999999999999999999999999999999999999988899999999996
No 53
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=9.1e-80 Score=670.77 Aligned_cols=491 Identities=31% Similarity=0.457 Sum_probs=432.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 047171 716 YNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAY-TLSLLV 794 (1224)
Q Consensus 716 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 794 (1224)
..+..+++.+...+--+.|.|+.++++.|.- +..+|.+...+......++..+...+..++..++-+.... ++...+
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl--~r~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~~~ 81 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHL--ERRTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWRVY 81 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhh--hcccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHhhc
Confidence 4566778888888899999999999999987 4456776666666666666666666666666665444444 344567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHH
Q 047171 795 TWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIK 874 (1224)
Q Consensus 795 ~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~ 874 (1224)
+|+.+++.++++.+.+++........-...++...+.+..+....+++-+..|+|.|+.|+.+..+|...++.+.++..+
T Consensus 82 ~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~~k 161 (497)
T COG5265 82 GWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAAIK 161 (497)
T ss_pred ccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHHHH
Confidence 89999988888887777766555555566778888889999999999999999999999999999999999999999888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 047171 875 QSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILD 954 (1224)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~ 954 (1224)
.....++.......+......+....+...+..|.+|.|+++..-.++.....|+..+...+.++.++....++++++++
T Consensus 162 ~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdLl~ 241 (497)
T COG5265 162 VHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDLLD 241 (497)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHhhc
Confidence 77766666666677777777777778888889999999999998888888899999999999999999999999999998
Q ss_pred cCCCCCCCCCCCCCCCCC-CCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC
Q 047171 955 RKSEIDPEDPKASEDIEE-PTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ 1033 (1224)
Q Consensus 955 ~~~~~~~~~~~~~~~~~~-~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~ 1033 (1224)
.+.+..... ..+ +.+ -..|.|.|+||+|.|. |..|+|+|+||++++|+++||||+||+||||+.++|+|||+++
T Consensus 242 ~~~~v~d~p-da~--~L~~~~~g~v~F~~V~F~y~--~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~ 316 (497)
T COG5265 242 VEAEVSDAP-DAP--PLWPVRLGAVAFINVSFAYD--PRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVN 316 (497)
T ss_pred cchhhccCC-CCc--cccccccceEEEEEEEeecc--ccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCc
Confidence 776543321 111 223 3457899999999996 4578999999999999999999999999999999999999999
Q ss_pred CceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCC
Q 047171 1034 SGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGER 1113 (1224)
Q Consensus 1034 ~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~ 1113 (1224)
+|.|.|||+|++++..+++|+.||+||||..||++|+..||.||+|.++++|+++|++.+++++||+++|+||||.|||+
T Consensus 317 sG~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vger 396 (497)
T COG5265 317 SGSITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGER 396 (497)
T ss_pred CceEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEE
Q 047171 1114 GVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVV 1193 (1224)
Q Consensus 1114 G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Iv 1193 (1224)
|-.||||||||+||||++|++|+||+||||||+||.+||++||.+|++..+|+|+++|||||+|+.+||.|+||++|+|+
T Consensus 397 glklSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~ 476 (497)
T COG5265 397 GLKLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIV 476 (497)
T ss_pred eeeccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecChhHHhhcCCCchhHHHHH
Q 047171 1194 EQGTQSSLLSMGNGGAYYSLIK 1215 (1224)
Q Consensus 1194 e~Gt~~eLl~~~~~g~y~~l~~ 1215 (1224)
|.|||+||+++ +|.|++||.
T Consensus 477 erg~h~~ll~~--~g~ya~mw~ 496 (497)
T COG5265 477 ERGTHEELLAA--GGLYAEMWR 496 (497)
T ss_pred ecCcHHHHHHc--CChHHHHhc
Confidence 99999999997 899999995
No 54
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.1e-76 Score=734.18 Aligned_cols=518 Identities=27% Similarity=0.384 Sum_probs=455.3
Q ss_pred HhHHHHHHHHHHHHHhhhcCC--ChHHHHHHH----HH----H---HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhh
Q 047171 30 GMMTPLTMYILSMVINELGTS--DISISIEAV----DK----V---PEKGMCWTRTAERQASRIRMEYLKSVLRQEVGFF 96 (1224)
Q Consensus 30 ~~~~~~~~~~~~~~id~~~~~--~~~~~~~~~----~~----~---~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f 96 (1224)
.++..+.|++++.++|.+... +...+...+ .. . ++..++....+.++..++|.++|+|++++|.++|
T Consensus 8 ~~~~~~~p~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~~~ll~~~~~~~ 87 (569)
T PRK10789 8 AMLQLIPPKVVGIIVDGVTEQHMTTGQILMWIGTMVLIAVVVYLLRYVWRVLLFGASYQLAVELREDFYRQLSRQHPEFY 87 (569)
T ss_pred HHHHHHHHHHHHHHHHHhccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHH
Confidence 344445667899999976432 111111100 00 0 4455667778899999999999999999999999
Q ss_pred hccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 97 DNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVA-FLLSWRLALAALPFSLLFIVPGIVFGKVLKD 175 (1224)
Q Consensus 97 ~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~ 175 (1224)
++ . ++|++++|+++|++.++..+...+..++..++.++++++++ ++++|.+++++++++|+++++..++.++.++
T Consensus 88 ~~---~-~~g~i~srl~~Dv~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~li~l~~~~l~~~~~~~~~~~~~~ 163 (569)
T PRK10789 88 LR---H-RTGDLMARATNDVDRVVFAAGEGVLTLVDSLVMGCAVLIVMSTQISWQLTLLALLPMPVMAIMIKRYGDQLHE 163 (569)
T ss_pred cC---C-CHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98 5 99999999999999999888888888888776666666655 5899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Q 047171 176 LGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSM-GMTYGAWAFQSWVGS 254 (1224)
Q Consensus 176 ~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~ 254 (1224)
..++.++..+++++.+.|.++|+++||+|++|+.+.++|.+..++..+...+..+..+...+.. .+..++.++++++|+
T Consensus 164 ~~~~~~~~~~~~~~~~~e~l~~i~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~ 243 (569)
T PRK10789 164 RFKLAQAAFSSLNDRTQESLTSIRMIKAFGLEDRQSALFAADAEDTGKKNMRVARIDARFDPTIYIAIGMANLLAIGGGS 243 (569)
T ss_pred HHHHHHHHHHHHHHHHHHHHcChHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888888777766655 555566677888999
Q ss_pred HHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccccccccccccEEEEeEE
Q 047171 255 VLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAYLRGEIEFKDVD 334 (1224)
Q Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~ 334 (1224)
+++.+|.+|+|.++++..+......|+..+...+..++++.++.+|+.++++.+++.+... ...+...+.|+++||+
T Consensus 244 ~lv~~g~lt~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~ll~~~~~~~~~~---~~~~~~~~~I~~~~v~ 320 (569)
T PRK10789 244 WMVVNGSLTLGQLTSFVMYLGLMIWPMLALAWMFNIVERGSAAYSRIRAMLAEAPVVKDGS---EPVPEGRGELDVNIRQ 320 (569)
T ss_pred HHHHcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCC---CCCCCCCCcEEEEEEE
Confidence 9999999999999999999999999999999999999999999999999998765432211 1122234679999999
Q ss_pred EECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCC
Q 047171 335 FSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPIL 402 (1224)
Q Consensus 335 f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l 402 (1224)
|+|++. ++|++++|+||||||||||+++|+|+|+|++|+|.+||+++++++..++|++|+||+|+|++
T Consensus 321 ~~y~~~~~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~l 400 (569)
T PRK10789 321 FTYPQTDHPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVSEGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFL 400 (569)
T ss_pred EECCCCCCccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEHhhCCHHHHHhheEEEccCCee
Confidence 999742 25669999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 047171 403 FSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATS 482 (1224)
Q Consensus 403 f~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts 482 (1224)
|++|++|||+++.|+.++++++++++.+++++++.++|+|+||.+|++|.+||||||||++||||++++|+|||||||||
T Consensus 401 f~~ti~~Ni~~~~~~~~~~~~~~~~~~~~l~~~i~~lp~gl~t~~~~~g~~LSgGq~qRi~lARall~~~~illlDEpts 480 (569)
T PRK10789 401 FSDTVANNIALGRPDATQQEIEHVARLASVHDDILRLPQGYDTEVGERGVMLSGGQKQRISIARALLLNAEILILDDALS 480 (569)
T ss_pred ccccHHHHHhcCCCCCCHHHHHHHHHHcCCHHHHHhCcCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEECccc
Confidence 99999999999988889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHHHHH
Q 047171 483 ALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQS 558 (1224)
Q Consensus 483 ~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~ 558 (1224)
+||+++++.+.+.|++..+++|+|+||||+++++.||+|++|++|+++++|+|++++++ ++.|+++++.|..
T Consensus 481 ~LD~~~~~~i~~~l~~~~~~~tii~itH~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~----~~~y~~l~~~~~~ 552 (569)
T PRK10789 481 AVDGRTEHQILHNLRQWGEGRTVIISAHRLSALTEASEILVMQHGHIAQRGNHDQLAQQ----SGWYRDMYRYQQL 552 (569)
T ss_pred cCCHHHHHHHHHHHHHHhCCCEEEEEecchhHHHcCCEEEEEeCCEEEEecCHHHHHHc----CChHHHHHHHhhh
Confidence 99999999999999988889999999999999999999999999999999999999987 7899999987653
No 55
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2e-76 Score=729.05 Aligned_cols=527 Identities=25% Similarity=0.342 Sum_probs=462.0
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 651 KRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVR 730 (1224)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr 730 (1224)
+.+.++++++++.+++.+..|++++.+++........ ......+.++++++.++..++.++..+.....+.++..++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 80 (529)
T TIGR02857 3 RALALLGLLGALGALLIIAQAWLLARVIDGLISAGEP--LAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLR 80 (529)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455666777777888888899999988866422111 12233455566677778888999999999999999999999
Q ss_pred HHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 731 EKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPLNI 810 (1224)
Q Consensus 731 ~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~ 810 (1224)
.++++++++.|..+|+ +.++|++++|+++|++.+++.+...+..++..++.+++.+++++.++|.+++++++.+|+.+
T Consensus 81 ~~l~~~l~~~~~~~~~--~~~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~ 158 (529)
T TIGR02857 81 ERLLAAVAALGPGWLQ--GRPSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIP 158 (529)
T ss_pred HHHHHHHHhCCchhhc--cCChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 9999999999999998 67899999999999999999999888888888888888888999999999999998888887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 811 GCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLT 890 (1224)
Q Consensus 811 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 890 (1224)
++.+...+..+...++..+..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+..+.......+..++.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (529)
T TIGR02857 159 IFMILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFA 238 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777777777888888999999999999999999999999999999999988888887777777777777766
Q ss_pred HHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCC
Q 047171 891 TASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEIDPEDPKASEDI 970 (1224)
Q Consensus 891 ~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~ 970 (1224)
.+..++++.++++.+..|.++++.++++..+......|+..+...+..+.++..+.+|+.++++.+++... . .. .
T Consensus 239 ~~~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~-~--~~--~ 313 (529)
T TIGR02857 239 TLSVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAG-K--AP--V 313 (529)
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCC-C--cC--C
Confidence 66666666666667778999999999888888888889999999999999999999999999975432111 1 00 1
Q ss_pred CCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHH
Q 047171 971 EEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLR 1050 (1224)
Q Consensus 971 ~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~ 1050 (1224)
+.+..+.|+|+||+|+||++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||.|+++++.+
T Consensus 314 ~~~~~~~i~~~~v~f~y~~~-~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~ 392 (529)
T TIGR02857 314 TAAPAPSLEFSGLSVAYPGR-RAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADAD 392 (529)
T ss_pred CCCCCCeEEEEEEEEECCCC-CcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHH
Confidence 11123579999999999854 34799999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1051 KLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
++|++++||||||++|++||||||.++.++.+|++++++++.+++++++.++|+||||.+||+|.+||||||||++||||
T Consensus 393 ~lr~~i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRa 472 (529)
T TIGR02857 393 SWRDQIAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARA 472 (529)
T ss_pred HHHhheEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHH
Confidence 99999999999999999999999999988889999999999999999999999999999999999999999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEE
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVI 1187 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl 1187 (1224)
++++|+|||||||||+||+++++.+++.+++..+++|+|+||||+++++.||+|+||
T Consensus 473 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 473 FLRDAPLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred HhcCCCEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 999999999999999999999999999999988899999999999999999999986
No 56
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.7e-77 Score=672.34 Aligned_cols=542 Identities=28% Similarity=0.390 Sum_probs=447.4
Q ss_pred hHHHHhhccchh----HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc--CCChH---HHHHHHHHH-----------H
Q 047171 4 KGGLFRYADGKD----KLLLLFGTVGSIGDGMMTPLTMYILSMVINELG--TSDIS---ISIEAVDKV-----------P 63 (1224)
Q Consensus 4 ~~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~--~~~~~---~~~~~~~~~-----------~ 63 (1224)
.+.+..|..++. +..++.++.+.+.+.......|.+++.++|.+. ...+. .....+..+ .
T Consensus 13 ~~~l~~~~~~k~~p~~r~~v~~~l~~l~~aK~l~v~vp~~~~~~id~l~~~~~~~a~~~~~~~~~~~y~iar~~s~~F~e 92 (591)
T KOG0057|consen 13 LRSLVSYKWPKSRPVLRFRVFPALGLLLGAKILNVQVPFIFKLIIDGLNDADGNPAVLSTITALLAGYGIARLGSSVFNE 92 (591)
T ss_pred HHHHHhhheecCCceeeehHHHHHHHHHhhhHhheehHHHHHHHHhhhhhcccCcchhhhhhHHHHHHHHHHHHHHHHHH
Confidence 344555544332 223344444445556777778889999999863 11110 000011111 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHH-H
Q 047171 64 EKGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSI-L 142 (1224)
Q Consensus 64 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~-~ 142 (1224)
++...+.++.+++..+.-.++|.|++.+++++|.+ . .+|++.+.+..-...|..++...+..++..++-+.... .
T Consensus 93 l~~~vfa~v~q~~iR~~~~~vf~~~~~ld~~~~~~---~-~tG~l~~~idRgsraI~~vl~~~V~~i~p~~~~i~~v~~~ 168 (591)
T KOG0057|consen 93 LRNFVFAKVAQRVIRDSSSDVFRHLMSLDLSFFLS---R-GTGALNRIIDRGSRAISFVLSAMVFNIIPTLFEIALVSGI 168 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHhhcC---C-CcchHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56777889999999999999999999999999998 5 99999999999999999999888887777766544433 3
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHH
Q 047171 143 VAFLLSWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNM 222 (1224)
Q Consensus 143 ~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~ 222 (1224)
+..-..+..+++.+..+..+...+.....+-.+..++..++.+.....+.|.+.|..+||+||.|++|.++|+....++.
T Consensus 169 l~~~~Ga~~~li~~~~v~~Y~a~Ti~~t~~Rn~fR~~~N~Adn~as~~~~dsL~Nye~VKsfNnE~~Ea~~y~~~l~~~~ 248 (591)
T KOG0057|consen 169 LYYKFGAAFALITLGTVGAYAAFTIVVTRWRNRFRKAMNNADNSASRRAYDSLINYEIVKSFNNEEYEASRYDGSLKTYE 248 (591)
T ss_pred HHHHhchHHHHHHHHHHHHhheeEEeehhHHHHHHHHHHhhhhHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHH
Confidence 33335666667766666666666666666667778888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 223 ELGIKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRI 301 (1224)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri 301 (1224)
+...+.....++....- .+.....+.+.+.|..-+.++.+|.|+++......+++..|+..+...+..+.++..-++.+
T Consensus 249 ~~~~~~~~sl~~lnfgQ~~iFsv~~~~im~l~~~gi~~~~mtvgdlv~~n~l~~qL~~~l~~Lg~vyr~~~q~l~Dm~~~ 328 (591)
T KOG0057|consen 249 RAGLKYSSSLAFLNFGQKAIFSVALTFIMVLGSNGIAAGKMTVGDLVMVNSLLFQLSLPLNFLGSVYRELRQALTDMRTL 328 (591)
T ss_pred HhhhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhccccccchhhHHHHHHHHHhHHHHHHHHHHHHHHHHHhHHHH
Confidence 98888766666554433 44444555566677777888999999999988888999999999998888888888777776
Q ss_pred HHHhccCCCCCCCcccccccccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCC
Q 047171 302 FEMIDRVPVINSEDEIGKTLAYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPV 370 (1224)
Q Consensus 302 ~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~ 370 (1224)
+...+....+.+ ...+....++.|+|+||+|+|++. ++|++|||||+|||||||++++|.||++ +
T Consensus 329 ~~l~~~~~~i~~---~~~~i~~~~~~I~F~dV~f~y~~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d-~ 404 (591)
T KOG0057|consen 329 FILLEVDEDIQE---AALPIELFGGSIEFDDVHFSYGPKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD-Y 404 (591)
T ss_pred Hhhhhhhhhhhh---ccCCcccCCCcEEEEeeEEEeCCCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc-c
Confidence 655443222211 112333446789999999999754 3677999999999999999999999999 9
Q ss_pred CcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCC
Q 047171 371 KGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQF 450 (1224)
Q Consensus 371 ~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~ 450 (1224)
+|+|+|||+|+++++.+++|+.|||||||..||++||.+||.||+|.+++||+.++|+.+++||.+.++|+||+|.+||+
T Consensus 405 sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFndTIl~NI~YGn~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGer 484 (591)
T KOG0057|consen 405 SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFNDTILYNIKYGNPSASDEEVVEACKRAGLHDVISRLPDGYQTLVGER 484 (591)
T ss_pred CCcEEECCeeHhhhChHHhhhheeEeCCcccccchhHHHHhhcCCCCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEE
Q 047171 451 GVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVI 530 (1224)
Q Consensus 451 g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~ 530 (1224)
|..||||||||||||||++|||||++||||||+||.+||+.+.+.+.+...|||+|+|+||++++++||+|+++++|++.
T Consensus 485 G~~LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~~~~rTvI~IvH~l~ll~~~DkI~~l~nG~v~ 564 (591)
T KOG0057|consen 485 GLMLSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDVMSGRTVIMIVHRLDLLKDFDKIIVLDNGTVK 564 (591)
T ss_pred ccccccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHhcCCCeEEEEEecchhHhcCCEEEEEECCeeE
Confidence 99999999999999999999999999999999999999999999999988999999999999999999999999999999
Q ss_pred eecChHHHHhhccCCCchHHHHHHHHH
Q 047171 531 ESGSHDVLMQMNNGEGGAYSKMVQLQQ 557 (1224)
Q Consensus 531 ~~g~~~~l~~~~~~~~~~y~~~~~~~~ 557 (1224)
|.|+|+||++. .+.|+++|..|.
T Consensus 565 e~gth~ell~~----s~~~~~~w~~~~ 587 (591)
T KOG0057|consen 565 EYGTHSELLAP----SELYADLWTTQT 587 (591)
T ss_pred EeccHHHHhhh----hhHHHHHhcccc
Confidence 99999999996 889999998654
No 57
>TIGR02204 MsbA_rel ABC transporter, permease/ATP-binding protein. This protein is related to a Proteobacterial ATP transporter that exports lipid A and to eukaryotic P-glycoproteins.
Probab=100.00 E-value=1.4e-75 Score=730.23 Aligned_cols=544 Identities=35% Similarity=0.512 Sum_probs=474.7
Q ss_pred hHHHHhhccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-CCChHHHHHHH----H----H---HHHHHHHHHH
Q 047171 4 KGGLFRYADGKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELG-TSDISISIEAV----D----K---VPEKGMCWTR 71 (1224)
Q Consensus 4 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~-~~~~~~~~~~~----~----~---~~~~~~~~~~ 71 (1224)
++.+++|.+++++ .+.+.+++.++.+++....|++++.++|... ..+...+...+ . . .++..++..+
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (576)
T TIGR02204 6 LAALWPFVRPYRG-RVLAALVALLITAAATLSLPYAVRLMIDHGFSKDSSGLLNRYFAFLLVVALVLALGTAARFYLVTW 84 (576)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777765543 4456667777778888888899999999744 22221111100 0 0 0556677788
Q ss_pred HHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHH
Q 047171 72 TAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRL 151 (1224)
Q Consensus 72 ~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (1224)
.+.++..++|..++++++++|.++|++ . ++|++++|+++|++.+++++...+..++.+++.+++.++++++++|.+
T Consensus 85 ~~~~~~~~lr~~l~~~l~~~~~~~~~~---~-~~g~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 160 (576)
T TIGR02204 85 LGERVVADIRRAVFAHLISLSPSFFDK---N-RSGEVVSRLTTDTTLLQSVIGSSLSMALRNALMCIGGLIMMFITSPKL 160 (576)
T ss_pred HHHHHHHHHHHHHHHHHHcCCHHHHcc---C-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 899999999999999999999999998 4 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 152 ALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLT 231 (1224)
Q Consensus 152 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 231 (1224)
++++++.+|+.+++..++.++.++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|++..++..+...+....
T Consensus 161 ~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (576)
T TIGR02204 161 TSLVLLAVPLVLLPILLFGRRVRKLSRESQDRIADAGSYAGETLGAIRTVQAFGHEDAERSRFGGAVEKAYEAARQRIRT 240 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988888888999999999999999999999999999999999999999999999999999888887777776
Q ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC
Q 047171 232 KGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV 310 (1224)
Q Consensus 232 ~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~ 310 (1224)
........ ++..+..++++++|++++.+|.+|+|.++++..+......|+..+...+..++++..+.+|+.++++.+++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~g~~~v~~g~lt~g~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~ri~~~l~~~~~ 320 (576)
T TIGR02204 241 RALLTAIVIVLVFGAIVGVLWVGAHDVIAGKMSAGTLGQFVFYAVMVAGSIGTLSEVWGELQRAAGAAERLIELLQAEPD 320 (576)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 66655554 45556667778899999999999999999999999999999999999999999999999999999986554
Q ss_pred CCCCcccccccccccccEEEEeEEEECCCC-------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEEC
Q 047171 311 INSEDEIGKTLAYLRGEIEFKDVDFSYPTR-------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLD 377 (1224)
Q Consensus 311 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~ 377 (1224)
.+..........+..+.|+++||+|+|++. ++|++++|+|+||||||||+++|+|+|+|++|+|++|
T Consensus 321 ~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~iL~~inl~i~~Ge~i~IvG~sGsGKSTLlklL~gl~~p~~G~I~i~ 400 (576)
T TIGR02204 321 IKAPAHPKTLPVPLRGEIEFEQVNFAYPARPDQPALDGLNLTVRPGETVALVGPSGAGKSTLFQLLLRFYDPQSGRILLD 400 (576)
T ss_pred CCCCCCCccCCcCCCceEEEEEEEEECCCCCCCccccceeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCCCCEEEEC
Confidence 221110001111223579999999999742 2566999999999999999999999999999999999
Q ss_pred CEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChH
Q 047171 378 GHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGG 457 (1224)
Q Consensus 378 g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgG 457 (1224)
|.|+++++.+++|++|+||||+|++|++||+|||.+|+|+.++++++++++.++++++++++|+|+||.+||+|.+||||
T Consensus 401 g~~i~~~~~~~~~~~i~~~~Q~~~lf~~Ti~~Ni~~~~~~~~~~~~~~~l~~~~l~~~i~~l~~gl~t~i~~~g~~LSgG 480 (576)
T TIGR02204 401 GVDLRQLDPAELRARMALVPQDPVLFAASVMENIRYGRPDATDEEVEAAARAAHAHEFISALPEGYDTYLGERGVTLSGG 480 (576)
T ss_pred CEEHHhcCHHHHHHhceEEccCCccccccHHHHHhcCCCCCCHHHHHHHHHHcCcHHHHHhCCCCCCceeCCCCCcCCHH
Confidence 99999999999999999999999999999999999999888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHH
Q 047171 458 QKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDV 537 (1224)
Q Consensus 458 q~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~ 537 (1224)
||||++||||++++|+|||||||||+||+++++.+.+.+++..+++|+|+||||++.++.||+|++|++|++++.|+|++
T Consensus 481 q~Qrl~laRal~~~~~ililDEpts~lD~~~~~~i~~~l~~~~~~~t~IiitH~~~~~~~~d~vi~l~~g~~~~~g~~~~ 560 (576)
T TIGR02204 481 QRQRIAIARAILKDAPILLLDEATSALDAESEQLVQQALETLMKGRTTLIIAHRLATVLKADRIVVMDQGRIVAQGTHAE 560 (576)
T ss_pred HHHHHHHHHHHHhCCCeEEEeCcccccCHHHHHHHHHHHHHHhCCCEEEEEecchHHHHhCCEEEEEECCEEEeeecHHH
Confidence 99999999999999999999999999999999999999999888999999999999999999999999999999999999
Q ss_pred HHhhccCCCchHHHHHHHH
Q 047171 538 LMQMNNGEGGAYSKMVQLQ 556 (1224)
Q Consensus 538 l~~~~~~~~~~y~~~~~~~ 556 (1224)
++++ ++.|+++++.|
T Consensus 561 l~~~----~~~~~~l~~~~ 575 (576)
T TIGR02204 561 LIAK----GGLYARLARLQ 575 (576)
T ss_pred HHHc----CChHHHHHhhc
Confidence 9987 78999988654
No 58
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=6.7e-75 Score=716.05 Aligned_cols=536 Identities=23% Similarity=0.320 Sum_probs=463.4
Q ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 651 KRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVR 730 (1224)
Q Consensus 651 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr 730 (1224)
+.++..+++.++..++....|+++..+++....... ......+.++++++.++..++.+++.++....+.++..++|
T Consensus 6 ~~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr 82 (544)
T TIGR01842 6 STFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGS---VPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALN 82 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCc---hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344555666666677777788888888886542211 11223345556666677788889999999999999999999
Q ss_pred HHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 731 EKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIAD-RMSLLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPLN 809 (1224)
Q Consensus 731 ~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~ 809 (1224)
.+++++++++|+.. .+...+++++|++.+++.+.. .+..++..++.++. ++++++++|.+++++++..|+.
T Consensus 83 ~~~~~~ll~~~~~~-------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~l~li~l~~~~l~ 154 (544)
T TIGR01842 83 QPIFAASFSATLRR-------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPIY-LLVCFLLHPWIGILALGGAVVL 154 (544)
T ss_pred HHHHHHHhcCcccC-------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH-HHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999842 245688899999999988877 45555555555444 4567889999999888888877
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Q 047171 810 IGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFL 889 (1224)
Q Consensus 810 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 889 (1224)
+++.+...+..++..++.++..++..+.+.|.++|+++||+|+.|+.+.++|.+..++..+...+.....+....+..++
T Consensus 155 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (544)
T TIGR01842 155 VGLALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYF 234 (544)
T ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76666666666777777788888899999999999999999999999999999999999888888888888878888888
Q ss_pred HHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCC
Q 047171 890 TTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEIDPEDPKASED 969 (1224)
Q Consensus 890 ~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~ 969 (1224)
..+..++++++|++++..|.+|+|.++++..+......|+..+...+..+..+..+.+|+.++++.+++..+. .
T Consensus 235 ~~~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~---~--- 308 (544)
T TIGR01842 235 RIVLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA---M--- 308 (544)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC---C---
Confidence 8888888899999999999999999999999999899999999999999999999999999999765442211 0
Q ss_pred CCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH
Q 047171 970 IEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL 1049 (1224)
Q Consensus 970 ~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~ 1049 (1224)
..++..+.|+++||+|+|++. +.++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||.|+++++.
T Consensus 309 ~~~~~~~~i~~~~v~~~y~~~-~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~ 387 (544)
T TIGR01842 309 PLPEPEGHLSVENVTIVPPGG-KKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDR 387 (544)
T ss_pred CCCCCCCeEEEEEEEEEcCCC-CccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCH
Confidence 111234579999999999743 3579999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+.+|++++||||||++|++|++|||.++.+++++++++++++.++++++++++|+|+||.+|++|.+|||||||||+|||
T Consensus 388 ~~~~~~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lAR 467 (544)
T TIGR01842 388 ETFGKHIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALAR 467 (544)
T ss_pred HHHhhheEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHH
Confidence 99999999999999999999999999887778999999999999999999999999999999999999999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|++++|+|||||||||+||+++++.+.+.|++.. +++|+|+||||+++++.||+|++|++|+++|.|+|+||+++
T Consensus 468 all~~~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~~ 543 (544)
T TIGR01842 468 ALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLAK 543 (544)
T ss_pred HHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc
Confidence 9999999999999999999999999999999875 68999999999999999999999999999999999999763
No 59
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.1e-75 Score=653.32 Aligned_cols=527 Identities=23% Similarity=0.326 Sum_probs=436.8
Q ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCCh-HHH---HH-----HHHHH-----HHHHHHHHHHHHHHHHHHH
Q 047171 16 KLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSDI-SIS---IE-----AVDKV-----PEKGMCWTRTAERQASRIR 81 (1224)
Q Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~-~~~---~~-----~~~~~-----~~~~~~~~~~~~~~~~~lR 81 (1224)
+..+.++++++++..+....+..+-|++|..-.-... ..+ .. .+... |.-.+..+....++..++|
T Consensus 15 ~~~l~Lgi~l~~~t~lasigLl~lSGwfisasAiag~~~~f~~~~p~a~VR~~aI~Rt~~RY~ERlvsH~AtfrvL~~lR 94 (573)
T COG4987 15 KFGLLLGIVLAILTLLASIGLLTLSGWFISASAIAGLAYIFNVMLPSAGVRGLAILRTAARYVERLVSHDATFRVLSALR 94 (573)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 3455667777666665555555566777765211111 111 10 00000 6667778888999999999
Q ss_pred HHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH-HHH
Q 047171 82 MEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALP-FSL 160 (1224)
Q Consensus 82 ~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~-~~~ 160 (1224)
.++|+++...+..-..+ .++||+++|+..|++.+++.+-..+...+..+..+.+..+.+-++||.+++.... .+.
T Consensus 95 v~~f~kl~p~sp~~~~r----~r~gdLL~RLvaDVd~Ld~lyLRvi~P~~~a~~~~~~~~i~L~f~~~~~Alll~~~ll~ 170 (573)
T COG4987 95 VRLFEKLEPLSPALLLR----YRSGDLLNRLVADVDALDNLYLRVIAPAVVALVLIAVVTIGLSFFSIPLALLLGLILLL 170 (573)
T ss_pred HHHHHhhccCChHHHHh----cChHhHHHHHHhhHHHHhhHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 99999999999999998 4999999999999999999999999999999888888888888899998865544 444
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Q 047171 161 LFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSM- 239 (1224)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (1224)
+++++...+.++-++..++..+..+...+.+.|.+.|....+.||+++.+.+.+........+...|...+.++...+.
T Consensus 171 ~lli~P~~~~~~~~~~~~~l~~~r~~lr~~~td~v~G~~EL~~~g~~~~~~~~l~~~e~~~~~~q~k~~~~~~~~~a~~~ 250 (573)
T COG4987 171 LLLIIPTLFYRAGRKFGAHLAQGRAALRSQFTDWVQGQAELLIFGAEDAYRTALEATEASWLKAQRKQARFTGLSDAILL 250 (573)
T ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhhHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5566677788888888889999999999999999999999999999999999999999998888888888888877666
Q ss_pred HHHHHHHH-HHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCCCCCccc
Q 047171 240 GMTYGAWA-FQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSAL-PNLSFISQATTAATRIFEMIDRVPVINSEDEI 317 (1224)
Q Consensus 240 ~~~~~~~~-~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~ 317 (1224)
++..+..+ .++|.++ .+-.|..+......+++.++....++..+. ..+....+...|++|+.++++.+|+...+++
T Consensus 251 l~~g~~v~~~l~w~a~-~~~~G~~~~~~aa~~ll~~f~~~eaf~~L~~~A~~~lgq~~~Sa~Rl~~i~~q~~e~~~~~~- 328 (573)
T COG4987 251 LIAGLLVIGLLLWMAA-QVGAGALAQPGAALALLVIFAALEAFEPLAPGAFQHLGQVIASARRLNDILDQKPEVTFPDE- 328 (573)
T ss_pred HHHHHHHHHHHHHHHh-cCcCCCcchhHHHHHHHHHHHHHHHHhhhcchhHHHhhHHHHHHHHHhhhccCCcccCCCcc-
Confidence 44333333 4455543 344455553333333333333334444444 5568899999999999999998887554311
Q ss_pred ccccccccccEEEEeEEEECCCCC------------CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCC
Q 047171 318 GKTLAYLRGEIEFKDVDFSYPTRP------------DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQ 385 (1224)
Q Consensus 318 ~~~~~~~~~~i~~~~v~f~y~~~~------------~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~ 385 (1224)
..+.. ...++++||||+||+.+ +|+++||+|+|||||||++++|.|.|+|++|+|.++|.++..++
T Consensus 329 -~~~~~-~~~l~~~~vsF~y~~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~~G~i~~~g~~~~~l~ 406 (573)
T COG4987 329 -QTATT-GQALELRNVSFTYPGQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQQGSITLNGVEIASLD 406 (573)
T ss_pred -ccCCc-cceeeeccceeecCCCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCCCCeeeECCcChhhCC
Confidence 11111 12799999999998653 56799999999999999999999999999999999999999999
Q ss_pred HHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHH
Q 047171 386 LKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIA 465 (1224)
Q Consensus 386 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiA 465 (1224)
.+.+|+.|++++|.++||++|+|||+++++|++++|++++++++++++++++..|+||+|.+||.|..||||||||+|||
T Consensus 407 ~~~~~e~i~vl~Qr~hlF~~Tlr~NL~lA~~~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge~G~~LSGGE~rRLAlA 486 (573)
T COG4987 407 EQALRETISVLTQRVHLFSGTLRDNLRLANPDASDEELWAALQQVGLEKLLESAPDGLNTWLGEGGRRLSGGERRRLALA 486 (573)
T ss_pred hhhHHHHHhhhccchHHHHHHHHHHHhhcCCCCCHHHHHHHHHHcCHHHHHHhChhhhhchhccCCCcCCchHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCC
Q 047171 466 RALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGE 545 (1224)
Q Consensus 466 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~ 545 (1224)
|+|++|+|++||||||.+||++||+.+.+.+.+..+|||+|+||||+..++.+|||+||++|+++|+|+|++|+++
T Consensus 487 R~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~~kTll~vTHrL~~le~~drIivl~~Gkiie~G~~~~Ll~~---- 562 (573)
T COG4987 487 RALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAEGKTLLMVTHRLRGLERMDRIIVLDNGKIIEEGTHAELLAN---- 562 (573)
T ss_pred HHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhcCCeEEEEecccccHhhcCEEEEEECCeeeecCCHHhhhcc----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CchHHHHHH
Q 047171 546 GGAYSKMVQ 554 (1224)
Q Consensus 546 ~~~y~~~~~ 554 (1224)
+|.|+++++
T Consensus 563 ~g~~~~l~q 571 (573)
T COG4987 563 NGRYKRLYQ 571 (573)
T ss_pred ccHHHHHhc
Confidence 899998875
No 60
>COG5265 ATM1 ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=8.2e-77 Score=647.65 Aligned_cols=479 Identities=31% Similarity=0.434 Sum_probs=422.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHH
Q 047171 67 MCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFI-GSILVAF 145 (1224)
Q Consensus 67 ~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~-~~~~~~~ 145 (1224)
.++...++.....+--+.|.|+.++++.|+-+ + .+|.+...+....+.|+..+...+...+..++-+. .++++..
T Consensus 4 ~~fs~v~q~a~r~la~~~F~h~~~Lsl~fHl~---r-~TGglsR~ierGtkgI~~i~~~~l~~i~P~~~Ei~l~~vi~~~ 79 (497)
T COG5265 4 RLFSPVGQIAVRVLAYVTFFHLHSLSLRFHLE---R-RTGGLSRAIERGTKGIETILRWILFNILPTLVEISLVAVILWR 79 (497)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhcchhhhhh---c-ccCceeeHhhcCcccHHHHHHHHHHHhhHHHHHHHHHHHHHHh
Confidence 45677788888888899999999999999998 5 88888777777777777777666666666655443 3445566
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHH
Q 047171 146 LLSWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELG 225 (1224)
Q Consensus 146 ~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~ 225 (1224)
.++|+.++++++.+.++.++.......-....++..++.+++++...+++-+..+||.|+.|+.+..+|++.++.+.+..
T Consensus 80 ~~~~~f~~~t~vtv~lY~~ftv~~s~wr~~~rr~~n~aDs~a~~~aidsLlnfEtvk~F~ne~~e~~r~~~~~~~Y~~a~ 159 (497)
T COG5265 80 VYGWWFALTTLVTVILYLLFTVIVSDWRTDFRRLMNNADSDANAKAIDSLLNFETVKYFGNEEYEAVRYDHALETYEKAA 159 (497)
T ss_pred hcccHHHHHHHHHHHHHHHhheeehhhhHHHHHhhhhhhhHHHHHHHHHHhhhhheeecCchhhhhhhcCchHHHHHHHH
Confidence 68999999999888888777666555555566778888999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 226 IKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEM 304 (1224)
Q Consensus 226 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~ 304 (1224)
.|.....+++...- .+.......+...+...+..|.+|.|+++....++++.+.|+..++..+..+.+++.-.++++++
T Consensus 160 ~k~~~Sl~~Ln~gQ~~I~~~~l~~~m~~s~~~v~~g~~TvgD~V~~Nall~qls~Plnflg~~Yrei~q~ltdme~mfdL 239 (497)
T COG5265 160 IKVHVSLLVLNFGQTAIFSTGLRVMMTMSALGVEEGQLTVGDLVNVNALLFQLSIPLNFLGFSYREIRQALTDMEKMFDL 239 (497)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHhhcHHHHhhccCCchhHHhHHHHHhhhhhhhhhhHHHHHHHHHhhhhHHHHHHh
Confidence 88665555544333 44455556666778888899999999999999999999999999999999999999999999999
Q ss_pred hccCCCCCCCcccccccc-cccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCc
Q 047171 305 IDRVPVINSEDEIGKTLA-YLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKG 372 (1224)
Q Consensus 305 l~~~~~~~~~~~~~~~~~-~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G 372 (1224)
++.+.++.+.+ +.++.. ...|.|.|+||+|.|.++ +.++++|+|||||+||||++++|.||||+++|
T Consensus 240 l~~~~~v~d~p-da~~L~~~~~g~v~F~~V~F~y~~~r~iL~~isf~i~~g~tvAiVg~SG~gKsTI~rllfRFyD~~sG 318 (497)
T COG5265 240 LDVEAEVSDAP-DAPPLWPVRLGAVAFINVSFAYDPRRPILNGISFTIPLGKTVAIVGESGAGKSTILRLLFRFYDVNSG 318 (497)
T ss_pred hccchhhccCC-CCccccccccceEEEEEEEeeccccchhhcCccccccCccEEEEEeCCCCcHHHHHHHHHHHhCCcCc
Confidence 99877655432 222222 345789999999999653 35679999999999999999999999999999
Q ss_pred EEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCC
Q 047171 373 NILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGV 452 (1224)
Q Consensus 373 ~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~ 452 (1224)
.|.+||+|+++...+++|+.||+||||..||++|+..||.||+|+++++|+..+++.+++|+||+.+|+||+|.|||+|-
T Consensus 319 ~I~id~qdir~vtq~slR~aIg~VPQDtvLFNDti~yni~ygr~~at~eev~aaa~~aqi~~fi~~lP~gy~t~Vgergl 398 (497)
T COG5265 319 SITIDGQDIRDVTQQSLRRAIGIVPQDTVLFNDTIAYNIKYGRPDATAEEVGAAAEAAQIHDFIQSLPEGYDTGVGERGL 398 (497)
T ss_pred eEEEcchhHHHhHHHHHHHHhCcCcccceehhhhHHHHHhccCccccHHHHHHHHHHhhhhHHHHhCchhhhcccchhee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEee
Q 047171 453 QLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIES 532 (1224)
Q Consensus 453 ~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~ 532 (1224)
.|||||||||||||+++++|+||+|||+|||||.+||+.||.+|++..+|+|+++|+|||+|+-+||.|+||++|+|+|.
T Consensus 399 klSggekqrvaiar~ilk~p~il~~deatsaldt~te~~iq~~l~~~~~~rttlviahrlsti~~adeiivl~~g~i~er 478 (497)
T COG5265 399 KLSGGEKQRVAIARTILKNPPILILDEATSALDTHTEQAIQAALREVSAGRTTLVIAHRLSTIIDADEIIVLDNGRIVER 478 (497)
T ss_pred eccCchHHHHHHHHHHhcCCCEEEEehhhhHhhhhHHHHHHHHHHHHhCCCeEEEEeehhhhccCCceEEEeeCCEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cChHHHHhhccCCCchHHHHHH
Q 047171 533 GSHDVLMQMNNGEGGAYSKMVQ 554 (1224)
Q Consensus 533 g~~~~l~~~~~~~~~~y~~~~~ 554 (1224)
|+|+||++. +|.|++||.
T Consensus 479 g~h~~ll~~----~g~ya~mw~ 496 (497)
T COG5265 479 GTHEELLAA----GGLYAEMWR 496 (497)
T ss_pred CcHHHHHHc----CChHHHHhc
Confidence 999999998 999999985
No 61
>TIGR02857 CydD thiol reductant ABC exporter, CydD subunit. Unfortunately, the gene symbol nomenclature adopted based on this operon in B. subtilis assigns cydC to the third gene in the operon where this gene is actually homologous to the E. coli cydD gene. We have chosen to name all homologs in this family in accordance with the precedence of publication of the E. coli name, CydD
Probab=100.00 E-value=2.1e-74 Score=711.06 Aligned_cols=499 Identities=24% Similarity=0.300 Sum_probs=438.2
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhhc-CC-ChHHHHHHH----H----H---HHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 19 LLFGTVGSIGDGMMTPLTMYILSMVINELG-TS-DISISIEAV----D----K---VPEKGMCWTRTAERQASRIRMEYL 85 (1224)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~id~~~-~~-~~~~~~~~~----~----~---~~~~~~~~~~~~~~~~~~lR~~~~ 85 (1224)
++++++++++.+++.+..|+++++++|.+. .. +...+...+ . . .++..++..+.+.++..++|.++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~iid~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~l~ 84 (529)
T TIGR02857 5 LALLGLLGALGALLIIAQAWLLARVIDGLISAGEPLAELLPALGALALAVLLRALLGWLGERAAARAAAAVKSQLRERLL 84 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677777888888888999999999873 32 212111110 0 0 056677788899999999999999
Q ss_pred HHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 047171 86 KSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALPFSLLFIVP 165 (1224)
Q Consensus 86 ~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~ 165 (1224)
+|++++|..+|++ . ++|++++|+++|++.+++.+...+..++.+++.+++.++++++++|.+++++++.+|+..++
T Consensus 85 ~~l~~~~~~~~~~---~-~~g~~~~~l~~di~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~l~~~~l~~~~ 160 (529)
T TIGR02857 85 AAVAALGPGWLQG---R-PSGELATLALEGVEALDGYFARYLPQLVLAVIIPLAILAAVFPADWISGLILLLTAPLIPIF 160 (529)
T ss_pred HHHHhCCchhhcc---C-ChHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 9999999999998 5 99999999999999999999999999999999999999999999999999999999988888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Q 047171 166 GIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSM-GMTYG 244 (1224)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (1224)
..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+.......+. ++..+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (529)
T TIGR02857 161 MILIGWAAQAAARKQWAALSRLSGHFLDRLRGLPTLKLFGRAKAQAAAIARSSEEYRERTMRVLRIAFLSSAVLELFATL 240 (529)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888999889999999999999999999999999999999999999999999999888888777766655555 44444
Q ss_pred HHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCcccccccccc
Q 047171 245 AWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAYL 324 (1224)
Q Consensus 245 ~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~ 324 (1224)
..+++++++++.+.+|.+|+|.++++..+......|+..+...+..++++..+++|+.++++.+++..+.. ... ...
T Consensus 241 ~~~~~~~~~~~~~~~g~~t~g~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~ll~~~~~~~~~~--~~~-~~~ 317 (529)
T TIGR02857 241 SVALVAVYIGFRLLAGDLDLATGLFVLLLAPEFYLPLRQLGADYHARADGVAAAEALFAVLDAPRPLAGKA--PVT-AAP 317 (529)
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccCCCc--CCC-CCC
Confidence 55555566777777999999999999999999999999999999999999999999999998543221111 111 112
Q ss_pred cccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcc
Q 047171 325 RGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQ 392 (1224)
Q Consensus 325 ~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~ 392 (1224)
.+.|+++||+|+|++. ++|+++|||||||||||||+++|+|+|+|++|+|.+||+|+++++.+++|++
T Consensus 318 ~~~i~~~~v~f~y~~~~~~il~~i~l~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~I~~~g~~i~~~~~~~lr~~ 397 (529)
T TIGR02857 318 APSLEFSGLSVAYPGRRAPALRPVSFTVPPGERVALVGPSGAGKSTLLNLLLGFVDPTEGSIAVNGVPLADADADSWRDQ 397 (529)
T ss_pred CCeEEEEEEEEECCCCCcccccceeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEehhhCCHHHHHhh
Confidence 3579999999999753 2567999999999999999999999999999999999999999999999999
Q ss_pred cEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 047171 393 MGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDP 472 (1224)
Q Consensus 393 i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~ 472 (1224)
|+||+|+|++|++||+|||.++.+++++++++++++.++++++++++|+||||.+||+|.+||||||||++||||++++|
T Consensus 398 i~~v~Q~~~lf~~ti~~Ni~~~~~~~~~~~i~~a~~~~~l~~~i~~lp~Gldt~v~e~g~~LSgGq~qri~laRal~~~~ 477 (529)
T TIGR02857 398 IAWVPQHPFLFAGTIAENIRLARPDASDAEIRRALERAGLDEFVAALPQGLDTLIGEGGAGLSGGQAQRLALARAFLRDA 477 (529)
T ss_pred eEEEcCCCcccCcCHHHHHhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhccccccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEE
Q 047171 473 KILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVL 524 (1224)
Q Consensus 473 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl 524 (1224)
+|+|||||||+||+++++.+.+.+.+..+++|+|+||||+++++.||+|++|
T Consensus 478 ~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~itH~~~~~~~~d~i~~l 529 (529)
T TIGR02857 478 PLLLLDEPTAHLDAETEALVTEALRALAQGRTVLLVTHRLALAERADRIVVL 529 (529)
T ss_pred CEEEEeCcccccCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEeC
Confidence 9999999999999999999999999988899999999999999999999986
No 62
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=9.6e-74 Score=768.80 Aligned_cols=481 Identities=23% Similarity=0.300 Sum_probs=420.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 047171 63 PEKGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSIL 142 (1224)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 142 (1224)
++..++..+.+.+...++|.++++++++.|++||++ . ++|++++|+++|++.+++.+...+..++..++.+++.++
T Consensus 1023 ~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~---~-~~G~ilnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~li 1098 (1522)
T TIGR00957 1023 FGYSMAVSIGGIQASRVLHQDLLHNKLRSPMSFFER---T-PSGNLVNRFSKELDTVDSMIPPVIKMFMGSLFNVIGALI 1098 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhHhcc---C-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455667778899999999999999999999999998 5 999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHH
Q 047171 143 VAFLLSWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNM 222 (1224)
Q Consensus 143 ~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~ 222 (1224)
++++.+|.+++++++++++++++..++.+..+...+...+..+.+.+.+.|+++|+++||+|++|+.+.+++.+..+...
T Consensus 1099 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~l~~~~~E~l~Gi~tIraf~~~~~f~~~~~~~~~~~~ 1178 (1522)
T TIGR00957 1099 VILLATPIAAVIIPPLGLLYFFVQRFYVASSRQLKRLESVSRSPVYSHFNETLLGVSVIRAFEEQERFIHQSDLKVDENQ 1178 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCcHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 99999998877777767777777777777777777778888899999999999999999999999999999988888777
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-hcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 223 ELGIKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVT-ERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATR 300 (1224)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~r 300 (1224)
+..........+..... .+. .++++++|++.+. .|.+++|.+.+++.|+.....|+..+...+..++++.+|++|
T Consensus 1179 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~g~l~~~l~~~~~~~~~l~~l~~~~~~~e~~~~s~eR 1255 (1522)
T TIGR00957 1179 KAYYPSIVANRWLAVRLECVG---NCIVLFAALFAVISRHSLSAGLVGLSVSYSLQVTFYLNWLVRMSSEMETNIVAVER 1255 (1522)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76655544444444333 222 2233444555554 578999999999999999999999999999999999999999
Q ss_pred HHHHhccCCCCCCCcccccccc--cccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcC
Q 047171 301 IFEMIDRVPVINSEDEIGKTLA--YLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERF 366 (1224)
Q Consensus 301 i~~~l~~~~~~~~~~~~~~~~~--~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~ 366 (1224)
+.++++.+++.+...+...+++ +.+|+|+|+||+|+|+++ ++|+++||||+||||||||+++|.|+
T Consensus 1256 i~~~~~~~~e~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl 1335 (1522)
T TIGR00957 1256 LKEYSETEKEAPWQIQETAPPSGWPPRGRVEFRNYCLRYREDLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRI 1335 (1522)
T ss_pred HHHHhcCCCCccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcC
Confidence 9999987655321111111111 345889999999999753 25679999999999999999999999
Q ss_pred CCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhcccccccc
Q 047171 367 YDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETK 446 (1224)
Q Consensus 367 ~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~ 446 (1224)
|+|++|+|++||+|+++++.+++|++|++|||||+||+|||||||.... +++++++++|++.+++++++.++|+||||.
T Consensus 1336 ~~~~~G~I~IdG~dI~~i~~~~LR~~i~iVpQdp~LF~gTIr~NLdp~~-~~sdeei~~al~~a~l~~~I~~lp~GLdt~ 1414 (1522)
T TIGR00957 1336 NESAEGEIIIDGLNIAKIGLHDLRFKITIIPQDPVLFSGSLRMNLDPFS-QYSDEEVWWALELAHLKTFVSALPDKLDHE 1414 (1522)
T ss_pred ccCCCCeEEECCEEccccCHHHHHhcCeEECCCCcccCccHHHHcCccc-CCCHHHHHHHHHHcCcHHHHhhCccCCCce
Confidence 9999999999999999999999999999999999999999999998332 589999999999999999999999999999
Q ss_pred ccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeC
Q 047171 447 VGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQS 526 (1224)
Q Consensus 447 ~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~ 526 (1224)
+||+|.+||||||||+||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||++++.+||+|+||++
T Consensus 1415 v~e~G~~LSgGQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~~~~TvI~IAHRl~ti~~~DrIlVld~ 1494 (1522)
T TIGR00957 1415 CAEGGENLSVGQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQFEDCTVLTIAHRLNTIMDYTRVIVLDK 1494 (1522)
T ss_pred ecCCCCcCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999999999998899999999999999999999999999
Q ss_pred ceEEeecChHHHHhhccCCCchHHHHHHH
Q 047171 527 GRVIESGSHDVLMQMNNGEGGAYSKMVQL 555 (1224)
Q Consensus 527 G~i~~~g~~~~l~~~~~~~~~~y~~~~~~ 555 (1224)
|+|+|.|+|+||+++ ++.|+++++.
T Consensus 1495 G~IvE~G~~~eLl~~----~~~f~~l~~~ 1519 (1522)
T TIGR00957 1495 GEVAEFGAPSNLLQQ----RGIFYSMAKD 1519 (1522)
T ss_pred CEEEEECCHHHHHhC----CCHHHHHHHH
Confidence 999999999999987 7899999875
No 63
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=5.9e-73 Score=698.73 Aligned_cols=509 Identities=23% Similarity=0.296 Sum_probs=438.2
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcC-CChHHHHHHH----HH-------HHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 18 LLLFGTVGSIGDGMMTPLTMYILSMVINELGT-SDISISIEAV----DK-------VPEKGMCWTRTAERQASRIRMEYL 85 (1224)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~-~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~lR~~~~ 85 (1224)
.+++.++++++..++....|+++++++|.+.. .+...+...+ .. .++..++..+.+.++..++|.++|
T Consensus 7 ~~~~~~~~~~~~~~~~l~~p~~~~~iid~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~ 86 (544)
T TIGR01842 7 TFIIVGLFSFVINILMLAPPLYMLQVYDRVLTSGSVPTLLMLTVLALGLYLFLGLLDALRSFVLVRIGEKLDGALNQPIF 86 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556666666677777788899999997642 2222221110 00 055677788889999999999999
Q ss_pred HHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q 047171 86 KSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAE-KIPNCLAHLTSFIGSILVAFLLSWRLALAALPFSLLFIV 164 (1224)
Q Consensus 86 ~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~ 164 (1224)
+|++++|+.. .+...+++++|++.+++.+.. .+..++..++.++ .++++++++|++++++++.+|++++
T Consensus 87 ~~ll~~~~~~---------~~~~~~~~~~d~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~l~li~l~~~~l~~~ 156 (544)
T TIGR01842 87 AASFSATLRR---------GKIDGLQALRDLDQLRQFLTGPGLFAFFDAPWMPI-YLLVCFLLHPWIGILALGGAVVLVG 156 (544)
T ss_pred HHHhcCcccC---------ccchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH-HHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 9999999832 235678899999999998877 4455555555444 4567899999999999888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH
Q 047171 165 PGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSM-GMTY 243 (1224)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 243 (1224)
+..++.++.++..++.++..++.++.+.|.++|+++||+|+.|+.+.++|++..++..+...+..+..+....+. .+..
T Consensus 157 i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~ik~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (544)
T TIGR01842 157 LALLNNRATKKPLKEATEASIRANNLADSALRNAEVIEAMGMMGNLTKRWGRFHSKYLSAQSAASDRAGMLSNLSKYFRI 236 (544)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHhcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 878888888888899999999999999999999999999999999999999999999888888877777766655 5555
Q ss_pred HHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccc
Q 047171 244 GAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAY 323 (1224)
Q Consensus 244 ~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~ 323 (1224)
+..++++++|++++.+|.+|+|.++++..++.....|+..+...+..++++..+.+|+.++++.+++.++. ...+.
T Consensus 237 ~~~~~~~~~g~~l~~~g~it~g~l~a~~~~~~~~~~pl~~l~~~~~~~~~~~~~~~ri~~~l~~~~~~~~~----~~~~~ 312 (544)
T TIGR01842 237 VLQSLVLGLGAYLAIDGEITPGMMIAGSILVGRALAPIDGAIGGWKQFSGARQAYKRLNELLANYPSRDPA----MPLPE 312 (544)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCC----CCCCC
Confidence 66677888999999999999999999999999999999999999999999999999999999865543211 11122
Q ss_pred ccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhc
Q 047171 324 LRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRS 391 (1224)
Q Consensus 324 ~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~ 391 (1224)
..+.|+++||+|+|++. ++|+++|||||||||||||+++|+|+|+|++|+|.+||+++++++.+++|+
T Consensus 313 ~~~~i~~~~v~~~y~~~~~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~i~~~~~~~~~~ 392 (544)
T TIGR01842 313 PEGHLSVENVTIVPPGGKKPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPTSGSVRLDGADLKQWDRETFGK 392 (544)
T ss_pred CCCeEEEEEEEEEcCCCCccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEehhhCCHHHHhh
Confidence 34679999999999642 256799999999999999999999999999999999999999999999999
Q ss_pred ccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccC
Q 047171 392 QMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRD 471 (1224)
Q Consensus 392 ~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~ 471 (1224)
+++||+|+|++|++|++|||+++.+++++++++++++.++++++++++|+|+||.+||+|.+||||||||++||||++++
T Consensus 393 ~i~~v~q~~~lf~~ti~~Ni~~~~~~~~~~~~~~~~~~~~~~~~i~~l~~gl~t~~~~~g~~LSgGq~qrl~lARall~~ 472 (544)
T TIGR01842 393 HIGYLPQDVELFPGTVAENIARFGENADPEKIIEAAKLAGVHELILRLPDGYDTVIGPGGATLSGGQRQRIALARALYGD 472 (544)
T ss_pred heEEecCCcccccccHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCccccccccCCCcCCCCHHHHHHHHHHHHHhcC
Confidence 99999999999999999999988777899999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHh
Q 047171 472 PKILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 472 ~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
|++||||||||+||+++++.+.+.+.+.. +++|+|+||||++.++.||+|++|++|++++.|+|+|+++
T Consensus 473 ~~ililDEpts~LD~~~~~~i~~~l~~~~~~~~tvi~ith~~~~~~~~d~i~~l~~G~i~~~g~~~~l~~ 542 (544)
T TIGR01842 473 PKLVVLDEPNSNLDEEGEQALANAIKALKARGITVVVITHRPSLLGCVDKILVLQDGRIARFGERDEVLA 542 (544)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHhhCCCEEEEEeCCHHHHHhCCEEEEEECCEEEeeCCHHHHhh
Confidence 99999999999999999999999998875 6899999999999999999999999999999999999975
No 64
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=2.1e-72 Score=753.60 Aligned_cols=484 Identities=24% Similarity=0.306 Sum_probs=385.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 047171 63 PEKGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSIL 142 (1224)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 142 (1224)
+++.++..+.+.+...++|.+++++++++|++|||+ + ++|++++|+++|++.+++.+...+..++..++.+++.++
T Consensus 971 ~~~~~~~~~~~~~~~~~L~~~l~~~ll~~p~~ffd~---~-~~G~IlnR~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i 1046 (1622)
T PLN03130 971 LLNSYWLIMSSLYAAKRLHDAMLGSILRAPMSFFHT---N-PLGRIINRFAKDLGDIDRNVAVFVNMFLGQIFQLLSTFV 1046 (1622)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhcc---C-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677788899999999999999999999999998 5 999999999999999999999999999999999999888
Q ss_pred HHHHHhHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHH
Q 047171 143 VAFLLSWRLALAALPFSLLF-IVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKN 221 (1224)
Q Consensus 143 ~~~~~~~~l~l~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~ 221 (1224)
++++++|.. ++.+++++++ +.+..++.+..++..+......+.+.+.+.|+++|+++||+|++++.+.+++.+..+..
T Consensus 1047 ~i~~~~~~~-~~~~~pl~~~~~~~~~~~~~~~r~~~r~~~~~~s~~~~~~~Etl~Gi~tIraf~~~~~f~~~~~~~~~~~ 1125 (1622)
T PLN03130 1047 LIGIVSTIS-LWAIMPLLVLFYGAYLYYQSTAREVKRLDSITRSPVYAQFGEALNGLSTIRAYKAYDRMAEINGRSMDNN 1125 (1622)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHhCCHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 888888743 3333333332 22333444555666666667778899999999999999999999887666655554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-cc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 222 MELGIKQGLTKGLLLGSMGMTYGAWAFQSWVGSVLVTERG-EK-----GGLVFVAGICTILGGVGIMSALPNLSFISQAT 295 (1224)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1224)
.+..........+..... ..+..+++++.|.+.+..+. .. .+.+-.++.|+.....++..+...+..++++.
T Consensus 1126 ~~~~~~~~~~~~wl~~~l--~~~~~~~i~~~~~~~v~~~~~~~~~~~~~~~~G~~ls~~~~~~~~l~~l~~~~~~~e~~~ 1203 (1622)
T PLN03130 1126 IRFTLVNMSSNRWLAIRL--ETLGGLMIWLTASFAVMQNGRAENQAAFASTMGLLLSYALNITSLLTAVLRLASLAENSL 1203 (1622)
T ss_pred HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHcccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332222111111111111 11112222223333344332 11 12222233344455556666666777889999
Q ss_pred HHHHHHHHHhccCCCCCCCccccccc--ccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHH
Q 047171 296 TAATRIFEMIDRVPVINSEDEIGKTL--AYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVIS 361 (1224)
Q Consensus 296 ~s~~ri~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ 361 (1224)
+|.+|+.++++.+++.+...+...++ .+.+|.|+|+||+|+|++. ++|+++||||+||||||||++
T Consensus 1204 ~sveRi~e~~~~~~E~~~~~~~~~~~~~wp~~g~I~f~nVsf~Y~~~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~ 1283 (1622)
T PLN03130 1204 NAVERVGTYIDLPSEAPLVIENNRPPPGWPSSGSIKFEDVVLRYRPELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLN 1283 (1622)
T ss_pred HHHHHHHHHhCCCCcccccccCCCCCCCCCCCCcEEEEEEEEEeCCCCCceecceeEEEcCCCEEEEECCCCCCHHHHHH
Confidence 99999999998766532211111111 1345789999999999642 256799999999999999999
Q ss_pred HHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccc
Q 047171 362 LLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLND 441 (1224)
Q Consensus 362 ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~ 441 (1224)
+|.|+|+|++|+|+|||+|+++++.+++|++|++|||||.||+|||||||.+++ +++++++++|++.+++++++.++|+
T Consensus 1284 lL~rl~~p~~G~I~IDG~dI~~i~l~~LR~~IsiVpQdp~LF~GTIreNLd~~~-~~tdeei~~Al~~a~l~~~I~~lp~ 1362 (1622)
T PLN03130 1284 ALFRIVELERGRILIDGCDISKFGLMDLRKVLGIIPQAPVLFSGTVRFNLDPFN-EHNDADLWESLERAHLKDVIRRNSL 1362 (1622)
T ss_pred HHhCcCCCCCceEEECCEecccCCHHHHHhccEEECCCCccccccHHHHhCcCC-CCCHHHHHHHHHHcCcHHHHHhCcc
Confidence 999999999999999999999999999999999999999999999999999987 4789999999999999999999999
Q ss_pred cccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEE
Q 047171 442 GYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLI 521 (1224)
Q Consensus 442 g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i 521 (1224)
||||.+||+|.+|||||||||||||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++.+||+|
T Consensus 1363 GLdt~Vge~G~nLSgGQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~~~~TvI~IAHRL~tI~~~DrI 1442 (1622)
T PLN03130 1363 GLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRI 1442 (1622)
T ss_pred ccCccccCCCCCCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEEEeCChHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999999999999998999999999999999999999
Q ss_pred EEEeCceEEeecChHHHHhhccCCCchHHHHHHHHH
Q 047171 522 GVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQ 557 (1224)
Q Consensus 522 ~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~ 557 (1224)
+||++|+|+|.|+|+||++++ ++.|+++++.+.
T Consensus 1443 lVLd~G~IvE~Gt~~eLl~~~---~g~f~~L~~~~~ 1475 (1622)
T PLN03130 1443 LVLDAGRVVEFDTPENLLSNE---GSAFSKMVQSTG 1475 (1622)
T ss_pred EEEECCEEEEeCCHHHHHhCC---CCHHHHHHHHcC
Confidence 999999999999999999862 589999987654
No 65
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=1.2e-73 Score=661.24 Aligned_cols=467 Identities=27% Similarity=0.443 Sum_probs=354.0
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCC----CcEEEECCEecCCCCHHHHh----cccEEecCC
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPV----KGNILLDGHKIKKLQLKWLR----SQMGLVNQE 399 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~----~G~i~~~g~~~~~~~~~~~r----~~i~~v~Q~ 399 (1224)
..++||||.- .+|+++||||+|||||||+++.|.|+.++. +|+|.++|.|+..++.+..| +.|+||||+
T Consensus 23 ~~v~~vsf~v---~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~ 99 (539)
T COG1123 23 PAVRDVSFEV---EPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQD 99 (539)
T ss_pred eeeecceEEe---cCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecC
Confidence 3567777765 357899999999999999999999999987 89999999999988876553 479999999
Q ss_pred CC-CCcc--cHHHHHh----cCCCCCCHHHHHHHHHHhcHHHHHHhccccccccc--cCCCCCCChHHHHHHHHHHHhcc
Q 047171 400 PI-LFST--SIKENIL----IGKPGASMETVVKAAQAANVHDFIMKLNDGYETKV--GQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 400 ~~-lf~~--ti~~ni~----~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~--~~~g~~LSgGq~qriaiARal~~ 470 (1224)
|+ .+|. ||.+-|. ...+ .+.++. ...+.+.++.. |+.... ...+++||||||||+.||+||+.
T Consensus 100 p~~slnP~~tIg~Qi~E~~~~h~~-~~~~ea-----~~~a~elL~~V--gl~~~~~~~~yPheLSGG~rQRv~iAmALa~ 171 (539)
T COG1123 100 PMTSLNPVMTIGDQIREALRLHGK-GSRAEA-----RKRAVELLEQV--GLPDPERRDRYPHQLSGGMRQRVMIAMALAL 171 (539)
T ss_pred chhhcCchhhHHHHHHHHHHHhcc-ccHHHH-----HHHHHHHHHHc--CCCChhhhccCCcccCchHHHHHHHHHHHhC
Confidence 95 4543 5555543 2221 111111 11223444433 332222 56899999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCc
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGG 547 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 547 (1224)
+|++||+||||++||+.++..|.+.|+++. .|.++|+|||++..+.+ ||||+||++|+++|.|+.++++++. ..
T Consensus 172 ~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE~G~~~~i~~~p---~h 248 (539)
T COG1123 172 KPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVETGPTEEILSNP---QH 248 (539)
T ss_pred CCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEEecCHHHHHhcc---CC
Confidence 999999999999999999999999999875 68999999999999987 9999999999999999999998752 11
Q ss_pred hHHHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCc
Q 047171 548 AYSKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDK 627 (1224)
Q Consensus 548 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (1224)
.|.+-.-.
T Consensus 249 pYT~~Ll~------------------------------------------------------------------------ 256 (539)
T COG1123 249 PYTRGLLA------------------------------------------------------------------------ 256 (539)
T ss_pred cccHHHHh------------------------------------------------------------------------
Confidence 11100000
Q ss_pred cCCCCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHH
Q 047171 628 NFHDNSHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLT 707 (1224)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 707 (1224)
..
T Consensus 257 ----------------------------------------------------a~-------------------------- 258 (539)
T COG1123 257 ----------------------------------------------------AV-------------------------- 258 (539)
T ss_pred ----------------------------------------------------hC--------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 708 LIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLA 787 (1224)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~ 787 (1224)
| ..+...
T Consensus 259 ---------------------------------p--~~~~~~-------------------------------------- 265 (539)
T COG1123 259 ---------------------------------P--RLGDEK-------------------------------------- 265 (539)
T ss_pred ---------------------------------C--Cccccc--------------------------------------
Confidence 0 000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhh
Q 047171 788 YTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKG 867 (1224)
Q Consensus 788 ~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~ 867 (1224)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 868 PKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIR 947 (1224)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 947 (1224)
T Consensus 266 -------------------------------------------------------------------------------- 265 (539)
T COG1123 266 -------------------------------------------------------------------------------- 265 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCC--------CCccceeceeEEEeCCcEEEEEcCCCCCh
Q 047171 948 TIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSR--------PDQMIFKGLTLKIEAGKTVALVGQSGSGK 1019 (1224)
Q Consensus 948 ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~--------~~~~vL~~isl~I~~Ge~vaIVG~SGsGK 1019 (1224)
....... .+.+....++++|++.+|..+ ....+++||||++++||++||||+|||||
T Consensus 266 ----------~~~~~~~-----~~~~~~~ll~V~~l~k~y~~~~~~~~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGK 330 (539)
T COG1123 266 ----------IIRLPRR-----GPLRAEPLLSVRNLSKRYGSRKGLFVRERGEVKAVDDVSFDLREGETLGLVGESGSGK 330 (539)
T ss_pred ----------ccccccc-----cccccCceeEeeeeeeeeccccccccccccceeeeeeeeeEecCCCEEEEECCCCCCH
Confidence 0000000 000011258899999999742 12468999999999999999999999999
Q ss_pred HHHHHHHhcccCCCCceEEECCcc--CCCCCHHHHhcceEEEecCCCC--C-cccHHHHHccCCC---CCC----HHHHH
Q 047171 1020 STIIGLIERFYDPQSGSVMVDERN--IKSYNLRKLRSCIALVSQEPTL--F-AGTIRQNIVYGKE---VAT----EAEIR 1087 (1224)
Q Consensus 1020 STL~~lL~rl~~p~~G~I~idG~d--i~~~~~~~lR~~i~~V~Qdp~L--F-~gTIreNl~~~~~---~~~----deei~ 1087 (1224)
|||.++|+|+.+|++|+|.++|.| .+.-+...+|+++-+|+|||+- - ..||+++|.-... ... .+.+.
T Consensus 331 STlar~i~gL~~P~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQdp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~ 410 (539)
T COG1123 331 STLARILAGLLPPSSGSIIFDGQDLDLTGGELRRLRRRIQMVFQDPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVA 410 (539)
T ss_pred HHHHHHHhCCCCCCCceEEEeCcccccccchhhhhhhheEEEEeCcccccCccccHHHHHHhHHhhhcccchHHHHHHHH
Confidence 999999999999999999999977 3333355688999999999973 2 4799999963211 111 12233
Q ss_pred HHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--C
Q 047171 1088 KAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--G 1165 (1224)
Q Consensus 1088 ~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~ 1165 (1224)
+.++.+++.. .........||||||||+||||||..+|++||+|||||+||+.+.+.|.+.|.++.+ |
T Consensus 411 ~ll~~VgL~~----------~~l~ryP~elSGGQrQRvaIARALa~~P~lli~DEp~SaLDvsvqa~VlnLl~~lq~e~g 480 (539)
T COG1123 411 ELLELVGLPP----------EFLDRYPHELSGGQRQRVAIARALALEPKLLILDEPVSALDVSVQAQVLNLLKDLQEELG 480 (539)
T ss_pred HHHHHcCCCH----------HHHhcCchhcCcchhHHHHHHHHHhcCCCEEEecCCccccCHHHHHHHHHHHHHHHHHhC
Confidence 3344444331 134566778999999999999999999999999999999999999999999988764 7
Q ss_pred CeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHHh
Q 047171 1166 RTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKMQ 1217 (1224)
Q Consensus 1166 ~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~q 1217 (1224)
.|.|+|||+++.++. ||||+||++|+|+|.|+.+++.+. +...|.+.....
T Consensus 481 ~t~lfISHDl~vV~~i~drv~vm~~G~iVE~G~~~~v~~~-p~h~Ytr~L~~a 532 (539)
T COG1123 481 LTYLFISHDLAVVRYIADRVAVMYDGRIVEEGPTEKVFEN-PQHPYTRKLLAA 532 (539)
T ss_pred CEEEEEeCCHHHHHhhCceEEEEECCeEEEeCCHHHHhcC-CCChHHHHHHHh
Confidence 899999999999988 999999999999999999999887 577787765443
No 66
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=1.4e-71 Score=745.03 Aligned_cols=485 Identities=21% Similarity=0.286 Sum_probs=408.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Q 047171 65 KGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVA 144 (1224)
Q Consensus 65 ~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (1224)
..++....+.+...++|.++|+++++.|+.|||+ + ++|++++|+++|++.+++.+...+..++..++.+++.++++
T Consensus 1018 ~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ffd~---~-~~G~ilnR~s~Di~~id~~l~~~l~~~~~~~~~~i~~li~~ 1093 (1560)
T PTZ00243 1018 RFFLSYEAMRRGSRNMHRDLLRSVSRGTMSFFDT---T-PLGRILNRFSRDIDILDNTLPMSYLYLLQCLFSICSSILVT 1093 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCChhhccC---C-CccHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455666778899999999999999999998 5 99999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHH
Q 047171 145 FLLSWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMEL 224 (1224)
Q Consensus 145 ~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~ 224 (1224)
++.+|.+.++++.++.++..+..++.+..+...+......+.+.+.+.|.++|+++||+|++|+.+.++|.+..+...+.
T Consensus 1094 ~~~~p~~~~~~i~~~~~~~~i~~~~~~~~r~~~r~~~~~~s~l~s~~~E~l~G~~tIraf~~e~~~~~~~~~~~d~~~~~ 1173 (1560)
T PTZ00243 1094 SASQPFVLVALVPCGYLYYRLMQFYNSANREIRRIKSVAKSPVFTLLEEALQGSATITAYGKAHLVMQEALRRLDVVYSC 1173 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcHHHHHHHHHHcCHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 99998554443333333444455566667777777778889999999999999999999999999999999998888887
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH--HHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 225 GIKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVL--VTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRI 301 (1224)
Q Consensus 225 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri 301 (1224)
..+......+..... ++..+..+++.+++... ...+.+++|.+..++.+......|+..+...+..++++..|++|+
T Consensus 1174 ~~~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~l~~a~~l~~~l~~l~~~~~~le~~~~s~eRi 1253 (1560)
T PTZ00243 1174 SYLENVANRWLGVRVEFLSNIVVTVIALIGVIGTMLRATSQEIGLVSLSLTMAMQTTATLNWLVRQVATVEADMNSVERL 1253 (1560)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 776555555544443 33333333333334333 234457889888888888888899999999999999999999999
Q ss_pred HHHhccCCCCCCC--------------------------ccccc---ccccccccEEEEeEEEECCCC------------
Q 047171 302 FEMIDRVPVINSE--------------------------DEIGK---TLAYLRGEIEFKDVDFSYPTR------------ 340 (1224)
Q Consensus 302 ~~~l~~~~~~~~~--------------------------~~~~~---~~~~~~~~i~~~~v~f~y~~~------------ 340 (1224)
+++++..|+.+.. +.... +.....|.|+|+||+|+|++.
T Consensus 1254 ~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~f~nVsf~Y~~~~~~vL~~vsf~I 1333 (1560)
T PTZ00243 1254 LYYTDEVPHEDMPELDEEVDALERRTGMAADVTGTVVIEPASPTSAAPHPVQAGSLVFEGVQMRYREGLPLVLRGVSFRI 1333 (1560)
T ss_pred HHHHhcCCccccccccccccccccccccccccccccccccCCCcccCCCCCCCCeEEEEEEEEEeCCCCCceeecceEEE
Confidence 9999744321100 00000 011135789999999999643
Q ss_pred CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCH
Q 047171 341 PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASM 420 (1224)
Q Consensus 341 ~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~ 420 (1224)
++|+++||||+||||||||+++|+|+|+|++|+|++||+|+++++.+++|++||||||||.||+|||||||..+. ++++
T Consensus 1334 ~~GekVaIVGrTGSGKSTLl~lLlrl~~p~~G~I~IDG~di~~i~l~~LR~~I~iVpQdp~LF~gTIreNIdp~~-~~sd 1412 (1560)
T PTZ00243 1334 APREKVGIVGRTGSGKSTLLLTFMRMVEVCGGEIRVNGREIGAYGLRELRRQFSMIPQDPVLFDGTVRQNVDPFL-EASS 1412 (1560)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccCCHHHHHhcceEECCCCccccccHHHHhCccc-CCCH
Confidence 256799999999999999999999999999999999999999999999999999999999999999999998754 6889
Q ss_pred HHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccC-CCEEEEeCCCCCCCHHHHHHHHHHHHHH
Q 047171 421 ETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRD-PKILLLDEATSALDAESERIVQEALDQA 499 (1224)
Q Consensus 421 ~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~-~~ililDE~ts~lD~~~~~~i~~~l~~~ 499 (1224)
+++++|++.+++++++.++|+||||.+||+|.+|||||||||||||||+++ |+|||||||||+||++|++.|++.|++.
T Consensus 1413 eeI~~Al~~a~l~~~I~~lp~Gldt~vge~G~nLSgGQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~ 1492 (1560)
T PTZ00243 1413 AEVWAALELVGLRERVASESEGIDSRVLEGGSNYSVGQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSA 1492 (1560)
T ss_pred HHHHHHHHHCCChHHHhhCcccccccccCCcCcCCHHHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999996 8999999999999999999999999998
Q ss_pred cCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHHHH
Q 047171 500 SQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQ 557 (1224)
Q Consensus 500 ~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~ 557 (1224)
.+++|+|+||||++++.+||+|+||++|+|+|.|+|+||+++. ++.|+++++.+.
T Consensus 1493 ~~~~TvI~IAHRl~ti~~~DrIlVLd~G~VvE~Gt~~eLl~~~---~~~f~~l~~~~~ 1547 (1560)
T PTZ00243 1493 FSAYTVITIAHRLHTVAQYDKIIVMDHGAVAEMGSPRELVMNR---QSIFHSMVEALG 1547 (1560)
T ss_pred CCCCEEEEEeccHHHHHhCCEEEEEECCEEEEECCHHHHHhCC---CCHHHHHHHHhC
Confidence 8899999999999999999999999999999999999999752 689999987653
No 67
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=3.9e-71 Score=682.13 Aligned_cols=536 Identities=17% Similarity=0.183 Sum_probs=441.5
Q ss_pred HHHHHHHHhh-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 638 SLLRLLRMSA-IEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHY 716 (1224)
Q Consensus 638 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 716 (1224)
.+++++++.+ +.++.++++++++++.++.....+++++.+++..... .. .....++++.++..++.++..+
T Consensus 4 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~ 75 (555)
T TIGR01194 4 AIGEILALLRSPFPAITAFSIALGLAGGLAIIALLASINNAIHEENFL------GQ--GSLFSFGGLCLLALLFRIGADI 75 (555)
T ss_pred hHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc------cc--hHHHHHHHHHHHHHHHHHHHHH
Confidence 4567777777 7778888888888887877777777777665421100 00 1122244456666788888999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 717 NFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTW 796 (1224)
Q Consensus 717 ~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 796 (1224)
+....+.++..++|.+++++++++|++||+ ++++|++++|+++|++.++.++.. +..++..++.+++.++++++++|
T Consensus 76 ~~~~~~~~~~~~lR~~l~~~l~~~~~~~~~--~~~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~ 152 (555)
T TIGR01194 76 FPAYAGMHIIANLRIALCEKILGAPIEEID--RRGAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSV 152 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHH--hcCcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhH
Confidence 999999999999999999999999999999 678999999999999999998864 77777888888888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHH--HHHHHHHHHhhhHHHHHHH
Q 047171 797 RVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQD--RILDLFRETMKGPKKESIK 874 (1224)
Q Consensus 797 ~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~--~~~~~~~~~~~~~~~~~~~ 874 (1224)
.+++++++.+|+.+++.+...++.++...+.++..++..+.+.|.+.|++++|+|+.++ ...+++.+..++..+...+
T Consensus 153 ~L~li~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (555)
T TIGR01194 153 PMFAITISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHII 232 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 99999988888877777666666666677777788889999999999999999999954 5577888888877777666
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q 047171 875 QSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILD 954 (1224)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~ 954 (1224)
..........+..++..+...+.++++++. |.++.+.++++..+......|+..+...+..+.++..+++|+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~ 309 (555)
T TIGR01194 233 EILIFIAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGE 309 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 555554444444555444444455555443 78999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCC--CCCCCCC---CCCCCcccEEEEEEEEECCCCC--CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHh
Q 047171 955 RKSEIDPE--DPKASED---IEEPTKGFIELKNVFFSYPSRP--DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIE 1027 (1224)
Q Consensus 955 ~~~~~~~~--~~~~~~~---~~~~~~g~I~~~~vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~ 1027 (1224)
.+++.++. .+..... .+....+.|+|+||+|+|++.+ ++++|+|+||+|++||++|||||||||||||+++|+
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~ 389 (555)
T TIGR01194 310 RFNEPEPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFC 389 (555)
T ss_pred hhccccccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHh
Confidence 42221110 0100000 0111246799999999997532 236999999999999999999999999999999999
Q ss_pred cccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccc
Q 047171 1028 RFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYD 1107 (1224)
Q Consensus 1028 rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gld 1107 (1224)
|+|+|++|+|.+||+|+++++.+++|+++++|+|||++|++|+++|+ .++.++++++++++.+++++++..+|+|||
T Consensus 390 g~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~ 466 (555)
T TIGR01194 390 GLYIPQEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFS 466 (555)
T ss_pred CCCCCCCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccC
Confidence 99999999999999999999999999999999999999999999996 356789999999999999999999999999
Q ss_pred cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHH-Hh-cCCCeEEEEccCchhhhhcCEEE
Q 047171 1108 TYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALE-KM-MVGRTCVVVAHRLSTIQKADNIV 1185 (1224)
Q Consensus 1108 t~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~-~~-~~~~TvI~IaHrl~ti~~aD~I~ 1185 (1224)
|. .+|||||||||+||||++++|+|||||||||+||++|++.+++.+. +. .+++|+|+||||+++++.||+|+
T Consensus 467 t~-----~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~ 541 (555)
T TIGR01194 467 TT-----TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQII 541 (555)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEE
Confidence 95 6899999999999999999999999999999999999999998764 33 36899999999999999999999
Q ss_pred EEeCCEEEEe
Q 047171 1186 VIKNGKVVEQ 1195 (1224)
Q Consensus 1186 vl~~G~Ive~ 1195 (1224)
||++|+++|.
T Consensus 542 ~l~~G~i~~~ 551 (555)
T TIGR01194 542 KLAAGCIVKD 551 (555)
T ss_pred EEECCEEEEe
Confidence 9999999874
No 68
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.3e-71 Score=742.16 Aligned_cols=484 Identities=23% Similarity=0.289 Sum_probs=389.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 047171 63 PEKGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSIL 142 (1224)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 142 (1224)
+++.++..+.+.+...++|.++++++++.|++||++ + ++|++++|+++|++.+++.+...+..++..++.++++++
T Consensus 968 ~~~~~~~~~~~~~~~~~lr~~l~~~ll~~p~~ff~~---~-~~G~ilnr~s~Di~~id~~l~~~~~~~~~~~~~~i~~~i 1043 (1495)
T PLN03232 968 FTNSFWLISSSLHAAKRLHDAMLNSILRAPMLFFHT---N-PTGRVINRFSKDIGDIDRNVANLMNMFMNQLWQLLSTFA 1043 (1495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeeCc---C-CchHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 566777788999999999999999999999999998 5 999999999999999999999999999999888888888
Q ss_pred HHHHHhHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHH
Q 047171 143 VAFLLSWRLALAALPFSLLFIV-PGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKN 221 (1224)
Q Consensus 143 ~~~~~~~~l~l~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~ 221 (1224)
++++++|... +.++++++++. +..++.+..+...+......+...+.+.|.++|+++||+|++++.+.+++.+..+..
T Consensus 1044 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~s~~~~~~~E~l~G~~tIraf~~~~~~~~~~~~~~~~~ 1122 (1495)
T PLN03232 1044 LIGTVSTISL-WAIMPLLILFYAAYLYYQSTSREVRRLDSVTRSPIYAQFGEALNGLSSIRAYKAYDRMAKINGKSMDNN 1122 (1495)
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhcChHHHhcCCcHHHHHHHHHHHHHHH
Confidence 8887776433 33333333222 223333445556666778888999999999999999999999987777666655544
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcc-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 222 MELGIKQGLTKGLLLGSMGMTYGAWAFQSWVGSVLVTE-RGEK-----GGLVFVAGICTILGGVGIMSALPNLSFISQAT 295 (1224)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~-----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (1224)
.+..........+... .+..++.+++++.|.+.+.. +.+. .+.+..++.|+.....|+..+...+..++.+.
T Consensus 1123 ~~~~~~~~~~~~wl~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~l~~l~~~~~~~~~~~ 1200 (1495)
T PLN03232 1123 IRFTLANTSSNRWLTI--RLETLGGVMIWLTATFAVLRNGNAENQAGFASTMGLLLSYTLNITTLLSGVLRQASKAENSL 1200 (1495)
T ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4433322212111111 11111222222333333332 3221 12222345566666778888888899999999
Q ss_pred HHHHHHHHHhccCCCCCCCccccccc--ccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHH
Q 047171 296 TAATRIFEMIDRVPVINSEDEIGKTL--AYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVIS 361 (1224)
Q Consensus 296 ~s~~ri~~~l~~~~~~~~~~~~~~~~--~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ 361 (1224)
+|.+|+.++++.+++.+...+...++ .+..|+|+|+||+|+|++. ++|+++||||+||||||||++
T Consensus 1201 ~s~eRi~e~~~~~~e~~~~~~~~~~~~~~p~~g~I~f~nVsf~Y~~~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~ 1280 (1495)
T PLN03232 1201 NSVERVGNYIDLPSEATAIIENNRPVSGWPSRGSIKFEDVHLRYRPGLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLN 1280 (1495)
T ss_pred HHHHHHHHHhcCCccccccccCCCCCCCCCCCCcEEEEEEEEEECCCCCcccccceEEEcCCCEEEEECCCCCCHHHHHH
Confidence 99999999998766533211111111 1345789999999999532 257799999999999999999
Q ss_pred HHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccc
Q 047171 362 LLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLND 441 (1224)
Q Consensus 362 ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~ 441 (1224)
+|.|+|+|++|+|.+||+|+++++.+++|++|++|||||.||+|||||||.+++ ++++++++++++.++++++++++|+
T Consensus 1281 lL~rl~~p~~G~I~IdG~di~~i~~~~lR~~i~iVpQdp~LF~gTIr~NL~~~~-~~sdeei~~al~~a~l~~~I~~lp~ 1359 (1495)
T PLN03232 1281 ALFRIVELEKGRIMIDDCDVAKFGLTDLRRVLSIIPQSPVLFSGTVRFNIDPFS-EHNDADLWEALERAHIKDVIDRNPF 1359 (1495)
T ss_pred HHhCCCcCCCceEEECCEEhhhCCHHHHHhhcEEECCCCeeeCccHHHHcCCCC-CCCHHHHHHHHHHcCCHHHHHhCcC
Confidence 999999999999999999999999999999999999999999999999999986 5899999999999999999999999
Q ss_pred cccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEE
Q 047171 442 GYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLI 521 (1224)
Q Consensus 442 g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i 521 (1224)
|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++||+.|++.|++..+++|+|+||||++++.+||+|
T Consensus 1360 GLdt~v~e~G~~LSgGQrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~~~~TvI~IAHRl~ti~~~DrI 1439 (1495)
T PLN03232 1360 GLDAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEFKSCTMLVIAHRLNTIIDCDKI 1439 (1495)
T ss_pred CCCceecCCCCCCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHhCCEE
Confidence 99999999999999999999999999999999999999999999999999999999988899999999999999999999
Q ss_pred EEEeCceEEeecChHHHHhhccCCCchHHHHHHHHH
Q 047171 522 GVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQ 557 (1224)
Q Consensus 522 ~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~ 557 (1224)
+||++|+|+|.|+|+||++++ ++.|+++++.+.
T Consensus 1440 lVL~~G~ivE~Gt~~eLl~~~---~~~f~~l~~~~~ 1472 (1495)
T PLN03232 1440 LVLSSGQVLEYDSPQELLSRD---TSAFFRMVHSTG 1472 (1495)
T ss_pred EEEECCEEEEECCHHHHHhCC---CCHHHHHHHHhC
Confidence 999999999999999999872 358999987654
No 69
>TIGR01194 cyc_pep_trnsptr cyclic peptide transporter. This model describes cyclic peptide transporter in bacteria. Bacteria have elaborate pathways for the production of toxins and secondary metabolites. Many such compounds, including syringomycin and pyoverdine are synthesized on non-ribosomal templates consisting of a multienzyme complex. On several occasions the proteins of the complex and transporter protein are present on the same operon. Often times these compounds cross the biological membrane by specific transporters. Syringomycin is an amphipathic, cylclic lipodepsipeptide when inserted into host causes formation of channels, permeable to variety of cations. On the other hand, pyoverdine is a cyclic octa-peptidyl dihydroxyquinoline, which is efficient in sequestering iron for uptake.
Probab=100.00 E-value=4.8e-70 Score=672.43 Aligned_cols=513 Identities=17% Similarity=0.151 Sum_probs=427.1
Q ss_pred chHHHHhhcc-chhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChHHHHHH----HHH---HHHHHHHHHHHHH
Q 047171 3 TKGGLFRYAD-GKDKLLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSDISISIEA----VDK---VPEKGMCWTRTAE 74 (1224)
Q Consensus 3 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~ 74 (1224)
.+++++++++ +++ ..++++++++++.++.....|++++.++|.........+... +.. .++..++.+..+.
T Consensus 4 ~~~~l~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (555)
T TIGR01194 4 AIGEILALLRSPFP-AITAFSIALGLAGGLAIIALLASINNAIHEENFLGQGSLFSFGGLCLLALLFRIGADIFPAYAGM 82 (555)
T ss_pred hHHHHHHHHhhccH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3678888888 664 456677777777788778888888988875321111111111 111 1667788889999
Q ss_pred HHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHH
Q 047171 75 RQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALA 154 (1224)
Q Consensus 75 ~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ 154 (1224)
++..++|.++|+|++++|++||++ . ++|++++|+++|++.+++++.. ++.++.++++++++++++++++|.++++
T Consensus 83 ~~~~~lR~~l~~~l~~~~~~~~~~---~-~~G~l~srl~~Dv~~i~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~L~li 157 (555)
T TIGR01194 83 HIIANLRIALCEKILGAPIEEIDR---R-GAHNLIPLLTHDIDQINAFLFI-FPPIAIALAIFFFCIAYLAYLSVPMFAI 157 (555)
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHh---c-CcchhhHHHhhhHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 999999999999999999999998 5 9999999999999999999865 7788888888899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchH--HHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 155 ALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEH--QTLKRFSLALRKNMELGIKQGLTK 232 (1224)
Q Consensus 155 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~--~~~~~~~~~~~~~~~~~~~~~~~~ 232 (1224)
+++++|+.+++..++.++.++...+.++..++.++.+.|.+.|++++|+|+.++ .+.++|.+..++..+...+..+..
T Consensus 158 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~g~~~ik~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (555)
T TIGR01194 158 TISAIIIGTAAQLLAFMGGFKFFHAARDEEDAFNEHTHAIAFGAKELKIHGIRRLSFAHGAIQESANNIADLHIIEILIF 237 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhcCHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 999999988888888888888889999999999999999999999999999954 567889988888888777666555
Q ss_pred HHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCC-
Q 047171 233 GLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPV- 310 (1224)
Q Consensus 233 ~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~- 310 (1224)
....++. .+..+...+.+++|++. |.+++|.+++++.+......|+..+...+..++++.++++|+.++++.+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~t~g~l~a~~~~~~~l~~pi~~l~~~~~~~~~a~~s~~ri~~ll~~~~~~ 314 (555)
T TIGR01194 238 IAAENFGQLLFFLLIGCALFAAAMF---ASIDAAAISAFVLALLYIKGPLEMLVSALPILAQAQIACQRLADFGERFNEP 314 (555)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 5444433 33334444455566543 789999999999999999999999999999999999999999999863211
Q ss_pred -CC-C-Cccccc---ccccccccEEEEeEEEECCCC---------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC
Q 047171 311 -IN-S-EDEIGK---TLAYLRGEIEFKDVDFSYPTR---------------PDTPTIGLVGSSGSGKSTVISLLERFYDP 369 (1224)
Q Consensus 311 -~~-~-~~~~~~---~~~~~~~~i~~~~v~f~y~~~---------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~ 369 (1224)
.. + ++.... +.....+.|+++||+|+|++. ++|+++|||||||||||||+++|+|+|+|
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~~~~~~~~l~~vs~~i~~G~~~aivG~sGsGKSTl~~ll~g~~~p 394 (555)
T TIGR01194 315 EPELELSDADNVLLLAHDKSVDSIELKDVHMNPKAPEGSEGFALGPIDLRIAQGDIVFIVGENGCGKSTLAKLFCGLYIP 394 (555)
T ss_pred cccccccccccccccccCCCCceEEEEEEEEEeCCCCCCcCceeccceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC
Confidence 11 0 100000 111224679999999999742 24569999999999999999999999999
Q ss_pred CCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccC
Q 047171 370 VKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQ 449 (1224)
Q Consensus 370 ~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~ 449 (1224)
++|+|.+||+|+++++.+++|++++||+||+++|++|+++|+ .+++++++++++++.+++++++..+|+||||.
T Consensus 395 ~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~ti~~n~---~~~~~~~~~~~~~~~~~l~~~~~~lp~g~~t~--- 468 (555)
T TIGR01194 395 QEGEILLDGAAVSADSRDDYRDLFSAIFADFHLFDDLIGPDE---GEHASLDNAQQYLQRLEIADKVKIEDGGFSTT--- 468 (555)
T ss_pred CCcEEEECCEECCCCCHHHHHhhCcEEccChhhhhhhhhccc---ccchhHHHHHHHHHHcCCchhhcccccccCCc---
Confidence 999999999999999999999999999999999999999995 45678899999999999999999999999994
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHH-HH-cCCCeEEEEeCCcchhhccCEEEEEeCc
Q 047171 450 FGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALD-QA-SQGRTMIIIAHRLSTIRKADLIGVLQSG 527 (1224)
Q Consensus 450 ~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~-~~-~~~~t~i~i~H~l~~~~~ad~i~vl~~G 527 (1224)
.+|||||||||+||||++++|+|||||||||+||+++++.+.+.+. .. .+++|+|+||||+++++.||+|++|++|
T Consensus 469 --~~LSgGq~qRlalaRall~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tiiiisH~~~~~~~~d~i~~l~~G 546 (555)
T TIGR01194 469 --TALSTGQQKRLALICAWLEDRPILLFDEWAADQDPAFKRFFYEELLPDLKRQGKTIIIISHDDQYFELADQIIKLAAG 546 (555)
T ss_pred --ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHhCCEEEEEECC
Confidence 7899999999999999999999999999999999999999988764 33 4689999999999999999999999999
Q ss_pred eEEee
Q 047171 528 RVIES 532 (1224)
Q Consensus 528 ~i~~~ 532 (1224)
+++|.
T Consensus 547 ~i~~~ 551 (555)
T TIGR01194 547 CIVKD 551 (555)
T ss_pred EEEEe
Confidence 99874
No 70
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-71 Score=676.76 Aligned_cols=451 Identities=22% Similarity=0.388 Sum_probs=346.0
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CCcEEEECCEecCCCCHHH-HhcccE
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDP--VKGNILLDGHKIKKLQLKW-LRSQMG 394 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r~~i~ 394 (1224)
|+++||+++|++. .++++++|+||||||||||+++|+|+++| ++|+|.++|.++...+... .|+.+|
T Consensus 6 l~~~nl~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~ 85 (506)
T PRK13549 6 LEMKNITKTFGGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTERAGIA 85 (506)
T ss_pred EEEeeeEEEeCCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHHCCeE
Confidence 5666666666432 25679999999999999999999999996 8999999999998776543 467899
Q ss_pred EecCCCCCCcc-cHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHh
Q 047171 395 LVNQEPILFST-SIKENILIGKPG-----ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARAL 468 (1224)
Q Consensus 395 ~v~Q~~~lf~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal 468 (1224)
||+|++.+|.. |++||+.++... .+.++.. ..+.++++.+ |++........+||||||||++|||||
T Consensus 86 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~la~al 158 (506)
T PRK13549 86 IIHQELALVKELSVLENIFLGNEITPGGIMDYDAMY-----LRAQKLLAQL--KLDINPATPVGNLGLGQQQLVEIAKAL 158 (506)
T ss_pred EEEeccccCCCCcHHHHhhhcccccccCCcCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHHHHHHHH
Confidence 99999988865 999999987421 1122211 1234556666 565566778889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCC
Q 047171 469 IRDPKILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEG 546 (1224)
Q Consensus 469 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~ 546 (1224)
+.+|++||||||||+||+.+...+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 159 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~----- 233 (506)
T PRK13549 159 NKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMTED----- 233 (506)
T ss_pred hcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCCHH-----
Confidence 99999999999999999999999999998864 58899999999999876 999999999999887654332100
Q ss_pred chHHHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccC
Q 047171 547 GAYSKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQND 626 (1224)
Q Consensus 547 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (1224)
+..
T Consensus 234 ----~~~------------------------------------------------------------------------- 236 (506)
T PRK13549 234 ----DII------------------------------------------------------------------------- 236 (506)
T ss_pred ----HHH-------------------------------------------------------------------------
Confidence 000
Q ss_pred ccCCCCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHH
Q 047171 627 KNFHDNSHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFL 706 (1224)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 706 (1224)
..+
T Consensus 237 ----------------------------------------------------~~~------------------------- 239 (506)
T PRK13549 237 ----------------------------------------------------TMM------------------------- 239 (506)
T ss_pred ----------------------------------------------------HHh-------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 707 TLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASL 786 (1224)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~ 786 (1224)
+.. .
T Consensus 240 --------------------------------------~~~-~------------------------------------- 243 (506)
T PRK13549 240 --------------------------------------VGR-E------------------------------------- 243 (506)
T ss_pred --------------------------------------hCc-C-------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhh
Q 047171 787 AYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMK 866 (1224)
Q Consensus 787 ~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~ 866 (1224)
T Consensus 244 -------------------------------------------------------------------------------- 243 (506)
T PRK13549 244 -------------------------------------------------------------------------------- 243 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 867 GPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAI 946 (1224)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 946 (1224)
..
T Consensus 244 -------------------------------------------~~----------------------------------- 245 (506)
T PRK13549 244 -------------------------------------------LT----------------------------------- 245 (506)
T ss_pred -------------------------------------------cc-----------------------------------
Confidence 00
Q ss_pred HHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHH
Q 047171 947 RTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLI 1026 (1224)
Q Consensus 947 ~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL 1026 (1224)
.. .+.. .. .+....|+++|++++|+.+.+.++|+|+||+|++||++||+|+||||||||+++|
T Consensus 246 ----~~--~~~~-~~----------~~~~~~l~~~~l~~~~~~~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i 308 (506)
T PRK13549 246 ----AL--YPRE-PH----------TIGEVILEVRNLTAWDPVNPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCL 308 (506)
T ss_pred ----cc--cccc-cc----------CCCCceEEEecCccccccccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHH
Confidence 00 0000 00 0011248999999999532234699999999999999999999999999999999
Q ss_pred hcccC-CCCceEEECCccCCCCCH-HHHhcceEEEecCC---CCC-cccHHHHHccCCC-C------CCHHHHHHHHHHH
Q 047171 1027 ERFYD-PQSGSVMVDERNIKSYNL-RKLRSCIALVSQEP---TLF-AGTIRQNIVYGKE-V------ATEAEIRKAAVLA 1093 (1224)
Q Consensus 1027 ~rl~~-p~~G~I~idG~di~~~~~-~~lR~~i~~V~Qdp---~LF-~gTIreNl~~~~~-~------~~deei~~al~~a 1093 (1224)
+|+++ |++|+|.++|.++...+. +.+|++++||||+| .+| ..|+.||+.++.. . .+.++. ..
T Consensus 309 ~Gl~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~-----~~ 383 (506)
T PRK13549 309 FGAYPGRWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRDGIVPVMGVGKNITLAALDRFTGGSRIDDAAE-----LK 383 (506)
T ss_pred hCCCCCCCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhCCCcCCCCHHHHhhhhhhhhhccCcccChHHH-----HH
Confidence 99998 599999999998865543 44678899999996 355 4699999986421 0 111111 12
Q ss_pred hHHHHHHhccccccc-ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEE
Q 047171 1094 NAHEFISSTEDGYDT-YCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVV 1171 (1224)
Q Consensus 1094 ~l~~~I~~lp~gldt-~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~I 1171 (1224)
.+.+.+..+ |++. .......+||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. +|+|||+|
T Consensus 384 ~~~~~l~~~--~l~~~~~~~~~~~LSgG~kqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~ 461 (506)
T PRK13549 384 TILESIQRL--KVKTASPELAIARLSGGNQQKAVLAKCLLLNPKILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVI 461 (506)
T ss_pred HHHHHHHhc--CccCCCcccccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEE
Confidence 233444444 3432 2345567899999999999999999999999999999999999999999998865 58899999
Q ss_pred ccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1172 AHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1172 aHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
||+++.+.. ||++++|++|+++..|+++++.
T Consensus 462 sHd~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 493 (506)
T PRK13549 462 SSELPEVLGLSDRVLVMHEGKLKGDLINHNLT 493 (506)
T ss_pred CCCHHHHHHhCCEEEEEECCEEEEEeccccCC
Confidence 999999866 9999999999999999988763
No 71
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-70 Score=683.49 Aligned_cols=488 Identities=25% Similarity=0.399 Sum_probs=352.5
Q ss_pred cEEEEeEEEECCCC--------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecC----------
Q 047171 327 EIEFKDVDFSYPTR--------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIK---------- 382 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~--------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~---------- 382 (1224)
-|+++|++++|+.. ++++++||||+||||||||+++|+|+++|++|+|.++|.++.
T Consensus 12 ~l~v~~l~~~y~~~~~~~~~l~~is~~v~~Ge~~~lvG~nGsGKSTLl~~l~Gll~p~~G~i~~~g~~~~~~~~~~~~~~ 91 (623)
T PRK10261 12 VLAVENLNIAFMQEQQKIAAVRNLSFSLQRGETLAIVGESGSGKSVTALALMRLLEQAGGLVQCDKMLLRRRSRQVIELS 91 (623)
T ss_pred eEEEeceEEEecCCCCceeEEEeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCeEEEECCEEeccccccccccc
Confidence 36666666666420 256799999999999999999999999999999999997552
Q ss_pred CCCHH---HHh-cccEEecCCC--CCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhcccccc---ccccC
Q 047171 383 KLQLK---WLR-SQMGLVNQEP--ILFS-TSIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYE---TKVGQ 449 (1224)
Q Consensus 383 ~~~~~---~~r-~~i~~v~Q~~--~lf~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~---t~~~~ 449 (1224)
+.+.. .+| +.||||+|+| .+++ .||.|||.++.. ..+.++.. ..+.+.++.+ |+. .....
T Consensus 92 ~~~~~~~~~~r~~~ig~v~Q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~ 164 (623)
T PRK10261 92 EQSAAQMRHVRGADMAMIFQEPMTSLNPVFTVGEQIAESIRLHQGASREEAM-----VEAKRMLDQV--RIPEAQTILSR 164 (623)
T ss_pred cCCHHHHHHHhCCCEEEEEeCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHC--CCCChhhHHhC
Confidence 22322 233 4799999998 5776 499999987521 12222211 1233455555 442 34677
Q ss_pred CCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEeCCcchhhc-cCEEEEEeC
Q 047171 450 FGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQAS-Q-GRTMIIIAHRLSTIRK-ADLIGVLQS 526 (1224)
Q Consensus 450 ~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~i~H~l~~~~~-ad~i~vl~~ 526 (1224)
...+|||||||||+|||||+.+|++|||||||++||+.+.+.+.+.++++. + |+|+|+|||+++.+.. ||+|++|++
T Consensus 165 ~~~~LSgGq~QRv~iA~AL~~~P~lLllDEPt~~LD~~~~~~l~~ll~~l~~~~g~tvi~itHdl~~~~~~adri~vl~~ 244 (623)
T PRK10261 165 YPHQLSGGMRQRVMIAMALSCRPAVLIADEPTTALDVTIQAQILQLIKVLQKEMSMGVIFITHDMGVVAEIADRVLVMYQ 244 (623)
T ss_pred CCccCCHHHHHHHHHHHHHhCCCCEEEEeCCCCccCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEeeC
Confidence 889999999999999999999999999999999999999999999998874 3 8999999999999876 999999999
Q ss_pred ceEEeecChHHHHhhccCCCchHHHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCC
Q 047171 527 GRVIESGSHDVLMQMNNGEGGAYSKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSP 606 (1224)
Q Consensus 527 G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 606 (1224)
|++++.|+++++.... ...|.+-.. .. . + .. . .
T Consensus 245 G~i~~~g~~~~~~~~~---~~~~~~~l~----~~--------~-~----~~------~-------~-------------- 277 (623)
T PRK10261 245 GEAVETGSVEQIFHAP---QHPYTRALL----AA--------V-P----QL------G-------A-------------- 277 (623)
T ss_pred CeecccCCHHHhhcCC---CChhhhhhh----hc--------c-C----cc------c-------c--------------
Confidence 9999999988875431 011110000 00 0 0 00 0 0
Q ss_pred CccccccCcccccccccccCccCCCCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCc
Q 047171 607 TFSISMTGSFQMHSVENQNDKNFHDNSHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDD 686 (1224)
Q Consensus 607 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 686 (1224)
+.+ . .
T Consensus 278 -----~~~------------~---~------------------------------------------------------- 282 (623)
T PRK10261 278 -----MKG------------L---D------------------------------------------------------- 282 (623)
T ss_pred -----ccc------------c---c-------------------------------------------------------
Confidence 000 0 0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHH
Q 047171 687 SKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLV 766 (1224)
Q Consensus 687 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i 766 (1224)
.+ .-+....
T Consensus 283 -----------------------------------------------------~~-~~~~~~~----------------- 291 (623)
T PRK10261 283 -----------------------------------------------------YP-RRFPLIS----------------- 291 (623)
T ss_pred -----------------------------------------------------CC-ccccccc-----------------
Confidence 00 0000000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHH
Q 047171 767 RSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHR 846 (1224)
Q Consensus 767 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~ 846 (1224)
T Consensus 292 -------------------------------------------------------------------------------- 291 (623)
T PRK10261 292 -------------------------------------------------------------------------------- 291 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHH
Q 047171 847 TITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTG 926 (1224)
Q Consensus 847 tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~ 926 (1224)
T Consensus 292 -------------------------------------------------------------------------------- 291 (623)
T PRK10261 292 -------------------------------------------------------------------------------- 291 (623)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCC-CCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCC--------Ccccee
Q 047171 927 KNIADAGSMTSDIAKGSSAIRTIFTILDRKS-EIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRP--------DQMIFK 997 (1224)
Q Consensus 927 ~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~-~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~--------~~~vL~ 997 (1224)
...+. ......... . ......|+++||++.|+.+. ..++|+
T Consensus 292 --------------------------~~~~~~~~~~~~~~~---~-~~~~~~L~~~~l~~~y~~~~~~~~~~~~~~~~l~ 341 (623)
T PRK10261 292 --------------------------LEHPAKQEPPIEQDT---V-VDGEPILQVRNLVTRFPLRSGLLNRVTREVHAVE 341 (623)
T ss_pred --------------------------cccccccCccccccc---c-cCCCceEEEeeeEEEEcCCCccccccCCceEEEe
Confidence 00000 000000000 0 00112599999999996321 236899
Q ss_pred ceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHH---HHhcceEEEecCCC--CCc-ccHH
Q 047171 998 GLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLR---KLRSCIALVSQEPT--LFA-GTIR 1071 (1224)
Q Consensus 998 ~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~---~lR~~i~~V~Qdp~--LF~-gTIr 1071 (1224)
|+||+|++||++||+|+||||||||+++|+|+.+|++|+|.++|.++...+.. .+|++|+||||+|. ++. .|+.
T Consensus 342 ~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l~~~~tv~ 421 (623)
T PRK10261 342 KVSFDLWPGETLSLVGESGSGKSTTGRALLRLVESQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASLDPRQTVG 421 (623)
T ss_pred eeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhcCCCCCHH
Confidence 99999999999999999999999999999999999999999999999877643 46789999999983 664 6999
Q ss_pred HHHccCC---CCCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccC
Q 047171 1072 QNIVYGK---EVATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEAT 1144 (1224)
Q Consensus 1072 eNl~~~~---~~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaT 1144 (1224)
+|+.++. ...+. +++.+.++..++. +........+||||||||++|||||+.+|+||||||||
T Consensus 422 ~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~----------~~~~~~~~~~LSgGqrQRv~iAraL~~~p~llllDEPt 491 (623)
T PRK10261 422 DSIMEPLRVHGLLPGKAAAARVAWLLERVGLL----------PEHAWRYPHEFSGGQRQRICIARALALNPKVIIADEAV 491 (623)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCC----------HHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 9997531 11112 2233333333331 11233445679999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchhHH-HHH
Q 047171 1145 SALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYS-LIK 1215 (1224)
Q Consensus 1145 SaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~-l~~ 1215 (1224)
|+||+.+.+.|.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++... +...|.+ ++.
T Consensus 492 s~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~~v~~~~dri~vl~~G~iv~~g~~~~i~~~-p~~~~~~~l~~ 565 (623)
T PRK10261 492 SALDVSIRGQIINLLLDLQRDFGIAYLFISHDMAVVERISHRVAVMYLGQIVEIGPRRAVFEN-PQHPYTRKLMA 565 (623)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhcC-CCCHHHHHHHh
Confidence 99999999999999988753 7899999999999876 999999999999999999999875 3455544 443
No 72
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.8e-69 Score=603.37 Aligned_cols=530 Identities=23% Similarity=0.275 Sum_probs=452.1
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 659 GSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIF 738 (1224)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll 738 (1224)
++.+..++....+.++-++.|...... .........++.+++.++..++.+++.+...+.+.++..++...+|...+
T Consensus 31 fS~~INiL~L~~~lyMLQVyDRVL~S~---s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a~~ 107 (580)
T COG4618 31 FSAVINLLALTGPLYMLQVYDRVLPSR---SVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAASF 107 (580)
T ss_pred HHHHHHHHHHhhhHHHHHHHhhhccCC---CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 333444555556666777766554321 11223334445566677788899999999999999999999999999998
Q ss_pred cCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 739 TFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSV 818 (1224)
Q Consensus 739 ~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~ 818 (1224)
+.+..-- ..|+= ..--+|.+.++.++...-...+...--..+.+.++|.+.++++++.++...+++.+.++...
T Consensus 108 ~~~l~~~-----~~g~~-~Q~LrDL~qvR~Fltg~g~~A~fDaPW~P~yl~v~fl~Hp~lG~~a~~ga~iLv~la~ln~~ 181 (580)
T COG4618 108 SAPLLRR-----GSGDG-LQPLRDLDQVRQFLTGTGLTAFFDAPWMPLYLAVIFLFHPWLGLIALAGAIILVVLALLNER 181 (580)
T ss_pred hhHHhhc-----CCCcc-ccchhhHHHHHHHHcCCCcchhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665422 12211 12347899999998774444444444444556677788888888888888888777787777
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 819 LMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTF 898 (1224)
Q Consensus 819 ~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 898 (1224)
..++..++..+...+.+++..-+..+.++|++.|......++|.+....+.....+.+-..+....++-.+-.+....++
T Consensus 182 ~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~lQs~iL 261 (580)
T COG4618 182 ATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMALQSAVL 261 (580)
T ss_pred HhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777777777778888999999999999999999999999999999999988888888888888888888888999999
Q ss_pred HHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCCcccE
Q 047171 899 WYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEIDPEDPKASEDIEEPTKGFI 978 (1224)
Q Consensus 899 ~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I 978 (1224)
..|++++..|++|+|.+++....+-....|+...+..|.++..+..+.+|+.+++...++..+.- +.+..+|.+
T Consensus 262 g~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~~m------~LP~P~g~L 335 (580)
T COG4618 262 GLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAERM------PLPAPQGAL 335 (580)
T ss_pred hcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCC------CCCCCCcee
Confidence 99999999999999999999888888899999999999999999999999999998765433211 122346899
Q ss_pred EEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEE
Q 047171 979 ELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIAL 1058 (1224)
Q Consensus 979 ~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1058 (1224)
.++++++.=|.. ++|+|+|+||+++|||-+|||||||||||||.++|.|.++|.+|.|.+||-|+++++.+.+=++|||
T Consensus 336 ~Ve~l~~~PPg~-~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hiGY 414 (580)
T COG4618 336 SVERLTAAPPGQ-KKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHIGY 414 (580)
T ss_pred eEeeeeecCCCC-CCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhccccCc
Confidence 999999975543 5789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEE
Q 047171 1059 VSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMIL 1138 (1224)
Q Consensus 1059 V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~IL 1138 (1224)
.|||..||+|||+|||+-+.++.+++.|.+|++.++.||.|.++|+||||.||++|..|||||||||+||||++.+|.++
T Consensus 415 LPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~lv 494 (580)
T COG4618 415 LPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPFLV 494 (580)
T ss_pred CcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCcEE
Confidence 99999999999999999777888999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1139 LLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1139 lLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
+||||-|+||.+.|+.+.++|.+.. +|+|+|+||||.+.+..+|+|+||++|++..+|+-+|.+++
T Consensus 495 VLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 495 VLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 9999999999999999999998876 69999999999999999999999999999999999999875
No 73
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=3.8e-70 Score=670.85 Aligned_cols=440 Identities=27% Similarity=0.459 Sum_probs=334.8
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCCCCHHH---Hh-cccEEecCCCC--CCc-ccHHH
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKKLQLKW---LR-SQMGLVNQEPI--LFS-TSIKE 409 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~~---~r-~~i~~v~Q~~~--lf~-~ti~~ 409 (1224)
+++++||+||||||||||+++|+|+++| ++|+|.++|+++...+... .| ++||||+|++. +++ .|+.+
T Consensus 34 ~Ge~~~iiG~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~Q~~~~~~~~~~~~~~ 113 (529)
T PRK15134 34 AGETLALVGESGSGKSVTALSILRLLPSPPVVYPSGDIRFHGESLLHASEQTLRGVRGNKIAMIFQEPMVSLNPLHTLEK 113 (529)
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCCCCCcCCccceEEEECCEecccCCHHHHHHHhcCceEEEecCchhhcCchhhHHH
Confidence 5679999999999999999999999987 7999999999998776432 33 57999999985 444 48999
Q ss_pred HHhcCC---CCCCHHHHHHHHHHhcHHHHHHhccccccc---cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCC
Q 047171 410 NILIGK---PGASMETVVKAAQAANVHDFIMKLNDGYET---KVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSA 483 (1224)
Q Consensus 410 ni~~g~---~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t---~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~ 483 (1224)
|+.++. ...+.++. ...+++.++.+ |++. .......+||||||||++|||||+.+|++||||||||+
T Consensus 114 ~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~~~LSgGe~qrv~iAraL~~~p~llllDEPt~~ 186 (529)
T PRK15134 114 QLYEVLSLHRGMRREAA-----RGEILNCLDRV--GIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIADEPTTA 186 (529)
T ss_pred HHHHHHHHhcCCCHHHH-----HHHHHHHHHHC--CCCChHHHHhhCCcccCHHHHHHHHHHHHHhcCCCEEEEcCCCCc
Confidence 986421 11122221 11233445555 4432 34667889999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHHHHHhh
Q 047171 484 LDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQSAM 560 (1224)
Q Consensus 484 lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~~~ 560 (1224)
||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++.... ...+.
T Consensus 187 LD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~---~~~~~---------- 253 (529)
T PRK15134 187 LDVSVQAQILQLLRELQQELNMGLLFITHNLSIVRKLADRVAVMQNGRCVEQNRAATLFSAP---THPYT---------- 253 (529)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCeEEEEcCcHHHHHHhcCEEEEEECCEEEEeCCHHHHhhCC---CCHHH----------
Confidence 99999999999998864 37999999999999876 9999999999999988877654210 00000
Q ss_pred hhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccCCCCCCCchHHH
Q 047171 561 RNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNFHDNSHSPSSLL 640 (1224)
Q Consensus 561 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (1224)
T Consensus 254 -------------------------------------------------------------------------------- 253 (529)
T PRK15134 254 -------------------------------------------------------------------------------- 253 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 641 RLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAI 720 (1224)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 720 (1224)
..+
T Consensus 254 --------------------------------------~~~--------------------------------------- 256 (529)
T PRK15134 254 --------------------------------------QKL--------------------------------------- 256 (529)
T ss_pred --------------------------------------HHH---------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 721 MGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAI 800 (1224)
Q Consensus 721 ~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l 800 (1224)
+. .+ .
T Consensus 257 -------------~~----~~-------~--------------------------------------------------- 261 (529)
T PRK15134 257 -------------LN----SE-------P--------------------------------------------------- 261 (529)
T ss_pred -------------HH----hC-------c---------------------------------------------------
Confidence 00 00 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHH
Q 047171 801 VMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSG 880 (1224)
Q Consensus 801 v~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~ 880 (1224)
T Consensus 262 -------------------------------------------------------------------------------- 261 (529)
T PRK15134 262 -------------------------------------------------------------------------------- 261 (529)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC
Q 047171 881 IGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEID 960 (1224)
Q Consensus 881 ~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~ 960 (1224)
...+. .
T Consensus 262 -------------------------------------------------------------------------~~~~~-~ 267 (529)
T PRK15134 262 -------------------------------------------------------------------------SGDPV-P 267 (529)
T ss_pred -------------------------------------------------------------------------ccccc-c
Confidence 00000 0
Q ss_pred CCCCCCCCCCCCCCcccEEEEEEEEECCCC--------CCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC
Q 047171 961 PEDPKASEDIEEPTKGFIELKNVFFSYPSR--------PDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP 1032 (1224)
Q Consensus 961 ~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~--------~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p 1032 (1224)
. .. . ....|+++|++++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|++ |
T Consensus 268 ~-~~-----~---~~~~l~~~~l~~~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~-~ 337 (529)
T PRK15134 268 L-PE-----P---ASPLLDVEQLQVAFPIRKGILKRTVDHNVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLI-N 337 (529)
T ss_pred c-CC-----C---CCCcccccCcEEEeecCccccccccccceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcC-C
Confidence 0 00 0 01148999999999621 1246999999999999999999999999999999999998 4
Q ss_pred CCceEEECCccCCCCCHHH---HhcceEEEecCC--CCCc-ccHHHHHccCCC----CCCHHHHHHHHHHHhHHHHHHhc
Q 047171 1033 QSGSVMVDERNIKSYNLRK---LRSCIALVSQEP--TLFA-GTIRQNIVYGKE----VATEAEIRKAAVLANAHEFISST 1102 (1224)
Q Consensus 1033 ~~G~I~idG~di~~~~~~~---lR~~i~~V~Qdp--~LF~-gTIreNl~~~~~----~~~deei~~al~~a~l~~~I~~l 1102 (1224)
++|+|.+||.++...+... +|++++||||++ .+|. .|++||+.++.. ..+..+.. ..+.+++..+
T Consensus 338 ~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~~l~~~ 412 (529)
T PRK15134 338 SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQRE-----QQVIAVMEEV 412 (529)
T ss_pred CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhcCCcccHHHHHHHHHHhccccCChHHHH-----HHHHHHHHHc
Confidence 8999999999987766543 578899999998 3665 599999986421 11111111 1122233332
Q ss_pred ccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh
Q 047171 1103 EDGYD-TYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQ 1179 (1224)
Q Consensus 1103 p~gld-t~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~ 1179 (1224)
|++ ........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.
T Consensus 413 --~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~~~~ 490 (529)
T PRK15134 413 --GLDPETRHRYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLHVVR 490 (529)
T ss_pred --CCCHHHHhcCCccCCHHHHHHHHHHHHHhCCCCEEEeeCCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHH
Confidence 332 123455678999999999999999999999999999999999999999999998753 789999999999987
Q ss_pred h-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1180 K-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1180 ~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
. ||+|++|++|+|++.|++++++..
T Consensus 491 ~~~d~i~~l~~G~i~~~~~~~~~~~~ 516 (529)
T PRK15134 491 ALCHQVIVLRQGEVVEQGDCERVFAA 516 (529)
T ss_pred HhcCeEEEEECCEEEEEcCHHHHhcC
Confidence 6 999999999999999999999865
No 74
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-70 Score=665.10 Aligned_cols=434 Identities=20% Similarity=0.364 Sum_probs=333.5
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH-HhcccEEecCCCCCCcc-cHHHHHhcCCCCC-
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW-LRSQMGLVNQEPILFST-SIKENILIGKPGA- 418 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~~~- 418 (1224)
+++++||+||||||||||+++|+|+++|++|+|.++|+++...+... .+++|+||+|++.++.. |++||+.++....
T Consensus 30 ~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~ 109 (510)
T PRK09700 30 PGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTK 109 (510)
T ss_pred CCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhcccccc
Confidence 57799999999999999999999999999999999999998877654 34679999999988865 9999998764210
Q ss_pred --------CHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHH
Q 047171 419 --------SMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESER 490 (1224)
Q Consensus 419 --------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~ 490 (1224)
+.++.. ..+.+.++.+ |++........+||||||||++|||||+.+|++|||||||++||+.+..
T Consensus 110 ~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~ 182 (510)
T PRK09700 110 KVCGVNIIDWREMR-----VRAAMMLLRV--GLKVDLDEKVANLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVD 182 (510)
T ss_pred ccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHH
Confidence 111111 2234556665 5655567778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHHHHHhhhhhcccCC
Q 047171 491 IVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQSAMRNEVASGS 568 (1224)
Q Consensus 491 ~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 568 (1224)
.+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++... +..+ .
T Consensus 183 ~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~---------~~~~---------~---- 240 (510)
T PRK09700 183 YLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSND---------DIVR---------L---- 240 (510)
T ss_pred HHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCHH---------HHHH---------H----
Confidence 9999998864 58999999999999976 999999999999887765543210 0000 0
Q ss_pred CCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccCCCCCCCchHHHHHHHHhhH
Q 047171 569 YNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNFHDNSHSPSSLLRLLRMSAI 648 (1224)
Q Consensus 569 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (1224)
T Consensus 241 -------------------------------------------------------------------------------- 240 (510)
T PRK09700 241 -------------------------------------------------------------------------------- 240 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 649 EWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQR 728 (1224)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (1224)
.
T Consensus 241 --------------------------------~----------------------------------------------- 241 (510)
T PRK09700 241 --------------------------------M----------------------------------------------- 241 (510)
T ss_pred --------------------------------h-----------------------------------------------
Confidence 0
Q ss_pred HHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 729 VREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPL 808 (1224)
Q Consensus 729 lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl 808 (1224)
+. ..
T Consensus 242 ----------------~~--~~---------------------------------------------------------- 245 (510)
T PRK09700 242 ----------------VG--RE---------------------------------------------------------- 245 (510)
T ss_pred ----------------cC--CC----------------------------------------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH
Q 047171 809 NIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQF 888 (1224)
Q Consensus 809 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 888 (1224)
T Consensus 246 -------------------------------------------------------------------------------- 245 (510)
T PRK09700 246 -------------------------------------------------------------------------------- 245 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCC
Q 047171 889 LTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEIDPEDPKASE 968 (1224)
Q Consensus 889 ~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~ 968 (1224)
.. . ......+ ....
T Consensus 246 ---------------------~~-----------------------------------~---~~~~~~~--~~~~----- 259 (510)
T PRK09700 246 ---------------------LQ-----------------------------------N---RFNAMKE--NVSN----- 259 (510)
T ss_pred ---------------------cc-----------------------------------c---ccccccc--cccc-----
Confidence 00 0 0000000 0000
Q ss_pred CCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC
Q 047171 969 DIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN 1048 (1224)
Q Consensus 969 ~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~ 1048 (1224)
. .....|+++|+++.|. .+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+
T Consensus 260 -~--~~~~~l~~~~l~~~~~-----~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p~~G~I~~~g~~~~~~~ 331 (510)
T PRK09700 260 -L--AHETVFEVRNVTSRDR-----KKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKRAGGEIRLNGKDISPRS 331 (510)
T ss_pred -C--CCCcEEEEeCccccCC-----CcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCeEEECCEECCCCC
Confidence 0 0112599999998762 2899999999999999999999999999999999999999999999999887654
Q ss_pred H-HHHhcceEEEecCC---CCCc-ccHHHHHccCCCC-----------CCHHHHHHHHHHHhHHHHHHhcccccc-cccC
Q 047171 1049 L-RKLRSCIALVSQEP---TLFA-GTIRQNIVYGKEV-----------ATEAEIRKAAVLANAHEFISSTEDGYD-TYCG 1111 (1224)
Q Consensus 1049 ~-~~lR~~i~~V~Qdp---~LF~-gTIreNl~~~~~~-----------~~deei~~al~~a~l~~~I~~lp~gld-t~vg 1111 (1224)
. ..+|++++||||++ .+|. .|++||+.++... .+..+. ...+.+.++.+ |+. ....
T Consensus 332 ~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~ 404 (510)
T PRK09700 332 PLDAVKKGMAYITESRRDNGFFPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDE-----QRTAENQRELL--ALKCHSVN 404 (510)
T ss_pred HHHHHHCCcEEccCccccCCCcCCCcHHHHhccccccccccccccccccChHHH-----HHHHHHHHHhc--CCCCCCcc
Confidence 4 45678999999984 4665 5999999875310 011111 11223334333 332 2234
Q ss_pred CCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeC
Q 047171 1112 ERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKN 1189 (1224)
Q Consensus 1112 e~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~ 1189 (1224)
.....||||||||++|||||+++|+|||||||||+||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++
T Consensus 405 ~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~~~~~~~d~i~~l~~ 484 (510)
T PRK09700 405 QNITELSGGNQQKVLISKWLCCCPEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELPEIITVCDRIAVFCE 484 (510)
T ss_pred CccccCChHHHHHHHHHHHHhcCCCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCEEEEEEC
Confidence 4556799999999999999999999999999999999999999999998864 57899999999998865 999999999
Q ss_pred CEEEEecChhH
Q 047171 1190 GKVVEQGTQSS 1200 (1224)
Q Consensus 1190 G~Ive~Gt~~e 1200 (1224)
|++++.++..+
T Consensus 485 G~i~~~~~~~~ 495 (510)
T PRK09700 485 GRLTQILTNRD 495 (510)
T ss_pred CEEEEEecCcc
Confidence 99999887633
No 75
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.1e-69 Score=662.29 Aligned_cols=438 Identities=21% Similarity=0.365 Sum_probs=336.0
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH-HhcccEEecCCCCCCcc-cH
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW-LRSQMGLVNQEPILFST-SI 407 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~~v~Q~~~lf~~-ti 407 (1224)
++|+||+. .+++++||+||||||||||+++|+|+++|++|+|.++|.++...+... .++.++||+|++.++.. |+
T Consensus 20 l~~is~~i---~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 96 (501)
T PRK10762 20 LSGAALNV---YPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQLTI 96 (501)
T ss_pred eeeeeEEE---cCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCCCcH
Confidence 44444443 256799999999999999999999999999999999999987665443 45689999999988865 99
Q ss_pred HHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 047171 408 KENILIGKPG------ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEAT 481 (1224)
Q Consensus 408 ~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~t 481 (1224)
+||+.++... .+.++.. ..+.+.++.+ |+.........+||||||||++|||||+.+|++|||||||
T Consensus 97 ~e~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt 169 (501)
T PRK10762 97 AENIFLGREFVNRFGRIDWKKMY-----AEADKLLARL--NLRFSSDKLVGELSIGEQQMVEIAKVLSFESKVIIMDEPT 169 (501)
T ss_pred HHHhhhccccccccCccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCc
Confidence 9999986421 1111111 1234556665 5555566778899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHHHHHh
Q 047171 482 SALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQSA 559 (1224)
Q Consensus 482 s~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~~ 559 (1224)
++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++... .+.
T Consensus 170 ~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~---------~~~------ 234 (501)
T PRK10762 170 DALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLTED---------SLI------ 234 (501)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCCHH---------HHH------
Confidence 9999999999999998763 57899999999999876 999999999999886643322100 000
Q ss_pred hhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccCCCCCCCchHH
Q 047171 560 MRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNFHDNSHSPSSL 639 (1224)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 639 (1224)
T Consensus 235 -------------------------------------------------------------------------------- 234 (501)
T PRK10762 235 -------------------------------------------------------------------------------- 234 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 640 LRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFA 719 (1224)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 719 (1224)
..+
T Consensus 235 ---------------------------------------~~~-------------------------------------- 237 (501)
T PRK10762 235 ---------------------------------------EMM-------------------------------------- 237 (501)
T ss_pred ---------------------------------------HHh--------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 720 IMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVA 799 (1224)
Q Consensus 720 ~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 799 (1224)
+.. .
T Consensus 238 -------------------------~~~-~-------------------------------------------------- 241 (501)
T PRK10762 238 -------------------------VGR-K-------------------------------------------------- 241 (501)
T ss_pred -------------------------cCC-C--------------------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHH
Q 047171 800 IVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFS 879 (1224)
Q Consensus 800 lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ 879 (1224)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK10762 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCC
Q 047171 880 GIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEI 959 (1224)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~ 959 (1224)
. ....+..
T Consensus 242 ---------------------------------------------------------------------~---~~~~~~~ 249 (501)
T PRK10762 242 ---------------------------------------------------------------------L---EDQYPRL 249 (501)
T ss_pred ---------------------------------------------------------------------c---ccccccc
Confidence 0 0000000
Q ss_pred CCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEE
Q 047171 960 DPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMV 1039 (1224)
Q Consensus 960 ~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~i 1039 (1224)
.. ++....|+++|+++ ++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+
T Consensus 250 ~~----------~~~~~~l~~~~l~~--------~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p~~G~I~~ 311 (501)
T PRK10762 250 DK----------APGEVRLKVDNLSG--------PGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTL 311 (501)
T ss_pred cc----------CCCCcEEEEeCccc--------CCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCCCceEEEE
Confidence 00 00012589999974 2699999999999999999999999999999999999999999999
Q ss_pred CCccCCCCCH-HHHhcceEEEecCC---CCC-cccHHHHHccCCC-C-------CCHHHHHHHHHHHhHHHHHHhccccc
Q 047171 1040 DERNIKSYNL-RKLRSCIALVSQEP---TLF-AGTIRQNIVYGKE-V-------ATEAEIRKAAVLANAHEFISSTEDGY 1106 (1224)
Q Consensus 1040 dG~di~~~~~-~~lR~~i~~V~Qdp---~LF-~gTIreNl~~~~~-~-------~~deei~~al~~a~l~~~I~~lp~gl 1106 (1224)
+|.++...+. +.+|++++||||+| .+| ..|++||+.++.. . .+.++. ...+.+++..+ |+
T Consensus 312 ~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l 384 (501)
T PRK10762 312 DGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADE-----QQAVSDFIRLF--NI 384 (501)
T ss_pred CCEECCCCCHHHHHHCCCEEecCccccCCCcCCCcHHHHhhhhhhhhhcccccccCHHHH-----HHHHHHHHHhc--CC
Confidence 9999877665 34678899999997 344 4799999986421 0 111111 11233444433 34
Q ss_pred c-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCE
Q 047171 1107 D-TYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADN 1183 (1224)
Q Consensus 1107 d-t~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~ 1183 (1224)
. .........||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+
T Consensus 385 ~~~~~~~~~~~LSgGekqrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~~~~~~~d~ 464 (501)
T PRK10762 385 KTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMPEVLGMSDR 464 (501)
T ss_pred CCCCccCchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHhhCCE
Confidence 2 23455667899999999999999999999999999999999999999999999875 57899999999999866 999
Q ss_pred EEEEeCCEEEEecChhHHh
Q 047171 1184 IVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1184 I~vl~~G~Ive~Gt~~eLl 1202 (1224)
|++|++|++++.|+.+++.
T Consensus 465 v~~l~~G~i~~~~~~~~~~ 483 (501)
T PRK10762 465 ILVMHEGRISGEFTREQAT 483 (501)
T ss_pred EEEEECCEEEEEeccccCC
Confidence 9999999999999887763
No 76
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=8.1e-70 Score=667.24 Aligned_cols=220 Identities=25% Similarity=0.431 Sum_probs=176.3
Q ss_pred cEEEEEEEEECCC--CCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEEC-Ccc---CCCCC--
Q 047171 977 FIELKNVFFSYPS--RPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVD-ERN---IKSYN-- 1048 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~--~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~id-G~d---i~~~~-- 1048 (1224)
.|+++|++++|++ +.+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++ |.+ +...+
T Consensus 279 ~l~~~~l~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~~g~~~~~~~~~~~~ 358 (520)
T TIGR03269 279 IIKVRNVSKRYISVDRGVVKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLEPTSGEVNVRVGDEWVDMTKPGPD 358 (520)
T ss_pred eEEEeccEEEeccCCCCCceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEEecCCccccccccchh
Confidence 4999999999963 123469999999999999999999999999999999999999999999996 643 33332
Q ss_pred -HHHHhcceEEEecCCCCCc-ccHHHHHccCCC-CCCHHHHHHHHHHHhHHHHHHhccccccc-----ccCCCCCCCChH
Q 047171 1049 -LRKLRSCIALVSQEPTLFA-GTIRQNIVYGKE-VATEAEIRKAAVLANAHEFISSTEDGYDT-----YCGERGVQLSGG 1120 (1224)
Q Consensus 1049 -~~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~~-~~~deei~~al~~a~l~~~I~~lp~gldt-----~vge~G~~LSGG 1120 (1224)
...+|++++||||++.+|. .|++||+.++.. ....++.. ..+.+++..+ |++. .......+||||
T Consensus 359 ~~~~~~~~i~~v~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~~~~LSgG 431 (520)
T TIGR03269 359 GRGRAKRYIGILHQEYDLYPHRTVLDNLTEAIGLELPDELAR-----MKAVITLKMV--GFDEEKAEEILDKYPDELSEG 431 (520)
T ss_pred hHHHHhhhEEEEccCcccCCCCcHHHHHHHHHHcCCCHHHHH-----HHHHHHHHhC--CCCCccchhhhhCChhhCCHH
Confidence 2346788999999998886 599999975311 11111111 1122233322 2321 234455679999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt 1197 (1224)
||||++|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 432 q~qrv~laral~~~p~lLllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~~~~~~~d~i~~l~~G~i~~~g~ 511 (520)
T TIGR03269 432 ERHRVALAQVLIKEPRIVILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMDFVLDVCDRAALMRDGKIVKIGD 511 (520)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECC
Confidence 99999999999999999999999999999999999999988752 7899999999999876 99999999999999999
Q ss_pred hhHHhh
Q 047171 1198 QSSLLS 1203 (1224)
Q Consensus 1198 ~~eLl~ 1203 (1224)
++++.+
T Consensus 512 ~~~~~~ 517 (520)
T TIGR03269 512 PEEIVE 517 (520)
T ss_pred HHHHHh
Confidence 998865
No 77
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=3.9e-69 Score=582.33 Aligned_cols=454 Identities=30% Similarity=0.485 Sum_probs=349.7
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCCCCHHHHhc----ccEEecCC
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKKLQLKWLRS----QMGLVNQE 399 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~~~r~----~i~~v~Q~ 399 (1224)
.++++||.- ..|+++||||+||||||-..+.++|+++- -+|+|.++|.|+-..+...+|+ +|++++||
T Consensus 25 aVk~isf~i---~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQE 101 (534)
T COG4172 25 AVKGISFDI---EAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQE 101 (534)
T ss_pred eeccceeee---cCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEecc
Confidence 456777764 35789999999999999999999999874 4799999999999998888774 89999999
Q ss_pred CC--CCcc-cH----HHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhc--cccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 400 PI--LFST-SI----KENILIGKPGASMETVVKAAQAANVHDFIMKL--NDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 400 ~~--lf~~-ti----~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
|. |-+- || .|-|.+.+. .+ .++..+.+.+.++.. |+ -...+...+++|||||||||.||.||+.
T Consensus 102 PMtSLNPl~tIg~Qi~E~l~~Hrg-~~-----~~~Ar~r~lelL~~VgI~~-p~~rl~~yPHeLSGGqRQRVMIAMALan 174 (534)
T COG4172 102 PMTSLNPLHTIGKQLAEVLRLHRG-LS-----RAAARARALELLELVGIPE-PEKRLDAYPHELSGGQRQRVMIAMALAN 174 (534)
T ss_pred cccccCcHhHHHHHHHHHHHHHhc-cc-----HHHHHHHHHHHHHHcCCCc-hhhhhhhCCcccCcchhhHHHHHHHHcC
Confidence 95 2221 44 444444321 11 111222223333332 21 1235677899999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCc
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGG 547 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~ 547 (1224)
+|++||-||||.|||...+..|.+.|+++. .|..+++|||+|..+++ ||||+||.+|+++|+|+.+++.+.+ ..
T Consensus 175 ~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITHDL~iVr~~ADrV~VM~~G~ivE~~~t~~lF~~P---qH 251 (534)
T COG4172 175 EPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITHDLGIVRKFADRVYVMQHGEIVETGTTETLFAAP---QH 251 (534)
T ss_pred CCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEeccHHHHHHhhhhEEEEeccEEeecCcHHHHhhCC---CC
Confidence 999999999999999999999999998864 48999999999999987 9999999999999999988887652 12
Q ss_pred hHHHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCc
Q 047171 548 AYSKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDK 627 (1224)
Q Consensus 548 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (1224)
.|.+..-.
T Consensus 252 pYTr~Ll~------------------------------------------------------------------------ 259 (534)
T COG4172 252 PYTRKLLA------------------------------------------------------------------------ 259 (534)
T ss_pred hHHHHHHh------------------------------------------------------------------------
Confidence 22211100
Q ss_pred cCCCCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHH
Q 047171 628 NFHDNSHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLT 707 (1224)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 707 (1224)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 708 LIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLA 787 (1224)
Q Consensus 708 ~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~ 787 (1224)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhh
Q 047171 788 YTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKG 867 (1224)
Q Consensus 788 ~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~ 867 (1224)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 868 PKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIR 947 (1224)
Q Consensus 868 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 947 (1224)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCC--------CccceeceeEEEeCCcEEEEEcCCCCCh
Q 047171 948 TIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRP--------DQMIFKGLTLKIEAGKTVALVGQSGSGK 1019 (1224)
Q Consensus 948 ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~--------~~~vL~~isl~I~~Ge~vaIVG~SGsGK 1019 (1224)
.+|.-.+ . + .+....-.++.+||...||-++ ...+++++||+.++||++||||+|||||
T Consensus 260 -------aeP~g~~---~-p--~~~~~~~ll~~~~v~v~f~i~~g~~~r~~~~~~AVd~isl~L~~gqTlGlVGESGSGK 326 (534)
T COG4172 260 -------AEPSGDP---P-P--LPEDAPVLLEVEDLRVWFPIKGGFLRRTVDHLRAVDGISLTLRRGQTLGLVGESGSGK 326 (534)
T ss_pred -------cCCCCCC---C-C--CCCCCCceEEecceEEEEecCCccccccchheEEeccceeEecCCCeEEEEecCCCCc
Confidence 0000000 0 0 0001112456666666665221 1247899999999999999999999999
Q ss_pred HHHHHHHhcccCCCCceEEECCccCCCCCHHH---HhcceEEEecCCC--CC-cccHHHHHccC----CCCCC----HHH
Q 047171 1020 STIIGLIERFYDPQSGSVMVDERNIKSYNLRK---LRSCIALVSQEPT--LF-AGTIRQNIVYG----KEVAT----EAE 1085 (1224)
Q Consensus 1020 STL~~lL~rl~~p~~G~I~idG~di~~~~~~~---lR~~i~~V~Qdp~--LF-~gTIreNl~~~----~~~~~----dee 1085 (1224)
||+-.+|+|+.++. |+|..+|.++..++.+. +|+++-+|+|||+ |- ..||.+-|.-| .|..+ ++.
T Consensus 327 sTlG~allrL~~s~-G~I~F~G~~i~~~~~~~mrplR~~mQvVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~r 405 (534)
T COG4172 327 STLGLALLRLIPSQ-GEIRFDGQDIDGLSRKEMRPLRRRMQVVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQR 405 (534)
T ss_pred chHHHHHHhhcCcC-ceEEECCccccccChhhhhhhhhhceEEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHH
Confidence 99999999999865 99999999999998777 7899999999997 22 35777766544 23333 455
Q ss_pred HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--
Q 047171 1086 IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-- 1163 (1224)
Q Consensus 1086 i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-- 1163 (1224)
+.+|++.++++.-. ...-+..+|||||||||||||++-+|++++||||||+||-.-...|.+.|+++-
T Consensus 406 v~~aL~EVGLDp~~----------r~RYPhEFSGGQRQRIAIARAliLkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k 475 (534)
T COG4172 406 VIEALEEVGLDPAT----------RNRYPHEFSGGQRQRIAIARALILKPELILLDEPTSALDRSVQAQVLDLLRDLQQK 475 (534)
T ss_pred HHHHHHHcCCChhH----------hhcCCcccCcchhhHHHHHHHHhcCCcEEEecCCchHhhHHHHHHHHHHHHHHHHH
Confidence 77777777765432 124456799999999999999999999999999999999999999999998775
Q ss_pred CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchhHH
Q 047171 1164 VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYS 1212 (1224)
Q Consensus 1164 ~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~ 1212 (1224)
.+-+-++|+|+|..++. ||+|+||.+|+|||+|..++++++ +...|.+
T Consensus 476 ~~LsYLFISHDL~VvrAl~~~viVm~~GkiVE~G~~~~if~~-P~~~YT~ 524 (534)
T COG4172 476 HGLSYLFISHDLAVVRALCHRVIVMRDGKIVEQGPTEAVFAN-PQHEYTR 524 (534)
T ss_pred hCCeEEEEeccHHHHHHhhceEEEEeCCEEeeeCCHHHHhcC-CCcHHHH
Confidence 36799999999999987 999999999999999999999998 5666654
No 78
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=5e-69 Score=657.64 Aligned_cols=446 Identities=22% Similarity=0.380 Sum_probs=334.3
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCC--CCcEEEECCEecCCCCHHH-HhcccEEecCCCCCCcc
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDP--VKGNILLDGHKIKKLQLKW-LRSQMGLVNQEPILFST 405 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~--~~G~i~~~g~~~~~~~~~~-~r~~i~~v~Q~~~lf~~ 405 (1224)
.++||+|+.+ ++++++|+||||||||||+++|+|+++| ++|+|.++|+++...+... .++.||||+|++.+|..
T Consensus 16 il~~isl~i~---~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 16 ALDGIDLEVR---PGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eecceEEEEe---CCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 3555555543 5679999999999999999999999987 7999999999998776544 46689999999988865
Q ss_pred -cHHHHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhccccccccc-cCCCCCCChHHHHHHHHHHHhccCCCEEEE
Q 047171 406 -SIKENILIGKPG------ASMETVVKAAQAANVHDFIMKLNDGYETKV-GQFGVQLSGGQKQRIAIARALIRDPKILLL 477 (1224)
Q Consensus 406 -ti~~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~LSgGq~qriaiARal~~~~~ilil 477 (1224)
|++||+.++... ...++.. ..+++.++.+ |++... .....+||||||||++|||||+.+|++|||
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~iA~al~~~p~lllL 165 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMAYNAMY-----LRAKNLLREL--QLDADNVTRPVGDYGGGQQQLVEIAKALNKQARLLIL 165 (500)
T ss_pred CcHHHHHHhhccccccccccCHHHHH-----HHHHHHHHHc--CCCCCcccCchhhCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 999999886421 1112211 2234556665 444332 345788999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHH
Q 047171 478 DEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQL 555 (1224)
Q Consensus 478 DE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~ 555 (1224)
||||++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 166 DEPt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-------------- 231 (500)
T TIGR02633 166 DEPSSSLTEKETEILLDIIRDLKAHGVACVYISHKLNEVKAVCDTICVIRDGQHVATKDMSTMSED-------------- 231 (500)
T ss_pred eCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHHHHHHhCCEEEEEeCCeEeeecCcccCCHH--------------
Confidence 99999999999999999998763 58899999999999976 999999999999865422110000
Q ss_pred HHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccCCCCCCC
Q 047171 556 QQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNFHDNSHS 635 (1224)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (1224)
T Consensus 232 -------------------------------------------------------------------------------- 231 (500)
T TIGR02633 232 -------------------------------------------------------------------------------- 231 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred chHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 636 PSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQH 715 (1224)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 715 (1224)
.. +..+
T Consensus 232 -----~~-----------------------------------~~~~---------------------------------- 237 (500)
T TIGR02633 232 -----DI-----------------------------------ITMM---------------------------------- 237 (500)
T ss_pred -----HH-----------------------------------HHHH----------------------------------
Confidence 00 0000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 716 YNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVT 795 (1224)
Q Consensus 716 ~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 795 (1224)
+.. .
T Consensus 238 -----------------------------~~~-~---------------------------------------------- 241 (500)
T TIGR02633 238 -----------------------------VGR-E---------------------------------------------- 241 (500)
T ss_pred -----------------------------hCc-c----------------------------------------------
Confidence 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHH
Q 047171 796 WRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQ 875 (1224)
Q Consensus 796 ~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~ 875 (1224)
T Consensus 242 -------------------------------------------------------------------------------- 241 (500)
T TIGR02633 242 -------------------------------------------------------------------------------- 241 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Q 047171 876 SWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDR 955 (1224)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~ 955 (1224)
.. .. .
T Consensus 242 ----------------------------------~~---------------------------------------~~--~ 246 (500)
T TIGR02633 242 ----------------------------------IT---------------------------------------SL--Y 246 (500)
T ss_pred ----------------------------------cc---------------------------------------cc--c
Confidence 00 00 0
Q ss_pred CCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-CC
Q 047171 956 KSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-QS 1034 (1224)
Q Consensus 956 ~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-~~ 1034 (1224)
+.. . .+ ..+..|+++|++++|+..++.++|+|+||+|++||++||+||||||||||+++|+|+++| ++
T Consensus 247 ~~~--~-~~--------~~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~~ 315 (500)
T TIGR02633 247 PHE--P-HE--------IGDVILEARNLTCWDVINPHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPGKFE 315 (500)
T ss_pred ccc--c-cC--------CCCceEEEeCCcccccccccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCCCCC
Confidence 000 0 00 011258999999999532234599999999999999999999999999999999999995 89
Q ss_pred ceEEECCccCCCCCH-HHHhcceEEEecCC---CCCc-ccHHHHHccCCC--C-----CCHHHHHHHHHHHhHHHHHHhc
Q 047171 1035 GSVMVDERNIKSYNL-RKLRSCIALVSQEP---TLFA-GTIRQNIVYGKE--V-----ATEAEIRKAAVLANAHEFISST 1102 (1224)
Q Consensus 1035 G~I~idG~di~~~~~-~~lR~~i~~V~Qdp---~LF~-gTIreNl~~~~~--~-----~~deei~~al~~a~l~~~I~~l 1102 (1224)
|+|.++|.++...+. ..+|++++||||++ .+|. .|+++|+.++.. . ...++. ...+.++++.+
T Consensus 316 G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~ 390 (500)
T TIGR02633 316 GNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHGIVPILGVGKNITLSVLKSFCFKMRIDAAAE-----LQIIGSAIQRL 390 (500)
T ss_pred eEEEECCEECCCCCHHHHHhCCCEEcCcchhhCCcCCCCCHHHHhcchhhhhhccCCcCCHHHH-----HHHHHHHHHhc
Confidence 999999999865443 56788999999996 3555 699999987521 0 011111 11223334333
Q ss_pred cccccc-ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh
Q 047171 1103 EDGYDT-YCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK 1180 (1224)
Q Consensus 1103 p~gldt-~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~ 1180 (1224)
|+.. ........||||||||++||||++++|++|||||||++||+.+.+.+++.|+++. ++.|+|+|||+++.+..
T Consensus 391 --~l~~~~~~~~~~~LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~~~~~ 468 (500)
T TIGR02633 391 --KVKTASPFLPIGRLSGGNQQKAVLAKMLLTNPRVLILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELAEVLG 468 (500)
T ss_pred --CccCCCccCccccCCHHHHHHHHHHHHHhhCCCEEEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 2321 2334456799999999999999999999999999999999999999999998865 57899999999999876
Q ss_pred -cCEEEEEeCCEEEEecChhHH
Q 047171 1181 -ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1181 -aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||+|++|++|+++..++.+++
T Consensus 469 ~~d~v~~l~~G~i~~~~~~~~~ 490 (500)
T TIGR02633 469 LSDRVLVIGEGKLKGDFVNHAL 490 (500)
T ss_pred hCCEEEEEECCEEEEEEccccC
Confidence 999999999999987765443
No 79
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-69 Score=657.24 Aligned_cols=445 Identities=23% Similarity=0.375 Sum_probs=336.3
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCH-HHHhcccEEe
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQL-KWLRSQMGLV 396 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~v 396 (1224)
|+++||+++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|+++...+. +.+|++||||
T Consensus 5 l~~~~l~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~i~~v 84 (501)
T PRK11288 5 LSFDGIGKTFPGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAGVAII 84 (501)
T ss_pred EEEeeeEEEECCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCCEEEE
Confidence 4555555555421 3567999999999999999999999999999999999999875543 4567889999
Q ss_pred cCCCCCCcc-cHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 397 NQEPILFST-SIKENILIGKPG-----ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
+|++.+|+. |++||+.++... ...++.. ..+.++++.+ |++........+||||||||++|||||+.
T Consensus 85 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~laral~~ 157 (501)
T PRK11288 85 YQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLN-----YEAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAKALAR 157 (501)
T ss_pred EechhccCCCCHHHHHHhcccccccCCCCHHHHH-----HHHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHHHHHh
Confidence 999988875 999999986421 1122211 2234566666 55545567788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCch
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGGA 548 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~ 548 (1224)
+|++|||||||++||+.+.+.+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|++++.++..+-..
T Consensus 158 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~-------- 229 (501)
T PRK11288 158 NARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDDMAQVD-------- 229 (501)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCccccCC--------
Confidence 999999999999999999999999998764 58999999999999876 99999999999976431100000
Q ss_pred HHHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCcc
Q 047171 549 YSKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKN 628 (1224)
Q Consensus 549 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (1224)
. +
T Consensus 230 -------------------------------------------------------------------------~----~- 231 (501)
T PRK11288 230 -------------------------------------------------------------------------R----D- 231 (501)
T ss_pred -------------------------------------------------------------------------H----H-
Confidence 0 0
Q ss_pred CCCCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHH
Q 047171 629 FHDNSHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTL 708 (1224)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 708 (1224)
.+ ..
T Consensus 232 ------------~~-----------------------------------~~----------------------------- 235 (501)
T PRK11288 232 ------------QL-----------------------------------VQ----------------------------- 235 (501)
T ss_pred ------------HH-----------------------------------HH-----------------------------
Confidence 00 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 709 IANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAY 788 (1224)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~ 788 (1224)
.+ ... .
T Consensus 236 ---------------------------~~-------~~~-~--------------------------------------- 241 (501)
T PRK11288 236 ---------------------------AM-------VGR-E--------------------------------------- 241 (501)
T ss_pred ---------------------------Hh-------cCC-C---------------------------------------
Confidence 00 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhH
Q 047171 789 TLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGP 868 (1224)
Q Consensus 789 ~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~ 868 (1224)
T Consensus 242 -------------------------------------------------------------------------------- 241 (501)
T PRK11288 242 -------------------------------------------------------------------------------- 241 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 869 KKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRT 948 (1224)
Q Consensus 869 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~r 948 (1224)
..
T Consensus 242 -----------------------------------------~~------------------------------------- 243 (501)
T PRK11288 242 -----------------------------------------IG------------------------------------- 243 (501)
T ss_pred -----------------------------------------cc-------------------------------------
Confidence 00
Q ss_pred HHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhc
Q 047171 949 IFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIER 1028 (1224)
Q Consensus 949 i~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~r 1028 (1224)
.. ... .+.. +.+..++++|+++. .+++|+||+|++||++||+||||||||||+++|+|
T Consensus 244 --~~--~~~--~~~~---------~~~~~l~~~~~~~~-------~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G 301 (501)
T PRK11288 244 --DI--YGY--RPRP---------LGEVRLRLDGLKGP-------GLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYG 301 (501)
T ss_pred --cc--ccc--cccC---------CCCcEEEEeccccC-------CcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcC
Confidence 00 000 0000 01125899999742 38999999999999999999999999999999999
Q ss_pred ccCCCCceEEECCccCCCCCH-HHHhcceEEEecCCC---CC-cccHHHHHccCCCCC--------CHHHHHHHHHHHhH
Q 047171 1029 FYDPQSGSVMVDERNIKSYNL-RKLRSCIALVSQEPT---LF-AGTIRQNIVYGKEVA--------TEAEIRKAAVLANA 1095 (1224)
Q Consensus 1029 l~~p~~G~I~idG~di~~~~~-~~lR~~i~~V~Qdp~---LF-~gTIreNl~~~~~~~--------~deei~~al~~a~l 1095 (1224)
+++|++|+|.+||.++...+. +.+|++++|+||+|. +| ..|+.||+.++.... ...+-. ..+
T Consensus 302 ~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~ 376 (501)
T PRK11288 302 ATRRTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGIIPVHSVADNINISARRHHLRAGCLINNRWEA-----ENA 376 (501)
T ss_pred CCcCCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCCcCCCCHHHHhccccchhhcccccccChHHHH-----HHH
Confidence 999999999999998865443 456789999999973 55 479999998652110 111111 112
Q ss_pred HHHHHhcccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEcc
Q 047171 1096 HEFISSTEDGYD-TYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAH 1173 (1224)
Q Consensus 1096 ~~~I~~lp~gld-t~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaH 1173 (1224)
.+++..+ |++ ........+||||||||++||||++.+|++|||||||++||+.+.+.+.+.|+++. .|.|+|+|||
T Consensus 377 ~~~l~~~--~l~~~~~~~~~~~LSgGq~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsH 454 (501)
T PRK11288 377 DRFIRSL--NIKTPSREQLIMNLSGGNQQKAILGRWLSEDMKVILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSS 454 (501)
T ss_pred HHHHHhc--CcccCCccCccccCCHHHHHHHHHHHHHccCCCEEEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECC
Confidence 3334333 332 22344556899999999999999999999999999999999999999999998875 4789999999
Q ss_pred Cchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1174 RLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1174 rl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
+++.+.. ||++++|++|++++.|+++|..
T Consensus 455 d~~~~~~~~d~i~~l~~g~i~~~~~~~~~~ 484 (501)
T PRK11288 455 DLPEVLGVADRIVVMREGRIAGELAREQAT 484 (501)
T ss_pred CHHHHHhhCCEEEEEECCEEEEEEccccCC
Confidence 9999866 9999999999999999988764
No 80
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=7.9e-66 Score=677.75 Aligned_cols=216 Identities=19% Similarity=0.304 Sum_probs=184.4
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
..|+++|++++|+++ +.++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.++|.++.+ +.+..|++
T Consensus 1936 ~~L~v~nLsK~Y~~~-~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~ptsG~I~i~G~~i~~-~~~~~r~~ 2013 (2272)
T TIGR01257 1936 DILRLNELTKVYSGT-SSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILT-NISDVHQN 2013 (2272)
T ss_pred ceEEEEEEEEEECCC-CceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCCCccEEEECCEECcc-hHHHHhhh
Confidence 469999999999632 3569999999999999999999999999999999999999999999999999865 46678899
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCC--CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKE--VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~--~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
|||+||++.++. .|++|||.+... ..+.++ +.+.++..++.+ ........||||||||++||
T Consensus 2014 IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~-----------~~dk~~~~LSGGqKqRLslA 2082 (2272)
T TIGR01257 2014 MGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSL-----------YADRLAGTYSGGNKRKLSTA 2082 (2272)
T ss_pred EEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHH-----------HhcCChhhCCHHHHHHHHHH
Confidence 999999998886 699999976321 122333 233344444433 33344567999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|||+.+|+||||||||++||+.+.+.+++.|++.. +|+|+|++||+++.+.. ||||++|++|++++.|++++|.++
T Consensus 2083 ~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~mee~e~lcDrV~IL~~G~i~~~Gs~q~Lk~~ 2160 (2272)
T TIGR01257 2083 IALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSMEECEALCTRLAIMVKGAFQCLGTIQHLKSK 2160 (2272)
T ss_pred HHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHH
Confidence 99999999999999999999999999999999864 58999999999999976 999999999999999999999765
No 81
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.2e-68 Score=653.24 Aligned_cols=455 Identities=21% Similarity=0.378 Sum_probs=346.3
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHh-cccEE
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLR-SQMGL 395 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r-~~i~~ 395 (1224)
-|+++|++++|++. ++++++||+||||||||||+++|+|+++|++|+|.++|+++...+....+ ..+||
T Consensus 11 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 90 (510)
T PRK15439 11 LLCARSISKQYSGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLGIYL 90 (510)
T ss_pred eEEEEeEEEEeCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 37788888888643 35679999999999999999999999999999999999999877765554 57999
Q ss_pred ecCCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 396 VNQEPILFST-SIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 396 v~Q~~~lf~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
|+|++.++.. |++||+.++.... .+.. ..+.+.++.+ |++........+||||||||++|||||+.+|++
T Consensus 91 v~q~~~~~~~~tv~e~l~~~~~~~--~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~aL~~~p~l 161 (510)
T PRK15439 91 VPQEPLLFPNLSVKENILFGLPKR--QASM-----QKMKQLLAAL--GCQLDLDSSAGSLEVADRQIVEILRGLMRDSRI 161 (510)
T ss_pred EeccCccCCCCcHHHHhhcccccc--hHHH-----HHHHHHHHHc--CCCccccCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 9999988875 9999999875321 1111 1233455555 555556777889999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCchHHHH
Q 047171 475 LLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKM 552 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~ 552 (1224)
|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++... .....+
T Consensus 162 llLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~-----~~~~~~ 236 (510)
T PRK15439 162 LILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLSTD-----DIIQAI 236 (510)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCHH-----HHHHHH
Confidence 99999999999999999999998764 58999999999999876 999999999999998887775432 000000
Q ss_pred HHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccCCCC
Q 047171 553 VQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNFHDN 632 (1224)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 632 (1224)
.. . . .. . . . .
T Consensus 237 --------~~-~-----~------------~~----------~--~-------------~--------------~----- 246 (510)
T PRK15439 237 --------TP-A-----A------------RE----------K--S-------------L--------------S----- 246 (510)
T ss_pred --------hC-c-----c------------cc----------c--c-------------c--------------c-----
Confidence 00 0 0 00 0 0 0 0
Q ss_pred CCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHH
Q 047171 633 SHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANL 712 (1224)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 712 (1224)
..
T Consensus 247 -----------------------------------------------------~~------------------------- 248 (510)
T PRK15439 247 -----------------------------------------------------AS------------------------- 248 (510)
T ss_pred -----------------------------------------------------cc-------------------------
Confidence 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 713 IQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSL 792 (1224)
Q Consensus 713 ~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 792 (1224)
+ .
T Consensus 249 ---------------------------------~--~------------------------------------------- 250 (510)
T PRK15439 249 ---------------------------------Q--K------------------------------------------- 250 (510)
T ss_pred ---------------------------------c--c-------------------------------------------
Confidence 0 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHH
Q 047171 793 LVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKES 872 (1224)
Q Consensus 793 ~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~ 872 (1224)
T Consensus 251 -------------------------------------------------------------------------------- 250 (510)
T PRK15439 251 -------------------------------------------------------------------------------- 250 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 873 IKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTI 952 (1224)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~ 952 (1224)
. .
T Consensus 251 ----------------------------------------------------------------------------~-~- 252 (510)
T PRK15439 251 ----------------------------------------------------------------------------L-W- 252 (510)
T ss_pred ----------------------------------------------------------------------------c-c-
Confidence 0 0
Q ss_pred HccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC
Q 047171 953 LDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP 1032 (1224)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p 1032 (1224)
...+.. .. .. ++.+..|+++|++. .+|+|+||+|++||++||+||||||||||+++|.|+.+|
T Consensus 253 ~~~~~~-~~-~~-------~~~~~~l~~~~l~~--------~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p 315 (510)
T PRK15439 253 LELPGN-RR-QQ-------AAGAPVLTVEDLTG--------EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPA 315 (510)
T ss_pred cccccc-cc-cc-------CCCCceEEEeCCCC--------CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC
Confidence 000000 00 00 00112489999983 159999999999999999999999999999999999999
Q ss_pred CCceEEECCccCCCCCHHH-HhcceEEEecCC---CCCc-ccHHHHHccCC----CC-CCHHHHHHHHHHHhHHHHHHhc
Q 047171 1033 QSGSVMVDERNIKSYNLRK-LRSCIALVSQEP---TLFA-GTIRQNIVYGK----EV-ATEAEIRKAAVLANAHEFISST 1102 (1224)
Q Consensus 1033 ~~G~I~idG~di~~~~~~~-lR~~i~~V~Qdp---~LF~-gTIreNl~~~~----~~-~~deei~~al~~a~l~~~I~~l 1102 (1224)
++|+|.++|.++...+... +|++++||||++ .+|. .|+.+|+.... +. ....+.+ ..+.+++..+
T Consensus 316 ~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l~~~~t~~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~ 390 (510)
T PRK15439 316 RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGLYLDAPLAWNVCALTHNRRGFWIKPAREN-----AVLERYRRAL 390 (510)
T ss_pred CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCccCCCcHHHHHHhhhhhhhccccChHHHH-----HHHHHHHHHc
Confidence 9999999999998776654 467899999996 3665 59999985320 10 0111111 1223444443
Q ss_pred ccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh
Q 047171 1103 EDGYD-TYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK 1180 (1224)
Q Consensus 1103 p~gld-t~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~ 1180 (1224)
|++ .........||||||||++||||++.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+..
T Consensus 391 --~l~~~~~~~~~~~LSgG~kqrl~la~al~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~~i~~ 468 (510)
T PRK15439 391 --NIKFNHAEQAARTLSGGNQQKVLIAKCLEASPQLLIVDEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLEEIEQ 468 (510)
T ss_pred --CCCCCCccCccccCCcHHHHHHHHHHHHhhCCCEEEECCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHHHHHH
Confidence 343 23455567899999999999999999999999999999999999999999998875 47899999999999976
Q ss_pred -cCEEEEEeCCEEEEecChhHHhh
Q 047171 1181 -ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1181 -aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
||+|++|++|+++..|+++++..
T Consensus 469 ~~d~i~~l~~G~i~~~~~~~~~~~ 492 (510)
T PRK15439 469 MADRVLVMHQGEISGALTGAAINV 492 (510)
T ss_pred hCCEEEEEECCEEEEEEccccCCH
Confidence 99999999999999999988754
No 82
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.3e-66 Score=697.46 Aligned_cols=481 Identities=20% Similarity=0.239 Sum_probs=399.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 047171 63 PEKGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSIL 142 (1224)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 142 (1224)
+++.+++.+.+.+...++|.++++++++.|+.||++ . ++|++++|+++|++.+++.+...+..++..++.+++.++
T Consensus 943 ~~~~~~~~~~~~~~~~~l~~~l~~~ll~~p~~ff~~---~-~~G~ilnRfs~Di~~id~~l~~~~~~~~~~~~~~i~~l~ 1018 (1490)
T TIGR01271 943 FFRGLPLVHTLLTVSKRLHEQMLHSVLQAPMAVLNT---M-KAGRILNRFTKDMAIIDDMLPLTLFDFIQLTLIVLGAIF 1018 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHhCC---C-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445666778889999999999999999999999998 4 999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHH
Q 047171 143 VAFLLSWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNM 222 (1224)
Q Consensus 143 ~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~ 222 (1224)
++++++|.+++++++++++++++..++.+..+...+......+.+.+.+.|.++|+.+||+|++++.+.++|.+..+...
T Consensus 1019 ~i~~~~p~l~l~~~~l~~~~~~~~~~~~~~~r~l~~~~~~~~s~l~~~~~Etl~Gl~tIraf~~~~~~~~~~~~~~~~~~ 1098 (1490)
T TIGR01271 1019 VVSVLQPYIFIAAIPVAVIFIMLRAYFLRTSQQLKQLESEARSPIFSHLITSLKGLWTIRAFGRQSYFETLFHKALNLHT 1098 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhcCHHHHHHhCCcHHHHHHHHHHHHHHH
Confidence 99999998776555554455555556666667777777788889999999999999999999999999999999888655
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHH--HHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 223 ELGIKQGLTKGLLLGSM-GMTYGA--WAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAAT 299 (1224)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 299 (1224)
+..........+..... .+..+. .+++++++.. ..+.|.+..++.|+.....++..+...+..+..+..|.+
T Consensus 1099 ~~~~~~~~~~~wl~~~~~~i~~~~~~~~~~l~~~~~-----~~~~g~~g~~l~~~~~l~~~l~~l~~~~~~le~~~~s~e 1173 (1490)
T TIGR01271 1099 ANWFLYLSTLRWFQMRIDIIFVFFFIAVTFIAIGTN-----QDGEGEVGIILTLAMNILSTLQWAVNSSIDVDGLMRSVS 1173 (1490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44443333333332222 111111 1112222222 234455555556666667778888888889999999999
Q ss_pred HHHHHhccCCCCCCCcccc--------------ccc--ccccccEEEEeEEEECCCC------------CCCCEEEEEcC
Q 047171 300 RIFEMIDRVPVINSEDEIG--------------KTL--AYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGS 351 (1224)
Q Consensus 300 ri~~~l~~~~~~~~~~~~~--------------~~~--~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~ 351 (1224)
|+.++++.+++.....+.. ..+ .+..|.|+|+||+|+|++. ++|+++||||+
T Consensus 1174 Ri~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~wp~~g~I~f~nVs~~Y~~~~~~vL~~is~~I~~GekvaIvGr 1253 (1490)
T TIGR01271 1174 RVFKFIDLPQEEPRPSGGGGKYQLSTVLVIENPHAQKCWPSGGQMDVQGLTAKYTEAGRAVLQDLSFSVEGGQRVGLLGR 1253 (1490)
T ss_pred HHHHHhcCCCccccccccccccccccccccccCCCCCCCCCCCeEEEEEEEEEeCCCCcceeeccEEEEcCCCEEEEECC
Confidence 9999998765532111000 000 1235789999999999742 25679999999
Q ss_pred CCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhc
Q 047171 352 SGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAAN 431 (1224)
Q Consensus 352 sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~ 431 (1224)
||||||||+++|+|+|+ ++|+|++||+|+++++.+.+|++|+||||||+||+|||||||.... ..++++++++++.++
T Consensus 1254 SGsGKSTLl~lL~rl~~-~~G~I~IdG~di~~i~~~~lR~~is~IpQdp~LF~GTIR~NLdp~~-~~tdeei~~aL~~~~ 1331 (1490)
T TIGR01271 1254 TGSGKSTLLSALLRLLS-TEGEIQIDGVSWNSVTLQTWRKAFGVIPQKVFIFSGTFRKNLDPYE-QWSDEEIWKVAEEVG 1331 (1490)
T ss_pred CCCCHHHHHHHHhhhcC-CCcEEEECCEEcccCCHHHHHhceEEEeCCCccCccCHHHHhCccc-CCCHHHHHHHHHHCC
Confidence 99999999999999997 7999999999999999999999999999999999999999997653 478999999999999
Q ss_pred HHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCC
Q 047171 432 VHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHR 511 (1224)
Q Consensus 432 ~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~ 511 (1224)
+++++.++|+|+||.+||+|.+|||||||||||||||+++|+|||||||||+||++|++.|++.|++..+++|+|+||||
T Consensus 1332 L~~~i~~lp~GLdt~v~e~G~nLSgGQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~~~~TvI~IaHR 1411 (1490)
T TIGR01271 1332 LKSVIEQFPDKLDFVLVDGGYVLSNGHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSFSNCTVILSEHR 1411 (1490)
T ss_pred CHHHHHhCccccccccccCCCcCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999998889999999999
Q ss_pred cchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHHHHH
Q 047171 512 LSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQS 558 (1224)
Q Consensus 512 l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~ 558 (1224)
++++.+||+|+||++|+|+|.|+|++|++. ++.|+++++.+..
T Consensus 1412 l~ti~~~DrIlvL~~G~ivE~g~p~~Ll~~----~~~f~~l~~~~~~ 1454 (1490)
T TIGR01271 1412 VEALLECQQFLVIEGSSVKQYDSIQKLLNE----TSLFKQAMSAADR 1454 (1490)
T ss_pred HHHHHhCCEEEEEECCEEEEeCCHHHHHcC----CcHHHHHHHHhCh
Confidence 999999999999999999999999999975 7899999876543
No 83
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-68 Score=649.10 Aligned_cols=442 Identities=21% Similarity=0.338 Sum_probs=339.4
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCH-HHHhcccEEecCCCCCCc-c
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQL-KWLRSQMGLVNQEPILFS-T 405 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~v~Q~~~lf~-~ 405 (1224)
.-++||+|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+. +.+++.++||+|++.++. .
T Consensus 12 ~il~~vs~~i~---~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 88 (491)
T PRK10982 12 KALDNVNLKVR---PHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQR 88 (491)
T ss_pred EeeeeeeEEEc---CCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEEEecccccccCC
Confidence 46889999874 567999999999999999999999999999999999999876654 445778999999998775 4
Q ss_pred cHHHHHhcCCCC-----CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCC
Q 047171 406 SIKENILIGKPG-----ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEA 480 (1224)
Q Consensus 406 ti~~ni~~g~~~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ 480 (1224)
|++||+.++... .+.++.. ..+++.++.+ |++........+||||||||++|||||+.+|++||||||
T Consensus 89 tv~~~l~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~~~p~lllLDEP 161 (491)
T PRK10982 89 SVMDNMWLGRYPTKGMFVDQDKMY-----RDTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFSYNAKIVIMDEP 161 (491)
T ss_pred CHHHHhhcccccccccccCHHHHH-----HHHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHHhCCCEEEEeCC
Confidence 999999986421 1112111 2234556666 666666778899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCchHHHHHHHHHH
Q 047171 481 TSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMVQLQQS 558 (1224)
Q Consensus 481 ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~~~~~~ 558 (1224)
|++||+.+...+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++... +..+
T Consensus 162 t~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~---------~~~~---- 228 (491)
T PRK10982 162 TSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLTMD---------KIIA---- 228 (491)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCCHH---------HHHH----
Confidence 99999999999999998864 58999999999999875 999999999999987754432100 0000
Q ss_pred hhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccCCCCCCCchH
Q 047171 559 AMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNFHDNSHSPSS 638 (1224)
Q Consensus 559 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 638 (1224)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 639 LLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNF 718 (1224)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 718 (1224)
T Consensus 229 -------------------------------------------------------------------------------- 228 (491)
T PRK10982 229 -------------------------------------------------------------------------------- 228 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 719 AIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRV 798 (1224)
Q Consensus 719 ~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 798 (1224)
.+ +.. .
T Consensus 229 -----------------~~-------~~~-~------------------------------------------------- 234 (491)
T PRK10982 229 -----------------MM-------VGR-S------------------------------------------------- 234 (491)
T ss_pred -----------------HH-------hCC-C-------------------------------------------------
Confidence 00 000 0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHH
Q 047171 799 AIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWF 878 (1224)
Q Consensus 799 ~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~ 878 (1224)
T Consensus 235 -------------------------------------------------------------------------------- 234 (491)
T PRK10982 235 -------------------------------------------------------------------------------- 234 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCC
Q 047171 879 SGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSE 958 (1224)
Q Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~ 958 (1224)
. . . ..++.
T Consensus 235 -------------------------------~------------------------------------~---~--~~~~~ 242 (491)
T PRK10982 235 -------------------------------L------------------------------------T---Q--RFPDK 242 (491)
T ss_pred -------------------------------c------------------------------------c---c--ccccc
Confidence 0 0 0 00000
Q ss_pred CCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEE
Q 047171 959 IDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVM 1038 (1224)
Q Consensus 959 ~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~ 1038 (1224)
. .+ +.+..|+++|++++| .++|+|+||+|++||++||+|+||||||||+++|.|+.+|++|+|.
T Consensus 243 --~-~~--------~~~~~i~~~~l~~~~-----~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~ 306 (491)
T PRK10982 243 --E-NK--------PGEVILEVRNLTSLR-----QPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIREKSAGTIT 306 (491)
T ss_pred --c-CC--------CCCcEEEEeCccccc-----CcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCcCCccEEE
Confidence 0 00 011258999999875 2489999999999999999999999999999999999999999999
Q ss_pred ECCccCCCCCHH-HHhcceEEEecCCC---CCc-ccHHHH-----HccCCCC---CCHHHHHHHHHHHhHHHHHHhcccc
Q 047171 1039 VDERNIKSYNLR-KLRSCIALVSQEPT---LFA-GTIRQN-----IVYGKEV---ATEAEIRKAAVLANAHEFISSTEDG 1105 (1224)
Q Consensus 1039 idG~di~~~~~~-~lR~~i~~V~Qdp~---LF~-gTIreN-----l~~~~~~---~~deei~~al~~a~l~~~I~~lp~g 1105 (1224)
+||.++...+.. .+|+.++|+||++. +|. .|+.+| +.+.... .+..+.. ..+.+++..+ |
T Consensus 307 ~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~ 379 (491)
T PRK10982 307 LHGKKINNHNANEAINHGFALVTEERRSTGIYAYLDIGFNSLISNIRNYKNKVGLLDNSRMK-----SDTQWVIDSM--R 379 (491)
T ss_pred ECCEECCCCCHHHHHHCCCEEcCCchhhCCcccCCcHHHheehhhhhhhcccccccCcHHHH-----HHHHHHHHhc--C
Confidence 999999876654 45788999999963 555 577766 3321111 1111211 1223344443 2
Q ss_pred cc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cC
Q 047171 1106 YD-TYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-AD 1182 (1224)
Q Consensus 1106 ld-t~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD 1182 (1224)
+. -.......+||||||||++||||++++|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||
T Consensus 380 l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~~~~~~~d 459 (491)
T PRK10982 380 VKTPGHRTQIGSLSGGNQQKVIIGRWLLTQPEILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMPELLGITD 459 (491)
T ss_pred ccCCCcccccccCCcHHHHHHHHHHHHhcCCCEEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChHHHHhhCC
Confidence 31 12345566899999999999999999999999999999999999999999998865 58999999999999866 99
Q ss_pred EEEEEeCCEEEEecChhHH
Q 047171 1183 NIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1183 ~I~vl~~G~Ive~Gt~~eL 1201 (1224)
++++|++|+++..++.+++
T Consensus 460 ~v~~l~~g~i~~~~~~~~~ 478 (491)
T PRK10982 460 RILVMSNGLVAGIVDTKTT 478 (491)
T ss_pred EEEEEECCEEEEEEccccC
Confidence 9999999999988876543
No 84
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=8e-66 Score=635.12 Aligned_cols=524 Identities=19% Similarity=0.231 Sum_probs=400.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhHHHH-HHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 647 AIEWKRTLLGCLGSAGSGAIYPSY-AYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHL 725 (1224)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 725 (1224)
++.++.++++++++++..++.... +++...+++.... . .. ....++++.++..++.++..+.....+.++
T Consensus 9 ~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~----~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (547)
T PRK10522 9 RQYRWPFISVMALSLASAALGIGLIAFINQRLIETADT----S---LL--VLPEFLGLLLLLMAVTLGSQLALTTLGHHF 79 (547)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc----c---ch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344445555555555555555443 4444555543211 0 00 111122233334556778888899999999
Q ss_pred HHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 726 VQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLLVTWRVAIVMIAV 805 (1224)
Q Consensus 726 ~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~ 805 (1224)
..++|.+++++++++|++||+ ++++|++++|+++|++.+...+. .+..++..++.+++.++++++++|.+++++++.
T Consensus 80 ~~~lR~~l~~~ll~~~~~~~~--~~~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~ 156 (547)
T PRK10522 80 VYRLRSEFIKRILDTHVERIE--QLGSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVTAIW 156 (547)
T ss_pred HHHHHHHHHHHHHhCCHHHHh--ccCccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 999999999999999999999 67899999999999999998765 467778888888889999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccH---HHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 047171 806 QPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQ---DRILDLFRETMKGPKKESIKQSWFSGIG 882 (1224)
Q Consensus 806 ~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 882 (1224)
+|+.+++.+...+..++..++.++..++..+.+.|.++|+++++ ++.+ +.+.+++.+..+...+...+........
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (547)
T PRK10522 157 MAVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSA 235 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHH
Confidence 99888777777777777777778888899999999999999995 4443 4667888888877776666655554443
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCC
Q 047171 883 LFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEIDPE 962 (1224)
Q Consensus 883 ~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~~~ 962 (1224)
..+...+..+..++.++++... ..+ +.+.+..+..+......|+..+...+.++..+..+.+|+.++.+.+++.+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~ 312 (547)
T PRK10522 236 VNWSNIMMLGAIGLVFYMANSL-GWA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFP 312 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-hcC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccc
Confidence 3333333333333333333322 112 2333333333333455789999999999999999999999987544321111
Q ss_pred CCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCc
Q 047171 963 DPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDER 1042 (1224)
Q Consensus 963 ~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~ 1042 (1224)
++ .+.+..+.|+++||+|+|++ ++++|+|+||+|+|||++|||||||||||||+++|+|+|+|++|+|.+||+
T Consensus 313 ~~-----~~~~~~~~i~~~~v~f~y~~--~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~ 385 (547)
T PRK10522 313 RP-----QAFPDWQTLELRNVTFAYQD--NGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGK 385 (547)
T ss_pred cc-----cccCcCceEEEEEEEEEeCC--CCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCE
Confidence 10 11112357999999999974 346999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1043 NIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1043 di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
|+++++.+++|++++||||||++|++|+++| + +..++++++++++.+++.+++. .|+|. .+|.+||||||
T Consensus 386 ~~~~~~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~-----~~G~~LSgGq~ 455 (547)
T PRK10522 386 PVTAEQPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAHKLE-LEDGR-----ISNLKLSKGQK 455 (547)
T ss_pred ECCCCCHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCchhhh-ccccC-----CCCCCCCHHHH
Confidence 9999999999999999999999999999999 3 4567888888887777666553 23332 14789999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEe-cChh
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQ-GTQS 1199 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~-Gt~~ 1199 (1224)
||++||||++++|+|||||||||+||+++++.+.+.+.+.. .++|+|+||||+++++.||+|++|++|+++|. |++.
T Consensus 456 qRl~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~~ 535 (547)
T PRK10522 456 KRLALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEER 535 (547)
T ss_pred HHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCch
Confidence 99999999999999999999999999999999999997654 48999999999999999999999999999987 5665
Q ss_pred HHhh
Q 047171 1200 SLLS 1203 (1224)
Q Consensus 1200 eLl~ 1203 (1224)
+-..
T Consensus 536 ~~~~ 539 (547)
T PRK10522 536 DAAS 539 (547)
T ss_pred hhhh
Confidence 5443
No 85
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=3.4e-67 Score=639.85 Aligned_cols=441 Identities=21% Similarity=0.301 Sum_probs=330.5
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEec
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVN 397 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 397 (1224)
|+++|++++|++. .++++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|++
T Consensus 4 l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~~G~i~~~~~~~~~~~~~~~~~~i~~~~ 83 (490)
T PRK10938 4 LQISQGTFRLSDTKTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLLSGERQSQFSHITRLSFEQLQKLVSDEW 83 (490)
T ss_pred EEEEeEEEEcCCeeecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCceEEECCcccccCCHHHHHHHhceec
Confidence 5667777777532 256799999999999999999999999999999999998887777667777899999
Q ss_pred CCCCC--C-------cccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHh
Q 047171 398 QEPIL--F-------STSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARAL 468 (1224)
Q Consensus 398 Q~~~l--f-------~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal 468 (1224)
|++.+ + ..|++||+.++.. ..++ +++.++.+ |++........+||||||||++|||||
T Consensus 84 q~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~---------~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al 150 (490)
T PRK10938 84 QRNNTDMLSPGEDDTGRTTAEIIQDEVK--DPAR---------CEQLAQQF--GITALLDRRFKYLSTGETRKTLLCQAL 150 (490)
T ss_pred cCcchhhcccchhhccccHHHhcccchh--HHHH---------HHHHHHHc--CCHhhhhCCcccCCHHHHHHHHHHHHH
Confidence 98743 2 3588888765310 1112 23344444 555556777889999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCC
Q 047171 469 IRDPKILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEG 546 (1224)
Q Consensus 469 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~ 546 (1224)
+.+|++|||||||++||+++.+.+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|+++..|+.+++....
T Consensus 151 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~~---- 226 (490)
T PRK10938 151 MSEPDLLILDEPFDGLDVASRQQLAELLASLHQSGITLVLVLNRFDEIPDFVQFAGVLADCTLAETGEREEILQQA---- 226 (490)
T ss_pred HcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEeCCHHHHhcch----
Confidence 99999999999999999999999999998864 47899999999999876 9999999999999988777654310
Q ss_pred chHHHHHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccC
Q 047171 547 GAYSKMVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQND 626 (1224)
Q Consensus 547 ~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 626 (1224)
...++... . .
T Consensus 227 -~~~~~~~~----------------------------~-------------~---------------------------- 236 (490)
T PRK10938 227 -LVAQLAHS----------------------------E-------------Q---------------------------- 236 (490)
T ss_pred -hhhhhhhh----------------------------h-------------c----------------------------
Confidence 00000000 0 0
Q ss_pred ccCCCCCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHH
Q 047171 627 KNFHDNSHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFL 706 (1224)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 706 (1224)
T Consensus 237 -------------------------------------------------------------------------------- 236 (490)
T PRK10938 237 -------------------------------------------------------------------------------- 236 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 707 TLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASL 786 (1224)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~ 786 (1224)
+ ... ..
T Consensus 237 -----------------------------------~--~~~-~~------------------------------------ 242 (490)
T PRK10938 237 -----------------------------------L--EGV-QL------------------------------------ 242 (490)
T ss_pred -----------------------------------c--Ccc-cc------------------------------------
Confidence 0 000 00
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhh
Q 047171 787 AYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMK 866 (1224)
Q Consensus 787 ~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~ 866 (1224)
T Consensus 243 -------------------------------------------------------------------------------- 242 (490)
T PRK10938 243 -------------------------------------------------------------------------------- 242 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 867 GPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAI 946 (1224)
Q Consensus 867 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ 946 (1224)
T Consensus 243 -------------------------------------------------------------------------------- 242 (490)
T PRK10938 243 -------------------------------------------------------------------------------- 242 (490)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHH
Q 047171 947 RTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLI 1026 (1224)
Q Consensus 947 ~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL 1026 (1224)
....+...... . ......|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|
T Consensus 243 -------~~~~~~~~~~~-----~-~~~~~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l 306 (490)
T PRK10938 243 -------PEPDEPSARHA-----L-PANEPRIVLNNGVVSYND---RPILHNLSWQVNPGEHWQIVGPNGAGKSTLLSLI 306 (490)
T ss_pred -------Ccccccccccc-----c-CCCCceEEEeceEEEECC---eeEEeeceEEEcCCCEEEEECCCCCCHHHHHHHH
Confidence 00000000000 0 001125999999999963 3589999999999999999999999999999999
Q ss_pred hcccCC-CCceEEECCccCCC-CCHHHHhcceEEEecCCCCCc---ccHHHHHccCCC-------CCCH---HHHHHHHH
Q 047171 1027 ERFYDP-QSGSVMVDERNIKS-YNLRKLRSCIALVSQEPTLFA---GTIRQNIVYGKE-------VATE---AEIRKAAV 1091 (1224)
Q Consensus 1027 ~rl~~p-~~G~I~idG~di~~-~~~~~lR~~i~~V~Qdp~LF~---gTIreNl~~~~~-------~~~d---eei~~al~ 1091 (1224)
+|+.+| ++|+|.++|.++.. .+...+|++++|+||++.++. .|+++++.++.. .... +++.++++
T Consensus 307 ~G~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 386 (490)
T PRK10938 307 TGDHPQGYSNDLTLFGRRRGSGETIWDIKKHIGYVSSSLHLDYRVSTSVRNVILSGFFDSIGIYQAVSDRQQKLAQQWLD 386 (490)
T ss_pred cCCCCcccCCeEEEecccCCCCCCHHHHHhhceEECHHHHhhcccCCcHHHHHHhccccccccccCCCHHHHHHHHHHHH
Confidence 998875 69999999987632 233457889999999987642 467777653210 0111 22333333
Q ss_pred HHhHHHHHHhccccccc-ccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-C-CeE
Q 047171 1092 LANAHEFISSTEDGYDT-YCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV-G-RTC 1168 (1224)
Q Consensus 1092 ~a~l~~~I~~lp~gldt-~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~-~Tv 1168 (1224)
.. |++. .......+||||||||++||||++++|++|||||||++||+++.+.+.+.|+++.+ + .|+
T Consensus 387 ~~-----------~l~~~~~~~~~~~LSgGq~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~L~~l~~~~~~tv 455 (490)
T PRK10938 387 IL-----------GIDKRTADAPFHSLSWGQQRLALIVRALVKHPTLLILDEPLQGLDPLNRQLVRRFVDVLISEGETQL 455 (490)
T ss_pred Hc-----------CCchhhccCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCcEE
Confidence 33 3332 33445567999999999999999999999999999999999999999999998753 4 469
Q ss_pred EEEccCchhhhh--cCEEEEEeCCEEEEec
Q 047171 1169 VVVAHRLSTIQK--ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1169 I~IaHrl~ti~~--aD~I~vl~~G~Ive~G 1196 (1224)
|+|||+++.+.. ||++++|++|+|++.-
T Consensus 456 iivsHd~~~~~~~~~d~v~~l~~G~i~~~~ 485 (490)
T PRK10938 456 LFVSHHAEDAPACITHRLEFVPDGDIYRYV 485 (490)
T ss_pred EEEecchhhhhhhhheeEEEecCCceEEee
Confidence 999999999964 8999999999998754
No 86
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.5e-65 Score=648.10 Aligned_cols=483 Identities=23% Similarity=0.332 Sum_probs=412.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 047171 63 PEKGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSIL 142 (1224)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 142 (1224)
+++.+.+...+.+...++...+++++++-|++|||. +++|+|+||+++|++.+++.+...+..++..++.+++.++
T Consensus 876 ~~rs~~~~~~~l~aS~~Lh~~ml~~Ilrapm~FFdt----TP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~ 951 (1381)
T KOG0054|consen 876 LLRSFLFAKGGLKASRKLHDKLLNSILRAPMSFFDT----TPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILV 951 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcCC----CCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 556777888899999999999999999999999998 4999999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHH
Q 047171 143 VAFLLSWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNM 222 (1224)
Q Consensus 143 ~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~ 222 (1224)
++.+..|++.++++.+..++..+..++.+-.+...+-.....+-..+++.|+++|+-|||+|+.|+.+.+++.+..+.+.
T Consensus 952 vi~~~~P~fli~~~pl~v~~~~~~~~Y~~tsReLkRLesitRSPi~sh~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~ 1031 (1381)
T KOG0054|consen 952 VISYVTPWFLIAIIPLGVIYYFVQRYYLATSRELKRLESITRSPIYSHFSETLQGLSTIRAFGKEERFIQENDELIDENS 1031 (1381)
T ss_pred HhhHHhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhcccchHHHhHHHHhcCcceeeeccccHHHHHHHHHHhhhhH
Confidence 99999999888888888888888888888888888888888899999999999999999999999999999998888877
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 223 ELGIKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRI 301 (1224)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri 301 (1224)
+...-..-...++.--. .+..+.+..+..+. .+...+..++|.+-..+.|.+.....+..+......+.....|.|||
T Consensus 1032 ~~~f~~~~a~RWla~Rle~ig~~~v~~~al~~-vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv 1110 (1381)
T KOG0054|consen 1032 RAFFLSISANRWLAVRLELLGNLVVLIAALFA-VLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERV 1110 (1381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHH
Confidence 66544332222222222 22222211111111 11122226678877778899988888888888899999999999999
Q ss_pred HHHhccCCCCCCCccc--ccccccccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCC
Q 047171 302 FEMIDRVPVINSEDEI--GKTLAYLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFY 367 (1224)
Q Consensus 302 ~~~l~~~~~~~~~~~~--~~~~~~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~ 367 (1224)
.|+.+.+++.+...+. +++.-+.+|+|+|+|++.+|.+. +++++|||||++|||||||+++|.|+.
T Consensus 1111 ~eY~~~~~E~p~~~~~~~pp~~WP~~G~I~f~~~~~RYrp~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~aLFRl~ 1190 (1381)
T KOG0054|consen 1111 LEYTDIPSEAPLEIEESRPPPSWPSKGEIEFEDLSLRYRPNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLILALFRLV 1190 (1381)
T ss_pred HHHhcCCCCCCCCCcCCCCCCCCCCCCeEEEEEeEEEeCCCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHHHHHHhc
Confidence 9999876651111111 12223457999999999999643 256799999999999999999999999
Q ss_pred CCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccc
Q 047171 368 DPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKV 447 (1224)
Q Consensus 368 ~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~ 447 (1224)
+|.+|+|.|||.||.++.+++||++++++||||.||+||+|.|+-=- .+.+|+++|+|++.|++.++++++|.|+|+.|
T Consensus 1191 e~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsGTvR~NLDPf-~e~sD~~IW~ALe~~~Lk~~v~~~p~~Ld~~v 1269 (1381)
T KOG0054|consen 1191 EPAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSGTVRFNLDPF-DEYSDDEIWEALERCQLKDVVSSLPGGLDSEV 1269 (1381)
T ss_pred CccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecCccccccCcc-cccCHHHHHHHHHHhChHHHHhhCCcCCCcee
Confidence 99999999999999999999999999999999999999999998421 25789999999999999999999999999999
Q ss_pred cCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCc
Q 047171 448 GQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSG 527 (1224)
Q Consensus 448 ~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G 527 (1224)
.|+|.|+|-||||.+||||||+++++||+|||||+++|++|...||+.|++.-+++|||.||||++|+.++|||+|||+|
T Consensus 1270 ~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~dcTVltIAHRl~TVmd~DrVlVld~G 1349 (1381)
T KOG0054|consen 1270 SEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFKDCTVLTIAHRLNTVMDSDRVLVLDAG 1349 (1381)
T ss_pred cCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhcCCeEEEEeeccchhhhcCeEEEeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEeecChHHHHhhccCCCchHHHHHH
Q 047171 528 RVIESGSHDVLMQMNNGEGGAYSKMVQ 554 (1224)
Q Consensus 528 ~i~~~g~~~~l~~~~~~~~~~y~~~~~ 554 (1224)
+|+|.|++++|++++ ++.|+++..
T Consensus 1350 ~v~EfdsP~~Ll~~~---~S~f~~~l~ 1373 (1381)
T KOG0054|consen 1350 RVVEFDSPAELLSDK---DSLFSSLLK 1373 (1381)
T ss_pred eEeecCChHHHHhCC---cchHHHHHH
Confidence 999999999999874 566664443
No 87
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=4.1e-66 Score=686.68 Aligned_cols=212 Identities=23% Similarity=0.411 Sum_probs=180.3
Q ss_pred cEEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC---CCCceEEECCccCCCCCHHHH
Q 047171 977 FIELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD---PQSGSVMVDERNIKSYNLRKL 1052 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~~~~l 1052 (1224)
.++++||+++|+.++ ++++|+|||++|+|||++||+||||||||||+++|+|..+ |++|+|.+||.++. ..+
T Consensus 759 ~l~~~nl~~~~~~~~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G~~~~----~~~ 834 (1394)
T TIGR00956 759 IFHWRNLTYEVKIKKEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNGRPLD----SSF 834 (1394)
T ss_pred eEEEEeeEEEecCCCCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECC----hhh
Confidence 479999999996322 3569999999999999999999999999999999999997 68899999999884 257
Q ss_pred hcceEEEecCCC-CCcccHHHHHccCC----C-CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1053 RSCIALVSQEPT-LFAGTIRQNIVYGK----E-VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1053 R~~i~~V~Qdp~-LF~gTIreNl~~~~----~-~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
|++++||||++. ++..||||||.++. + ..++++ +.++++..++ .+..|+.+|+.|.+||||||
T Consensus 835 ~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L-------~~~~d~~v~~~~~~LSgGqr 907 (1394)
T TIGR00956 835 QRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEM-------ESYADAVVGVPGEGLNVEQR 907 (1394)
T ss_pred hcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCC-------hhhCCCeeCCCCCCCCHHHh
Confidence 899999999875 55689999998742 1 223333 3344444433 34578999998889999999
Q ss_pred HHHHHHHHHccCCC-EEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhh--hhcCEEEEEeCC-EEEEecC
Q 047171 1123 QRIALARAVLKNPM-ILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTI--QKADNIVVIKNG-KVVEQGT 1197 (1224)
Q Consensus 1123 QRlaLARAll~~p~-ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti--~~aD~I~vl~~G-~Ive~Gt 1197 (1224)
||++|||||+.+|+ ||+||||||+||+.+...|++.|+++. +|+|+|+++|+++.. ..||++++|++| ++++.|+
T Consensus 908 qRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~G~ 987 (1394)
T TIGR00956 908 KRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYFGD 987 (1394)
T ss_pred hHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEECC
Confidence 99999999999997 999999999999999999999999874 689999999999973 569999999997 9999998
Q ss_pred hh
Q 047171 1198 QS 1199 (1224)
Q Consensus 1198 ~~ 1199 (1224)
+.
T Consensus 988 ~~ 989 (1394)
T TIGR00956 988 LG 989 (1394)
T ss_pred cc
Confidence 74
No 88
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1.7e-65 Score=571.62 Aligned_cols=509 Identities=23% Similarity=0.297 Sum_probs=432.5
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHhhhcCC-ChHHHHHH-H---HHH-------HHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 20 LFGTVGSIGDGMMTPLTMYILSMVINELGTS-DISISIEA-V---DKV-------PEKGMCWTRTAERQASRIRMEYLKS 87 (1224)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~-~~~~~~~~-~---~~~-------~~~~~~~~~~~~~~~~~lR~~~~~~ 87 (1224)
+...+++.+..++....|+++=++-|.+.+. +...+... + ..+ +++.....+.+.++...+...+|..
T Consensus 26 ~~v~lfS~~INiL~L~~~lyMLQVyDRVL~S~s~~TLv~Ltvlal~ly~~~glLd~iR~~~l~Rig~~lD~~L~~~v~~a 105 (580)
T COG4618 26 IGVGLFSAVINLLALTGPLYMLQVYDRVLPSRSVPTLVMLTVLALGLYAFQGLLDAIRSRVLVRIGERLDRQLNGPVFAA 105 (580)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHhhhccCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3344555555666777778888888987643 22222211 1 111 5667777889999999999999999
Q ss_pred HHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 047171 88 VLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAE-KIPNCLAHLTSFIGSILVAFLLSWRLALAALPFSLLFIVPG 166 (1224)
Q Consensus 88 l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~~~~~~~~ 166 (1224)
..+.+..-- ..|+=. ..-+|.++++.|++. ....++...++.+ .+.++|.+++++.++.++...+++.+.
T Consensus 106 ~~~~~l~~~-------~~g~~~-Q~LrDL~qvR~Fltg~g~~A~fDaPW~P~-yl~v~fl~Hp~lG~~a~~ga~iLv~la 176 (580)
T COG4618 106 SFSAPLLRR-------GSGDGL-QPLRDLDQVRQFLTGTGLTAFFDAPWMPL-YLAVIFLFHPWLGLIALAGAIILVVLA 176 (580)
T ss_pred HHhhHHhhc-------CCCccc-cchhhHHHHHHHHcCCCcchhcCCchHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 876665422 222222 234699999999987 4455555556555 566788899999999998888888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
Q 047171 167 IVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSM-GMTYGA 245 (1224)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 245 (1224)
++-.+..++-.++..+...+.+..++-...|..+|++.|..+...++|.+.+.++.....+.+-..+.+.... .+=...
T Consensus 177 ~ln~~~t~~p~~eA~~~~~~~~~~~~a~~RNAEvi~AMGM~~~l~~rW~~~~~~~L~~~~~asd~~~~~~~~Sr~~Rm~l 256 (580)
T COG4618 177 LLNERATRKPLKEASEASIRANQLADATLRNAEVIEAMGMLGNLAKRWGRFNAAYLSAQERASDRNGAFGALSRALRMAL 256 (580)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHhhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 8888888888889999999999999999999999999999999999999999999999888888877777777 666677
Q ss_pred HHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCccccccccccc
Q 047171 246 WAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSEDEIGKTLAYLR 325 (1224)
Q Consensus 246 ~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~~~~~~~~~~~ 325 (1224)
...++..|+|++++|++|+|.+++....+.....|+-.....+..+..++.|.+|+.++|...|...+ .-+.+..+
T Consensus 257 Qs~iLg~GA~Lvi~ge~t~G~mIA~SIl~gRaLaPid~aI~~Wkq~~~Ar~s~~Rl~~lL~~~p~~~~----~m~LP~P~ 332 (580)
T COG4618 257 QSAVLGLGAWLVIKGEITPGMMIAGSILSGRALAPIDLAIANWKQFVAARQSYKRLNELLAELPAAAE----RMPLPAPQ 332 (580)
T ss_pred HHHHHhcceeeEEcCcCCcchhhHHHHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccC----CCCCCCCC
Confidence 77889999999999999999999988888888899999999999999999999999999987665322 13345556
Q ss_pred ccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhccc
Q 047171 326 GEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQM 393 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 393 (1224)
|.+.++++++.=|+. ++|+.+|||||||||||||.++|.|.++|++|.|++||-|++.++.+.+-++|
T Consensus 333 g~L~Ve~l~~~PPg~~~pil~~isF~l~~G~~lgIIGPSgSGKSTLaR~lvG~w~p~~G~VRLDga~l~qWd~e~lG~hi 412 (580)
T COG4618 333 GALSVERLTAAPPGQKKPILKGISFALQAGEALGIIGPSGSGKSTLARLLVGIWPPTSGSVRLDGADLRQWDREQLGRHI 412 (580)
T ss_pred ceeeEeeeeecCCCCCCcceecceeEecCCceEEEECCCCccHHHHHHHHHcccccCCCcEEecchhhhcCCHHHhcccc
Confidence 778888888765533 24568999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 047171 394 GLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPK 473 (1224)
Q Consensus 394 ~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ 473 (1224)
||.|||..||+|||+|||+=-.++++.+.+.+|++.+++||.|.++|+||||.+|+.|..|||||||||+||||||.||.
T Consensus 413 GYLPQdVeLF~GTIaeNIaRf~~~~d~~kIieAA~lAgvHelIl~lP~GYdT~iG~~G~~LSgGQRQRIaLARAlYG~P~ 492 (580)
T COG4618 413 GYLPQDVELFDGTIAENIARFGEEADPEKVIEAARLAGVHELILRLPQGYDTRIGEGGATLSGGQRQRIALARALYGDPF 492 (580)
T ss_pred CcCcccceecCCcHHHHHHhccccCCHHHHHHHHHHcChHHHHHhCcCCccCccCCCCCCCCchHHHHHHHHHHHcCCCc
Confidence 99999999999999999985556788999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 474 ILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 474 ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+++||||-|+||.+.|..+.++|...+ +|.|+|+||||.+.+..+|+|+||++|++...|+.+|.+++
T Consensus 493 lvVLDEPNsNLD~~GE~AL~~Ai~~~k~rG~~vvviaHRPs~L~~~Dkilvl~~G~~~~FG~r~eVLa~ 561 (580)
T COG4618 493 LVVLDEPNSNLDSEGEAALAAAILAAKARGGTVVVIAHRPSALASVDKILVLQDGRIAAFGPREEVLAK 561 (580)
T ss_pred EEEecCCCCCcchhHHHHHHHHHHHHHHcCCEEEEEecCHHHHhhcceeeeecCChHHhcCCHHHHHHH
Confidence 999999999999999999999998865 68999999999999999999999999999999999999876
No 89
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.5e-66 Score=632.99 Aligned_cols=203 Identities=27% Similarity=0.360 Sum_probs=171.5
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
..|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|. ++
T Consensus 318 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~~-----------~~ 383 (530)
T PRK15064 318 NALEVENLTKGFDN---GPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELEPDSGTVKWSEN-----------AN 383 (530)
T ss_pred ceEEEEeeEEeeCC---ceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCc-----------eE
Confidence 36999999999963 35999999999999999999999999999999999999999999999983 57
Q ss_pred eEEEecCCC--CC-cccHHHHHccCC-CCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHH
Q 047171 1056 IALVSQEPT--LF-AGTIRQNIVYGK-EVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAV 1131 (1224)
Q Consensus 1056 i~~V~Qdp~--LF-~gTIreNl~~~~-~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAl 1131 (1224)
++|+||++. ++ ..|+++|+.+.. ....++++.+.++..++. .........+||||||||++||||+
T Consensus 384 i~~~~q~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LSgGq~qrv~la~al 453 (530)
T PRK15064 384 IGYYAQDHAYDFENDLTLFDWMSQWRQEGDDEQAVRGTLGRLLFS----------QDDIKKSVKVLSGGEKGRMLFGKLM 453 (530)
T ss_pred EEEEcccccccCCCCCcHHHHHHHhccCCccHHHHHHHHHHcCCC----------hhHhcCcccccCHHHHHHHHHHHHH
Confidence 999999984 44 369999997532 222344555555554431 1122345567999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEE-EecChhHHhhc
Q 047171 1132 LKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVV-EQGTQSSLLSM 1204 (1224)
Q Consensus 1132 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Iv-e~Gt~~eLl~~ 1204 (1224)
+++|+||||||||++||+.+.+.+.+.|++. +.|+|+|||+++.+.. ||+|++|++|+++ ..|+++++++.
T Consensus 454 ~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vsHd~~~~~~~~d~i~~l~~g~i~~~~g~~~~~~~~ 526 (530)
T PRK15064 454 MQKPNVLVMDEPTNHMDMESIESLNMALEKY--EGTLIFVSHDREFVSSLATRIIEITPDGVVDFSGTYEEYLRS 526 (530)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHhCCEEEEEECCeEEEcCCCHHHHHHH
Confidence 9999999999999999999999999999886 4699999999999876 9999999999998 88999998864
No 90
>PRK10522 multidrug transporter membrane component/ATP-binding component; Provisional
Probab=100.00 E-value=4.2e-64 Score=619.88 Aligned_cols=503 Identities=19% Similarity=0.189 Sum_probs=386.4
Q ss_pred HhhccchhHHHHHHHHHHHHHHHhHHHH-HHHHHHHHHhhhcCCChHHHHH----HHH---HHHHHHHHHHHHHHHHHHH
Q 047171 8 FRYADGKDKLLLLFGTVGSIGDGMMTPL-TMYILSMVINELGTSDISISIE----AVD---KVPEKGMCWTRTAERQASR 79 (1224)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~id~~~~~~~~~~~~----~~~---~~~~~~~~~~~~~~~~~~~ 79 (1224)
++|.+++++ .++++++++++.+++... .|++.+.++|.... +...+.. .+. ..++..++..+.+.++..+
T Consensus 5 ~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~i~~~lid~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (547)
T PRK10522 5 RLVWRQYRW-PFISVMALSLASAALGIGLIAFINQRLIETADT-SLLVLPEFLGLLLLLMAVTLGSQLALTTLGHHFVYR 82 (547)
T ss_pred HHHHHhhhH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555544 345555666666655554 35677888886532 1111110 011 1156777788899999999
Q ss_pred HHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Q 047171 80 IRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILVAFLLSWRLALAALPFS 159 (1224)
Q Consensus 80 lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~l~~~ 159 (1224)
+|.++|+|++++|+++|++ . ++|++++|+++|++.++.++. .++.++.+++.++++++++++++|.+++++++++
T Consensus 83 lR~~l~~~ll~~~~~~~~~---~-~~g~~lsrl~~dv~~i~~~~~-~l~~~~~~~~~~i~~~~~l~~~~~~l~li~l~~~ 157 (547)
T PRK10522 83 LRSEFIKRILDTHVERIEQ---L-GSASLLASLTSDVRNITIAFV-RLPELVQGIILTLGSAAYLAWLSPKMLLVTAIWM 157 (547)
T ss_pred HHHHHHHHHHhCCHHHHhc---c-CccchHHHHHhhHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9999999999999999998 5 999999999999999998776 4778888999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcch---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 160 LLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGE---HQTLKRFSLALRKNMELGIKQGLTKGLLL 236 (1224)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (1224)
|+.+++..++.++.++..++.++..+++++.+.|.++|+++++ ++.+ +.+.++|++..++..+...+.........
T Consensus 158 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (547)
T PRK10522 158 AVTIWGGFVLVARVYKHMATLRETEDKLYNDYQTVLEGRKELT-LNRERAEYVFENEYEPDAQEYRHHIIRADTFHLSAV 236 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHhhh-ccHHHHHHHHHHHHhHHHHHHHhhhHHHHHHHHHHH
Confidence 9998888899999999999999999999999999999999996 4443 45678888888877776666555444333
Q ss_pred HHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCCc
Q 047171 237 GSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAATRIFEMIDRVPVINSED 315 (1224)
Q Consensus 237 ~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ri~~~l~~~~~~~~~~ 315 (1224)
... .+..+...+.+++++... .+ +.+.+..+.++......|+..+...+..++++..+.+|+.++++.+++.+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~pl~~l~~~~~~~~~~~~a~~ri~~l~~~~~~~~~~~ 313 (547)
T PRK10522 237 NWSNIMMLGAIGLVFYMANSLG-WA--DTNVAATYSLTLLFLRTPLLSAVGALPTLLSAQVAFNKLNKLALAPYKAEFPR 313 (547)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh-cC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccc
Confidence 322 222222222333333221 12 33333334444444567999999999999999999999999986543211111
Q ss_pred ccccccccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC
Q 047171 316 EIGKTLAYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL 384 (1224)
Q Consensus 316 ~~~~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~ 384 (1224)
....+ ..+.|+++||+|+|++. ++|+++|||||||||||||+++|+|+|+|++|+|.+||+|++++
T Consensus 314 --~~~~~-~~~~i~~~~v~f~y~~~~~~l~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~~~~G~i~~~g~~~~~~ 390 (547)
T PRK10522 314 --PQAFP-DWQTLELRNVTFAYQDNGFSVGPINLTIKRGELLFLIGGNGSGKSTLAMLLTGLYQPQSGEILLDGKPVTAE 390 (547)
T ss_pred --ccccC-cCceEEEEEEEEEeCCCCeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCCC
Confidence 11111 13579999999999753 35779999999999999999999999999999999999999999
Q ss_pred CHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccC---CCCCCChHHHHH
Q 047171 385 QLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQ---FGVQLSGGQKQR 461 (1224)
Q Consensus 385 ~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~---~g~~LSgGq~qr 461 (1224)
+.+++|++|+||+|||++|++|++|| + ++.+++++.++++..++.+ ++..++ +|.+||||||||
T Consensus 391 ~~~~~~~~i~~v~q~~~lf~~ti~~n---~-~~~~~~~~~~~~~~~~l~~---------~~~~~~~~~~G~~LSgGq~qR 457 (547)
T PRK10522 391 QPEDYRKLFSAVFTDFHLFDQLLGPE---G-KPANPALVEKWLERLKMAH---------KLELEDGRISNLKLSKGQKKR 457 (547)
T ss_pred CHHHHhhheEEEecChhHHHHhhccc---c-CchHHHHHHHHHHHcCCch---------hhhccccCCCCCCCCHHHHHH
Confidence 99999999999999999999999999 3 3455555555555444433 333333 388999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhccCEEEEEeCceEEee-cChHH
Q 047171 462 IAIARALIRDPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQSGRVIES-GSHDV 537 (1224)
Q Consensus 462 iaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~-g~~~~ 537 (1224)
++||||++++|+|||||||||+||+++++.+.+.+.+.. +++|+|+||||+++++.||+|++|++|+++|. |++.+
T Consensus 458 l~lARal~~~~~ililDE~ts~LD~~~~~~i~~~l~~~~~~~~~tvi~itH~~~~~~~~d~i~~l~~G~i~e~~~~~~~ 536 (547)
T PRK10522 458 LALLLALAEERDILLLDEWAADQDPHFRREFYQVLLPLLQEMGKTIFAISHDDHYFIHADRLLEMRNGQLSELTGEERD 536 (547)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEEechHHHHhCCEEEEEECCEEEEecCCchh
Confidence 999999999999999999999999999999999987543 48999999999999999999999999999986 44443
No 91
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.6e-64 Score=620.87 Aligned_cols=202 Identities=26% Similarity=0.384 Sum_probs=165.3
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
..|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+++ ++ +
T Consensus 323 ~~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~p~~G~i~~~~-~~----------~ 388 (556)
T PRK11819 323 KVIEAENLSKSFGD---RLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQPDSGTIKIGE-TV----------K 388 (556)
T ss_pred eEEEEEeEEEEECC---eeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECC-ce----------E
Confidence 35999999999963 3599999999999999999999999999999999999999999999954 21 5
Q ss_pred eEEEecCC-CCCc-ccHHHHHccCCCCC----CHHHHHHHHHHHhHHHHHHhccccccc-ccCCCCCCCChHHHHHHHHH
Q 047171 1056 IALVSQEP-TLFA-GTIRQNIVYGKEVA----TEAEIRKAAVLANAHEFISSTEDGYDT-YCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1056 i~~V~Qdp-~LF~-gTIreNl~~~~~~~----~deei~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSGGQrQRlaLA 1128 (1224)
++|+||++ .++. .|++||+.++.... .+.+..++++.. |+.. ........||||||||++||
T Consensus 389 i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~LSgG~~qrv~la 457 (556)
T PRK11819 389 LAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRF-----------NFKGGDQQKKVGVLSGGERNRLHLA 457 (556)
T ss_pred EEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhC-----------CCChhHhcCchhhCCHHHHHHHHHH
Confidence 99999997 5554 59999998753211 122222222222 2321 12344567999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeC-CEEE-EecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKN-GKVV-EQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~-G~Iv-e~Gt~~eLl~~ 1204 (1224)
||++.+|++|||||||++||+.+...+.+.|++. . .|+|+|||+++.+.. ||+|++|++ |++. ..|+++++++.
T Consensus 458 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~-~-~tvi~vtHd~~~~~~~~d~i~~l~~~g~~~~~~g~~~~~~~~ 534 (556)
T PRK11819 458 KTLKQGGNVLLLDEPTNDLDVETLRALEEALLEF-P-GCAVVISHDRWFLDRIATHILAFEGDSQVEWFEGNFQEYEED 534 (556)
T ss_pred HHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC-C-CeEEEEECCHHHHHHhCCEEEEEECCCeEEEecCCHHHHHHH
Confidence 9999999999999999999999999999999886 3 499999999999876 999999986 8887 47888888764
No 92
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=5.8e-64 Score=617.98 Aligned_cols=200 Identities=27% Similarity=0.431 Sum_probs=163.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+.+|++|+|.+++ ++ +|
T Consensus 322 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~~-~~----------~i 387 (552)
T TIGR03719 322 VIEAENLSKGFGD---KLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQPDSGTIKIGE-TV----------KL 387 (552)
T ss_pred EEEEeeEEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCeEEEECC-ce----------EE
Confidence 5999999999963 3599999999999999999999999999999999999999999999954 21 59
Q ss_pred EEEecCCC-CCc-ccHHHHHccCCCC--CC--HHHHHHHHHHHhHHHHHHhccccccc-ccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPT-LFA-GTIRQNIVYGKEV--AT--EAEIRKAAVLANAHEFISSTEDGYDT-YCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~-LF~-gTIreNl~~~~~~--~~--deei~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+|+||++. ++. .|++||+.++... .. +.+..+ .+..+ |++. ........||||||||++|||
T Consensus 388 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~---------~l~~~--~l~~~~~~~~~~~LSgGe~qrv~la~ 456 (552)
T TIGR03719 388 AYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRA---------YVGRF--NFKGSDQQKKVGQLSGGERNRVHLAK 456 (552)
T ss_pred EEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHH---------HHHhC--CCChhHhcCchhhCCHHHHHHHHHHH
Confidence 99999973 554 6999999876321 11 112222 22222 3322 234455679999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeC-CEEE-EecChhHHhh
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKN-GKVV-EQGTQSSLLS 1203 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~-G~Iv-e~Gt~~eLl~ 1203 (1224)
|++.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|||+++.+.. ||+|++|++ |++. ..|++++..+
T Consensus 457 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~~viivsHd~~~~~~~~d~i~~l~~~~~~~~~~g~~~~~~~ 531 (552)
T TIGR03719 457 TLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA--GCAVVISHDRWFLDRIATHILAFEGDSHVEWFEGNYSEYEE 531 (552)
T ss_pred HHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHhCCEEEEEECCCeEEEeCCCHHHHHH
Confidence 9999999999999999999999999999999873 499999999999876 999999997 6876 4588877654
No 93
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=8.2e-62 Score=606.44 Aligned_cols=531 Identities=16% Similarity=0.154 Sum_probs=438.9
Q ss_pred HHHHHHHhhHHHH-----HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 047171 639 LLRLLRMSAIEWK-----RTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLI 713 (1224)
Q Consensus 639 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 713 (1224)
+++++++..+.|+ .+++.+++.++...+....|++.+.+++.....+..........++++++++.++..+..++
T Consensus 79 ~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~~ 158 (659)
T TIGR00954 79 LDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKYL 158 (659)
T ss_pred HHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455665555544 56677777777788888899999999987764332222222334555566667777788888
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 714 QHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLL 793 (1224)
Q Consensus 714 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1224)
..++......++..++|++.+++....++.+||. .+|++.+|+++|++.+.+.+...+..++..++.+++.++.++.
T Consensus 159 ~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~---~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~L~~ 235 (659)
T TIGR00954 159 LKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS---RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFKLLT 235 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC---CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888888889999999999999988999999983 5799999999999999999999999999999998888877775
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHH
Q 047171 794 -VTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKES 872 (1224)
Q Consensus 794 -~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~ 872 (1224)
.+|.+++++++.+|+..++.....+...+...+.++..+.......|.++|+++|++|+.|+.+.+++.+..++..+..
T Consensus 236 ~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~~~~ 315 (659)
T TIGR00954 236 ALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLVEHL 315 (659)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHh-c----CCcCHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHH
Q 047171 873 IKQSWFSGIGLFSSQFLTTA--SITLTFWYAGRIMN-Q----GLVSPKQLFQAFF-L---LMSTGKNIADAGSMTSDIAK 941 (1224)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~-~----g~~t~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~ 941 (1224)
.+...+......+..++... ..++.++.|...+. . |.+|.+.+++.+. + +.....|+..+.....++.+
T Consensus 316 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~i~~ 395 (659)
T TIGR00954 316 NLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRDMTR 395 (659)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99888888888888777643 23333333343332 2 6788888766333 2 34557788999999999999
Q ss_pred HHHHHHHHHHHHccCCCCCC------CCCC-CC-------------CCCCCCCcccEEEEEEEEECCCCCCccceeceeE
Q 047171 942 GSSAIRTIFTILDRKSEIDP------EDPK-AS-------------EDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTL 1001 (1224)
Q Consensus 942 ~~~a~~ri~~~~~~~~~~~~------~~~~-~~-------------~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl 1001 (1224)
+..+.+|+.++++.+++... ..+. .. ........+.|+++||+|+|++ +.++|+|+||
T Consensus 396 ~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~--~~~il~~isl 473 (659)
T TIGR00954 396 LAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPN--GDVLIESLSF 473 (659)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCC--CCeeeecceE
Confidence 99999999999976443210 0000 00 0000112356999999999973 3469999999
Q ss_pred EEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCC---
Q 047171 1002 KIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGK--- 1078 (1224)
Q Consensus 1002 ~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~--- 1078 (1224)
+|++||++||+||||||||||+++|+|+++|++|+|.+|+ |++++||||+|.+|++|++|||.++.
T Consensus 474 ~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~~ 542 (659)
T TIGR00954 474 EVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSSE 542 (659)
T ss_pred EECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCChh
Confidence 9999999999999999999999999999999999999874 57899999999999999999999864
Q ss_pred ----CCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHH
Q 047171 1079 ----EVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENL 1154 (1224)
Q Consensus 1079 ----~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~ 1154 (1224)
+..++++++++++.+++++++.. |.||||..+ .+.+||||||||++||||++++|++||||||||+||+++++.
T Consensus 543 ~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~~ 620 (659)
T TIGR00954 543 DMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEGY 620 (659)
T ss_pred hhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 34578899999999999999987 999999986 567999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeC
Q 047171 1155 VQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKN 1189 (1224)
Q Consensus 1155 I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~ 1189 (1224)
+.+.+++. ++|+|+||||+++++.||+|++|+.
T Consensus 621 l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 621 MYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 99999874 8999999999999999999999973
No 94
>TIGR00954 3a01203 Peroxysomal Fatty Acyl CoA Transporter (FAT) Family protei.
Probab=100.00 E-value=5.6e-62 Score=607.94 Aligned_cols=504 Identities=14% Similarity=0.093 Sum_probs=415.4
Q ss_pred chHHHHhhccchhH----HHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCChHHHHH----HHHH-----H------H
Q 047171 3 TKGGLFRYADGKDK----LLLLFGTVGSIGDGMMTPLTMYILSMVINELGTSDISISIE----AVDK-----V------P 63 (1224)
Q Consensus 3 ~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~id~~~~~~~~~~~~----~~~~-----~------~ 63 (1224)
.++++++|++|+++ ..+++.+++.++.+++....|++.+.++|.+...+...+.. .+.. + |
T Consensus 78 ~~~~l~~~~~p~~~~~~~~~l~~~~~~~~~~t~~~l~~~~l~~~iid~l~~~~~~~f~~~l~~~~l~~~~~~~~~~~~~~ 157 (659)
T TIGR00954 78 KLDFLLKILIPRVFCKETGLLILIAFLLVSRTYLSVYVATLDGQIESSIVRRSPRNFAWILFKWFLIAPPASFINSAIKY 157 (659)
T ss_pred HHHHHHHHHcCcccchHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35678888887754 24566777777788888889999999999876543322211 0000 0 4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q 047171 64 EKGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSILV 143 (1224)
Q Consensus 64 ~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 143 (1224)
+..++......++..++|.+++++....+..+||+ ++|++.+|+++|++.+.+.+...+..++..++.+++.+++
T Consensus 158 ~~~~~~~~~r~~l~~~l~~~~~~~~~~~~~~~~d~-----~~g~~~srlt~Dv~~i~~~~~~~~~~l~~~~~~ii~~~~~ 232 (659)
T TIGR00954 158 LLKELKLRFRVRLTRYLYSKYLSGFTFYKVSNLDS-----RIQNPDQLLTQDVEKFCDSVVELYSNLTKPILDVILYSFK 232 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCceEEeccCCC-----CCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555667777888888888888888888888884 6799999999999999999999999999999999988887
Q ss_pred HHH-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHHHHH
Q 047171 144 AFL-LSWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQTLKRFSLALRKNM 222 (1224)
Q Consensus 144 ~~~-~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~~~~~~~~~~~~~~ 222 (1224)
++. ++|.+++++++.+|+.+++..++.+++.+..++.++..++.++...|.++|+++||+|+.|+.+.++|++..++..
T Consensus 233 L~~~~~~~l~l~~l~~~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~g~~~I~~~~~e~~e~~~~~~~~~~l~ 312 (659)
T TIGR00954 233 LLTALGSVGPAGLFAYLFATGVVLTKLRPPIGKLTVEEQALEGEYRYVHSRLIMNSEEIAFYQGNKVEKETVMSSFYRLV 312 (659)
T ss_pred HHHhcchHHHHHHHHHHHHHHHHHHHHccchhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 876 9999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH-HHHHH--HHHHHHHHHHHHHH-h----cCccHHHHHH-HHHH---HHHHHHHHHHHHHHHHH
Q 047171 223 ELGIKQGLTKGLLLGSM-GMTYG--AWAFQSWVGSVLVT-E----RGEKGGLVFV-AGIC---TILGGVGIMSALPNLSF 290 (1224)
Q Consensus 223 ~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~g~~~~~-~----~~~~~g~~~~-~~~~---~~~~~~~~~~~~~~~~~ 290 (1224)
+...+..+..+...++. ++... ..++.++.|...+. . |.+|.|.+++ |+.+ +.....|+..+...+..
T Consensus 313 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~~~~~~g~~t~g~~~~~f~~~~~~~~~l~~~~~~l~~~~~~ 392 (659)
T TIGR00954 313 EHLNLIIKFRFSYGFLDNIVAKYTWSAVGLVAVSIPIFDKTHPAFLEMSEEELMQEFYNNGRLLLKAADALGRLMLAGRD 392 (659)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999988888877776 44332 22333334443332 2 6789888776 4444 44557899999999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCC--------c-ccc-------------cccccccccEEEEeEEEECCCC--------
Q 047171 291 ISQATTAATRIFEMIDRVPVINSE--------D-EIG-------------KTLAYLRGEIEFKDVDFSYPTR-------- 340 (1224)
Q Consensus 291 ~~~~~~s~~ri~~~l~~~~~~~~~--------~-~~~-------------~~~~~~~~~i~~~~v~f~y~~~-------- 340 (1224)
++++.++.+|++++++.+++.+.. . ..+ .......+.|+++||+|+|++.
T Consensus 393 i~~~~~~~~Ri~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nv~~~~~~~~~il~~is 472 (659)
T TIGR00954 393 MTRLAGFTARVDTLLQVLDDVKSGNFKRPRVEEIESGREGGRNSNLVPGRGIVEYQDNGIKFENIPLVTPNGDVLIESLS 472 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccccccccccccccccccccccccccccccCCCeEEEEeeEEECCCCCeeeecce
Confidence 999999999999999764432100 0 000 0011123569999999999632
Q ss_pred ---CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCC--
Q 047171 341 ---PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGK-- 415 (1224)
Q Consensus 341 ---~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~-- 415 (1224)
+++++++|+||||||||||+++|+|+++|++|+|.+++ |++++||+|+|++|++|++|||.++.
T Consensus 473 l~i~~Ge~~~IvG~nGsGKSTLl~lL~Gl~~~~~G~i~~~~-----------~~~i~~v~Q~~~l~~~tv~eni~~~~~~ 541 (659)
T TIGR00954 473 FEVPSGNHLLICGPNGCGKSSLFRILGELWPVYGGRLTKPA-----------KGKLFYVPQRPYMTLGTLRDQIIYPDSS 541 (659)
T ss_pred EEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEeecC-----------CCcEEEECCCCCCCCcCHHHHHhcCCCh
Confidence 25679999999999999999999999999999999874 56899999999999999999999974
Q ss_pred -----CCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHH
Q 047171 416 -----PGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESER 490 (1224)
Q Consensus 416 -----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~ 490 (1224)
++.+++++.++++.+++++++.+ |.|+||..+ .+.+||||||||++||||++++|+++|||||||+||+++++
T Consensus 542 ~~~~~~~~~~~~i~~~l~~~~l~~~~~~-~~g~~~~~~-~~~~LSgGqkQRl~iARal~~~p~illLDEpts~LD~~~~~ 619 (659)
T TIGR00954 542 EDMKRRGLSDKDLEQILDNVQLTHILER-EGGWSAVQD-WMDVLSGGEKQRIAMARLFYHKPQFAILDECTSAVSVDVEG 619 (659)
T ss_pred hhhhccCCCHHHHHHHHHHcCCHHHHhh-cCCcccccc-cccCCCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHH
Confidence 34567889999999999999888 999999876 57899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeC
Q 047171 491 IVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQS 526 (1224)
Q Consensus 491 ~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~ 526 (1224)
.+.+.+++. |+|+|+||||+++++.||+|++|+.
T Consensus 620 ~l~~~l~~~--~~tvI~isH~~~~~~~~d~il~l~~ 653 (659)
T TIGR00954 620 YMYRLCREF--GITLFSVSHRKSLWKYHEYLLYMDG 653 (659)
T ss_pred HHHHHHHHc--CCEEEEEeCchHHHHhCCEEEEEeC
Confidence 999998764 8999999999999999999999973
No 95
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.9e-63 Score=613.44 Aligned_cols=200 Identities=27% Similarity=0.384 Sum_probs=164.2
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+++. .++
T Consensus 312 ~l~~~~l~~~y~~---~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~~~~-----------~~i 377 (638)
T PRK10636 312 LLKMEKVSAGYGD---RIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELAPVSGEIGLAKG-----------IKL 377 (638)
T ss_pred eEEEEeeEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCC-----------EEE
Confidence 5999999999963 46999999999999999999999999999999999999999999999742 269
Q ss_pred EEEecCC--CCCc-ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1057 ALVSQEP--TLFA-GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1057 ~~V~Qdp--~LF~-gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
+|+||++ .++. .|+.+++....+...++++.+.++..++.. .........||||||||++||||+++
T Consensus 378 gy~~Q~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~l~~----------~~~~~~~~~LSgGekqRl~La~~l~~ 447 (638)
T PRK10636 378 GYFAQHQLEFLRADESPLQHLARLAPQELEQKLRDYLGGFGFQG----------DKVTEETRRFSGGEKARLVLALIVWQ 447 (638)
T ss_pred EEecCcchhhCCccchHHHHHHHhCchhhHHHHHHHHHHcCCCh----------hHhcCchhhCCHHHHHHHHHHHHHhc
Confidence 9999985 3443 488888742222222334444444433211 12233445799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEE-EecChhHHh
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVV-EQGTQSSLL 1202 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Iv-e~Gt~~eLl 1202 (1224)
+|++|||||||++||+.+...+.+.|+++ +.|||+|||+++.+.. ||+|++|++|+++ ..|++++..
T Consensus 448 ~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~gtvi~vSHd~~~~~~~~d~i~~l~~G~i~~~~g~~~~~~ 516 (638)
T PRK10636 448 RPNLLLLDEPTNHLDLDMRQALTEALIDF--EGALVVVSHDRHLLRSTTDDLYLVHDGKVEPFDGDLEDYQ 516 (638)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCeEEEEeCCHHHHHHhCCEEEEEECCEEEEcCCCHHHHH
Confidence 99999999999999999999999999887 4599999999999976 9999999999997 689998874
No 96
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=4.4e-61 Score=634.69 Aligned_cols=213 Identities=23% Similarity=0.371 Sum_probs=176.4
Q ss_pred cEEEEEEEEECCCC----------CCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC--CCceEEECCccC
Q 047171 977 FIELKNVFFSYPSR----------PDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP--QSGSVMVDERNI 1044 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~----------~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p--~~G~I~idG~di 1044 (1224)
.+.|+||++..+.. ....+|+|+|++++|||.+||+||||||||||+++|.|..++ .+|+|.+||.+.
T Consensus 867 ~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~ 946 (1470)
T PLN03140 867 AMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPK 946 (1470)
T ss_pred eEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEECCCCCCHHHHHHHHcCCCCCCcccceEEECCccC
Confidence 68999999997532 123699999999999999999999999999999999999763 689999999876
Q ss_pred CCCCHHHHhcceEEEecCCCCCc-ccHHHHHccCC----C-CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCC
Q 047171 1045 KSYNLRKLRSCIALVSQEPTLFA-GTIRQNIVYGK----E-VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERG 1114 (1224)
Q Consensus 1045 ~~~~~~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~----~-~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G 1114 (1224)
+ ...+|+.+|||+|++.++. .|++|||.++. + ..++++ +.+.++..++.+ -.|+.+|..+
T Consensus 947 ~---~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~~~v~~vl~~lgL~~-------~~~~~vg~~~ 1016 (1470)
T PLN03140 947 K---QETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKMMFVDEVMELVELDN-------LKDAIVGLPG 1016 (1470)
T ss_pred C---hHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHCCChh-------HhCCccCCCC
Confidence 4 3457788999999987775 69999998742 1 223332 344555544433 3477787554
Q ss_pred -CCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchh-h-hhcCEEEEEeC-
Q 047171 1115 -VQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLST-I-QKADNIVVIKN- 1189 (1224)
Q Consensus 1115 -~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t-i-~~aD~I~vl~~- 1189 (1224)
..||||||||++|||||+.+|+||+||||||+||+.+...+.+.|+++. +|+|+|+++|+++. + ..||++++|++
T Consensus 1017 ~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tVI~t~Hq~~~~i~~~~D~vllL~~g 1096 (1470)
T PLN03140 1017 VTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRG 1096 (1470)
T ss_pred CCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCCCHHHHHhCCEEEEEcCC
Confidence 6899999999999999999999999999999999999999999999875 57999999999984 4 56999999996
Q ss_pred CEEEEecChh
Q 047171 1190 GKVVEQGTQS 1199 (1224)
Q Consensus 1190 G~Ive~Gt~~ 1199 (1224)
|+++..|+..
T Consensus 1097 G~~v~~G~~~ 1106 (1470)
T PLN03140 1097 GQVIYSGPLG 1106 (1470)
T ss_pred CEEEEECCcc
Confidence 8999999863
No 97
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=1.1e-60 Score=596.34 Aligned_cols=201 Identities=25% Similarity=0.372 Sum_probs=163.0
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++ .++|+|+||+|++|+++||+||||||||||+++|+|+++|++|+|.+ |.++ +|
T Consensus 319 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~p~~G~i~~-~~~~----------~i 384 (635)
T PRK11147 319 VFEMENVNYQIDG---KQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQADSGRIHC-GTKL----------EV 384 (635)
T ss_pred eEEEeeeEEEECC---eEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEE-CCCc----------EE
Confidence 5999999999963 45999999999999999999999999999999999999999999999 5432 59
Q ss_pred EEEecCC-CCCc-ccHHHHHccCCCCC--C--HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1057 ALVSQEP-TLFA-GTIRQNIVYGKEVA--T--EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1057 ~~V~Qdp-~LF~-gTIreNl~~~~~~~--~--deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
+|++|++ .++. .|+.||+.++.+.. + +.++.+.++..++. ++..+ .....||||||||++||||
T Consensus 385 ~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~------~~~~~----~~~~~LSgGekqRl~la~a 454 (635)
T PRK11147 385 AYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFH------PKRAM----TPVKALSGGERNRLLLARL 454 (635)
T ss_pred EEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCC------HHHHh----ChhhhCCHHHHHHHHHHHH
Confidence 9999986 3554 59999998753221 1 22222222222210 11123 3445799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe-CCEEEE-ecChhHHhh
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIK-NGKVVE-QGTQSSLLS 1203 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~-~G~Ive-~Gt~~eLl~ 1203 (1224)
++.+|++|||||||++||+.+...+.+.|++. ++|+|+|||+++.+.. ||+|++|+ +|++.+ .|+|++-+.
T Consensus 455 l~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~--~~tvi~vSHd~~~~~~~~d~i~~l~~~g~i~~~~g~y~~y~~ 528 (635)
T PRK11147 455 FLKPSNLLILDEPTNDLDVETLELLEELLDSY--QGTVLLVSHDRQFVDNTVTECWIFEGNGKIGRYVGGYHDARQ 528 (635)
T ss_pred HhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC--CCeEEEEECCHHHHHHhcCEEEEEeCCCeEEEccCCHHHHHH
Confidence 99999999999999999999999999999876 5699999999999876 99999998 899987 577777643
No 98
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=4.5e-61 Score=597.49 Aligned_cols=200 Identities=30% Similarity=0.406 Sum_probs=164.0
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
..|+++||+++|++ ..++|+|+||+|++||++||+||||||||||+++|+|+.+|++|+|.+++ +.+
T Consensus 507 ~~L~~~~ls~~y~~--~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~p~~G~I~~~~-----------~~~ 573 (718)
T PLN03073 507 PIISFSDASFGYPG--GPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQPSSGTVFRSA-----------KVR 573 (718)
T ss_pred ceEEEEeeEEEeCC--CCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCceEEECC-----------cee
Confidence 36999999999963 23589999999999999999999999999999999999999999999976 246
Q ss_pred eEEEecCCCCCcccHHHHHcc--C--CCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHH
Q 047171 1056 IALVSQEPTLFAGTIRQNIVY--G--KEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAV 1131 (1224)
Q Consensus 1056 i~~V~Qdp~LF~gTIreNl~~--~--~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAl 1131 (1224)
|+|+||++. ...++.+|... . .+..+++++.++++..++.+. ........||||||||++||||+
T Consensus 574 igyv~Q~~~-~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~----------~~~~~~~~LSgGqkqRvaLAraL 642 (718)
T PLN03073 574 MAVFSQHHV-DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGN----------LALQPMYTLSGGQKSRVAFAKIT 642 (718)
T ss_pred EEEEecccc-ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChH----------HhcCCccccCHHHHHHHHHHHHH
Confidence 999999973 23345555321 1 123456666666666555321 12234568999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEE-EecChhHH
Q 047171 1132 LKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVV-EQGTQSSL 1201 (1224)
Q Consensus 1132 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Iv-e~Gt~~eL 1201 (1224)
+.+|++|||||||++||+.+...+.+.|.+. +.|+|+|||+++.+.. ||+|++|++|+++ ..|++++.
T Consensus 643 ~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~gtvIivSHd~~~i~~~~drv~~l~~G~i~~~~g~~~~~ 712 (718)
T PLN03073 643 FKKPHILLLDEPSNHLDLDAVEALIQGLVLF--QGGVLMVSHDEHLISGSVDELWVVSEGKVTPFHGTFHDY 712 (718)
T ss_pred hcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--CCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCCHHHH
Confidence 9999999999999999999999999999775 3599999999999976 9999999999998 67887765
No 99
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=3.7e-61 Score=588.90 Aligned_cols=192 Identities=22% Similarity=0.311 Sum_probs=161.0
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.++++|++++|++ ..|+++||+|++||++||+||||||||||+++|.|+.+|++|+|.++ + ++
T Consensus 340 ~l~~~~ls~~~~~----~~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~p~~G~I~~~---~----------~i 402 (590)
T PRK13409 340 LVEYPDLTKKLGD----FSLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLKPDEGEVDPE---L----------KI 402 (590)
T ss_pred EEEEcceEEEECC----EEEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEEe---e----------eE
Confidence 5899999999953 25999999999999999999999999999999999999999999986 1 59
Q ss_pred EEEecCCCC-CcccHHHHHccCCCCCC-HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1057 ALVSQEPTL-FAGTIRQNIVYGKEVAT-EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1057 ~~V~Qdp~L-F~gTIreNl~~~~~~~~-deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
+|+||++.+ ++.|++||+.++..... +..+.++++..++.+ .......+||||||||++|||||+++
T Consensus 403 ~y~~Q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~L~~l~l~~-----------~~~~~~~~LSGGe~QRvaiAraL~~~ 471 (590)
T PRK13409 403 SYKPQYIKPDYDGTVEDLLRSITDDLGSSYYKSEIIKPLQLER-----------LLDKNVKDLSGGELQRVAIAACLSRD 471 (590)
T ss_pred EEecccccCCCCCcHHHHHHHHhhhcChHHHHHHHHHHCCCHH-----------HHhCCcccCCHHHHHHHHHHHHHhcC
Confidence 999999875 46799999987532222 223344444444432 23344567999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt 1197 (1224)
|+||||||||++||+++...+.+.|+++.+ ++|+|+|||+++.+.. ||||++|+ |++...|+
T Consensus 472 p~llLLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tviivsHD~~~~~~~aDrvivl~-~~~~~~g~ 536 (590)
T PRK13409 472 ADLYLLDEPSAHLDVEQRLAVAKAIRRIAEEREATALVVDHDIYMIDYISDRLMVFE-GEPGKHGH 536 (590)
T ss_pred CCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEc-Ccceeeee
Confidence 999999999999999999999999998753 7899999999999876 99999996 48877776
No 100
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.6e-60 Score=547.08 Aligned_cols=446 Identities=24% Similarity=0.406 Sum_probs=341.1
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCH-HHHhcccEEe
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQL-KWLRSQMGLV 396 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~v 396 (1224)
++++|++++|++. .++++.||+|+||||||||+|.|+|.|+|++|+|.+||++..-.++ +.....|+.|
T Consensus 9 l~~~~i~K~FggV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~~G~I~~~G~~~~~~sp~~A~~~GI~~V 88 (500)
T COG1129 9 LELRGISKSFGGVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPDSGEILIDGKPVAFSSPRDALAAGIATV 88 (500)
T ss_pred eeeecceEEcCCceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCCCceEEECCEEccCCCHHHHHhCCcEEE
Confidence 7788888888753 2577999999999999999999999999999999999999986665 5567789999
Q ss_pred cCCCCCCcc-cHHHHHhcCCCCCC-HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 397 NQEPILFST-SIKENILIGKPGAS-METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~~~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
+||..|++. ||.|||.+|+.... .--+.+..-...+.+.+.++ |.+........+||+||||.|+||||+..+++|
T Consensus 89 ~QEl~L~p~LsVaeNifLgre~~~~~g~id~~~m~~~A~~~l~~l--g~~~~~~~~v~~LsiaqrQ~VeIArAl~~~arl 166 (500)
T COG1129 89 HQELSLVPNLSVAENIFLGREPTRRFGLIDRKAMRRRARELLARL--GLDIDPDTLVGDLSIAQRQMVEIARALSFDARV 166 (500)
T ss_pred eechhccCCccHHHHhhcccccccCCCccCHHHHHHHHHHHHHHc--CCCCChhhhhhhCCHHHHHHHHHHHHHhcCCCE
Confidence 999999976 99999999975322 11111222222233456655 332225666678999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecCh-HHHHhhccCCCchHHH
Q 047171 475 LLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSH-DVLMQMNNGEGGAYSK 551 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~-~~l~~~~~~~~~~y~~ 551 (1224)
+|||||||+|+....+.+.+.+++++ +|.++|+||||++++.. ||||.||+||+.+..++. .++-.
T Consensus 167 lIlDEPTaaLt~~E~~~Lf~~ir~Lk~~Gv~ii~ISHrl~Ei~~i~DritVlRDG~~v~~~~~~~~~~~----------- 235 (500)
T COG1129 167 LILDEPTAALTVKETERLFDLIRRLKAQGVAIIYISHRLDEVFEIADRITVLRDGRVVGTRPTAAETSE----------- 235 (500)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHhcCEEEEEeCCEEeeecccccCCCH-----------
Confidence 99999999999988778888888765 79999999999999977 999999999999874321 00000
Q ss_pred HHHHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccCCC
Q 047171 552 MVQLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNFHD 631 (1224)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 631 (1224)
+ +
T Consensus 236 ----------------------------------------------------------------------~----~---- 237 (500)
T COG1129 236 ----------------------------------------------------------------------D----E---- 237 (500)
T ss_pred ----------------------------------------------------------------------H----H----
Confidence 0 0
Q ss_pred CCCCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHH
Q 047171 632 NSHSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIAN 711 (1224)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 711 (1224)
++...
T Consensus 238 ---------------------------------------------lv~~M------------------------------ 242 (500)
T COG1129 238 ---------------------------------------------LVRLM------------------------------ 242 (500)
T ss_pred ---------------------------------------------HHHHh------------------------------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 712 LIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLS 791 (1224)
Q Consensus 712 ~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 791 (1224)
+|+
T Consensus 243 ----------------------------------------vGr------------------------------------- 245 (500)
T COG1129 243 ----------------------------------------VGR------------------------------------- 245 (500)
T ss_pred ----------------------------------------hCc-------------------------------------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHH
Q 047171 792 LLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKE 871 (1224)
Q Consensus 792 ~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~ 871 (1224)
T Consensus 246 -------------------------------------------------------------------------------- 245 (500)
T COG1129 246 -------------------------------------------------------------------------------- 245 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 872 SIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFT 951 (1224)
Q Consensus 872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~ 951 (1224)
+
T Consensus 246 -------------------------------------------------------------------------------~ 246 (500)
T COG1129 246 -------------------------------------------------------------------------------E 246 (500)
T ss_pred -------------------------------------------------------------------------------c
Confidence 0
Q ss_pred HHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC
Q 047171 952 ILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD 1031 (1224)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~ 1031 (1224)
+-+..+. .. .. .+....++++|++.. ..++|+||++++||.+||.|--|||+|-++++|+|..+
T Consensus 247 ~~~~~~~-~~--~~------~~~~~~l~v~~l~~~-------~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~ 310 (500)
T COG1129 247 LEDLFPE-PP--EE------GIGEPVLEVRNLSGG-------GKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP 310 (500)
T ss_pred hhhhccc-cc--cc------CCCCcEEEEecCCCC-------CceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc
Confidence 0000000 00 00 001124778887642 15799999999999999999999999999999999988
Q ss_pred CCCceEEECCccCCCCCHH-HHhcceEEEecCCC----CCcccHHHHHccCC-CCCCHH-HHHHHHHHHhHHHHHHhccc
Q 047171 1032 PQSGSVMVDERNIKSYNLR-KLRSCIALVSQEPT----LFAGTIRQNIVYGK-EVATEA-EIRKAAVLANAHEFISSTED 1104 (1224)
Q Consensus 1032 p~~G~I~idG~di~~~~~~-~lR~~i~~V~Qdp~----LF~gTIreNl~~~~-~~~~de-ei~~al~~a~l~~~I~~lp~ 1104 (1224)
+.+|+|.+||.++.--++. ..+..|+|||-|-. +...+|++|+.+.. ...... -+....+.....+++.+|.-
T Consensus 311 ~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~I 390 (500)
T COG1129 311 ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSEGLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRI 390 (500)
T ss_pred CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccCcCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCc
Confidence 9999999999988777755 58899999999874 44679999998762 111100 23444455556677776532
Q ss_pred ---ccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-
Q 047171 1105 ---GYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQ- 1179 (1224)
Q Consensus 1105 ---gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~- 1179 (1224)
+.+.+ ..+||||++|+++|||+|..+|+||||||||.++|..+.+.|.+.|+++. +|+++|+||..+.++.
T Consensus 391 k~~s~~~~----v~~LSGGNQQKVvlarwL~~~p~vLilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElpEll~ 466 (500)
T COG1129 391 KTPSPEQP----IGTLSGGNQQKVVLARWLATDPKVLILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELPELLG 466 (500)
T ss_pred ccCCccch----hhcCCchhhhhHHHHHHHhcCCCEEEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChHHHHh
Confidence 23333 35799999999999999999999999999999999999999999999876 6899999999999986
Q ss_pred hcCEEEEEeCCEEEEe
Q 047171 1180 KADNIVVIKNGKVVEQ 1195 (1224)
Q Consensus 1180 ~aD~I~vl~~G~Ive~ 1195 (1224)
.||||+||.+|+|+..
T Consensus 467 ~~DRIlVm~~Gri~~e 482 (500)
T COG1129 467 LSDRILVMREGRIVGE 482 (500)
T ss_pred hCCEEEEEECCEEEEE
Confidence 5999999999999864
No 101
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=2.6e-59 Score=555.63 Aligned_cols=204 Identities=31% Similarity=0.428 Sum_probs=172.8
Q ss_pred cccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhc
Q 047171 975 KGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRS 1054 (1224)
Q Consensus 975 ~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~ 1054 (1224)
+..++++|+++.|++. +++++++||.|++|++||||||||+|||||+++|.|...|.+|+|.+.-. +
T Consensus 319 ~~vl~~~~~~~~y~~~--~~l~~~~s~~i~~g~riaiiG~NG~GKSTLlk~l~g~~~~~~G~v~~g~~-v---------- 385 (530)
T COG0488 319 KLVLEFENVSKGYDGG--RLLLKDLSFRIDRGDRIAIVGPNGAGKSTLLKLLAGELGPLSGTVKVGET-V---------- 385 (530)
T ss_pred CeeEEEeccccccCCC--ceeecCceEEecCCCEEEEECCCCCCHHHHHHHHhhhcccCCceEEeCCc-e----------
Confidence 3469999999999643 57999999999999999999999999999999999999999999998543 3
Q ss_pred ceEEEecCC-CCC-cccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1055 CIALVSQEP-TLF-AGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1055 ~i~~V~Qdp-~LF-~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
++||.+|+. .++ +.|+-|++.-..+...+.+++..|...++..- -..++| ..||||||-|+.||+.++
T Consensus 386 ~igyf~Q~~~~l~~~~t~~d~l~~~~~~~~e~~~r~~L~~f~F~~~------~~~~~v----~~LSGGEk~Rl~La~ll~ 455 (530)
T COG0488 386 KIGYFDQHRDELDPDKTVLEELSEGFPDGDEQEVRAYLGRFGFTGE------DQEKPV----GVLSGGEKARLLLAKLLL 455 (530)
T ss_pred EEEEEEehhhhcCccCcHHHHHHhhCccccHHHHHHHHHHcCCChH------HHhCch----hhcCHhHHHHHHHHHHhc
Confidence 499999998 444 35899999876655556777777665544221 123344 469999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe-cChhHHhhc
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQ-GTQSSLLSM 1204 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~-Gt~~eLl~~ 1204 (1224)
.+|.+|||||||.+||.+|...+.++|.+. ..|||+|||+.+.+.. |++|+++++ ++.++ |+|++-++.
T Consensus 456 ~~pNvLiLDEPTNhLDi~s~~aLe~aL~~f--~Gtvl~VSHDr~Fl~~va~~i~~~~~-~~~~~~g~y~~y~~~ 526 (530)
T COG0488 456 QPPNLLLLDEPTNHLDIESLEALEEALLDF--EGTVLLVSHDRYFLDRVATRIWLVED-KVEEFEGGYEDYLEQ 526 (530)
T ss_pred cCCCEEEEcCCCccCCHHHHHHHHHHHHhC--CCeEEEEeCCHHHHHhhcceEEEEcC-ceeEcCCCHHHHHHh
Confidence 999999999999999999999999999876 5699999999999988 999999998 88777 888887654
No 102
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=5e-58 Score=514.71 Aligned_cols=451 Identities=25% Similarity=0.452 Sum_probs=345.6
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC-CHHHHhcccEEe
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL-QLKWLRSQMGLV 396 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-~~~~~r~~i~~v 396 (1224)
++++++++.||+. .++++-||.|+||+|||||++.|.|+|+|++|+|++||++++-- +.+.+|..||+|
T Consensus 5 l~~~~itK~f~~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~~GeI~v~G~~v~~~sP~dA~~~GIGMV 84 (501)
T COG3845 5 LEMRGITKRFPGVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPDSGEIRVDGKEVRIKSPRDAIRLGIGMV 84 (501)
T ss_pred EEEeccEEEcCCEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCCcceEEECCEEeccCCHHHHHHcCCcEE
Confidence 5666666666531 35779999999999999999999999999999999999999855 457788999999
Q ss_pred cCCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 047171 397 NQEPILFST-SIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKIL 475 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~il 475 (1224)
.|++.|++. ||.|||.+|.+......+........+.+..+++ |++-...++...||-||||||.|-+|||++|++|
T Consensus 85 hQHF~Lv~~lTV~ENiiLg~e~~~~~~~~~~~~~~~i~~l~~~y--Gl~vdp~~~V~dLsVG~qQRVEIlKaLyr~a~iL 162 (501)
T COG3845 85 HQHFMLVPTLTVAENIILGLEPSKGGLIDRRQARARIKELSERY--GLPVDPDAKVADLSVGEQQRVEILKALYRGARLL 162 (501)
T ss_pred eeccccccccchhhhhhhcCccccccccCHHHHHHHHHHHHHHh--CCCCCccceeecCCcchhHHHHHHHHHhcCCCEE
Confidence 999999977 9999999998642111111222223344555555 6666777888899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhccCCCchHHHHH
Q 047171 476 LLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMV 553 (1224)
Q Consensus 476 ilDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~ 553 (1224)
|||||||-|-|...+.+.+.++.+. .|+|+|+|||++.++.. |||+-||++|+++..-++ .
T Consensus 163 ILDEPTaVLTP~E~~~lf~~l~~l~~~G~tIi~ITHKL~Ev~~iaDrvTVLR~Gkvvgt~~~--~--------------- 225 (501)
T COG3845 163 ILDEPTAVLTPQEADELFEILRRLAAEGKTIIFITHKLKEVMAIADRVTVLRRGKVVGTVDP--V--------------- 225 (501)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhhCeeEEEeCCeEEeeecC--C---------------
Confidence 9999999999988888888888764 69999999999999987 999999999998652110 0
Q ss_pred HHHHHhhhhhcccCCCCCCCCcccccccCCCCCCCCCCCCCCCCCCCCCCCCCCccccccCcccccccccccCccCCCCC
Q 047171 554 QLQQSAMRNEVASGSYNPTKSKSHHSLMSAQTPHTPINEGSSYQNSPIYPLSPTFSISMTGSFQMHSVENQNDKNFHDNS 633 (1224)
Q Consensus 554 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 633 (1224)
. + .+ .+
T Consensus 226 ----------------~-------------~---------~t------------------------------~~------ 231 (501)
T COG3845 226 ----------------A-------------E---------TT------------------------------EE------ 231 (501)
T ss_pred ----------------C-------------C---------CC------------------------------HH------
Confidence 0 0 00 00
Q ss_pred CCchHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccCchhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 047171 634 HSPSSLLRLLRMSAIEWKRTLLGCLGSAGSGAIYPSYAYCLGSVVSAYFIKDDSKLKSETRLYCLIFLGLAFLTLIANLI 713 (1224)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 713 (1224)
. ++.++
T Consensus 232 -------e--------------------------------la~lM----------------------------------- 237 (501)
T COG3845 232 -------E--------------------------------LAELM----------------------------------- 237 (501)
T ss_pred -------H--------------------------------HHHHh-----------------------------------
Confidence 0 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 714 QHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMSLLIQVFFSASLAYTLSLL 793 (1224)
Q Consensus 714 ~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 793 (1224)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHH
Q 047171 794 VTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSSQDRILDLFRETMKGPKKESI 873 (1224)
Q Consensus 794 ~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~ 873 (1224)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T COG3845 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 874 KQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTIL 953 (1224)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~ 953 (1224)
....+.
T Consensus 238 --------------------------------vG~~v~------------------------------------------ 243 (501)
T COG3845 238 --------------------------------VGREVV------------------------------------------ 243 (501)
T ss_pred --------------------------------cCCccc------------------------------------------
Confidence 000000
Q ss_pred ccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC
Q 047171 954 DRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ 1033 (1224)
Q Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~ 1033 (1224)
.+. + .. +..|....++++|++..=+ + +.+.+++|||+|++||.+||.|-.|-|-+.|+.+|.|+.+|.
T Consensus 244 -~~~---~-~~-----~~~pg~~vL~V~~L~v~~~-~-~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~~ 311 (501)
T COG3845 244 -LRV---V-KP-----PSTPGEVVLEVEDLSVKDR-R-GVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKPA 311 (501)
T ss_pred -ccc---c-cC-----CCCCCCeEEEEeeeEeecC-C-CCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCccC
Confidence 000 0 00 1112233689999998532 2 345799999999999999999999999999999999999999
Q ss_pred CceEEECCccC-CCCCHHHHh-cceEEEecCCC----CCcccHHHHHccCCCC---------CCHHHHHHHHHHHhHHHH
Q 047171 1034 SGSVMVDERNI-KSYNLRKLR-SCIALVSQEPT----LFAGTIRQNIVYGKEV---------ATEAEIRKAAVLANAHEF 1098 (1224)
Q Consensus 1034 ~G~I~idG~di-~~~~~~~lR-~~i~~V~Qdp~----LF~gTIreNl~~~~~~---------~~deei~~al~~a~l~~~ 1098 (1224)
+|+|.++|.|+ ...++..+| ..++|||.|.+ ..+.|+.||+.++... .+..++.+.+ .+.
T Consensus 312 ~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a-----~~l 386 (501)
T COG3845 312 SGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGHGLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFA-----REL 386 (501)
T ss_pred CceEEECCEeccccCCHHHHHhcCCccCChhhccCccccCccHHHHhhhhhccccccccccccCHHHHHHHH-----HHH
Confidence 99999999997 666777764 56999999985 6678999999876422 1223343322 233
Q ss_pred HHhc---ccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccC
Q 047171 1099 ISST---EDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHR 1174 (1224)
Q Consensus 1099 I~~l---p~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHr 1174 (1224)
++.+ +.+.+++ ..+||||+.||+-+||-|.++|++||..+||-+||..+.+.|.+.|.+.. +|+.|++|+-+
T Consensus 387 i~~fdVr~~~~~~~----a~~LSGGNqQK~IlaREl~~~p~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~d 462 (501)
T COG3845 387 IEEFDVRAPSPDAP----ARSLSGGNQQKLILARELARRPDLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISED 462 (501)
T ss_pred HHHcCccCCCCCcc----hhhcCCcceehhhhhhhhccCCCEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehh
Confidence 3322 2233333 35799999999999999999999999999999999999999999998776 68999999999
Q ss_pred chhhhh-cCEEEEEeCCEEEEecChhH
Q 047171 1175 LSTIQK-ADNIVVIKNGKVVEQGTQSS 1200 (1224)
Q Consensus 1175 l~ti~~-aD~I~vl~~G~Ive~Gt~~e 1200 (1224)
|+.+.. ||||.||.+|+|+....+++
T Consensus 463 LDEil~lsDrIaVi~~Gri~~~~~~~~ 489 (501)
T COG3845 463 LDEILELSDRIAVIYEGRIVGIVPPEE 489 (501)
T ss_pred HHHHHHhhheeeeeeCCceeccccccc
Confidence 999866 99999999999998776665
No 103
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7e-53 Score=469.42 Aligned_cols=237 Identities=27% Similarity=0.428 Sum_probs=223.5
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
|.|+|+|++++|+.. +.++|+|+||+|++||++||+||||||||||+++|+|+++ ++|+|++||.++..++...+|++
T Consensus 1 g~i~~~nls~~~~~~-~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~ 78 (275)
T cd03289 1 GQMTVKDLTAKYTEG-GNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKA 78 (275)
T ss_pred CeEEEEEEEEEeCCC-CCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhh
Confidence 469999999999742 3469999999999999999999999999999999999998 78999999999999999999999
Q ss_pred eEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 047171 1056 IALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNP 1135 (1224)
Q Consensus 1056 i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p 1135 (1224)
++||||+|.+|++|+++|+++.. ..++++++++++.+++.+++..+|++|++.++++|.+||||||||+|||||++++|
T Consensus 79 i~~v~q~~~lf~~tv~~nl~~~~-~~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p 157 (275)
T cd03289 79 FGVIPQKVFIFSGTFRKNLDPYG-KWSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKA 157 (275)
T ss_pred EEEECCCcccchhhHHHHhhhcc-CCCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998653 35788999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHH
Q 047171 1136 MILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIK 1215 (1224)
Q Consensus 1136 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~ 1215 (1224)
+||||||||++||+.+++.+++.|++...++|+|+||||++++..||||++|++|++++.|+|++|++. ++.|++++.
T Consensus 158 ~illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~--~~~~~~~~~ 235 (275)
T cd03289 158 KILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE--KSHFKQAIS 235 (275)
T ss_pred CEEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC--cHHHHHHHh
Confidence 999999999999999999999999988889999999999999999999999999999999999999986 688999986
Q ss_pred Hh
Q 047171 1216 MQ 1217 (1224)
Q Consensus 1216 ~q 1217 (1224)
..
T Consensus 236 ~~ 237 (275)
T cd03289 236 PS 237 (275)
T ss_pred hc
Confidence 54
No 104
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.5e-50 Score=405.86 Aligned_cols=223 Identities=31% Similarity=0.519 Sum_probs=190.5
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccC-CCCCHHHHhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNI-KSYNLRKLRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di-~~~~~~~lR~~ 1055 (1224)
-|+++||+.+|. +..||+|||++|++||.++|+||||||||||+++|.++.+|++|+|.+||.++ ...+...+|++
T Consensus 2 mi~i~~l~K~fg---~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~ 78 (240)
T COG1126 2 MIEIKNLSKSFG---DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRK 78 (240)
T ss_pred eEEEEeeeEEeC---CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHh
Confidence 489999999996 44699999999999999999999999999999999999999999999999766 33378899999
Q ss_pred eEEEecCCCCCc-ccHHHHHccCC---CCCCHHHH----HHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGK---EVATEAEI----RKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~---~~~~deei----~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
+|+|+|...||. .|+.||+.++- ...+.+|- .+.++++++.|-... .+.+||||||||+||
T Consensus 79 vGmVFQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~-----------yP~qLSGGQqQRVAI 147 (240)
T COG1126 79 VGMVFQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADA-----------YPAQLSGGQQQRVAI 147 (240)
T ss_pred cCeecccccccccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhh-----------CccccCcHHHHHHHH
Confidence 999999999996 79999999862 12233322 334455555554444 446799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMG 1205 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~ 1205 (1224)
||||.-+|+++|+|||||||||+.-..+.+.++++. .|.|.|+|||.+...++ ||||+.||+|+|+|+|+|+++..++
T Consensus 148 ARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~p 227 (240)
T COG1126 148 ARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDNP 227 (240)
T ss_pred HHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcCC
Confidence 999999999999999999999999999999999887 57899999999999988 9999999999999999999999874
Q ss_pred CCchhHHH
Q 047171 1206 NGGAYYSL 1213 (1224)
Q Consensus 1206 ~~g~y~~l 1213 (1224)
.+..-+++
T Consensus 228 ~~~R~~~F 235 (240)
T COG1126 228 KSERTRQF 235 (240)
T ss_pred CCHHHHHH
Confidence 33333333
No 105
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-49 Score=450.83 Aligned_cols=225 Identities=29% Similarity=0.448 Sum_probs=199.5
Q ss_pred CCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCC-
Q 047171 972 EPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIK- 1045 (1224)
Q Consensus 972 ~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~- 1045 (1224)
|+..+.|+|+|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||+++.
T Consensus 75 ~~~~~~i~~~nls~~y~~~-~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~ 153 (329)
T PRK14257 75 FNHANVFEIRNFNFWYMNR-TKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRS 153 (329)
T ss_pred CCcCceEEEEeeEEEecCC-CceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccc
Confidence 5566789999999999642 3569999999999999999999999999999999999997 57999999999997
Q ss_pred -CCCHHHHhcceEEEecCCCCCcccHHHHHccCCC--CCCHHHHHH-----HHHHHhHHHHHHhcccccccccCCCCCCC
Q 047171 1046 -SYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VATEAEIRK-----AAVLANAHEFISSTEDGYDTYCGERGVQL 1117 (1224)
Q Consensus 1046 -~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~~deei~~-----al~~a~l~~~I~~lp~gldt~vge~G~~L 1117 (1224)
..++..+|++++||||+|++|++|++|||+++.. ..++++.++ +++.++ ++.++++.++++|.+|
T Consensus 154 ~~~~~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~L 226 (329)
T PRK14257 154 KKISSLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNAL 226 (329)
T ss_pred cccchHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccC
Confidence 4566789999999999999999999999997632 234454433 334433 3456678899999999
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1118 SGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1118 SGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
|||||||+|||||++++|+|||||||||+||+++.+.+++.|+++.+++|+|+|||+++++.. ||||+||++|+|+|.|
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g 306 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAG 306 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeC
Confidence 999999999999999999999999999999999999999999999889999999999999988 9999999999999999
Q ss_pred ChhHHhhc
Q 047171 1197 TQSSLLSM 1204 (1224)
Q Consensus 1197 t~~eLl~~ 1204 (1224)
+++++...
T Consensus 307 ~~~~l~~~ 314 (329)
T PRK14257 307 ETKTIFIH 314 (329)
T ss_pred CHHHHhcC
Confidence 99999876
No 106
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-49 Score=420.20 Aligned_cols=228 Identities=35% Similarity=0.534 Sum_probs=193.5
Q ss_pred EEEEEEEEECCCC--CCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC---HHHH
Q 047171 978 IELKNVFFSYPSR--PDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN---LRKL 1052 (1224)
Q Consensus 978 I~~~~vsf~Y~~~--~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~---~~~l 1052 (1224)
|+++||++.|+.. +...+|+||||+|++||..||+|+||||||||++++.++-+|++|+|.+||.|+..++ +..+
T Consensus 2 I~l~~vsK~~~~~~~~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~ 81 (339)
T COG1135 2 IELENVSKTFGQTGTGTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQL 81 (339)
T ss_pred eEEEeeeeeeccCCCCceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHH
Confidence 7999999999852 1246899999999999999999999999999999999999999999999998887776 5557
Q ss_pred hcceEEEecCCCCCc-ccHHHHHccCCC--CCCHHHHH----HHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1053 RSCIALVSQEPTLFA-GTIRQNIVYGKE--VATEAEIR----KAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1053 R~~i~~V~Qdp~LF~-gTIreNl~~~~~--~~~deei~----~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
|++||+|+|++.|++ .|+.+|+.|... ..+.+++. +.++.+++ ...-+..+.+||||||||+
T Consensus 82 R~~IGMIFQhFnLLssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL-----------~dk~~~yP~qLSGGQKQRV 150 (339)
T COG1135 82 RQKIGMIFQHFNLLSSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGL-----------SDKADRYPAQLSGGQKQRV 150 (339)
T ss_pred HhhccEEeccccccccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCC-----------hhhhccCchhcCcchhhHH
Confidence 899999999999997 899999998743 23444443 33444444 3344455678999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
+|||||..+|+|||.|||||||||+|.+.|.+.|++.- -|-|+++|||.++.+++ |||+.||++|+|+|+|+-.++.
T Consensus 151 aIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF 230 (339)
T COG1135 151 AIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVF 230 (339)
T ss_pred HHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhh
Confidence 99999999999999999999999999999999998754 37899999999999988 9999999999999999999999
Q ss_pred hcCCCchhHHHHHH
Q 047171 1203 SMGNGGAYYSLIKM 1216 (1224)
Q Consensus 1203 ~~~~~g~y~~l~~~ 1216 (1224)
.+++...=.+++..
T Consensus 231 ~~Pk~~~t~~fi~~ 244 (339)
T COG1135 231 ANPKHAITQEFIGE 244 (339)
T ss_pred cCcchHHHHHHHHh
Confidence 87434444455443
No 107
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-48 Score=390.86 Aligned_cols=218 Identities=30% Similarity=0.480 Sum_probs=199.2
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCC-----ceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQS-----GSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~-----G~I~idG~di~~--~~~ 1049 (1224)
.++++|+++.|. +..+|+|||++|++++.+|++|||||||||++++|.|+.+... |+|.+||.||.+ ++.
T Consensus 7 ~~~~~~l~~yYg---~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~ 83 (253)
T COG1117 7 AIEVRDLNLYYG---DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDV 83 (253)
T ss_pred eeEecceeEEEC---chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCH
Confidence 589999999996 4569999999999999999999999999999999999999875 999999999966 579
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC------CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE------VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~------~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
-.+|+++|+|+|.|.-|..||.||+.||-. ..-||-++++++.|.+||-+.. .+.+.+..|||||+|
T Consensus 84 ~~lRr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQ 156 (253)
T COG1117 84 VELRRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQ 156 (253)
T ss_pred HHHHHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHH
Confidence 999999999999999999999999999832 1124568899999999998753 344678889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
||||||||.-+|+|||||||||||||.+...|.+.|.++.++-|+|+|||.+.-..+ +|+...+..|+++|.|..+++.
T Consensus 157 RLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF 236 (253)
T COG1117 157 RLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIF 236 (253)
T ss_pred HHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhh
Confidence 999999999999999999999999999999999999999988999999999998765 9999999999999999999998
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
.+
T Consensus 237 ~~ 238 (253)
T COG1117 237 TN 238 (253)
T ss_pred cC
Confidence 76
No 108
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.1e-48 Score=389.16 Aligned_cols=207 Identities=35% Similarity=0.554 Sum_probs=181.2
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecC-CCCHHHHhcccEEe
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIK-KLQLKWLRSQMGLV 396 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~r~~i~~v 396 (1224)
|+++||+++|++. .++++++|+||||||||||+++|.|+-+|++|+|.+||.++. ..+...+|+++|+|
T Consensus 3 i~i~~l~K~fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~~G~I~i~g~~~~~~~~~~~~R~~vGmV 82 (240)
T COG1126 3 IEIKNLSKSFGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPDSGSITVDGEDVGDKKDILKLRRKVGMV 82 (240)
T ss_pred EEEEeeeEEeCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCCCceEEECCEeccchhhHHHHHHhcCee
Confidence 7888999998743 357799999999999999999999999999999999998874 33788899999999
Q ss_pred cCCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 047171 397 NQEPILFST-SIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDP 472 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~ 472 (1224)
+|+..||+. |+.||+.++.- ..+.++..+. +.+.++++ |+.......+.+|||||||||||||||..+|
T Consensus 83 FQ~fnLFPHlTvleNv~lap~~v~~~~k~eA~~~-----A~~lL~~V--GL~~ka~~yP~qLSGGQqQRVAIARALaM~P 155 (240)
T COG1126 83 FQQFNLFPHLTVLENVTLAPVKVKKLSKAEAREK-----ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARALAMDP 155 (240)
T ss_pred cccccccccchHHHHHHhhhHHHcCCCHHHHHHH-----HHHHHHHc--CchhhhhhCccccCcHHHHHHHHHHHHcCCC
Confidence 999999976 99999998742 2233333222 23566666 7777788899999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHH-cCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 473 KILLLDEATSALDAESERIVQEALDQA-SQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 473 ~ililDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+++++|||||||||+....+.+.+.++ ..|.|.|+|||.+.+++. ||||+.||+|+|+++|+++++..+
T Consensus 156 ~vmLFDEPTSALDPElv~EVL~vm~~LA~eGmTMivVTHEM~FAr~VadrviFmd~G~iie~g~p~~~f~~ 226 (240)
T COG1126 156 KVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMIIVTHEMGFAREVADRVIFMDQGKIIEEGPPEEFFDN 226 (240)
T ss_pred CEEeecCCcccCCHHHHHHHHHHHHHHHHcCCeEEEEechhHHHHHhhheEEEeeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999886 468999999999999988 999999999999999999999876
No 109
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=1.2e-46 Score=423.05 Aligned_cols=194 Identities=30% Similarity=0.395 Sum_probs=161.9
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|.++||+|.|++.+ .+++++||-|.++++||+|||||+|||||++++.|...|+.|.|.-.-. -++
T Consensus 389 vi~~~nv~F~y~~~~--~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~p~~G~vs~~~H-----------~~~ 455 (614)
T KOG0927|consen 389 VIMVQNVSFGYSDNP--MIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQPTIGMVSRHSH-----------NKL 455 (614)
T ss_pred eEEEeccccCCCCcc--hhhhhhhcccCcccceeEecCCCCchhhhHHHHhhcccccccccccccc-----------ccc
Confidence 699999999997543 6899999999999999999999999999999999999999999865432 224
Q ss_pred EEEecCC---CCCcccHHHHHccCCCC-CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1057 ALVSQEP---TLFAGTIRQNIVYGKEV-ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1057 ~~V~Qdp---~LF~gTIreNl~~~~~~-~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
++..|.- .-++.|.-|++..--++ -..+++...+...|+...... .++ .+||+|||.||++||.++
T Consensus 456 ~~y~Qh~~e~ldl~~s~le~~~~~~~~~~~~e~~r~ilgrfgLtgd~q~------~p~----~~LS~Gqr~rVlFa~l~~ 525 (614)
T KOG0927|consen 456 PRYNQHLAEQLDLDKSSLEFMMPKFPDEKELEEMRSILGRFGLTGDAQV------VPM----SQLSDGQRRRVLFARLAV 525 (614)
T ss_pred hhhhhhhHhhcCcchhHHHHHHHhccccchHHHHHHHHHHhCCCccccc------cch----hhcccccchhHHHHHHHh
Confidence 4444543 35677888888754443 456778888888877644332 233 479999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQ 1195 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~ 1195 (1224)
++|.||||||||++||.++-..+.++|.++ ..+||+|||+...|.+ +++|.+.+||.+...
T Consensus 526 kqP~lLlLDEPtnhLDi~tid~laeaiNe~--~Ggvv~vSHDfrlI~qVaeEi~~c~~~~~~~~ 587 (614)
T KOG0927|consen 526 KQPHLLLLDEPTNHLDIETIDALAEAINEF--PGGVVLVSHDFRLISQVAEEIWVCENGTVTKW 587 (614)
T ss_pred cCCcEEEecCCCcCCCchhHHHHHHHHhcc--CCceeeeechhhHHHHHHHHhHhhccCceeec
Confidence 999999999999999999999999999987 5699999999999988 999999999988653
No 110
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.6e-46 Score=414.46 Aligned_cols=235 Identities=44% Similarity=0.730 Sum_probs=217.1
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|+.+ ..++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (237)
T cd03252 1 ITFEHVRFRYKPD-GPVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVG 79 (237)
T ss_pred CEEEEEEEecCCC-CccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEE
Confidence 5789999999642 346999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 047171 1058 LVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMI 1137 (1224)
Q Consensus 1058 ~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~I 1137 (1224)
|+||++.+|+.|++|||.++.+..+.+++.++++..++.+++..+|.|+++.....+.+||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~l 159 (237)
T cd03252 80 VVLQENVLFNRSIRDNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRI 159 (237)
T ss_pred EEcCCchhccchHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCE
Confidence 99999999999999999987554456677778888889999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHH
Q 047171 1138 LLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIK 1215 (1224)
Q Consensus 1138 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~ 1215 (1224)
|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|+++++++. .+.|..++.
T Consensus 160 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~~ 235 (237)
T cd03252 160 LIFDEATSALDYESEHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE--NGLYAYLYQ 235 (237)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc--cChHHHHHh
Confidence 9999999999999999999999998778999999999999988999999999999999999999886 678887764
No 111
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-47 Score=391.46 Aligned_cols=223 Identities=32% Similarity=0.481 Sum_probs=191.6
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+|+|||++|. +..+++|+||+|++||.+.++|||||||||+++++.|+++|++|+|+|||.++++++..+||++||
T Consensus 2 I~~~nvsk~y~---~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IG 78 (309)
T COG1125 2 IEFENVSKRYG---NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIG 78 (309)
T ss_pred ceeeeeehhcC---CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhh
Confidence 79999999996 456999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCCc-ccHHHHHccCC--CCCCHHHH----HHHHHHHhHH--HHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGK--EVATEAEI----RKAAVLANAH--EFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~--~~~~deei----~~al~~a~l~--~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
||-|..-||. .||.|||.+-- ...+.+++ .+.++++++. +|. ..-+..|||||+||+.+|
T Consensus 79 YviQqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~-----------~RyP~eLSGGQQQRVGv~ 147 (309)
T COG1125 79 YVIQQIGLFPHLTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYA-----------DRYPHELSGGQQQRVGVA 147 (309)
T ss_pred hhhhhcccCCCccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHh-----------hcCchhcCcchhhHHHHH
Confidence 9999999996 79999998641 13344444 3444444442 233 344568999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChhHHhhcC
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQ-KADNIVVIKNGKVVEQGTQSSLLSMG 1205 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~aD~I~vl~~G~Ive~Gt~~eLl~~~ 1205 (1224)
|||..+|+|||+|||.+|||+-++..+|+-+.+.-+ ++|+|+|||++++.- -+|||+||++|+|+.+|+|+++++++
T Consensus 148 RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 148 RALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred HHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 999999999999999999999999999999877643 899999999999865 59999999999999999999999984
Q ss_pred CCchhHHHH
Q 047171 1206 NGGAYYSLI 1214 (1224)
Q Consensus 1206 ~~g~y~~l~ 1214 (1224)
.+.+-.+++
T Consensus 228 an~FV~~f~ 236 (309)
T COG1125 228 ANDFVEDFF 236 (309)
T ss_pred cHHHHHHHh
Confidence 443333443
No 112
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=5e-46 Score=414.56 Aligned_cols=241 Identities=32% Similarity=0.513 Sum_probs=222.4
Q ss_pred CcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHh
Q 047171 974 TKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLR 1053 (1224)
Q Consensus 974 ~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR 1053 (1224)
..|.|+++|++++|+.. +.++|+|+||+|+|||.+||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|
T Consensus 16 ~~~~i~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 16 LGGEIKIHDLCVRYENN-LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred CCceEEEEEEEEEeCCC-CCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 45789999999999642 24699999999999999999999999999999999999999999999999999998888999
Q ss_pred cceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1054 SCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
++++|++|+|.+|++|++||+.+.. ...+++++++++.+++.+++..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~-~~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPEC-KCTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCC-CCCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999998653 234667888888899999999999999999999999999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHH
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l 1213 (1224)
+|++|||||||++||+++++.+.+.+++..+++|+|++||+++.+..||+|++|++|++++.|+++++++. .++.|+.+
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~-~~~~~~~~ 252 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQ-EDGVFASL 252 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhc-cchHHHHH
Confidence 99999999999999999999999999987778999999999999988999999999999999999999876 46788888
Q ss_pred HHHh
Q 047171 1214 IKMQ 1217 (1224)
Q Consensus 1214 ~~~q 1217 (1224)
+..+
T Consensus 253 ~~~~ 256 (257)
T cd03288 253 VRTD 256 (257)
T ss_pred Hhcc
Confidence 7654
No 113
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6e-45 Score=401.92 Aligned_cols=235 Identities=52% Similarity=0.803 Sum_probs=217.1
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 l~~~~l~~~~~~--~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~ 78 (236)
T cd03253 1 IEFENVTFAYDP--GRPVLKDVSFTIPAGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIG 78 (236)
T ss_pred CEEEEEEEEeCC--CCceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 478999999963 245899999999999999999999999999999999999999999999999999888888999999
Q ss_pred EEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 047171 1058 LVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMI 1137 (1224)
Q Consensus 1058 ~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~I 1137 (1224)
|+||++.+|++|++||+.++....+++++..+++.+++.+.+..+|.|+++.+...+.+||||||||++|||||+++|++
T Consensus 79 ~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~l 158 (236)
T cd03253 79 VVPQDTVLFNDTIGYNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPI 158 (236)
T ss_pred EECCCChhhcchHHHHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655567778888888899999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHHH
Q 047171 1138 LLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIKM 1216 (1224)
Q Consensus 1138 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~~ 1216 (1224)
|||||||++||+++.+.+.+.|.+..+++|+|++||+++.+..||++++|++|++++.|+.+++... .+.|..++..
T Consensus 159 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~--~~~~~~~~~~ 235 (236)
T cd03253 159 LLLDEATSALDTHTEREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK--GGLYAEMWKA 235 (236)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc--ccHHHHHHhc
Confidence 9999999999999999999999988778899999999999988999999999999999999999875 6777776653
No 114
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=4.9e-45 Score=406.50 Aligned_cols=225 Identities=26% Similarity=0.422 Sum_probs=205.8
Q ss_pred ccEEEEeEEEECCC--C----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhccc
Q 047171 326 GEIEFKDVDFSYPT--R----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQM 393 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~--~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 393 (1224)
|.|+++||+|+|++ . +++++++|+|+||||||||+++|+|+++ ++|+|++||.++..++...+|+.|
T Consensus 1 g~i~~~nls~~~~~~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~-~~G~I~i~g~~i~~~~~~~lr~~i 79 (275)
T cd03289 1 GQMTVKDLTAKYTEGGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN-TEGDIQIDGVSWNSVPLQKWRKAF 79 (275)
T ss_pred CeEEEEEEEEEeCCCCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC-CCcEEEECCEEhhhCCHHHHhhhE
Confidence 45888888888852 1 2567999999999999999999999998 799999999999999999999999
Q ss_pred EEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 047171 394 GLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPK 473 (1224)
Q Consensus 394 ~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ 473 (1224)
+||||+|.+|++|+++|+....+ .++++++++++.+++++++.++|.|++|.++++|.+||||||||++||||++++|+
T Consensus 80 ~~v~q~~~lf~~tv~~nl~~~~~-~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~qrl~LaRall~~p~ 158 (275)
T cd03289 80 GVIPQKVFIFSGTFRKNLDPYGK-WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHKQLMCLARSVLSKAK 158 (275)
T ss_pred EEECCCcccchhhHHHHhhhccC-CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 99999999999999999964322 46788999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHHHHH
Q 047171 474 ILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMV 553 (1224)
Q Consensus 474 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~ 553 (1224)
||||||||++||+++.+.+++.|.+..+++|+|+||||++++..||+|++|++|++++.|++++|++. .+.|++++
T Consensus 159 illlDEpts~LD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~dri~vl~~G~i~~~g~~~~l~~~----~~~~~~~~ 234 (275)
T cd03289 159 ILLLDEPSAHLDPITYQVIRKTLKQAFADCTVILSEHRIEAMLECQRFLVIEENKVRQYDSIQKLLNE----KSHFKQAI 234 (275)
T ss_pred EEEEECccccCCHHHHHHHHHHHHHhcCCCEEEEEECCHHHHHhCCEEEEecCCeEeecCCHHHHhhC----cHHHHHHH
Confidence 99999999999999999999999987778999999999999989999999999999999999999986 66777776
Q ss_pred HHH
Q 047171 554 QLQ 556 (1224)
Q Consensus 554 ~~~ 556 (1224)
...
T Consensus 235 ~~~ 237 (275)
T cd03289 235 SPS 237 (275)
T ss_pred hhc
Confidence 544
No 115
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.5e-45 Score=401.06 Aligned_cols=232 Identities=56% Similarity=0.882 Sum_probs=213.3
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|+++ +.++|+|+||++++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|+.++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (234)
T cd03251 1 VEFKNVTFRYPGD-GPPVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIG 79 (234)
T ss_pred CEEEEEEEEeCCC-CccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEE
Confidence 5789999999643 236999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 047171 1058 LVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMI 1137 (1224)
Q Consensus 1058 ~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~I 1137 (1224)
|+||++.+|+.|++||+.++....+.+++.+.++..++.+++..+|.|+++..+..+.+||||||||++|||||+++|++
T Consensus 80 ~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 159 (234)
T cd03251 80 LVSQDVFLFNDTVAENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPI 159 (234)
T ss_pred EeCCCCeeccccHHHHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987655566677777888889999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHH
Q 047171 1138 LLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYS 1212 (1224)
Q Consensus 1138 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~ 1212 (1224)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+++++... .+.|+.
T Consensus 160 llLDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~ 232 (234)
T cd03251 160 LILDEATSALDTESERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ--GGVYAK 232 (234)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc--Ccchhh
Confidence 9999999999999999999999998888999999999999988999999999999999999999875 455544
No 116
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=7.5e-45 Score=401.48 Aligned_cols=235 Identities=64% Similarity=0.954 Sum_probs=214.0
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++..+.++|+|+||++++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|++++
T Consensus 1 l~i~~l~~~~~~~~~~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 80 (238)
T cd03249 1 IEFKNVSFRYPSRPDVPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIG 80 (238)
T ss_pred CeEEEEEEecCCCCCccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEE
Confidence 47899999997533356999999999999999999999999999999999999999999999999998888888888999
Q ss_pred EEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 047171 1058 LVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMI 1137 (1224)
Q Consensus 1058 ~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~I 1137 (1224)
|+||++.+|+.|++||+.++......+++.+.++..++.+++..+|.|+++.......+||||||||++||||++.+|++
T Consensus 81 ~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~l 160 (238)
T cd03249 81 LVSQEPVLFDGTIAENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKI 160 (238)
T ss_pred EECCchhhhhhhHHHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999999987555556677777788889999999999999999999999999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHHH
Q 047171 1138 LLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLI 1214 (1224)
Q Consensus 1138 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~ 1214 (1224)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||+|++|++|++++.|+.+++... .+.+++++
T Consensus 161 lllDEP~~gLD~~~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~--~~~~~~~~ 235 (238)
T cd03249 161 LLLDEATSALDAESEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ--KGVYAKLV 235 (238)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc--ChhHHHHh
Confidence 9999999999999999999999987778999999999999988999999999999999999999864 55555554
No 117
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-45 Score=379.57 Aligned_cols=208 Identities=33% Similarity=0.581 Sum_probs=179.2
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEec
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVN 397 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 397 (1224)
|+|+|||+.|.+. ++++.++++|||||||||++|+|.|+++|++|+|++||+++++++...||++||||-
T Consensus 2 I~~~nvsk~y~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept~G~I~i~g~~i~~~d~~~LRr~IGYvi 81 (309)
T COG1125 2 IEFENVSKRYGNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPTSGEILIDGEDISDLDPVELRRKIGYVI 81 (309)
T ss_pred ceeeeeehhcCCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCCCceEEECCeecccCCHHHHHHhhhhhh
Confidence 5777777777643 356799999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhcccccc--ccccCCCCCCChHHHHHHHHHHHhccCC
Q 047171 398 QEPILFST-SIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYE--TKVGQFGVQLSGGQKQRIAIARALIRDP 472 (1224)
Q Consensus 398 Q~~~lf~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~--t~~~~~g~~LSgGq~qriaiARal~~~~ 472 (1224)
|..-||+. ||.|||++-.. ..+.+++.+ .+++.+..+ |++ ....+.+++|||||+|||.+||||+.+|
T Consensus 82 QqigLFPh~Tv~eNIa~VP~L~~w~k~~i~~-----r~~ELl~lv--gL~p~~~~~RyP~eLSGGQQQRVGv~RALAadP 154 (309)
T COG1125 82 QQIGLFPHLTVAENIATVPKLLGWDKERIKK-----RADELLDLV--GLDPSEYADRYPHELSGGQQQRVGVARALAADP 154 (309)
T ss_pred hhcccCCCccHHHHHHhhhhhcCCCHHHHHH-----HHHHHHHHh--CCCHHHHhhcCchhcCcchhhHHHHHHHHhcCC
Confidence 99999976 99999987422 234444332 234455544 454 2467788999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhc
Q 047171 473 KILLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMN 542 (1224)
Q Consensus 473 ~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~ 542 (1224)
+|+++|||++||||.+...+|+.+.++.+ ++|+|+|||++++.-+ ||||.+|++|+|+..++++++++++
T Consensus 155 ~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDidEA~kLadri~vm~~G~i~Q~~~P~~il~~P 227 (309)
T COG1125 155 PILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTHDIDEALKLADRIAVMDAGEIVQYDTPDEILANP 227 (309)
T ss_pred CeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEecCHHHHHhhhceEEEecCCeEEEeCCHHHHHhCc
Confidence 99999999999999999999999987643 8999999999998755 9999999999999999999999874
No 118
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.6e-45 Score=398.36 Aligned_cols=227 Identities=49% Similarity=0.807 Sum_probs=211.7
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
+.|+++|++++|++ ..++++|+||+|++||+++|+||||||||||+++|+|+++|.+|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~--~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (229)
T cd03254 1 GEIEFENVNFSYDE--KKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSM 78 (229)
T ss_pred CeEEEEEEEEecCC--CCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhh
Confidence 36899999999963 2359999999999999999999999999999999999999999999999999988888889999
Q ss_pred eEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 047171 1056 IALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNP 1135 (1224)
Q Consensus 1056 i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p 1135 (1224)
++|+||++.+|++|++||+.++.+...++++.++++..++.+++..+|.|+++.++....+||||||||++|||||+++|
T Consensus 79 i~~~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p 158 (229)
T cd03254 79 IGVVLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDP 158 (229)
T ss_pred EEEecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999876555667788888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1136 MILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1136 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+..||+|++|++|++++.|+.++++.+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 159 KILILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999999988778999999999999988999999999999999999988764
No 119
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=9.1e-45 Score=396.27 Aligned_cols=220 Identities=38% Similarity=0.596 Sum_probs=206.6
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
|.|+++|++++|+.. +.++|+|+||+|++||.+||+||||||||||+++|+|+++|++|+|.+||.++.+.+...+|++
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (221)
T cd03244 1 GDIEFKNVSLRYRPN-LPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSR 79 (221)
T ss_pred CcEEEEEEEEecCCC-CcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhh
Confidence 468999999999742 3469999999999999999999999999999999999999999999999999998888899999
Q ss_pred eEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 047171 1056 IALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNP 1135 (1224)
Q Consensus 1056 i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p 1135 (1224)
++|+||+|.+|++|++|||.+... .+.+++.++++..++.+++..+|.|+++..++.+.+||||||||++||||++++|
T Consensus 80 i~~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p 158 (221)
T cd03244 80 ISIIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKS 158 (221)
T ss_pred EEEECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999987643 4677889999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 047171 1136 MILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1136 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt 1197 (1224)
++|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 159 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 159 KILVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999998877899999999999998899999999999999886
No 120
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-45 Score=389.91 Aligned_cols=203 Identities=34% Similarity=0.587 Sum_probs=172.7
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH---HhcccEEecCCCCCCc-
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW---LRSQMGLVNQEPILFS- 404 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r~~i~~v~Q~~~lf~- 404 (1224)
-++|||+.- ++|++.||||+||+|||||++++.++-.|++|+|.+||+|+..++... +|++||+++|++.|++
T Consensus 21 al~~vsL~I---~~GeI~GIIG~SGAGKSTLiR~iN~Le~PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLLss 97 (339)
T COG1135 21 ALDDVSLEI---PKGEIFGIIGYSGAGKSTLLRLINLLERPTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLLSS 97 (339)
T ss_pred eeccceEEE---cCCcEEEEEcCCCCcHHHHHHHHhccCCCCCceEEEcCEecccCChHHHHHHHhhccEEecccccccc
Confidence 445555544 356799999999999999999999999999999999999998887544 5789999999999997
Q ss_pred ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 047171 405 TSIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATS 482 (1224)
Q Consensus 405 ~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts 482 (1224)
.||++||+|...- .+.+++. ....+.++-+ |+....+..+.+|||||||||+|||||+.+|+||+.|||||
T Consensus 98 rTV~~NvA~PLeiag~~k~ei~-----~RV~elLelV--gL~dk~~~yP~qLSGGQKQRVaIARALa~~P~iLL~DEaTS 170 (339)
T COG1135 98 RTVFENVAFPLELAGVPKAEIK-----QRVAELLELV--GLSDKADRYPAQLSGGQKQRVAIARALANNPKILLCDEATS 170 (339)
T ss_pred chHHhhhhhhHhhcCCCHHHHH-----HHHHHHHHHc--CChhhhccCchhcCcchhhHHHHHHHHhcCCCEEEecCccc
Confidence 6999999997542 2233322 2223344444 67777888999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 483 ALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 483 ~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||+|.+.|.+.|++.. -|-|+++|||.++.++. |||+.||++|+++|+|+-.++..+
T Consensus 171 ALDP~TT~sIL~LL~~In~~lglTIvlITHEm~Vvk~ic~rVavm~~G~lvE~G~v~~vF~~ 232 (339)
T COG1135 171 ALDPETTQSILELLKDINRELGLTIVLITHEMEVVKRICDRVAVLDQGRLVEEGTVSEVFAN 232 (339)
T ss_pred cCChHHHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHhhhheEeeCCEEEEeccHHHhhcC
Confidence 999999999999998753 48999999999999998 999999999999999999999876
No 121
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=5.1e-45 Score=390.46 Aligned_cols=214 Identities=34% Similarity=0.534 Sum_probs=192.5
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.++++|++|+|+ ++++|+|+||+|++||.++|+||||||||||+++|.|+.+|.+|+|.+||.++.+++.+++-+++
T Consensus 2 ~L~~~~ls~~y~---~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~i 78 (258)
T COG1120 2 MLEVENLSFGYG---GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKL 78 (258)
T ss_pred eeEEEEEEEEEC---CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhE
Confidence 478999999996 45799999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCC-CCCcccHHHHHccCCCC----------CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1057 ALVSQEP-TLFAGTIRQNIVYGKEV----------ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1057 ~~V~Qdp-~LF~gTIreNl~~~~~~----------~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
|||||++ .-|.-||+|=+.+|+.. .+++.+.+|++..++.++..+ .-..||||||||+
T Consensus 79 a~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r-----------~~~~LSGGerQrv 147 (258)
T COG1120 79 AYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADR-----------PVDELSGGERQRV 147 (258)
T ss_pred EEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcC-----------cccccChhHHHHH
Confidence 9999996 46678999999988521 123357888999988887543 2346999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCCEEEEecChhHHh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTI-QKADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
.|||||.++|+||+||||||+||....-.+++.++++. +|+|+|+|.|++... +.||++++|++|+++.+|+|+|.+
T Consensus 148 ~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evl 227 (258)
T COG1120 148 LIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVL 227 (258)
T ss_pred HHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhc
Confidence 99999999999999999999999999999999999886 379999999999875 569999999999999999999988
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
..
T Consensus 228 T~ 229 (258)
T COG1120 228 TE 229 (258)
T ss_pred CH
Confidence 64
No 122
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-45 Score=367.48 Aligned_cols=208 Identities=33% Similarity=0.544 Sum_probs=185.5
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC-----cEEEECCEecCC--CCHHHH
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVK-----GNILLDGHKIKK--LQLKWL 389 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~-----G~i~~~g~~~~~--~~~~~~ 389 (1224)
.++++|+++.|++. ++..++|++|||||||||+++.+.|..+..+ |+|.++|+||.+ ++...+
T Consensus 7 ~~~~~~l~~yYg~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~l 86 (253)
T COG1117 7 AIEVRDLNLYYGDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVEL 86 (253)
T ss_pred eeEecceeEEECchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHH
Confidence 58899999999753 3445899999999999999999999999865 999999999975 579999
Q ss_pred hcccEEecCCCCCCcccHHHHHhcCCC-----C-CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHH
Q 047171 390 RSQMGLVNQEPILFSTSIKENILIGKP-----G-ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIA 463 (1224)
Q Consensus 390 r~~i~~v~Q~~~lf~~ti~~ni~~g~~-----~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qria 463 (1224)
|++||+|+|.|.-|+.||+||++||.. + .-++.++++++.+.+++-+.. .+.+.+..|||||+||+|
T Consensus 87 Rr~vGMVFQkPnPFp~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKD-------rL~~sa~~LSGGQQQRLc 159 (253)
T COG1117 87 RRRVGMVFQKPNPFPMSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKD-------RLHKSALGLSGGQQQRLC 159 (253)
T ss_pred HHHheeeccCCCCCCchHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHH-------HhhCCccCCChhHHHHHH
Confidence 999999999999999999999999943 1 113457788888888876542 356788899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 464 IARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 464 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||||.-+|+|||||||||||||.+...|.+.+.+++++-|+|+|||.+....+ +|+..++-+|+++|.|+.+++..+
T Consensus 160 IARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~~yTIviVTHnmqQAaRvSD~taFf~~G~LvE~g~T~~iF~~ 238 (253)
T COG1117 160 IARALAVKPEVLLMDEPTSALDPISTLKIEELITELKKKYTIVIVTHNMQQAARVSDYTAFFYLGELVEFGPTDKIFTN 238 (253)
T ss_pred HHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHhccEEEEEeCCHHHHHHHhHhhhhhcccEEEEEcCHHhhhcC
Confidence 999999999999999999999999999999999999999999999999999866 999999999999999999998875
No 123
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=9e-45 Score=415.02 Aligned_cols=227 Identities=31% Similarity=0.477 Sum_probs=191.5
Q ss_pred EEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH---Hh
Q 047171 978 IELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK---LR 1053 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~---lR 1053 (1224)
|+++||+++|+... ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++..++... +|
T Consensus 2 I~~~~lsk~y~~~~~~~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r 81 (343)
T TIGR02314 2 IKLSNITKVFHQGTKTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKAR 81 (343)
T ss_pred EEEEEEEEEECCCCcceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999996322 246999999999999999999999999999999999999999999999999999887654 58
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHH
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRla 1126 (1224)
++|+||||++.+|. .|++||+.++.. ..+. +++.++++.+++.++. ...+.+||||||||++
T Consensus 82 ~~Ig~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~-----------~~~~~~LSgGqkQRV~ 150 (343)
T TIGR02314 82 RQIGMIFQHFNLLSSRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKH-----------DSYPSNLSGGQKQRVA 150 (343)
T ss_pred cCEEEEECCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhh-----------hCChhhCCHHHHHHHH
Confidence 89999999999995 799999987532 2233 2344555555554433 3445689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
|||||+.+|++||||||||+||+.+...+.+.|++..+ +.|+|+|||+++.+.. ||+|++|++|+|+|.|++++++.
T Consensus 151 IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~ 230 (343)
T TIGR02314 151 IARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFS 230 (343)
T ss_pred HHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHc
Confidence 99999999999999999999999999999999998753 7899999999999966 99999999999999999999987
Q ss_pred cCCCchhHHHHH
Q 047171 1204 MGNGGAYYSLIK 1215 (1224)
Q Consensus 1204 ~~~~g~y~~l~~ 1215 (1224)
.+....+..+..
T Consensus 231 ~p~~~~~~~~~~ 242 (343)
T TIGR02314 231 HPKTPLAQKFIR 242 (343)
T ss_pred CCCcHHHHHHHh
Confidence 532334444443
No 124
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-44 Score=374.18 Aligned_cols=227 Identities=30% Similarity=0.461 Sum_probs=188.4
Q ss_pred cEEEEEEEEECCCCCC-ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC-HHHHhc
Q 047171 977 FIELKNVFFSYPSRPD-QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN-LRKLRS 1054 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-~~~lR~ 1054 (1224)
.++++|+++.|+.+.. .++|+||||+|.+||++||||+||||||||.++|+|+.+|++|+|.+||.++.... .+..++
T Consensus 3 ~l~v~nl~~~y~~~~~~~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~ 82 (252)
T COG1124 3 LLSVRNLSIVYGGGKFAFHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYR 82 (252)
T ss_pred eEEEeceEEEecCCcchhhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhcc
Confidence 4899999999974321 24999999999999999999999999999999999999999999999997765433 346788
Q ss_pred ceEEEecCCC--CC-cccHHHHHccCC----CCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1055 CIALVSQEPT--LF-AGTIRQNIVYGK----EVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1055 ~i~~V~Qdp~--LF-~gTIreNl~~~~----~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
.+.+|+|||. |= .-||++-|.=+. -.....+++++++.+++.+-. ....+..||||||||+||
T Consensus 83 ~VQmVFQDp~~SLnP~~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~----------l~R~P~eLSGGQ~QRiaI 152 (252)
T COG1124 83 PVQMVFQDPYSSLNPRRTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF----------LDRRPHELSGGQRQRIAI 152 (252)
T ss_pred ceeEEecCCccccCcchhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH----------HhcCchhcChhHHHHHHH
Confidence 9999999996 22 247776664221 112345678888888775432 224556799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCC--eEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGR--TCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~--TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||||.-+|++||||||||+||....+.|++.+.++.+++ |.|+|||+++.+.+ ||||+||++|+++|.++-.++...
T Consensus 153 ARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 153 ARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 999999999999999999999999999999999887654 99999999999988 999999999999999999999876
Q ss_pred CCCchhHHHH
Q 047171 1205 GNGGAYYSLI 1214 (1224)
Q Consensus 1205 ~~~g~y~~l~ 1214 (1224)
+...|.+..
T Consensus 233 -~~h~ytr~L 241 (252)
T COG1124 233 -PSHPYTREL 241 (252)
T ss_pred -CccHHHHHH
Confidence 455665443
No 125
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.9e-44 Score=368.76 Aligned_cols=224 Identities=32% Similarity=0.538 Sum_probs=192.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH---Hh
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK---LR 1053 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~---lR 1053 (1224)
.|++++|+++|. ++.||+||||+|++||.+||+|+||||||||++++.|+..|++|+|.++|.|+.+++.++ +|
T Consensus 8 ~I~vr~v~~~fG---~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir 84 (263)
T COG1127 8 LIEVRGVTKSFG---DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIR 84 (263)
T ss_pred eEEEeeeeeecC---CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHH
Confidence 699999999996 456999999999999999999999999999999999999999999999999999998654 69
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCC---CCCHHHHHHH----HHHHhHHHHHHhcccccccc-cCCCCCCCChHHHHH
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKE---VATEAEIRKA----AVLANAHEFISSTEDGYDTY-CGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~---~~~deei~~a----l~~a~l~~~I~~lp~gldt~-vge~G~~LSGGQrQR 1124 (1224)
+++|+++|+..||+ -||+||+.|... ..+++++++. ++.+ ||... ....++.||||.+.|
T Consensus 85 ~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~V-----------GL~~~~~~~~PsELSGGM~KR 153 (263)
T COG1127 85 KRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELV-----------GLRGAAADLYPSELSGGMRKR 153 (263)
T ss_pred hheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhc-----------CCChhhhhhCchhhcchHHHH
Confidence 99999999999997 599999998643 3345555442 2333 33333 223456899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
+|||||+.-+|+||++|||||+|||.+...+-+.|+++.+ +.|+++|||+++++.. ||||+++.+|+|+..||++||
T Consensus 154 vaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el 233 (263)
T COG1127 154 VALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEEL 233 (263)
T ss_pred HHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999887753 7899999999999977 899999999999999999999
Q ss_pred hhcCCCchhHHHHH
Q 047171 1202 LSMGNGGAYYSLIK 1215 (1224)
Q Consensus 1202 l~~~~~g~y~~l~~ 1215 (1224)
.+. .+-+.+++++
T Consensus 234 ~~s-d~P~v~qf~~ 246 (263)
T COG1127 234 LAS-DDPWVRQFFN 246 (263)
T ss_pred HhC-CCHHHHHHhc
Confidence 986 3555555554
No 126
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-44 Score=407.78 Aligned_cols=221 Identities=28% Similarity=0.510 Sum_probs=188.0
Q ss_pred ccEEEEEEEEECCCCC--CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCC------
Q 047171 976 GFIELKNVFFSYPSRP--DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSY------ 1047 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~------ 1047 (1224)
..|+++|++|+|+... ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.
T Consensus 20 ~~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~ 99 (320)
T PRK13631 20 IILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHEL 99 (320)
T ss_pred ceEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEcccccccccc
Confidence 3699999999997421 24699999999999999999999999999999999999999999999999998653
Q ss_pred ----------CHHHHhcceEEEecCC--CCCcccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccc-cccCC
Q 047171 1048 ----------NLRKLRSCIALVSQEP--TLFAGTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYD-TYCGE 1112 (1224)
Q Consensus 1048 ----------~~~~lR~~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gld-t~vge 1112 (1224)
+...+|++++||+|+| .+|+.|++|||.++.. ..+.++..+ .+.+++..+ |++ ...++
T Consensus 100 ~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~ 172 (320)
T PRK13631 100 ITNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLER 172 (320)
T ss_pred cccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcC
Confidence 3567899999999998 6999999999988631 233433322 123444444 554 45677
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCC
Q 047171 1113 RGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQ-KADNIVVIKNG 1190 (1224)
Q Consensus 1113 ~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~aD~I~vl~~G 1190 (1224)
.+.+||||||||++|||||+++|+|||||||||+||+.+++.+.+.|+++. +++|+|+|||+++.+. .||+|++|++|
T Consensus 173 ~~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G 252 (320)
T PRK13631 173 SPFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKG 252 (320)
T ss_pred CcccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECC
Confidence 888999999999999999999999999999999999999999999998764 5889999999999875 59999999999
Q ss_pred EEEEecChhHHhh
Q 047171 1191 KVVEQGTQSSLLS 1203 (1224)
Q Consensus 1191 ~Ive~Gt~~eLl~ 1203 (1224)
++++.|+|+++..
T Consensus 253 ~i~~~g~~~~~~~ 265 (320)
T PRK13631 253 KILKTGTPYEIFT 265 (320)
T ss_pred EEEEeCCHHHHhc
Confidence 9999999998754
No 127
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.1e-44 Score=400.53 Aligned_cols=213 Identities=35% Similarity=0.564 Sum_probs=191.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++. .+|+|+||+|+.||.++|+|||||||||++++|+|+.+|++|+|.|||.+++++++++ ++|
T Consensus 3 ~i~l~~v~K~yg~~---~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~i 77 (338)
T COG3839 3 ELELKNVRKSFGSF---EVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGI 77 (338)
T ss_pred EEEEeeeEEEcCCc---eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCE
Confidence 58999999999632 2899999999999999999999999999999999999999999999999999999886 899
Q ss_pred EEEecCCCCCc-ccHHHHHccCCCCC------CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKEVA------TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~~~------~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
++|+|+..||. .||+|||.|+.... .++++.++++..++.+.+.+.| .+||||||||+||||
T Consensus 78 amVFQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----------~~LSGGQrQRVAlaR 146 (338)
T COG3839 78 AMVFQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----------LQLSGGQRQRVALAR 146 (338)
T ss_pred EEEeCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----------ccCChhhHHHHHHHH
Confidence 99999999997 69999999985421 2456778888877777766554 579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcC
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMG 1205 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~ 1205 (1224)
||+++|+++|||||.|+||+.....+..-|+++.+ +.|+|.|||+...+.. +|||+||++|+|.+.|+|.|+..++
T Consensus 147 AlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 147 ALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred HHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 99999999999999999999999999988887543 6899999999988766 9999999999999999999999873
No 128
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=8e-44 Score=388.56 Aligned_cols=220 Identities=43% Similarity=0.725 Sum_probs=202.6
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
|.|+++|++++|+.+ +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...+|+.
T Consensus 1 ~~l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 79 (220)
T cd03245 1 GRIEFRNVSFSYPNQ-EIPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRN 79 (220)
T ss_pred CeEEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhh
Confidence 358999999999642 2469999999999999999999999999999999999999999999999999988887788899
Q ss_pred eEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 047171 1056 IALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNP 1135 (1224)
Q Consensus 1056 i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p 1135 (1224)
++|+||++.+|..|++||+.++....+++++.+.++..++.+.+...|.|++|.+.+...+||||||||++||||++.+|
T Consensus 80 i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p 159 (220)
T cd03245 80 IGYVPQDVTLFYGTLRDNITLGAPLADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDP 159 (220)
T ss_pred EEEeCCCCccccchHHHHhhcCCCCCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCC
Confidence 99999999999999999998865444566788888889999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 047171 1136 MILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1136 ~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~G 1196 (1224)
++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+..||+|++|++|++++.|
T Consensus 160 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 160 PILLLDEPTSAMDMNSEERLKERLRQLLGDKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 9999999999999999999999999887668999999999988779999999999998765
No 129
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=1.3e-40 Score=391.07 Aligned_cols=475 Identities=16% Similarity=0.161 Sum_probs=363.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCC---CCHHHHHHHHHhhHHHHHHHHHH
Q 047171 696 YCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDE---NTSAAICARLANEAHLVRSFIAD 772 (1224)
Q Consensus 696 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~---~~~g~l~~rls~d~~~i~~~~~~ 772 (1224)
.+.+|.+++.+..+....+.|+......++-.-+-+.+.++-+...-.|+.... +.+-..-.|+..|+..+-+...+
T Consensus 88 ~l~~f~~ia~~~v~~~v~~~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~~~~~~~~~dNpDQRi~eDi~~~t~~t~~ 167 (604)
T COG4178 88 QLQVFAIIAGLLVLLNVAQTWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLAQAGGIGLIDNPDQRIQEDIRNFTETTLD 167 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHhcccccCCCChHHhHHHHHHHHHhhHHH
Confidence 355677777778888888888888888888888888888888877644433211 11123457899999888776666
Q ss_pred HHHHHHHHHHHHHHHHHHHH---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 047171 773 RMSLLIQVFFSASLAYTLSL---------------LVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQL 837 (1224)
Q Consensus 773 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 837 (1224)
....++.++.+++...++.. -+.-.+.+++++.+++...+.+..++...+.+-+..+..+.....
T Consensus 168 l~~g~l~s~islisF~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~ 247 (604)
T COG4178 168 LSFGLLQSVISLISFTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYS 247 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHH
Confidence 66666666655544443333 122233344455555555555666777777777777777888888
Q ss_pred HHHHHccHHHHHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHH
Q 047171 838 ASEATTNHRTITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQ 917 (1224)
Q Consensus 838 ~~e~l~gi~tIra~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~ 917 (1224)
+.-.-++...|-.|+-|+...++.++..........+..........+......++.++-+..++-....|.++.|.++.
T Consensus 248 Lvrv~enaE~IAly~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmq 327 (604)
T COG4178 248 LVRVRENAEAIALYRGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQ 327 (604)
T ss_pred HHHHHhhHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHH
Confidence 88888899999999999888777776666655554444444444455555555555555556666778899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCC--CCCCCCCCCCC-CCC--CCCcccEEEEEEEEECCCCCC
Q 047171 918 AFFLLMSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKS--EIDPEDPKASE-DIE--EPTKGFIELKNVFFSYPSRPD 992 (1224)
Q Consensus 918 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~--~~~~~~~~~~~-~~~--~~~~g~I~~~~vsf~Y~~~~~ 992 (1224)
+-..+..+...++.+...++.+..-.+...|+.++.+.-. +.+++.+.... ... ...+..|+|+|++..-|+.
T Consensus 328 a~~aF~~v~sslswfi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~-- 405 (604)
T COG4178 328 AVGAFGQVHSSLSWFIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDG-- 405 (604)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCC--
Confidence 9999999999999999999999999999999998874322 11111111100 000 0014679999999998753
Q ss_pred ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHH
Q 047171 993 QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQ 1072 (1224)
Q Consensus 993 ~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIre 1072 (1224)
.+.++++||+|+|||.+-|.|+||||||||+++|.|+++-.+|+|..-.. ..+-|+||.|++-.||+||
T Consensus 406 ~~ll~~l~~~v~~G~~llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~-----------~~~lflpQ~PY~p~GtLre 474 (604)
T COG4178 406 QTLLSELNFEVRPGERLLITGESGAGKTSLLRALAGLWPWGSGRISMPAD-----------SALLFLPQRPYLPQGTLRE 474 (604)
T ss_pred CeeeccceeeeCCCCEEEEECCCCCCHHHHHHHHhccCccCCCceecCCC-----------CceEEecCCCCCCCccHHH
Confidence 46899999999999999999999999999999999999999999876521 3489999999999999999
Q ss_pred HHccCCCC--CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHH
Q 047171 1073 NIVYGKEV--ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSA 1150 (1224)
Q Consensus 1073 Nl~~~~~~--~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~ 1150 (1224)
-|+|.+.. .+|+++.+++.+|++.+++.++.+- ..-..-||+||||||++||.++++|++++|||||||||++
T Consensus 475 ~l~YP~~~~~~~d~~l~~vL~~vgL~~L~~rl~~~-----~~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~ 549 (604)
T COG4178 475 ALCYPNAAPDFSDAELVAVLHKVGLGDLAERLDEE-----DRWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEE 549 (604)
T ss_pred HHhCCCCCCCCChHHHHHHHHHcCcHHHHHHHhcc-----CcHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChH
Confidence 99998653 8999999999999999999987532 2245679999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEe
Q 047171 1151 SENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIK 1188 (1224)
Q Consensus 1151 te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~ 1188 (1224)
+|..+.+.+++.+.+.|+|.|+||.......++.+-+.
T Consensus 550 ~e~~l~q~l~~~lp~~tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 550 TEDRLYQLLKEELPDATVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred HHHHHHHHHHhhCCCCEEEEeccchhhHHHHhhheeec
Confidence 99999999999999999999999998888877766654
No 130
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.7e-43 Score=395.78 Aligned_cols=211 Identities=27% Similarity=0.327 Sum_probs=169.3
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
..+++.+|+|.|+..+ .+.+.+++++++.-.++++||++|+||||+++++.+-..|..|.+-+.+ |.+
T Consensus 361 p~l~i~~V~f~y~p~~-y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~~~rgi~~~~~-----------r~r 428 (582)
T KOG0062|consen 361 PNLRISYVAFEYTPSE-YQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLTPTRGIVGRHP-----------RLR 428 (582)
T ss_pred CeeEEEeeeccCCCcc-hhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCCcccceeeecc-----------cce
Confidence 3699999999997442 2789999999999999999999999999999999999999999998877 478
Q ss_pred eEEEecCCCC-CcccHHH--HHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCC-CCCChHHHHHHHHHHHH
Q 047171 1056 IALVSQEPTL-FAGTIRQ--NIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERG-VQLSGGQKQRIALARAV 1131 (1224)
Q Consensus 1056 i~~V~Qdp~L-F~gTIre--Nl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G-~~LSGGQrQRlaLARAl 1131 (1224)
|+|-.|..+= ++-.+-. -+.-..|..+++|+++.|...|+.. ++.-.+ ..||||||-|+++|-+.
T Consensus 429 i~~f~Qhhvd~l~~~v~~vd~~~~~~pG~~~ee~r~hl~~~Gl~g-----------~la~~si~~LSGGQKsrvafA~~~ 497 (582)
T KOG0062|consen 429 IKYFAQHHVDFLDKNVNAVDFMEKSFPGKTEEEIRRHLGSFGLSG-----------ELALQSIASLSGGQKSRVAFAACT 497 (582)
T ss_pred ecchhHhhhhHHHHHhHHHHHHHHhCCCCCHHHHHHHHHhcCCCc-----------hhhhccccccCCcchhHHHHHHHh
Confidence 9999998753 2332221 1111124458999999887765544 333333 56999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchh
Q 047171 1132 LKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAY 1210 (1224)
Q Consensus 1132 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y 1210 (1224)
..+|.+|+|||||.+||.++-..+-++|+.+ +.-||+|||+.+.+.. |+.++|.++|+|.-. +. .-..|
T Consensus 498 ~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F--~GGVv~VSHd~~fi~~~c~E~Wvve~g~vt~i-------eg-~~~~y 567 (582)
T KOG0062|consen 498 WNNPHLLVLDEPTNHLDRDSLGALAKALKNF--NGGVVLVSHDEEFISSLCKELWVVEDGKVTPI-------EG-GIDKY 567 (582)
T ss_pred cCCCcEEEecCCCccccHHHHHHHHHHHHhc--CCcEEEEECcHHHHhhcCceeEEEcCCcEEee-------ec-cHHHH
Confidence 9999999999999999999999999999876 4579999999999988 999999999999752 10 01247
Q ss_pred HHHHHHhhc
Q 047171 1211 YSLIKMQAS 1219 (1224)
Q Consensus 1211 ~~l~~~q~~ 1219 (1224)
.++...+..
T Consensus 568 Kkl~~~e~~ 576 (582)
T KOG0062|consen 568 KKLLGAELR 576 (582)
T ss_pred HHHHHHHHh
Confidence 777666543
No 131
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=3.3e-44 Score=350.12 Aligned_cols=209 Identities=34% Similarity=0.509 Sum_probs=188.5
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|.+++|.|+|..- + =.++++|++||+|||+||||||||||++++.||..|.+|+|.|||+|....++. ++-++
T Consensus 2 l~L~~V~~~y~~~---~--~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~--~RPVS 74 (231)
T COG3840 2 LALDDVRFSYGHL---P--MRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPA--ERPVS 74 (231)
T ss_pred ccccceEEeeCcc---e--EEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCcc--cCChh
Confidence 5678999999643 1 368999999999999999999999999999999999999999999999876664 57899
Q ss_pred EEecCCCCCc-ccHHHHHccCCC------CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKE------VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~------~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
+++||..||. -||.+|+.+|.. ....+.+..++..+++.+|..++|. +||||||||+||||+
T Consensus 75 mlFQEnNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARc 143 (231)
T COG3840 75 MLFQENNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARC 143 (231)
T ss_pred hhhhccccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHH
Confidence 9999999997 699999999853 1234678999999999999999884 599999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|+|+.+||+||||.|+||+.-++.+...+..++ ++.|+++|||.++.++. +|+++++++|||.++|.-+++++.
T Consensus 144 lvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 144 LVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred HhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 999999999999999999999999999998876 46799999999999876 999999999999999999999874
No 132
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.3e-44 Score=382.98 Aligned_cols=215 Identities=37% Similarity=0.622 Sum_probs=193.3
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCC-CCCHHHHhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIK-SYNLRKLRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~-~~~~~~lR~~ 1055 (1224)
.++++|++|+|+++ .++|+|+||+|++||.++|+|+||||||||+++|.|+++|++|.|.+||.++. +.+...+|++
T Consensus 3 ~i~~~~l~~~y~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~ 80 (235)
T COG1122 3 MIEAENLSFRYPGR--KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQK 80 (235)
T ss_pred eEEEEEEEEEcCCC--ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcc
Confidence 48999999999855 57999999999999999999999999999999999999999999999999998 4889999999
Q ss_pred eEEEecCC--CCCcccHHHHHccCCC--CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1056 IALVSQEP--TLFAGTIRQNIVYGKE--VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1056 i~~V~Qdp--~LF~gTIreNl~~~~~--~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
+|+|+|+| .+|..||.|.+.||.. ..+.++ +.++++.+++.++. .....+||||||||+||
T Consensus 81 vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~-----------~r~p~~LSGGqkqRvaI 149 (235)
T COG1122 81 VGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELL-----------DRPPFNLSGGQKQRVAI 149 (235)
T ss_pred eEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhc-----------cCCccccCCcceeeHHh
Confidence 99999999 7999999999999843 334444 55666677666553 24456899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|.+|..+|++||||||||+||+...+.+.+.++++.+ ++|+|+|||+++.+.. |||++||++|+++.+|+|+++.+.
T Consensus 150 A~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 150 AGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred hHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999999999999864 4799999999999987 999999999999999999999875
No 133
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-40 Score=360.09 Aligned_cols=473 Identities=21% Similarity=0.285 Sum_probs=360.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccCCCCHHHHHHHHHhhHHHHHHHHHHHHH
Q 047171 696 YCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQDENTSAAICARLANEAHLVRSFIADRMS 775 (1224)
Q Consensus 696 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~~~~~g~l~~rls~d~~~i~~~~~~~~~ 775 (1224)
+...++++.++..+.+.+.......++++...++|.++.++++..|+..++ +-..++++.++++|+..+. +....++
T Consensus 50 ~l~~f~~llllf~~ss~is~lg~t~~gq~~I~klr~~~~~kil~tplerie--r~~~~rlla~L~~Dvr~IS-f~~s~lp 126 (546)
T COG4615 50 VLPEFLGLLLLFMVSSLISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIE--RLGSARLLAGLTSDVRNIS-FAFSRLP 126 (546)
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH--Hhcccchhhhhccccccee-ehHhhhH
Confidence 444556666667777777888888999999999999999999999999999 5679999999999999998 5566788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHHHHHhcc--
Q 047171 776 LLIQVFFSASLAYTLSLLVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRTITAFSS-- 853 (1224)
Q Consensus 776 ~~~~~~~~~~~~~~~~~~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~tIra~~~-- 853 (1224)
.+.++....+++.+...+.++.+.+++++.+.+.+...++...+..+..+..++..+++..+.+..++|.+..+...-
T Consensus 127 ~~~qa~il~l~s~aYLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~ 206 (546)
T COG4615 127 ELVQAIILTLGSAAYLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERA 206 (546)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHH
Confidence 899999999999999999999998888888887777777777777777778888889999999999999999876643
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHH
Q 047171 854 QDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIMNQGLVSPKQLFQAFFLLMSTGKNIADAG 933 (1224)
Q Consensus 854 e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~t~~~~~~~~~~~~~~~~~~~~~~ 933 (1224)
+..+.+.|...-+...+...+...+.....-..+.+....+.+.+|....... -+.....+..+.+.+...|+.++.
T Consensus 207 ~~~h~~~~~~~a~~~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~w---~st~~a~tivlvlLflr~pL~s~v 283 (546)
T COG4615 207 EYVHNNLYIPDAQEYRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLGW---ASTNVAATIVLVLLFLRTPLLSAV 283 (546)
T ss_pred HHHHhhhcCcchHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc---chhhHHHHHHHHHHHHhhHHHHHH
Confidence 22223333322222222111111111122233344444555555665543322 222223334445566678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCCCCCCCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEc
Q 047171 934 SMTSDIAKGSSAIRTIFTILDRKSEIDPEDPKASEDIEEPTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVG 1013 (1224)
Q Consensus 934 ~~~~~~~~~~~a~~ri~~~~~~~~~~~~~~~~~~~~~~~~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG 1013 (1224)
..++.+..+.+|.+++.++-..++..+-..+. +.|.-..|+++||.|+|++. .--+..||++|++||.|=|+|
T Consensus 284 gilP~l~~AqvA~~kiakle~~~~~a~~~~~q-----~~p~~~~lelrnvrfay~~~--~FhvgPiNl~ikrGelvFliG 356 (546)
T COG4615 284 GILPTLLTAQVAFNKIAKLELAPYKADFPRPQ-----AFPDWKTLELRNVRFAYQDN--AFHVGPINLTIKRGELVFLIG 356 (546)
T ss_pred hhhhHHHHHHHHHHHHHHhhcCCccccCCCCC-----cCCcccceeeeeeeeccCcc--cceecceeeEEecCcEEEEEC
Confidence 99999999999999999986643322211111 11223469999999999743 235789999999999999999
Q ss_pred CCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHH
Q 047171 1014 QSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLA 1093 (1224)
Q Consensus 1014 ~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a 1093 (1224)
.|||||||++++|.|+|.|++|+|++||.+++.-+++++|+-++-|+-|-+||+.++- ++..++.+.+..-++.-
T Consensus 357 ~NGsGKST~~~LLtGL~~PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll~-----~e~~as~q~i~~~LqrL 431 (546)
T COG4615 357 GNGSGKSTLAMLLTGLYQPQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLLG-----PEGKASPQLIEKWLQRL 431 (546)
T ss_pred CCCCcHHHHHHHHhcccCCCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhhC-----CccCCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999986541 11225666665544433
Q ss_pred hHHHHHHhcccccccccCCC---CCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeE
Q 047171 1094 NAHEFISSTEDGYDTYCGER---GVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTC 1168 (1224)
Q Consensus 1094 ~l~~~I~~lp~gldt~vge~---G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~Tv 1168 (1224)
.+.. .|.+.++ ...||-|||.|+|+--|++.+.||++|||=-+.-||.=++...+.+--.. .|||+
T Consensus 432 el~~---------ktsl~d~~fs~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI 502 (546)
T COG4615 432 ELAH---------KTSLNDGRFSNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTI 502 (546)
T ss_pred HHhh---------hhcccCCcccccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeE
Confidence 3322 2233222 24799999999999999999999999999999999999999888775443 59999
Q ss_pred EEEccCchhhhhcCEEEEEeCCEEEEe
Q 047171 1169 VVVAHRLSTIQKADNIVVIKNGKVVEQ 1195 (1224)
Q Consensus 1169 I~IaHrl~ti~~aD~I~vl~~G~Ive~ 1195 (1224)
+.|||+-.....|||++.|++|+++|.
T Consensus 503 ~aIsHDd~YF~~ADrll~~~~G~~~e~ 529 (546)
T COG4615 503 FAISHDDHYFIHADRLLEMRNGQLSEL 529 (546)
T ss_pred EEEecCchhhhhHHHHHHHhcCceeec
Confidence 999999999999999999999999985
No 134
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.7e-42 Score=423.76 Aligned_cols=197 Identities=24% Similarity=0.412 Sum_probs=165.9
Q ss_pred CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC--CCceEEECCccCCCCCHHHHhcceEEEecCC-CCCcc
Q 047171 992 DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP--QSGSVMVDERNIKSYNLRKLRSCIALVSQEP-TLFAG 1068 (1224)
Q Consensus 992 ~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p--~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp-~LF~g 1068 (1224)
.+..|+|||=-++||..+|++|+||||||||++.|.|=-.- .+|+|+|||.+..+ +..++.+|||.|++ |+-.-
T Consensus 803 ~~qLL~~V~G~~kPG~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q---~tF~R~~GYvqQ~DiH~~~~ 879 (1391)
T KOG0065|consen 803 TRQLLNNVSGAFKPGVLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQ---ETFARVSGYVEQQDIHSPEL 879 (1391)
T ss_pred ceEhhhcCceEecCCceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCch---hhhccccceeecccccCccc
Confidence 35689999999999999999999999999999999985432 37999999998765 78999999999987 56567
Q ss_pred cHHHHHccCC-----CCCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCC-CEE
Q 047171 1069 TIRQNIVYGK-----EVATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNP-MIL 1138 (1224)
Q Consensus 1069 TIreNl~~~~-----~~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p-~IL 1138 (1224)
||||-|.|.. ++.+++| ++++.+..++.++ =|..||..|..||..||.||.||=-|+.|| .||
T Consensus 880 TVrESL~fSA~LRlp~~v~~~ek~~yVe~Vi~lleL~~~-------~daiVG~~G~GLs~eQRKrLTIgVELvA~P~~il 952 (1391)
T KOG0065|consen 880 TVRESLRFSAALRLPKEVSDEEKYEYVEEVIELLELKEY-------ADALVGLPGSGLSTEQRKRLTIGVELVANPSSIL 952 (1391)
T ss_pred chHHHHHHHHHHcCCCcCCHHHHHHHHHHHHHHhCchhh-------hhhhccCCCCCCCHHHhceeeEEEEEecCCceeE
Confidence 9999998752 2344443 3445555554443 356799999999999999999999999999 899
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchh--hhhcCEEEEEe-CCEEEEecCh
Q 047171 1139 LLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLST--IQKADNIVVIK-NGKVVEQGTQ 1198 (1224)
Q Consensus 1139 lLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t--i~~aD~I~vl~-~G~Ive~Gt~ 1198 (1224)
+||||||+||+++...|.+.++++. .|+|+++.=|.++. .+..|+++.|+ .|+.+-.|+.
T Consensus 953 FLDEPTSGLDsqaA~~i~~~lrkla~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~l 1016 (1391)
T KOG0065|consen 953 FLDEPTSGLDSQAAAIVMRFLRKLADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPL 1016 (1391)
T ss_pred EecCCCCCccHHHHHHHHHHHHHHHhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCc
Confidence 9999999999999999999999876 69999999999985 46799999996 5889988864
No 135
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=5.6e-44 Score=348.53 Aligned_cols=201 Identities=33% Similarity=0.538 Sum_probs=177.9
Q ss_pred EEEEeEEEECCCC--------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCC
Q 047171 328 IEFKDVDFSYPTR--------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQE 399 (1224)
Q Consensus 328 i~~~~v~f~y~~~--------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~ 399 (1224)
|.+++|.|+|... +.++++||+||||||||||+++|+||..|.+|+|+|+|+|....++.+ +-+++++||
T Consensus 2 l~L~~V~~~y~~~~~~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~~G~i~i~g~d~t~~~P~~--RPVSmlFQE 79 (231)
T COG3840 2 LALDDVRFSYGHLPMRFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPASGEILINGVDHTASPPAE--RPVSMLFQE 79 (231)
T ss_pred ccccceEEeeCcceEEEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCCCceEEEcCeecCcCCccc--CChhhhhhc
Confidence 4677888888643 467899999999999999999999999999999999999998776653 569999999
Q ss_pred CCCCcc-cHHHHHhcCCC-C-----CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 047171 400 PILFST-SIKENILIGKP-G-----ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDP 472 (1224)
Q Consensus 400 ~~lf~~-ti~~ni~~g~~-~-----~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~ 472 (1224)
..||.. ||++||.+|.. . ...+.+..++...++.++.+++|. +||||||||+||||+|+++-
T Consensus 80 nNLFaHLtV~qNigLGl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP~-----------~LSGGqRQRvALARclvR~~ 148 (231)
T COG3840 80 NNLFAHLTVAQNIGLGLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLPG-----------ELSGGQRQRVALARCLVREQ 148 (231)
T ss_pred cccchhhhhhhhhcccCCcccccCHHHHHHHHHHHHHhChhhHhhhCcc-----------ccCchHHHHHHHHHHHhccC
Confidence 999976 99999999963 2 224678888899999999888874 79999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 473 KILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 473 ~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||+||||+|+|||.-...+...+.++. ++.|++||||.++.++. +|+++++++|||.++|+.+++...
T Consensus 149 PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~Da~~ia~~~~fl~~Gri~~~g~~~~~~~~ 220 (231)
T COG3840 149 PILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPEDAARIADRVVFLDNGRIAAQGSTQELLSG 220 (231)
T ss_pred CeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHHhhhceEEEeCCEEEeeccHHHHhcc
Confidence 9999999999999999888888887653 57899999999999976 999999999999999999998865
No 136
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-43 Score=375.57 Aligned_cols=210 Identities=30% Similarity=0.517 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++|+|.++ +||+||||+|++|+.+||+||||||||||+++++|+.+|++|+|.++|.++++... +.+|
T Consensus 4 ~i~v~nl~v~y~~~---~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~I 77 (254)
T COG1121 4 MIEVENLTVSYGNR---PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRI 77 (254)
T ss_pred EEEEeeeEEEECCE---eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeE
Confidence 59999999999632 59999999999999999999999999999999999999999999999998766433 5789
Q ss_pred EEEecCC---CCCcccHHHHHccCCCC----------CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1057 ALVSQEP---TLFAGTIRQNIVYGKEV----------ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1057 ~~V~Qdp---~LF~gTIreNl~~~~~~----------~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
|||||.. +=|.-||+|=+.+|+.. .+.+++.+|++.+++.++. |-++|+ |||||+|
T Consensus 78 gYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~-------~r~i~~----LSGGQ~Q 146 (254)
T COG1121 78 GYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLR-------DRQIGE----LSGGQKQ 146 (254)
T ss_pred EEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhh-------CCcccc----cCcHHHH
Confidence 9999965 46788999999887421 1348899999999999875 345554 9999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV-GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
|+.|||||+++|++|+|||||+++|+.++..+.+.|+++.+ ||||++|+|+++.+.. ||+|+.|. +++...|++++.
T Consensus 147 RV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~Ln-~~~~~~G~~~~~ 225 (254)
T COG1121 147 RVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICLN-RHLIASGPPEEV 225 (254)
T ss_pred HHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEEc-CeeEeccChhhc
Confidence 99999999999999999999999999999999999999874 8999999999999866 99999885 788899999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
+..
T Consensus 226 ~~~ 228 (254)
T COG1121 226 LTE 228 (254)
T ss_pred cCH
Confidence 863
No 137
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-43 Score=363.59 Aligned_cols=213 Identities=33% Similarity=0.537 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC---HHHHh
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN---LRKLR 1053 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~---~~~lR 1053 (1224)
.|+++||+.+||+ ++.+|+||||+|++||.|||+||||||||||++.|.|+.+|++|+|.++|.++.... ++.+|
T Consensus 3 ~i~~~nl~k~yp~--~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r 80 (258)
T COG3638 3 MIEVKNLSKTYPG--GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLR 80 (258)
T ss_pred eEEEeeeeeecCC--CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHH
Confidence 4899999999984 467999999999999999999999999999999999999999999999999998887 66789
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCC-----------CCCHH---HHHHHHHHHhHHHHHHhcccccccccCCCCCCCC
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKE-----------VATEA---EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLS 1118 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~-----------~~~de---ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1118 (1224)
++||+|+|.+.|-. .|+-+|+..|+- -.+.+ ...+|++.+++.++.. .+..+||
T Consensus 81 ~~iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~-----------qra~~LS 149 (258)
T COG3638 81 RDIGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAY-----------QRASTLS 149 (258)
T ss_pred HhceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHH-----------HHhccCC
Confidence 99999999999875 699999987742 12333 3455666666665532 4556899
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 047171 1119 GGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQ 1195 (1224)
Q Consensus 1119 GGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~ 1195 (1224)
|||+||++|||||.++|+|+|-|||+|+|||.+.+.|++.|++.. .|.|+|+.-|.++..+. ||||+-|++|+|+..
T Consensus 150 GGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfD 229 (258)
T COG3638 150 GGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFD 229 (258)
T ss_pred cchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEe
Confidence 999999999999999999999999999999999999999998765 57899999999999876 999999999999999
Q ss_pred cChhHHh
Q 047171 1196 GTQSSLL 1202 (1224)
Q Consensus 1196 Gt~~eLl 1202 (1224)
|++.||-
T Consensus 230 g~~~el~ 236 (258)
T COG3638 230 GPASELT 236 (258)
T ss_pred CChhhhh
Confidence 9999964
No 138
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1e-43 Score=371.85 Aligned_cols=197 Identities=33% Similarity=0.523 Sum_probs=172.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.+++++|+.+|+. ..||+|+||+|++||.|+|+||||||||||++++.|+.+|++|+|.++|.++... ...+
T Consensus 3 ~l~i~~v~~~f~~---~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~ 74 (248)
T COG1116 3 LLEIEGVSKSFGG---VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDI 74 (248)
T ss_pred eEEEEeeEEEeCc---eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCE
Confidence 4899999999964 5799999999999999999999999999999999999999999999999987543 3569
Q ss_pred EEEecCCCCCc-ccHHHHHccCCCCC------CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKEVA------TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~~~------~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+||+|++.||. -||+||+.++.... ..+.+.+.++.+++.+|-...| .+||||||||+||||
T Consensus 75 ~~vFQ~~~LlPW~Tv~~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~P-----------~qLSGGMrQRVaiAR 143 (248)
T COG1116 75 GYVFQEDALLPWLTVLDNVALGLELRGKSKAEARERAKELLELVGLAGFEDKYP-----------HQLSGGMRQRVAIAR 143 (248)
T ss_pred EEEeccCcccchhhHHhhheehhhccccchHhHHHHHHHHHHHcCCcchhhcCc-----------cccChHHHHHHHHHH
Confidence 99999999998 79999999885421 1345667777777777655544 579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeC--CEE
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKN--GKV 1192 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~--G~I 1192 (1224)
||+.+|+|||||||.+|||+.|...+|+-+.+.. .++||++|||+.++.-. +|||+||.+ |+|
T Consensus 144 AL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i 211 (248)
T COG1116 144 ALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRI 211 (248)
T ss_pred HHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCcce
Confidence 9999999999999999999999999999998765 36899999999998765 999999999 555
No 139
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=2.2e-43 Score=386.61 Aligned_cols=219 Identities=49% Similarity=0.828 Sum_probs=199.1
Q ss_pred CcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHh
Q 047171 974 TKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLR 1053 (1224)
Q Consensus 974 ~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR 1053 (1224)
..+.|+++|++++|+++.+.++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+...+|
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 34679999999999753234699999999999999999999999999999999999999999999999999888878888
Q ss_pred cceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1054 SCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
++++|+||++.+|++|++||+.++....+.+++++..+...+.+++..+|.|+++.+.+...+||||||||++||||+++
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999998654444555666666677889999999999999999999999999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKV 1192 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~I 1192 (1224)
+|++|||||||++||+++.+.+.+.|+++.+++|+|+|||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999988777899999999999988999999999975
No 140
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-43 Score=390.20 Aligned_cols=213 Identities=32% Similarity=0.526 Sum_probs=182.5
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH---HHHhc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL---RKLRS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~---~~lR~ 1054 (1224)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (235)
T cd03261 1 IELRGLTKSFGG---RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRR 77 (235)
T ss_pred CeEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhc
Confidence 578999999963 469999999999999999999999999999999999999999999999999987764 56889
Q ss_pred ceEEEecCCCCCcc-cHHHHHccCCC---CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHH
Q 047171 1055 CIALVSQEPTLFAG-TIRQNIVYGKE---VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~g-TIreNl~~~~~---~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRla 1126 (1224)
+++||||++.+|.. |++||+.++.. ..+.++ +.++++..++ .........+||||||||++
T Consensus 78 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~ 146 (235)
T cd03261 78 RMGMLFQSGALFDSLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGL-----------RGAEDLYPAELSGGMKKRVA 146 (235)
T ss_pred ceEEEccCcccCCCCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCC-----------chhhcCChhhCCHHHHHHHH
Confidence 99999999999985 99999987521 123332 3333333333 33333445679999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
|||||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 226 (235)
T cd03261 147 LARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRA 226 (235)
T ss_pred HHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcC
Confidence 99999999999999999999999999999999998753 7899999999999876 99999999999999999999876
Q ss_pred c
Q 047171 1204 M 1204 (1224)
Q Consensus 1204 ~ 1204 (1224)
.
T Consensus 227 ~ 227 (235)
T cd03261 227 S 227 (235)
T ss_pred C
Confidence 4
No 141
>COG4615 PvdE ABC-type siderophore export system, fused ATPase and permease components [Secondary metabolites biosynthesis, transport, and catabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.2e-40 Score=357.74 Aligned_cols=444 Identities=21% Similarity=0.240 Sum_probs=336.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcCChhhhhccCCCCCHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHH
Q 047171 63 PEKGMCWTRTAERQASRIRMEYLKSVLRQEVGFFDNQTSSSSTFQVVTNITSDAHSIQDAVAEKIPNCLAHLTSFIGSIL 142 (1224)
Q Consensus 63 ~~~~~~~~~~~~~~~~~lR~~~~~~l~~~~~~~f~~~~~~~~~G~l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~ 142 (1224)
.+........++++.+++|.++.++++.-|+.-+++ .+++.++.++++|+..|. +-...++.+.++.+.++++.+
T Consensus 66 ~is~lg~t~~gq~~I~klr~~~~~kil~tplerier----~~~~rlla~L~~Dvr~IS-f~~s~lp~~~qa~il~l~s~a 140 (546)
T COG4615 66 LISQLGLTTLGQHFIYKLRSEFIKKILDTPLERIER----LGSARLLAGLTSDVRNIS-FAFSRLPELVQAIILTLGSAA 140 (546)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH----hcccchhhhhccccccee-ehHhhhHHHHHHHHHHHHHHH
Confidence 344556678899999999999999999999999998 489999999999999998 555667889999999999999
Q ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhcchHH--HHHHHHHHHHH
Q 047171 143 VAFLLSWRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSFVGEHQ--TLKRFSLALRK 220 (1224)
Q Consensus 143 ~~~~~~~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~~~e~~--~~~~~~~~~~~ 220 (1224)
++.++|+++.+++++++.+.++...+...+..+.....++..+++.+..+..++|-+..+......+ ..+.|....++
T Consensus 141 YLayLSp~mf~l~vV~ivv~~~~~~~~m~rv~k~~~aare~ed~Lq~~y~~il~G~KEL~l~r~R~~~~h~~~~~~~a~~ 220 (546)
T COG4615 141 YLAYLSPKMFLLTVVWIVVTIWGGFVLMARVYKHMAAARETEDKLQNDYQTILEGRKELTLNRERAEYVHNNLYIPDAQE 220 (546)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhcchhhheechHHHHHHHhhhcCcchHH
Confidence 9999999999999999999888888888999999999999999999999999999999887643222 22333333333
Q ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 047171 221 NMELGIKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMSALPNLSFISQATTAAT 299 (1224)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 299 (1224)
+++...+..........+. .+.+..+.+++|...... --+.....++.+.++++..|+.+....++.+.+|.+|++
T Consensus 221 ~r~~~~~~n~f~~la~~~~ni~l~~lIGlvf~lal~~~---w~st~~a~tivlvlLflr~pL~s~vgilP~l~~AqvA~~ 297 (546)
T COG4615 221 YRHHIIRANTFHLLAVNWSNIMLLGLIGLVFWLALSLG---WASTNVAATIVLVLLFLRTPLLSAVGILPTLLTAQVAFN 297 (546)
T ss_pred HHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---cchhhHHHHHHHHHHHHhhHHHHHHhhhhHHHHHHHHHH
Confidence 3331111111100111111 223333334444432221 112223344555566677899999999999999999999
Q ss_pred HHHHHhccCCCCCCCcccccccccccccEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC
Q 047171 300 RIFEMIDRVPVINSEDEIGKTLAYLRGEIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYD 368 (1224)
Q Consensus 300 ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~ 368 (1224)
||.++-..|+. .+.. .+...++. ..|+++||.|+|++. ..|+.|-|+|.|||||||++++|+|+|.
T Consensus 298 kiakle~~~~~-a~~~-~~q~~p~~-~~lelrnvrfay~~~~FhvgPiNl~ikrGelvFliG~NGsGKST~~~LLtGL~~ 374 (546)
T COG4615 298 KIAKLELAPYK-ADFP-RPQAFPDW-KTLELRNVRFAYQDNAFHVGPINLTIKRGELVFLIGGNGSGKSTLAMLLTGLYQ 374 (546)
T ss_pred HHHHhhcCCcc-ccCC-CCCcCCcc-cceeeeeeeeccCcccceecceeeEEecCcEEEEECCCCCcHHHHHHHHhcccC
Confidence 99987543332 2111 11222222 369999999999754 2466999999999999999999999999
Q ss_pred CCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCC-CCHHHHHHHHHHhcHHHHHHhccccccccc
Q 047171 369 PVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPG-ASMETVVKAAQAANVHDFIMKLNDGYETKV 447 (1224)
Q Consensus 369 ~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~-~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~ 447 (1224)
|++|+|++||.++..-++++.|+-++-|+-|.|||+.++ |.+. ++.+.+..-.+.-.+ .-.|.+
T Consensus 375 PqsG~I~ldg~pV~~e~ledYR~LfSavFsDyhLF~~ll------~~e~~as~q~i~~~LqrLel---------~~ktsl 439 (546)
T COG4615 375 PQSGEILLDGKPVSAEQLEDYRKLFSAVFSDYHLFDQLL------GPEGKASPQLIEKWLQRLEL---------AHKTSL 439 (546)
T ss_pred CCCCceeECCccCCCCCHHHHHHHHHHHhhhHhhhHhhh------CCccCCChHHHHHHHHHHHH---------hhhhcc
Confidence 999999999999999999999999999999999998754 3333 555544433322222 222222
Q ss_pred cCC---CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHH--cCCCeEEEEeCCcchhhccCEEE
Q 047171 448 GQF---GVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQA--SQGRTMIIIAHRLSTIRKADLIG 522 (1224)
Q Consensus 448 ~~~---g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~--~~~~t~i~i~H~l~~~~~ad~i~ 522 (1224)
..+ ...||-|||.|+|+--|++-+.||++|||=-+-=||.=++.+.+.+... .+|||++.|||+-.....|||++
T Consensus 440 ~d~~fs~~kLStGQkKRlAll~AllEeR~Ilv~DEWAADQDPaFRR~FY~~lLp~LK~qGKTI~aIsHDd~YF~~ADrll 519 (546)
T COG4615 440 NDGRFSNLKLSTGQKKRLALLLALLEERDILVLDEWAADQDPAFRREFYQVLLPLLKEQGKTIFAISHDDHYFIHADRLL 519 (546)
T ss_pred cCCcccccccccchHHHHHHHHHHHhhCCeEEeehhhccCChHHHHHHHHHHhHHHHHhCCeEEEEecCchhhhhHHHHH
Confidence 221 3579999999999999999999999999999999999998887766543 36999999999999999999999
Q ss_pred EEeCceEEee
Q 047171 523 VLQSGRVIES 532 (1224)
Q Consensus 523 vl~~G~i~~~ 532 (1224)
.|++|+++|.
T Consensus 520 ~~~~G~~~e~ 529 (546)
T COG4615 520 EMRNGQLSEL 529 (546)
T ss_pred HHhcCceeec
Confidence 9999999874
No 142
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=1.2e-43 Score=388.92 Aligned_cols=212 Identities=34% Similarity=0.580 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhccc-----CCCCceEEECCccCCCCC--HH
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFY-----DPQSGSVMVDERNIKSYN--LR 1050 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~-----~p~~G~I~idG~di~~~~--~~ 1050 (1224)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.++|.++.+.+ ..
T Consensus 1 i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~ 77 (227)
T cd03260 1 IELRDLNVYYGD---KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVL 77 (227)
T ss_pred CEEEEEEEEcCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHH
Confidence 578999999963 35999999999999999999999999999999999999 999999999999998776 56
Q ss_pred HHhcceEEEecCCCCCcccHHHHHccCCCC---CC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1051 KLRSCIALVSQEPTLFAGTIRQNIVYGKEV---AT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~---~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
.+|++++|+||++.+|..|++||+.++... .. ++++.++++..++.+.....++ +.+|||||||
T Consensus 78 ~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---------~~~LSgG~~q 148 (227)
T cd03260 78 ELRRRVGMVFQKPNPFPGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---------ALGLSGGQQQ 148 (227)
T ss_pred HHHhhEEEEecCchhccccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---------cccCCHHHHH
Confidence 788999999999999988999999875321 11 2334555555554433322110 4689999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
|++||||++++|++|||||||++||+++.+.+.+.|++..+.+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 rv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 149 RLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 999999999999999999999999999999999999988655899999999999865 999999999999999998764
No 143
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.4e-44 Score=351.22 Aligned_cols=208 Identities=27% Similarity=0.467 Sum_probs=185.7
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH---Hhc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK---LRS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~---lR~ 1054 (1224)
|+|+||+.+|+.. +++|+||||+|++||.+=++|||||||||++++|++...|++|+|.++|.|+..+.-++ ||+
T Consensus 2 I~f~~V~k~Y~~g--~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR 79 (223)
T COG2884 2 IRFENVSKAYPGG--REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRR 79 (223)
T ss_pred eeehhhhhhcCCC--chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhh
Confidence 7999999999854 67999999999999999999999999999999999999999999999999998887555 899
Q ss_pred ceEEEecCCCCC-cccHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1055 CIALVSQEPTLF-AGTIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF-~gTIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
+||+|+||..|. +-|+.||+.+... ... .+++.++++.+++.+-...+|. +|||||+||+||
T Consensus 80 ~IGvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~lP~-----------~LSGGEQQRvaI 148 (223)
T COG2884 80 QIGVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARALPS-----------QLSGGEQQRVAI 148 (223)
T ss_pred eeeeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhcCcc-----------ccCchHHHHHHH
Confidence 999999999876 4699999998642 112 3567788899998888887774 699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQ 1198 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~ 1198 (1224)
|||++.+|++||-||||-+||+++...|++.+++.- .|.||++.||+.+.+.. --|++.+++|+++....+
T Consensus 149 ARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~~ 221 (223)
T COG2884 149 ARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDESR 221 (223)
T ss_pred HHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEecccc
Confidence 999999999999999999999999999999998864 58999999999999988 567999999999876543
No 144
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=8.6e-43 Score=376.34 Aligned_cols=206 Identities=38% Similarity=0.621 Sum_probs=184.2
Q ss_pred CCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHH
Q 047171 973 PTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKL 1052 (1224)
Q Consensus 973 ~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~l 1052 (1224)
|..+.|+++|++++|+.. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+
T Consensus 2 ~~~~~l~~~~l~~~~~~~-~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~ 80 (207)
T cd03369 2 PEHGEIEVENLSVRYAPD-LPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDL 80 (207)
T ss_pred CCCCeEEEEEEEEEeCCC-CcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHH
Confidence 344679999999999642 2469999999999999999999999999999999999999999999999999988888889
Q ss_pred hcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1053 RSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1053 R~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
|++++||||+|.+|++|++||+.+... .+++++.++++ +.+....|||||+||++||||++
T Consensus 81 ~~~i~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~ 141 (207)
T cd03369 81 RSSLTIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALL 141 (207)
T ss_pred HhhEEEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHh
Confidence 999999999999999999999987642 34444444332 24567789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecCh
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQ 1198 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~ 1198 (1224)
++|++|||||||++||+++.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|++
T Consensus 142 ~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~~ 207 (207)
T cd03369 142 KRPRVLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDHP 207 (207)
T ss_pred hCCCEEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCCC
Confidence 999999999999999999999999999988778999999999999988999999999999998874
No 145
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=6.6e-43 Score=366.87 Aligned_cols=207 Identities=34% Similarity=0.502 Sum_probs=172.4
Q ss_pred EEEEEEEEECCCCCC-ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH---H-
Q 047171 978 IELKNVFFSYPSRPD-QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK---L- 1052 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~---l- 1052 (1224)
++++||+..|..... ..+|+++||+|++||.|||+||||||||||+++|.++-.|++|.|.++|.|+..++.+. +
T Consensus 2 i~~~~v~k~y~~~~~~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R 81 (226)
T COG1136 2 IELKNVSKIYGLGGEKVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLR 81 (226)
T ss_pred cEEeeeEEEeccCCcceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHH
Confidence 679999999964322 46899999999999999999999999999999999999999999999999999998543 3
Q ss_pred hcceEEEecCCCCCc-ccHHHHHccCC--CCCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1053 RSCIALVSQEPTLFA-GTIRQNIVYGK--EVAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1053 R~~i~~V~Qdp~LF~-gTIreNl~~~~--~~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
|++||||+|+..|++ .|++||+.+.. .... ++...+.++..++.+... ...+.+||||||||+
T Consensus 82 ~~~iGfvFQ~~nLl~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~----------~~~p~eLSGGqqQRV 151 (226)
T COG1136 82 RKKIGFVFQNFNLLPDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLL----------KKKPSELSGGQQQRV 151 (226)
T ss_pred HHhEEEECccCCCCCCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhc----------cCCchhcCHHHHHHH
Confidence 667999999999875 69999998531 1111 223333333334433221 144568999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEE
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQKADNIVVIKNGKVVE 1194 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive 1194 (1224)
||||||+.+|+|++.||||.+||.+|.+.|.+.+.+.. .|+|+|+|||+......|||++.|.||++.+
T Consensus 152 AIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 152 AIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred HHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999999999999999999999999885 3789999999999999999999999999543
No 146
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7e-43 Score=387.17 Aligned_cols=218 Identities=29% Similarity=0.465 Sum_probs=189.4
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC---CCCceEEECCccCCCCCHHHHh
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD---PQSGSVMVDERNIKSYNLRKLR 1053 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~~~~lR 1053 (1224)
.|+++|+++.|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++ |++|+|.+||.++.+.+...+|
T Consensus 2 ~~~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~ 78 (246)
T PRK14269 2 IAKTTNLNLFYGK---KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALR 78 (246)
T ss_pred ceeeeeeEEEECC---EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHh
Confidence 3789999999963 469999999999999999999999999999999999985 6899999999999988888889
Q ss_pred cceEEEecCCCCCcccHHHHHccCCC--C------CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1054 SCIALVSQEPTLFAGTIRQNIVYGKE--V------ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~gTIreNl~~~~~--~------~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
++++|+||+|.+|..|++||+.++.. . ..++++.++++..++.+++. ....+.+.+||||||||+
T Consensus 79 ~~i~~~~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G~~qrv 151 (246)
T PRK14269 79 KNVGMVFQQPNVFVKSIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVK-------DKLKQNALALSGGQQQRL 151 (246)
T ss_pred hhEEEEecCCccccccHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhh-------HHhcCCcccCCHHHHHHH
Confidence 99999999999999999999987521 0 11223455555555544332 234556778999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
+||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 152 CIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999999999999999999988778999999999998865 999999999999999999999864
No 147
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.1e-43 Score=393.71 Aligned_cols=217 Identities=30% Similarity=0.533 Sum_probs=188.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|+.....++|+|+||+|++||.+||+|+||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13650 4 IIEVKNLTFKYKEDQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKI 83 (279)
T ss_pred eEEEEeEEEEcCCCCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhc
Confidence 48999999999642224599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEecCC--CCCcccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEP--TLFAGTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp--~LF~gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+||+|+| .++..|++|||.++.. ..+. +.+.++++..++.++.. ....+||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LSgGq~qrv~lA 152 (279)
T PRK13650 84 GMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKE-----------REPARLSGGQKQRVAIA 152 (279)
T ss_pred eEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 3667899999987632 1232 34555566656554433 34468999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|||+++|++|||||||++||+.+.+.+.+.|+++.+ |+|+|+|||+++.+..||+|++|++|++++.|+++++...
T Consensus 153 ral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 153 GAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 999999999999999999999999999999998753 7999999999999988999999999999999999998764
No 148
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-43 Score=394.82 Aligned_cols=217 Identities=32% Similarity=0.531 Sum_probs=193.2
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+.+|. +..+++|+||+|++||.++++|||||||||++++|.||..|++|+|.+||.|+..++++ ++.|
T Consensus 5 ~l~i~~v~k~yg---~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~i 79 (352)
T COG3842 5 ALEIRNVSKSFG---DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPI 79 (352)
T ss_pred eEEEEeeeeecC---CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccc
Confidence 699999999996 45799999999999999999999999999999999999999999999999999998876 5899
Q ss_pred EEEecCCCCCc-ccHHHHHccCCC---CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKE---VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~---~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
++|+|+..||. .||+|||.||.. ...+ +.+.++++.+++.++-.+.| .+|||||+||+|||
T Consensus 80 g~VFQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~p-----------~qLSGGQqQRVALA 148 (352)
T COG3842 80 GMVFQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRKP-----------HQLSGGQQQRVALA 148 (352)
T ss_pred ceeecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhCh-----------hhhChHHHHHHHHH
Confidence 99999999996 799999999964 1222 36778888888877655444 57999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhh-hhcCEEEEEeCCEEEEecChhHHhhcC
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTI-QKADNIVVIKNGKVVEQGTQSSLLSMG 1205 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti-~~aD~I~vl~~G~Ive~Gt~~eLl~~~ 1205 (1224)
|||..+|++||||||-|+||.+-...++.-+++.. .|.|.|+|||+-++. ..+|||+||++|+|...|||+|+...
T Consensus 149 RAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~- 227 (352)
T COG3842 149 RALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYER- 227 (352)
T ss_pred HHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhC-
Confidence 99999999999999999999999999999888764 388999999999875 55999999999999999999999987
Q ss_pred CCchh
Q 047171 1206 NGGAY 1210 (1224)
Q Consensus 1206 ~~g~y 1210 (1224)
+...|
T Consensus 228 P~~~f 232 (352)
T COG3842 228 PATRF 232 (352)
T ss_pred cchHH
Confidence 44444
No 149
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-42 Score=396.81 Aligned_cols=210 Identities=30% Similarity=0.488 Sum_probs=181.8
Q ss_pred cccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCC--CC
Q 047171 325 RGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKK--LQ 385 (1224)
Q Consensus 325 ~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~ 385 (1224)
.+.|+++|++|+|++. ++|+++||+|+||||||||+++|+|+++ |++|+|.+||+++.. .+
T Consensus 78 ~~~i~~~nls~~y~~~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~ 157 (329)
T PRK14257 78 ANVFEIRNFNFWYMNRTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKIS 157 (329)
T ss_pred CceEEEEeeEEEecCCCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 4679999999999632 2567999999999999999999999997 579999999999973 45
Q ss_pred HHHHhcccEEecCCCCCCcccHHHHHhcCCC--CCCHHHH-----HHHHHHhcHHHHHHhccccccccccCCCCCCChHH
Q 047171 386 LKWLRSQMGLVNQEPILFSTSIKENILIGKP--GASMETV-----VKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQ 458 (1224)
Q Consensus 386 ~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~~~~~~-----~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq 458 (1224)
...+|+.++||||+|++|++|++|||.|+.. ..++++. .++++.++ ++.++++.++++|.+|||||
T Consensus 158 ~~~lr~~i~~v~q~~~~~~~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~-------L~~~l~~~~~~~~~~LSgGq 230 (329)
T PRK14257 158 SLELRTRIGMVFQKPTPFEMSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAA-------LWDEVKDDLDKAGNALSGGQ 230 (329)
T ss_pred hHhhhccEEEEecCCccCCCcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcC-------CcchhhhhhhCCcccCCHHH
Confidence 5678999999999999999999999998742 1233333 22333332 34456788999999999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHH
Q 047171 459 KQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDV 537 (1224)
Q Consensus 459 ~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~ 537 (1224)
||||+||||++++|+|||||||||+||+++...+++.|+++.+++|+|+|||+++++.. ||+|+||++|+|++.|++++
T Consensus 231 kqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~~~Tii~iTH~l~~i~~~~Driivl~~G~i~e~g~~~~ 310 (329)
T PRK14257 231 QQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKKKYSIIIVTHSMAQAQRISDETVFFYQGWIEEAGETKT 310 (329)
T ss_pred HHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988888999999999999987 99999999999999999999
Q ss_pred HHhh
Q 047171 538 LMQM 541 (1224)
Q Consensus 538 l~~~ 541 (1224)
+...
T Consensus 311 l~~~ 314 (329)
T PRK14257 311 IFIH 314 (329)
T ss_pred HhcC
Confidence 9865
No 150
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-42 Score=399.79 Aligned_cols=213 Identities=27% Similarity=0.461 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|+. +.++|+|+||+|++||.++|+||||||||||+++|+|+.+|++|+|.+||.++.++++. +++|
T Consensus 3 ~l~i~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 78 (356)
T PRK11650 3 GLKLQAVRKSYDG--KTQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDI 78 (356)
T ss_pred EEEEEeEEEEeCC--CCEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999942 34699999999999999999999999999999999999999999999999999887764 4789
Q ss_pred EEEecCCCCCc-ccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+||||++.+|. .|++|||.++.. ..+. +++.++++..++.++..+ ...+||||||||++|||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~-----------~~~~LSgGq~QRvalAR 147 (356)
T PRK11650 79 AMVFQNYALYPHMSVRENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDR-----------KPRELSGGQRQRVAMGR 147 (356)
T ss_pred EEEeCCccccCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhC-----------ChhhCCHHHHHHHHHHH
Confidence 99999999996 699999998743 1222 345566666666555443 34579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||+++|++||||||||+||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++..+
T Consensus 148 AL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 148 AIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 99999999999999999999999999999988754 7899999999998765 999999999999999999999876
No 151
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-42 Score=392.03 Aligned_cols=217 Identities=32% Similarity=0.567 Sum_probs=184.2
Q ss_pred EEEEEEEEECCCCC--CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC--HHHHh
Q 047171 978 IELKNVFFSYPSRP--DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN--LRKLR 1053 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~--~~~lR 1053 (1224)
|+++||+++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+ ...+|
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 82 (287)
T PRK13637 3 IKIENLTHIYMEGTPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIR 82 (287)
T ss_pred EEEEEEEEECCCCCccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHh
Confidence 78999999997421 146999999999999999999999999999999999999999999999999998754 45788
Q ss_pred cceEEEecCC--CCCcccHHHHHccCCC--CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1054 SCIALVSQEP--TLFAGTIRQNIVYGKE--VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1054 ~~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
++++||||+| .+|+.|++|||.++.. ..+.++ +.++++.+++. +.+.......+||||||||+
T Consensus 83 ~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~---------~~~~~~~~~~~LSgGq~qrv 153 (287)
T PRK13637 83 KKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLD---------YEDYKDKSPFELSGGQKRRV 153 (287)
T ss_pred hceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCC---------chhhccCCcccCCHHHHHHH
Confidence 9999999998 5788999999987532 233333 33333333331 01334556678999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChhHHh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQ-KADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+ ++|+|+|||+++.+. .||||++|++|+++++|++++++
T Consensus 154 ~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13637 154 AIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVF 233 (287)
T ss_pred HHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHH
Confidence 999999999999999999999999999999999998753 789999999999985 49999999999999999999986
Q ss_pred h
Q 047171 1203 S 1203 (1224)
Q Consensus 1203 ~ 1203 (1224)
+
T Consensus 234 ~ 234 (287)
T PRK13637 234 K 234 (287)
T ss_pred h
Confidence 5
No 152
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-42 Score=398.93 Aligned_cols=212 Identities=30% Similarity=0.510 Sum_probs=185.5
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.++ .++++
T Consensus 6 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~--~~r~i 80 (351)
T PRK11432 6 FVVLKNITKRFGS---NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSI--QQRDI 80 (351)
T ss_pred EEEEEeEEEEECC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCH--HHCCE
Confidence 5999999999963 458999999999999999999999999999999999999999999999999987665 36889
Q ss_pred EEEecCCCCCc-ccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+||+|++.+|. .|++|||.|+.. ..+. +++.++++..++.++. ......||||||||+||||
T Consensus 81 g~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~-----------~r~~~~LSgGq~QRVaLAR 149 (351)
T PRK11432 81 CMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFE-----------DRYVDQISGGQQQRVALAR 149 (351)
T ss_pred EEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHH
Confidence 99999999996 599999998742 1222 3445555555554433 3445689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||+++|++||||||||+||+.+.+.+++.|+++.+ ++|+|+|||+++.+.. ||+|+||++|+|++.|+++++...
T Consensus 150 aL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 150 ALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred HHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999998764 7899999999999855 999999999999999999999876
No 153
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=1.5e-42 Score=382.90 Aligned_cols=222 Identities=26% Similarity=0.483 Sum_probs=185.7
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHH-hcce
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKL-RSCI 1056 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~l-R~~i 1056 (1224)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (236)
T cd03219 1 LEVRGLTKRFGG---LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGI 77 (236)
T ss_pred CeeeeeEEEECC---EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCE
Confidence 478999999963 459999999999999999999999999999999999999999999999999988876654 6789
Q ss_pred EEEecCCCCCcc-cHHHHHccCCCCCCHHHH-------HHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEPTLFAG-TIRQNIVYGKEVATEAEI-------RKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp~LF~g-TIreNl~~~~~~~~deei-------~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+|+||++.+|.+ |++||+.++........+ ........+.+.+..+ |++........+||||||||++||
T Consensus 78 ~~v~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 155 (236)
T cd03219 78 GRTFQIPRLFPELTVLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIA 155 (236)
T ss_pred EEEecccccccCCCHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHH
Confidence 999999999986 999999875321100000 0000111233444443 565556677788999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||++++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 156 ~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (236)
T cd03219 156 RALATDPKLLLLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRNN 233 (236)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhccC
Confidence 99999999999999999999999999999998875 68899999999999866 999999999999999999998753
No 154
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=1.2e-42 Score=399.53 Aligned_cols=211 Identities=33% Similarity=0.481 Sum_probs=180.8
Q ss_pred ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHH----hcceEEEecCCCCCc-
Q 047171 993 QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKL----RSCIALVSQEPTLFA- 1067 (1224)
Q Consensus 993 ~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~l----R~~i~~V~Qdp~LF~- 1067 (1224)
.++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++...+...+ |++++||||++.+|+
T Consensus 6 ~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l~~~ 85 (363)
T TIGR01186 6 KKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFALFPH 85 (363)
T ss_pred ceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcCCCC
Confidence 458999999999999999999999999999999999999999999999999999998887 889999999999997
Q ss_pred ccHHHHHccCCCC--CC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 047171 1068 GTIRQNIVYGKEV--AT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLD 1141 (1224)
Q Consensus 1068 gTIreNl~~~~~~--~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLD 1141 (1224)
.||+|||.++... .+ ++++.++++.+++.++ ....+.+||||||||++|||||+++|+|||||
T Consensus 86 ~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~-----------~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlD 154 (363)
T TIGR01186 86 MTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEY-----------EHRYPDELSGGMQQRVGLARALAAEPDILLMD 154 (363)
T ss_pred CCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchh-----------hhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 5999999876321 12 2344555555555443 44555689999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchhHHHH
Q 047171 1142 EATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLI 1214 (1224)
Q Consensus 1142 EaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~ 1214 (1224)
||||+||+.+.+.+++.+.++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++.+..+.++..++
T Consensus 155 EP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~p~~~~~~~~~ 230 (363)
T TIGR01186 155 EAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRNPANEYVEEFI 230 (363)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhCcccHHHHHHh
Confidence 9999999999999999998874 37999999999998754 9999999999999999999998763233333443
No 155
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-42 Score=399.18 Aligned_cols=231 Identities=35% Similarity=0.527 Sum_probs=188.8
Q ss_pred EEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH---Hh
Q 047171 978 IELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK---LR 1053 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~---lR 1053 (1224)
|+++||+++|+... +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++..++... +|
T Consensus 2 i~i~~l~~~y~~~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 81 (343)
T PRK11153 2 IELKNISKVFPQGGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKAR 81 (343)
T ss_pred EEEEeEEEEeCCCCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHh
Confidence 78999999997321 356999999999999999999999999999999999999999999999999998877654 57
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
++|+||||++.+|. .|++||+.++.. ..+.++..+ .+.+.+..+ |++........+||||||||++||||
T Consensus 82 ~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAra 154 (343)
T PRK11153 82 RQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKA-----RVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARA 154 (343)
T ss_pred cCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHH
Confidence 89999999999886 799999987532 123322211 112222222 33333445567899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNG 1207 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~ 1207 (1224)
|+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|++++++....+
T Consensus 155 L~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~~~~ 234 (343)
T PRK11153 155 LASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSHPKH 234 (343)
T ss_pred HHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhCCCc
Confidence 9999999999999999999999999999998753 7899999999999876 999999999999999999999865222
Q ss_pred chhHHHHH
Q 047171 1208 GAYYSLIK 1215 (1224)
Q Consensus 1208 g~y~~l~~ 1215 (1224)
.....++.
T Consensus 235 ~~~~~~~~ 242 (343)
T PRK11153 235 PLTREFIQ 242 (343)
T ss_pred HHHHHHHh
Confidence 33344443
No 156
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-42 Score=384.48 Aligned_cols=218 Identities=29% Similarity=0.481 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~~ 1049 (1224)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 83 (254)
T PRK14273 7 IIETENLNLFYTD---FKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDI 83 (254)
T ss_pred eEEEeeeEEEeCC---ceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccH
Confidence 5999999999963 3599999999999999999999999999999999999997 48999999998853 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCCC---CC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKEV---AT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~---~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||++.+|+.|++|||.++... .+ ++.+.++++.+++.+.+ ++.+++ .+.+||||||
T Consensus 84 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l---~~~~~~----~~~~LSgG~~ 156 (254)
T PRK14273 84 LELRRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEV---KDKLNT----NALSLSGGQQ 156 (254)
T ss_pred HHHhhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhh---HHHHhC----CcccCCHHHH
Confidence 6788999999999999999999999875311 11 23445555555543322 233444 5568999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 157 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 236 (254)
T PRK14273 157 QRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDEL 236 (254)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999998778899999999999865 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
.+.
T Consensus 237 ~~~ 239 (254)
T PRK14273 237 FFN 239 (254)
T ss_pred HhC
Confidence 875
No 157
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-42 Score=380.37 Aligned_cols=224 Identities=33% Similarity=0.560 Sum_probs=189.9
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+...+|+.+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i 79 (241)
T PRK14250 3 EIEFKEVSYSSFG---KEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKI 79 (241)
T ss_pred eEEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcE
Confidence 4899999999963 3599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEecCCCCCcccHHHHHccCCCCC--CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1057 ALVSQEPTLFAGTIRQNIVYGKEVA--TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1057 ~~V~Qdp~LF~gTIreNl~~~~~~~--~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
+|+||++.+|+.|++||+.++.... .++++.+.++..++. +........+||||||||++||||++++
T Consensus 80 ~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~LS~G~~qrl~la~al~~~ 149 (241)
T PRK14250 80 GMVFQQPHLFEGTVKDNIEYGPMLKGEKNVDVEYYLSIVGLN----------KEYATRDVKNLSGGEAQRVSIARTLANN 149 (241)
T ss_pred EEEecCchhchhhHHHHHhcchhhcCcHHHHHHHHHHHcCCC----------HHHhhCCcccCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999998753211 123333333333331 0123455678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchhH
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAYY 1211 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~ 1211 (1224)
|++|||||||++||+.+.+.+.+.|++.. .++|+|++||+++.+.. ||+|++|++|++++.|++++++.. +...|.
T Consensus 150 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-~~~~~~ 228 (241)
T PRK14250 150 PEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN-PQNEVT 228 (241)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC-CCcHHH
Confidence 99999999999999999999999999875 37999999999999876 999999999999999999999864 233454
Q ss_pred HHH
Q 047171 1212 SLI 1214 (1224)
Q Consensus 1212 ~l~ 1214 (1224)
+.+
T Consensus 229 ~~~ 231 (241)
T PRK14250 229 KLF 231 (241)
T ss_pred HHH
Confidence 443
No 158
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-42 Score=388.35 Aligned_cols=212 Identities=32% Similarity=0.552 Sum_probs=184.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|+. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~--~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 81 (274)
T PRK13647 4 IIEVEDLHFRYKD--GTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKV 81 (274)
T ss_pred eEEEEEEEEEeCC--CCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhE
Confidence 4899999999963 24599999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEecCC--CCCcccHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEP--TLFAGTIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp--~LF~gTIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+||||+| .+|..|++||+.++.. ..+ ++++.++++..++.++..+ ....||||||||++||
T Consensus 82 ~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~-----------~~~~LSgG~~qrv~la 150 (274)
T PRK13647 82 GLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDK-----------PPYHLSYGQKKRVAIA 150 (274)
T ss_pred EEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcC-----------ChhhCCHHHHHHHHHH
Confidence 9999998 6888999999987632 122 2345555666665544333 3347999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
|||+++|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 151 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 151 GVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred HHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 99999999999999999999999999999998875 47899999999999854 999999999999999998765
No 159
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-42 Score=384.93 Aligned_cols=218 Identities=28% Similarity=0.474 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1049 (1224)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.+||.++.. .+.
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (253)
T PRK14242 6 KMEARGLSFFYGD---FQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDV 82 (253)
T ss_pred EEEEeeeEEEECC---eeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCH
Confidence 5999999999963 359999999999999999999999999999999999975 589999999999865 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC--CC-----CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VA-----TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~-----~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||++.+|..|++||+.++.. .. .++++.++++..++.+.+. ........+||||||
T Consensus 83 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq~ 155 (253)
T PRK14242 83 VELRRRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVK-------DRLHESALGLSGGQQ 155 (253)
T ss_pred HHHhhcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCHHHH
Confidence 678899999999999999999999987521 11 1234555555555543322 234456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14242 156 QRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778899999999999865 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
...
T Consensus 236 ~~~ 238 (253)
T PRK14242 236 FTR 238 (253)
T ss_pred HcC
Confidence 865
No 160
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=5.2e-42 Score=378.55 Aligned_cols=218 Identities=50% Similarity=0.830 Sum_probs=197.7
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIK 408 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~ 408 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|++|++++|+.|+.
T Consensus 17 ~l~~isl~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~ 93 (237)
T cd03252 17 ILDNISLRIK---PGEVVGIVGRSGSGKSTLTKLIQRFYVPENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFNRSIR 93 (237)
T ss_pred ceeceEEEEc---CCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhccchHH
Confidence 4666666653 5679999999999999999999999999999999999999888888888899999999999999999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHH
Q 047171 409 ENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAES 488 (1224)
Q Consensus 409 ~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~ 488 (1224)
||+.++.+....+++.+.++..++++++..+|.|+++..+.++.+||||||||++||||++.+|++|||||||++||+.+
T Consensus 94 ~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~ 173 (237)
T cd03252 94 DNIALADPGMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYES 173 (237)
T ss_pred HHhhccCCCCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHH
Confidence 99998765445566777777788899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHHHHH
Q 047171 489 ERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMV 553 (1224)
Q Consensus 489 ~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~ 553 (1224)
...+.+.|.++.+|+|+|++||+++.+..||+|++|++|++++.|+++++++. .+.|..++
T Consensus 174 ~~~l~~~l~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~----~~~~~~~~ 234 (237)
T cd03252 174 EHAIMRNMHDICAGRTVIIIAHRLSTVKNADRIIVMEKGRIVEQGSHDELLAE----NGLYAYLY 234 (237)
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCHHHHHhCCEEEEEECCEEEEEcCHHHHHhc----cChHHHHH
Confidence 99999999988778999999999999988999999999999999999999876 56776655
No 161
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=2.9e-42 Score=382.74 Aligned_cols=217 Identities=30% Similarity=0.490 Sum_probs=185.4
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC-----CceEEECCccCCCC--CHH
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ-----SGSVMVDERNIKSY--NLR 1050 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~~--~~~ 1050 (1224)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++... +..
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~ 78 (247)
T TIGR00972 2 IEIENLNLFYGE---KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVV 78 (247)
T ss_pred EEEEEEEEEECC---eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchH
Confidence 789999999963 35899999999999999999999999999999999999998 99999999998763 456
Q ss_pred HHhcceEEEecCCCCCcccHHHHHccCCC--C-CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1051 KLRSCIALVSQEPTLFAGTIRQNIVYGKE--V-ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~-~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
.+|++++|+||++.+|..|++||+.++.. . .+. +++.++++..++.+++. ........+|||||||
T Consensus 79 ~~~~~i~~v~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~q 151 (247)
T TIGR00972 79 ELRRRVGMVFQKPNPFPMSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVK-------DRLHDSALGLSGGQQQ 151 (247)
T ss_pred HHHhheEEEecCcccCCCCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchh-------hHhhCCcccCCHHHHH
Confidence 67899999999999999999999986421 1 122 23444555555432221 2334556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
|++|||||+++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 152 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 152 RLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred HHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999865 9999999999999999999998
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
..
T Consensus 232 ~~ 233 (247)
T TIGR00972 232 TN 233 (247)
T ss_pred hC
Confidence 64
No 162
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.4e-42 Score=383.11 Aligned_cols=220 Identities=29% Similarity=0.490 Sum_probs=188.5
Q ss_pred cccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCC--C
Q 047171 975 KGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKS--Y 1047 (1224)
Q Consensus 975 ~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~ 1047 (1224)
.+.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++ |++|+|.+||.++.. .
T Consensus 11 ~~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~ 87 (260)
T PRK10744 11 PSKIQVRNLNFYYGK---FHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQ 87 (260)
T ss_pred CceEEEEEEEEEeCC---eEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEcccccc
Confidence 357999999999963 369999999999999999999999999999999999986 479999999999853 4
Q ss_pred CHHHHhcceEEEecCCCCCcccHHHHHccCCC---CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1048 NLRKLRSCIALVSQEPTLFAGTIRQNIVYGKE---VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1048 ~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~---~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
+...+|++++|+||++.+|+.|++||+.++.. ..+. ++++++++..++.+.+ .....+...+||||
T Consensus 88 ~~~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 160 (260)
T PRK10744 88 DIALLRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEV-------KDKLHQSGYSLSGG 160 (260)
T ss_pred chHHHhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhh-------HHHHhcCCCCCCHH
Confidence 56678999999999999999999999987532 1222 3445555555543222 23345667789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChh
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQS 1199 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~ 1199 (1224)
||||++||||++++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 161 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 240 (260)
T PRK10744 161 QQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTD 240 (260)
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988778899999999999865 9999999999999999999
Q ss_pred HHhhc
Q 047171 1200 SLLSM 1204 (1224)
Q Consensus 1200 eLl~~ 1204 (1224)
++...
T Consensus 241 ~~~~~ 245 (260)
T PRK10744 241 TIFTK 245 (260)
T ss_pred HHHhC
Confidence 99864
No 163
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=2.5e-42 Score=398.11 Aligned_cols=217 Identities=29% Similarity=0.455 Sum_probs=186.4
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+.+|++|+|.+||.++.+.++. ++.+
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~i 78 (353)
T TIGR03265 4 YLSIDNIRKRFGA---FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDY 78 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 4899999999963 4589999999999999999999999999999999999999999999999999877664 6789
Q ss_pred EEEecCCCCCc-ccHHHHHccCCCC--CCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKEV--ATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~~--~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+||+|++.+|. .|++|||.|+... .+.+ .+.++++.. |++......+.+||||||||+||||
T Consensus 79 g~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l-----------~L~~~~~~~~~~LSgGq~QRvaLAR 147 (353)
T TIGR03265 79 GIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLV-----------GLPGSERKYPGQLSGGQQQRVALAR 147 (353)
T ss_pred EEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCCchhhCChhhCCHHHHHHHHHHH
Confidence 99999999996 7999999987421 2222 233333333 3444445666789999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCC
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGN 1206 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~ 1206 (1224)
||+++|++||||||||+||+.+.+.+++.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++... +
T Consensus 148 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~-p 226 (353)
T TIGR03265 148 ALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH-P 226 (353)
T ss_pred HHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC-C
Confidence 99999999999999999999999999999988754 7899999999999755 999999999999999999999976 3
Q ss_pred Cchh
Q 047171 1207 GGAY 1210 (1224)
Q Consensus 1207 ~g~y 1210 (1224)
...|
T Consensus 227 ~~~~ 230 (353)
T TIGR03265 227 ATPF 230 (353)
T ss_pred CCHH
Confidence 4333
No 164
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-42 Score=388.41 Aligned_cols=220 Identities=32% Similarity=0.555 Sum_probs=186.6
Q ss_pred EEEEEEEEECCCCC--CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCC----CHHH
Q 047171 978 IELKNVFFSYPSRP--DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSY----NLRK 1051 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~~~~ 1051 (1224)
|+++||+++|++.+ ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (286)
T PRK13646 3 IRFDNVSYTYQKGTPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRP 82 (286)
T ss_pred EEEEEEEEEECCCCccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996432 24699999999999999999999999999999999999999999999999998653 3467
Q ss_pred HhcceEEEecCC--CCCcccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhccccccc-ccCCCCCCCChHHHHHHH
Q 047171 1052 LRSCIALVSQEP--TLFAGTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDT-YCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1052 lR~~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSGGQrQRla 1126 (1224)
+|++|+||||+| .+|..|++|||.++.. ..+.++..+. +.+.+..+ |+++ .....+.+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (286)
T PRK13646 83 VRKRIGMVFQFPESQLFEDTVEREIIFGPKNFKMNLDEVKNY-----AHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIA 155 (286)
T ss_pred HHhheEEEecChHhccchhhHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 899999999998 5888999999987632 2233333321 22333333 6653 345677899999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChhHHhh
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQ-KADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~-~aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
|||||+.+|+||||||||++||+.+...+.+.|+++. .++|+|+|||+++.+. .||+|++|++|++++.|+++++.+
T Consensus 156 laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 235 (286)
T PRK13646 156 IVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFK 235 (286)
T ss_pred HHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 9999999999999999999999999999999999875 4799999999999985 499999999999999999999876
Q ss_pred c
Q 047171 1204 M 1204 (1224)
Q Consensus 1204 ~ 1204 (1224)
.
T Consensus 236 ~ 236 (286)
T PRK13646 236 D 236 (286)
T ss_pred C
Confidence 4
No 165
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-42 Score=379.16 Aligned_cols=211 Identities=32% Similarity=0.492 Sum_probs=180.0
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .+++++
T Consensus 3 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 77 (239)
T cd03296 3 IEVRNVSKRFGD---FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVG 77 (239)
T ss_pred EEEEeEEEEECC---EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceE
Confidence 789999999963 469999999999999999999999999999999999999999999999999876543 367899
Q ss_pred EEecCCCCCc-ccHHHHHccCCCCC------CH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHH
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKEVA------TE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~~~------~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRla 1126 (1224)
||||+|.+|. .|++||+.++.... +. +++.++++..+ ++........+||||||||++
T Consensus 78 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrl~ 146 (239)
T cd03296 78 FVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQ-----------LDWLADRYPAQLSGGQRQRVA 146 (239)
T ss_pred EEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcC-----------ChhhhhcChhhCCHHHHHHHH
Confidence 9999999886 69999998753211 11 12333333333 333344455689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
|||||+++|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (239)
T cd03296 147 LARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYD 226 (239)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999998765 99999999999999999999976
Q ss_pred c
Q 047171 1204 M 1204 (1224)
Q Consensus 1204 ~ 1204 (1224)
.
T Consensus 227 ~ 227 (239)
T cd03296 227 H 227 (239)
T ss_pred C
Confidence 4
No 166
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=4e-42 Score=399.74 Aligned_cols=214 Identities=28% Similarity=0.512 Sum_probs=190.2
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|+ +.++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.++|.++.+++...+|+++
T Consensus 3 ~L~~~nls~~y~---~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~i 79 (402)
T PRK09536 3 MIDVSDLSVEFG---DTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRV 79 (402)
T ss_pred eEEEeeEEEEEC---CEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcce
Confidence 489999999996 34699999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCC-CcccHHHHHccCCCC----------CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1057 ALVSQEPTL-FAGTIRQNIVYGKEV----------ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1057 ~~V~Qdp~L-F~gTIreNl~~~~~~----------~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
+||||++.+ |+.|++||+.+++.. .+++.++++++.+++.++.. ....+||||||||+
T Consensus 80 g~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~-----------~~~~~LSgGerQRv 148 (402)
T PRK09536 80 ASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFAD-----------RPVTSLSGGERQRV 148 (402)
T ss_pred EEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhc-----------CChhhCCHHHHHHH
Confidence 999999987 678999999876421 12345667777777655432 33457999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
+|||||+++|+||||||||++||+.+...+++.|+++. +++|+|+++|+++.+.. ||||++|++|++++.|+++|++.
T Consensus 149 ~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~ 228 (402)
T PRK09536 149 LLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLT 228 (402)
T ss_pred HHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhC
Confidence 99999999999999999999999999999999999876 57899999999999955 99999999999999999999876
Q ss_pred c
Q 047171 1204 M 1204 (1224)
Q Consensus 1204 ~ 1204 (1224)
.
T Consensus 229 ~ 229 (402)
T PRK09536 229 A 229 (402)
T ss_pred c
Confidence 3
No 167
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-42 Score=381.52 Aligned_cols=212 Identities=34% Similarity=0.548 Sum_probs=181.4
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC---HHHHhc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN---LRKLRS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~---~~~lR~ 1054 (1224)
++++||+++|++ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|+
T Consensus 1 l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (241)
T cd03256 1 IEVENLSKTYPN--GKKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRR 78 (241)
T ss_pred CEEeeEEEecCC--ccEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHh
Confidence 478999999963 146999999999999999999999999999999999999999999999999998776 456889
Q ss_pred ceEEEecCCCCCc-ccHHHHHccCCCC-----------CC---HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCCh
Q 047171 1055 CIALVSQEPTLFA-GTIRQNIVYGKEV-----------AT---EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSG 1119 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~-gTIreNl~~~~~~-----------~~---deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSG 1119 (1224)
.++|+||++.+|. .|++||+.++... .+ ++++.++++.. |++......+.+|||
T Consensus 79 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~ 147 (241)
T cd03256 79 QIGMIFQQFNLIERLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV-----------GLLDKAYQRADQLSG 147 (241)
T ss_pred ccEEEcccCcccccCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc-----------CChhhhCCCcccCCH
Confidence 9999999998886 6999999864311 11 12233333333 343344556778999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1120 GQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1120 GQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
|||||++||||++++|+||||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 148 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~ 227 (241)
T cd03256 148 GQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDG 227 (241)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeec
Confidence 99999999999999999999999999999999999999999875 37899999999999984 9999999999999999
Q ss_pred ChhHHh
Q 047171 1197 TQSSLL 1202 (1224)
Q Consensus 1197 t~~eLl 1202 (1224)
+++++.
T Consensus 228 ~~~~~~ 233 (241)
T cd03256 228 PPAELT 233 (241)
T ss_pred CHHHhh
Confidence 999874
No 168
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=2.1e-41 Score=378.80 Aligned_cols=219 Identities=31% Similarity=0.464 Sum_probs=194.7
Q ss_pred cccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhc
Q 047171 975 KGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRS 1054 (1224)
Q Consensus 975 ~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~ 1054 (1224)
.+.|+++|+++.. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||
T Consensus 37 ~~~l~i~nls~~~-----~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~~G~I~i~g------------- 98 (282)
T cd03291 37 DNNLFFSNLCLVG-----APVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPSEGKIKHSG------------- 98 (282)
T ss_pred CCeEEEEEEEEec-----ccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECC-------------
Confidence 4579999999852 3599999999999999999999999999999999999999999999998
Q ss_pred ceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1055 CIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
+++|+||++.+|++|++||+.++.. ..+.++.++++..++.+.+..+|.++++.+++.+.+||||||||++|||||+++
T Consensus 99 ~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~~~~LSgGq~qrv~lAraL~~~ 177 (282)
T cd03291 99 RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEGGITLSGGQRARISLARAVYKD 177 (282)
T ss_pred EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCCCCcCCHHHHHHHHHHHHHhcC
Confidence 3999999999999999999987632 234456677777888899999999999999999999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHH-HHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhcCCCchhHHH
Q 047171 1135 PMILLLDEATSALDSASENLVQEAL-EKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l-~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l 1213 (1224)
|++|||||||++||+++...+.+.+ +.+.+++|+|+|||+++.+..||+|++|++|++++.|+++++... ...|.+.
T Consensus 178 p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~--~~~~~~~ 255 (282)
T cd03291 178 ADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSSYFYGTFSELQSL--RPDFSSK 255 (282)
T ss_pred CCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEEEEECCHHHHHhc--chHHHHH
Confidence 9999999999999999999888754 555568999999999999988999999999999999999999864 3455544
Q ss_pred H
Q 047171 1214 I 1214 (1224)
Q Consensus 1214 ~ 1214 (1224)
+
T Consensus 256 ~ 256 (282)
T cd03291 256 L 256 (282)
T ss_pred H
Confidence 4
No 169
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=4.7e-42 Score=375.28 Aligned_cols=217 Identities=29% Similarity=0.454 Sum_probs=180.7
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHH-hcce
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKL-RSCI 1056 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~l-R~~i 1056 (1224)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (222)
T cd03224 1 LEVENLNAGYGK---SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGI 77 (222)
T ss_pred CEEeeEEeecCC---eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCe
Confidence 578999999963 369999999999999999999999999999999999999999999999999988777654 6789
Q ss_pred EEEecCCCCCcc-cHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 047171 1057 ALVSQEPTLFAG-TIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNP 1135 (1224)
Q Consensus 1057 ~~V~Qdp~LF~g-TIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p 1135 (1224)
+|+||++.+|.+ |++||+.++.......+..+. +.+.+..++ +++........+||||||||++||||++++|
T Consensus 78 ~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p 151 (222)
T cd03224 78 GYVPEGRRIFPELTVEENLLLGAYARRRAKRKAR-----LERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRP 151 (222)
T ss_pred EEeccccccCCCCcHHHHHHHHhhhcCchhHHHH-----HHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCC
Confidence 999999999986 999999876432211111111 111222211 1233344556689999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1136 MILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1136 ~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 152 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 221 (222)
T cd03224 152 KLLLLDEPSEGLAPKIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELLA 221 (222)
T ss_pred CEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHhc
Confidence 9999999999999999999999998875 57899999999999866 99999999999999999988753
No 170
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-42 Score=387.63 Aligned_cols=216 Identities=26% Similarity=0.493 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCCC--ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCC----CCHHH
Q 047171 978 IELKNVFFSYPSRPD--QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKS----YNLRK 1051 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----~~~~~ 1051 (1224)
|+++||+|+|+.... .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.. .+...
T Consensus 2 i~~~~v~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 81 (288)
T PRK13643 2 IKFEKVNYTYQPNSPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKP 81 (288)
T ss_pred EEEEEEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHH
Confidence 789999999973211 359999999999999999999999999999999999999999999999999853 34567
Q ss_pred HhcceEEEecCC--CCCcccHHHHHccCCCC--CCHHHH----HHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1052 LRSCIALVSQEP--TLFAGTIRQNIVYGKEV--ATEAEI----RKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1052 lR~~i~~V~Qdp--~LF~gTIreNl~~~~~~--~~deei----~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
+|++++||+|+| .+|..|+.||+.++... .+.+++ .++++..++. +........+|||||||
T Consensus 82 ~~~~ig~v~q~~~~~l~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~----------~~~~~~~~~~LSgGqkq 151 (288)
T PRK13643 82 VRKKVGVVFQFPESQLFEETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLA----------DEFWEKSPFELSGGQMR 151 (288)
T ss_pred HHhhEEEEecCcchhcccchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCC----------hhhccCCcccCCHHHHH
Confidence 899999999998 78999999999876321 233332 2333333321 11234566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChhHH
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQ-KADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
|++|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+. .||+|++|++|+++++|+++++
T Consensus 152 rvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~ 231 (288)
T PRK13643 152 RVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDV 231 (288)
T ss_pred HHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999998865 4789999999999885 4999999999999999999998
Q ss_pred hh
Q 047171 1202 LS 1203 (1224)
Q Consensus 1202 l~ 1203 (1224)
..
T Consensus 232 ~~ 233 (288)
T PRK13643 232 FQ 233 (288)
T ss_pred Hc
Confidence 75
No 171
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=3.6e-42 Score=375.54 Aligned_cols=211 Identities=25% Similarity=0.445 Sum_probs=179.1
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++||++.|++. +.++|+|+||+|++||.+||+||||||||||+++|.|+++|++|+|.+||.++... ...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (220)
T cd03263 1 LQIRNLTKTYKKG-TKPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTD-RKAARQSLG 78 (220)
T ss_pred CEEEeeEEEeCCC-CceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccc-hHHHhhhEE
Confidence 5789999999642 24699999999999999999999999999999999999999999999999998764 366788999
Q ss_pred EEecCCCCC-cccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLF-AGTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF-~gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||++.+| ..|++||+.++.. ..+. +++.++++..++.+ .......+||||||||++||||
T Consensus 79 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~la~a 147 (220)
T cd03263 79 YCPQFDALFDELTVREHLRFYARLKGLPKSEIKEEVELLLRVLGLTD-----------KANKRARTLSGGMKRKLSLAIA 147 (220)
T ss_pred EecCcCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHH-----------HHhChhhhCCHHHHHHHHHHHH
Confidence 999999998 5799999986421 1122 22333344333322 2233445799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 148 LIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999999999999999999999988778999999999999865 999999999999999999875
No 172
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=2e-42 Score=376.20 Aligned_cols=203 Identities=28% Similarity=0.451 Sum_probs=172.9
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHH---HHhc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLR---KLRS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~---~lR~ 1054 (1224)
|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+.. .+|+
T Consensus 2 l~~~~l~~~~~~~-~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 80 (216)
T TIGR00960 2 IRFEQVSKAYPGG-HQPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRR 80 (216)
T ss_pred eEEEEEEEEecCC-CeeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHH
Confidence 7899999999632 24699999999999999999999999999999999999999999999999998776543 4788
Q ss_pred ceEEEecCCCCCc-ccHHHHHccCCC--CC----CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1055 CIALVSQEPTLFA-GTIRQNIVYGKE--VA----TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~-gTIreNl~~~~~--~~----~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
+++|+||+|.+|. .|++||+.++.. .. .++++.++++..++.++.. ....+||||||||++|
T Consensus 81 ~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv~l 149 (216)
T TIGR00960 81 HIGMVFQDHRLLSDRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAH-----------ALPMQLSGGEQQRVAI 149 (216)
T ss_pred hceEEecCccccccccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHHHH
Confidence 9999999999886 599999986421 11 2334555666555544432 3345799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKV 1192 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~I 1192 (1224)
||||+++|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+|
T Consensus 150 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 150 ARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred HHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999998874 47899999999999876 999999999975
No 173
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.8e-42 Score=386.12 Aligned_cols=216 Identities=29% Similarity=0.535 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|+.. .+++|+|+||+|++||.+||+||||||||||+++|+|+++|++|+|.+||.++...+...+++.+
T Consensus 5 ~l~~~~l~~~~~~~-~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i 83 (279)
T PRK13635 5 IIRVEHISFRYPDA-ATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQV 83 (279)
T ss_pred eEEEEEEEEEeCCC-CccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhhe
Confidence 48999999999642 34699999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEecCC--CCCcccHHHHHccCCCC--CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEP--TLFAGTIRQNIVYGKEV--ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp--~LF~gTIreNl~~~~~~--~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+|+||+| .+++.|++|||.++... .+. +++.++++..++.+++. .....||||||||++||
T Consensus 84 ~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qrv~la 152 (279)
T PRK13635 84 GMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLN-----------REPHRLSGGQKQRVAIA 152 (279)
T ss_pred EEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhh-----------CCcccCCHHHHHHHHHH
Confidence 9999998 46778999999875321 232 33455555555555443 33457999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 153 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 153 GVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999999999998764 7899999999999988999999999999999999988753
No 174
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.3e-42 Score=385.04 Aligned_cols=219 Identities=31% Similarity=0.498 Sum_probs=182.4
Q ss_pred EEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHH----hc
Q 047171 979 ELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKL----RS 1054 (1224)
Q Consensus 979 ~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~l----R~ 1054 (1224)
.++|+++.|. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ ++
T Consensus 26 ~~~~~~~~~~---~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~ 102 (269)
T cd03294 26 SKEEILKKTG---QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRK 102 (269)
T ss_pred hhhhhhhhcC---CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcC
Confidence 4667777775 3468999999999999999999999999999999999999999999999999987765543 46
Q ss_pred ceEEEecCCCCCc-ccHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1055 CIALVSQEPTLFA-GTIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~-gTIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
+++|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.+++ .....+||||||||++|
T Consensus 103 ~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrv~l 171 (269)
T cd03294 103 KISMVFQSFALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWE-----------HKYPDELSGGMQQRVGL 171 (269)
T ss_pred cEEEEecCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-----------hCCcccCCHHHHHHHHH
Confidence 8999999999885 699999986421 111 23344555555554443 33345799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|||++++|+||||||||++||+.+.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 172 Aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 172 ARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999875 37899999999999865 999999999999999999999875
Q ss_pred CCCchhHH
Q 047171 1205 GNGGAYYS 1212 (1224)
Q Consensus 1205 ~~~g~y~~ 1212 (1224)
+...|.+
T Consensus 252 -~~~~~~~ 258 (269)
T cd03294 252 -PANDYVR 258 (269)
T ss_pred -cCcHHHH
Confidence 3444443
No 175
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-41 Score=385.43 Aligned_cols=220 Identities=32% Similarity=0.533 Sum_probs=182.9
Q ss_pred EEEEEEEEECCCCC--CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCC----CCHHH
Q 047171 978 IELKNVFFSYPSRP--DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKS----YNLRK 1051 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----~~~~~ 1051 (1224)
|+++|++++|+... ..++|+||||+|++||++||+|+||||||||+++|.|+++|++|+|.+||+++.. .+...
T Consensus 3 l~~~~l~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (290)
T PRK13634 3 ITFQKVEHRYQYKTPFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKP 82 (290)
T ss_pred EEEEEEEEEECCCCcccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHH
Confidence 78999999996421 1469999999999999999999999999999999999999999999999999853 34567
Q ss_pred HhcceEEEecCC--CCCcccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccc-cccCCCCCCCChHHHHHHH
Q 047171 1052 LRSCIALVSQEP--TLFAGTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYD-TYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1052 lR~~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSGGQrQRla 1126 (1224)
+|++++||||+| .+|+.|++|||.++.. ..+.++.++.+ .+.+..+ |++ ........+||||||||++
T Consensus 83 ~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~-----~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~ 155 (290)
T PRK13634 83 LRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKA-----REMIELV--GLPEELLARSPFELSGGQMRRVA 155 (290)
T ss_pred HHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHC--CCChhhhhCCcccCCHHHHHHHH
Confidence 888999999998 6888999999987632 22333332211 1222222 332 1234556789999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
|||||+.+|++|||||||++||+.+...+.+.|+++.+ +.|||+|||+++.+.. ||||++|++|++++.|+++++.+
T Consensus 156 lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 235 (290)
T PRK13634 156 IAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFA 235 (290)
T ss_pred HHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999865 99999999999999999999875
Q ss_pred c
Q 047171 1204 M 1204 (1224)
Q Consensus 1204 ~ 1204 (1224)
.
T Consensus 236 ~ 236 (290)
T PRK13634 236 D 236 (290)
T ss_pred C
Confidence 3
No 176
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-42 Score=384.17 Aligned_cols=217 Identities=30% Similarity=0.534 Sum_probs=187.9
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++....++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 4 ~l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i 83 (277)
T PRK13642 4 ILEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKI 83 (277)
T ss_pred eEEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcce
Confidence 48999999999743334699999999999999999999999999999999999999999999999999887888889999
Q ss_pred EEEecCC--CCCcccHHHHHccCCC--CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEP--TLFAGTIRQNIVYGKE--VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp--~LF~gTIreNl~~~~~--~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+|+||+| .++..|+.|||.++.. ..++++ +.++++.+++.++. ......||||||||++||
T Consensus 84 ~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrv~lA 152 (277)
T PRK13642 84 GMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFK-----------TREPARLSGGQKQRVAVA 152 (277)
T ss_pred EEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHh-----------hCCcccCCHHHHHHHHHH
Confidence 9999998 4778899999986522 223333 34445555554432 234567999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++++.|++++++..
T Consensus 153 raL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 153 GIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999998764 7899999999999988999999999999999999998764
No 177
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-42 Score=378.29 Aligned_cols=218 Identities=34% Similarity=0.573 Sum_probs=184.3
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
++++||+++|++. .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 1 l~~~~l~~~~~~~--~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (242)
T cd03295 1 IEFENVTKRYGGG--KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIG 78 (242)
T ss_pred CEEEEEEEEeCCc--ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceE
Confidence 4789999999641 45999999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEecCCCCCc-ccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhccccccc--ccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDT--YCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt--~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
|+||+|.+|. .|++||+.++.. ..+.++.. ..+.+.+..+ |+.. .....+.+||||||||++||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~ 151 (242)
T cd03295 79 YVIQQIGLFPHMTVEENIALVPKLLKWPKEKIR-----ERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALA 151 (242)
T ss_pred EEccCccccCCCcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHh
Confidence 9999999986 699999986521 11211111 1122333333 3332 345566789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
++|++|||||||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 152 ~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 152 ADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999999999999999999998753 7999999999998765 999999999999999999999764
No 178
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-42 Score=382.48 Aligned_cols=220 Identities=27% Similarity=0.447 Sum_probs=188.3
Q ss_pred cccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCC--C
Q 047171 975 KGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKS--Y 1047 (1224)
Q Consensus 975 ~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~ 1047 (1224)
.+.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++.. .
T Consensus 17 ~~~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~ 93 (267)
T PRK14235 17 EIKMRARDVSVFYGE---KQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRL 93 (267)
T ss_pred CceEEEEeEEEEECC---EEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECccccc
Confidence 457999999999963 4699999999999999999999999999999999999975 89999999999864 3
Q ss_pred CHHHHhcceEEEecCCCCCcccHHHHHccCCC--CC--C----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCCh
Q 047171 1048 NLRKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VA--T----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSG 1119 (1224)
Q Consensus 1048 ~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~--~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSG 1119 (1224)
+...+|++++|+||+|.+|..|++||+.++.. .. + ++++.++++..++.+++. ......+.+|||
T Consensus 94 ~~~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSg 166 (267)
T PRK14235 94 DVVELRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVK-------DRLHEPGTGLSG 166 (267)
T ss_pred chHHHhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhh-------HHhhCCcccCCH
Confidence 56678999999999999998999999986421 10 1 233455555555543321 233456678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 047171 1120 GQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQ 1198 (1224)
Q Consensus 1120 GQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~ 1198 (1224)
|||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|+++++|++
T Consensus 167 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~ 246 (267)
T PRK14235 167 GQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDT 246 (267)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCH
Confidence 9999999999999999999999999999999999999999988777899999999999865 999999999999999999
Q ss_pred hHHhhc
Q 047171 1199 SSLLSM 1204 (1224)
Q Consensus 1199 ~eLl~~ 1204 (1224)
++++..
T Consensus 247 ~~~~~~ 252 (267)
T PRK14235 247 EKMFTN 252 (267)
T ss_pred HHHHhC
Confidence 999864
No 179
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=6.1e-42 Score=379.68 Aligned_cols=212 Identities=33% Similarity=0.520 Sum_probs=180.1
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH---HHHhc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL---RKLRS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~---~~lR~ 1054 (1224)
|+++||+++|+. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (243)
T TIGR02315 2 LEVENLSKVYPN--GKQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRR 79 (243)
T ss_pred eEEEeeeeecCC--CcceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHh
Confidence 689999999961 3469999999999999999999999999999999999999999999999999887654 34788
Q ss_pred ceEEEecCCCCCc-ccHHHHHccCCCC-----------CC---HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCCh
Q 047171 1055 CIALVSQEPTLFA-GTIRQNIVYGKEV-----------AT---EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSG 1119 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~-gTIreNl~~~~~~-----------~~---deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSG 1119 (1224)
+++|+||++.+|. .|++||+.++... .. ++++.++++.. |++........+|||
T Consensus 80 ~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSg 148 (243)
T TIGR02315 80 RIGMIFQHYNLIERLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV-----------GLADKAYQRADQLSG 148 (243)
T ss_pred heEEEcCCCcccccccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc-----------CcHhhhcCCcccCCH
Confidence 9999999998886 6999999865311 01 12233333333 333344556678999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1120 GQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1120 GQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
|||||++|||||+++|++|||||||++||+++.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 149 G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~ 228 (243)
T TIGR02315 149 GQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDG 228 (243)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999875 37899999999999865 9999999999999999
Q ss_pred ChhHHh
Q 047171 1197 TQSSLL 1202 (1224)
Q Consensus 1197 t~~eLl 1202 (1224)
+++++.
T Consensus 229 ~~~~~~ 234 (243)
T TIGR02315 229 APSELD 234 (243)
T ss_pred CHHHhC
Confidence 999873
No 180
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=8.8e-42 Score=395.09 Aligned_cols=212 Identities=33% Similarity=0.535 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|+|+++|++|+|.+||.++...++. ++++
T Consensus 14 ~L~l~~l~~~~~~---~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~i 88 (375)
T PRK09452 14 LVELRGISKSFDG---KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHV 88 (375)
T ss_pred eEEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCE
Confidence 5999999999963 4589999999999999999999999999999999999999999999999999877654 5789
Q ss_pred EEEecCCCCCc-ccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+||+|++.+|. .|++|||.|+.. ..+. +++.++++..++.++..+. ..+||||||||++|||
T Consensus 89 g~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------p~~LSgGq~QRVaLAR 157 (375)
T PRK09452 89 NTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRK-----------PHQLSGGQQQRVAIAR 157 (375)
T ss_pred EEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----------hhhCCHHHHHHHHHHH
Confidence 99999999996 599999998642 1222 3455556666665554443 4579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||+++|++||||||||+||..+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|+|++.|+++++...
T Consensus 158 aL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 158 AVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999998764 7899999999998755 999999999999999999999886
No 181
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.7e-42 Score=394.57 Aligned_cols=212 Identities=31% Similarity=0.460 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|++||.++...+. .|+++
T Consensus 2 ~L~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i 76 (353)
T PRK10851 2 SIEIANIKKSFGR---TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKV 76 (353)
T ss_pred EEEEEEEEEEeCC---eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCE
Confidence 3889999999963 459999999999999999999999999999999999999999999999999987654 46789
Q ss_pred EEEecCCCCCc-ccHHHHHccCCCC------CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKEV------ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~~------~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
+||+|++.+|. .|++||+.++... .+. +++.++++..++.++ ......+||||||||+
T Consensus 77 ~~v~Q~~~l~p~~tv~eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LSgGq~QRv 145 (353)
T PRK10851 77 GFVFQHYALFRHMTVFDNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHL-----------ADRYPAQLSGGQKQRV 145 (353)
T ss_pred EEEecCcccCCCCcHHHHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchh-----------hhCChhhCCHHHHHHH
Confidence 99999999997 5999999986321 122 234444444444333 3344568999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
+|||||+++|++||||||||+||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|+|++.|+++++.
T Consensus 146 alArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~ 225 (353)
T PRK10851 146 ALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVW 225 (353)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 999999999999999999999999999999999998764 7899999999999766 9999999999999999999998
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
.+
T Consensus 226 ~~ 227 (353)
T PRK10851 226 RE 227 (353)
T ss_pred hC
Confidence 76
No 182
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-41 Score=380.49 Aligned_cols=219 Identities=30% Similarity=0.465 Sum_probs=187.0
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCC--CCC
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIK--SYN 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~--~~~ 1048 (1224)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||.++. ..+
T Consensus 12 ~~l~i~nl~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~ 88 (269)
T PRK14259 12 IIISLQNVTISYGT---FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVD 88 (269)
T ss_pred ceEEEEeEEEEECC---EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCC
Confidence 46999999999963 459999999999999999999999999999999999987 58999999999886 356
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHccCCCC--CC---HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1049 LRKLRSCIALVSQEPTLFAGTIRQNIVYGKEV--AT---EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~--~~---deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
...+|++++|+||++.+|..|++||+.++... .. ++++.++++..++.+ +++........+|||||||
T Consensus 89 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~q 161 (269)
T PRK14259 89 PVEVRRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAVWD-------ECKDKLNESGYSLSGGQQQ 161 (269)
T ss_pred HHHHhhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcc-------hhhhhhCCCcccCCHHHHH
Confidence 67789999999999999989999999876321 11 233445555554432 2223344566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeC-----------CE
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKN-----------GK 1191 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~-----------G~ 1191 (1224)
|++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++ |+
T Consensus 162 rl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~ 241 (269)
T PRK14259 162 RLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGY 241 (269)
T ss_pred HHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccce
Confidence 999999999999999999999999999999999999988778899999999999865 999999996 67
Q ss_pred EEEecChhHHhhc
Q 047171 1192 VVEQGTQSSLLSM 1204 (1224)
Q Consensus 1192 Ive~Gt~~eLl~~ 1204 (1224)
++|.|++++++..
T Consensus 242 ~~~~~~~~~~~~~ 254 (269)
T PRK14259 242 LVEFNETKKIFNS 254 (269)
T ss_pred EEEeCCHHHHHhC
Confidence 9999999999875
No 183
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-42 Score=381.08 Aligned_cols=218 Identities=30% Similarity=0.419 Sum_probs=185.0
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCC--CCCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIK--SYNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~--~~~~ 1049 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++. +.+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (253)
T PRK14267 4 AIETVNLRVYYGS---NHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDP 80 (253)
T ss_pred eEEEEeEEEEeCC---eeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999987 4999999999987 4556
Q ss_pred HHHhcceEEEecCCCCCcc-cHHHHHccCCC--C--CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1050 RKLRSCIALVSQEPTLFAG-TIRQNIVYGKE--V--ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~g-TIreNl~~~~~--~--~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
..+|++++|+||++.+|.. |++||+.++.. . .+. +++.++++..++.+.+ .........+||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G 153 (253)
T PRK14267 81 IEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEV-------KDRLNDYPSNLSGG 153 (253)
T ss_pred HHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccch-------hhhhccChhhCCHH
Confidence 6788999999999999975 99999986421 1 112 2344444444443222 12234566789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChh
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQS 1199 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~ 1199 (1224)
||||++||||++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 154 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 233 (253)
T PRK14267 154 QRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTR 233 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999988777999999999999865 9999999999999999999
Q ss_pred HHhhc
Q 047171 1200 SLLSM 1204 (1224)
Q Consensus 1200 eLl~~ 1204 (1224)
+++..
T Consensus 234 ~~~~~ 238 (253)
T PRK14267 234 KVFEN 238 (253)
T ss_pred HHHhC
Confidence 99864
No 184
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.2e-41 Score=375.16 Aligned_cols=216 Identities=28% Similarity=0.519 Sum_probs=183.9
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~ 77 (236)
T TIGR03864 2 LEVAGLSFAYGA---RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLG 77 (236)
T ss_pred EEEEeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEE
Confidence 689999999963 46999999999999999999999999999999999999999999999999998766544 46899
Q ss_pred EEecCCCC-CcccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1058 LVSQEPTL-FAGTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1058 ~V~Qdp~L-F~gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
|+||++.+ +..|++||+.++.. ..+.++..+ .+.+++..+ |++........+||||||||++||||++++
T Consensus 78 ~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~ 150 (236)
T TIGR03864 78 VVFQQPTLDLDLSVRQNLRYHAALHGLSRAEARE-----RIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHR 150 (236)
T ss_pred EeCCCCCCcccCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcC
Confidence 99999987 56899999986532 122222111 123344433 555556667778999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 151 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 151 PALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred CCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 99999999999999999999999999875 47899999999999988999999999999999999999864
No 185
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.2e-42 Score=384.97 Aligned_cols=215 Identities=27% Similarity=0.512 Sum_probs=184.5
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCC--CCCHHHHhc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIK--SYNLRKLRS 1054 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~--~~~~~~lR~ 1054 (1224)
.|+++||+++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++. ..+...+|+
T Consensus 5 ~l~~~~l~~~~~~--~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~ 82 (283)
T PRK13636 5 ILKVEELNYNYSD--GTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRE 82 (283)
T ss_pred eEEEEeEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHh
Confidence 4899999999962 346999999999999999999999999999999999999999999999999984 344667899
Q ss_pred ceEEEecCC--CCCcccHHHHHccCCC--CCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHH
Q 047171 1055 CIALVSQEP--TLFAGTIRQNIVYGKE--VATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1055 ~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRla 1126 (1224)
+++|+||+| .+|+.|++||+.++.. ..+.+ .+.++++..++.+ .......+||||||||++
T Consensus 83 ~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~-----------~~~~~~~~LS~G~~qrl~ 151 (283)
T PRK13636 83 SVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEH-----------LKDKPTHCLSFGQKKRVA 151 (283)
T ss_pred hEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChh-----------hhhCCcccCCHHHHHHHH
Confidence 999999998 5788999999987532 12322 2344444444433 334556789999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChhHHhh
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQ-KADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
|||||+.+|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+. .||+|++|++|++++.|+++++++
T Consensus 152 laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 152 IAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFA 231 (283)
T ss_pred HHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999998764 789999999999987 499999999999999999999876
Q ss_pred c
Q 047171 1204 M 1204 (1224)
Q Consensus 1204 ~ 1204 (1224)
.
T Consensus 232 ~ 232 (283)
T PRK13636 232 E 232 (283)
T ss_pred C
Confidence 3
No 186
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.6e-42 Score=376.27 Aligned_cols=216 Identities=33% Similarity=0.507 Sum_probs=182.6
Q ss_pred EEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHH---HHh
Q 047171 978 IELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLR---KLR 1053 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~---~lR 1053 (1224)
|+++|++++|+++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 2 i~~~~l~~~~~~~~~~~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (233)
T cd03258 2 IELKNVSKVFGDTGGKVTALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKAR 81 (233)
T ss_pred eEEecceEEccCCCCceeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHH
Confidence 78999999996421 12699999999999999999999999999999999999999999999999999876654 357
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHH
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRla 1126 (1224)
++++|+||++.+|. .|++||+.++.. ..+ .+++.++++..+ ++........+||||||||++
T Consensus 82 ~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~ 150 (233)
T cd03258 82 RRIGMIFQHFNLLSSRTVFENVALPLEIAGVPKAEIEERVLELLELVG-----------LEDKADAYPAQLSGGQKQRVG 150 (233)
T ss_pred hheEEEccCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCC-----------ChhhhhcChhhCCHHHHHHHH
Confidence 89999999999997 699999986421 112 123334444433 333344455689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
||||++++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 151 la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 151 IARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred HHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 99999999999999999999999999999999998753 7899999999999866 99999999999999999999875
Q ss_pred c
Q 047171 1204 M 1204 (1224)
Q Consensus 1204 ~ 1204 (1224)
.
T Consensus 231 ~ 231 (233)
T cd03258 231 N 231 (233)
T ss_pred C
Confidence 3
No 187
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.6e-42 Score=373.37 Aligned_cols=203 Identities=35% Similarity=0.572 Sum_probs=172.2
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+ ..+++++
T Consensus 1 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~--~~~~~i~ 75 (213)
T cd03259 1 LELKGLSKTYGS---VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVP--PERRNIG 75 (213)
T ss_pred CeeeeeEEEeCC---eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCc--hhhccEE
Confidence 478999999963 46999999999999999999999999999999999999999999999999987654 3578899
Q ss_pred EEecCCCCCc-ccHHHHHccCCCC--CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKEV--ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~~--~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||+|.+|. .|++||+.++... .+. +++.++++..++ +........+||||||||++||||
T Consensus 76 ~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrl~la~a 144 (213)
T cd03259 76 MVFQDYALFPHLTVAENIAFGLKLRGVPKAEIRARVRELLELVGL-----------EGLLNRYPHELSGGQQQRVALARA 144 (213)
T ss_pred EEcCchhhccCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhhhhcChhhCCHHHHHHHHHHHH
Confidence 9999998886 6999999865321 122 223344444333 333444456899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
|+++|++|||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 145 LAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999999999999999999999999875 37899999999998866 9999999999999876
No 188
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-41 Score=382.45 Aligned_cols=218 Identities=28% Similarity=0.447 Sum_probs=183.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1049 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+.
T Consensus 21 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 97 (268)
T PRK14248 21 ILEVKDLSIYYGE---KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINV 97 (268)
T ss_pred eEEEEEEEEEeCC---ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccH
Confidence 5999999999963 469999999999999999999999999999999999865 689999999999864 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCCCC---C----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKEVA---T----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~---~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||++.+|++|++||+.++.... . ++.+.++++..++.+. +.......+.+||||||
T Consensus 98 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~ 170 (268)
T PRK14248 98 VNLRREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDE-------VKDRLHSSALSLSGGQQ 170 (268)
T ss_pred HHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcc-------hHHHHhcCcccCCHHHH
Confidence 56789999999999999999999998652111 1 1223444444333211 11233456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 171 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 250 (268)
T PRK14248 171 QRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQI 250 (268)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999998865 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
...
T Consensus 251 ~~~ 253 (268)
T PRK14248 251 FTS 253 (268)
T ss_pred HhC
Confidence 865
No 189
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.3e-41 Score=366.35 Aligned_cols=200 Identities=38% Similarity=0.558 Sum_probs=181.4
Q ss_pred EEEEEEEEECCCCCC--ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 978 IELKNVFFSYPSRPD--QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~--~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
|+++||+++|++..+ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+|| +
T Consensus 1 l~~~~l~~~~~~~~~~~~~il~~~s~~i~~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~ 67 (204)
T cd03250 1 ISVEDASFTWDSGEQETSFTLKDINLEVPKGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------S 67 (204)
T ss_pred CEEeEEEEecCCCCccccceeeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------E
Confidence 579999999964311 3699999999999999999999999999999999999999999999999 5
Q ss_pred eEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 047171 1056 IALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNP 1135 (1224)
Q Consensus 1056 i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p 1135 (1224)
++|+||+|.+|++|++||+.++.. .++++.+++++.+++.+++..+|.|+++.+.+.+.+||||||||++||||++.+|
T Consensus 68 i~~~~q~~~l~~~t~~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p 146 (204)
T cd03250 68 IAYVSQEPWIQNGTIRENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDA 146 (204)
T ss_pred EEEEecCchhccCcHHHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCC
Confidence 999999999999999999998643 3566777888888999999999999999999999999999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHH-HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCE
Q 047171 1136 MILLLDEATSALDSASENLVQE-ALEKMM-VGRTCVVVAHRLSTIQKADNIVVIKNGK 1191 (1224)
Q Consensus 1136 ~ILlLDEaTSaLD~~te~~I~~-~l~~~~-~~~TvI~IaHrl~ti~~aD~I~vl~~G~ 1191 (1224)
+++||||||++||+++.+.+.+ .+++.. +++|+|++||+++.+..||++++|++|+
T Consensus 147 ~llllDEP~~~LD~~~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 147 DIYLLDDPLSAVDAHVGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred CEEEEeCccccCCHHHHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9999999999999999888877 566554 4689999999999998899999999985
No 190
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=7.5e-42 Score=394.41 Aligned_cols=213 Identities=30% Similarity=0.478 Sum_probs=184.1
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCC--ceEEECCccCCCCCHHHHh
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQS--GSVMVDERNIKSYNLRKLR 1053 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~--G~I~idG~di~~~~~~~lR 1053 (1224)
|.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++ |+|.+||.++.+.++ .+
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~ 78 (362)
T TIGR03258 4 GGIRIDHLRVAYGA---NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HK 78 (362)
T ss_pred eEEEEEEEEEEECC---eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HH
Confidence 57999999999963 359999999999999999999999999999999999999999 999999999987665 46
Q ss_pred cceEEEecCCCCCcc-cHHHHHccCCC--CCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHH
Q 047171 1054 SCIALVSQEPTLFAG-TIRQNIVYGKE--VATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~g-TIreNl~~~~~--~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRla 1126 (1224)
++++||+|++.+|.. |++|||.|+.. ..+.+ ++.++++..++. ........+||||||||++
T Consensus 79 r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~-----------~~~~~~~~~LSgGq~QRva 147 (362)
T TIGR03258 79 RGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLG-----------DAAAHLPAQLSGGMQQRIA 147 (362)
T ss_pred CCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCC-----------chhhCChhhCCHHHHHHHH
Confidence 789999999999964 99999997632 12332 233444444443 3344455689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC---CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV---GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~---~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
|||||+++|++||||||||+||+.+...+++.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 148 LARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~ 227 (362)
T TIGR03258 148 IARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALY 227 (362)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHH
Confidence 99999999999999999999999999999999988754 6899999999999765 9999999999999999999998
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
..
T Consensus 228 ~~ 229 (362)
T TIGR03258 228 DA 229 (362)
T ss_pred hC
Confidence 76
No 191
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=378.25 Aligned_cols=218 Identities=28% Similarity=0.427 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCCCCHHH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKSYNLRK 1051 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~~~~~ 1051 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 79 (250)
T PRK14247 3 KIEIRDLKVSFGQ---VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIE 79 (250)
T ss_pred eEEEEeeEEEECC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHH
Confidence 4899999999963 3599999999999999999999999999999999999974 6999999999998888888
Q ss_pred HhcceEEEecCCCCC-cccHHHHHccCCCC----CC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1052 LRSCIALVSQEPTLF-AGTIRQNIVYGKEV----AT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1052 lR~~i~~V~Qdp~LF-~gTIreNl~~~~~~----~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
+|++++|+||+|.+| +.|++||+.++... .. ++++.++++..++.+.+. ........+||||||
T Consensus 80 ~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgG~~ 152 (250)
T PRK14247 80 LRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVK-------DRLDAPAGKLSGGQQ 152 (250)
T ss_pred HhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchh-------hhhcCCcccCCHHHH
Confidence 999999999999755 68999999865310 11 234455555555433221 123344567999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14247 153 QRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREV 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14247 233 FTN 235 (250)
T ss_pred HcC
Confidence 865
No 192
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=384.64 Aligned_cols=217 Identities=28% Similarity=0.501 Sum_probs=182.4
Q ss_pred cEEEEEEEEECCCCC--CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCC--------
Q 047171 977 FIELKNVFFSYPSRP--DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKS-------- 1046 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~-------- 1046 (1224)
.|+++||+++|++.. ..++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.++|.++..
T Consensus 2 ~i~~~~l~~~y~~~~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (305)
T PRK13651 2 QIKVKNIVKIFNKKLPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKE 81 (305)
T ss_pred EEEEEEEEEEECCCCCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceeccccccccccc
Confidence 388999999997432 1359999999999999999999999999999999999999999999999887632
Q ss_pred ----------------CCHHHHhcceEEEecCC--CCCcccHHHHHccCCC--CCCHHHH----HHHHHHHhHHHHHHhc
Q 047171 1047 ----------------YNLRKLRSCIALVSQEP--TLFAGTIRQNIVYGKE--VATEAEI----RKAAVLANAHEFISST 1102 (1224)
Q Consensus 1047 ----------------~~~~~lR~~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~deei----~~al~~a~l~~~I~~l 1102 (1224)
.+...+|++++||||+| .+|..|++|||.++.. ..+.+++ .++++..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~--------- 152 (305)
T PRK13651 82 KVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELV--------- 152 (305)
T ss_pred ccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHc---------
Confidence 13467889999999986 6888999999987632 2333333 3333333
Q ss_pred ccccc-cccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh
Q 047171 1103 EDGYD-TYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK 1180 (1224)
Q Consensus 1103 p~gld-t~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~ 1180 (1224)
|++ ........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.|+++. .|+|+|+|||+++.+..
T Consensus 153 --gL~~~~~~~~~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~ 230 (305)
T PRK13651 153 --GLDESYLQRSPFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLE 230 (305)
T ss_pred --CCChhhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHH
Confidence 332 23445667899999999999999999999999999999999999999999998875 48999999999998755
Q ss_pred -cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1181 -ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1181 -aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||||++|++|++++.|+++++.+.
T Consensus 231 ~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 231 WTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred hCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999998764
No 193
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.2e-41 Score=349.44 Aligned_cols=208 Identities=33% Similarity=0.549 Sum_probs=176.4
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHH---HHhccc
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLK---WLRSQM 393 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~~i 393 (1224)
-|++++|+|+|+++ ++++.++|+||||||||||+++|.|+..|++|+|.++|+|+.+++.+ .+|+++
T Consensus 8 ~I~vr~v~~~fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~~GeI~i~G~~i~~ls~~~~~~ir~r~ 87 (263)
T COG1127 8 LIEVRGVTKSFGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPDKGEILIDGEDIPQLSEEELYEIRKRM 87 (263)
T ss_pred eEEEeeeeeecCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCCCCeEEEcCcchhccCHHHHHHHHhhe
Confidence 48888999888753 46789999999999999999999999999999999999999988754 468999
Q ss_pred EEecCCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhcccccccc-ccCCCCCCChHHHHHHHHHHHh
Q 047171 394 GLVNQEPILFST-SIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETK-VGQFGVQLSGGQKQRIAIARAL 468 (1224)
Q Consensus 394 ~~v~Q~~~lf~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~-~~~~g~~LSgGq~qriaiARal 468 (1224)
|+++|.-.||+. ||+||+.|... ..+++++.+.+. . -++.. |+... ....+++||||++.|+|||||+
T Consensus 88 GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~-~----KL~~V--GL~~~~~~~~PsELSGGM~KRvaLARAi 160 (263)
T COG1127 88 GVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVL-M----KLELV--GLRGAAADLYPSELSGGMRKRVALARAI 160 (263)
T ss_pred eEEeeccccccccchhHhhheehHhhccCCHHHHHHHHH-H----HHHhc--CCChhhhhhCchhhcchHHHHHHHHHHH
Confidence 999999999977 99999998532 233444433221 1 12222 55555 3446789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 469 IRDPKILLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 469 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
..||+|+++|||||+|||.+...+.+.|+++++ |.|+|+|||+++++.. ||+|+++.||+|+..|+.+|+.+.
T Consensus 161 aldPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~s~~~i~Drv~~L~~gkv~~~Gt~~el~~s 236 (263)
T COG1127 161 ALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLDSLLTIADRVAVLADGKVIAEGTPEELLAS 236 (263)
T ss_pred hcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChHHHHhhhceEEEEeCCEEEEeCCHHHHHhC
Confidence 999999999999999999999999998887653 8899999999999987 999999999999999999999886
No 194
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.5e-41 Score=378.22 Aligned_cols=217 Identities=31% Similarity=0.491 Sum_probs=182.1
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC---------
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN--------- 1048 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~--------- 1048 (1224)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+++
T Consensus 1 i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 77 (252)
T TIGR03005 1 VRFSDVTKRFGI---LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPA 77 (252)
T ss_pred CEEEEEEEEeCC---eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccccccccccccc
Confidence 579999999963 46999999999999999999999999999999999999999999999999987653
Q ss_pred ----HHHHhcceEEEecCCCCCc-ccHHHHHccCCC---CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1049 ----LRKLRSCIALVSQEPTLFA-GTIRQNIVYGKE---VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1049 ----~~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~~---~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
...+|++++|++|++.+|. .|++||+.++.. ....++..+ .+.+.+..+ |++........+||||
T Consensus 78 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G 150 (252)
T TIGR03005 78 DEKHLRQMRNKIGMVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEK-----RAMELLDMV--GLADKADHMPAQLSGG 150 (252)
T ss_pred chhHHHHHhhCeEEEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhHhhcChhhcCHH
Confidence 2467899999999999885 799999987421 112222111 122333332 3444445566789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt 1197 (1224)
||||++||||++++|++|||||||++||+.+...+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 151 ~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~ 230 (252)
T TIGR03005 151 QQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGK 230 (252)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999998753 7899999999999865 99999999999999999
Q ss_pred hhHHhhc
Q 047171 1198 QSSLLSM 1204 (1224)
Q Consensus 1198 ~~eLl~~ 1204 (1224)
++++.+.
T Consensus 231 ~~~~~~~ 237 (252)
T TIGR03005 231 PDEIFRQ 237 (252)
T ss_pred HHHHhcC
Confidence 9999865
No 195
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.1e-41 Score=374.95 Aligned_cols=216 Identities=26% Similarity=0.469 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHH-hcce
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKL-RSCI 1056 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~l-R~~i 1056 (1224)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+...+ |+.+
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 77 (232)
T cd03218 1 LRAENLSKRYGK---RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGI 77 (232)
T ss_pred CeEEEEEEEeCC---EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccE
Confidence 578999999963 459999999999999999999999999999999999999999999999999988776554 5789
Q ss_pred EEEecCCCCCcc-cHHHHHccCCCC--CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1057 ALVSQEPTLFAG-TIRQNIVYGKEV--ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1057 ~~V~Qdp~LF~g-TIreNl~~~~~~--~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
+|+||++.+|.+ |++||+.++.+. ...++.. ..+.+.+..+ |++........+||||||||++||||++.
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~ 150 (232)
T cd03218 78 GYLPQEASIFRKLTVEENILAVLEIRGLSKKERE-----EKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALAT 150 (232)
T ss_pred EEecCCccccccCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999986 999999875321 1222211 1223344433 55555566777899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 151 ~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 151 NPKFLLLDEPFAGVDPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 999999999999999999999999998875 47899999999988765 99999999999999999999865
No 196
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.7e-42 Score=380.03 Aligned_cols=203 Identities=33% Similarity=0.500 Sum_probs=175.6
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
.|+++||+++|++. .++++++|+|||||||||+|++|+|+.+|++|+|.|||.++++++++. ++||+|
T Consensus 3 ~i~l~~v~K~yg~~~~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~~G~I~i~g~~vt~l~P~~--R~iamV 80 (338)
T COG3839 3 ELELKNVRKSFGSFEVLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPTSGEILIDGRDVTDLPPEK--RGIAMV 80 (338)
T ss_pred EEEEeeeEEEcCCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChhH--CCEEEE
Confidence 47888888888753 356799999999999999999999999999999999999999998876 689999
Q ss_pred cCCCCCCcc-cHHHHHhcCCCCC--C----HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhc
Q 047171 397 NQEPILFST-SIKENILIGKPGA--S----METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALI 469 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~~~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~ 469 (1224)
+|+..||+. ||+|||+||.... . ++++.++++..++ +..+..++.+|||||||||||||||+
T Consensus 81 FQ~yALyPhmtV~~Niaf~Lk~~~~~k~ei~~rV~eva~~L~l-----------~~lL~r~P~~LSGGQrQRVAlaRAlV 149 (338)
T COG3839 81 FQNYALYPHMTVYENIAFGLKLRGVPKAEIDKRVKEVAKLLGL-----------EHLLNRKPLQLSGGQRQRVALARALV 149 (338)
T ss_pred eCCccccCCCcHHHHhhhhhhhCCCchHHHHHHHHHHHHHcCC-----------hhHHhcCcccCChhhHHHHHHHHHHh
Confidence 999999976 9999999986532 2 3445555555544 44556667899999999999999999
Q ss_pred cCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhc
Q 047171 470 RDPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMN 542 (1224)
Q Consensus 470 ~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~ 542 (1224)
++|++++||||+|+||+.....+...|+++. -+.|+|.|||+..++.. ||||.||++|+|.+.|++.|+..++
T Consensus 150 r~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHDq~EAmtladri~Vm~~G~i~Q~g~p~ely~~P 225 (338)
T COG3839 150 RKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHDQVEAMTLADRIVVMNDGRIQQVGTPLELYERP 225 (338)
T ss_pred cCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCCHHHHHhhCCEEEEEeCCeeeecCChHHHhhCc
Confidence 9999999999999999999888888887754 37899999999998876 9999999999999999999998764
No 197
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=1.3e-41 Score=370.70 Aligned_cols=207 Identities=24% Similarity=0.446 Sum_probs=175.5
Q ss_pred EEEEEEEEECCCCCC-ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 978 IELKNVFFSYPSRPD-QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
|+++||+++|+++.. .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++.. ....+|+++
T Consensus 2 l~~~~v~~~~~~~~~~~~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i 80 (218)
T cd03266 2 ITADALTKRFRDVKKTVQAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRL 80 (218)
T ss_pred eEEEEEEEecCCCCccceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhE
Confidence 689999999974311 269999999999999999999999999999999999999999999999999875 456788999
Q ss_pred EEEecCCCCCcc-cHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFAG-TIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~g-TIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+|+||+|.+|.. |++||+.+... ..+. +++.++++..+ ++........+||||||||++|||
T Consensus 81 ~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LS~G~~qrv~lar 149 (218)
T cd03266 81 GFVSDSTGLYDRLTARENLEYFAGLYGLKGDELTARLEELADRLG-----------MEELLDRRVGGFSTGMRQKVAIAR 149 (218)
T ss_pred EEecCCcccCcCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------CHHHHhhhhhhcCHHHHHHHHHHH
Confidence 999999999985 99999976421 1122 23334444443 333444566789999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
|++++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 150 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 150 ALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 9999999999999999999999999999999875 47899999999998865 9999999999998865
No 198
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-41 Score=378.35 Aligned_cols=218 Identities=28% Similarity=0.449 Sum_probs=184.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC--C---CCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD--P---QSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--~~~ 1049 (1224)
.|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ | ++|+|.+||.++.. .+.
T Consensus 12 ~l~i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~ 88 (259)
T PRK14274 12 VYQINGMNLWYGQ---HHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDL 88 (259)
T ss_pred eEEEeeEEEEECC---eeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCH
Confidence 5899999999963 359999999999999999999999999999999999997 3 58999999998863 455
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCCC---CCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKEV---ATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~---~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||++.+|..|++||+.++... .++++ +.++++..++.+++ .......+.+||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~l~~~~~~LS~Gq~ 161 (259)
T PRK14274 89 VELRKNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEV-------KDRLHTQALSLSGGQQ 161 (259)
T ss_pred HHHhhceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhhhhCCcccCCHHHH
Confidence 6788999999999999999999999875321 12222 33334444443322 1233456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|+++++|+++++
T Consensus 162 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 241 (259)
T PRK14274 162 QRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKM 241 (259)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
+.+
T Consensus 242 ~~~ 244 (259)
T PRK14274 242 FSN 244 (259)
T ss_pred hhC
Confidence 865
No 199
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-41 Score=395.24 Aligned_cols=212 Identities=29% Similarity=0.474 Sum_probs=182.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+. .++++
T Consensus 3 ~l~i~~l~~~~~~---~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~--~~~~i 77 (369)
T PRK11000 3 SVTLRNVTKAYGD---VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPP--AERGV 77 (369)
T ss_pred EEEEEEEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--hHCCE
Confidence 4899999999963 459999999999999999999999999999999999999999999999999987665 35789
Q ss_pred EEEecCCCCCc-ccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+||||++.+|. .|++||+.++.. ..+. +++.++++..++.+ .......+||||||||++|||
T Consensus 78 ~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~-----------~~~~~~~~LSgGq~QRvaLAr 146 (369)
T PRK11000 78 GMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAH-----------LLDRKPKALSGGQRQRVAIGR 146 (369)
T ss_pred EEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChh-----------hhcCChhhCCHHHHHHHHHHH
Confidence 99999999996 599999997632 1222 23444444444433 333445689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||+++|++||||||||+||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 147 aL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 147 TLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999999988753 7899999999998865 999999999999999999999875
No 200
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=379.10 Aligned_cols=219 Identities=28% Similarity=0.440 Sum_probs=187.7
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCC--CC
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKS--YN 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~ 1048 (1224)
..|+++|++++|+ +.++|+|+||+|++||.+||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~---~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~ 95 (267)
T PRK14237 19 IALSTKDLHVYYG---KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEIN 95 (267)
T ss_pred eEEEEeeEEEEEC---CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCC
Confidence 3699999999995 3469999999999999999999999999999999999997 579999999999864 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHccCCCC---CC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHH
Q 047171 1049 LRKLRSCIALVSQEPTLFAGTIRQNIVYGKEV---AT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQ 1121 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~---~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQ 1121 (1224)
...+|+.++||||++.+|..|++||+.++... .+ ++++.++++..++.+++ +...+..+.+|||||
T Consensus 96 ~~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i-------~~~~~~~~~~LS~G~ 168 (267)
T PRK14237 96 VYEMRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQV-------KDDLHKSALTLSGGQ 168 (267)
T ss_pred hHHHhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchh-------hhhhcCCcccCCHHH
Confidence 66789999999999999999999999875221 12 23344445555543332 234556778899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhH
Q 047171 1122 KQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSS 1200 (1224)
Q Consensus 1122 rQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~e 1200 (1224)
|||++||||++++|++|||||||++||+.+...+.+.|+++.++.|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 169 ~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 248 (267)
T PRK14237 169 QQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRN 248 (267)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999998778999999999999865 99999999999999999999
Q ss_pred Hhhc
Q 047171 1201 LLSM 1204 (1224)
Q Consensus 1201 Ll~~ 1204 (1224)
+...
T Consensus 249 ~~~~ 252 (267)
T PRK14237 249 IFTN 252 (267)
T ss_pred HhcC
Confidence 9764
No 201
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=7.1e-42 Score=366.26 Aligned_cols=203 Identities=33% Similarity=0.546 Sum_probs=175.7
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEec
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVN 397 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 397 (1224)
++++|++|+|+++ +++++++|+||||||||||+|+|+|+.+|.+|+|++||+++.+++.+++.+++||||
T Consensus 3 L~~~~ls~~y~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~~G~V~l~g~~i~~~~~kelAk~ia~vp 82 (258)
T COG1120 3 LEVENLSFGYGGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPKSGEVLLDGKDIASLSPKELAKKLAYVP 82 (258)
T ss_pred eEEEEEEEEECCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCCchhhcCHHHHhhhEEEec
Confidence 5677777777643 367799999999999999999999999999999999999999999999999999999
Q ss_pred CCCC-CCcccHHHHHhcCCCC-------CC---HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHH
Q 047171 398 QEPI-LFSTSIKENILIGKPG-------AS---METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIAR 466 (1224)
Q Consensus 398 Q~~~-lf~~ti~~ni~~g~~~-------~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiAR 466 (1224)
|++. -|.-||+|-+.+|+-. .+ .+.+.++.+..++.++ ..+...+||||||||+.|||
T Consensus 83 Q~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~l-----------a~r~~~~LSGGerQrv~iAr 151 (258)
T COG1120 83 QSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHL-----------ADRPVDELSGGERQRVLIAR 151 (258)
T ss_pred cCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHH-----------hcCcccccChhHHHHHHHHH
Confidence 9974 5666999999999632 12 2245566666655554 45556889999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchh-hccCEEEEEeCceEEeecChHHHHhh
Q 047171 467 ALIRDPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTI-RKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 467 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~-~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||+++|+||+||||||+||...+-.+.+.++++. +|+|+|+|.|+++.. +.||++++|++|+++.+|+++|.+..
T Consensus 152 ALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~A~ryad~~i~lk~G~i~a~G~p~evlT~ 229 (258)
T COG1120 152 ALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNLAARYADHLILLKDGKIVAQGTPEEVLTE 229 (258)
T ss_pred HHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEeecCcchhcCH
Confidence 9999999999999999999999999999998865 489999999999887 55999999999999999999988764
No 202
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-41 Score=378.71 Aligned_cols=218 Identities=28% Similarity=0.436 Sum_probs=184.2
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCCC--CH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKSY--NL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~~ 1049 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++... +.
T Consensus 12 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 88 (258)
T PRK14268 12 QIKVENLNLWYGE---KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDV 88 (258)
T ss_pred eEEEeeeEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchH
Confidence 6999999999963 4599999999999999999999999999999999999985 799999999988653 34
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC--CCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
..+|+.++|+||++.+|+.|++||+.++.. ..+.+ ++.++++.+++.+.+ ..........|||||||
T Consensus 89 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LSgG~~q 161 (258)
T PRK14268 89 VELRKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDET-------SDRLKSPALSLSGGQQQ 161 (258)
T ss_pred HHHhhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcch-------hhhhcCChhhCCHHHHH
Confidence 567889999999999999999999986521 12222 234444444432211 12234556689999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
|++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 162 rv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 241 (258)
T PRK14268 162 RLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIF 241 (258)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999999988778999999999999866 9999999999999999999998
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
..
T Consensus 242 ~~ 243 (258)
T PRK14268 242 HN 243 (258)
T ss_pred cC
Confidence 64
No 203
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-41 Score=377.48 Aligned_cols=218 Identities=29% Similarity=0.464 Sum_probs=183.9
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC--C---CCceEEECCccCCCC--CH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD--P---QSGSVMVDERNIKSY--NL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~~--~~ 1049 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++ | ++|+|.+||.++... +.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14239 5 ILQVSDLSVYYNK---KKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDT 81 (252)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccch
Confidence 4899999999963 359999999999999999999999999999999999954 6 489999999998643 34
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC---CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE---VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~---~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++||||++.+|+.|++||+.++.. ...+ +++.++++..++.+.+ .+.......+||||||
T Consensus 82 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 154 (252)
T PRK14239 82 VDLRKEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEV-------KDRLHDSALGLSGGQQ 154 (252)
T ss_pred HhhhhcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhH-------HHHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 1111 2333444444433222 2334566778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 234 (252)
T PRK14239 155 QRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999998865 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
++.
T Consensus 235 ~~~ 237 (252)
T PRK14239 235 FMN 237 (252)
T ss_pred HhC
Confidence 865
No 204
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-41 Score=380.70 Aligned_cols=216 Identities=31% Similarity=0.566 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~l~~~nl~~~~~~~-~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i 85 (271)
T PRK13632 7 MIKVENVSFSYPNS-ENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKI 85 (271)
T ss_pred EEEEEeEEEEcCCC-CccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcce
Confidence 58999999999632 34699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEecCC--CCCcccHHHHHccCCC--CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEP--TLFAGTIRQNIVYGKE--VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp--~LF~gTIreNl~~~~~--~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+|+||+| .++..|++|||.++.. ..+.++ +.++++..++ +........+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LS~G~~qrl~la 154 (271)
T PRK13632 86 GIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGM-----------EDYLDKEPQNLSGGQKQRVAIA 154 (271)
T ss_pred EEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCC-----------HHHhhCCcccCCHHHHHHHHHH
Confidence 9999998 4567899999987532 123333 2333333343 3334455578999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 155 SVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 4899999999999888999999999999999999988764
No 205
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3.4e-41 Score=385.77 Aligned_cols=225 Identities=26% Similarity=0.382 Sum_probs=187.4
Q ss_pred cEEEEEEEEECCCCC----------CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCC
Q 047171 977 FIELKNVFFSYPSRP----------DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKS 1046 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~----------~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~ 1046 (1224)
.|+++|++++|+.+. ..++++|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~ 87 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLG 87 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCc
Confidence 589999999996421 2468999999999999999999999999999999999999999999999999988
Q ss_pred CCHHH---HhcceEEEecCC--CCC-cccHHHHHccCC----CCCCHHHHH----HHHHHHhHHHHHHhcccccccccCC
Q 047171 1047 YNLRK---LRSCIALVSQEP--TLF-AGTIRQNIVYGK----EVATEAEIR----KAAVLANAHEFISSTEDGYDTYCGE 1112 (1224)
Q Consensus 1047 ~~~~~---lR~~i~~V~Qdp--~LF-~gTIreNl~~~~----~~~~deei~----~al~~a~l~~~I~~lp~gldt~vge 1112 (1224)
++.+. +|++++||+|+| .+| ..||.|||.++. +..+.++.. ++++.+++. + .....
T Consensus 88 ~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~------~----~~~~~ 157 (331)
T PRK15079 88 MKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLL------P----NLINR 157 (331)
T ss_pred CCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCC------h----HHhcC
Confidence 87543 678999999999 477 479999997531 123444433 233333321 1 12345
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeC
Q 047171 1113 RGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKN 1189 (1224)
Q Consensus 1113 ~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~ 1189 (1224)
...+||||||||++|||||+.+|++||+||||++||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++
T Consensus 158 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~ 237 (331)
T PRK15079 158 YPHEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYL 237 (331)
T ss_pred CcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEEC
Confidence 5678999999999999999999999999999999999999999999998753 7899999999999976 999999999
Q ss_pred CEEEEecChhHHhhcCCCchhHH
Q 047171 1190 GKVVEQGTQSSLLSMGNGGAYYS 1212 (1224)
Q Consensus 1190 G~Ive~Gt~~eLl~~~~~g~y~~ 1212 (1224)
|+|+|.|++++++++ +...|.+
T Consensus 238 G~ive~g~~~~i~~~-~~~py~~ 259 (331)
T PRK15079 238 GHAVELGTYDEVYHN-PLHPYTK 259 (331)
T ss_pred CEEEEEcCHHHHHcC-CCCHHHH
Confidence 999999999999876 3445654
No 206
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.4e-41 Score=386.34 Aligned_cols=217 Identities=29% Similarity=0.492 Sum_probs=182.7
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|+ +..+|+||||+|++||++||+||||||||||+++|+|+++|++|+|.++|.|+...+ ...|+++
T Consensus 7 ~i~i~~l~k~~~---~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~i 82 (306)
T PRK13537 7 PIDFRNVEKRYG---DKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRV 82 (306)
T ss_pred eEEEEeEEEEEC---CeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcE
Confidence 699999999996 346999999999999999999999999999999999999999999999999997654 4578999
Q ss_pred EEEecCCCCCc-ccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
|||||++.+|. .|++||+.+... ..+..+..+.+ ..+.+.+ .++...++.+ .+||||||||++|||||+.
T Consensus 83 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~--~~~l~~~-~l~~~~~~~~----~~LS~G~~qrl~la~aL~~ 155 (306)
T PRK13537 83 GVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALV--PPLLEFA-KLENKADAKV----GELSGGMKRRLTLARALVN 155 (306)
T ss_pred EEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHH--HHHHHHc-CCchHhcCch----hhCCHHHHHHHHHHHHHhC
Confidence 99999999885 699999986422 12333222211 1112221 2333445555 4799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
+|++|||||||++||+.+.+.+++.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 156 ~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 156 DPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999999999999999999999999875 47899999999999976 999999999999999999999764
No 207
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-41 Score=368.33 Aligned_cols=203 Identities=25% Similarity=0.470 Sum_probs=175.4
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++||+++|++ .++|+|+||+|++| ++||+||||||||||+++|.|+++|++|+|.++|.++.+.+ ..+|++++
T Consensus 1 i~~~~~~~~~~~---~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 75 (211)
T cd03264 1 LQLENLTKRYGK---KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIG 75 (211)
T ss_pred CEEEEEEEEECC---EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheE
Confidence 579999999963 36999999999999 99999999999999999999999999999999999998766 77899999
Q ss_pred EEecCCCCCcc-cHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFAG-TIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~g-TIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||+|.+|.+ |++||+.+... ..+ ++++.++++..++.++. + ....+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~G~~qrv~la~a 144 (211)
T cd03264 76 YLPQEFGVYPNFTVREFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRA-------K----KKIGSLSGGMRRRVGIAQA 144 (211)
T ss_pred EecCCCcccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHH-------h----CchhhCCHHHHHHHHHHHH
Confidence 99999999875 99999976321 112 23445555555554432 2 2345799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
++++|++|||||||++||+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 145 LVGDPSILIVDEPTAGLDPEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999999999988777999999999999865 9999999999999875
No 208
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=4.3e-41 Score=374.42 Aligned_cols=218 Identities=33% Similarity=0.546 Sum_probs=183.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC--------
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN-------- 1048 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-------- 1048 (1224)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (250)
T PRK11264 3 AIEVKNLVKKFHG---QTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGL 79 (250)
T ss_pred cEEEeceEEEECC---eeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhH
Confidence 3899999999963 35999999999999999999999999999999999999999999999999886542
Q ss_pred HHHHhcceEEEecCCCCCc-ccHHHHHccCC---CCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHH
Q 047171 1049 LRKLRSCIALVSQEPTLFA-GTIRQNIVYGK---EVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~---~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQR 1124 (1224)
...+|++++||||++.+|. .|++||+.++. .....++..+. +.+.+..+ |++........+||||||||
T Consensus 80 ~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~Gq~qr 152 (250)
T PRK11264 80 IRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATAR-----ARELLAKV--GLAGKETSYPRRLSGGQQQR 152 (250)
T ss_pred HHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHH-----HHHHHHHc--CCcchhhCChhhCChHHHHH
Confidence 3567889999999999885 79999997641 11122222111 12333332 44444456677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
++||||++.+|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 v~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 153 VAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998875 47899999999999866 9999999999999999999997
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
+.
T Consensus 233 ~~ 234 (250)
T PRK11264 233 AD 234 (250)
T ss_pred cC
Confidence 64
No 209
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-41 Score=378.11 Aligned_cols=218 Identities=30% Similarity=0.496 Sum_probs=183.7
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1049 (1224)
.|+++|++|+|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.+||+++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~ 80 (251)
T PRK14251 4 IISAKDVHLSYGN---YEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDL 80 (251)
T ss_pred eEEEEeeEEEECC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchH
Confidence 4899999999963 469999999999999999999999999999999999997 479999999998854 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCCC--C-CH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKEV--A-TE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~--~-~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|+.++|++|++.+|+.|++||+.++... . .. +++.++++..++++.. .......+.+||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14251 81 VELRKEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKET-------KDNLDRNAQAFSGGQQ 153 (251)
T ss_pred HHhhccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcch-------HHHhccChhhCCHHHH
Confidence 5678899999999999999999999865321 1 11 2333444444432110 1123455678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|++|||||||++||+++.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14251 154 QRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEM 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778899999999999866 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
...
T Consensus 234 ~~~ 236 (251)
T PRK14251 234 FIA 236 (251)
T ss_pred HhC
Confidence 764
No 210
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-41 Score=375.07 Aligned_cols=218 Identities=28% Similarity=0.485 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC-----CceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ-----SGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--~~~ 1049 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 80 (251)
T PRK14249 4 KIKIRGVNFFYHK---HQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDV 80 (251)
T ss_pred eEEEEEEEEEECC---eeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccCh
Confidence 5899999999963 45999999999999999999999999999999999999987 6999999998864 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC--C-CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE--V-ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~-~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|+.++||||+|.+|+.|++||+.++.. . ... +.+.++++..++.+.+ .......+.+||||||
T Consensus 81 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~Gq~ 153 (251)
T PRK14249 81 VNLRKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEV-------KDNLHKSGLALSGGQQ 153 (251)
T ss_pred HHhhceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhh-------hhHhhCCcccCCHHHH
Confidence 678999999999999999999999987531 1 111 2233344444443332 2334567788999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14249 154 QRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988678999999999999877 899999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
...
T Consensus 234 ~~~ 236 (251)
T PRK14249 234 FSR 236 (251)
T ss_pred HhC
Confidence 765
No 211
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-41 Score=381.92 Aligned_cols=217 Identities=28% Similarity=0.485 Sum_probs=186.0
Q ss_pred cEEEEEEEEECCCCC---CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC-HHHH
Q 047171 977 FIELKNVFFSYPSRP---DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN-LRKL 1052 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~---~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-~~~l 1052 (1224)
-|+++|++++|++.. ++++|+|+||+|++||.+||+|+||||||||+++|.|+++|++|+|.+||.++.+.+ ...+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 83 (280)
T PRK13633 4 MIKCKNVSYKYESNEESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDI 83 (280)
T ss_pred eEEEeeeEEEcCCCCCCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHH
Confidence 489999999997421 246999999999999999999999999999999999999999999999999987654 4567
Q ss_pred hcceEEEecCCC--CCcccHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHH
Q 047171 1053 RSCIALVSQEPT--LFAGTIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1053 R~~i~~V~Qdp~--LF~gTIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQR 1124 (1224)
|++++|+||+|. +|..|+.+|+.++.. ..+ ++++.++++..++.++.. ....+||||||||
T Consensus 84 ~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~-----------~~~~~LS~G~~qr 152 (280)
T PRK13633 84 RNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRR-----------HAPHLLSGGQKQR 152 (280)
T ss_pred hhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhh-----------CCcccCCHHHHHH
Confidence 899999999984 677799999987631 112 234555555555554433 3446799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHh
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
++|||||+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+..||++++|++|++++.|+++++.
T Consensus 153 v~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (280)
T PRK13633 153 VAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIF 232 (280)
T ss_pred HHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999999875 378999999999999889999999999999999999987
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
..
T Consensus 233 ~~ 234 (280)
T PRK13633 233 KE 234 (280)
T ss_pred cC
Confidence 64
No 212
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=8.2e-42 Score=368.12 Aligned_cols=199 Identities=29% Similarity=0.527 Sum_probs=171.2
Q ss_pred EEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEE
Q 047171 979 ELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIAL 1058 (1224)
Q Consensus 979 ~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1058 (1224)
+++|++++|++. .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.. ..+|++++|
T Consensus 1 ~~~~l~~~~~~~--~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~ 75 (205)
T cd03226 1 RIENISFSYKKG--TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGY 75 (205)
T ss_pred CcccEEEEeCCc--CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEE
Confidence 368999999631 469999999999999999999999999999999999999999999999998754 457789999
Q ss_pred EecCC--CCCcccHHHHHccCCCCC--CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1059 VSQEP--TLFAGTIRQNIVYGKEVA--TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1059 V~Qdp--~LF~gTIreNl~~~~~~~--~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
+||+| .+|..|++||+.++.+.. .++++.++++..++.++.. .....||||||||++||||++++
T Consensus 76 ~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~laral~~~ 144 (205)
T cd03226 76 VMQDVDYQLFTDSVREELLLGLKELDAGNEQAETVLKDLDLYALKE-----------RHPLSLSGGQKQRLAIAAALLSG 144 (205)
T ss_pred EecChhhhhhhccHHHHHhhhhhhcCccHHHHHHHHHHcCCchhcC-----------CCchhCCHHHHHHHHHHHHHHhC
Confidence 99998 467899999998764322 2345666666666655433 33357999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVV 1193 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Iv 1193 (1224)
|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|+++
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 145 KDLLIFDEPTSGLDYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 99999999999999999999999999874 57899999999999875 9999999999985
No 213
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-41 Score=380.99 Aligned_cols=217 Identities=29% Similarity=0.529 Sum_probs=187.4
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCC---ceEEECCccCCCCCHHHH
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQS---GSVMVDERNIKSYNLRKL 1052 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~---G~I~idG~di~~~~~~~l 1052 (1224)
+.|+++|++++|++. ..++|+|+||+|++||++||+|+||||||||+++|+|+++|++ |+|.+||.++...+...+
T Consensus 4 ~~l~i~~l~~~~~~~-~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~ 82 (282)
T PRK13640 4 NIVEFKHVSFTYPDS-KKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDI 82 (282)
T ss_pred ceEEEEEEEEEcCCC-CccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHH
Confidence 359999999999642 2469999999999999999999999999999999999999987 899999999988777788
Q ss_pred hcceEEEecCC--CCCcccHHHHHccCCC--CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHH
Q 047171 1053 RSCIALVSQEP--TLFAGTIRQNIVYGKE--VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1053 R~~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQR 1124 (1224)
|++++||||+| .+++.|++|||.++.. ..+.++ +.++++..++.++ ......+||||||||
T Consensus 83 ~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~LS~G~~qr 151 (282)
T PRK13640 83 REKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDY-----------IDSEPANLSGGQKQR 151 (282)
T ss_pred HhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhH-----------hcCCcccCCHHHHHH
Confidence 99999999998 4678999999987532 223333 4455555555443 334456899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHh
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|++++++
T Consensus 152 v~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 231 (282)
T PRK13640 152 VAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIF 231 (282)
T ss_pred HHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 9999999999999999999999999999999999998753 78999999999999889999999999999999999887
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
..
T Consensus 232 ~~ 233 (282)
T PRK13640 232 SK 233 (282)
T ss_pred cC
Confidence 53
No 214
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-41 Score=375.12 Aligned_cols=219 Identities=31% Similarity=0.491 Sum_probs=185.6
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCC--CC
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKS--YN 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~ 1048 (1224)
|.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 2 ~~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~ 78 (250)
T PRK14240 2 GKISVKDLDLFYGD---FQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDID 78 (250)
T ss_pred CeEEEEEEEEEECC---ceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46899999999963 3599999999999999999999999999999999999863 68999999999864 45
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHccCCC--C-CC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHH
Q 047171 1049 LRKLRSCIALVSQEPTLFAGTIRQNIVYGKE--V-AT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQ 1121 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~-~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQ 1121 (1224)
...+|++++|+||++.+|+.|++||+.++.. . .+ ++++.++++.+++.+.+ .......+.+|||||
T Consensus 79 ~~~~~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LS~G~ 151 (250)
T PRK14240 79 VNQLRKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEV-------KDRLKKSALGLSGGQ 151 (250)
T ss_pred hHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------HHHHhcCCCCCCHHH
Confidence 5678999999999999999999999987521 1 11 23344444444443222 223345667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhH
Q 047171 1122 KQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSS 1200 (1224)
Q Consensus 1122 rQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~e 1200 (1224)
|||++||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 152 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~ 231 (250)
T PRK14240 152 QQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVD 231 (250)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999998866 99999999999999999999
Q ss_pred Hhhc
Q 047171 1201 LLSM 1204 (1224)
Q Consensus 1201 Ll~~ 1204 (1224)
+...
T Consensus 232 ~~~~ 235 (250)
T PRK14240 232 LFTN 235 (250)
T ss_pred HHhC
Confidence 9765
No 215
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.1e-42 Score=362.02 Aligned_cols=216 Identities=30% Similarity=0.471 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCc---cCCCCCHHHHh
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDER---NIKSYNLRKLR 1053 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~---di~~~~~~~lR 1053 (1224)
.|+++|++..|+ ..++++||||+|+.||.+|+.||||||||||+++|.|+..|++|.|.+||. |.+++ +.-.
T Consensus 2 ~i~i~~~~~~~~---~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~--~~~~ 76 (345)
T COG1118 2 SIRINNVKKRFG---AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNL--AVRD 76 (345)
T ss_pred ceeehhhhhhcc---cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhcc--chhh
Confidence 378889999886 346899999999999999999999999999999999999999999999999 77663 3445
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCC----CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHH
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKE----VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~----~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQR 1124 (1224)
++||+|+|+..||. .||++||.||.+ ..+ ...+.+.++.+++..+-.. .+.+||||||||
T Consensus 77 R~VGfvFQ~YALF~HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~r-----------yP~QLSGGQrQR 145 (345)
T COG1118 77 RKVGFVFQHYALFPHMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADR-----------YPAQLSGGQRQR 145 (345)
T ss_pred cceeEEEechhhcccchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhc-----------CchhcChHHHHH
Confidence 78999999999885 899999999962 112 2344555566665544333 356899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
+||||||...|++||||||.++||+.-...+++-|++.. -+.|+++|||+.+.+.. ||||+||++|+|...|+++|.
T Consensus 146 VALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev 225 (345)
T COG1118 146 VALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEV 225 (345)
T ss_pred HHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHH
Confidence 999999999999999999999999999999999998865 37899999999998755 999999999999999999999
Q ss_pred hhcCCCch
Q 047171 1202 LSMGNGGA 1209 (1224)
Q Consensus 1202 l~~~~~g~ 1209 (1224)
... ++..
T Consensus 226 ~~~-P~s~ 232 (345)
T COG1118 226 YDH-PASR 232 (345)
T ss_pred hcC-CCcc
Confidence 876 3443
No 216
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=378.85 Aligned_cols=222 Identities=27% Similarity=0.463 Sum_probs=185.6
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCCCC--HH
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKSYN--LR 1050 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~~~--~~ 1050 (1224)
-+++||+++|+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.++|.++...+ ..
T Consensus 6 ~~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~ 82 (251)
T PRK14244 6 ASVKNLNLWYG---SKQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVV 82 (251)
T ss_pred EEeeeEEEEEC---CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchH
Confidence 47899999996 3469999999999999999999999999999999999986 46999999999886543 34
Q ss_pred HHhcceEEEecCCCCCcccHHHHHccCCC--CC--C----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1051 KLRSCIALVSQEPTLFAGTIRQNIVYGKE--VA--T----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~--~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
.+|++++|+||++.+|.+|++||+.++.. .. . ++++.++++..++.+.+ .+.+...+.+||||||
T Consensus 83 ~~~~~i~~v~q~~~~~~~tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 155 (251)
T PRK14244 83 LLRAKVGMVFQKPNPFPKSIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEEL-------GDRLKDSAFELSGGQQ 155 (251)
T ss_pred HHhhhEEEEecCcccccCCHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchh-------hhHhhcChhhCCHHHH
Confidence 57899999999999999999999986521 11 1 22344445554443221 2234556778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|+||||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 235 (251)
T PRK14244 156 QRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEI 235 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999875 999999999999999999999
Q ss_pred hhcCCCchh
Q 047171 1202 LSMGNGGAY 1210 (1224)
Q Consensus 1202 l~~~~~g~y 1210 (1224)
.+. +...|
T Consensus 236 ~~~-~~~~~ 243 (251)
T PRK14244 236 FKN-PQSSK 243 (251)
T ss_pred hcC-CCChH
Confidence 875 34433
No 217
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-41 Score=379.29 Aligned_cols=220 Identities=30% Similarity=0.479 Sum_probs=188.0
Q ss_pred cccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCC--C
Q 047171 975 KGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKS--Y 1047 (1224)
Q Consensus 975 ~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~ 1047 (1224)
.+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .
T Consensus 23 ~~~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~ 99 (272)
T PRK14236 23 QTALEVRNLNLFYGD---KQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKV 99 (272)
T ss_pred CcEEEEEEEEEEECC---eeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECccccc
Confidence 446999999999963 3599999999999999999999999999999999999884 89999999999864 3
Q ss_pred CHHHHhcceEEEecCCCCCcccHHHHHccCCC--CC-C----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1048 NLRKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VA-T----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1048 ~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~-~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
+...+|++++|+||++.+|++|++||+.++.. .. . ++++.++++..++.+.+. +..+..+.+||||
T Consensus 100 ~~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 172 (272)
T PRK14236 100 DVAELRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVK-------DRLHENAFGLSGG 172 (272)
T ss_pred CHHHHhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHH-------HHhhCCcccCCHH
Confidence 45678999999999999999999999986521 11 1 123455555555433322 3445667889999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChh
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQS 1199 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~ 1199 (1224)
||||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++
T Consensus 173 q~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~ 252 (272)
T PRK14236 173 QQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTD 252 (272)
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHH
Confidence 999999999999999999999999999999999999999998778999999999999865 9999999999999999999
Q ss_pred HHhhc
Q 047171 1200 SLLSM 1204 (1224)
Q Consensus 1200 eLl~~ 1204 (1224)
++...
T Consensus 253 ~~~~~ 257 (272)
T PRK14236 253 TLFTS 257 (272)
T ss_pred HHhcC
Confidence 99764
No 218
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.9e-41 Score=369.56 Aligned_cols=209 Identities=25% Similarity=0.430 Sum_probs=178.0
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 76 (220)
T cd03265 1 IEVENLVKKYGD---FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIG 76 (220)
T ss_pred CEEEEEEEEECC---EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEE
Confidence 578999999963 4699999999999999999999999999999999999999999999999988653 356788999
Q ss_pred EEecCCCCCc-ccHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||++.+|. .|++||+.++.. ..+ ++++.++++..++.++. .....+||||||||++||||
T Consensus 77 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qr~~la~a 145 (220)
T cd03265 77 IVFQDLSVDDELTGWENLYIHARLYGVPGAERRERIDELLDFVGLLEAA-----------DRLVKTYSGGMRRRLEIARS 145 (220)
T ss_pred EecCCccccccCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHh-----------hCChhhCCHHHHHHHHHHHH
Confidence 9999999887 499999976421 111 23445555555554432 23345799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
++.+|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 146 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 146 LVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 9999999999999999999999999999988753 7899999999999876 999999999999999998875
No 219
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-41 Score=394.14 Aligned_cols=211 Identities=34% Similarity=0.489 Sum_probs=177.1
Q ss_pred cceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHH----hcceEEEecCCCCCc-c
Q 047171 994 MIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKL----RSCIALVSQEPTLFA-G 1068 (1224)
Q Consensus 994 ~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~l----R~~i~~V~Qdp~LF~-g 1068 (1224)
++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++.+.+...+ |++++||||++.+|. .
T Consensus 42 ~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l~~~~ 121 (400)
T PRK10070 42 LGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFALMPHM 121 (400)
T ss_pred EEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcCCCCC
Confidence 37999999999999999999999999999999999999999999999999998876654 468999999999996 5
Q ss_pred cHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEec
Q 047171 1069 TIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDE 1142 (1224)
Q Consensus 1069 TIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDE 1142 (1224)
|++||+.++.. ..+ ++++.++++..++.++ ......+||||||||++|||||+.+|+||||||
T Consensus 122 Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~-----------~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 122 TVLDNTAFGMELAGINAEERREKALDALRQVGLENY-----------AHSYPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChh-----------hhcCcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 99999987531 112 2334445555554443 334446899999999999999999999999999
Q ss_pred cCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchhHHHHH
Q 047171 1143 ATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIK 1215 (1224)
Q Consensus 1143 aTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~ 1215 (1224)
|||+||+.+.+.+++.|.++. .++|+|+|||+++.+.. ||+|++|++|++++.|++++++..+.+.+.+.++.
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~~~~~~v~~~~~ 266 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNNPANDYVRTFFR 266 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhCcccHHHHHHHh
Confidence 999999999999999998874 47899999999999865 99999999999999999999987632333344443
No 220
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.4e-41 Score=380.68 Aligned_cols=215 Identities=28% Similarity=0.501 Sum_probs=185.2
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.++++||+++|+.+ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+...+++++
T Consensus 3 ~l~~~~l~~~~~~~--~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i 80 (277)
T PRK13652 3 LIETRDLCYSYSGS--KEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFV 80 (277)
T ss_pred eEEEEEEEEEeCCC--CceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 37899999999632 3599999999999999999999999999999999999999999999999999887778889999
Q ss_pred EEEecCC--CCCcccHHHHHccCCC--CCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEP--TLFAGTIRQNIVYGKE--VATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp--~LF~gTIreNl~~~~~--~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+||||+| .+|+.|++||+.++.. ..+.+ .+.++++..++.++. ......||||||||++||
T Consensus 81 ~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Gq~qrl~la 149 (277)
T PRK13652 81 GLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELR-----------DRVPHHLSGGEKKRVAIA 149 (277)
T ss_pred EEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHh-----------cCCcccCCHHHHHHHHHH
Confidence 9999998 4788999999986531 22332 344445555544433 334468999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQ-KADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|||+.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+. .||||++|++|++++.|++++++..
T Consensus 150 raL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 150 GVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 999999999999999999999999999999988753 789999999999985 5999999999999999999999763
No 221
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-41 Score=371.99 Aligned_cols=210 Identities=25% Similarity=0.436 Sum_probs=178.0
Q ss_pred cEEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH---H
Q 047171 977 FIELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK---L 1052 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~---l 1052 (1224)
.++++||+++|+.+. ..++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+... +
T Consensus 5 ~l~~~~l~~~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (233)
T PRK11629 5 LLQCDNLCKRYQEGSVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAEL 84 (233)
T ss_pred eEEEEeEEEEcCCCCcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHH
Confidence 489999999997432 146999999999999999999999999999999999999999999999999998887654 3
Q ss_pred h-cceEEEecCCCCCcc-cHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHH
Q 047171 1053 R-SCIALVSQEPTLFAG-TIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1053 R-~~i~~V~Qdp~LF~g-TIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQR 1124 (1224)
| +.++|+||++.+|.. |++||+.++.. ..+. +++.++++.. |++........+||||||||
T Consensus 85 ~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgG~~qr 153 (233)
T PRK11629 85 RNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAV-----------GLEHRANHRPSELSGGERQR 153 (233)
T ss_pred HhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHc-----------CCchhhhCChhhCCHHHHHH
Confidence 3 689999999998875 99999986321 1122 2233333333 44444555667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecC
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt 1197 (1224)
++||||++.+|+||||||||++||+.+.+.+.+.|++.. +++|+|+|||+++.+..+|++++|++|+|++.|+
T Consensus 154 l~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 154 VAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 999999999999999999999999999999999999874 4789999999999999999999999999998875
No 222
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2e-41 Score=366.14 Aligned_cols=203 Identities=26% Similarity=0.429 Sum_probs=177.4
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+. ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~ 75 (208)
T cd03268 1 LKTNDLTKTYGK---KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIG 75 (208)
T ss_pred CEEEEEEEEECC---eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEE
Confidence 578999999953 4699999999999999999999999999999999999999999999999988764 56788999
Q ss_pred EEecCCCCC-cccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1058 LVSQEPTLF-AGTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1058 ~V~Qdp~LF-~gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
||||++.+| +.|++||+.++.. ..+++++.++++..++.+... .....||||||||++||||++++
T Consensus 76 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrv~la~al~~~ 144 (208)
T cd03268 76 ALIEAPGFYPNLTARENLRLLARLLGIRKKRIDEVLDVVGLKDSAK-----------KKVKGFSLGMKQRLGIALALLGN 144 (208)
T ss_pred EecCCCccCccCcHHHHHHHHHHhcCCcHHHHHHHHHHcCCHHHHh-----------hhHhhCCHHHHHHHHHHHHHhcC
Confidence 999999887 5799999986531 224566777777776655432 33457999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 145 p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 145 PDLLILDEPTNGLDPDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred CCEEEECCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999998875 47899999999999865 9999999999999875
No 223
>cd03247 ABCC_cytochrome_bd The CYD subfamily implicated in cytochrome bd biogenesis. The CydC and CydD proteins are important for the formation of cytochrome bd terminal oxidase of E. coli and it has been proposed that they were necessary for biosynthesis of the cytochrome bd quinol oxidase and for periplasmic c-type cytochromes. CydCD were proposed to determine a heterooligomeric complex important for heme export into the periplasm or to be involved in the maintenance of the proper redox state of the periplasmic space. In Bacillus subtilius, the absence of CydCD does not affect the presence of halo-cytochrome c in the membrane and this observation suggests that CydCD proteins are not involved in the export of heme in this organism.
Probab=100.00 E-value=1.7e-41 Score=356.68 Aligned_cols=178 Identities=38% Similarity=0.681 Sum_probs=166.1
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|+.+ +.++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++... ...+|++++
T Consensus 1 i~~~~~~~~~~~~-~~~~l~~i~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~ 78 (178)
T cd03247 1 LSINNVSFSYPEQ-EQQVLKNLSLELKQGEKIALLGRSGSGKSTLLQLLTGDLKPQQGEITLDGVPVSDL-EKALSSLIS 78 (178)
T ss_pred CEEEEEEEEeCCC-CccceEEEEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCEEEECCEEHHHH-HHHHHhhEE
Confidence 5789999999743 23699999999999999999999999999999999999999999999999988766 667889999
Q ss_pred EEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 047171 1058 LVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMI 1137 (1224)
Q Consensus 1058 ~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~I 1137 (1224)
|+||+|.+|+.|++||+ ..+||||||||++||||++++|++
T Consensus 79 ~~~q~~~~~~~tv~~~i---------------------------------------~~~LS~G~~qrv~laral~~~p~~ 119 (178)
T cd03247 79 VLNQRPYLFDTTLRNNL---------------------------------------GRRFSGGERQRLALARILLQDAPI 119 (178)
T ss_pred EEccCCeeecccHHHhh---------------------------------------cccCCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 457999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCEEEEec
Q 047171 1138 LLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1138 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~G 1196 (1224)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|++++.|
T Consensus 120 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~i~~~~ 178 (178)
T cd03247 120 VLLDEPTVGLDPITERQLLSLIFEVLKDKTLIWITHHLTGIEHMDKILFLENGKIIMQG 178 (178)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999999887789999999999999889999999999999865
No 224
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.5e-41 Score=373.06 Aligned_cols=211 Identities=27% Similarity=0.473 Sum_probs=179.6
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH-Hhcce
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK-LRSCI 1056 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~i 1056 (1224)
|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+... +++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i 77 (230)
T TIGR03410 1 LEVSNLNVYYGQ---SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGI 77 (230)
T ss_pred CEEEeEEEEeCC---eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCe
Confidence 578999999963 36999999999999999999999999999999999999999999999999998877655 47789
Q ss_pred EEEecCCCCCcc-cHHHHHccCCCCC--CHHH-HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1057 ALVSQEPTLFAG-TIRQNIVYGKEVA--TEAE-IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1057 ~~V~Qdp~LF~g-TIreNl~~~~~~~--~dee-i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
+|+||++.+|.. |++||+.++.... .+++ ..++++..+ +++........+||||||||++||||++
T Consensus 78 ~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~l~~~~----------~l~~~~~~~~~~LS~G~~qrv~la~al~ 147 (230)
T TIGR03410 78 AYVPQGREIFPRLTVEENLLTGLAALPRRSRKIPDEIYELFP----------VLKEMLGRRGGDLSGGQQQQLAIARALV 147 (230)
T ss_pred EEeccCCcccCCCcHHHHHHHHHHhcCcchHHHHHHHHHHHH----------hHHHHhhCChhhCCHHHHHHHHHHHHHh
Confidence 999999999985 9999998753221 1111 122222211 2233344556689999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
++|++|||||||++||+.+.+.+.+.|.+..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 148 ~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~ 219 (230)
T TIGR03410 148 TRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDEL 219 (230)
T ss_pred cCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHc
Confidence 99999999999999999999999999998764 7899999999999986 999999999999999999997
No 225
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-41 Score=376.44 Aligned_cols=226 Identities=28% Similarity=0.460 Sum_probs=188.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCCC--CH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKSY--NL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~~ 1049 (1224)
.|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~ 79 (250)
T PRK14262 3 IIEIENFSAYYGE---KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDV 79 (250)
T ss_pred eEEEEeeEEEeCC---ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhH
Confidence 4899999999963 4699999999999999999999999999999999999984 899999999988653 34
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC---CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE---VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~---~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||+|.+|..|++||+.++.. ... ++++.++++..++.+.+ +........+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~Gq~ 152 (250)
T PRK14262 80 TEYRKKVGMVFQKPTPFPMSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEV-------KSELNKPGTRLSGGQQ 152 (250)
T ss_pred HHhhhhEEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchh-------HHHHhCChhhcCHHHH
Confidence 567889999999999999999999986421 111 22344455555543322 1234566778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tili~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14262 153 QRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSENYTIVIVTHNIGQAIRIADYIAFMYRGELIEYGPTREI 232 (250)
T ss_pred HHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHH
Confidence 9999999999999999999999999999999999999988778999999999998765 999999999999999999999
Q ss_pred hhcCCCchhHHH
Q 047171 1202 LSMGNGGAYYSL 1213 (1224)
Q Consensus 1202 l~~~~~g~y~~l 1213 (1224)
.+. +...|.+.
T Consensus 233 ~~~-~~~~~~~~ 243 (250)
T PRK14262 233 VER-PKNKLTEE 243 (250)
T ss_pred HhC-CCChHHHH
Confidence 764 23334443
No 226
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=4.6e-41 Score=371.60 Aligned_cols=217 Identities=32% Similarity=0.522 Sum_probs=183.5
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCC--CHHHHhcc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSY--NLRKLRSC 1055 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~--~~~~lR~~ 1055 (1224)
|+++|++++|++ .++|+|+||++++||++||+|+||||||||+++|+|+++|++|+|.+||.++... +...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 78 (240)
T PRK09493 2 IEFKNVSKHFGP---TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQE 78 (240)
T ss_pred EEEEeEEEEECC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhc
Confidence 689999999963 4599999999999999999999999999999999999999999999999998764 34567889
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCC---CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKE---VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAV 1131 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~---~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAl 1131 (1224)
++|+||++.+|. .|++||+.++.. ..+.++.++ .+.+.+..+ |++.........||||||||++||||+
T Consensus 79 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al 151 (240)
T PRK09493 79 AGMVFQQFYLFPHLTALENVMFGPLRVRGASKEEAEK-----QARELLAKV--GLAERAHHYPSELSGGQQQRVAIARAL 151 (240)
T ss_pred eEEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHH-----HHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHH
Confidence 999999998886 699999987521 112222211 122333333 455555566678999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1132 LKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1132 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
+++|++|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 152 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 152 AVKPKLMLFDEPTSALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 99999999999999999999999999998875 47899999999999865 999999999999999999998764
No 227
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-41 Score=378.97 Aligned_cols=213 Identities=29% Similarity=0.478 Sum_probs=185.0
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.+.+...+|+.+
T Consensus 11 ~l~i~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 87 (265)
T PRK10575 11 TFALRNVSFRVPG---RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKV 87 (265)
T ss_pred eEEEeeEEEEECC---EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhhe
Confidence 5999999999963 4699999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEecCCCCCc-ccHHHHHccCCCC----------CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKEV----------ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~~----------~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
+|+||++.++. .|++||+.++... ..++++.++++..++.+++. ....+||||||||+
T Consensus 88 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LSgG~~qrv 156 (265)
T PRK10575 88 AYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAH-----------RLVDSLSGGERQRA 156 (265)
T ss_pred EEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhc-----------CCcccCCHHHHHHH
Confidence 99999987665 5999999875210 11234555666665544332 33357999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
+||||++.+|+||||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~ 236 (265)
T PRK10575 157 WIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELM 236 (265)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhc
Confidence 99999999999999999999999999999999999875 27899999999999865 9999999999999999999986
Q ss_pred h
Q 047171 1203 S 1203 (1224)
Q Consensus 1203 ~ 1203 (1224)
.
T Consensus 237 ~ 237 (265)
T PRK10575 237 R 237 (265)
T ss_pred C
Confidence 5
No 228
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-41 Score=375.14 Aligned_cols=219 Identities=24% Similarity=0.436 Sum_probs=185.1
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC--C---CCceEEECCccCCCC--C
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD--P---QSGSVMVDERNIKSY--N 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~~--~ 1048 (1224)
+.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++ | ++|+|.+||.++... +
T Consensus 3 ~~l~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~ 79 (252)
T PRK14256 3 NKVKLEQLNVHFGK---NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVD 79 (252)
T ss_pred cEEEEEEEEEEeCC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCC
Confidence 57999999999963 459999999999999999999999999999999999986 4 589999999998643 4
Q ss_pred HHHHhcceEEEecCCCCCc-ccHHHHHccCCC--C-CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1049 LRKLRSCIALVSQEPTLFA-GTIRQNIVYGKE--V-ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~~--~-~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
...+|++++|+||++.+|. .|++||+.++.. . .+. +++.++++..++.+++. ......+.+||||
T Consensus 80 ~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LS~G 152 (252)
T PRK14256 80 PVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVK-------DRLKSNAMELSGG 152 (252)
T ss_pred hHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhh-------HHhhCCcCcCCHH
Confidence 5568899999999999987 699999986421 1 122 23444444544433221 2234556789999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChh
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQS 1199 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~ 1199 (1224)
||||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++
T Consensus 153 ~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 232 (252)
T PRK14256 153 QQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETK 232 (252)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999999998778899999999999865 9999999999999999999
Q ss_pred HHhhc
Q 047171 1200 SLLSM 1204 (1224)
Q Consensus 1200 eLl~~ 1204 (1224)
++...
T Consensus 233 ~~~~~ 237 (252)
T PRK14256 233 KIFTT 237 (252)
T ss_pred HHHhC
Confidence 99865
No 229
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.2e-41 Score=378.73 Aligned_cols=214 Identities=32% Similarity=0.536 Sum_probs=183.4
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC-HHHHhcce
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN-LRKLRSCI 1056 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~-~~~lR~~i 1056 (1224)
|+++|++++|+. +.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++...+ ...+++.+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i 79 (274)
T PRK13644 2 IRLENVSYSYPD--GTPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLV 79 (274)
T ss_pred EEEEEEEEEcCC--CCceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhhe
Confidence 789999999963 245999999999999999999999999999999999999999999999999998765 46788899
Q ss_pred EEEecCCC--CCcccHHHHHccCCCC--CCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEPT--LFAGTIRQNIVYGKEV--ATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp~--LF~gTIreNl~~~~~~--~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+|+||+|. +++.|++|||.++... .+.+ ++.++++..+ ++......+..||||||||++||
T Consensus 80 ~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LS~G~~qrv~la 148 (274)
T PRK13644 80 GIVFQNPETQFVGRTVEEDLAFGPENLCLPPIEIRKRVDRALAEIG-----------LEKYRHRSPKTLSGGQGQCVALA 148 (274)
T ss_pred EEEEEChhhhcccchHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCC-----------CHHHhcCCcccCCHHHHHHHHHH
Confidence 99999985 5778999999876321 2222 2333333333 33334455678999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||++.+|+||||||||++||+.+...+.+.|+++. +|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 149 ral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 149 GILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99999999999999999999999999999998865 48899999999999988999999999999999999998653
No 230
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.2e-41 Score=370.82 Aligned_cols=208 Identities=37% Similarity=0.517 Sum_probs=172.0
Q ss_pred EEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH----H
Q 047171 978 IELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK----L 1052 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~----l 1052 (1224)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... .
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 80 (218)
T cd03255 1 IELKNLSKTYGGGGEKVQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFR 80 (218)
T ss_pred CeEeeeEEEecCCCcceeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHH
Confidence 57899999996421 146999999999999999999999999999999999999999999999999998776432 4
Q ss_pred hcceEEEecCCCCCcc-cHHHHHccCCCC--CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1053 RSCIALVSQEPTLFAG-TIRQNIVYGKEV--ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1053 R~~i~~V~Qdp~LF~g-TIreNl~~~~~~--~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
|++++|+||++.+|.+ |++||+.++... .+.++.. ..+.+.+..+ |++........+||||||||++|||
T Consensus 81 ~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~ 153 (218)
T cd03255 81 RRHIGFVFQSFNLLPDLTALENVELPLLLAGVPKKERR-----ERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIAR 153 (218)
T ss_pred hhcEEEEeeccccCCCCcHHHHHHHHHhhcCCCHHHHH-----HHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHH
Confidence 6789999999999976 999999875321 1111111 1122333332 4444445566789999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEE
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQKADNIVVIKNGKV 1192 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~aD~I~vl~~G~I 1192 (1224)
|++++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||+|++|++|++
T Consensus 154 al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 154 ALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred HHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 99999999999999999999999999999998764 7899999999999888999999999974
No 231
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.7e-41 Score=375.94 Aligned_cols=215 Identities=31% Similarity=0.506 Sum_probs=182.7
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCC--------
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSY-------- 1047 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~-------- 1047 (1224)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...
T Consensus 4 ~~l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~ 80 (257)
T PRK10619 4 NKLNVIDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLK 80 (257)
T ss_pred ccEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccc
Confidence 46999999999963 4699999999999999999999999999999999999999999999999988642
Q ss_pred -----CHHHHhcceEEEecCCCCCc-ccHHHHHccCCC---CCCH----HHHHHHHHHHhHHHHHHhccccccccc-CCC
Q 047171 1048 -----NLRKLRSCIALVSQEPTLFA-GTIRQNIVYGKE---VATE----AEIRKAAVLANAHEFISSTEDGYDTYC-GER 1113 (1224)
Q Consensus 1048 -----~~~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~~---~~~d----eei~~al~~a~l~~~I~~lp~gldt~v-ge~ 1113 (1224)
....+|++++||||++.+|. .|++||+.++.. .... +++.++++.. |++... ...
T Consensus 81 ~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~ 149 (257)
T PRK10619 81 VADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKV-----------GIDERAQGKY 149 (257)
T ss_pred cccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHc-----------CCChhhhhCC
Confidence 13567889999999999997 599999976420 1122 2233333333 333332 455
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 047171 1114 GVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGK 1191 (1224)
Q Consensus 1114 G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~ 1191 (1224)
...||||||||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||||++|++|+
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~ 229 (257)
T PRK10619 150 PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGK 229 (257)
T ss_pred cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCE
Confidence 67899999999999999999999999999999999999999999999875 48999999999999986 99999999999
Q ss_pred EEEecChhHHhhc
Q 047171 1192 VVEQGTQSSLLSM 1204 (1224)
Q Consensus 1192 Ive~Gt~~eLl~~ 1204 (1224)
+++.|+++++...
T Consensus 230 i~~~~~~~~~~~~ 242 (257)
T PRK10619 230 IEEEGAPEQLFGN 242 (257)
T ss_pred EEEeCCHHHhhhC
Confidence 9999999999764
No 232
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-41 Score=376.03 Aligned_cols=218 Identities=30% Similarity=0.480 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcc---cCC--CCceEEECCccCCCC--CH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERF---YDP--QSGSVMVDERNIKSY--NL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl---~~p--~~G~I~idG~di~~~--~~ 1049 (1224)
.|+++|++++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+ ++| ++|+|.+||.++... +.
T Consensus 3 ~l~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 79 (250)
T PRK14245 3 KIDARDVNFWYGD---FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQV 79 (250)
T ss_pred EEEEEEEEEEECC---EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccH
Confidence 5899999999963 4599999999999999999999999999999999997 454 589999999998754 34
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC--CC-C----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VA-T----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~-~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||++.+|..|++||+.++.. .. . +++++++++..++.+++ ++.....+.+||||||
T Consensus 80 ~~~~~~i~~v~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 152 (250)
T PRK14245 80 DELRKNVGMVFQRPNPFPKSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEV-------KDKLKESAFALSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcch-------hhhhhCCcccCCHHHH
Confidence 678899999999999999999999986421 11 1 12334444444433222 2334566778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~ 232 (250)
T PRK14245 153 QRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKI 232 (250)
T ss_pred HHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999998778999999999999865 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
.+.
T Consensus 233 ~~~ 235 (250)
T PRK14245 233 FTN 235 (250)
T ss_pred hcC
Confidence 865
No 233
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-41 Score=370.77 Aligned_cols=218 Identities=26% Similarity=0.423 Sum_probs=181.7
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH-Hhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK-LRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~ 1055 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+... +|+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 81 (237)
T PRK11614 5 MLSFDKVSAHYGK---IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREA 81 (237)
T ss_pred EEEEEeEEEeeCC---ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhC
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998887654 6788
Q ss_pred eEEEecCCCCCcc-cHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1056 IALVSQEPTLFAG-TIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1056 i~~V~Qdp~LF~g-TIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
++|+||++.+|.+ |++||+.++....+.++..+.+ .+.+..++. ++.........||||||||++||||++++
T Consensus 82 i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~l~~~~~-l~~~~~~~~~~LS~G~~qrl~la~al~~~ 155 (237)
T PRK11614 82 VAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERI-----KWVYELFPR-LHERRIQRAGTMSGGEQQMLAIGRALMSQ 155 (237)
T ss_pred EEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHH-----HHHHHHHHH-HHHHHhCchhhCCHHHHHHHHHHHHHHhC
Confidence 9999999999984 9999998753222222222211 112222211 11122345568999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
|+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 156 p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 156 PRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred CCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 99999999999999999999999998875 48999999999998755 99999999999999999999975
No 234
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1e-40 Score=371.96 Aligned_cols=228 Identities=35% Similarity=0.542 Sum_probs=204.7
Q ss_pred cccccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHh
Q 047171 323 YLRGEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLR 390 (1224)
Q Consensus 323 ~~~~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 390 (1224)
...+.|+++|++++|++. .+++.++|+|+||||||||+++|+|+++|++|+|.++|+++.+.+...++
T Consensus 15 ~~~~~i~~~~l~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~ 94 (257)
T cd03288 15 GLGGEIKIHDLCVRYENNLKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPLHTLR 94 (257)
T ss_pred cCCceEEEEEEEEEeCCCCCcceeEEEEEEcCCCEEEEECCCCCCHHHHHHHHHcccCCCCCeEEECCEEhhhCCHHHHh
Confidence 346789999999999752 25679999999999999999999999999999999999999988888889
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
+.|+||+|+|.+|++|++||+..... ...+++.++.+..++++++..+|.|+++.+++.+.+||||||||++||||+++
T Consensus 95 ~~i~~v~q~~~l~~~tv~~nl~~~~~-~~~~~~~~~l~~~~l~~~~~~~~~~l~~~~~~~~~~LS~G~~qrl~laral~~ 173 (257)
T cd03288 95 SRLSIILQDPILFSGSIRFNLDPECK-CTDDRLWEALEIAQLKNMVKSLPGGLDAVVTEGGENFSVGQRQLFCLARAFVR 173 (257)
T ss_pred hhEEEECCCCcccccHHHHhcCcCCC-CCHHHHHHHHHHhCcHHHHhhcccccCcEeccCCCcCCHHHHHHHHHHHHHhc
Confidence 99999999999999999999976432 23556777778888999999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHH
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYS 550 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~ 550 (1224)
+|++|||||||++||++++..+.+.++++.+++|+|++||+++.+..||+|++|++|++++.|+++++.+.. .+.|+
T Consensus 174 ~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~~---~~~~~ 250 (257)
T cd03288 174 KSSILIMDEATASIDMATENILQKVVMTAFADRTVVTIAHRVSTILDADLVLVLSRGILVECDTPENLLAQE---DGVFA 250 (257)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHhcCCCEEEEEecChHHHHhCCEEEEEECCEEEEeCCHHHHHhcc---chHHH
Confidence 999999999999999999999999998877789999999999999889999999999999999999998752 45566
Q ss_pred HHHH
Q 047171 551 KMVQ 554 (1224)
Q Consensus 551 ~~~~ 554 (1224)
+++.
T Consensus 251 ~~~~ 254 (257)
T cd03288 251 SLVR 254 (257)
T ss_pred HHHh
Confidence 6554
No 235
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.4e-41 Score=373.36 Aligned_cols=222 Identities=23% Similarity=0.388 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH-Hhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK-LRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~ 1055 (1224)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+... .|+.
T Consensus 2 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 78 (242)
T TIGR03411 2 ILYLEGLSVSFDG---FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAG 78 (242)
T ss_pred eEEEEeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcC
Confidence 3789999999963 46999999999999999999999999999999999999999999999999998877665 4567
Q ss_pred eEEEecCCCCCcc-cHHHHHccCCCCCCH--HH---HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1056 IALVSQEPTLFAG-TIRQNIVYGKEVATE--AE---IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1056 i~~V~Qdp~LF~g-TIreNl~~~~~~~~d--ee---i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
++|+||++.+|.+ |++||+.++...... .. .........+.+++..+ |++........+||||||||++|||
T Consensus 79 i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~lar 156 (242)
T TIGR03411 79 IGRKFQKPTVFENLTVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGM 156 (242)
T ss_pred eeEeccccccCCCCCHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHH
Confidence 9999999999986 999999875321000 00 00000111223334333 4555556667789999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
|++++|++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|+++++|+++++..
T Consensus 157 al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 157 LLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred HHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999999999999999999998778999999999999976 99999999999999999999865
No 236
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.6e-41 Score=377.84 Aligned_cols=224 Identities=25% Similarity=0.440 Sum_probs=186.3
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHH---HHh
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLR---KLR 1053 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~---~lR 1053 (1224)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+.. .+|
T Consensus 7 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 83 (269)
T PRK11831 7 LVDMRGVSFTRGN---RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVR 83 (269)
T ss_pred eEEEeCeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHh
Confidence 5899999999963 4699999999999999999999999999999999999999999999999998876543 457
Q ss_pred cceEEEecCCCCCcc-cHHHHHccCCC---CCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1054 SCIALVSQEPTLFAG-TIRQNIVYGKE---VATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~g-TIreNl~~~~~---~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
++++|+||++.+|.+ |++||+.++.. ..+.+ .+.++++.. |++........+||||||||+
T Consensus 84 ~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~-----------gl~~~~~~~~~~LSgGq~qrv 152 (269)
T PRK11831 84 KRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAV-----------GLRGAAKLMPSELSGGMARRA 152 (269)
T ss_pred hcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHc-----------CChhhhhCChhhCCHHHHHHH
Confidence 889999999999985 99999986421 11222 222233333 233333344568999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
+||||++++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++
T Consensus 153 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 153 ALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQ 232 (269)
T ss_pred HHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999876 9999999999999999999998
Q ss_pred hcCCCchhHHHHH
Q 047171 1203 SMGNGGAYYSLIK 1215 (1224)
Q Consensus 1203 ~~~~~g~y~~l~~ 1215 (1224)
+. +...+..++.
T Consensus 233 ~~-~~~~~~~~~~ 244 (269)
T PRK11831 233 AN-PDPRVRQFLD 244 (269)
T ss_pred cC-CcHHHHHHHH
Confidence 64 3444555554
No 237
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-41 Score=375.22 Aligned_cols=218 Identities=28% Similarity=0.440 Sum_probs=187.3
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCC--CCCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIK--SYNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~--~~~~ 1049 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++. ..+.
T Consensus 10 ~l~i~~v~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~ 86 (264)
T PRK14243 10 VLRTENLNVYYGS---FLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDP 86 (264)
T ss_pred EEEEeeeEEEECC---EEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccCh
Confidence 5999999999963 369999999999999999999999999999999999986 37999999999885 3456
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCCC--C---CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKEV--A---TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~--~---~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQR 1124 (1224)
..+|++++|+||++.+|+.|++||+.++... . .++++.++++.+++.+++. ......+.+||||||||
T Consensus 87 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~qr 159 (264)
T PRK14243 87 VEVRRRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVK-------DKLKQSGLSLSGGQQQR 159 (264)
T ss_pred HHHhhhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHH-------HHhcCCcccCCHHHHHH
Confidence 6788999999999999989999999875321 1 1234455566666654442 22345667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEEE
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIK---------NGKVVE 1194 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~---------~G~Ive 1194 (1224)
++||||++++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|+ +|++++
T Consensus 160 v~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~ 239 (264)
T PRK14243 160 LCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVE 239 (264)
T ss_pred HHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEE
Confidence 99999999999999999999999999999999999998777899999999999866 99999998 899999
Q ss_pred ecChhHHhhc
Q 047171 1195 QGTQSSLLSM 1204 (1224)
Q Consensus 1195 ~Gt~~eLl~~ 1204 (1224)
.|+++|+.+.
T Consensus 240 ~~~~~~~~~~ 249 (264)
T PRK14243 240 FDRTEKIFNS 249 (264)
T ss_pred eCCHHHHHhC
Confidence 9999999865
No 238
>cd03253 ABCC_ATM1_transporter ATM1 is an ABC transporter that is expressed in the mitochondria. Although the specific function of ATM1 is unknown, its disruption results in the accumulation of excess mitochondrial iron, loss of mitochondrial cytochromes, oxidative damage to mitochondrial DNA, and decreased levels of cytosolic heme proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.4e-41 Score=369.28 Aligned_cols=218 Identities=53% Similarity=0.851 Sum_probs=195.5
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIK 408 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~ 408 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|++|++.+|+.|++
T Consensus 16 ~l~~i~~~i~---~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~v~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~ 92 (236)
T cd03253 16 VLKDVSFTIP---AGKKVAIVGPSGSGKSTILRLLFRFYDVSSGSILIDGQDIREVTLDSLRRAIGVVPQDTVLFNDTIG 92 (236)
T ss_pred eeeeeEEEEc---CCCEEEEECCCCCCHHHHHHHHhcccCCCCCEEEECCEEhhhCCHHHHHhhEEEECCCChhhcchHH
Confidence 4555555543 5679999999999999999999999999999999999999888888888899999999999999999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHH
Q 047171 409 ENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAES 488 (1224)
Q Consensus 409 ~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~ 488 (1224)
||+.++.+..+.+++.+.++..++.+.+..+|.|+++.++.++.+||||||||++|||||+.+|++|||||||++||+++
T Consensus 93 ~nl~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~LS~G~~~rl~la~aL~~~p~llllDEP~~~LD~~~ 172 (236)
T cd03253 93 YNIRYGRPDATDEEVIEAAKAAQIHDKIMRFPDGYDTIVGERGLKLSGGEKQRVAIARAILKNPPILLLDEATSALDTHT 172 (236)
T ss_pred HHHhhcCCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 99999866556666777778888889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhhccCCCchHHHHH
Q 047171 489 ERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQMNNGEGGAYSKMV 553 (1224)
Q Consensus 489 ~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~~~~~~~~y~~~~ 553 (1224)
...+.+.|.++.+|+|+|++||+++.+..||++++|++|++++.|+.+++... ...|++.+
T Consensus 173 ~~~l~~~l~~~~~~~tiii~sh~~~~~~~~d~~~~l~~g~i~~~~~~~~~~~~----~~~~~~~~ 233 (236)
T cd03253 173 EREIQAALRDVSKGRTTIVIAHRLSTIVNADKIIVLKDGRIVERGTHEELLAK----GGLYAEMW 233 (236)
T ss_pred HHHHHHHHHHhcCCCEEEEEcCCHHHHHhCCEEEEEECCEEEeeCCHHHHhhc----ccHHHHHH
Confidence 99999999887668999999999999988999999999999999999988764 44454443
No 239
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-41 Score=375.16 Aligned_cols=218 Identities=28% Similarity=0.468 Sum_probs=184.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1049 (1224)
.++++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++.. .+.
T Consensus 24 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 100 (271)
T PRK14238 24 VFDTQNLNLWYGE---DHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSV 100 (271)
T ss_pred EEEEeeeEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccH
Confidence 6999999999963 359999999999999999999999999999999999987 699999999998853 455
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC--CCCHH-----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VATEA-----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~~de-----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||+|.+|..|++||+.++.. ..+++ .+.++++..++. +++.......+.+||||||
T Consensus 101 ~~~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~l~~~~~~~~~~LSgGe~ 173 (271)
T PRK14238 101 EELRTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIW-------DELKDRLHDNAYGLSGGQQ 173 (271)
T ss_pred HHHhhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCc-------chHHHHHhcCcccCCHHHH
Confidence 678899999999999999999999986421 12221 122222222221 1233344566778999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 174 qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~ 253 (271)
T PRK14238 174 QRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKI 253 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999865 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
...
T Consensus 254 ~~~ 256 (271)
T PRK14238 254 FSN 256 (271)
T ss_pred HcC
Confidence 865
No 240
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.2e-41 Score=368.44 Aligned_cols=210 Identities=54% Similarity=0.884 Sum_probs=193.0
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIK 408 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~ 408 (1224)
.++|++|+.+ ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|++|++.+|+.|++
T Consensus 17 ~l~~i~~~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~ 93 (234)
T cd03251 17 VLRDISLDIP---AGETVALVGPSGSGKSTLVNLIPRFYDVDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFNDTVA 93 (234)
T ss_pred ceeeeeEEEc---CCCEEEEECCCCCCHHHHHHHHhccccCCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeeccccHH
Confidence 4677777764 5679999999999999999999999999999999999999888877888899999999999999999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHH
Q 047171 409 ENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAES 488 (1224)
Q Consensus 409 ~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~ 488 (1224)
||+.++.+....+++.+.++..+++++++.+|.|+++..+.++.+||||||||++|||||+.+|+++||||||++||+.+
T Consensus 94 enl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~ 173 (234)
T cd03251 94 ENIAYGRPGATREEVEEAARAANAHEFIMELPEGYDTVIGERGVKLSGGQRQRIAIARALLKDPPILILDEATSALDTES 173 (234)
T ss_pred HHhhccCCCCCHHHHHHHHHHcCcHHHHHhcccCcceeeccCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHH
Confidence 99999865555566777777788899999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 489 ERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 489 ~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
...+.+.|.++.+++|+|++||+++.+..||++++|++|++++.|+.+++...
T Consensus 174 ~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 226 (234)
T cd03251 174 ERLVQAALERLMKNRTTFVIAHRLSTIENADRIVVLEDGKIVERGTHEELLAQ 226 (234)
T ss_pred HHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEecCCeEeeeCCHHHHHHc
Confidence 99999999988789999999999999988999999999999999999998765
No 241
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1e-40 Score=366.49 Aligned_cols=215 Identities=54% Similarity=0.878 Sum_probs=195.1
Q ss_pred cEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEE
Q 047171 327 EIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGL 395 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 395 (1224)
+|+++|++++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+|+.++|
T Consensus 2 ~l~~~~l~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 81 (229)
T cd03254 2 EIEFENVNFSYDEKKPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRDISRKSLRSMIGV 81 (229)
T ss_pred eEEEEEEEEecCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCCEEEECCEeHHHcCHHHHhhhEEE
Confidence 46677777777531 2566999999999999999999999999999999999999988888888899999
Q ss_pred ecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 047171 396 VNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKIL 475 (1224)
Q Consensus 396 v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~il 475 (1224)
++|++.+|++|++||+.++.+....+++.++++..++.++++.+|.|+++.++....+||||||||++|||||+.+|++|
T Consensus 82 ~~q~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~ll 161 (229)
T cd03254 82 VLQDTFLFSGTIMENIRLGRPNATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKIL 161 (229)
T ss_pred ecCCchhhhhHHHHHHhccCCCCCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999999999999886655566777788888899999999999999999999999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 476 LLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 476 ilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||||++||+.+.+.+.+.+.++.+++|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 162 llDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~~ 227 (229)
T cd03254 162 ILDEATSNIDTETEKLIQEALEKLMKGRTSIIIAHRLSTIKNADKILVLDDGKIIEEGTHDELLAK 227 (229)
T ss_pred EEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHhhCCEEEEEeCCeEEEeCCHHHHHhh
Confidence 999999999999999999999988778999999999999988999999999999999998887654
No 242
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-41 Score=376.14 Aligned_cols=220 Identities=30% Similarity=0.515 Sum_probs=188.0
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+++.++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (255)
T PRK11231 3 LRTENLTVGYGT---KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLA 79 (255)
T ss_pred EEEEeEEEEECC---EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEecCCCCCcc-cHHHHHccCCCC-------C---CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHH
Q 047171 1058 LVSQEPTLFAG-TIRQNIVYGKEV-------A---TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1058 ~V~Qdp~LF~g-TIreNl~~~~~~-------~---~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRla 1126 (1224)
|+||++.+|.+ |+.||+.++... . .++++.++++..++.++ .......||||||||++
T Consensus 80 ~~~q~~~~~~~~tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~ 148 (255)
T PRK11231 80 LLPQHHLTPEGITVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHL-----------ADRRLTDLSGGQRQRAF 148 (255)
T ss_pred EecccCCCCCCccHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHH-----------HcCCcccCCHHHHHHHH
Confidence 99999998876 999999875210 0 12234444544444332 33455689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||||++++|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 149 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 228 (255)
T PRK11231 149 LAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMTP 228 (255)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcCH
Confidence 9999999999999999999999999999999998875 47899999999999865 999999999999999999998652
Q ss_pred CCCchhHHHH
Q 047171 1205 GNGGAYYSLI 1214 (1224)
Q Consensus 1205 ~~~g~y~~l~ 1214 (1224)
..+.+.+
T Consensus 229 ---~~~~~~~ 235 (255)
T PRK11231 229 ---GLLRTVF 235 (255)
T ss_pred ---HHHHHHh
Confidence 3445554
No 243
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=4.7e-41 Score=376.39 Aligned_cols=229 Identities=31% Similarity=0.458 Sum_probs=185.0
Q ss_pred EEEEEEEEECCCC------CCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH
Q 047171 978 IELKNVFFSYPSR------PDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK 1051 (1224)
Q Consensus 978 I~~~~vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~ 1051 (1224)
|+++||+++|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~ 82 (265)
T TIGR02769 3 LEVRDVTHTYRTGGLFGAKQRAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQ 82 (265)
T ss_pred EEEEeEEEEeccCccccccCceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHH
Confidence 7899999999632 1356999999999999999999999999999999999999999999999999998776543
Q ss_pred ---HhcceEEEecCCC--CC-cccHHHHHccCCC---CCCHHHHHHHHHHHhHHHHHHhcccccc-cccCCCCCCCChHH
Q 047171 1052 ---LRSCIALVSQEPT--LF-AGTIRQNIVYGKE---VATEAEIRKAAVLANAHEFISSTEDGYD-TYCGERGVQLSGGQ 1121 (1224)
Q Consensus 1052 ---lR~~i~~V~Qdp~--LF-~gTIreNl~~~~~---~~~deei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSGGQ 1121 (1224)
+|+.++|+||+|. ++ ..|++||+.++.. ....++.. ..+.++++.+ |++ ......+.+|||||
T Consensus 83 ~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~~LSgGe 155 (265)
T TIGR02769 83 RRAFRRDVQLVFQDSPSAVNPRMTVRQIIGEPLRHLTSLDESEQK-----ARIAELLDMV--GLRSEDADKLPRQLSGGQ 155 (265)
T ss_pred HHHHhhceEEEecChhhhcCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCChhhhhCChhhCCHHH
Confidence 6788999999983 44 4799999964311 11111111 1122333332 343 23455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 047171 1122 KQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQ 1198 (1224)
Q Consensus 1122 rQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~ 1198 (1224)
|||++||||++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||++++|++|++++.|++
T Consensus 156 ~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~ 235 (265)
T TIGR02769 156 LQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDV 235 (265)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCH
Confidence 9999999999999999999999999999999999999998753 7899999999999975 999999999999999999
Q ss_pred hHHhhcCCCchhHHHH
Q 047171 1199 SSLLSMGNGGAYYSLI 1214 (1224)
Q Consensus 1199 ~eLl~~~~~g~y~~l~ 1214 (1224)
++++.. .+..+..+.
T Consensus 236 ~~~~~~-~~~~~~~~~ 250 (265)
T TIGR02769 236 AQLLSF-KHPAGRNLQ 250 (265)
T ss_pred HHHcCC-CCHHHHHHH
Confidence 999874 234444444
No 244
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-41 Score=375.09 Aligned_cols=218 Identities=28% Similarity=0.472 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCCCC-HH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKSYN-LR 1050 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~~-~~ 1050 (1224)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.+.+ ..
T Consensus 21 ~l~i~nl~~~~~~---~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 97 (276)
T PRK14271 21 AMAAVNLTLGFAG---KTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVL 97 (276)
T ss_pred EEEEeeEEEEECC---EEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhH
Confidence 5899999999963 4699999999999999999999999999999999999986 6999999999987663 45
Q ss_pred HHhcceEEEecCCCCCcccHHHHHccCCC---CCCHHHHHHH----HHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1051 KLRSCIALVSQEPTLFAGTIRQNIVYGKE---VATEAEIRKA----AVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp~LF~gTIreNl~~~~~---~~~deei~~a----l~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
.+|++++|+||+|.+|+.|+++|+.++.. ..++++..+. ++..++ +..+++.....+.+|||||||
T Consensus 98 ~~~~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~l~~~~~~LSgGq~q 170 (276)
T PRK14271 98 EFRRRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGL-------WDAVKDRLSDSPFRLSGGQQQ 170 (276)
T ss_pred HHhhheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCC-------CchhhhHhhCCcccCCHHHHH
Confidence 67899999999999999999999987531 1244443322 222222 222223455677889999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
|++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 171 rl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~ 250 (276)
T PRK14271 171 LLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLF 250 (276)
T ss_pred HHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988767899999999999866 9999999999999999999998
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
+.
T Consensus 251 ~~ 252 (276)
T PRK14271 251 SS 252 (276)
T ss_pred hC
Confidence 75
No 245
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=3.4e-41 Score=368.10 Aligned_cols=209 Identities=29% Similarity=0.493 Sum_probs=172.6
Q ss_pred EEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH---Hh
Q 047171 978 IELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK---LR 1053 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~---lR 1053 (1224)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++...+... +|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (221)
T TIGR02211 2 LKCENLGKRYQEGKLDTRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLR 81 (221)
T ss_pred EEEEeeeEEccCCCcceEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHH
Confidence 78999999996421 246999999999999999999999999999999999999999999999999998877644 34
Q ss_pred -cceEEEecCCCCCc-ccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1054 -SCIALVSQEPTLFA-GTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1054 -~~i~~V~Qdp~LF~-gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
++++|+||++.+|. .|++||+.++.. ..+.++..+ .+.+++..+ |++.........||||||||++|||
T Consensus 82 ~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lar 154 (221)
T TIGR02211 82 NKKLGFIYQFHHLLPDFTALENVAMPLLIGKKSVKEAKE-----RAYEMLEKV--GLEHRINHRPSELSGGERQRVAIAR 154 (221)
T ss_pred HhcEEEEecccccCCCCcHHHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHH
Confidence 68999999999885 699999986421 112111111 112233222 4444445556789999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEeCCEEE
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQKADNIVVIKNGKVV 1193 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~aD~I~vl~~G~Iv 1193 (1224)
|++++|+||||||||++||+++.+.+.+.|+++. .++|+|+|||+++.+..||+|++|++|+++
T Consensus 155 al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 155 ALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred HHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999999999999999999999875 378999999999999889999999999986
No 246
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-41 Score=377.94 Aligned_cols=220 Identities=32% Similarity=0.525 Sum_probs=183.2
Q ss_pred EEEEEEEEECCCCC--CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCC----CHHH
Q 047171 978 IELKNVFFSYPSRP--DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSY----NLRK 1051 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~~~~ 1051 (1224)
|+++||+++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +...
T Consensus 3 l~~~~l~~~~~~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~ 82 (280)
T PRK13649 3 INLQNVSYTYQAGTPFEGRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQ 82 (280)
T ss_pred EEEEEEEEEcCCCCccccceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHH
Confidence 78999999997421 13699999999999999999999999999999999999999999999999998764 3567
Q ss_pred HhcceEEEecCC--CCCcccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccc-cccCCCCCCCChHHHHHHH
Q 047171 1052 LRSCIALVSQEP--TLFAGTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYD-TYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1052 lR~~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSGGQrQRla 1126 (1224)
+|+.|+|+||+| .+|+.|++||+.++.. ..+.++..+.+ .+++..+ |++ ........+||||||||++
T Consensus 83 ~~~~i~~~~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~ 155 (280)
T PRK13649 83 IRKKVGLVFQFPESQLFEETVLKDVAFGPQNFGVSQEEAEALA-----REKLALV--GISESLFEKNPFELSGGQMRRVA 155 (280)
T ss_pred HHhheEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHH-----HHHHHHc--CCChhhhhCCcccCCHHHHHHHH
Confidence 889999999998 6888999999986521 12333332211 2222222 343 2234556789999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||||++++|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 156 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 156 IAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred HHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999999875 47899999999999865 999999999999999999998653
No 247
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.8e-41 Score=368.24 Aligned_cols=205 Identities=34% Similarity=0.481 Sum_probs=172.6
Q ss_pred EEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 978 IELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
|+++|++++|++.. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. +++++
T Consensus 1 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i 75 (220)
T cd03293 1 LEVRNVSKTYGGGGGAVTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDR 75 (220)
T ss_pred CeEEEEEEEcCCCCcceEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcE
Confidence 47899999996311 1469999999999999999999999999999999999999999999999998763 46789
Q ss_pred EEEecCCCCCc-ccHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+||||+|.+|. .|++||+.++.. ..+ ++++.++++..++.++ ......+||||||||++|||
T Consensus 76 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~la~ 144 (220)
T cd03293 76 GYVFQQDALLPWLTVLDNVALGLELQGVPKAEARERAEELLELVGLSGF-----------ENAYPHQLSGGMRQRVALAR 144 (220)
T ss_pred EEEecccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhh-----------hhCCcccCCHHHHHHHHHHH
Confidence 99999999987 799999986521 111 2334444444444333 33444679999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEe--CCEEEEecCh
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIK--NGKVVEQGTQ 1198 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~--~G~Ive~Gt~ 1198 (1224)
||+++|++|||||||++||+.+.+.+.+.|++.. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 145 al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 145 ALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999999999999999999999999874 37899999999998765 99999999 7999998864
No 248
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-41 Score=384.55 Aligned_cols=226 Identities=27% Similarity=0.427 Sum_probs=186.1
Q ss_pred cEEEEEEEEECCCCC-------CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH
Q 047171 977 FIELKNVFFSYPSRP-------DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~-------~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~ 1049 (1224)
.|+++|++++|+.+. ..++|+||||+|++||++||||+||||||||+++|+|+++|++|+|.+||.|+.+++.
T Consensus 5 ~l~v~nl~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~~G~i~~~g~~l~~~~~ 84 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGLFKPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPTGGELYYQGQDLLKADP 84 (327)
T ss_pred eEEEeeeEEEEcCCCCccccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCCCcEEEECCEEcCcCCH
Confidence 589999999996321 2468999999999999999999999999999999999999999999999999988875
Q ss_pred H---HHhcceEEEecCCC--CCc-ccHHHHHccCC---CCCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCC
Q 047171 1050 R---KLRSCIALVSQEPT--LFA-GTIRQNIVYGK---EVATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQ 1116 (1224)
Q Consensus 1050 ~---~lR~~i~~V~Qdp~--LF~-gTIreNl~~~~---~~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~ 1116 (1224)
. .+|++|+||||+|. |+. .|+.+|+.... ...+. +++.++++.+++. +..++ ....+
T Consensus 85 ~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~------~~~~~----~~p~~ 154 (327)
T PRK11308 85 EAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLR------PEHYD----RYPHM 154 (327)
T ss_pred HHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCC------hHHhc----CCCcc
Confidence 4 56889999999994 554 58998886321 11122 2344444444442 12233 34567
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 047171 1117 LSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVV 1193 (1224)
Q Consensus 1117 LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Iv 1193 (1224)
||||||||++|||||+.+|++||+||||++||..+.+.|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~adrv~vm~~G~iv 234 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLSVVEHIADEVMVMYLGRCV 234 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEE
Confidence 999999999999999999999999999999999999999999998753 7899999999999975 9999999999999
Q ss_pred EecChhHHhhcCCCchhHHH
Q 047171 1194 EQGTQSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1194 e~Gt~~eLl~~~~~g~y~~l 1213 (1224)
|.|+++++++. +...|.+.
T Consensus 235 e~g~~~~~~~~-p~hpyt~~ 253 (327)
T PRK11308 235 EKGTKEQIFNN-PRHPYTQA 253 (327)
T ss_pred EECCHHHHhcC-CCCHHHHH
Confidence 99999999986 34455543
No 249
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=2.6e-41 Score=366.85 Aligned_cols=203 Identities=31% Similarity=0.527 Sum_probs=172.4
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+.. +++++
T Consensus 1 i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~ 75 (213)
T cd03301 1 VELENVTKRFGN---VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIA 75 (213)
T ss_pred CEEEeeEEEECC---eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEE
Confidence 578999999963 3699999999999999999999999999999999999999999999999998765543 57899
Q ss_pred EEecCCCCCc-ccHHHHHccCCC--CCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKE--VATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~--~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||++.+|. .|++||+.++.. ..+.+ ++.++++..++. ........+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~~~~LS~G~~qr~~lara 144 (213)
T cd03301 76 MVFQNYALYPHMTVYDNIAFGLKLRKVPKDEIDERVREVAELLQIE-----------HLLDRKPKQLSGGQRQRVALGRA 144 (213)
T ss_pred EEecChhhccCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCH-----------HHHhCChhhCCHHHHHHHHHHHH
Confidence 9999999885 699999987521 11222 233334444443 33344556899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
++++|++|||||||++||+++.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 145 l~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 145 IVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999999999999999999999999875 37899999999999876 9999999999999876
No 250
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-41 Score=389.58 Aligned_cols=213 Identities=32% Similarity=0.533 Sum_probs=182.8
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcc
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSC 1055 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~ 1055 (1224)
..|+++|++++|++ .++|+|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.++ .|++
T Consensus 18 ~~l~l~~v~~~~~~---~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ 92 (377)
T PRK11607 18 PLLEIRNLTKSFDG---QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRP 92 (377)
T ss_pred ceEEEEeEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCC
Confidence 35999999999963 458999999999999999999999999999999999999999999999999987664 5789
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCC--CCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKE--VATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~--~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
++||+|++.+|. .|++|||.++.. ..+.. ++.++++..++.+ .......+||||||||++||
T Consensus 93 ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~-----------~~~~~~~~LSgGq~QRVaLA 161 (377)
T PRK11607 93 INMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQE-----------FAKRKPHQLSGGQRQRVALA 161 (377)
T ss_pred EEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCch-----------hhcCChhhCCHHHHHHHHHH
Confidence 999999999997 599999998742 12322 2334444444433 33345568999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|||+++|++||||||||+||..+.+.+.+.|+++. .+.|+|+|||+++.+.. ||+|++|++|++++.|+++|+..+
T Consensus 162 RAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 162 RSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 99999999999999999999999999998887764 37899999999998755 999999999999999999999876
No 251
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-41 Score=371.38 Aligned_cols=218 Identities=22% Similarity=0.424 Sum_probs=185.3
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH-Hhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK-LRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~ 1055 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++...+... +|+.
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (241)
T PRK10895 3 TLTAKNLAKAYKG---RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRG 79 (241)
T ss_pred eEEEeCcEEEeCC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhC
Confidence 3889999999963 46999999999999999999999999999999999999999999999999998877644 5789
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCC---CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKE---VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAV 1131 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~---~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAl 1131 (1224)
++|+||++.+|. .|++||+.++.. ..+.++.+ ..+.+++..+ |++.........||||||||++||||+
T Consensus 80 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral 152 (241)
T PRK10895 80 IGYLPQEASIFRRLSVYDNLMAVLQIRDDLSAEQRE-----DRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARAL 152 (241)
T ss_pred eEEeccCCcccccCcHHHHHhhhhhcccccCHHHHH-----HHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHH
Confidence 999999999887 599999987531 11222211 2233444444 455555666788999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1132 LKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1132 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
+++|++|||||||++||+.+.+.+.+.++++. +++|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (241)
T PRK10895 153 AANPKFILLDEPFAGVDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQD 227 (241)
T ss_pred hcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhcC
Confidence 99999999999999999999999999998765 48899999999988765 999999999999999999998753
No 252
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-41 Score=373.12 Aligned_cols=227 Identities=26% Similarity=0.427 Sum_probs=189.4
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCCC--CH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKSY--NL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~~ 1049 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+.+| ++|+|.+||.++... +.
T Consensus 6 ~i~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 82 (253)
T PRK14261 6 ILSTKNLNLWYGE---KHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADV 82 (253)
T ss_pred eEEEeeeEEEECC---eeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccch
Confidence 5899999999963 4699999999999999999999999999999999999763 489999999998776 45
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCCC--C-C----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKEV--A-T----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~--~-~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
...|+.++|+||++.+|+.|++||+.++... . + ++.+.++++..++.+ ++.+..+..+.+||||||
T Consensus 83 ~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~ 155 (253)
T PRK14261 83 VALRRKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWD-------EVKDRLHDSALSLSGGQQ 155 (253)
T ss_pred hhhhceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCch-------hhHHHhhcChhhCCHHHH
Confidence 6778899999999999999999999875321 1 1 123334444443322 223345667788999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 156 qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~ 235 (253)
T PRK14261 156 QRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQI 235 (253)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHH
Confidence 9999999999999999999999999999999999999988777999999999999965 999999999999999999999
Q ss_pred hhcCCCchhHHHH
Q 047171 1202 LSMGNGGAYYSLI 1214 (1224)
Q Consensus 1202 l~~~~~g~y~~l~ 1214 (1224)
... +...+.+.+
T Consensus 236 ~~~-~~~~~~~~~ 247 (253)
T PRK14261 236 FEN-PHEELTENY 247 (253)
T ss_pred HhC-CCcHHHHHH
Confidence 765 233444443
No 253
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.3e-41 Score=377.59 Aligned_cols=221 Identities=29% Similarity=0.537 Sum_probs=182.8
Q ss_pred cEEEEEEEEECCCCC--CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCC----CHH
Q 047171 977 FIELKNVFFSYPSRP--DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSY----NLR 1050 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~~~ 1050 (1224)
.|+++|++++|++.. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++... +..
T Consensus 2 ~i~~~~l~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~ 81 (287)
T PRK13641 2 SIKFENVDYIYSPGTPMEKKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLK 81 (287)
T ss_pred EEEEEEEEEEcCCCCCccccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHH
Confidence 378999999996321 14699999999999999999999999999999999999999999999999998653 345
Q ss_pred HHhcceEEEecCC--CCCcccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhccccccc-ccCCCCCCCChHHHHHH
Q 047171 1051 KLRSCIALVSQEP--TLFAGTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDT-YCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSGGQrQRl 1125 (1224)
..|+.++|+||+| .+|..|++|||.++.. ..+.++..+. +.+++..+ |+++ .......+||||||||+
T Consensus 82 ~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl 154 (287)
T PRK13641 82 KLRKKVSLVFQFPEAQLFENTVLKDVEFGPKNFGFSEDEAKEK-----ALKWLKKV--GLSEDLISKSPFELSGGQMRRV 154 (287)
T ss_pred HHHhceEEEEeChhhhhccchHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhhCCcccCCHHHHHHH
Confidence 6788999999998 5788899999986421 2233322211 12233322 4432 33455678999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
+|||||+.+|++|||||||++||+.+...+.+.|+++. ++.|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 155 ~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 155 AIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999875 47899999999999865 99999999999999999999875
Q ss_pred c
Q 047171 1204 M 1204 (1224)
Q Consensus 1204 ~ 1204 (1224)
.
T Consensus 235 ~ 235 (287)
T PRK13641 235 D 235 (287)
T ss_pred C
Confidence 3
No 254
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6e-41 Score=374.48 Aligned_cols=219 Identities=30% Similarity=0.445 Sum_probs=186.5
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCC--CC
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKS--YN 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~ 1048 (1224)
+.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++| ++|+|.+||.++.. .+
T Consensus 6 ~~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~ 82 (259)
T PRK14260 6 PAIKVKDLSFYYNT---SKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFGQNIYDPRIN 82 (259)
T ss_pred ceEEEEEEEEEECC---eEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECCEeccccccc
Confidence 36999999999963 4599999999999999999999999999999999999985 48999999998854 45
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHccCCC---CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHH
Q 047171 1049 LRKLRSCIALVSQEPTLFAGTIRQNIVYGKE---VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQ 1121 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~---~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQ 1121 (1224)
...+|++++|+||++.+|+.|++||+.++.. ..+ ++.+.++++.+++.+++. ......+..|||||
T Consensus 83 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LS~G~ 155 (259)
T PRK14260 83 INRLRRQIGMVFQRPNPFPMSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVK-------DKLNKSALGLSGGQ 155 (259)
T ss_pred hHhhhhheEEEecccccCCccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHH
Confidence 5678899999999999999999999986421 111 123445555556544332 12345567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe-----CCEEEEe
Q 047171 1122 KQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIK-----NGKVVEQ 1195 (1224)
Q Consensus 1122 rQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~-----~G~Ive~ 1195 (1224)
|||++||||++++|++|||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||++++|+ +|++++.
T Consensus 156 ~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~i~~~~d~i~~l~~~~~~~G~i~~~ 235 (259)
T PRK14260 156 QQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRSELTIAIVTHNMQQATRVSDFTAFFSTDESRIGQMVEF 235 (259)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCeEEEEeccCCCCceEEEe
Confidence 99999999999999999999999999999999999999998777999999999999876 99999998 5999999
Q ss_pred cChhHHhhc
Q 047171 1196 GTQSSLLSM 1204 (1224)
Q Consensus 1196 Gt~~eLl~~ 1204 (1224)
|+++++.+.
T Consensus 236 ~~~~~~~~~ 244 (259)
T PRK14260 236 GVTTQIFSN 244 (259)
T ss_pred CCHHHHhcC
Confidence 999999764
No 255
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.5e-41 Score=374.55 Aligned_cols=222 Identities=28% Similarity=0.455 Sum_probs=189.3
Q ss_pred CCcccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCC--
Q 047171 973 PTKGFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIK-- 1045 (1224)
Q Consensus 973 ~~~g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~-- 1045 (1224)
+..+.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+.+| ++|+|.+||.++.
T Consensus 12 ~~~~~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~g~~~~~~ 88 (265)
T PRK14252 12 PTQQKSEVNKLNFYYGG---YQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILHPDNVNIL 88 (265)
T ss_pred CCCceEEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEcCcccccc
Confidence 34567999999999963 3699999999999999999999999999999999999875 7999999998774
Q ss_pred --CCCHHHHhcceEEEecCCCCCcccHHHHHccCCC--C-----CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCC
Q 047171 1046 --SYNLRKLRSCIALVSQEPTLFAGTIRQNIVYGKE--V-----ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQ 1116 (1224)
Q Consensus 1046 --~~~~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~-----~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~ 1116 (1224)
..+...+|+.++|+||++.+|.+|++||+.++.. . ..++++.++++.+++.+ ++.+..+.....
T Consensus 89 ~~~~~~~~~~~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~ 161 (265)
T PRK14252 89 SPEVDPIEVRMRISMVFQKPNPFPKSIFENVAYGLRIRGVKRRSILEERVENALRNAALWD-------EVKDRLGDLAFN 161 (265)
T ss_pred ccccCHHHHhccEEEEccCCcCCcchHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCch-------hhhHHHhCCccc
Confidence 3345678899999999999999999999986521 1 11344555555555433 223344566778
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 047171 1117 LSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQ 1195 (1224)
Q Consensus 1117 LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~ 1195 (1224)
||||||||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.
T Consensus 162 LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~tiiivth~~~~~~~~~d~i~~l~~G~i~~~ 241 (265)
T PRK14252 162 LSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKNKVTILIVTHNMQQAARVSDYTAYMYMGELIEF 241 (265)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCEEEEEecCHHHHHHhCCEEEEEECCEEEEe
Confidence 9999999999999999999999999999999999999999999988777899999999999965 999999999999999
Q ss_pred cChhHHhhc
Q 047171 1196 GTQSSLLSM 1204 (1224)
Q Consensus 1196 Gt~~eLl~~ 1204 (1224)
|+++++...
T Consensus 242 g~~~~~~~~ 250 (265)
T PRK14252 242 GATDTIFIK 250 (265)
T ss_pred CCHHHHHhC
Confidence 999999764
No 256
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-41 Score=371.18 Aligned_cols=204 Identities=31% Similarity=0.442 Sum_probs=176.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++ ..+|+++
T Consensus 12 ~l~i~~l~~~~~~---~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~-----~~~~~~i 83 (257)
T PRK11247 12 PLLLNAVSKRYGE---RTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPL-----AEAREDT 83 (257)
T ss_pred cEEEEEEEEEECC---cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEH-----HHhhCce
Confidence 5999999999963 4699999999999999999999999999999999999999999999999865 3567899
Q ss_pred EEEecCCCCCc-ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNP 1135 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p 1135 (1224)
+|++|++.+|+ .|++||+.++.....++++.++++..++.+ .......+||||||||++|||||+++|
T Consensus 84 ~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~-----------~~~~~~~~LSgGqkqrl~laraL~~~p 152 (257)
T PRK11247 84 RLMFQDARLLPWKKVIDNVGLGLKGQWRDAALQALAAVGLAD-----------RANEWPAALSGGQKQRVALARALIHRP 152 (257)
T ss_pred EEEecCccCCCCCcHHHHHHhcccchHHHHHHHHHHHcCChh-----------HhcCChhhCCHHHHHHHHHHHHHhcCC
Confidence 99999999987 699999987632222445555555555443 334455789999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChh
Q 047171 1136 MILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQS 1199 (1224)
Q Consensus 1136 ~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~ 1199 (1224)
++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 153 ~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 153 GLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999999998864 37899999999999865 9999999999999998764
No 257
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=8.8e-41 Score=374.33 Aligned_cols=231 Identities=24% Similarity=0.392 Sum_probs=190.5
Q ss_pred cEEEEEEEEECCCC------CCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHH
Q 047171 977 FIELKNVFFSYPSR------PDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLR 1050 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~ 1050 (1224)
.|+++||+++|+.. .+.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.+
T Consensus 4 ~l~~~~l~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~ 83 (267)
T PRK15112 4 LLEVRNLSKTFRYRTGWFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPTSGELLIDDHPLHFGDYS 83 (267)
T ss_pred eEEEeceEEEecCCCCcccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCchh
Confidence 48999999999631 124699999999999999999999999999999999999999999999999998765666
Q ss_pred HHhcceEEEecCCC--CCc-ccHHHHHccCC---CCCC----HHHHHHHHHHHhHH-HHHHhcccccccccCCCCCCCCh
Q 047171 1051 KLRSCIALVSQEPT--LFA-GTIRQNIVYGK---EVAT----EAEIRKAAVLANAH-EFISSTEDGYDTYCGERGVQLSG 1119 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp~--LF~-gTIreNl~~~~---~~~~----deei~~al~~a~l~-~~I~~lp~gldt~vge~G~~LSG 1119 (1224)
..+++++|+||+|. ++. -|+.+|+.+.. .... ++++.++++..++. +. . .....+|||
T Consensus 84 ~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~~LS~ 152 (267)
T PRK15112 84 YRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDH-------A----SYYPHMLAP 152 (267)
T ss_pred hHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHH-------H----hcCchhcCH
Confidence 66788999999985 444 48999986431 1111 23455555555552 22 1 223457999
Q ss_pred HHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1120 GQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1120 GQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
|||||++||||++++|+||||||||++||+++.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 153 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~G~i~~~~ 232 (267)
T PRK15112 153 GQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLGMMKHISDQVLVMHQGEVVERG 232 (267)
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEecC
Confidence 99999999999999999999999999999999999999999875 37899999999999987 9999999999999999
Q ss_pred ChhHHhhcCCCchhHHHHHHhh
Q 047171 1197 TQSSLLSMGNGGAYYSLIKMQA 1218 (1224)
Q Consensus 1197 t~~eLl~~~~~g~y~~l~~~q~ 1218 (1224)
+++++........+++++....
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~ 254 (267)
T PRK15112 233 STADVLASPLHELTKRLIAGHF 254 (267)
T ss_pred CHHHHhcCCCCHHHHHHHHhcc
Confidence 9999987634566777886553
No 258
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-41 Score=372.05 Aligned_cols=218 Identities=28% Similarity=0.436 Sum_probs=185.5
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCCC--CH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKSY--NL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~~--~~ 1049 (1224)
.|+++|++++|++ .++|+|+||+|++||.++|+|+||||||||+++|+|+++| ++|+|.+||.++... +.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~ 80 (251)
T PRK14270 4 KMESKNLNLWYGE---KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDV 80 (251)
T ss_pred EEEEEEeEEEECC---eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccH
Confidence 5899999999963 4599999999999999999999999999999999999875 799999999998653 34
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCCC--C-CH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKEV--A-TE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~--~-~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||++.+|+.|++||+.++... . +. +++.++++.+++.+.+ ..........||||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~ 153 (251)
T PRK14270 81 VELRKRVGMVFQKPNPFPMSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEV-------KDDLKKSALKLSGGQQ 153 (251)
T ss_pred HHHHhheEEEecCCCcCCCcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHHH
Confidence 5678999999999999999999999865211 1 11 2344455555443222 2233456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|+||||||||++||+.+...+.+.|++..+++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 154 qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~ 233 (251)
T PRK14270 154 QRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKKEYTIVIVTHNMQQASRVSDYTAFFLMGDLIEFNKTEKI 233 (251)
T ss_pred HHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEEcCHHHHHHhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988777899999999999876 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
...
T Consensus 234 ~~~ 236 (251)
T PRK14270 234 FLE 236 (251)
T ss_pred hcC
Confidence 764
No 259
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-41 Score=379.87 Aligned_cols=203 Identities=32% Similarity=0.516 Sum_probs=174.7
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
.|+++||+++|++. .++++++|+|||||||||++++|+||.+|++|+|.+||+++.+++++ ++.||+|
T Consensus 5 ~l~i~~v~k~yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~~G~I~l~G~~i~~lpp~--kR~ig~V 82 (352)
T COG3842 5 ALEIRNVSKSFGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPSSGEILLDGEDITDVPPE--KRPIGMV 82 (352)
T ss_pred eEEEEeeeeecCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh--hccccee
Confidence 58888888888732 35779999999999999999999999999999999999999998876 5689999
Q ss_pred cCCCCCCcc-cHHHHHhcCCC---CCCHH----HHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHh
Q 047171 397 NQEPILFST-SIKENILIGKP---GASME----TVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARAL 468 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~---~~~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal 468 (1224)
+|+..||+. ||+|||.||.. ....+ ++.++.+..++.+ .-.+++++|||||||||||||||
T Consensus 83 FQ~YALFPHltV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~-----------~~~R~p~qLSGGQqQRVALARAL 151 (352)
T COG3842 83 FQSYALFPHMTVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEG-----------FADRKPHQLSGGQQQRVALARAL 151 (352)
T ss_pred ecCcccCCCCcHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchh-----------hhhhChhhhChHHHHHHHHHHHh
Confidence 999999976 99999999975 11222 4455555554444 45567789999999999999999
Q ss_pred ccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhc
Q 047171 469 IRDPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMN 542 (1224)
Q Consensus 469 ~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~ 542 (1224)
..+|++||||||.||||.+-...++..++++. .|.|.|+|||+-++... +|||.||++|+|...|+++|+...+
T Consensus 152 ~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHDqeEAl~msDrI~Vm~~G~I~Q~gtP~eiY~~P 228 (352)
T COG3842 152 VPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHDQEEALAMSDRIAVMNDGRIEQVGTPEEIYERP 228 (352)
T ss_pred hcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhccceEEccCCceeecCCHHHHhhCc
Confidence 99999999999999999999998888887753 48999999999988755 9999999999999999999998764
No 260
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-40 Score=375.97 Aligned_cols=219 Identities=26% Similarity=0.466 Sum_probs=185.7
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCC--CC
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKS--YN 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~ 1048 (1224)
..|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++ |++|+|.++|.++.. .+
T Consensus 38 ~~l~i~~l~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G~~i~~~~~~ 114 (285)
T PRK14254 38 TVIEARDLNVFYGD---EQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRGKNVYDADVD 114 (285)
T ss_pred ceEEEEEEEEEECC---EeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccc
Confidence 45999999999963 469999999999999999999999999999999999997 689999999999864 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHccCCC--CC---CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1049 LRKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VA---TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~---~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
...+|++++||||++.+|..|++||+.++.. .. .+++++++++..++...+. ......+.+|||||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~-------~~~~~~~~~LSgGe~q 187 (285)
T PRK14254 115 PVALRRRIGMVFQKPNPFPKSIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVK-------DQLDSSGLDLSGGQQQ 187 (285)
T ss_pred hHhhhccEEEEecCCccCcCCHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhH-------HHHhCCcccCCHHHHH
Confidence 5678899999999999998999999986421 11 1334555555555432221 1234566789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEE-EEeCCEEEEecChhHH
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIV-VIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~-vl~~G~Ive~Gt~~eL 1201 (1224)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. |||++ +|++|+|++.|+++++
T Consensus 188 rv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~~~tiii~tH~~~~i~~~~dri~v~l~~G~i~~~g~~~~~ 267 (285)
T PRK14254 188 RLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAEEYTVVIVTHNMQQAARISDKTAVFLTGGELVEFDDTDKI 267 (285)
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEeeCCEEEEeCCHHHH
Confidence 999999999999999999999999999999999999998777899999999999876 99975 5699999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
...
T Consensus 268 ~~~ 270 (285)
T PRK14254 268 FEN 270 (285)
T ss_pred HhC
Confidence 764
No 261
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-41 Score=379.35 Aligned_cols=222 Identities=29% Similarity=0.482 Sum_probs=181.9
Q ss_pred ccEEEEEEEEECCCCC--CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCC----C-C
Q 047171 976 GFIELKNVFFSYPSRP--DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKS----Y-N 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~--~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~----~-~ 1048 (1224)
+.|+++|++++|++++ ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 5799999999997432 1359999999999999999999999999999999999999999999999998752 2 4
Q ss_pred HHHHhcceEEEecCC--CCCcccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHH
Q 047171 1049 LRKLRSCIALVSQEP--TLFAGTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp--~LF~gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQR 1124 (1224)
...+|++++|+||+| .+|..|++||+.++.. ..+.++..+.+. .+.+.+ .+|. ........+||||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~--~ll~~~-~L~~---~~~~~~~~~LS~Gq~qr 158 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVP--ELLKLV-QLPE---DYVKRSPFELSGGQKRR 158 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHH--HHHHHc-CCCh---hHhcCChhhCCHHHHHH
Confidence 567889999999998 4778899999987532 123333222111 111211 1221 22345667899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
++|||||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++
T Consensus 159 v~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 238 (289)
T PRK13645 159 VALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFEI 238 (289)
T ss_pred HHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999998753 7899999999998865 999999999999999999888
Q ss_pred hh
Q 047171 1202 LS 1203 (1224)
Q Consensus 1202 l~ 1203 (1224)
+.
T Consensus 239 ~~ 240 (289)
T PRK13645 239 FS 240 (289)
T ss_pred hc
Confidence 65
No 262
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=370.78 Aligned_cols=218 Identities=28% Similarity=0.468 Sum_probs=187.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~~ 1049 (1224)
.++++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+.+ |++|+|.+||.++.. .+.
T Consensus 3 ~l~~~~v~~~~~~---~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~ 79 (250)
T PRK14266 3 RIEVENLNTYFDD---AHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGVDIYDPAVDV 79 (250)
T ss_pred EEEEEeEEEEeCC---eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCEEcccccccH
Confidence 3789999999963 459999999999999999999999999999999999874 389999999999865 346
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC--C-CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE--V-ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~-~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||+|.+|+.|++||+.++.. . .+. +++.++++.+++.+++.. .....+.+||||||
T Consensus 80 ~~~~~~i~~~~q~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~-------~~~~~~~~LS~Gq~ 152 (250)
T PRK14266 80 VELRKKVGMVFQKPNPFPKSIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKD-------KLDKSALGLSGGQQ 152 (250)
T ss_pred HHHhhheEEEecCCccCcchHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHH-------HHhCCcccCCHHHH
Confidence 678999999999999999999999986521 1 122 334555666666555432 23455678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|+||||||||++||+.+.+.+.+.|++..+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 153 qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiii~sh~~~~~~~~~~~i~~l~~G~i~~~g~~~~~ 232 (250)
T PRK14266 153 QRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKEDYTIVIVTHNMQQATRVSKYTSFFLNGEIIESGLTDQI 232 (250)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEECCHHHHHhhcCEEEEEECCeEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999876 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
...
T Consensus 233 ~~~ 235 (250)
T PRK14266 233 FIN 235 (250)
T ss_pred HhC
Confidence 765
No 263
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=3.6e-41 Score=366.01 Aligned_cols=201 Identities=29% Similarity=0.473 Sum_probs=172.0
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHH---HHhc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLR---KLRS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~---~lR~ 1054 (1224)
|+++|++++|+. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+++.. .+|+
T Consensus 2 l~~~~l~~~~~~--~~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (214)
T TIGR02673 2 IEFHNVSKAYPG--GVAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPSRGQVRIAGEDVNRLRGRQLPLLRR 79 (214)
T ss_pred EEEEeeeEEeCC--CceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHh
Confidence 789999999952 34699999999999999999999999999999999999999999999999999877643 4788
Q ss_pred ceEEEecCCCCCc-ccHHHHHccCCC--CC----CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1055 CIALVSQEPTLFA-GTIRQNIVYGKE--VA----TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~-gTIreNl~~~~~--~~----~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
+++|+||+|.+|. .|++||+.++.. .. .+++++++++..++.++.. ....+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-----------~~~~~LS~G~~qrl~l 148 (214)
T TIGR02673 80 RIGVVFQDFRLLPDRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKAD-----------AFPEQLSGGEQQRVAI 148 (214)
T ss_pred heEEEecChhhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhh-----------CChhhCCHHHHHHHHH
Confidence 9999999999885 699999987421 11 1334555565555544332 2335799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGK 1191 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~ 1191 (1224)
||||+++|++|||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~ 214 (214)
T TIGR02673 149 ARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNKRGTTVIVATHDLSLVDRVAHRVIILDDGR 214 (214)
T ss_pred HHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEecCCC
Confidence 999999999999999999999999999999999875 48999999999999976 99999999985
No 264
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.1e-41 Score=383.96 Aligned_cols=228 Identities=22% Similarity=0.364 Sum_probs=186.6
Q ss_pred cEEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC---CceEEECCccCCCCCHHHH
Q 047171 977 FIELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ---SGSVMVDERNIKSYNLRKL 1052 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~---~G~I~idG~di~~~~~~~l 1052 (1224)
.++++|++++|+.+. ..++|+||||+|++||++||+|+||||||||+++|+|+++|. +|+|.+||.++..++.+++
T Consensus 12 ~L~i~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~ 91 (330)
T PRK09473 12 LLDVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKEL 91 (330)
T ss_pred eEEEeCeEEEEecCCCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHH
Confidence 589999999996432 246999999999999999999999999999999999999996 9999999999999887765
Q ss_pred h----cceEEEecCC--CCCc-ccHHHHHccCC---CCCCHHHH----HHHHHHHhHHHHHHhcccccccccCCCCCCCC
Q 047171 1053 R----SCIALVSQEP--TLFA-GTIRQNIVYGK---EVATEAEI----RKAAVLANAHEFISSTEDGYDTYCGERGVQLS 1118 (1224)
Q Consensus 1053 R----~~i~~V~Qdp--~LF~-gTIreNl~~~~---~~~~deei----~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1118 (1224)
| ++|+||||+| .++. .|+.+|+.... ...+.++. .+.++.++ +|++. ..++..+.+||
T Consensus 92 ~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vg-------L~~~~-~~~~~~p~~LS 163 (330)
T PRK09473 92 NKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVK-------MPEAR-KRMKMYPHEFS 163 (330)
T ss_pred HHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcC-------CCChH-HHhcCCcccCC
Confidence 3 4899999999 3544 57777764221 11233332 22222222 34332 23567788999
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEe
Q 047171 1119 GGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQ 1195 (1224)
Q Consensus 1119 GGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~ 1195 (1224)
||||||++|||||+.+|++||+|||||+||..+...|.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|.
T Consensus 164 gG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~~~~~~~Dri~vm~~G~ive~ 243 (330)
T PRK09473 164 GGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVLVMYAGRTMEY 243 (330)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEE
Confidence 9999999999999999999999999999999999999999988764 7899999999999975 999999999999999
Q ss_pred cChhHHhhcCCCchhHHH
Q 047171 1196 GTQSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1196 Gt~~eLl~~~~~g~y~~l 1213 (1224)
|+++++++. +...|.+.
T Consensus 244 g~~~~i~~~-p~~pyt~~ 260 (330)
T PRK09473 244 GNARDVFYQ-PSHPYSIG 260 (330)
T ss_pred CCHHHHHhC-CCCHHHHH
Confidence 999999986 45556553
No 265
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=100.00 E-value=1.1e-40 Score=363.04 Aligned_cols=210 Identities=30% Similarity=0.456 Sum_probs=186.6
Q ss_pred EEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH----HHHhc
Q 047171 979 ELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL----RKLRS 1054 (1224)
Q Consensus 979 ~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~----~~lR~ 1054 (1224)
.+.|+.|+|+.+ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ...|+
T Consensus 2 ~~~~~~~~~~~~--~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 79 (218)
T cd03290 2 QVTNGYFSWGSG--LATLSNINIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVHWSNKNESEPSFEATRSRNRY 79 (218)
T ss_pred eeeeeEEecCCC--CcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCeEEECCcccccccccccchhhcc
Confidence 567899999743 469999999999999999999999999999999999999999999999998876542 34577
Q ss_pred ceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1055 CIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
.++|++|+|.+|+.|++||+.++.+ .++++.+++++..++.+++..+|.|+++..+....+||||||||++||||++++
T Consensus 80 ~i~~~~q~~~~~~~t~~~nl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (218)
T cd03290 80 SVAYAAQKPWLLNATVEENITFGSP-FNKQRYKAVTDACSLQPDIDLLPFGDQTEIGERGINLSGGQRQRICVARALYQN 158 (218)
T ss_pred eEEEEcCCCccccccHHHHHhhcCc-CCHHHHHHHHHHhCcHHHHHhCcCccccCcccCCCcCCHHHHHHHHHHHHHhhC
Confidence 8999999999999999999998643 355667788888888888888999999999999999999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHH--HHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCE
Q 047171 1135 PMILLLDEATSALDSASENLVQE--ALEKMM-VGRTCVVVAHRLSTIQKADNIVVIKNGK 1191 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~--~l~~~~-~~~TvI~IaHrl~ti~~aD~I~vl~~G~ 1191 (1224)
|++|||||||++||+.+.+.+.+ .++... .++|+|++||+++.+..||++++|++|+
T Consensus 159 p~illlDEPt~~LD~~~~~~l~~~~ll~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~G~ 218 (218)
T cd03290 159 TNIVFLDDPFSALDIHLSDHLMQEGILKFLQDDKRTLVLVTHKLQYLPHADWIIAMKDGS 218 (218)
T ss_pred CCEEEEeCCccccCHHHHHHHHHHHHHHHHhcCCCEEEEEeCChHHHhhCCEEEEecCCC
Confidence 99999999999999999988887 454443 3689999999999998899999999884
No 266
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=371.22 Aligned_cols=212 Identities=30% Similarity=0.493 Sum_probs=183.6
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+...++++++
T Consensus 3 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (258)
T PRK13548 3 LEARNLSVRLGG---RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRA 79 (258)
T ss_pred EEEEeEEEEeCC---eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheE
Confidence 789999999963 46999999999999999999999999999999999999999999999999998888888889999
Q ss_pred EEecCCCC-CcccHHHHHccCCCCC------CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTL-FAGTIRQNIVYGKEVA------TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~L-F~gTIreNl~~~~~~~------~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||++.+ +..|++||+.++.... .++.+.++++..++.+ ........||||||||++||||
T Consensus 80 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LSgGe~qrv~la~a 148 (258)
T PRK13548 80 VLPQHSSLSFPFTVEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAH-----------LAGRDYPQLSGGEQQRVQLARV 148 (258)
T ss_pred EEccCCcCCCCCCHHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHh-----------HhcCCcccCCHHHHHHHHHHHH
Confidence 99999987 6789999998753211 1223444444444433 3334556899999999999999
Q ss_pred Hc------cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1131 VL------KNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1131 ll------~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
|+ .+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 149 l~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 228 (258)
T PRK13548 149 LAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEV 228 (258)
T ss_pred HhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHH
Confidence 99 5999999999999999999999999999875 47899999999999875 999999999999999999998
Q ss_pred hh
Q 047171 1202 LS 1203 (1224)
Q Consensus 1202 l~ 1203 (1224)
..
T Consensus 229 ~~ 230 (258)
T PRK13548 229 LT 230 (258)
T ss_pred hC
Confidence 75
No 267
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.3e-41 Score=383.11 Aligned_cols=228 Identities=22% Similarity=0.310 Sum_probs=184.1
Q ss_pred cEEEEEEEEECCCCCC-ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC----CCceEEECCccCCCCCHHH
Q 047171 977 FIELKNVFFSYPSRPD-QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP----QSGSVMVDERNIKSYNLRK 1051 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p----~~G~I~idG~di~~~~~~~ 1051 (1224)
.|+++|++++|+.+.. ..+|+||||+|++||.+||||+||||||||+++|+|+++| ++|+|.+||.|+.+++.+.
T Consensus 3 ~L~v~~l~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~ 82 (326)
T PRK11022 3 LLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKE 82 (326)
T ss_pred eEEEeCeEEEECCCCccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHH
Confidence 3799999999974322 3599999999999999999999999999999999999984 8999999999999888776
Q ss_pred Hh----cceEEEecCCC--CCc-ccHHHHH----ccCCCCC---CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCC
Q 047171 1052 LR----SCIALVSQEPT--LFA-GTIRQNI----VYGKEVA---TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQL 1117 (1224)
Q Consensus 1052 lR----~~i~~V~Qdp~--LF~-gTIreNl----~~~~~~~---~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~L 1117 (1224)
+| ++|+||||+|. ++. .|+.+|+ ....... ..+++.++++.+++.+. .......+.+|
T Consensus 83 ~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~--------~~~l~~~p~~L 154 (326)
T PRK11022 83 RRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDP--------ASRLDVYPHQL 154 (326)
T ss_pred HHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCCh--------HHHHhCCchhC
Confidence 54 37999999995 332 3565554 3221111 12334555555554321 12234566789
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 047171 1118 SGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVE 1194 (1224)
Q Consensus 1118 SGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive 1194 (1224)
|||||||++|||||+.+|++||+|||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++|+|+|
T Consensus 155 SgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~~~~~~adri~vm~~G~ive 234 (326)
T PRK11022 155 SGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVE 234 (326)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998753 7899999999999854 99999999999999
Q ss_pred ecChhHHhhcCCCchhHHH
Q 047171 1195 QGTQSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1195 ~Gt~~eLl~~~~~g~y~~l 1213 (1224)
.|+++++++. +...|.+.
T Consensus 235 ~g~~~~~~~~-p~hpyt~~ 252 (326)
T PRK11022 235 TGKAHDIFRA-PRHPYTQA 252 (326)
T ss_pred ECCHHHHhhC-CCChHHHH
Confidence 9999999976 34556543
No 268
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=4.2e-41 Score=364.65 Aligned_cols=201 Identities=37% Similarity=0.636 Sum_probs=170.9
Q ss_pred EEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEE
Q 047171 979 ELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIAL 1058 (1224)
Q Consensus 979 ~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1058 (1224)
+++|++++|+++ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+...+|++++|
T Consensus 1 ~~~~l~~~~~~~-~~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~ 79 (211)
T cd03225 1 ELKNLSFSYPDG-ARPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGL 79 (211)
T ss_pred CceeEEEecCCC-CeeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceE
Confidence 468999999642 2469999999999999999999999999999999999999999999999999988888888999999
Q ss_pred EecCC--CCCcccHHHHHccCCC--CCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1059 VSQEP--TLFAGTIRQNIVYGKE--VATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1059 V~Qdp--~LF~gTIreNl~~~~~--~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
+||++ .+++.|++||+.++.. ..+.. ++.+.++..+ ++.........||||||||++||||
T Consensus 80 ~~q~~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~lara 148 (211)
T cd03225 80 VFQNPDDQFFGPTVEEEVAFGLENLGLPEEEIEERVEEALELVG-----------LEGLRDRSPFTLSGGQKQRVAIAGV 148 (211)
T ss_pred EecChhhhcCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcC-----------cHhhhcCCcccCCHHHHHHHHHHHH
Confidence 99998 3678899999987522 11222 2333333333 3333445567899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCE
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGK 1191 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~ 1191 (1224)
|+++|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+
T Consensus 149 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 149 LAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 999999999999999999999999999998876 47899999999999987 99999999985
No 269
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.3e-41 Score=350.89 Aligned_cols=191 Identities=31% Similarity=0.481 Sum_probs=156.7
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEec
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVN 397 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 397 (1224)
+++++|+++|++. .++++++|+||||||||||+++|+|+.+|++|+|.++|.++..- ...+|||+
T Consensus 4 l~i~~v~~~f~~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~~G~V~~~g~~v~~p-----~~~~~~vF 78 (248)
T COG1116 4 LEIEGVSKSFGGVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPTSGEVLLDGRPVTGP-----GPDIGYVF 78 (248)
T ss_pred EEEEeeEEEeCceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCcccCCC-----CCCEEEEe
Confidence 4555555555431 36789999999999999999999999999999999999987432 34799999
Q ss_pred CCCCCCcc-cHHHHHhcCCCCC--CHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 398 QEPILFST-SIKENILIGKPGA--SMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 398 Q~~~lf~~-ti~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
|++.||+= ||+||+.+|.... +.+|- .+.+.+.++.. |+...-+..+.+||||||||+||||||+.+|+|
T Consensus 79 Q~~~LlPW~Tv~~NV~l~l~~~~~~~~e~-----~~~a~~~L~~V--gL~~~~~~~P~qLSGGMrQRVaiARAL~~~P~l 151 (248)
T COG1116 79 QEDALLPWLTVLDNVALGLELRGKSKAEA-----RERAKELLELV--GLAGFEDKYPHQLSGGMRQRVAIARALATRPKL 151 (248)
T ss_pred ccCcccchhhHHhhheehhhccccchHhH-----HHHHHHHHHHc--CCcchhhcCccccChHHHHHHHHHHHHhcCCCE
Confidence 99999974 9999999987532 22211 11334555555 666666778899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeC--ceEE
Q 047171 475 LLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQS--GRVI 530 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~--G~i~ 530 (1224)
|+||||++|||+.|...+++.+.++. .++|+++|||++++.-. +|||+||.+ |+|.
T Consensus 152 LLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHdi~EAv~LsdRivvl~~~P~~i~ 212 (248)
T COG1116 152 LLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHDVDEAVYLADRVVVLSNRPGRIG 212 (248)
T ss_pred EEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCCHHHHHhhhCEEEEecCCCccee
Confidence 99999999999999999999988753 47999999999999765 999999999 5553
No 270
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-40 Score=373.98 Aligned_cols=216 Identities=31% Similarity=0.499 Sum_probs=184.9
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++. ..++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+...+|+++
T Consensus 7 ~l~i~~l~~~~~~~-~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 85 (269)
T PRK13648 7 IIVFKNVSFQYQSD-ASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHI 85 (269)
T ss_pred eEEEEEEEEEcCCC-CCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhe
Confidence 58999999999743 24589999999999999999999999999999999999999999999999999888888899999
Q ss_pred EEEecCCC--CCcccHHHHHccCCCC--CCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1057 ALVSQEPT--LFAGTIRQNIVYGKEV--ATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1057 ~~V~Qdp~--LF~gTIreNl~~~~~~--~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+|+||+|. ++..|+++|+.++... .+.+ ++.++++..++.+ .......+||||||||++||
T Consensus 86 ~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~la 154 (269)
T PRK13648 86 GIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLE-----------RADYEPNALSGGQKQRVAIA 154 (269)
T ss_pred eEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCch-----------hhhCCcccCCHHHHHHHHHH
Confidence 99999994 4567899999875321 1222 2333444433322 23345568999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||++.+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 155 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 155 GVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred HHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999999999998753 7899999999999888999999999999999999998764
No 271
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=8.7e-41 Score=350.91 Aligned_cols=193 Identities=36% Similarity=0.556 Sum_probs=157.4
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH---H-hcccEEecCCCCCCc
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW---L-RSQMGLVNQEPILFS 404 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~-r~~i~~v~Q~~~lf~ 404 (1224)
.+++|+|..+ +++++||+||||||||||+++|.|+..|++|.|.++|+|+..++.+. + |++||||+|+..|++
T Consensus 20 ~L~~v~l~i~---~Ge~vaI~GpSGSGKSTLLniig~ld~pt~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl~ 96 (226)
T COG1136 20 ALKDVNLEIE---AGEFVAIVGPSGSGKSTLLNLLGGLDKPTSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLLP 96 (226)
T ss_pred ecccceEEEc---CCCEEEEECCCCCCHHHHHHHHhcccCCCCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCCC
Confidence 4556666653 57799999999999999999999999999999999999999887433 3 457999999999987
Q ss_pred c-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhcccccccccc-CCCCCCChHHHHHHHHHHHhccCCCEEEEeCC
Q 047171 405 T-SIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVG-QFGVQLSGGQKQRIAIARALIRDPKILLLDEA 480 (1224)
Q Consensus 405 ~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~-~~g~~LSgGq~qriaiARal~~~~~ililDE~ 480 (1224)
. |+.|||.+... .....+. ...+.+.++.+ |+..... .++.+|||||||||||||||+.+|+|++.|||
T Consensus 97 ~ltv~ENv~lpl~~~~~~~~~~-----~~~~~~l~~~l--gl~~~~~~~~p~eLSGGqqQRVAIARAL~~~P~iilADEP 169 (226)
T COG1136 97 DLTVLENVELPLLIAGKSAGRR-----KRAAEELLEVL--GLEDRLLKKKPSELSGGQQQRVAIARALINNPKIILADEP 169 (226)
T ss_pred CCCHHHHHHhHHHHcCCChhHH-----HHHHHHHHHhc--CChhhhccCCchhcCHHHHHHHHHHHHHhcCCCeEEeeCc
Confidence 6 99999985311 1111111 11122334444 5553444 67899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhccCEEEEEeCceEEe
Q 047171 481 TSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQSGRVIE 531 (1224)
Q Consensus 481 ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~ 531 (1224)
|++||.++.+.|.+.+.+.. .|+|+|+|||+......|||++.|.||++..
T Consensus 170 TgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~~lA~~~dr~i~l~dG~~~~ 222 (226)
T COG1136 170 TGNLDSKTAKEVLELLRELNKERGKTIIMVTHDPELAKYADRVIELKDGKIEE 222 (226)
T ss_pred cccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHhCCEEEEEeCCeeee
Confidence 99999999999999998873 4899999999999999999999999999543
No 272
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=7.5e-41 Score=381.36 Aligned_cols=217 Identities=30% Similarity=0.478 Sum_probs=180.7
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++... ...+|+++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i 79 (303)
T TIGR01288 4 AIDLVGVSKSYGD---KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAI 79 (303)
T ss_pred EEEEEeEEEEeCC---eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcE
Confidence 4899999999963 4599999999999999999999999999999999999999999999999998653 35678999
Q ss_pred EEEecCCCCCc-ccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
+|+||++.+|. .|++||+.+... ..+..+..+.++ .+.+.+ .+++.+++ ...+||||||||++|||||++
T Consensus 80 ~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~ll~~~-~l~~~~~~----~~~~LSgG~~qrv~la~al~~ 152 (303)
T TIGR01288 80 GVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIP--SLLEFA-RLESKADV----RVALLSGGMKRRLTLARALIN 152 (303)
T ss_pred EEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHH--HHHHHC-CChhHhcC----chhhCCHHHHHHHHHHHHHhc
Confidence 99999999885 699999974321 123333322221 111211 22333344 445799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
+|++|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 153 ~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 153 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999875 47899999999999976 999999999999999999999754
No 273
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-41 Score=369.46 Aligned_cols=216 Identities=29% Similarity=0.495 Sum_probs=181.0
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCC------CCCHHH
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIK------SYNLRK 1051 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~------~~~~~~ 1051 (1224)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++. ..+...
T Consensus 3 l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (242)
T PRK11124 3 IQLNGINCFYGA---HQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRE 79 (242)
T ss_pred EEEEeeEEEECC---eeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHH
Confidence 789999999963 35999999999999999999999999999999999999999999999999873 123456
Q ss_pred HhcceEEEecCCCCCc-ccHHHHHccCC---CCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1052 LRSCIALVSQEPTLFA-GTIRQNIVYGK---EVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1052 lR~~i~~V~Qdp~LF~-gTIreNl~~~~---~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
+|++++|+||++.+|. .|++||+.++. ...+.++..+ .+.+++..+ |++........+||||||||++|
T Consensus 80 ~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~l 152 (242)
T PRK11124 80 LRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALA-----RAEKLLERL--RLKPYADRFPLHLSGGQQQRVAI 152 (242)
T ss_pred HHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CChhhhhCChhhCCHHHHHHHHH
Confidence 7899999999999987 49999997421 1112222111 123333333 45555555667899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
|||++++|++|||||||++||+++...+.+.|+++. +++|+|++||+++.+.. ||++++|++|+++++|+++++.+
T Consensus 153 aral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 153 ARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred HHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 999999999999999999999999999999999875 47999999999999865 99999999999999999998764
No 274
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-40 Score=371.79 Aligned_cols=220 Identities=20% Similarity=0.432 Sum_probs=184.9
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHH-hcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKL-RSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~l-R~~ 1055 (1224)
.|+++|++++|+ +.++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+...+ |..
T Consensus 5 ~l~~~~l~~~~~---~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (255)
T PRK11300 5 LLSVSGLMMRFG---GLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMG 81 (255)
T ss_pred eEEEeeEEEEEC---CEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcC
Confidence 489999999996 3469999999999999999999999999999999999999999999999999988776654 556
Q ss_pred eEEEecCCCCCcc-cHHHHHccCCCCCC--------------HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1056 IALVSQEPTLFAG-TIRQNIVYGKEVAT--------------EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1056 i~~V~Qdp~LF~g-TIreNl~~~~~~~~--------------deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
++|+||+|.+|.. |++||+.++..... +.+..+. ...+.+++..+ |++........+||||
T Consensus 82 i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~--gl~~~~~~~~~~LS~G 157 (255)
T PRK11300 82 VVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEA--LDRAATWLERV--GLLEHANRQAGNLAYG 157 (255)
T ss_pred eEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHH--HHHHHHHHHhC--ChhhhhhCChhhCCHH
Confidence 9999999999985 99999997531100 0000000 11223344443 5555666777899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt 1197 (1224)
||||++||||++.+|++|||||||++||+.+.+.+.+.|.++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 158 ~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~ 237 (255)
T PRK11300 158 QQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGT 237 (255)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCC
Confidence 99999999999999999999999999999999999999988753 7899999999999866 99999999999999999
Q ss_pred hhHHhh
Q 047171 1198 QSSLLS 1203 (1224)
Q Consensus 1198 ~~eLl~ 1203 (1224)
++++..
T Consensus 238 ~~~~~~ 243 (255)
T PRK11300 238 PEEIRN 243 (255)
T ss_pred HHHHhh
Confidence 999865
No 275
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=6.4e-41 Score=386.49 Aligned_cols=208 Identities=28% Similarity=0.469 Sum_probs=175.0
Q ss_pred ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCc----cCCCCCHHHHh----cceEEEecCCC
Q 047171 993 QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDER----NIKSYNLRKLR----SCIALVSQEPT 1064 (1224)
Q Consensus 993 ~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~----di~~~~~~~lR----~~i~~V~Qdp~ 1064 (1224)
..+|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|++||. ++...+.+.+| ++++||||++.
T Consensus 37 ~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vfQ~~~ 116 (382)
T TIGR03415 37 VVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVFQKFA 116 (382)
T ss_pred EEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEECCCc
Confidence 45899999999999999999999999999999999999999999999996 67777665543 58999999999
Q ss_pred CCc-ccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 047171 1065 LFA-GTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMI 1137 (1224)
Q Consensus 1065 LF~-gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~I 1137 (1224)
+|+ .|++||+.++.. ..+. +.+.++++.+++.++ ......+||||||||++|||||+++|+|
T Consensus 117 l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~-----------~~~~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 117 LMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQW-----------ADKKPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchh-----------hcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 997 799999987632 1222 234445555554433 3344457999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchhHH
Q 047171 1138 LLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYS 1212 (1224)
Q Consensus 1138 LlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~ 1212 (1224)
||||||||+||+.+.+.+++.|.++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++++.+ +.+.|.+
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~-p~~~~~~ 262 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN-PANDYVA 262 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC-cchHHHH
Confidence 999999999999999999999988753 7899999999999755 999999999999999999999875 3444443
No 276
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-40 Score=369.65 Aligned_cols=218 Identities=28% Similarity=0.451 Sum_probs=185.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCC-CCCHH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIK-SYNLR 1050 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~-~~~~~ 1050 (1224)
.++++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++| ++|+|.+||.++. ..+..
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~ 79 (249)
T PRK14253 3 KFNIENLDLFYGE---NQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGEDIYGNIDVA 79 (249)
T ss_pred eEEEeccEEEECC---eeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEEcccccchH
Confidence 4889999999963 4699999999999999999999999999999999999986 5999999999885 45667
Q ss_pred HHhcceEEEecCCCCCcccHHHHHccCCC--CC-CH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1051 KLRSCIALVSQEPTLFAGTIRQNIVYGKE--VA-TE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~-~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
.+|+.++|+||++.+|..|++||+.++.. .. .+ +++.++++.+++.+.+ .........+|||||||
T Consensus 80 ~~~~~i~~~~q~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~q 152 (249)
T PRK14253 80 DLRIKVGMVFQKPNPFPMSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEV-------KDRLKSHAFGLSGGQQQ 152 (249)
T ss_pred HHHhheeEEecCCCcCcccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhh-------hHHhhcCcccCCHHHHH
Confidence 88999999999999999999999987532 11 11 2233344444443322 23344556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
|++||||++.+|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (249)
T PRK14253 153 RLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKKNYTIVIVTHSMQQARRISDRTAFFLMGELVEHDDTQVIF 232 (249)
T ss_pred HHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999998777999999999999876 9999999999999999999987
Q ss_pred hc
Q 047171 1203 SM 1204 (1224)
Q Consensus 1203 ~~ 1204 (1224)
..
T Consensus 233 ~~ 234 (249)
T PRK14253 233 SN 234 (249)
T ss_pred cC
Confidence 54
No 277
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.9e-41 Score=375.39 Aligned_cols=213 Identities=28% Similarity=0.501 Sum_probs=180.5
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCC--CCCHHHHhcc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIK--SYNLRKLRSC 1055 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~--~~~~~~lR~~ 1055 (1224)
|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. +.+...+|++
T Consensus 2 l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (271)
T PRK13638 2 LATSDLWFRYQD---EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQ 78 (271)
T ss_pred eEEEEEEEEcCC---cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhh
Confidence 689999999963 45999999999999999999999999999999999999999999999999985 3345678899
Q ss_pred eEEEecCCC--CCcccHHHHHccCCC--CCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1056 IALVSQEPT--LFAGTIRQNIVYGKE--VATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1056 i~~V~Qdp~--LF~gTIreNl~~~~~--~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
++||||+|. +|..|+.+|+.++.. ..+.++ +.++++..++.++ ......+||||||||++|
T Consensus 79 i~~v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LSgG~~qrl~l 147 (271)
T PRK13638 79 VATVFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHF-----------RHQPIQCLSHGQKKRVAI 147 (271)
T ss_pred eEEEeeChhhccccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhH-----------hcCCchhCCHHHHHHHHH
Confidence 999999985 577899999986421 122222 3334444444332 233456899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||||+.+|+||||||||++||+.+...+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 148 araL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 148 AGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred HHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999865 999999999999999999998764
No 278
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=6.5e-41 Score=364.11 Aligned_cols=202 Identities=31% Similarity=0.479 Sum_probs=171.1
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH---HHHhc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL---RKLRS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~---~~lR~ 1054 (1224)
|+++|++++|+++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. ..+|+
T Consensus 1 l~~~~l~~~~~~~--~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 78 (214)
T cd03292 1 IEFINVTKTYPNG--TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPTSGTIRVNGQDVSDLRGRAIPYLRR 78 (214)
T ss_pred CEEEEEEEEeCCC--ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcccCCHHHHHHHHH
Confidence 4789999999632 359999999999999999999999999999999999999999999999999987654 34788
Q ss_pred ceEEEecCCCCCc-ccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1055 CIALVSQEPTLFA-GTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~-gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
.++||||+|.+|. .|++||+.++.. ..+. +++.++++..++.+. ......+||||||||++|
T Consensus 79 ~i~~v~q~~~~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~G~~qrv~l 147 (214)
T cd03292 79 KIGVVFQDFRLLPDRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHK-----------HRALPAELSGGEQQRVAI 147 (214)
T ss_pred heEEEecCchhccCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHH-----------hhCChhhcCHHHHHHHHH
Confidence 9999999999987 599999987521 1122 234444444444333 233445799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKV 1192 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~I 1192 (1224)
|||++++|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++
T Consensus 148 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~~ 214 (214)
T cd03292 148 ARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINKAGTTVVVATHAKELVDTTRHRVIALERGKL 214 (214)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999999999999999999999999874 57999999999999976 999999999974
No 279
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-40 Score=371.99 Aligned_cols=218 Identities=29% Similarity=0.457 Sum_probs=183.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~~ 1049 (1224)
.++++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 4 ~l~i~~v~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~ 80 (258)
T PRK14241 4 RIDVKDLNIYYGS---FHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDP 80 (258)
T ss_pred cEEEeeEEEEECC---EeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccCh
Confidence 4899999999963 3599999999999999999999999999999999999974 69999999998853 456
Q ss_pred HHHhcceEEEecCCCCCc-ccHHHHHccCCC---CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHH
Q 047171 1050 RKLRSCIALVSQEPTLFA-GTIRQNIVYGKE---VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQ 1121 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~~---~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQ 1121 (1224)
..+|+.++|++|++.+|. .|++||+.++.. ..+. +.+.++++..++.+.+ .........+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~ 153 (258)
T PRK14241 81 VAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEV-------KDRLDKPGGGLSGGQ 153 (258)
T ss_pred HHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhh-------hhHhhCCcccCCHHH
Confidence 678899999999999987 599999986421 1111 2334444444443222 223345567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe------CCEEEE
Q 047171 1122 KQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIK------NGKVVE 1194 (1224)
Q Consensus 1122 rQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~------~G~Ive 1194 (1224)
|||++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|+ +|+|++
T Consensus 154 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tviivsH~~~~~~~~~d~i~~l~~~~~~~~g~i~~ 233 (258)
T PRK14241 154 QQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQDYTIVIVTHNMQQAARVSDQTAFFNLEATGKPGRLVE 233 (258)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccCCCCceEEe
Confidence 99999999999999999999999999999999999999988777899999999999865 99999997 899999
Q ss_pred ecChhHHhhc
Q 047171 1195 QGTQSSLLSM 1204 (1224)
Q Consensus 1195 ~Gt~~eLl~~ 1204 (1224)
.|++++++..
T Consensus 234 ~~~~~~~~~~ 243 (258)
T PRK14241 234 IDDTEKIFSN 243 (258)
T ss_pred cCCHHHHHhC
Confidence 9999999764
No 280
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.1e-40 Score=379.24 Aligned_cols=216 Identities=23% Similarity=0.424 Sum_probs=184.8
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
++++|++++|+ +..+|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.. +...+|++++
T Consensus 3 l~~~~l~~~~~---~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig 78 (301)
T TIGR03522 3 IRVSSLTKLYG---TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIG 78 (301)
T ss_pred EEEEEEEEEEC---CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceE
Confidence 78999999996 3469999999999999999999999999999999999999999999999999876 4567889999
Q ss_pred EEecCCCCCcc-cHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1058 LVSQEPTLFAG-TIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1058 ~V~Qdp~LF~g-TIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
|+||+|.+|.+ |++||+.+... ..+.++..+. +.+.+..+ |++........+||||||||++|||||+++
T Consensus 79 ~~~q~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~ 151 (301)
T TIGR03522 79 YLPEHNPLYLDMYVREYLQFIAGIYGMKGQLLKQR-----VEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHD 151 (301)
T ss_pred EecCCCCCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcC
Confidence 99999999875 99999976421 1122222211 12233332 455555566678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|++|||||||++||+.+.+.+++.|+++.+++|+|++||+++.+.. ||||++|++|++++.|+++++.+.
T Consensus 152 p~lliLDEPt~gLD~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 152 PKVLILDEPTTGLDPNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred CCEEEEcCCcccCCHHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 9999999999999999999999999998778999999999999876 999999999999999999999764
No 281
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=7.2e-41 Score=365.66 Aligned_cols=209 Identities=26% Similarity=0.435 Sum_probs=179.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||++.|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++...+...+|+++
T Consensus 7 ~i~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (225)
T PRK10247 7 LLQLQNVGYLAGD---AKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQV 83 (225)
T ss_pred eEEEeccEEeeCC---ceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhcc
Confidence 5999999999963 4599999999999999999999999999999999999999999999999999888888889999
Q ss_pred EEEecCCCCCcccHHHHHccCC---CCC-CHHHHHHHHHHHhHHHHHHhcccccc-cccCCCCCCCChHHHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFAGTIRQNIVYGK---EVA-TEAEIRKAAVLANAHEFISSTEDGYD-TYCGERGVQLSGGQKQRIALARAV 1131 (1224)
Q Consensus 1057 ~~V~Qdp~LF~gTIreNl~~~~---~~~-~deei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSGGQrQRlaLARAl 1131 (1224)
+|+||++.+|+.|++||+.++. +.. .++++.+.++.. |+. +.......+||||||||++|||||
T Consensus 84 ~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~~LS~G~~qrv~laral 152 (225)
T PRK10247 84 SYCAQTPTLFGDTVYDNLIFPWQIRNQQPDPAIFLDDLERF-----------ALPDTILTKNIAELSGGEKQRISLIRNL 152 (225)
T ss_pred EEEecccccccccHHHHHHhHHhhcCCChHHHHHHHHHHHc-----------CCChHHhcCCcccCCHHHHHHHHHHHHH
Confidence 9999999999999999998642 111 122233333333 332 334566778999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhhcCEEEEEe-CCEEEEecChh
Q 047171 1132 LKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQKADNIVVIK-NGKVVEQGTQS 1199 (1224)
Q Consensus 1132 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~aD~I~vl~-~G~Ive~Gt~~ 1199 (1224)
+++|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+..||+|++|+ ++..+++|+|+
T Consensus 153 ~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 153 QFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred hcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999999999999875 3789999999999998899999995 66777899985
No 282
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1.6e-40 Score=365.93 Aligned_cols=211 Identities=34% Similarity=0.486 Sum_probs=179.9
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|.+||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+. .++.++
T Consensus 1 i~i~~l~~~~~~---~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~i~g~~~~~~~~--~~~~i~ 75 (237)
T TIGR00968 1 IEIANISKRFGS---FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPDSGRIRLNGQDATRVHA--RDRKIG 75 (237)
T ss_pred CEEEEEEEEECC---eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcCEE
Confidence 578999999963 359999999999999999999999999999999999999999999999999876553 478899
Q ss_pred EEecCCCCCcc-cHHHHHccCCCC--CC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFAG-TIRQNIVYGKEV--AT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~g-TIreNl~~~~~~--~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||+|.+|.+ |++||+.++... .+ ++++.++++..++.+ .......+|||||+||++||||
T Consensus 76 ~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~lS~G~~qrl~lara 144 (237)
T TIGR00968 76 FVFQHYALFKHLTVRDNIAFGLEIRKHPKAKIKARVEELLELVQLEG-----------LGDRYPNQLSGGQRQRVALARA 144 (237)
T ss_pred EEecChhhccCCcHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHh-----------HhhCChhhCCHHHHHHHHHHHH
Confidence 99999999975 999999875321 11 122333333333332 2334456899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
++++|+++||||||++||+++++.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++++.
T Consensus 145 l~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~~ 221 (237)
T TIGR00968 145 LAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQEEAMEVADRIVVMSNGKIEQIGSPDEVYDH 221 (237)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCEEEEEECCEEEEecCHHHHHcC
Confidence 9999999999999999999999999999998754 7899999999999866 999999999999999999999764
No 283
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=4.2e-40 Score=414.17 Aligned_cols=100 Identities=32% Similarity=0.525 Sum_probs=92.2
Q ss_pred cccc-ccCCCCCCCChHHHHHHHHHHHHccCC---CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh
Q 047171 1105 GYDT-YCGERGVQLSGGQKQRIALARAVLKNP---MILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQ 1179 (1224)
Q Consensus 1105 gldt-~vge~G~~LSGGQrQRlaLARAll~~p---~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~ 1179 (1224)
|++. ..+....+||||||||++|||+|+++| +++||||||++||+.+.+.+.+.|+++. +|+|+|+|+|+++.+.
T Consensus 818 gL~~l~l~~~~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsGLD~~~~~~L~~~L~~l~~~G~TVIiitH~~~~i~ 897 (943)
T PRK00349 818 GLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTGLHFEDIRKLLEVLHRLVDKGNTVVVIEHNLDVIK 897 (943)
T ss_pred CCCcccccCCcccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHH
Confidence 5544 467788899999999999999999999 9999999999999999999999999875 5889999999999999
Q ss_pred hcCEEEEE------eCCEEEEecChhHHhhc
Q 047171 1180 KADNIVVI------KNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1180 ~aD~I~vl------~~G~Ive~Gt~~eLl~~ 1204 (1224)
.||+|++| ++|+|++.|+++++.+.
T Consensus 898 ~aD~ii~Lgp~~G~~~G~Iv~~Gt~~el~~~ 928 (943)
T PRK00349 898 TADWIIDLGPEGGDGGGEIVATGTPEEVAKV 928 (943)
T ss_pred hCCEEEEecCCcCCCCCEEEEeCCHHHHHhC
Confidence 99999999 69999999999999876
No 284
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-40 Score=374.82 Aligned_cols=219 Identities=29% Similarity=0.421 Sum_probs=183.7
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCCC--C
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKSY--N 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~~--~ 1048 (1224)
..|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+.+ |++|+|.+||.++... +
T Consensus 38 ~~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g~~i~~~~~~ 114 (286)
T PRK14275 38 PHVVAKNFSIYYGE---FEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDGEDIYGKFTD 114 (286)
T ss_pred eEEEEeeeEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECCEEhhhcccc
Confidence 36899999999963 359999999999999999999999999999999999864 4999999999988643 3
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHccCCC--CC-CH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHH
Q 047171 1049 LRKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VA-TE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQ 1121 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~-~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQ 1121 (1224)
...+|++++||||+|.+|..|++|||.++.. .. +. +++.++++..++.+.+ .......+..|||||
T Consensus 115 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq 187 (286)
T PRK14275 115 EVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEV-------SDRLDKNALGLSGGQ 187 (286)
T ss_pred hHHhhhcEEEECCCCCCCccCHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccch-------hhHhhCChhhCCHHH
Confidence 3467899999999999998999999987531 11 11 2333444444432211 122345567899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhH
Q 047171 1122 KQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSS 1200 (1224)
Q Consensus 1122 rQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~e 1200 (1224)
|||++|||||+.+|++|||||||++||+++.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 188 ~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tvIivsH~~~~~~~~~d~i~~L~~G~i~~~g~~~~ 267 (286)
T PRK14275 188 QQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSYTIMIVTHNMQQASRVSDYTMFFYEGVLVEHAPTAQ 267 (286)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988777899999999999866 99999999999999999999
Q ss_pred Hhhc
Q 047171 1201 LLSM 1204 (1224)
Q Consensus 1201 Ll~~ 1204 (1224)
+...
T Consensus 268 ~~~~ 271 (286)
T PRK14275 268 LFTN 271 (286)
T ss_pred HHhC
Confidence 9865
No 285
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.8e-41 Score=367.39 Aligned_cols=211 Identities=33% Similarity=0.515 Sum_probs=181.2
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|+. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++.+.+. .++.++
T Consensus 1 l~~~~l~~~~~~---~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~~G~i~~~g~~~~~~~~--~~~~i~ 75 (232)
T cd03300 1 IELENVSKFYGG---FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPTSGEILLDGKDITNLPP--HKRPVN 75 (232)
T ss_pred CEEEeEEEEeCC---eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCh--hhcceE
Confidence 479999999963 369999999999999999999999999999999999999999999999999887654 368899
Q ss_pred EEecCCCCCcc-cHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFAG-TIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~g-TIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||++.+|.+ |++||+.++.. ..+ ++++.++++..++.++. .....+||||||||++||||
T Consensus 76 ~~~q~~~~~~~~t~~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~lS~G~~qrl~lara 144 (232)
T cd03300 76 TVFQNYALFPHLTVFENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYA-----------NRKPSQLSGGQQQRVAIARA 144 (232)
T ss_pred EEecccccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhh-----------cCChhhCCHHHHHHHHHHHH
Confidence 99999999965 99999986421 111 23444455554544443 34446899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
++++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 145 l~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~i~~l~~G~~~~~~~~~~~~~~ 221 (232)
T cd03300 145 LVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQEEALTMSDRIAVMNKGKIQQIGTPEEIYEE 221 (232)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEecCCHHHHHhC
Confidence 9999999999999999999999999999998763 7999999999999866 999999999999999999999764
No 286
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=371.80 Aligned_cols=213 Identities=27% Similarity=0.424 Sum_probs=185.4
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++ ..+|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+...+++.+
T Consensus 7 ~l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i 83 (265)
T PRK10253 7 RLRGEQLTLGYGK---YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPAHGHVWLDGEHIQHYASKEVARRI 83 (265)
T ss_pred EEEEEEEEEEECC---EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCCCcEEEECCEEhhhCCHHHHhhhe
Confidence 6999999999963 4599999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEEecCCCCCc-ccHHHHHccCC-CC------C---CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGK-EV------A---TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~-~~------~---~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
+|+||++.+|. .|++||+.++. +. . .++.++++++..++.++ ......+||||||||+
T Consensus 84 ~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-----------~~~~~~~LS~Gq~qrv 152 (265)
T PRK10253 84 GLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHL-----------ADQSVDTLSGGQRQRA 152 (265)
T ss_pred EEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHH-----------hcCCcccCChHHHHHH
Confidence 99999998875 69999998752 11 0 12234555555554433 3345678999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
+||||++++|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 153 ~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~ 232 (265)
T PRK10253 153 WIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLNQACRYASHLIALREGKIVAQGAPKEIV 232 (265)
T ss_pred HHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999998866 9999999999999999999986
Q ss_pred h
Q 047171 1203 S 1203 (1224)
Q Consensus 1203 ~ 1203 (1224)
.
T Consensus 233 ~ 233 (265)
T PRK10253 233 T 233 (265)
T ss_pred h
Confidence 5
No 287
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=5.2e-41 Score=364.29 Aligned_cols=198 Identities=30% Similarity=0.497 Sum_probs=167.2
Q ss_pred EEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEE
Q 047171 979 ELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIAL 1058 (1224)
Q Consensus 979 ~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1058 (1224)
+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++. .+|++++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~-----~~~~~i~~ 72 (213)
T cd03235 1 EVEDLTVSYGG---HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPTSGSIRVFGKPLE-----KERKRIGY 72 (213)
T ss_pred CcccceeEECC---EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCccHH-----HHHhheEE
Confidence 36899999963 45999999999999999999999999999999999999999999999998764 47889999
Q ss_pred EecCCCC---CcccHHHHHccCCCCC----------CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1059 VSQEPTL---FAGTIRQNIVYGKEVA----------TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1059 V~Qdp~L---F~gTIreNl~~~~~~~----------~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
+||+|.+ |+.|++||+.++.... .++++.++++..++.++. .....+||||||||+
T Consensus 73 v~q~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LSgG~~qrv 141 (213)
T cd03235 73 VPQRRSIDRDFPISVRDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELA-----------DRQIGELSGGQQQRV 141 (213)
T ss_pred eccccccccCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHH-----------hCCcccCCHHHHHHH
Confidence 9999986 5689999998753210 123345555555544332 334567999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
+|||||+++|++|||||||++||+++.+.+.+.|++.. +++|+|+|||+++.+.. ||+|++|++| +++.|
T Consensus 142 ~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~~-~~~~g 213 (213)
T cd03235 142 LLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRREGMTILVVTHDLGLVLEYFDRVLLLNRT-VVASG 213 (213)
T ss_pred HHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEcCc-EeecC
Confidence 99999999999999999999999999999999999875 67899999999999876 9999999886 66654
No 288
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.3e-40 Score=381.99 Aligned_cols=217 Identities=29% Similarity=0.484 Sum_probs=182.3
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++ ..+|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..+|+++
T Consensus 41 ~i~i~nl~k~y~~---~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~i 116 (340)
T PRK13536 41 AIDLAGVSKSYGD---KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARI 116 (340)
T ss_pred eEEEEEEEEEECC---EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccE
Confidence 5999999999963 46999999999999999999999999999999999999999999999999987654 5688999
Q ss_pred EEEecCCCCC-cccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1057 ALVSQEPTLF-AGTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1057 ~~V~Qdp~LF-~gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
+|+||++.+| ..|++||+.+... ..+.++..+.++ .+.+. ..+++..++.+ .+||||||||++|||||+.
T Consensus 117 g~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~--~ll~~-~~L~~~~~~~~----~~LS~G~kqrv~lA~aL~~ 189 (340)
T PRK13536 117 GVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIP--SLLEF-ARLESKADARV----SDLSGGMKRRLTLARALIN 189 (340)
T ss_pred EEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHH--HHHHH-cCCchhhCCCh----hhCCHHHHHHHHHHHHHhc
Confidence 9999999986 5799999985322 122222222211 11121 12344445444 4799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
+|++|||||||++||+.+.+.+++.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 190 ~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 190 DPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999999999875 48999999999999976 999999999999999999999764
No 289
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=370.70 Aligned_cols=219 Identities=31% Similarity=0.455 Sum_probs=187.0
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCC--CC
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKS--YN 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~ 1048 (1224)
..|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++| ++|+|.+||.++.. .+
T Consensus 19 ~~l~~~nl~~~~~~---~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~ 95 (274)
T PRK14265 19 SVFEVEGVKVFYGG---FLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQIN 95 (274)
T ss_pred ceEEEeeEEEEeCC---eEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccch
Confidence 36999999999963 3599999999999999999999999999999999999864 58999999999864 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHccCCCC-----CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1049 LRKLRSCIALVSQEPTLFAGTIRQNIVYGKEV-----ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~-----~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
...+|++++|+||++.+|+.|+.|||.++... ..++++.++++.+++.+.+. ......+..|||||||
T Consensus 96 ~~~~~~~i~~v~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~-------~~~~~~~~~LSgGq~q 168 (274)
T PRK14265 96 SVKLRRQVGMVFQRPNPFPKSIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVK-------DKLKEKGTALSGGQQQ 168 (274)
T ss_pred hHHHhhcEEEEccCCccccccHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhH-------HHhcCCcccCCHHHHH
Confidence 45678999999999999989999999875311 11334455566666544332 2234556789999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe---------CCEEE
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIK---------NGKVV 1193 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~---------~G~Iv 1193 (1224)
|++|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||++++|+ +|+++
T Consensus 169 rv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~~~~~~~~G~~~ 248 (274)
T PRK14265 169 RLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKEQYTIIMVTHNMQQASRVADWTAFFNTEIDEYGKRRGKLV 248 (274)
T ss_pred HHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEecccccccccCceEE
Confidence 999999999999999999999999999999999999998778999999999999865 99999997 89999
Q ss_pred EecChhHHhhc
Q 047171 1194 EQGTQSSLLSM 1204 (1224)
Q Consensus 1194 e~Gt~~eLl~~ 1204 (1224)
+.|+++++...
T Consensus 249 ~~g~~~~~~~~ 259 (274)
T PRK14265 249 EFSPTEQMFGS 259 (274)
T ss_pred EeCCHHHHHhC
Confidence 99999999865
No 290
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=369.65 Aligned_cols=218 Identities=27% Similarity=0.404 Sum_probs=188.2
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC-----CCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP-----QSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p-----~~G~I~idG~di~~--~~~ 1049 (1224)
.+.+++++++|. +.++|+|+||+|++||++||+|+||||||||+++|.|+++| ++|+|.+||.++.. .+.
T Consensus 8 ~~~~~~~~~~~~---~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~ 84 (261)
T PRK14263 8 VMDCKLDKIFYG---NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDP 84 (261)
T ss_pred eEEEEeEEEEeC---CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccch
Confidence 488999999995 34699999999999999999999999999999999999986 79999999999864 344
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCCC-----CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKEV-----ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~-----~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQR 1124 (1224)
..+|+.++|+||++.+|..|++|||.++... ...+++.++++.+++.+.+.. ..++...+||||||||
T Consensus 85 ~~~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~-------~~~~~~~~LS~G~~qr 157 (261)
T PRK14263 85 VVVRRYIGMVFQQPNPFSMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKD-------KLKVSGLSLSGGQQQR 157 (261)
T ss_pred HhhhhceEEEecCCccccccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhh-------hhhCCcccCCHHHHHH
Confidence 5678899999999999999999999876321 122456666766665444322 2345677899999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEe--------CCEEEEe
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIK--------NGKVVEQ 1195 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~--------~G~Ive~ 1195 (1224)
++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|+ +|++++.
T Consensus 158 v~laral~~~p~llllDEPtsgLD~~~~~~l~~~l~~~~~~~tii~isH~~~~i~~~~d~v~~l~~~~~~~~~~G~i~~~ 237 (261)
T PRK14263 158 LCIARAIATEPEVLLLDEPCSALDPIATRRVEELMVELKKDYTIALVTHNMQQAIRVADTTAFFSVDISQGTRTGYLVEM 237 (261)
T ss_pred HHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEecccccccCCceEEEe
Confidence 99999999999999999999999999999999999998778899999999998865 99999996 8999999
Q ss_pred cChhHHhhc
Q 047171 1196 GTQSSLLSM 1204 (1224)
Q Consensus 1196 Gt~~eLl~~ 1204 (1224)
|+++++++.
T Consensus 238 g~~~~~~~~ 246 (261)
T PRK14263 238 GPTAQIFQN 246 (261)
T ss_pred CCHHHHHhC
Confidence 999999865
No 291
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=1.3e-40 Score=365.63 Aligned_cols=212 Identities=33% Similarity=0.520 Sum_probs=174.6
Q ss_pred EEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH---HHHh
Q 047171 978 IELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL---RKLR 1053 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~---~~lR 1053 (1224)
|+++||+++|+++. +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.+.+. ..+|
T Consensus 2 l~~~~v~~~~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (228)
T cd03257 2 LEVKNLSVSFPTGGGSVKALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRR 81 (228)
T ss_pred eEEEeeeEeccCCCcceeeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhh
Confidence 78999999996421 1269999999999999999999999999999999999999999999999999987764 5788
Q ss_pred cceEEEecCC--CCC-cccHHHHHccCCC----CCCHHHHHHHHHHHhHHHHHHhcccccc-cccCCCCCCCChHHHHHH
Q 047171 1054 SCIALVSQEP--TLF-AGTIRQNIVYGKE----VATEAEIRKAAVLANAHEFISSTEDGYD-TYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1054 ~~i~~V~Qdp--~LF-~gTIreNl~~~~~----~~~deei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSGGQrQRl 1125 (1224)
++++|+||+| .++ ..|++||+.++.. ...+++...+. .+.+..+ |++ ........+||||||||+
T Consensus 82 ~~i~~~~q~~~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~-----~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv 154 (228)
T cd03257 82 KEIQMVFQDPMSSLNPRMTIGEQIAEPLRIHGKLSKKEARKEAV-----LLLLVGV--GLPEEVLNRYPHELSGGQRQRV 154 (228)
T ss_pred ccEEEEecCchhhcCCcCCHHHHHHHHHHhccCCcHHHHHHHHH-----HHHHHHC--CCChhHhhCCchhcCHHHHHHH
Confidence 9999999999 344 5799999975421 11112111111 1233332 342 345566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
+||||++.+|++|||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 155 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 155 AIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred HHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 999999999999999999999999999999999998764 7899999999999874 9999999999998865
No 292
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.5e-40 Score=370.84 Aligned_cols=212 Identities=28% Similarity=0.451 Sum_probs=182.8
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+|+.++
T Consensus 2 l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 78 (256)
T TIGR03873 2 LRLSRVSWSAGG---RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPDAGTVDLAGVDLHGLSRRARARRVA 78 (256)
T ss_pred ceEEeEEEEECC---EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEEcccCCHHHHhhheE
Confidence 689999999963 46999999999999999999999999999999999999999999999999999888888888999
Q ss_pred EEecCCC-CCcccHHHHHccCCCC-------C---CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHH
Q 047171 1058 LVSQEPT-LFAGTIRQNIVYGKEV-------A---TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIA 1126 (1224)
Q Consensus 1058 ~V~Qdp~-LF~gTIreNl~~~~~~-------~---~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRla 1126 (1224)
|+||++. .+..|++||+.++... . .++++.++++..++.+ ........||||||||++
T Consensus 79 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrl~ 147 (256)
T TIGR03873 79 LVEQDSDTAVPLTVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSH-----------LADRDMSTLSGGERQRVH 147 (256)
T ss_pred EecccCccCCCCCHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHh-----------hhcCCcccCCHHHHHHHH
Confidence 9999985 4568999999875310 0 1123444444444432 333455689999999999
Q ss_pred HHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1127 LARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1127 LARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
||||++.+|++|||||||++||+.+...+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 148 la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 226 (256)
T TIGR03873 148 VARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAATGVTVVAALHDLNLAASYCDHVVVLDGGRVVAAGPPREVLT 226 (256)
T ss_pred HHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCEEEecCHHHhhC
Confidence 9999999999999999999999999999999999875 47899999999999955 99999999999999999998864
No 293
>cd03246 ABCC_Protease_Secretion This family represents the ABC component of the protease secretion system PrtD, a 60-kDa integral membrane protein sharing 37% identity with HlyB, the ABC component of the alpha-hemolysin secretion pathway, in the C-terminal domain. They export degradative enzymes by using a type I protein secretion system and lack an N-terminal signal peptide, but contain a C-terminal secretion signal. The Type I secretion apparatus is made up of three components, an ABC transporter, a membrane fusion protein (MFP), and an outer membrane protein (OMP). For the HlyA transporter complex, HlyB (ABC transporter) and HlyD (MFP) reside in the inner membrane of E. coli. The OMP component is TolC, which is thought to interact with the MFP to form a continuous channel across the periplasm from the cytoplasm to the exterior. HlyB belongs to the family of ABC transporters, which are ubiquitous, ATP-dependent transmembrane pumps or channels. The spectrum of transport substra
Probab=100.00 E-value=1.1e-40 Score=348.61 Aligned_cols=172 Identities=41% Similarity=0.715 Sum_probs=162.3
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++. +.++++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.+||.++.+.+...+|++++
T Consensus 1 i~~~~l~~~~~~~-~~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (173)
T cd03246 1 LEVENVSFRYPGA-EPPVLRNVSFSIEPGESLAIIGPSGSGKSTLARLILGLLRPTSGRVRLDGADISQWDPNELGDHVG 79 (173)
T ss_pred CEEEEEEEEcCCC-CCcceeeeEEEECCCCEEEEECCCCCCHHHHHHHHHhccCCCCCeEEECCEEcccCCHHHHHhheE
Confidence 5789999999742 246999999999999999999999999999999999999999999999999999988889999999
Q ss_pred EEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 047171 1058 LVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMI 1137 (1224)
Q Consensus 1058 ~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~I 1137 (1224)
|++|+|.+|+.|++||+ ||||||||++||||++++|++
T Consensus 80 ~~~q~~~~~~~tv~~~l------------------------------------------LS~G~~qrv~la~al~~~p~~ 117 (173)
T cd03246 80 YLPQDDELFSGSIAENI------------------------------------------LSGGQRQRLGLARALYGNPRI 117 (173)
T ss_pred EECCCCccccCcHHHHC------------------------------------------cCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEeCCEE
Q 047171 1138 LLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQKADNIVVIKNGKV 1192 (1224)
Q Consensus 1138 LlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~aD~I~vl~~G~I 1192 (1224)
|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||+|++|++|++
T Consensus 118 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~G~i 173 (173)
T cd03246 118 LVLDEPNSHLDVEGERALNQAIAALKAAGATRIVIAHRPETLASADRILVLEDGRV 173 (173)
T ss_pred EEEECCccccCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhCCEEEEEECCCC
Confidence 99999999999999999999998875 47899999999999988999999999974
No 294
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-40 Score=370.39 Aligned_cols=219 Identities=30% Similarity=0.485 Sum_probs=185.9
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC-----CceEEECCccCCC--CC
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ-----SGSVMVDERNIKS--YN 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--~~ 1048 (1224)
+.|+++||+++|++ .++|+|+||+|++||.+||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+
T Consensus 6 ~~l~~~nl~~~~~~---~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g~~i~~~~~~ 82 (261)
T PRK14258 6 PAIKVNNLSFYYDT---QKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFNQNIYERRVN 82 (261)
T ss_pred ceEEEeeEEEEeCC---eeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECCEEhhccccc
Confidence 36999999999963 35899999999999999999999999999999999999985 8999999998753 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHccCCC--C-CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHH
Q 047171 1049 LRKLRSCIALVSQEPTLFAGTIRQNIVYGKE--V-ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQ 1121 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~-~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQ 1121 (1224)
...+|+.++|+||++.+|..|++||+.++.. . .++ +.+.++++..++.+++. ...+..+.+|||||
T Consensus 83 ~~~~~~~i~~~~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~-------~~~~~~~~~LSgGq 155 (261)
T PRK14258 83 LNRLRRQVSMVHPKPNLFPMSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIK-------HKIHKSALDLSGGQ 155 (261)
T ss_pred hHHhhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhh-------hHhcCCcccCCHHH
Confidence 5678899999999999999999999986421 1 122 23445555555544332 23455667899999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeC-----CEEE
Q 047171 1122 KQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKN-----GKVV 1193 (1224)
Q Consensus 1122 rQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~-----G~Iv 1193 (1224)
|||++||||++++|++|||||||++||+++...+.+.|+++. .++|+|+|||+++.+.. ||+|++|++ |+++
T Consensus 156 ~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~~i~~~~d~i~~l~~~~~~~G~i~ 235 (261)
T PRK14258 156 QQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLHQVSRLSDFTAFFKGNENRIGQLV 235 (261)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHhcCEEEEEccCCCcCceEE
Confidence 999999999999999999999999999999999999999854 48999999999999876 999999999 9999
Q ss_pred EecChhHHhhc
Q 047171 1194 EQGTQSSLLSM 1204 (1224)
Q Consensus 1194 e~Gt~~eLl~~ 1204 (1224)
+.|+++++...
T Consensus 236 ~~~~~~~~~~~ 246 (261)
T PRK14258 236 EFGLTKKIFNS 246 (261)
T ss_pred EeCCHHHHHhC
Confidence 99999999765
No 295
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.6e-40 Score=359.98 Aligned_cols=201 Identities=31% Similarity=0.482 Sum_probs=172.5
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++. . .|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .|++++
T Consensus 1 i~~~~l~~~~~~~---~--~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 73 (211)
T cd03298 1 VRLDKIRFSYGEQ---P--MHFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVS 73 (211)
T ss_pred CEEEeEEEEeCCE---e--cceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEE
Confidence 5799999999632 2 39999999999999999999999999999999999999999999999877654 467899
Q ss_pred EEecCCCCCcc-cHHHHHccCCC-C-----CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFAG-TIRQNIVYGKE-V-----ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~g-TIreNl~~~~~-~-----~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||++.+|.+ |++||+.++.. . .+++++.++++..++.+.... ...+||||||||++||||
T Consensus 74 ~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrv~ia~a 142 (211)
T cd03298 74 MLFQENNLFAHLTVEQNVGLGLSPGLKLTAEDRQAIEVALARVGLAGLEKR-----------LPGELSGGERQRVALARV 142 (211)
T ss_pred EEecccccCCCCcHHHHHhcccccccCccHHHHHHHHHHHHHcCCHHHHhC-----------CcccCCHHHHHHHHHHHH
Confidence 99999999975 99999987532 1 123456666666666554433 334799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
++++|++|||||||++||+++.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|
T Consensus 143 l~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 143 LVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 999999999999999999999999999999875 37899999999999966 9999999999998765
No 296
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.8e-40 Score=364.03 Aligned_cols=208 Identities=26% Similarity=0.377 Sum_probs=175.2
Q ss_pred cEEEEEEEEECCCCCC-ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH---H
Q 047171 977 FIELKNVFFSYPSRPD-QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK---L 1052 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~---l 1052 (1224)
.|+++|++++|++... .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... +
T Consensus 6 ~l~~~~l~~~~~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~ 85 (228)
T PRK10584 6 IVEVHHLKKSVGQGEHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGSSGEVSLVGQPLHQMDEEARAKL 85 (228)
T ss_pred eEEEeeeEEEccCCCcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCeeEEECCEEcccCCHHHHHHH
Confidence 5899999999974211 35999999999999999999999999999999999999999999999999998877653 3
Q ss_pred -hcceEEEecCCCCCc-ccHHHHHccCC--CCCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHH
Q 047171 1053 -RSCIALVSQEPTLFA-GTIRQNIVYGK--EVAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQR 1124 (1224)
Q Consensus 1053 -R~~i~~V~Qdp~LF~-gTIreNl~~~~--~~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQR 1124 (1224)
+++++|+||+|.+|. .|++||+.++. ...+ .+++.++++..++.++. ......||||||||
T Consensus 86 ~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~Ge~qr 154 (228)
T PRK10584 86 RAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRL-----------DHLPAQLSGGEQQR 154 (228)
T ss_pred HhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHh-----------hCChhhCCHHHHHH
Confidence 368999999999887 49999997632 1111 23344555555544433 33345799999999
Q ss_pred HHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEEEEe
Q 047171 1125 IALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQKADNIVVIKNGKVVEQ 1195 (1224)
Q Consensus 1125 laLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~aD~I~vl~~G~Ive~ 1195 (1224)
++|||||+++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+..||++++|++|+++|.
T Consensus 155 l~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~i~~l~~g~i~~~ 227 (228)
T PRK10584 155 VALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQLAARCDRRLRLVNGQLQEE 227 (228)
T ss_pred HHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEec
Confidence 9999999999999999999999999999999999988742 7899999999999988999999999999874
No 297
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1.6e-40 Score=362.72 Aligned_cols=204 Identities=27% Similarity=0.451 Sum_probs=172.3
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH---Hhc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK---LRS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~---lR~ 1054 (1224)
|+++|++++|+. +.++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++.+++... +|+
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~ 79 (222)
T PRK10908 2 IRFEHVSKAYLG--GRQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPSAGKIWFSGHDITRLKNREVPFLRR 79 (222)
T ss_pred EEEEeeEEEecC--CCeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEcccCChhHHHHHHh
Confidence 789999999952 246999999999999999999999999999999999999999999999999998776543 788
Q ss_pred ceEEEecCCCC-CcccHHHHHccCC--CCCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1055 CIALVSQEPTL-FAGTIRQNIVYGK--EVATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1055 ~i~~V~Qdp~L-F~gTIreNl~~~~--~~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
.++|+||+|.+ +..|++||+.++. ...++++ +.++++..++.+ .......+||||||||++|
T Consensus 80 ~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~LS~G~~qrv~l 148 (222)
T PRK10908 80 QIGMIFQDHHLLMDRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLD-----------KAKNFPIQLSGGEQQRVGI 148 (222)
T ss_pred heEEEecCccccccccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChh-----------hhhCCchhCCHHHHHHHHH
Confidence 99999999987 4679999998752 1223333 333344433333 2334456899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVE 1194 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive 1194 (1224)
|||++++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|+++.
T Consensus 149 aral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~ 217 (222)
T PRK10908 149 ARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNRVGVTVLMATHDIGLISRRSYRMLTLSDGHLHG 217 (222)
T ss_pred HHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEcc
Confidence 999999999999999999999999999999999875 47899999999999976 99999999999853
No 298
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=7.5e-41 Score=342.76 Aligned_cols=212 Identities=36% Similarity=0.577 Sum_probs=176.7
Q ss_pred cEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCC---HHHHhcc
Q 047171 327 EIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQ---LKWLRSQ 392 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~~ 392 (1224)
.|+++||+..||+. ++++++||+|+||||||||++.|.|+.+|++|+|.++|.++..++ ...+|++
T Consensus 3 ~i~~~nl~k~yp~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t~G~i~~~g~~i~~~~~k~lr~~r~~ 82 (258)
T COG3638 3 MIEVKNLSKTYPGGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPTSGEILFNGVQITKLKGKELRKLRRD 82 (258)
T ss_pred eEEEeeeeeecCCCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCCcceEEecccchhccchHHHHHHHHh
Confidence 37888888888643 467899999999999999999999999999999999999998887 4556789
Q ss_pred cEEecCCCCCCcc-cHHHHHhcCCCCCCH--HH---HHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHH
Q 047171 393 MGLVNQEPILFST-SIKENILIGKPGASM--ET---VVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIAR 466 (1224)
Q Consensus 393 i~~v~Q~~~lf~~-ti~~ni~~g~~~~~~--~~---~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiAR 466 (1224)
|||++|++.|.+. ||.+|++.|+-+... .- +....+...+.+-++++ |+....-.+..+|||||+|||+|||
T Consensus 83 iGmIfQ~~nLv~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLerv--gi~~~A~qra~~LSGGQQQRVaIAR 160 (258)
T COG3638 83 IGMIFQQFNLVPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERV--GILDKAYQRASTLSGGQQQRVAIAR 160 (258)
T ss_pred ceeEeccCCcccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHc--CcHHHHHHHhccCCcchhHHHHHHH
Confidence 9999999999876 999999988643210 00 00011222233445555 5555667788999999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHH--cCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 467 ALIRDPKILLLDEATSALDAESERIVQEALDQA--SQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 467 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~--~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
||+++|+|++-|||+|+|||.+.+.+++.|++. ..|.|+|+.-|.++.+++ ||||+-|++|+|+..|+.+|+-+
T Consensus 161 aL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdlA~~Y~~Riigl~~G~ivfDg~~~el~~ 237 (258)
T COG3638 161 ALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDLAKKYADRIIGLKAGRIVFDGPASELTD 237 (258)
T ss_pred HHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHHHHHHHhhheEecCCcEEEeCChhhhhH
Confidence 999999999999999999999999999999875 468999999999999976 99999999999999999999643
No 299
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.3e-40 Score=368.98 Aligned_cols=224 Identities=27% Similarity=0.431 Sum_probs=184.3
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC-----CceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ-----SGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~-----~G~I~idG~di~~--~~~ 1049 (1224)
.++++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|+ +|+|.+||.++.. .+.
T Consensus 4 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~ 80 (252)
T PRK14272 4 LLSAQDVNIYYGD---KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDP 80 (252)
T ss_pred EEEEeeeEEEECC---EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCH
Confidence 4789999999963 46999999999999999999999999999999999999874 8999999999864 345
Q ss_pred HHHhcceEEEecCCCCCc-ccHHHHHccCCC--CC-CHHHHHHH----HHHHhHHHHHHhcccccccccCCCCCCCChHH
Q 047171 1050 RKLRSCIALVSQEPTLFA-GTIRQNIVYGKE--VA-TEAEIRKA----AVLANAHEFISSTEDGYDTYCGERGVQLSGGQ 1121 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~~--~~-~deei~~a----l~~a~l~~~I~~lp~gldt~vge~G~~LSGGQ 1121 (1224)
..+|+.++|+||++.+|. .|++||+.++.. .. .+++..+. ++..++.+. ++..++ ....+|||||
T Consensus 81 ~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~---l~~~~~----~~~~~LS~G~ 153 (252)
T PRK14272 81 VAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDE---VKDRLK----TPATGLSGGQ 153 (252)
T ss_pred HHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchh---hhhhhc----CCcccCCHHH
Confidence 578899999999999988 599999986431 11 23333322 222222221 122233 3456799999
Q ss_pred HHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhH
Q 047171 1122 KQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSS 1200 (1224)
Q Consensus 1122 rQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~e 1200 (1224)
|||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|++++
T Consensus 154 ~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~ 233 (252)
T PRK14272 154 QQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKKVTTIIIVTHNMHQAARVSDTTSFFLVGDLVEHGPTDQ 233 (252)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 99999999999999999999999999999999999999988778999999999999886 99999999999999999999
Q ss_pred HhhcCCCchhH
Q 047171 1201 LLSMGNGGAYY 1211 (1224)
Q Consensus 1201 Ll~~~~~g~y~ 1211 (1224)
++.. +...|.
T Consensus 234 ~~~~-~~~~~~ 243 (252)
T PRK14272 234 LFTN-PRDERT 243 (252)
T ss_pred HHhC-cCcHHH
Confidence 9875 334343
No 300
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-40 Score=362.87 Aligned_cols=209 Identities=32% Similarity=0.476 Sum_probs=180.4
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++||+++|+. . ..|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. .++.++
T Consensus 2 l~~~~l~~~~~~---~--~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~ 74 (232)
T PRK10771 2 LKLTDITWLYHH---L--PMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPP--SRRPVS 74 (232)
T ss_pred eEEEEEEEEECC---c--cceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCCh--hhccEE
Confidence 789999999963 2 249999999999999999999999999999999999999999999999876654 367899
Q ss_pred EEecCCCCCcc-cHHHHHccCC-CC-----CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFAG-TIRQNIVYGK-EV-----ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~g-TIreNl~~~~-~~-----~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||++.+|.+ |++||+.++. +. ..++++.++++..++.+++.+. ...||||||||++||||
T Consensus 75 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----------~~~LS~G~~qrv~lara 143 (232)
T PRK10771 75 MLFQENNLFSHLTVAQNIGLGLNPGLKLNAAQREKLHAIARQMGIEDLLARL-----------PGQLSGGQRQRVALARC 143 (232)
T ss_pred EEecccccccCCcHHHHHhcccccccCCCHHHHHHHHHHHHHcCcHHHHhCC-----------cccCCHHHHHHHHHHHH
Confidence 99999999975 9999998642 11 1234566667766665554433 34799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
++++|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 144 l~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 144 LVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred HhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999998753 7899999999999866 999999999999999999999864
No 301
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=4.8e-40 Score=363.15 Aligned_cols=211 Identities=67% Similarity=1.005 Sum_probs=191.6
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccH
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSI 407 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti 407 (1224)
..++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+....++.++|++|++.+|+.|+
T Consensus 17 ~~l~~i~~~i~---~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv 93 (238)
T cd03249 17 PILKGLSLTIP---PGKTVALVGSSGCGKSTVVSLLERFYDPTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFDGTI 93 (238)
T ss_pred cceeceEEEec---CCCEEEEEeCCCCCHHHHHHHHhccCCCCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhhhhH
Confidence 35677777764 567999999999999999999999999999999999999987777777888999999999998999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHH
Q 047171 408 KENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAE 487 (1224)
Q Consensus 408 ~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~ 487 (1224)
+||+.++.+....+++.+.++..++.+++..+|.|+++..+....+||||||||++|||||+.+|++|||||||++||+.
T Consensus 94 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~ 173 (238)
T cd03249 94 AENIRYGKPDATDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAE 173 (238)
T ss_pred HHHhhccCCCCCHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHH
Confidence 99999876554556666677777888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 488 SERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 488 ~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+.+.+.+.|+++.+|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 174 ~~~~l~~~l~~~~~g~~vi~~sh~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 227 (238)
T cd03249 174 SEKLVQEALDRAMKGRTTIVIAHRLSTIRNADLIAVLQNGQVVEQGTHDELMAQ 227 (238)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEEeCCHHHHhhc
Confidence 999999999887778999999999999988999999999999999999888764
No 302
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-40 Score=360.59 Aligned_cols=205 Identities=25% Similarity=0.500 Sum_probs=171.2
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~----~~~~~i~ 73 (210)
T cd03269 1 LEVENVTKRFGR---VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPDSGEVLFDGKPLDI----AARNRIG 73 (210)
T ss_pred CEEEEEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCCchhH----HHHccEE
Confidence 578999999963 469999999999999999999999999999999999999999999999998753 5678999
Q ss_pred EEecCCCCCc-ccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
|+||++.+|. .|++||+.++.. ..+..+.. ..+.+++..+ |++........+||||||||++||||++.+
T Consensus 74 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~ 146 (210)
T cd03269 74 YLPEERGLYPKMKVIDQLVYLAQLKGLKKEEAR-----RRIDEWLERL--ELSEYANKRVEELSKGNQQKVQFIAAVIHD 146 (210)
T ss_pred EeccCCcCCcCCcHHHHHHHHHHHcCCChHHHH-----HHHHHHHHHc--CChHHHhCcHhhCCHHHHHHHHHHHHHhcC
Confidence 9999999987 499999976421 11111111 1122333333 344444556678999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++.|
T Consensus 147 p~~lllDEP~~~LD~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~ 210 (210)
T cd03269 147 PELLILDEPFSGLDPVNVELLKDVIRELARAGKTVILSTHQMELVEELCDRVLLLNKGRAVLYG 210 (210)
T ss_pred CCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhhhEEEEEeCCEEEecC
Confidence 99999999999999999999999998875 47899999999999865 9999999999998865
No 303
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=355.96 Aligned_cols=208 Identities=35% Similarity=0.582 Sum_probs=178.4
Q ss_pred cEEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecC-CCCHHHHhcccE
Q 047171 327 EIEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIK-KLQLKWLRSQMG 394 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~-~~~~~~~r~~i~ 394 (1224)
-++++|++|+|+++ ++++.++|+|+||||||||+++|.|+++|++|.|.++|.++. ..+...+|+++|
T Consensus 3 ~i~~~~l~~~y~~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~~G~v~~~g~~~~~~~~~~~~~~~vG 82 (235)
T COG1122 3 MIEAENLSFRYPGRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPTSGEVLVDGLDTSSEKSLLELRQKVG 82 (235)
T ss_pred eEEEEEEEEEcCCCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCCCCEEEECCeeccchhhHHHhhcceE
Confidence 37788888888754 246699999999999999999999999999999999999998 478899999999
Q ss_pred EecCCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 395 LVNQEP--ILFSTSIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 395 ~v~Q~~--~lf~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
||+|+| .+|..||.|.++||..+ .+.+++.+..+ +.++.+ |+.....+...+||||||||+|||.+|+.
T Consensus 83 ~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~-----~~l~~v--gl~~~~~r~p~~LSGGqkqRvaIA~vLa~ 155 (235)
T COG1122 83 LVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVA-----EALELV--GLEELLDRPPFNLSGGQKQRVAIAGVLAM 155 (235)
T ss_pred EEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHH-----HHHHHc--CchhhccCCccccCCcceeeHHhhHHHHc
Confidence 999999 79999999999999753 33444333222 222222 44444667789999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|++||||||||+||+...+.+.+.++++.+ |+|+|++||+++.+.. ||++++|++|+++.+|+++++.+.
T Consensus 156 ~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~~~~~~ad~v~vl~~G~i~~~g~p~~i~~~ 229 (235)
T COG1122 156 GPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLELVLEYADRVVVLDDGKILADGDPAEIFND 229 (235)
T ss_pred CCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHHHHHhhCCEEEEEECCEEeecCCHHHHhhh
Confidence 9999999999999999999999999998763 5899999999999987 999999999999999999998765
No 304
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-40 Score=367.47 Aligned_cols=227 Identities=26% Similarity=0.429 Sum_probs=187.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECC------ccCCCCCHH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDE------RNIKSYNLR 1050 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG------~di~~~~~~ 1050 (1224)
.|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++| .++.+.+..
T Consensus 10 ~i~~~~~~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g~~~~~~~~~ 86 (257)
T PRK14246 10 VFNISRLYLYIND---KAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFGKDIFQIDAI 86 (257)
T ss_pred heeeeeEEEecCC---ceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECCcccccCCHH
Confidence 5999999999963 4689999999999999999999999999999999999999997666554 677777778
Q ss_pred HHhcceEEEecCCCCCcc-cHHHHHccCCC--CC-CHHHH----HHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1051 KLRSCIALVSQEPTLFAG-TIRQNIVYGKE--VA-TEAEI----RKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp~LF~g-TIreNl~~~~~--~~-~deei----~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
.+|++++|+||+|.+|.+ |++||+.++.. .. ++++. .++++..++.+++ .......+..||||||
T Consensus 87 ~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~LS~G~~ 159 (257)
T PRK14246 87 KLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEV-------YDRLNSPASQLSGGQQ 159 (257)
T ss_pred HHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccc-------hhhhcCCcccCCHHHH
Confidence 889999999999999875 99999986532 11 22333 3333333332221 1223456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|++|||||||++||..++..+.+.|.++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 160 qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiilvsh~~~~~~~~~d~v~~l~~g~i~~~g~~~~~ 239 (257)
T PRK14246 160 QRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKNEIAIVIVSHNPQQVARVADYVAFLYNGELVEWGSSNEI 239 (257)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCcEEEEEECCHHHHHHhCCEEEEEECCEEEEECCHHHH
Confidence 9999999999999999999999999999999999999988778999999999999954 999999999999999999999
Q ss_pred hhcCCCchhHHHH
Q 047171 1202 LSMGNGGAYYSLI 1214 (1224)
Q Consensus 1202 l~~~~~g~y~~l~ 1214 (1224)
... +...|.+.+
T Consensus 240 ~~~-~~~~~~~~~ 251 (257)
T PRK14246 240 FTS-PKNELTEKY 251 (257)
T ss_pred HhC-CCcHHHHHH
Confidence 875 344455443
No 305
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.4e-40 Score=368.69 Aligned_cols=218 Identities=28% Similarity=0.451 Sum_probs=183.4
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC--C---CCceEEECCccCCC--CCH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD--P---QSGSVMVDERNIKS--YNL 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~--p---~~G~I~idG~di~~--~~~ 1049 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++ | ++|+|.+||.++.. .+.
T Consensus 5 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~ 81 (252)
T PRK14255 5 IITSSDVHLFYGK---FEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRGQNIYAPNEDV 81 (252)
T ss_pred eEEEEeEEEEECC---eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcCEEcccccccH
Confidence 4899999999963 469999999999999999999999999999999999975 4 58999999998864 345
Q ss_pred HHHhcceEEEecCCCCCcccHHHHHccCCC--CC-C----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHH
Q 047171 1050 RKLRSCIALVSQEPTLFAGTIRQNIVYGKE--VA-T----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQK 1122 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~--~~-~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQr 1122 (1224)
..+|++++|+||++.+|..|+++|+.++.. .. . ++++.++++.+++.+. +.........+||||||
T Consensus 82 ~~~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------i~~~~~~~~~~LS~Gq~ 154 (252)
T PRK14255 82 VQLRKQVGMVFQQPNPFPFSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDE-------VKDHLHESALSLSGGQQ 154 (252)
T ss_pred HHhcCeEEEEECCCccCCCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccc-------hhhHHhcCcccCCHHHH
Confidence 567889999999999999999999986421 11 1 1233334444443322 22234456678999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
||++||||++++|++|||||||++||+.+.+.+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|++.++
T Consensus 155 qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 234 (252)
T PRK14255 155 QRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRDQYTIILVTHSMHQASRISDKTAFFLTGNLIEFADTKQM 234 (252)
T ss_pred HHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHH
Confidence 9999999999999999999999999999999999999988767899999999999865 999999999999999999999
Q ss_pred hhc
Q 047171 1202 LSM 1204 (1224)
Q Consensus 1202 l~~ 1204 (1224)
...
T Consensus 235 ~~~ 237 (252)
T PRK14255 235 FLN 237 (252)
T ss_pred hcC
Confidence 865
No 306
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-40 Score=371.83 Aligned_cols=214 Identities=30% Similarity=0.538 Sum_probs=180.9
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCC--CCHHHHhcc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKS--YNLRKLRSC 1055 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~--~~~~~lR~~ 1055 (1224)
|+++||+++|+. ..++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.+||.++.. .+...+|++
T Consensus 2 l~~~~l~~~~~~--~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 79 (275)
T PRK13639 2 LETRDLKYSYPD--GTEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPTSGEVLIKGEPIKYDKKSLLEVRKT 79 (275)
T ss_pred EEEEEEEEEeCC--CCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCEECccccchHHHHHhh
Confidence 789999999963 2459999999999999999999999999999999999999999999999999852 334568899
Q ss_pred eEEEecCC--CCCcccHHHHHccCCC--CCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1056 IALVSQEP--TLFAGTIRQNIVYGKE--VATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1056 i~~V~Qdp--~LF~gTIreNl~~~~~--~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
|+|+||+| .+|..|++||+.++.. ..+.+ ++.++++..++.+ .......+||||||||++|
T Consensus 80 i~~v~q~~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~-----------~~~~~~~~LS~Gq~qrv~l 148 (275)
T PRK13639 80 VGIVFQNPDDQLFAPTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEG-----------FENKPPHHLSGGQKKRVAI 148 (275)
T ss_pred eEEEeeChhhhhccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCch-----------hhcCChhhCCHHHHHHHHH
Confidence 99999998 5788999999986521 12222 2333444443322 2233456799999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|||++.+|++|||||||++||+.+...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 149 aral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~~til~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 227 (275)
T PRK13639 149 AGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNKEGITIIISTHDVDLVPVYADKVYVMSDGKIIKEGTPKEVFSD 227 (275)
T ss_pred HHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999999999875 47899999999999875 999999999999999999998763
No 307
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-40 Score=375.87 Aligned_cols=219 Identities=30% Similarity=0.498 Sum_probs=186.4
Q ss_pred ccEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-----CCCceEEECCccCCC--CC
Q 047171 976 GFIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-----PQSGSVMVDERNIKS--YN 1048 (1224)
Q Consensus 976 g~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-----p~~G~I~idG~di~~--~~ 1048 (1224)
..|+++||+++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++ |++|+|.+||.++.. .+
T Consensus 44 ~~l~i~nl~~~~~~---~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g~~i~~~~~~ 120 (305)
T PRK14264 44 AKLSVEDLDVYYGD---DHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDGQDIYQDGVN 120 (305)
T ss_pred ceEEEEEEEEEeCC---eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccc
Confidence 46999999999963 469999999999999999999999999999999999986 689999999999865 34
Q ss_pred HHHHhcceEEEecCCCCCcccHHHHHccCCCC-------------------CCHHHHHHHHHHHhHHHHHHhcccccccc
Q 047171 1049 LRKLRSCIALVSQEPTLFAGTIRQNIVYGKEV-------------------ATEAEIRKAAVLANAHEFISSTEDGYDTY 1109 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~-------------------~~deei~~al~~a~l~~~I~~lp~gldt~ 1109 (1224)
...+|++++|+||++.+|++|++||+.++... ..++++.++++..++ +.++++.
T Consensus 121 ~~~~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~~~ 193 (305)
T PRK14264 121 LVELRKRVGMVFQSPNPFPKSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAAL-------WDEVNDR 193 (305)
T ss_pred HHHHhhceEEEccCCccccccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCC-------chhhhHH
Confidence 56788999999999999999999999875211 012233444444433 2234455
Q ss_pred cCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhh-cCEE-EEE
Q 047171 1110 CGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQK-ADNI-VVI 1187 (1224)
Q Consensus 1110 vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~-aD~I-~vl 1187 (1224)
....+.+||||||||++|||||+++|+||||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+| ++|
T Consensus 194 ~~~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~i~~~~d~i~~~l 273 (305)
T PRK14264 194 LDDNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAEEYTVVVVTHNMQQAARISDQTAVFL 273 (305)
T ss_pred hcCccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEe
Confidence 66778899999999999999999999999999999999999999999999998777899999999999866 9997 567
Q ss_pred eCCEEEEecChhHHhhc
Q 047171 1188 KNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1188 ~~G~Ive~Gt~~eLl~~ 1204 (1224)
++|++++.|+++++.+.
T Consensus 274 ~~G~i~~~g~~~~~~~~ 290 (305)
T PRK14264 274 TGGELVEYDDTDKIFEN 290 (305)
T ss_pred cCCEEEEeCCHHHHHhC
Confidence 99999999999999764
No 308
>cd03244 ABCC_MRP_domain2 Domain 2 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminus, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resistance lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=5.8e-40 Score=358.40 Aligned_cols=207 Identities=40% Similarity=0.605 Sum_probs=188.3
Q ss_pred cEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccE
Q 047171 327 EIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMG 394 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 394 (1224)
.|+++|++++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+++.++
T Consensus 2 ~l~~~~l~~~~~~~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 81 (221)
T cd03244 2 DIEFKNVSLRYRPNLPPVLKNISFSIKPGEKVGIVGRTGSGKSSLLLALFRLVELSSGSILIDGVDISKIGLHDLRSRIS 81 (221)
T ss_pred cEEEEEEEEecCCCCcccccceEEEECCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhHhCCHHHHhhhEE
Confidence 46666666666421 246699999999999999999999999999999999999998888888899999
Q ss_pred EecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 395 LVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 395 ~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
|++|++.+|+.|++||+.+..+ ...+++.++++..++.+++.++|.|+++..++.+.+||||||||++|||||+.+|++
T Consensus 82 ~~~q~~~l~~~tv~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~~~~LS~G~~qr~~laral~~~p~l 160 (221)
T cd03244 82 IIPQDPVLFSGTIRSNLDPFGE-YSDEELWQALERVGLKEFVESLPGGLDTVVEEGGENLSVGQRQLLCLARALLRKSKI 160 (221)
T ss_pred EECCCCccccchHHHHhCcCCC-CCHHHHHHHHHHhCcHHHHHhcccccccccccCCCcCCHHHHHHHHHHHHHhcCCCE
Confidence 9999999999999999987643 456778888888899999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecC
Q 047171 475 LLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGS 534 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~ 534 (1224)
+||||||++||+.+...+.+.|+++.+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 161 lllDEP~~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~~~~~~~ 220 (221)
T cd03244 161 LVLDEATASVDPETDALIQKTIREAFKDCTVLTIAHRLDTIIDSDRILVLDKGRVVEFDS 220 (221)
T ss_pred EEEeCccccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCeEEecCC
Confidence 999999999999999999999998877899999999999998899999999999998875
No 309
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=4.2e-40 Score=367.65 Aligned_cols=226 Identities=25% Similarity=0.431 Sum_probs=185.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCcc-----CCCCCHHH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERN-----IKSYNLRK 1051 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~~~~~~ 1051 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.+ +.+.+...
T Consensus 6 ~l~~~~l~~~~~~---~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~i~~~~~~~ 82 (258)
T PRK11701 6 LLSVRGLTKLYGP---RKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPDAGEVHYRMRDGQLRDLYALSEAE 82 (258)
T ss_pred eEEEeeeEEEcCC---ceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCccccccccccCCHHH
Confidence 4899999999963 369999999999999999999999999999999999999999999999998 77766554
Q ss_pred ----HhcceEEEecCCC--CC-cccHHHHHccCC---CCCCHHHHHHHHHHHhHHHHHHhcccccc-cccCCCCCCCChH
Q 047171 1052 ----LRSCIALVSQEPT--LF-AGTIRQNIVYGK---EVATEAEIRKAAVLANAHEFISSTEDGYD-TYCGERGVQLSGG 1120 (1224)
Q Consensus 1052 ----lR~~i~~V~Qdp~--LF-~gTIreNl~~~~---~~~~deei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSGG 1120 (1224)
+|+.++||||++. ++ ..|+.+|+.+.. ...+..++.+ .+.+++..++ ++ +.....+.+||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~l~~~~--l~~~~~~~~~~~LS~G 155 (258)
T PRK11701 83 RRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRA-----TAGDWLERVE--IDAARIDDLPTTFSGG 155 (258)
T ss_pred HHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHH-----HHHHHHHHcC--CChhHHhCCCccCCHH
Confidence 3668999999984 33 358888886421 1111222221 2345555553 33 3566778899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt 1197 (1224)
||||++||||++++|+||||||||++||+.+.+.+.+.|+++.+ +.|+|+|||+++.+.. ||+|++|++|++++.|+
T Consensus 156 q~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~~~~~~~d~i~~l~~g~i~~~~~ 235 (258)
T PRK11701 156 MQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLAVARLLAHRLLVMKQGRVVESGL 235 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCC
Confidence 99999999999999999999999999999999999999988753 7899999999999975 99999999999999999
Q ss_pred hhHHhhcCCCchhHHH
Q 047171 1198 QSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1198 ~~eLl~~~~~g~y~~l 1213 (1224)
++++... +...|.+.
T Consensus 236 ~~~~~~~-~~~~~~~~ 250 (258)
T PRK11701 236 TDQVLDD-PQHPYTQL 250 (258)
T ss_pred HHHHhcC-CCCHHHHH
Confidence 9999865 23345443
No 310
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.5e-40 Score=383.26 Aligned_cols=210 Identities=30% Similarity=0.439 Sum_probs=181.5
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCC----CHHHHh
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSY----NLRKLR 1053 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~~~~lR 1053 (1224)
|++ |++++|++ . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+. +....|
T Consensus 2 l~~-~l~k~~~~---~-~~-~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~ 75 (352)
T PRK11144 2 LEL-NFKQQLGD---L-CL-TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEK 75 (352)
T ss_pred eEE-EEEEEeCC---E-EE-EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhh
Confidence 567 99999953 2 23 99999999999999999999999999999999999999999999988653 244578
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
++++||||++.+|. .|++||+.++.....++++.++++..++.++ ......+||||||||++|||||+
T Consensus 76 ~~i~~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~l~~~gl~~~-----------~~~~~~~LSgGq~qRvalaraL~ 144 (352)
T PRK11144 76 RRIGYVFQDARLFPHYKVRGNLRYGMAKSMVAQFDKIVALLGIEPL-----------LDRYPGSLSGGEKQRVAIGRALL 144 (352)
T ss_pred CCEEEEcCCcccCCCCcHHHHHHhhhhhhhHHHHHHHHHHcCCchh-----------hhCCcccCCHHHHHHHHHHHHHH
Confidence 89999999999996 6999999987543344556666666555443 33445689999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
++|++||||||||+||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 145 ~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 145 TAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred cCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 99999999999999999999999999998753 7899999999998866 999999999999999999999876
No 311
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.8e-40 Score=368.24 Aligned_cols=212 Identities=26% Similarity=0.441 Sum_probs=183.2
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC--------CceEEECCccCCCCCH
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ--------SGSVMVDERNIKSYNL 1049 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~--------~G~I~idG~di~~~~~ 1049 (1224)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|+ +|+|.+||.++...+.
T Consensus 2 l~~~nl~~~~~~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~ 78 (272)
T PRK13547 2 LTADHLHVARRH---RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDA 78 (272)
T ss_pred eEEEEEEEEECC---EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCH
Confidence 789999999953 46999999999999999999999999999999999999998 9999999999988888
Q ss_pred HHHhcceEEEecCCC-CCcccHHHHHccCCC-C------CCH---HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCC
Q 047171 1050 RKLRSCIALVSQEPT-LFAGTIRQNIVYGKE-V------ATE---AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLS 1118 (1224)
Q Consensus 1050 ~~lR~~i~~V~Qdp~-LF~gTIreNl~~~~~-~------~~d---eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LS 1118 (1224)
..+|+.++|+||++. +|..|++||+.++.. . .+. +.++++++.. |+++..+....+||
T Consensus 79 ~~~~~~~~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS 147 (272)
T PRK13547 79 PRLARLRAVLPQAAQPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALA-----------GATALVGRDVTTLS 147 (272)
T ss_pred HHHHhhcEEecccCCCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHc-----------CcHhhhcCCcccCC
Confidence 888889999999986 678999999987521 1 111 1233333333 45555666778899
Q ss_pred hHHHHHHHHHHHHc---------cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEE
Q 047171 1119 GGQKQRIALARAVL---------KNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVV 1186 (1224)
Q Consensus 1119 GGQrQRlaLARAll---------~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~v 1186 (1224)
||||||++|||||+ .+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||++++
T Consensus 148 gG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~~~~~~~d~i~~ 227 (272)
T PRK13547 148 GGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPNLAARHADRIAM 227 (272)
T ss_pred HHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEE
Confidence 99999999999999 59999999999999999999999999998753 7899999999999865 999999
Q ss_pred EeCCEEEEecChhHHhh
Q 047171 1187 IKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1187 l~~G~Ive~Gt~~eLl~ 1203 (1224)
|++|++++.|++++++.
T Consensus 228 l~~G~i~~~g~~~~~~~ 244 (272)
T PRK13547 228 LADGAIVAHGAPADVLT 244 (272)
T ss_pred EECCeEEEecCHHHHcC
Confidence 99999999999999865
No 312
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=1.5e-40 Score=360.89 Aligned_cols=205 Identities=34% Similarity=0.562 Sum_probs=171.3
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCC--CCHHHHhcc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKS--YNLRKLRSC 1055 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~--~~~~~lR~~ 1055 (1224)
|+++||+++|++ .++|+|+||++++||++||+||||||||||+++|+|+++|++|+|.+||.++.. .+...+|++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (213)
T cd03262 1 IEIKNLHKSFGD---FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPDSGTIIIDGLKLTDDKKNINELRQK 77 (213)
T ss_pred CEEEEEEEEECC---eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccchhHHHHHhc
Confidence 478999999963 459999999999999999999999999999999999999999999999998853 455678899
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCC---CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKE---VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAV 1131 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~---~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAl 1131 (1224)
++|+||+|.+|. .|++||+.++.. ..+.++..+. +.+.+..+ |++........+||||||||++||||+
T Consensus 78 i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al 150 (213)
T cd03262 78 VGMVFQQFNLFPHLTVLENITLAPIKVKGMSKAEAEER-----ALELLEKV--GLADKADAYPAQLSGGQQQRVAIARAL 150 (213)
T ss_pred ceEEecccccCCCCcHHHHHHhHHHHhcCCCHHHHHHH-----HHHHHHHc--CCHhHhhhCccccCHHHHHHHHHHHHH
Confidence 999999999886 699999987521 2222222111 12233332 444444555678999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 047171 1132 LKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKV 1192 (1224)
Q Consensus 1132 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~I 1192 (1224)
+++|++|||||||++||+++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|++
T Consensus 151 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~~~~~~~d~i~~l~~g~i 213 (213)
T cd03262 151 AMNPKVMLFDEPTSALDPELVGEVLDVMKDLAEEGMTMVVVTHEMGFAREVADRVIFMDDGRI 213 (213)
T ss_pred hcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 99999999999999999999999999999875 47899999999999966 999999999975
No 313
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.6e-40 Score=361.81 Aligned_cols=210 Identities=30% Similarity=0.532 Sum_probs=180.3
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|+. ++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.++...+. .|+.++
T Consensus 1 l~~~~l~~~~~~----~~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~~G~v~i~g~~~~~~~~--~~~~i~ 74 (235)
T cd03299 1 LKVENLSKDWKE----FKLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPDSGKILLNGKDITNLPP--EKRDIS 74 (235)
T ss_pred CeeEeEEEEeCC----ceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcCcCCh--hHcCEE
Confidence 578999999962 27999999999999999999999999999999999999999999999999877654 378999
Q ss_pred EEecCCCCCc-ccHHHHHccCCCC--CC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKEV--AT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~~--~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||++.+|. .|++||+.++... .+ ++++.++++..++.+++ .....+||||||||++||||
T Consensus 75 ~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~qrl~lara 143 (235)
T cd03299 75 YVPQNYALFPHMTVYKNIAYGLKKRKVDKKEIERKVLEIAEMLGIDHLL-----------NRKPETLSGGEQQRVAIARA 143 (235)
T ss_pred EEeecCccCCCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHH-----------hcCcccCCHHHHHHHHHHHH
Confidence 9999999885 7999999865321 12 22344455555544433 33446799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
++++|++|+|||||++||+.+.+.+.+.|+++.. ++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 144 l~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 220 (235)
T cd03299 144 LVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDFEEAWALADKVAIMLNGKLIQVGKPEEVFKK 220 (235)
T ss_pred HHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHhC
Confidence 9999999999999999999999999999998753 8999999999999876 999999999999999999999865
No 314
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-40 Score=377.91 Aligned_cols=228 Identities=19% Similarity=0.299 Sum_probs=185.8
Q ss_pred cEEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC----CCCceEEECCccCCCCCHHH
Q 047171 977 FIELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD----PQSGSVMVDERNIKSYNLRK 1051 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~----p~~G~I~idG~di~~~~~~~ 1051 (1224)
.|+++|++++|+.+. ...+|+||||+|++||++||+|+||||||||+++|+|+.+ |++|+|.+||+++.+++.+.
T Consensus 3 ~L~v~~l~~~y~~~~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~ 82 (330)
T PRK15093 3 LLDIRNLTIEFKTSDGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRE 82 (330)
T ss_pred eEEEeeeEEEEeCCCCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHH
Confidence 489999999996432 2469999999999999999999999999999999999986 58999999999998888766
Q ss_pred Hh----cceEEEecCCCC--C-cccHHHHHccCCC---C----C-----CHHHHHHHHHHHhHHHHHHhcccccccccCC
Q 047171 1052 LR----SCIALVSQEPTL--F-AGTIRQNIVYGKE---V----A-----TEAEIRKAAVLANAHEFISSTEDGYDTYCGE 1112 (1224)
Q Consensus 1052 lR----~~i~~V~Qdp~L--F-~gTIreNl~~~~~---~----~-----~deei~~al~~a~l~~~I~~lp~gldt~vge 1112 (1224)
++ ++|+||||+|.. + ..||.+|+..... . . .++++.++++.+++.+.- .....
T Consensus 83 ~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~--------~~~~~ 154 (330)
T PRK15093 83 RRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHK--------DAMRS 154 (330)
T ss_pred HHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChH--------HHHhC
Confidence 53 479999999963 3 3589999863210 0 0 123344555555553210 11234
Q ss_pred CCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeC
Q 047171 1113 RGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKN 1189 (1224)
Q Consensus 1113 ~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~ 1189 (1224)
...+||||||||++|||||+.+|+|||||||||+||+.+...+.+.|+++.+ +.|+|+|||+++.+.. ||+|+||++
T Consensus 155 ~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~~v~~~~dri~vm~~ 234 (330)
T PRK15093 155 FPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQMLSQWADKINVLYC 234 (330)
T ss_pred CchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEEC
Confidence 4568999999999999999999999999999999999999999999998763 7899999999999976 999999999
Q ss_pred CEEEEecChhHHhhcCCCchhHHH
Q 047171 1190 GKVVEQGTQSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1190 G~Ive~Gt~~eLl~~~~~g~y~~l 1213 (1224)
|+|+|.|+++++++. +...|.+.
T Consensus 235 G~ive~g~~~~i~~~-p~~~y~~~ 257 (330)
T PRK15093 235 GQTVETAPSKELVTT-PHHPYTQA 257 (330)
T ss_pred CEEEEECCHHHHHhC-CCCHHHHH
Confidence 999999999999876 45567653
No 315
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=2.5e-40 Score=362.04 Aligned_cols=215 Identities=25% Similarity=0.437 Sum_probs=171.8
Q ss_pred cEEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC---CCCceEEECCccCCCCCHHHH
Q 047171 977 FIELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD---PQSGSVMVDERNIKSYNLRKL 1052 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~~~~l 1052 (1224)
.+.|+||+|+|+... ..++|+|+||+|++||++||+||||||||||+++|.|+++ |++|+|.++|.++. ...+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~---~~~~ 79 (226)
T cd03234 3 VLPWWDVGLKAKNWNKYARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRK---PDQF 79 (226)
T ss_pred cceeecceeeeecCccccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECC---hHHh
Confidence 367999999997532 3579999999999999999999999999999999999999 99999999999875 3567
Q ss_pred hcceEEEecCCCCCcc-cHHHHHccCCCCCCHHHHHHHHHHHhHHH-HHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1053 RSCIALVSQEPTLFAG-TIRQNIVYGKEVATEAEIRKAAVLANAHE-FISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1053 R~~i~~V~Qdp~LF~g-TIreNl~~~~~~~~deei~~al~~a~l~~-~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|++++|+||++.+|.+ |++||+.++..........+.......++ .+..+ +++........+||||||||++||||
T Consensus 80 ~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~lara 157 (226)
T cd03234 80 QKCVAYVRQDDILLPGLTVRETLTYTAILRLPRKSSDAIRKKRVEDVLLRDL--ALTRIGGNLVKGISGGERRRVSIAVQ 157 (226)
T ss_pred cccEEEeCCCCccCcCCcHHHHHHHHHHhhcccccchHHHHHHHHHHHHHhh--cchhhhcccccCcCHHHHHHHHHHHH
Confidence 8999999999999986 99999986421110000000111111111 12111 33333345567899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCc-hhh-hhcCEEEEEeCCEEEEec
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRL-STI-QKADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl-~ti-~~aD~I~vl~~G~Ive~G 1196 (1224)
++++|++|||||||++||+.+...+.+.|++.. +++|+|++||++ +.+ ..||+|++|++|+++++|
T Consensus 158 l~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~g 226 (226)
T cd03234 158 LLWDPKVLILDEPTSGLDSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSSGEIVYSG 226 (226)
T ss_pred HHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999875 478999999998 455 559999999999999876
No 316
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=5.4e-40 Score=365.64 Aligned_cols=227 Identities=26% Similarity=0.386 Sum_probs=184.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC----CCceEEECCccCCCCCHHHH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP----QSGSVMVDERNIKSYNLRKL 1052 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p----~~G~I~idG~di~~~~~~~l 1052 (1224)
.|+++|++++| + .++|+|+||+|++||+++|+|+||||||||+++|+|+++| ++|+|.+||.+++.. +..
T Consensus 4 ~l~~~~l~~~~-~---~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~--~~~ 77 (254)
T PRK10418 4 QIELRNIALQA-A---QPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPC--ALR 77 (254)
T ss_pred EEEEeCeEEEe-c---cceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeecccc--ccc
Confidence 58999999999 2 3599999999999999999999999999999999999999 999999999988632 223
Q ss_pred hcceEEEecCCC-CCc--ccHHHHHccC----CCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1053 RSCIALVSQEPT-LFA--GTIRQNIVYG----KEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1053 R~~i~~V~Qdp~-LF~--gTIreNl~~~----~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
++.++||||++. .|. .|+.+|+... .....+++++++++..++.+. ++.++....+||||||||+
T Consensus 78 ~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~--------~~~~~~~~~~LS~Gq~qrv 149 (254)
T PRK10418 78 GRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENA--------ARVLKLYPFEMSGGMLQRM 149 (254)
T ss_pred cceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCCh--------hhhhhcCCcccCHHHHHHH
Confidence 568999999985 343 5888887532 112233455666655554321 1234566778999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
+|||||+++|+||||||||++||+.+.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 150 ~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 150 MIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMGVVARLADDVAVMSHGRIVEQGDVETLF 229 (254)
T ss_pred HHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHh
Confidence 999999999999999999999999999999999998753 7899999999999865 9999999999999999999998
Q ss_pred hcCCCchhHHHHHHh
Q 047171 1203 SMGNGGAYYSLIKMQ 1217 (1224)
Q Consensus 1203 ~~~~~g~y~~l~~~q 1217 (1224)
+......+..++..+
T Consensus 230 ~~~~~~~~~~~~~~~ 244 (254)
T PRK10418 230 NAPKHAVTRSLVSAH 244 (254)
T ss_pred hCCCCHHHHHHHHhh
Confidence 752223455566544
No 317
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5.4e-40 Score=375.73 Aligned_cols=203 Identities=32% Similarity=0.569 Sum_probs=170.3
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH---HhcccEEecCCCCCCc-
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW---LRSQMGLVNQEPILFS- 404 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r~~i~~v~Q~~~lf~- 404 (1224)
.++||||..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++..++... .|++||||+|++.+|+
T Consensus 20 ~L~~vsl~i~---~Gei~gIiG~sGaGKSTLlr~I~gl~~p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~~ 96 (343)
T TIGR02314 20 ALNNVSLHVP---AGQIYGVIGASGAGKSTLIRCVNLLERPTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLSS 96 (343)
T ss_pred EEeeeEEEEc---CCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccccc
Confidence 4555555543 56799999999999999999999999999999999999998887654 5789999999999996
Q ss_pred ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 047171 405 TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATS 482 (1224)
Q Consensus 405 ~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts 482 (1224)
.|++||+.++.. ..+.++..+ .+.+.++.+ |+.......+.+|||||||||+|||||+.+|++||||||||
T Consensus 97 ~tv~eni~~~~~~~~~~~~~~~~-----~v~e~l~~v--gL~~~~~~~~~~LSgGqkQRV~IARAL~~~P~iLLlDEPts 169 (343)
T TIGR02314 97 RTVFGNVALPLELDNTPKDEIKR-----KVTELLALV--GLGDKHDSYPSNLSGGQKQRVAIARALASNPKVLLCDEATS 169 (343)
T ss_pred CcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHHhCCCEEEEeCCcc
Confidence 699999998642 122222221 122344444 55555677888999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 483 ALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 483 ~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+||+.+...+.+.|+++.+ |.|+|+|||+++.+.. ||+|++|++|++++.|++++++..
T Consensus 170 ~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~~v~~~~d~v~vl~~G~iv~~g~~~~v~~~ 231 (343)
T TIGR02314 170 ALDPATTQSILELLKEINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQGTVSEIFSH 231 (343)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcC
Confidence 9999999999999988753 8999999999999976 999999999999999999999864
No 318
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-40 Score=341.32 Aligned_cols=190 Identities=34% Similarity=0.503 Sum_probs=155.9
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC-CHHHHhcccEEecCCCC--CCc-ccHHHHHhcCCC-
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL-QLKWLRSQMGLVNQEPI--LFS-TSIKENILIGKP- 416 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~-~~~~~r~~i~~v~Q~~~--lf~-~ti~~ni~~g~~- 416 (1224)
+|+++||||+||||||||+++|+|+.+|++|+|.++|.++... .....++.|-+|+|||. |-+ .||++-|.=+..
T Consensus 32 ~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~~tv~~~l~Epl~~ 111 (252)
T COG1124 32 RGETLGIVGESGSGKSTLARLLAGLEKPSSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPRRTVGRILSEPLRP 111 (252)
T ss_pred CCCEEEEEcCCCCCHHHHHHHHhcccCCCCceEEECCcccCccccchhhccceeEEecCCccccCcchhHHHHHhhhhcc
Confidence 5779999999999999999999999999999999999877554 34467889999999995 322 277766642211
Q ss_pred ---CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHH
Q 047171 417 ---GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQ 493 (1224)
Q Consensus 417 ---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~ 493 (1224)
+...+++.++++..++. ......++.+|||||||||||||||..+|++||||||||+||+..+..|.
T Consensus 112 ~~~~~~~~~i~~~L~~VgL~----------~~~l~R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~Il 181 (252)
T COG1124 112 HGLSKSQQRIAELLDQVGLP----------PSFLDRRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQIL 181 (252)
T ss_pred CCccHHHHHHHHHHHHcCCC----------HHHHhcCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHH
Confidence 11223344444444332 13456778899999999999999999999999999999999999999999
Q ss_pred HHHHHHcCC--CeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 494 EALDQASQG--RTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 494 ~~l~~~~~~--~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+.+.++++. -|.|+|||+++.+.+ ||||+||++|+++|.++.+++...
T Consensus 182 nlL~~l~~~~~lt~l~IsHdl~~v~~~cdRi~Vm~~G~ivE~~~~~~l~~~ 232 (252)
T COG1124 182 NLLLELKKERGLTYLFISHDLALVEHMCDRIAVMDNGQIVEIGPTEELLSH 232 (252)
T ss_pred HHHHHHHHhcCceEEEEeCcHHHHHHHhhheeeeeCCeEEEeechhhhhcC
Confidence 999887754 599999999999988 999999999999999999998865
No 319
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-40 Score=331.15 Aligned_cols=217 Identities=28% Similarity=0.472 Sum_probs=182.0
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
+++++++.+|++ ...+++||||+++.||.+||.|+|||||||+++.|..++.|++|+|+|||.|+.+ ++...|++||
T Consensus 2 l~v~~l~K~y~~--~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~-~p~~vrr~IG 78 (245)
T COG4555 2 LEVTDLTKSYGS--KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVR-DPSFVRRKIG 78 (245)
T ss_pred eeeeehhhhccC--HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeeccccc-ChHHHhhhcc
Confidence 678999999974 3448999999999999999999999999999999999999999999999999977 6788999999
Q ss_pred EEecCCCCCc-ccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
+++-+.-|+. .|.||||.|+.. +-++.++. ++.+.+.+-.. |.+-+|..+| +||-|+|||++|||||+++
T Consensus 79 Vl~~e~glY~RlT~rEnl~~Fa~L~~l~~~~~k--ari~~l~k~l~-l~~~~~rRv~----~~S~G~kqkV~iARAlvh~ 151 (245)
T COG4555 79 VLFGERGLYARLTARENLKYFARLNGLSRKEIK--ARIAELSKRLQ-LLEYLDRRVG----EFSTGMKQKVAIARALVHD 151 (245)
T ss_pred eecCCcChhhhhhHHHHHHHHHHHhhhhhhHHH--HHHHHHHHHhC-hHHHHHHHHh----hhchhhHHHHHHHHHHhcC
Confidence 9997776774 799999998642 22233322 12222222211 1122344454 5999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMMV-GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|+|++||||||+||..+.+.+++-+.+... |++||+-||.++.++. ||+|+++++|+++..|+++++.++
T Consensus 152 P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 152 PSILVLDEPTSGLDIRTRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred CCeEEEcCCCCCccHHHHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 999999999999999999999999998774 9999999999999985 999999999999999999999764
No 320
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=2.7e-40 Score=326.12 Aligned_cols=196 Identities=31% Similarity=0.546 Sum_probs=164.9
Q ss_pred EEEEeEEEECCCC-----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCC---HHHHhccc
Q 047171 328 IEFKDVDFSYPTR-----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQ---LKWLRSQM 393 (1224)
Q Consensus 328 i~~~~v~f~y~~~-----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~~i 393 (1224)
|+|+||++.|++. ++++++-|+||||||||||+|+|.+...|+.|+|.++|+|+..+. ...+|++|
T Consensus 2 I~f~~V~k~Y~~g~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt~G~i~~~~~dl~~l~~~~iP~LRR~I 81 (223)
T COG2884 2 IRFENVSKAYPGGREALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPTRGKILVNGHDLSRLKGREIPFLRRQI 81 (223)
T ss_pred eeehhhhhhcCCCchhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCCCceEEECCeecccccccccchhhhee
Confidence 6777777777643 356799999999999999999999999999999999999998775 45689999
Q ss_pred EEecCCCCCCcc-cHHHHHhcCCC--CCC----HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHH
Q 047171 394 GLVNQEPILFST-SIKENILIGKP--GAS----METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIAR 466 (1224)
Q Consensus 394 ~~v~Q~~~lf~~-ti~~ni~~g~~--~~~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiAR 466 (1224)
|+|+||.-|... ||.||++|... ... .+++.++++.+++.+- ...-+.+||||||||+||||
T Consensus 82 GvVFQD~rLL~~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k-----------~~~lP~~LSGGEQQRvaIAR 150 (223)
T COG2884 82 GVVFQDFRLLPDRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHK-----------ARALPSQLSGGEQQRVAIAR 150 (223)
T ss_pred eeEeeeccccccchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchh-----------hhcCccccCchHHHHHHHHH
Confidence 999999987755 99999998643 122 2345555555554444 44445789999999999999
Q ss_pred HhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHH-cCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecC
Q 047171 467 ALIRDPKILLLDEATSALDAESERIVQEALDQA-SQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGS 534 (1224)
Q Consensus 467 al~~~~~ililDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~ 534 (1224)
|++.+|++||-||||.+|||++...|++.++++ +.|.||+|.||+.+.+.. --|++.+++|+++....
T Consensus 151 AiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr~GtTVl~ATHd~~lv~~~~~rvl~l~~Grl~~d~~ 220 (223)
T COG2884 151 AIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINRLGTTVLMATHDLELVNRMRHRVLALEDGRLVRDES 220 (223)
T ss_pred HHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhhcCcEEEEEeccHHHHHhccCcEEEEeCCEEEeccc
Confidence 999999999999999999999999999999886 469999999999999987 66899999999987543
No 321
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=7.9e-40 Score=354.74 Aligned_cols=202 Identities=34% Similarity=0.514 Sum_probs=173.2
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
++++||+++|+. .++|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+ .+|+.++
T Consensus 1 ~~~~~l~~~~~~-----~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~--~~~~~i~ 73 (213)
T TIGR01277 1 LALDKVRYEYEH-----LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPASGSIKVNDQSHTGLA--PYQRPVS 73 (213)
T ss_pred CeEEeeeEEeCC-----cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEEcccCC--hhccceE
Confidence 368999999952 468999999999999999999999999999999999999999999999987643 4678899
Q ss_pred EEecCCCCCc-ccHHHHHccCC-CC-----CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGK-EV-----ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~-~~-----~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
||||+|.+|. .|++||+.++. +. .+++++.++++..++.+...+ ...+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~t~~en~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~-----------~~~~LS~G~~qrl~lara 142 (213)
T TIGR01277 74 MLFQENNLFAHLTVRQNIGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDR-----------LPEQLSGGQRQRVALARC 142 (213)
T ss_pred EEeccCccCCCCcHHHHHHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhC-----------CcccCCHHHHHHHHHHHH
Confidence 9999999987 59999997642 11 123455566666666554433 334799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt 1197 (1224)
++++|++|||||||++||+++.+.+.+.|++..+ ++|+|+|||+++.+.. ||++++|++|++++.|.
T Consensus 143 l~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~~~~~~~~d~v~~l~~g~i~~~~~ 212 (213)
T TIGR01277 143 LVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHLSDARAIASQIAVVSQGKIKVVSD 212 (213)
T ss_pred HhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhcCeEEEEECCeEEEecC
Confidence 9999999999999999999999999999998753 7899999999999865 99999999999999874
No 322
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=9.6e-40 Score=365.86 Aligned_cols=230 Identities=30% Similarity=0.467 Sum_probs=189.0
Q ss_pred cEEEEEEEEECCCC------CCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH-
Q 047171 977 FIELKNVFFSYPSR------PDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL- 1049 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~------~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~- 1049 (1224)
.|+++||+++|+.. .+.++|+|+||+|++||+++|+||||||||||+++|.|+++|++|+|.+||.++..++.
T Consensus 3 ~l~~~nl~~~~~~~~~~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~sG~i~~~g~~~~~~~~~ 82 (268)
T PRK10419 3 LLNVSGLSHHYAHGGLSGKHQHQTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPSQGNVSWRGEPLAKLNRA 82 (268)
T ss_pred eEEEeceEEEecCCccccccCceeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccChh
Confidence 38999999999631 13569999999999999999999999999999999999999999999999999987765
Q ss_pred --HHHhcceEEEecCCC--CC-cccHHHHHccCCC---CCCHHHHHHHHHHHhHHHHHHhccccccc-ccCCCCCCCChH
Q 047171 1050 --RKLRSCIALVSQEPT--LF-AGTIRQNIVYGKE---VATEAEIRKAAVLANAHEFISSTEDGYDT-YCGERGVQLSGG 1120 (1224)
Q Consensus 1050 --~~lR~~i~~V~Qdp~--LF-~gTIreNl~~~~~---~~~deei~~al~~a~l~~~I~~lp~gldt-~vge~G~~LSGG 1120 (1224)
..+|+.++|+||++. ++ ..|+++|+.+... ..+.+ .....+.+.+..+ |+++ .....+..||||
T Consensus 83 ~~~~~~~~i~~v~q~~~~~~~~~~t~~~~l~~~~~~~~~~~~~-----~~~~~~~~~l~~~--gl~~~~~~~~~~~LS~G 155 (268)
T PRK10419 83 QRKAFRRDIQMVFQDSISAVNPRKTVREIIREPLRHLLSLDKA-----ERLARASEMLRAV--DLDDSVLDKRPPQLSGG 155 (268)
T ss_pred HHHHHHhcEEEEEcChhhccCCCCCHHHHHHHHHHhhccCCHH-----HHHHHHHHHHHHc--CCChhHhhCCCccCChH
Confidence 347889999999983 43 4799999864311 11111 1122334455443 5653 456677899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt 1197 (1224)
||||++|||||+.+|+||||||||++||+++...+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|+
T Consensus 156 e~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~ 235 (268)
T PRK10419 156 QLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLRLVERFCQRVMVMDNGQIVETQP 235 (268)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHHHHHHhCCEEEEEECCEEeeeCC
Confidence 99999999999999999999999999999999999999998753 7899999999999975 99999999999999999
Q ss_pred hhHHhhcCCCchhHHHHH
Q 047171 1198 QSSLLSMGNGGAYYSLIK 1215 (1224)
Q Consensus 1198 ~~eLl~~~~~g~y~~l~~ 1215 (1224)
++++... ++.|..-+.
T Consensus 236 ~~~~~~~--~~~~~~~~~ 251 (268)
T PRK10419 236 VGDKLTF--SSPAGRVLQ 251 (268)
T ss_pred hhhccCC--CCHHHHHHH
Confidence 9999864 555554443
No 323
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=5.7e-40 Score=364.07 Aligned_cols=216 Identities=23% Similarity=0.370 Sum_probs=175.0
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcc--cCCCCceEEECCccCCCCCHHHH-hc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERF--YDPQSGSVMVDERNIKSYNLRKL-RS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl--~~p~~G~I~idG~di~~~~~~~l-R~ 1054 (1224)
|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+ ++|++|+|.+||.++...+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 77 (243)
T TIGR01978 1 LKIKDLHVSVED---KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARA 77 (243)
T ss_pred CeEeeEEEEECC---EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhcc
Confidence 578999999963 4699999999999999999999999999999999999 47999999999999988877665 45
Q ss_pred ceEEEecCCCCCcc-cHHHHHccCCCC---------CCHHHHHHHHHHHhHHHHHHhcccccccc-cCCCCC-CCChHHH
Q 047171 1055 CIALVSQEPTLFAG-TIRQNIVYGKEV---------ATEAEIRKAAVLANAHEFISSTEDGYDTY-CGERGV-QLSGGQK 1122 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~g-TIreNl~~~~~~---------~~deei~~al~~a~l~~~I~~lp~gldt~-vge~G~-~LSGGQr 1122 (1224)
.++|+||+|.+|.+ |++||+.+.... .+.++..+ .+.+.+..+ |++.. ...... .||||||
T Consensus 78 ~i~~v~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~LS~G~~ 150 (243)
T TIGR01978 78 GLFLAFQYPEEIPGVSNLEFLRSALNARRSARGEEPLDLLDFLK-----LLKAKLALL--GMDEEFLNRSVNEGFSGGEK 150 (243)
T ss_pred ceEeeeccccccCCcCHHHHHHHHHHHhhcccccccccHHHHHH-----HHHHHHHHc--CCchhhcccccccCcCHHHH
Confidence 69999999998875 899999753210 11111111 112222222 23211 222333 5999999
Q ss_pred HHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh--cCEEEEEeCCEEEEecChh
Q 047171 1123 QRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK--ADNIVVIKNGKVVEQGTQS 1199 (1224)
Q Consensus 1123 QRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~--aD~I~vl~~G~Ive~Gt~~ 1199 (1224)
||++|||||+++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 151 qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~~~~~~~~d~i~~l~~G~i~~~g~~~ 230 (243)
T TIGR01978 151 KRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQRLLNYIKPDYVHVLLDGRIVKSGDVE 230 (243)
T ss_pred HHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHHHHHhhcCCeEEEEeCCEEEEecCHH
Confidence 99999999999999999999999999999999999999875 47899999999999976 7999999999999999998
Q ss_pred HHhh
Q 047171 1200 SLLS 1203 (1224)
Q Consensus 1200 eLl~ 1203 (1224)
++-.
T Consensus 231 ~~~~ 234 (243)
T TIGR01978 231 LAKE 234 (243)
T ss_pred Hhcc
Confidence 6543
No 324
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=4.1e-40 Score=375.15 Aligned_cols=200 Identities=24% Similarity=0.409 Sum_probs=171.3
Q ss_pred ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcc-cHH
Q 047171 993 QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAG-TIR 1071 (1224)
Q Consensus 993 ~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~g-TIr 1071 (1224)
.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+||++.+|.. |++
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv~ 84 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLTGR 84 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCcHH
Confidence 469999999999999999999999999999999999999999999999999876 446678999999999999875 999
Q ss_pred HHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCC
Q 047171 1072 QNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATS 1145 (1224)
Q Consensus 1072 eNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTS 1145 (1224)
||+.+... ..+. +++.++++..++ +........+||||||||++|||||+++|++|||||||+
T Consensus 85 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l-----------~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~ 153 (302)
T TIGR01188 85 ENLEMMGRLYGLPKDEAEERAEELLELFEL-----------GEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTT 153 (302)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCC-----------hhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 99986421 1122 223334444333 222334456799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1146 ALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1146 aLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
+||+.+.+.+++.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 154 gLD~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 154 GLDPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 999999999999999875 47899999999999976 999999999999999999999764
No 325
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=1.7e-39 Score=354.40 Aligned_cols=192 Identities=43% Similarity=0.698 Sum_probs=176.5
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHH
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASME 421 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~ 421 (1224)
++++++|+||||||||||+++|+|+++|++|+|.++|.++...+....++.++|++|++.+|+.|+.||+.++.+....+
T Consensus 29 ~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~tv~e~l~~~~~~~~~~ 108 (220)
T cd03245 29 AGEKVAIIGRVGSGKSTLLKLLAGLYKPTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFYGTLRDNITLGAPLADDE 108 (220)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCcCCCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCccccchHHHHhhcCCCCCCHH
Confidence 56799999999999999999999999999999999999998777777788999999999999889999999875544556
Q ss_pred HHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC
Q 047171 422 TVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQ 501 (1224)
Q Consensus 422 ~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~ 501 (1224)
++.+.++..++.+.+.+.|.|++|.+.+...+||||||||++||||++.+|++|||||||++||+.+...+.+.|+++.+
T Consensus 109 ~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~ 188 (220)
T cd03245 109 RILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAMDMNSEERLKERLRQLLG 188 (220)
T ss_pred HHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhcC
Confidence 77778888888899999999999999999999999999999999999999999999999999999999999999998766
Q ss_pred CCeEEEEeCCcchhhccCEEEEEeCceEEeec
Q 047171 502 GRTMIIIAHRLSTIRKADLIGVLQSGRVIESG 533 (1224)
Q Consensus 502 ~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g 533 (1224)
++|+|++||+++.++.||+|++|++|++++.|
T Consensus 189 ~~tii~~sH~~~~~~~~d~v~~l~~g~i~~~~ 220 (220)
T cd03245 189 DKTLIIITHRPSLLDLVDRIIVMDSGRIVADG 220 (220)
T ss_pred CCEEEEEeCCHHHHHhCCEEEEEeCCeEeecC
Confidence 68999999999988779999999999998754
No 326
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-39 Score=335.40 Aligned_cols=220 Identities=29% Similarity=0.467 Sum_probs=189.7
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH-Hhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK-LRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~ 1055 (1224)
-++++|++..|.. ..+|++|||++++||+++++||||+||||++++|+|+.+|.+|+|.++|.|++..+++. .|..
T Consensus 3 mL~v~~l~~~YG~---~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~G 79 (237)
T COG0410 3 MLEVENLSAGYGK---IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLG 79 (237)
T ss_pred ceeEEeEeecccc---eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCC
Confidence 3789999999963 46999999999999999999999999999999999999999999999999999999888 5889
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
|+||||...+|. .||.|||.+|.....+++-++ ...++..+-+| -+.......+.+|||||+|-+||||||+.+
T Consensus 80 i~~VPegR~iF~~LTVeENL~~g~~~~~~~~~~~----~~~e~v~~lFP-~Lker~~~~aG~LSGGEQQMLAiaRALm~~ 154 (237)
T COG0410 80 IAYVPEGRRIFPRLTVEENLLLGAYARRDKEAQE----RDLEEVYELFP-RLKERRNQRAGTLSGGEQQMLAIARALMSR 154 (237)
T ss_pred eEeCcccccchhhCcHHHHHhhhhhccccccccc----ccHHHHHHHCh-hHHHHhcCcccCCChHHHHHHHHHHHHhcC
Confidence 999999999996 699999998732212111111 11223333455 366667788899999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|++|+|||||.+|-|.--+.|.++|+++.+ +.||++|-++...... +||.+||++|+|+..|+.+||.++
T Consensus 155 PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 155 PKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred CCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 999999999999999999999999999874 5599999999998755 999999999999999999999875
No 327
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=8.2e-40 Score=375.97 Aligned_cols=205 Identities=31% Similarity=0.500 Sum_probs=176.8
Q ss_pred cEEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHH----hcccEEecCCCCC
Q 047171 327 EIEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWL----RSQMGLVNQEPIL 402 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l 402 (1224)
...++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|+++|+++...+...+ |++|+||+|++++
T Consensus 6 ~~~l~~vs~~i~---~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~l 82 (363)
T TIGR01186 6 KKGVNDADLAIA---KGEIFVIMGLSGSGKSTTVRMLNRLIEPTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFAL 82 (363)
T ss_pred ceeEEeeEEEEc---CCCEEEEECCCCChHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCcC
Confidence 356899999975 578999999999999999999999999999999999999999988877 7899999999999
Q ss_pred Ccc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 047171 403 FST-SIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDE 479 (1224)
Q Consensus 403 f~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE 479 (1224)
|+. ||+|||.|+.+. .+.++..+ .+.+.++.+ |++...++.+.+|||||||||+|||||+.+|+||||||
T Consensus 83 ~~~~TV~eNi~~~~~~~~~~~~~~~~-----~~~~~l~~v--gL~~~~~~~p~~LSGGq~QRV~lARAL~~~p~iLLlDE 155 (363)
T TIGR01186 83 FPHMTILQNTSLGPELLGWPEQERKE-----KALELLKLV--GLEEYEHRYPDELSGGMQQRVGLARALAAEPDILLMDE 155 (363)
T ss_pred CCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 975 999999987431 12222211 223344444 56666788889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 480 ATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 480 ~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||+||+.+.+.+++.+.++. .++|+|+|||+++++.. ||+|++|++|++++.|+++++++.
T Consensus 156 P~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~ea~~~~drI~vl~~G~iv~~g~~~ei~~~ 220 (363)
T TIGR01186 156 AFSALDPLIRDSMQDELKKLQATLQKTIVFITHDLDEAIRIGDRIVIMKAGEIVQVGTPDEILRN 220 (363)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEeeCCHHHHHhC
Confidence 999999999999999998764 38999999999998755 999999999999999999999875
No 328
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=1.2e-39 Score=364.89 Aligned_cols=222 Identities=25% Similarity=0.416 Sum_probs=183.3
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC---CceEEECCccCCCC-----C
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ---SGSVMVDERNIKSY-----N 1048 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~---~G~I~idG~di~~~-----~ 1048 (1224)
.|+++||+++|++ .++|+|+||+|++||+++|+||||||||||+++|.|+++|+ +|+|.+||.++... +
T Consensus 4 ~l~~~nl~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~ 80 (262)
T PRK09984 4 IIRVEKLAKTFNQ---HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARD 80 (262)
T ss_pred EEEEeeEEEEeCC---eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchh
Confidence 4899999999963 46999999999999999999999999999999999999986 49999999988653 3
Q ss_pred HHHHhcceEEEecCCCCCc-ccHHHHHccCCCCC--------------CHHHHHHHHHHHhHHHHHHhcccccccccCCC
Q 047171 1049 LRKLRSCIALVSQEPTLFA-GTIRQNIVYGKEVA--------------TEAEIRKAAVLANAHEFISSTEDGYDTYCGER 1113 (1224)
Q Consensus 1049 ~~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~~~~--------------~deei~~al~~a~l~~~I~~lp~gldt~vge~ 1113 (1224)
...+|++++|+||++.+|. .|++||+.++.... .++++.++++..++. ......
T Consensus 81 ~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-----------~~~~~~ 149 (262)
T PRK09984 81 IRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMV-----------HFAHQR 149 (262)
T ss_pred HHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCH-----------HHHhCC
Confidence 4567889999999999887 59999998653110 112233344443333 233445
Q ss_pred CCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCC
Q 047171 1114 GVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNG 1190 (1224)
Q Consensus 1114 G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G 1190 (1224)
..+||||||||++||||++.+|++|||||||++||.++.+.+.+.|+++. .++|+|++||+++.+.. ||+|++|++|
T Consensus 150 ~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~~~~~~~d~i~~l~~g 229 (262)
T PRK09984 150 VSTLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVDYALRYCERIVALRQG 229 (262)
T ss_pred ccccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECC
Confidence 66899999999999999999999999999999999999999999999876 37899999999998755 9999999999
Q ss_pred EEEEecChhHHhhcCCCchhHHHHHH
Q 047171 1191 KVVEQGTQSSLLSMGNGGAYYSLIKM 1216 (1224)
Q Consensus 1191 ~Ive~Gt~~eLl~~~~~g~y~~l~~~ 1216 (1224)
++++.|+++++ . .....+++..
T Consensus 230 ~i~~~g~~~~~-~---~~~~~~~~~~ 251 (262)
T PRK09984 230 HVFYDGSSQQF-D---NERFDHLYRS 251 (262)
T ss_pred EEEEeCCHHHh-c---cHHHHHHHhh
Confidence 99999999997 3 2345555543
No 329
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-39 Score=370.52 Aligned_cols=208 Identities=27% Similarity=0.447 Sum_probs=177.1
Q ss_pred cEEEEeEEEECCCC---------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC-------
Q 047171 327 EIEFKDVDFSYPTR---------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL------- 384 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~---------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~------- 384 (1224)
-|+++||+|+|++. ++++++||+|+||||||||+++|+|+++|++|+|.++|+++.+.
T Consensus 21 ~l~~~nl~~~y~~~~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~~G~I~i~g~~~~~~~~~~~~~ 100 (320)
T PRK13631 21 ILRVKNLYCVFDEKQENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSKYGTIQVGDIYIGDKKNNHELI 100 (320)
T ss_pred eEEEEeEEEEeCCCCcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCEEccccccccccc
Confidence 48999999999631 24569999999999999999999999999999999999998653
Q ss_pred ---------CHHHHhcccEEecCCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCC
Q 047171 385 ---------QLKWLRSQMGLVNQEP--ILFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQF 450 (1224)
Q Consensus 385 ---------~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~ 450 (1224)
+...+|++||||+|+| .+|+.||+|||.++.. ..+.++..+ .+.++++.+ |++ ...++.
T Consensus 101 ~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~ 173 (320)
T PRK13631 101 TNPYSKKIKNFKELRRRVSMVFQFPEYQLFKDTIEKDIMFGPVALGVKKSEAKK-----LAKFYLNKM--GLDDSYLERS 173 (320)
T ss_pred ccccccccchHHHHHhcEEEEEECchhccccchHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCChhHhcCC
Confidence 3456889999999998 6899999999998742 223333221 234566666 664 467888
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHH-cCCCeEEEEeCCcchhh-ccCEEEEEeCce
Q 047171 451 GVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQA-SQGRTMIIIAHRLSTIR-KADLIGVLQSGR 528 (1224)
Q Consensus 451 g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~-~~~~t~i~i~H~l~~~~-~ad~i~vl~~G~ 528 (1224)
+.+||||||||++|||||+.+|+|||||||||+||+.+++.+.+.|.++ .+|+|+|+|||+++.+. .||+|++|++|+
T Consensus 174 ~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~~~~~~adri~vl~~G~ 253 (320)
T PRK13631 174 PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTMEHVLEVADEVIVMDKGK 253 (320)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCE
Confidence 9999999999999999999999999999999999999999999999876 35899999999999885 599999999999
Q ss_pred EEeecChHHHHhh
Q 047171 529 VIESGSHDVLMQM 541 (1224)
Q Consensus 529 i~~~g~~~~l~~~ 541 (1224)
+++.|+++++...
T Consensus 254 i~~~g~~~~~~~~ 266 (320)
T PRK13631 254 ILKTGTPYEIFTD 266 (320)
T ss_pred EEEeCCHHHHhcC
Confidence 9999999998754
No 330
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-40 Score=350.52 Aligned_cols=206 Identities=31% Similarity=0.462 Sum_probs=162.3
Q ss_pred EeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCH-HHHhcccEEecCCCCCCc-ccHH
Q 047171 331 KDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQL-KWLRSQMGLVNQEPILFS-TSIK 408 (1224)
Q Consensus 331 ~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~-~~~r~~i~~v~Q~~~lf~-~ti~ 408 (1224)
+|+++..+ .++.+|+.||||||||||+++|+|+..|++|.|.+||..+.+.+. ..-.++||+|+|+..||. .||+
T Consensus 19 ~di~l~i~---~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~HmtVa 95 (345)
T COG1118 19 DDISLDIK---SGELVALLGPSGAGKSTLLRIIAGLETPDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFPHMTVA 95 (345)
T ss_pred ccceeeec---CCcEEEEECCCCCcHHHHHHHHhCcCCCCCceEEECCEeccchhccchhhcceeEEEechhhcccchHH
Confidence 35665543 577999999999999999999999999999999999994433332 333468999999999985 5999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHH
Q 047171 409 ENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAES 488 (1224)
Q Consensus 409 ~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~ 488 (1224)
+||+||.+-. ...-.++.....+++.+..+ .++-.-...+.+|||||||||||||||..+|++|+||||+++||++.
T Consensus 96 ~NIAFGl~~~-~~~p~~~~~r~rv~elL~lv--qL~~la~ryP~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~v 172 (345)
T COG1118 96 DNIAFGLKVR-KERPSEAEIRARVEELLRLV--QLEGLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKV 172 (345)
T ss_pred hhhhhccccc-ccCCChhhHHHHHHHHHHHh--cccchhhcCchhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHH
Confidence 9999997311 00000111122222333322 23334456788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhc
Q 047171 489 ERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMN 542 (1224)
Q Consensus 489 ~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~ 542 (1224)
.+.+++.|++.. -|.|+++|||+.+++.. ||||+||++|+|...|+++|....+
T Consensus 173 r~~lr~wLr~~~~~~~~ttvfVTHD~eea~~ladrvvvl~~G~Ieqvg~p~ev~~~P 229 (345)
T COG1118 173 RKELRRWLRKLHDRLGVTTVFVTHDQEEALELADRVVVLNQGRIEQVGPPDEVYDHP 229 (345)
T ss_pred HHHHHHHHHHHHHhhCceEEEEeCCHHHHHhhcceEEEecCCeeeeeCCHHHHhcCC
Confidence 999999888754 38899999999999865 9999999999999999999998764
No 331
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=9.1e-40 Score=367.58 Aligned_cols=214 Identities=30% Similarity=0.536 Sum_probs=186.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.++++||+.+|.. +..+|+||||+|++||.+|++||||||||||+++|+|+..|++|+|.++|.|...- ...+|+++
T Consensus 4 ~i~~~~l~k~~~~--~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~~G~i~i~G~~~~~~-~~~~~~~i 80 (293)
T COG1131 4 VIEVRNLTKKYGG--DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPTSGEILVLGYDVVKE-PAKVRRRI 80 (293)
T ss_pred eeeecceEEEeCC--CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCceEEEEcCEeCccC-HHHHHhhe
Confidence 4789999999962 34699999999999999999999999999999999999999999999999988764 77899999
Q ss_pred EEEecCCCCCc-ccHHHHHccCCC---C---CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1057 ALVSQEPTLFA-GTIRQNIVYGKE---V---ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1057 ~~V~Qdp~LF~-gTIreNl~~~~~---~---~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
|||||+|.++. -|++|||.+... . ..++.+.+.++..++.+. -......||+|||||++||+
T Consensus 81 gy~~~~~~~~~~lT~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~-----------~~~~~~~lS~G~kqrl~ia~ 149 (293)
T COG1131 81 GYVPQEPSLYPELTVRENLEFFARLYGLSKEEAEERIEELLELFGLEDK-----------ANKKVRTLSGGMKQRLSIAL 149 (293)
T ss_pred EEEccCCCCCccccHHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchh-----------hCcchhhcCHHHHHHHHHHH
Confidence 99999999776 599999987532 1 124566777776665441 12334579999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-C-CeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMV-G-RTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~-~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
||+.+|++|||||||++||+.+...+++.|+++.+ + +||++.||.++.+.. ||+|++|++|+++..|+++++...
T Consensus 150 aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l~e~~~~~d~v~il~~G~~~~~g~~~~l~~~ 227 (293)
T COG1131 150 ALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHILEEAEELCDRVIILNDGKIIAEGTPEELKEK 227 (293)
T ss_pred HHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcHHHHHHhCCEEEEEeCCEEEEeCCHHHHHHh
Confidence 99999999999999999999999999999999875 4 699999999999988 999999999999999999998654
No 332
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-39 Score=345.83 Aligned_cols=200 Identities=30% Similarity=0.513 Sum_probs=169.9
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
.|+++|++|+|.++ +++++++|+||||||||||+|+|+|+.+|.+|+|.+.|.+++.... +..||||
T Consensus 4 ~i~v~nl~v~y~~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~~G~i~~~g~~~~~~~~---~~~IgYV 80 (254)
T COG1121 4 MIEVENLTVSYGNRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPSSGEIKIFGKPVRKRRK---RLRIGYV 80 (254)
T ss_pred EEEEeeeEEEECCEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCCcceEEEcccccccccc---CCeEEEc
Confidence 47888888888743 3566999999999999999999999999999999999988765432 4579999
Q ss_pred cCCC---CCCcccHHHHHhcCCCCC----------CHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHH
Q 047171 397 NQEP---ILFSTSIKENILIGKPGA----------SMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIA 463 (1224)
Q Consensus 397 ~Q~~---~lf~~ti~~ni~~g~~~~----------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qria 463 (1224)
||.. |-|+-||+|=+.+|+... +.+++.++++.+++.++ ......+|||||+||+.
T Consensus 81 PQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~-----------~~r~i~~LSGGQ~QRV~ 149 (254)
T COG1121 81 PQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDL-----------RDRQIGELSGGQKQRVL 149 (254)
T ss_pred CcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhh-----------hCCcccccCcHHHHHHH
Confidence 9965 668999999999985321 23667777777776655 34556789999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 464 IARALIRDPKILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 464 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||||+++|++|+|||||+++|+.++..+.+.|++++ +|+|+++|||+++.+.. +|+|+.| |++++..|+.++....
T Consensus 150 lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~~v~~~~D~vi~L-n~~~~~~G~~~~~~~~ 228 (254)
T COG1121 150 LARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLGLVMAYFDRVICL-NRHLIASGPPEEVLTE 228 (254)
T ss_pred HHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcHHhHhhCCEEEEE-cCeeEeccChhhccCH
Confidence 9999999999999999999999999999999999876 49999999999999976 9999888 5578899999998763
No 333
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-39 Score=361.62 Aligned_cols=202 Identities=27% Similarity=0.454 Sum_probs=170.6
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++... +..++
T Consensus 2 l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-----~~~~~ 73 (255)
T PRK11248 2 LQISHLYADYGG---KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQHGSITLDGKPVEGP-----GAERG 73 (255)
T ss_pred EEEEEEEEEeCC---eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCC-----CCcEE
Confidence 789999999963 4699999999999999999999999999999999999999999999999988642 34699
Q ss_pred EEecCCCCCc-ccHHHHHccCCC--CCCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKE--VATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~--~~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
|+||++.+|. .|++||+.++.. ..+. +++.++++..+ ++........+||||||||++||||
T Consensus 74 ~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~g-----------l~~~~~~~~~~LSgGq~qrl~lara 142 (255)
T PRK11248 74 VVFQNEGLLPWRNVQDNVAFGLQLAGVEKMQRLEIAHQMLKKVG-----------LEGAEKRYIWQLSGGQRQRVGIARA 142 (255)
T ss_pred EEeCCCccCCCCcHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcC-----------ChhHhhCChhhCCHHHHHHHHHHHH
Confidence 9999999887 699999986521 1122 22333333333 3333345567899999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEe--CCEEEEecCh
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIK--NGKVVEQGTQ 1198 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~--~G~Ive~Gt~ 1198 (1224)
|+++|++|||||||++||+.+...+.+.|+++. .++|+|+|||+++.+.. ||+|++|+ +|++++.++.
T Consensus 143 l~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 143 LAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDIEEAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999999999999999999999999863 38999999999999866 99999998 5999998764
No 334
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-39 Score=348.58 Aligned_cols=191 Identities=23% Similarity=0.352 Sum_probs=164.2
Q ss_pred cEEEEEEEEECCCC-CCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC---CCCceEEECCccCCCCCHHHH
Q 047171 977 FIELKNVFFSYPSR-PDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD---PQSGSVMVDERNIKSYNLRKL 1052 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~-~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~---p~~G~I~idG~di~~~~~~~l 1052 (1224)
.+.++||+|.|+.. .+.++|+|+||+|++||++||+|+||||||||+++|.|+++ |++|+|.+||.++...+ ..+
T Consensus 3 ~~~~~~~~~~~~~~~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~~~~~~-~~~ 81 (202)
T cd03233 3 TLSWRNISFTTGKGRSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIPYKEFA-EKY 81 (202)
T ss_pred eEEEEccEEEeccCCCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEECccch-hhh
Confidence 37899999999853 35679999999999999999999999999999999999999 89999999999988764 457
Q ss_pred hcceEEEecCCCCCc-ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHH
Q 047171 1053 RSCIALVSQEPTLFA-GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAV 1131 (1224)
Q Consensus 1053 R~~i~~V~Qdp~LF~-gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAl 1131 (1224)
|++++|+||++.+|. .|++|||.++... . ..+....||||||||++||||+
T Consensus 82 ~~~i~~~~q~~~~~~~~tv~~~l~~~~~~------~----------------------~~~~~~~LS~Ge~qrl~laral 133 (202)
T cd03233 82 PGEIIYVSEEDVHFPTLTVRETLDFALRC------K----------------------GNEFVRGISGGERKRVSIAEAL 133 (202)
T ss_pred cceEEEEecccccCCCCcHHHHHhhhhhh------c----------------------cccchhhCCHHHHHHHHHHHHH
Confidence 889999999998886 5999999865210 0 1234457999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEc-cCchhhh-hcCEEEEEeCCEEEEec
Q 047171 1132 LKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVA-HRLSTIQ-KADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1132 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~Ia-Hrl~ti~-~aD~I~vl~~G~Ive~G 1196 (1224)
+++|++|||||||++||+++++.+.+.|+++.+ ++|+|+++ |+++.+. .||+|++|++|++++.|
T Consensus 134 ~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~G~i~~~g 202 (202)
T cd03233 134 VSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYEGRQIYYG 202 (202)
T ss_pred hhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEECCEEEecC
Confidence 999999999999999999999999999998754 46766665 5556664 59999999999998865
No 335
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.9e-39 Score=376.58 Aligned_cols=207 Identities=29% Similarity=0.474 Sum_probs=176.4
Q ss_pred EEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC----HHHHhcceE
Q 047171 982 NVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN----LRKLRSCIA 1057 (1224)
Q Consensus 982 ~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~----~~~lR~~i~ 1057 (1224)
|++++|++ . .+ |+||+|++||+++|+||||||||||+++|+|+++|++|+|.+||.++...+ ...+|++++
T Consensus 4 ~l~~~~~~---~-~~-~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~ 78 (354)
T TIGR02142 4 RFSKRLGD---F-SL-DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPDEGEIVLNGRTLFDSRKGIFLPPEKRRIG 78 (354)
T ss_pred EEEEEECC---E-EE-EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccCccccccchhhCCeE
Confidence 89999963 2 35 999999999999999999999999999999999999999999999986532 345788999
Q ss_pred EEecCCCCCc-ccHHHHHccCCCCCCHH----HHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKEVATEA----EIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~~~~de----ei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
||||++.+|. .|++||+.++....... .+.+.++.. |++........+||||||||++|||||+
T Consensus 79 ~v~q~~~l~~~~tv~enl~~~~~~~~~~~~~~~~~~~l~~~-----------gL~~~~~~~~~~LSgGqkqRvalAraL~ 147 (354)
T TIGR02142 79 YVFQEARLFPHLSVRGNLRYGMKRARPSERRISFERVIELL-----------GIGHLLGRLPGRLSGGEKQRVAIGRALL 147 (354)
T ss_pred EEecCCccCCCCcHHHHHHHHhhccChhHHHHHHHHHHHHc-----------CChhHhcCChhhCCHHHHHHHHHHHHHH
Confidence 9999999997 59999999864322221 233333333 4444455666789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhc
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
++|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 148 ~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (354)
T TIGR02142 148 SSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSLQEVLRLADRVVVLEDGRVAAAGPIAEVWAS 222 (354)
T ss_pred cCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEeCCEEEEECCHHHHhcC
Confidence 99999999999999999999999999998753 7899999999999866 999999999999999999999875
No 336
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.9e-39 Score=356.07 Aligned_cols=203 Identities=33% Similarity=0.515 Sum_probs=169.9
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCH---HHHhcccEEecCCCCCCcc
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQL---KWLRSQMGLVNQEPILFST 405 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~~i~~v~Q~~~lf~~ 405 (1224)
.++|+||... ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|+.|+||+|++.+|+.
T Consensus 15 ~l~~vs~~i~---~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (235)
T cd03261 15 VLKGVDLDVR---RGEILAIIGPSGSGKSTLLRLIVGLLRPDSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFDS 91 (235)
T ss_pred EEeeeEEEEc---CCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccChhhHHHHhcceEEEccCcccCCC
Confidence 4666776653 577999999999999999999999999999999999999987664 5678899999999999886
Q ss_pred -cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 047171 406 -SIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEAT 481 (1224)
Q Consensus 406 -ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~t 481 (1224)
|++||+.++.. ..+.++..+ .+.+.++.+ |+.........+||||||||++|||||+.+|++|||||||
T Consensus 92 ~tv~~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~ia~al~~~p~llllDEPt 164 (235)
T cd03261 92 LTVFENVAFPLREHTRLSEEEIRE-----IVLEKLEAV--GLRGAEDLYPAELSGGMKKRVALARALALDPELLLYDEPT 164 (235)
T ss_pred CcHHHHHHHHHhhccCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 99999988632 122222221 123344444 5555566777899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 482 SALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 482 s~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 165 ~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 227 (235)
T cd03261 165 AGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLDTAFAIADRIAVLYDGKIVAEGTPEELRAS 227 (235)
T ss_pred ccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhcCEEEEEECCeEEEecCHHHHcCC
Confidence 9999999999999998864 38999999999999876 999999999999999999988654
No 337
>COG4178 ABC-type uncharacterized transport system, permease and ATPase components [General function prediction only]
Probab=100.00 E-value=3.4e-36 Score=353.94 Aligned_cols=435 Identities=17% Similarity=0.134 Sum_probs=326.4
Q ss_pred HHHHHHHHHHHHHH----HHHHHHcCChhhhhccCCCCCHHH------HHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHH
Q 047171 70 TRTAERQASRIRME----YLKSVLRQEVGFFDNQTSSSSTFQ------VVTNITSDAHSIQDAVAEKIPNCLAHLTSFIG 139 (1224)
Q Consensus 70 ~~~~~~~~~~lR~~----~~~~l~~~~~~~f~~~~~~~~~G~------l~sr~~~D~~~i~~~~~~~~~~~~~~~~~~~~ 139 (1224)
.++.+++..+.|.- +.++-+.....|+.. ..|. .=.|+..|+..+-+...+....++.++++++.
T Consensus 107 ~~L~~~l~~~wR~wLt~~l~~~wl~~~~~y~l~-----~~~~~~~~dNpDQRi~eDi~~~t~~t~~l~~g~l~s~islis 181 (604)
T COG4178 107 TWLNQMLRLRWREWLTKDLLDRWLDPRRYYRLA-----QAGGIGLIDNPDQRIQEDIRNFTETTLDLSFGLLQSVISLIS 181 (604)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHH-----hcccccCCCChHHhHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 34455555555554 445545545333332 2222 23699999999998877777777887777766
Q ss_pred HHHHHHHHh---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHh
Q 047171 140 SILVAFLLS---------------WRLALAALPFSLLFIVPGIVFGKVLKDLGAQGKDAYEAAGGIAEQAISSIRTVYSF 204 (1224)
Q Consensus 140 ~~~~~~~~~---------------~~l~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~~vk~~ 204 (1224)
..+++..++ ..+..++++.+++.-++..+++|.+.+..-+.++..++.-..+.-.-++...|-.|
T Consensus 182 F~~iLw~lsg~~~~~~~g~~~~I~g~mv~~~i~Ya~~~s~~~~~iGr~Li~LN~~~~~~EA~fR~~Lvrv~enaE~IAly 261 (604)
T COG4178 182 FTGILWSLSGGLAFTIGGFSFGIPGYMVWAVIIYAISASLLTHLIGRPLIRLNFERQKLEADFRYSLVRVRENAEAIALY 261 (604)
T ss_pred HHHHHHHccCcceEeecccccccchHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHhhHHHHHHh
Confidence 555554222 22334445555566666678889988888888888888888888899999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHH
Q 047171 205 VGEHQTLKRFSLALRKNMELGIKQGLTKGLLLGSM-GMTYGAWAFQSWVGSVLVTERGEKGGLVFVAGICTILGGVGIMS 283 (1224)
Q Consensus 205 ~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 283 (1224)
+.|+.|.++.++......+...+.......+..+. ....++.++-+..++-....|.++.|.+......+......++.
T Consensus 262 ~GE~~Er~~l~~~f~~v~~n~~~l~~~~~~l~~~~~gy~~~s~v~P~li~ap~~f~g~i~~G~lmqa~~aF~~v~sslsw 341 (604)
T COG4178 262 RGEKVERRRLDDRFDAVLGNWRRLVRAQIRLTWFQLGYGWLSVVLPILIAAPRYFSGQITFGGLMQAVGAFGQVHSSLSW 341 (604)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhHHHHHHHHHhccHhhhcCcChHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888777776665555444433333333 33334444444555666778999999999888777777788889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccCC------CCCCCcccc-cccccccccEEEEeEEEECCCC-----------CCCCE
Q 047171 284 ALPNLSFISQATTAATRIFEMIDRVP------VINSEDEIG-KTLAYLRGEIEFKDVDFSYPTR-----------PDTPT 345 (1224)
Q Consensus 284 ~~~~~~~~~~~~~s~~ri~~~l~~~~------~~~~~~~~~-~~~~~~~~~i~~~~v~f~y~~~-----------~~~~~ 345 (1224)
+...+..+..-++...|+.++-+.-. +........ ......+..|+++|++..-|+. ++|+.
T Consensus 342 fi~~~~~ia~~rA~~~Rl~~f~~ai~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~nl~l~~p~~~~ll~~l~~~v~~G~~ 421 (604)
T COG4178 342 FIDNYDAIADWRATLLRLAEFRQALEAAQMDTEKPARTGRRIDFDDNADHGITLENLSLRTPDGQTLLSELNFEVRPGER 421 (604)
T ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHhccCcccccCcccccccccccccceeEEeeeeEECCCCCeeeccceeeeCCCCE
Confidence 99999999999999999999864221 111110000 0001114679999999988753 35779
Q ss_pred EEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCC--CCHHHH
Q 047171 346 IGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPG--ASMETV 423 (1224)
Q Consensus 346 ~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~~~~~~ 423 (1224)
+.|.||||||||||++.|+|++|--+|+|.+-.. ..+-|+||.|++-.||+||-|+|.+.. .+++++
T Consensus 422 llI~G~SG~GKTsLlRaiaGLWP~g~G~I~~P~~-----------~~~lflpQ~PY~p~GtLre~l~YP~~~~~~~d~~l 490 (604)
T COG4178 422 LLITGESGAGKTSLLRALAGLWPWGSGRISMPAD-----------SALLFLPQRPYLPQGTLREALCYPNAAPDFSDAEL 490 (604)
T ss_pred EEEECCCCCCHHHHHHHHhccCccCCCceecCCC-----------CceEEecCCCCCCCccHHHHHhCCCCCCCCChHHH
Confidence 9999999999999999999999999999977521 258999999999999999999998754 789999
Q ss_pred HHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCC
Q 047171 424 VKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGR 503 (1224)
Q Consensus 424 ~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~ 503 (1224)
.+++.++++.++++++.+-. .=...||+|||||||+||.++++|++++|||+|||||+++|..+.+.+++...+.
T Consensus 491 ~~vL~~vgL~~L~~rl~~~~-----~W~~vLS~GEqQRlafARilL~kP~~v~LDEATsALDe~~e~~l~q~l~~~lp~~ 565 (604)
T COG4178 491 VAVLHKVGLGDLAERLDEED-----RWDRVLSGGEQQRLAFARLLLHKPKWVFLDEATSALDEETEDRLYQLLKEELPDA 565 (604)
T ss_pred HHHHHHcCcHHHHHHHhccC-----cHhhhcChhHHHHHHHHHHHHcCCCEEEEecchhccChHHHHHHHHHHHhhCCCC
Confidence 99999999999999985321 1235799999999999999999999999999999999999999999999988999
Q ss_pred eEEEEeCCcchhhccCEEEEEe
Q 047171 504 TMIIIAHRLSTIRKADLIGVLQ 525 (1224)
Q Consensus 504 t~i~i~H~l~~~~~ad~i~vl~ 525 (1224)
|+|-|.||.......++.+-++
T Consensus 566 tvISV~Hr~tl~~~h~~~l~l~ 587 (604)
T COG4178 566 TVISVGHRPTLWNFHSRQLELL 587 (604)
T ss_pred EEEEeccchhhHHHHhhheeec
Confidence 9999999998887766655554
No 338
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.7e-39 Score=354.08 Aligned_cols=208 Identities=34% Similarity=0.471 Sum_probs=173.1
Q ss_pred EEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHH---HHh
Q 047171 978 IELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLR---KLR 1053 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~---~lR 1053 (1224)
++++|+++.|++.. ..++|+|+||++++||++||+|+||||||||+++|.|+++|++|+|.+||.++.+.+.. ..|
T Consensus 2 l~~~~l~~~~~~~~~~~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 81 (220)
T TIGR02982 2 ISIRNLNHYYGHGSLRKQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQEGSLKVLGQELYGASEKELVQLR 81 (220)
T ss_pred EEEEEEEEEccCCCcceeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEhHhcCHhHHHHHH
Confidence 78999999996321 24699999999999999999999999999999999999999999999999999877643 468
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCC---CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKE---VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~---~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
+.++|+||+|.+|. .|+.||+.++.. ..+.++..+ .+.+.+..+ |++........+||||||||++|||
T Consensus 82 ~~i~~~~q~~~~~~~~t~~~n~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~lS~G~~qrv~lar 154 (220)
T TIGR02982 82 RNIGYIFQAHNLLGFLTARQNVQMALELQPNLSYQEARE-----RARAMLEAV--GLGDHLDYYPHNLSGGQKQRVAIAR 154 (220)
T ss_pred hheEEEcCChhhcCCCCHHHHHHHHHHhccCCCHHHHHH-----HHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHH
Confidence 89999999999987 799999987532 122222221 112233332 3444444555689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhhcCEEEEEeCCEE
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQKADNIVVIKNGKV 1192 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~aD~I~vl~~G~I 1192 (1224)
|++++|++|||||||++||+++.+.+.+.|+++.+ ++|+|+|||+++....||+|++|++|++
T Consensus 155 al~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~~~~~~d~v~~l~~g~~ 219 (220)
T TIGR02982 155 ALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNRILDVADRIVHMEDGKL 219 (220)
T ss_pred HHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHhhCCEEEEEECCEE
Confidence 99999999999999999999999999999998763 7999999999997777999999999986
No 339
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-39 Score=339.07 Aligned_cols=170 Identities=35% Similarity=0.633 Sum_probs=157.7
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
++++|++++|++ .++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+ ..+|++++
T Consensus 1 l~~~~l~~~~~~---~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 76 (173)
T cd03230 1 IEVRNLSKRYGK---KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLKPDSGEIKVLGKDIKKEP-EEVKRRIG 76 (173)
T ss_pred CEEEEEEEEECC---eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccch-HhhhccEE
Confidence 478999999963 35999999999999999999999999999999999999999999999999987765 67789999
Q ss_pred EEecCCCCCcc-cHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCC
Q 047171 1058 LVSQEPTLFAG-TIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPM 1136 (1224)
Q Consensus 1058 ~V~Qdp~LF~g-TIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ 1136 (1224)
|+||++.+|.+ |++||+. ||||||||++||||++++|+
T Consensus 77 ~~~q~~~~~~~~tv~~~~~-----------------------------------------LS~G~~qrv~laral~~~p~ 115 (173)
T cd03230 77 YLPEEPSLYENLTVRENLK-----------------------------------------LSGGMKQRLALAQALLHDPE 115 (173)
T ss_pred EEecCCccccCCcHHHHhh-----------------------------------------cCHHHHHHHHHHHHHHcCCC
Confidence 99999998886 9999984 99999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 047171 1137 ILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKV 1192 (1224)
Q Consensus 1137 ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~I 1192 (1224)
+|||||||++||+.+.+.+.+.|++.. ++.|+|++||+.+.+.. ||+|++|++|++
T Consensus 116 illlDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~th~~~~~~~~~d~i~~l~~g~i 173 (173)
T cd03230 116 LLILDEPTSGLDPESRREFWELLRELKKEGKTILLSSHILEEAERLCDRVAILNNGRI 173 (173)
T ss_pred EEEEeCCccCCCHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHHHhCCEEEEEeCCCC
Confidence 999999999999999999999999875 46899999999999875 999999999974
No 340
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-39 Score=340.42 Aligned_cols=172 Identities=45% Similarity=0.693 Sum_probs=159.6
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCC--HHHHhcc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYN--LRKLRSC 1055 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~--~~~lR~~ 1055 (1224)
|+++|++++|++ .++++|+||++++||+++|+||||||||||+++|+|+++|++|+|.+||.++.+.+ ...+++.
T Consensus 1 i~~~~l~~~~~~---~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~ 77 (178)
T cd03229 1 LELKNVSKRYGQ---KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEEPDSGSILIDGEDLTDLEDELPPLRRR 77 (178)
T ss_pred CEEEEEEEEECC---eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccchhHHHHhhc
Confidence 578999999963 46999999999999999999999999999999999999999999999999998876 5678899
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
++|+||+|.+|. .|++||+.+. ||||||||++||||++++
T Consensus 78 i~~~~q~~~~~~~~t~~~~l~~~---------------------------------------lS~G~~qr~~la~al~~~ 118 (178)
T cd03229 78 IGMVFQDFALFPHLTVLENIALG---------------------------------------LSGGQQQRVALARALAMD 118 (178)
T ss_pred EEEEecCCccCCCCCHHHheeec---------------------------------------CCHHHHHHHHHHHHHHCC
Confidence 999999999886 5999999754 999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCE
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGK 1191 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~ 1191 (1224)
|+++||||||++||+.+...+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|+
T Consensus 119 p~llilDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~ 178 (178)
T cd03229 119 PDVLLLDEPTSALDPITRREVRALLKSLQAQLGITVVLVTHDLDEAARLADRVVVLRDGK 178 (178)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCC
Confidence 999999999999999999999999998764 6899999999999985 99999999985
No 341
>cd03248 ABCC_TAP TAP, the Transporter Associated with Antigen Processing; TAP is essential for peptide delivery from the cytosol into the lumen of the endoplasmic reticulum (ER), where these peptides are loaded on major histocompatibility complex (MHC) I molecules. Loaded MHC I leave the ER and display their antigenic cargo on the cell surface to cytotoxic T cells. Subsequently, virus-infected or malignantly transformed cells can be eliminated. TAP belongs to the large family of ATP-binding cassette (ABC) transporters, which translocate a vast variety of solutes across membranes.
Probab=100.00 E-value=4.4e-39 Score=352.59 Aligned_cols=206 Identities=56% Similarity=0.870 Sum_probs=184.3
Q ss_pred ccccEEEEeEEEECCCC-------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHh
Q 047171 324 LRGEIEFKDVDFSYPTR-------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLR 390 (1224)
Q Consensus 324 ~~~~i~~~~v~f~y~~~-------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r 390 (1224)
..+.++++|++++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|+++...+....+
T Consensus 8 ~~~~l~~~~l~~~~~~~~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~ 87 (226)
T cd03248 8 LKGIVKFQNVTFAYPTRPDTLVLQDVSFTLHPGEVTALVGPSGSGKSTVVALLENFYQPQGGQVLLDGKPISQYEHKYLH 87 (226)
T ss_pred cCceEEEEEEEEEeCCCCCCccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCCCcEEEECCCchHHcCHHHHH
Confidence 34678999999999642 24669999999999999999999999999999999999998877777788
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
+.++|++|++.+|+.|++||+.++.......++.+.+....++++++.+|.|+++.+++++.+||||||||++|||||+.
T Consensus 88 ~~i~~~~q~~~l~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~gl~~~~~~~~~~LSgG~~qrv~laral~~ 167 (226)
T cd03248 88 SKVSLVGQEPVLFARSLQDNIAYGLQSCSFECVKEAAQKAHAHSFISELASGYDTEVGEKGSQLSGGQKQRVAIARALIR 167 (226)
T ss_pred hhEEEEecccHHHhhhHHHHhccccCCCCHHHHHHHHHHcCcHHHHHhccccccchhhcCCCcCCHHHHHHHHHHHHHhc
Confidence 89999999999999999999998765444455555556667889999999999999999999999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceE
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRV 529 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i 529 (1224)
+|++|||||||++||+++...+.+.+.++.+++|+|++||+++.+..||+|++|++|++
T Consensus 168 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~i~~l~~g~i 226 (226)
T cd03248 168 NPQVLILDEATSALDAESEQQVQQALYDWPERRTVLVIAHRLSTVERADQILVLDGGRI 226 (226)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHcCCCEEEEEECCHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999988778999999999999988999999999974
No 342
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=5.1e-39 Score=358.20 Aligned_cols=226 Identities=25% Similarity=0.430 Sum_probs=184.0
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCcc-----CCCCCHHH
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERN-----IKSYNLRK 1051 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~d-----i~~~~~~~ 1051 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+++|++|+|.+||.+ +...+...
T Consensus 3 ~l~~~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 79 (253)
T TIGR02323 3 LLQVSGLSKSYGG---GKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLAPDHGTATYIMRSGAELELYQLSEAE 79 (253)
T ss_pred eEEEeeeEEEeCC---ceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEEecccccccccccCCHHH
Confidence 4899999999963 358999999999999999999999999999999999999999999999988 76666543
Q ss_pred ----HhcceEEEecCCC--C-CcccHHHHHccCC---CCCCHHHHHHHHHHHhHHHHHHhcccccc-cccCCCCCCCChH
Q 047171 1052 ----LRSCIALVSQEPT--L-FAGTIRQNIVYGK---EVATEAEIRKAAVLANAHEFISSTEDGYD-TYCGERGVQLSGG 1120 (1224)
Q Consensus 1052 ----lR~~i~~V~Qdp~--L-F~gTIreNl~~~~---~~~~deei~~al~~a~l~~~I~~lp~gld-t~vge~G~~LSGG 1120 (1224)
+++.++|++|+|. + +..|+.+|+.+.. ......+. ...+.+++..+ |++ +........||||
T Consensus 80 ~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~l~~l--~l~~~~~~~~~~~LSgG 152 (253)
T TIGR02323 80 RRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNI-----RAAAHDWLEEV--EIDPTRIDDLPRAFSGG 152 (253)
T ss_pred HHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHH-----HHHHHHHHHHc--CCChhhhhcCchhcCHH
Confidence 3467999999985 2 3458888885321 00011111 12344555555 343 4566677899999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt 1197 (1224)
||||++|||||+++|++|||||||++||+.+.+.+.+.|++.. .+.|+|+|||+++.+.. ||++++|++|++++.|+
T Consensus 153 ~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~~~~~~~d~~~~l~~G~i~~~~~ 232 (253)
T TIGR02323 153 MQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLGVARLLAQRLLVMQQGRVVESGL 232 (253)
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEECC
Confidence 9999999999999999999999999999999999999998864 37899999999999975 99999999999999999
Q ss_pred hhHHhhcCCCchhHHH
Q 047171 1198 QSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1198 ~~eLl~~~~~g~y~~l 1213 (1224)
++++... +...|.++
T Consensus 233 ~~~~~~~-~~~~~~~~ 247 (253)
T TIGR02323 233 TDQVLDD-PQHPYTQL 247 (253)
T ss_pred HHHHhcC-CCCHHHHH
Confidence 9999865 23445443
No 343
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=2.9e-38 Score=411.28 Aligned_cols=212 Identities=24% Similarity=0.345 Sum_probs=153.2
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHH---------HHhcccCCCCc----e----EEE
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIG---------LIERFYDPQSG----S----VMV 1039 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~---------lL~rl~~p~~G----~----I~i 1039 (1224)
.++++|++. ..|+|+||+|++||.++|+|+||||||||++ .|.|...+..+ . |.|
T Consensus 600 ~L~l~~~~~--------~~Lk~isl~Ip~Geiv~VtG~nGSGKSTLl~~~L~~~l~~~l~~~~~~~~~i~g~~i~~vi~i 671 (1809)
T PRK00635 600 TLTLSKATK--------HNLKDLTISLPLGRLTVVTGVSGSGKSSLINDTLVPAVEEFIEQGFCSNLSIQWGAISRLVHI 671 (1809)
T ss_pred eEEEecccc--------CCccceEEEEcCCcEEEEEcCCCCCHHHHHHHHHHHHHHHHhcCCCcccccccccccceeEEe
Confidence 478888752 2699999999999999999999999999999 55554322111 1 345
Q ss_pred CCccCCCCCH----------HHHh---------cc-----eEEEecC------------------C--------------
Q 047171 1040 DERNIKSYNL----------RKLR---------SC-----IALVSQE------------------P-------------- 1063 (1224)
Q Consensus 1040 dG~di~~~~~----------~~lR---------~~-----i~~V~Qd------------------p-------------- 1063 (1224)
|-.++..-+. +.+| ++ ..+.+|. |
T Consensus 672 dQspigr~~rS~~atY~g~fd~IR~lFA~~~~ak~~g~~~~~fsfn~~gG~C~~c~g~g~i~v~m~~~~v~c~~C~GkRy 751 (1809)
T PRK00635 672 TRDLPGRSQRSIPLTYIKAFDDLRELFAEQPRSKRLGLTKSHFSFNTPLGACAECQGLGSITTTDNRTSIPCPSCLGKRF 751 (1809)
T ss_pred cCCCCCCCCCCCceeehhhhHHHHHHHhhChHHHHcCCCcceeeecCCCCCCCcceeeEEEEEecCCceEECCccCCccc
Confidence 5444332111 1333 11 1122221 1
Q ss_pred ------CCCc-ccHHHHHccCCCCC-----CHHHHHHHHHHHhHHHHHHhcccccccc-cCCCCCCCChHHHHHHHHHHH
Q 047171 1064 ------TLFA-GTIRQNIVYGKEVA-----TEAEIRKAAVLANAHEFISSTEDGYDTY-CGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1064 ------~LF~-gTIreNl~~~~~~~-----~deei~~al~~a~l~~~I~~lp~gldt~-vge~G~~LSGGQrQRlaLARA 1130 (1224)
..+. .||.|||.++...+ +.+++.+.++ .+..+ |++.. .++...+||||||||++||||
T Consensus 752 ~~e~L~~~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l~------~L~~v--GL~~l~l~q~~~tLSGGE~QRV~LAra 823 (1809)
T PRK00635 752 LPQVLEVRYKGKNIADILEMTAYEAEKFFLDEPSIHEKIH------ALCSL--GLDYLPLGRPLSSLSGGEIQRLKLAYE 823 (1809)
T ss_pred CHHHHhhccCCCCHHHHHHcCHHHHHHcccChHHHHHHHH------HHHHc--CCcchhhcCccccCCHHHHHHHHHHHH
Confidence 1232 48899998763211 1233333321 12222 66654 678888999999999999999
Q ss_pred Hc---cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEEe------CCEEEEecChhH
Q 047171 1131 VL---KNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQKADNIVVIK------NGKVVEQGTQSS 1200 (1224)
Q Consensus 1131 ll---~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~aD~I~vl~------~G~Ive~Gt~~e 1200 (1224)
|+ ++|++|||||||++||+.+.+.+.+.|+++. +|.|+|+|+|+++.++.||+|++|. +|++++.|++++
T Consensus 824 L~~~~~~P~LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~~i~~aDrVi~L~p~gg~~~G~iv~~Gtpee 903 (1809)
T PRK00635 824 LLAPSKKPTLYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMHVVKVADYVLELGPEGGNLGGYLLASCSPEE 903 (1809)
T ss_pred HhhcCCCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEccCCCCCCCEEEEeCCHHH
Confidence 98 5999999999999999999999999998875 5889999999999998899999996 799999999999
Q ss_pred Hhhc
Q 047171 1201 LLSM 1204 (1224)
Q Consensus 1201 Ll~~ 1204 (1224)
+...
T Consensus 904 l~~~ 907 (1809)
T PRK00635 904 LIHL 907 (1809)
T ss_pred HHhc
Confidence 9863
No 344
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.6e-39 Score=372.30 Aligned_cols=191 Identities=27% Similarity=0.402 Sum_probs=162.8
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cHHHHHhcCCCC--C
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SIKENILIGKPG--A 418 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~~--~ 418 (1224)
++++++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. +++||||+|++.+|+. ||+|||.|+... .
T Consensus 29 ~Ge~~~llG~sGsGKSTLLr~iaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~ 106 (356)
T PRK11650 29 DGEFIVLVGPSGCGKSTLLRMVAGLERITSGEIWIGGRVVNELEPA--DRDIAMVFQNYALYPHMSVRENMAYGLKIRGM 106 (356)
T ss_pred CCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEEEEeCCccccCCCCHHHHHHhHHhhcCC
Confidence 5679999999999999999999999999999999999999887754 4689999999999964 999999997531 2
Q ss_pred CHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 047171 419 SMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQ 498 (1224)
Q Consensus 419 ~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~ 498 (1224)
+.++..+ .+.+.++.+ |++......+.+|||||||||+|||||+.+|++||||||||+||+.+...+.+.|++
T Consensus 107 ~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~ 179 (356)
T PRK11650 107 PKAEIEE-----RVAEAARIL--ELEPLLDRKPRELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQR 179 (356)
T ss_pred CHHHHHH-----HHHHHHHHc--CChhHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHH
Confidence 2222211 123344444 555566777789999999999999999999999999999999999999999999987
Q ss_pred HcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 499 ASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 499 ~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+.+ |.|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 180 l~~~~g~tii~vTHd~~ea~~l~D~i~vl~~G~i~~~g~~~~~~~~ 225 (356)
T PRK11650 180 LHRRLKTTSLYVTHDQVEAMTLADRVVVMNGGVAEQIGTPVEVYEK 225 (356)
T ss_pred HHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEECCHHHHHhC
Confidence 643 8999999999998865 999999999999999999999875
No 345
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-39 Score=370.31 Aligned_cols=206 Identities=30% Similarity=0.475 Sum_probs=171.0
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
.|+++||+++|++. +++++++|+||||||||||+++|+|+++|++|+|.+||.++.+.++. +++||||
T Consensus 6 ~l~~~~l~~~~~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig~v 83 (351)
T PRK11432 6 FVVLKNITKRFGSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPTEGQIFIDGEDVTHRSIQ--QRDICMV 83 (351)
T ss_pred EEEEEeEEEEECCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEEEE
Confidence 36666666666432 25679999999999999999999999999999999999999876643 5789999
Q ss_pred cCCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 047171 397 NQEPILFST-SIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPK 473 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ 473 (1224)
+|++.+|+. ||+|||.|+.. ..+.++..+ .+++.++.+ |+.......+.+|||||||||||||||+.+|+
T Consensus 84 fQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~~--gl~~~~~r~~~~LSgGq~QRVaLARaL~~~P~ 156 (351)
T PRK11432 84 FQSYALFPHMSLGENVGYGLKMLGVPKEERKQ-----RVKEALELV--DLAGFEDRYVDQISGGQQQRVALARALILKPK 156 (351)
T ss_pred eCCcccCCCCCHHHHHHHHHhHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHcCCC
Confidence 999999975 99999999743 122222221 122334443 45555667788999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 474 ILLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 474 ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+||||||||+||+.+...+.+.|+++.+ |+|+|+|||+++++.. ||+|++|++|+|++.|+++++.+.
T Consensus 157 lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~e~~~laD~i~vm~~G~i~~~g~~~~~~~~ 227 (351)
T PRK11432 157 VLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQSEAFAVSDTVIVMNKGKIMQIGSPQELYRQ 227 (351)
T ss_pred EEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999988743 8999999999999865 999999999999999999999875
No 346
>cd03228 ABCC_MRP_Like The MRP (Mutidrug Resistance Protein)-like transporters are involved in drug, peptide, and lipid export. They belong to the subfamily C of the ATP-binding cassette (ABC) superfamily of transport proteins. The ABCC subfamily contains transporters with a diverse functional spectrum that includes ion transport, cell surface receptor, and toxin secretion activities. The MRP-like family, simlar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains, each composed of six transmembrane (TM) helices, and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-39 Score=337.13 Aligned_cols=171 Identities=55% Similarity=0.910 Sum_probs=161.4
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++. ..++++|+||+|++||.++|+||||||||||+++|.|+++|++|+|.++|.++...+...+|++++
T Consensus 1 l~~~~l~~~~~~~-~~~~l~~i~~~i~~G~~~~l~G~nGsGKstLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 79 (171)
T cd03228 1 IEFKNVSFSYPGR-PKPVLKDVSLTIKPGEKVAIVGPSGSGKSTLLKLLLRLYDPTSGEILIDGVDLRDLDLESLRKNIA 79 (171)
T ss_pred CEEEEEEEEcCCC-CcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCCCEEEECCEEhhhcCHHHHHhhEE
Confidence 4789999999643 236899999999999999999999999999999999999999999999999998888888899999
Q ss_pred EEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 047171 1058 LVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMI 1137 (1224)
Q Consensus 1058 ~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~I 1137 (1224)
|++|++.+|+.|+.||+ ||||||||++||||++++|++
T Consensus 80 ~~~~~~~~~~~t~~e~l------------------------------------------LS~G~~~rl~la~al~~~p~l 117 (171)
T cd03228 80 YVPQDPFLFSGTIRENI------------------------------------------LSGGQRQRIAIARALLRDPPI 117 (171)
T ss_pred EEcCCchhccchHHHHh------------------------------------------hCHHHHHHHHHHHHHhcCCCE
Confidence 99999999999999998 999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 047171 1138 LLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGK 1191 (1224)
Q Consensus 1138 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~ 1191 (1224)
|||||||++||+.+.+.+.+.|++..+++|+|++||+++.+..||++++|++|+
T Consensus 118 lllDEP~~gLD~~~~~~l~~~l~~~~~~~tii~~sh~~~~~~~~d~~~~l~~g~ 171 (171)
T cd03228 118 LILDEATSALDPETEALILEALRALAKGKTVIVIAHRLSTIRDADRIIVLDDGR 171 (171)
T ss_pred EEEECCCcCCCHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHhCCEEEEEcCCC
Confidence 999999999999999999999998877899999999999998899999999985
No 347
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=3.5e-39 Score=371.98 Aligned_cols=205 Identities=29% Similarity=0.455 Sum_probs=172.8
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEec
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVN 397 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 397 (1224)
|+++||+++|++. +++++++|+||||||||||+++|+|+++|++|+|.+||+++.+.++. ++.||||+
T Consensus 5 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~~G~I~i~g~~~~~~~~~--~r~ig~v~ 82 (353)
T TIGR03265 5 LSIDNIRKRFGAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQTAGTIYQGGRDITRLPPQ--KRDYGIVF 82 (353)
T ss_pred EEEEEEEEEeCCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCCceEEEECCEECCCCCHH--HCCEEEEe
Confidence 4555555555432 25679999999999999999999999999999999999999877654 57899999
Q ss_pred CCCCCCc-ccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 398 QEPILFS-TSIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 398 Q~~~lf~-~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
|++.+|+ .||+|||.|+... .+.++. ...+++.++.+ |++......+.+||||||||+||||||+.+|++
T Consensus 83 Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~-----~~~~~~~l~~l--~L~~~~~~~~~~LSgGq~QRvaLARaL~~~P~l 155 (353)
T TIGR03265 83 QSYALFPNLTVADNIAYGLKNRGMGRAEV-----AERVAELLDLV--GLPGSERKYPGQLSGGQQQRVALARALATSPGL 155 (353)
T ss_pred CCcccCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCCchhhCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999996 5999999997431 122222 12344556666 677777888999999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 475 LLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++++.. ||+|++|++|++++.|+++++.+.
T Consensus 156 lLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~ea~~l~d~i~vl~~G~i~~~g~~~~~~~~ 225 (353)
T TIGR03265 156 LLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQEEALSMADRIVVMNHGVIEQVGTPQEIYRH 225 (353)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999999999999988643 8999999999999865 999999999999999999999875
No 348
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=4e-39 Score=351.96 Aligned_cols=205 Identities=27% Similarity=0.408 Sum_probs=175.7
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
++++||+++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.... ++.++
T Consensus 1 l~l~~v~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~~~~~~~----~~~~~ 73 (223)
T TIGR03740 1 LETKNLSKRFGK---QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPTSGEIIFDGHPWTRKD----LHKIG 73 (223)
T ss_pred CEEEeEEEEECC---EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEeccccc----cccEE
Confidence 478999999963 46999999999999999999999999999999999999999999999998875322 35799
Q ss_pred EEecCCCCCc-ccHHHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
|+||++.+|. .|++||+.++.. ..+++++.++++..++.+.. .....+||||||||++||||++++
T Consensus 74 ~~~q~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-----------~~~~~~LS~G~~~rv~laral~~~ 142 (223)
T TIGR03740 74 SLIESPPLYENLTARENLKVHTTLLGLPDSRIDEVLNIVDLTNTG-----------KKKAKQFSLGMKQRLGIAIALLNH 142 (223)
T ss_pred EEcCCCCccccCCHHHHHHHHHHHcCCCHHHHHHHHHHcCCcHHH-----------hhhHhhCCHHHHHHHHHHHHHhcC
Confidence 9999998886 699999976421 22455666666665554432 233457999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhH
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSS 1200 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~e 1200 (1224)
|++|||||||++||+.+.+.+.+.|++.. +++|+|++||+++.+.. ||+|++|++|++++.|++.+
T Consensus 143 p~llllDEP~~~LD~~~~~~l~~~L~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~ 210 (223)
T TIGR03740 143 PKLLILDEPTNGLDPIGIQELRELIRSFPEQGITVILSSHILSEVQQLADHIGIISEGVLGYQGKINK 210 (223)
T ss_pred CCEEEECCCccCCCHHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEeCCEEEEecChhh
Confidence 99999999999999999999999999875 47899999999999865 99999999999999998865
No 349
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-39 Score=343.11 Aligned_cols=228 Identities=32% Similarity=0.516 Sum_probs=194.0
Q ss_pred cEEEEEEEEECCCCCCc---------------------cceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCc
Q 047171 977 FIELKNVFFSYPSRPDQ---------------------MIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSG 1035 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~---------------------~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G 1035 (1224)
.|+++||+.-|..++.. .-++|+||+|+.||+..|.|-||||||||++++.|+++|++|
T Consensus 4 ~i~i~nv~kiFG~~~~~a~~~~~~G~~k~ei~~~tg~vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept~G 83 (386)
T COG4175 4 KIEIKNVYKIFGKNPKRALKLLDQGKSKAEILKKTGLVVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTRG 83 (386)
T ss_pred eEEeecceeecccCHHHHHHHHHcCCcHHHHHHhhCcEEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCCCc
Confidence 47888888777533211 237899999999999999999999999999999999999999
Q ss_pred eEEECCccCCCCCHHHHh----cceEEEecCCCCCc-ccHHHHHccCCC--CCC----HHHHHHHHHHHhHHHHHHhccc
Q 047171 1036 SVMVDERNIKSYNLRKLR----SCIALVSQEPTLFA-GTIRQNIVYGKE--VAT----EAEIRKAAVLANAHEFISSTED 1104 (1224)
Q Consensus 1036 ~I~idG~di~~~~~~~lR----~~i~~V~Qdp~LF~-gTIreNl~~~~~--~~~----deei~~al~~a~l~~~I~~lp~ 1104 (1224)
+|++||.|+..++.++|| +++++|+|..-||. -||.||..||.. ..+ ++...++++.+++++|-.+.|
T Consensus 84 ~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLlPhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~yp- 162 (386)
T COG4175 84 EILVDGKDIAKLSAAELRELRRKKISMVFQSFALLPHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKYP- 162 (386)
T ss_pred eEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccccchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcCc-
Confidence 999999999999988764 67999999999886 799999999853 222 344567788888888766655
Q ss_pred ccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhh-hhc
Q 047171 1105 GYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTI-QKA 1181 (1224)
Q Consensus 1105 gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti-~~a 1181 (1224)
.+||||+|||+.|||||..+|+|||+|||.|||||--...+|+-|.++-+ +||+++|||+|++. +--
T Consensus 163 ----------~eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG 232 (386)
T COG4175 163 ----------NELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIG 232 (386)
T ss_pred ----------ccccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhcc
Confidence 46999999999999999999999999999999999999999998876642 78999999999986 559
Q ss_pred CEEEEEeCCEEEEecChhHHhhcCCCchhHHHHH
Q 047171 1182 DNIVVIKNGKVVEQGTQSSLLSMGNGGAYYSLIK 1215 (1224)
Q Consensus 1182 D~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~l~~ 1215 (1224)
|||..|++|+|+..|||+|.+.++.+.+-+++++
T Consensus 233 ~rIaimkdG~ivQ~Gtp~eIl~~PAndYV~~Fv~ 266 (386)
T COG4175 233 DRIAIMKDGEIVQVGTPEEILLNPANDYVRDFVR 266 (386)
T ss_pred ceEEEecCCeEEEeCCHHHHHcCccHHHHHHHHh
Confidence 9999999999999999999998854554445543
No 350
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.6e-39 Score=348.54 Aligned_cols=204 Identities=30% Similarity=0.457 Sum_probs=169.2
Q ss_pred EEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCC----CHHHHhc
Q 047171 979 ELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSY----NLRKLRS 1054 (1224)
Q Consensus 979 ~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~----~~~~lR~ 1054 (1224)
++ ||+++|++ ..+ |+||+|++ |+++|+||||||||||+++|+|+++|++|+|.++|.++... +...+|+
T Consensus 3 ~~-~l~~~~~~---~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~ 75 (214)
T cd03297 3 CV-DIEKRLPD---FTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPDGGTIVLNGTVLFDSRKKINLPPQQR 75 (214)
T ss_pred ee-eeeEecCC---eee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEecccccchhhhhhHhh
Confidence 45 89999964 234 99999999 99999999999999999999999999999999999988643 2345788
Q ss_pred ceEEEecCCCCCc-ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1055 CIALVSQEPTLFA-GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~-gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
+++|+||++.+|. .|++||+.++......++. ...+.+++..+ |++........+||||||||++||||+++
T Consensus 76 ~i~~~~q~~~~~~~~t~~~~l~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~ 148 (214)
T cd03297 76 KIGLVFQQYALFPHLNVRENLAFGLKRKRNRED-----RISVDELLDLL--GLDHLLNRYPAQLSGGEKQRVALARALAA 148 (214)
T ss_pred cEEEEecCCccCCCCCHHHHHHHHHhhCCHHHH-----HHHHHHHHHHc--CCHhHhhcCcccCCHHHHHHHHHHHHHhc
Confidence 9999999999986 6999999875322221111 11223344333 45555556778899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
+|++|||||||++||+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||++++|++|+++++|
T Consensus 149 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g 214 (214)
T cd03297 149 QPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDLSEAEYLADRIVVMEDGRLQYIG 214 (214)
T ss_pred CCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 9999999999999999999999999998753 7899999999999865 9999999999999876
No 351
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=5.2e-39 Score=354.58 Aligned_cols=207 Identities=30% Similarity=0.533 Sum_probs=172.5
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHH-hcccEEecCCCCCCcc-c
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWL-RSQMGLVNQEPILFST-S 406 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i~~v~Q~~~lf~~-t 406 (1224)
.++|++|... +++++||+||||||||||+++|+|+++|++|+|.++|.++...+.... +..++||+|++.+|+. |
T Consensus 15 ~l~~vsl~i~---~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (236)
T cd03219 15 ALDDVSFSVR---PGEIHGLIGPNGAGKTTLFNLISGFLRPTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPELT 91 (236)
T ss_pred EecCceEEec---CCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCCC
Confidence 4566666653 567999999999999999999999999999999999999988776554 5679999999999886 9
Q ss_pred HHHHHhcCCCCCCHHHH-------HHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 047171 407 IKENILIGKPGASMETV-------VKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDE 479 (1224)
Q Consensus 407 i~~ni~~g~~~~~~~~~-------~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE 479 (1224)
++||+.++........+ ........+++.++.+ |++...+....+||||||||++|||||+.+|++|||||
T Consensus 92 v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDE 169 (236)
T cd03219 92 VLENVMVAAQARTGSGLLLARARREEREARERAEELLERV--GLADLADRPAGELSYGQQRRLEIARALATDPKLLLLDE 169 (236)
T ss_pred HHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHc--CccchhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 99999886431110000 0111122345667766 77777788899999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 480 ATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 480 ~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
||++||+.+.+.+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 170 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 232 (236)
T cd03219 170 PAAGLNPEETEELAELIRELRERGITVLLVEHDMDVVMSLADRVTVLDQGRVIAEGTPDEVRN 232 (236)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEeecCHHHhcc
Confidence 999999999999999998865 68999999999999976 99999999999999999998864
No 352
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=4.9e-39 Score=342.40 Aligned_cols=183 Identities=31% Similarity=0.527 Sum_probs=162.5
Q ss_pred cEEEEEEEEECCCCC---CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhccc--CCCCceEEECCccCCCCCHHH
Q 047171 977 FIELKNVFFSYPSRP---DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFY--DPQSGSVMVDERNIKSYNLRK 1051 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~---~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~--~p~~G~I~idG~di~~~~~~~ 1051 (1224)
.|+++||+|+|+... ..++|+|+||+|++||+++|+||||||||||+++|+|++ +|++|+|.+||.++.. ..
T Consensus 3 ~l~~~~ls~~~~~~~~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~~G~i~~~g~~~~~---~~ 79 (194)
T cd03213 3 TLSFRNLTVTVKSSPSKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGVSGEVLINGRPLDK---RS 79 (194)
T ss_pred EEEEEeeEEEEecCCCcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCceEEEECCEeCch---Hh
Confidence 489999999997420 246999999999999999999999999999999999999 9999999999998864 36
Q ss_pred HhcceEEEecCCCCCc-ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1052 LRSCIALVSQEPTLFA-GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1052 lR~~i~~V~Qdp~LF~-gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
+|++++|+||++.+|. .|++||+.++.. +. .||||||||++||||
T Consensus 80 ~~~~i~~~~q~~~~~~~~t~~~~i~~~~~---------------~~-------------------~LS~G~~qrv~lara 125 (194)
T cd03213 80 FRKIIGYVPQDDILHPTLTVRETLMFAAK---------------LR-------------------GLSGGERKRVSIALE 125 (194)
T ss_pred hhheEEEccCcccCCCCCcHHHHHHHHHH---------------hc-------------------cCCHHHHHHHHHHHH
Confidence 7889999999999886 599999965310 00 799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCch-hhh-hcCEEEEEeCCEEEEec
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLS-TIQ-KADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~-ti~-~aD~I~vl~~G~Ive~G 1196 (1224)
++++|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++ .+. .||++++|++|++++.|
T Consensus 126 l~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~G~i~~~~ 194 (194)
T cd03213 126 LVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQGRVIYFG 194 (194)
T ss_pred HHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeCCEEEecC
Confidence 999999999999999999999999999999875 4889999999997 554 49999999999998765
No 353
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=4.1e-38 Score=346.39 Aligned_cols=170 Identities=23% Similarity=0.420 Sum_probs=132.2
Q ss_pred eeceeEEE-----eCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCC-CCccc
Q 047171 996 FKGLTLKI-----EAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPT-LFAGT 1069 (1224)
Q Consensus 996 L~~isl~I-----~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~-LF~gT 1069 (1224)
+.+..|++ ..||.++++||||-||||++++|.|..+|++|+ ..++ +++|=||--. -|+||
T Consensus 352 ~g~F~L~V~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikPdeg~----~~~~----------~vSyKPQyI~~~~~gt 417 (591)
T COG1245 352 YGDFKLEVEEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKPDEGS----EEDL----------KVSYKPQYISPDYDGT 417 (591)
T ss_pred cCceEEEecCCeeecceEEEEECCCCcchHHHHHHHhccccCCCCC----Cccc----------eEeecceeecCCCCCc
Confidence 34555554 557889999999999999999999999999998 3333 4899999742 48999
Q ss_pred HHHHHccCCCC-CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCC
Q 047171 1070 IRQNIVYGKEV-ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALD 1148 (1224)
Q Consensus 1070 IreNl~~~~~~-~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD 1148 (1224)
|++-+.-..+. ..+.-.+. |.+ -|-.++..+...-.+|||||.||+|||-||.|++++.|||||++.||
T Consensus 418 V~~~l~~~~~~~~~~s~~~~--------ei~--~pl~l~~i~e~~v~~LSGGELQRvaIaa~L~reADlYllDEPSA~LD 487 (591)
T COG1245 418 VEDLLRSAIRSAFGSSYFKT--------EIV--KPLNLEDLLERPVDELSGGELQRVAIAAALSREADLYLLDEPSAYLD 487 (591)
T ss_pred HHHHHHHhhhhhcccchhHH--------hhc--CccchHHHHhcccccCCchhHHHHHHHHHhccccCEEEecCchhhcc
Confidence 99977543222 11111111 111 13344444445556799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeC
Q 047171 1149 SASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKN 1189 (1224)
Q Consensus 1149 ~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~ 1189 (1224)
.+..-.+-++|++.. .++|.++|-|++..+.. +||++|++.
T Consensus 488 vEqR~~vakvIRR~~e~~~kta~vVdHDi~~~dyvsDr~ivF~G 531 (591)
T COG1245 488 VEQRIIVAKVIRRFIENNEKTALVVDHDIYMIDYVSDRLIVFEG 531 (591)
T ss_pred HHHHHHHHHHHHHHHhhcCceEEEEecceehhhhhhceEEEEec
Confidence 999999999998876 47899999999999987 999999973
No 354
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=4.2e-39 Score=353.01 Aligned_cols=200 Identities=36% Similarity=0.560 Sum_probs=163.7
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCC-----CCCCcEEEECCEecCCCC--HHHHhcccEEecCCCC
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFY-----DPVKGNILLDGHKIKKLQ--LKWLRSQMGLVNQEPI 401 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~-----~~~~G~i~~~g~~~~~~~--~~~~r~~i~~v~Q~~~ 401 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|++ +|++|+|.++|+++...+ ...+|++++|++|++.
T Consensus 15 ~l~~vsl~i~---~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~ 91 (227)
T cd03260 15 ALKDISLDIP---KGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKPN 91 (227)
T ss_pred eeeeeEEEEc---CCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCCeEEEECCEEhhhcchHHHHHHhhEEEEecCch
Confidence 4666666653 57799999999999999999999999 999999999999998776 5667889999999999
Q ss_pred CCcccHHHHHhcCCCCC---CHHHHHHHHHHhcHHHHHHhccccccccccCC--CCCCChHHHHHHHHHHHhccCCCEEE
Q 047171 402 LFSTSIKENILIGKPGA---SMETVVKAAQAANVHDFIMKLNDGYETKVGQF--GVQLSGGQKQRIAIARALIRDPKILL 476 (1224)
Q Consensus 402 lf~~ti~~ni~~g~~~~---~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~--g~~LSgGq~qriaiARal~~~~~ili 476 (1224)
+|+.|++||+.++.... ..++.. ..+.+.++.+ |++...... +.+||||||||++|||||+.+|++||
T Consensus 92 ~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lll 164 (227)
T cd03260 92 PFPGSIYDNVAYGLRLHGIKLKEELD-----ERVEEALRKA--ALWDEVKDRLHALGLSGGQQQRLCLARALANEPEVLL 164 (227)
T ss_pred hccccHHHHHHhHHHhcCCCcHHHHH-----HHHHHHHHHc--CCChHHhccCCcccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 89779999998763211 111111 1122334443 444334444 58999999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHH
Q 047171 477 LDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVL 538 (1224)
Q Consensus 477 lDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l 538 (1224)
|||||++||+++...+.+.|+++.+.+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 165 lDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 227 (227)
T cd03260 165 LDEPTSALDPISTAKIEELIAELKKEYTIVIVTHNMQQAARVADRTAFLLNGRLVEFGPTEQI 227 (227)
T ss_pred EeCCCccCCHHHHHHHHHHHHHHhhCcEEEEEeccHHHHHHhCCEEEEEeCCEEEEecCcccC
Confidence 99999999999999999999987655899999999999875 999999999999999987653
No 355
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.8e-39 Score=312.50 Aligned_cols=191 Identities=28% Similarity=0.499 Sum_probs=167.9
Q ss_pred CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCcccHH
Q 047171 992 DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFAGTIR 1071 (1224)
Q Consensus 992 ~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~gTIr 1071 (1224)
+.++|+|+||++++||.++|.||||||||||++.++-+..|++|++++.|.|++.++++.+|++|+||-|.|.||.+||.
T Consensus 15 ~a~il~~isl~v~~Ge~iaitGPSG~GKStllk~va~Lisp~~G~l~f~Ge~vs~~~pea~Rq~VsY~~Q~paLfg~tVe 94 (223)
T COG4619 15 DAKILNNISLSVRAGEFIAITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDVSTLKPEAYRQQVSYCAQTPALFGDTVE 94 (223)
T ss_pred CCeeecceeeeecCCceEEEeCCCCccHHHHHHHHHhccCCCCceEEEcCccccccChHHHHHHHHHHHcCccccccchh
Confidence 56799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHccCC----CCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCC
Q 047171 1072 QNIVYGK----EVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSAL 1147 (1224)
Q Consensus 1072 eNl~~~~----~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaL 1147 (1224)
||+.|.- ...+...-.+.++.+++. ++.+..+..+||||||||+||+|-|---|+||+|||+||+|
T Consensus 95 DNlifP~~~r~rr~dr~aa~~llar~~l~----------~~~L~k~it~lSGGE~QriAliR~Lq~~P~ILLLDE~TsAL 164 (223)
T COG4619 95 DNLIFPWQIRNRRPDRAAALDLLARFALP----------DSILTKNITELSGGEKQRIALIRNLQFMPKILLLDEITSAL 164 (223)
T ss_pred hccccchHHhccCCChHHHHHHHHHcCCc----------hhhhcchhhhccchHHHHHHHHHHhhcCCceEEecCchhhc
Confidence 9998752 122222223333333332 34555667789999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHhc--CCCeEEEEccCchh-hhhcCEEEEEeCCEE
Q 047171 1148 DSASENLVQEALEKMM--VGRTCVVVAHRLST-IQKADNIVVIKNGKV 1192 (1224)
Q Consensus 1148 D~~te~~I~~~l~~~~--~~~TvI~IaHrl~t-i~~aD~I~vl~~G~I 1192 (1224)
|+.+.+.|.+.|.++. ++..++.|||+.+. ++.+|+++-+..|++
T Consensus 165 D~~nkr~ie~mi~~~v~~q~vAv~WiTHd~dqa~rha~k~itl~~G~~ 212 (223)
T COG4619 165 DESNKRNIEEMIHRYVREQNVAVLWITHDKDQAIRHADKVITLQPGHA 212 (223)
T ss_pred ChhhHHHHHHHHHHHhhhhceEEEEEecChHHHhhhhheEEEeccCcc
Confidence 9999999999999887 46799999999988 888999999999976
No 356
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.3e-39 Score=348.69 Aligned_cols=227 Identities=26% Similarity=0.439 Sum_probs=182.9
Q ss_pred EEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccC-C----CCceEEECCccCCCCCHHH
Q 047171 978 IELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYD-P----QSGSVMVDERNIKSYNLRK 1051 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~-p----~~G~I~idG~di~~~~~~~ 1051 (1224)
++++|++..|+... ...+++||||+|++||++||||.|||||||+.++++|+.+ | .+|+|.++|.|+-+++.+.
T Consensus 2 L~v~nL~v~f~~~~g~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~ 81 (316)
T COG0444 2 LEVKNLSVSFPTDAGVVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKE 81 (316)
T ss_pred ceEeeeEEEEecCCccEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHH
Confidence 67899999997542 2468999999999999999999999999999999999998 4 5799999999999999876
Q ss_pred Hh----cceEEEecCCC-CCc--ccHHHHH----ccCCCCCC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCC
Q 047171 1052 LR----SCIALVSQEPT-LFA--GTIRQNI----VYGKEVAT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQ 1116 (1224)
Q Consensus 1052 lR----~~i~~V~Qdp~-LF~--gTIreNl----~~~~~~~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~ 1116 (1224)
+| +.|++|||||. =|+ -||.+-+ .......+ .++..+.++.+++.+- +..+..-..+
T Consensus 82 ~~~iRG~~I~mIfQ~p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~--------~~~~~~YPhe 153 (316)
T COG0444 82 LRKIRGKEIAMIFQDPMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDP--------ERRLKSYPHE 153 (316)
T ss_pred HHhhcCceEEEEEcCchhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCH--------HHHHhhCCcc
Confidence 43 48999999995 222 2444433 32111101 2234555555554321 1133455678
Q ss_pred CChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEE
Q 047171 1117 LSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVV 1193 (1224)
Q Consensus 1117 LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Iv 1193 (1224)
||||||||+.||-|++.+|++||.||||+|||..+++.|.+.|+++.+ |.|+|+|||++..+.. ||||+||.+|+||
T Consensus 154 lSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~vva~~aDri~VMYaG~iV 233 (316)
T COG0444 154 LSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGVVAEIADRVAVMYAGRIV 233 (316)
T ss_pred cCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcceEEEEECcEEE
Confidence 999999999999999999999999999999999999999999998874 8899999999999876 9999999999999
Q ss_pred EecChhHHhhcCCCchhHHH
Q 047171 1194 EQGTQSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1194 e~Gt~~eLl~~~~~g~y~~l 1213 (1224)
|.|+.++++++ +...|.+.
T Consensus 234 E~g~~~~i~~~-P~HPYT~~ 252 (316)
T COG0444 234 EEGPVEEIFKN-PKHPYTRG 252 (316)
T ss_pred EeCCHHHHhcC-CCChHHHH
Confidence 99999999988 45556544
No 357
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=1.5e-38 Score=351.89 Aligned_cols=208 Identities=24% Similarity=0.415 Sum_probs=179.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.++| +..+
T Consensus 4 ~l~~~~l~~~~~~---~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~~-----------~~~i 69 (251)
T PRK09544 4 LVSLENVSVSFGQ---RRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVAPDEGVIKRNG-----------KLRI 69 (251)
T ss_pred EEEEeceEEEECC---ceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECC-----------ccCE
Confidence 4899999999963 4599999999999999999999999999999999999999999999987 2469
Q ss_pred EEEecCCCCCc---ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1057 ALVSQEPTLFA---GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1057 ~~V~Qdp~LF~---gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
+|+||++.++. .|+++|+.+. +..+++++.++++..++.+++.. ....||||||||++||||+++
T Consensus 70 ~~v~q~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~gl~~~~~~-----------~~~~LSgGq~qrv~laral~~ 137 (251)
T PRK09544 70 GYVPQKLYLDTTLPLTVNRFLRLR-PGTKKEDILPALKRVQAGHLIDA-----------PMQKLSGGETQRVLLARALLN 137 (251)
T ss_pred EEeccccccccccChhHHHHHhcc-ccccHHHHHHHHHHcCChHHHhC-----------ChhhCCHHHHHHHHHHHHHhc
Confidence 99999998765 4899998654 33456777888877777655432 345799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchh
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAY 1210 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y 1210 (1224)
+|++|||||||++||+.+.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++ ++++.|+++++.. +..|
T Consensus 138 ~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~~i~~~~d~i~~l~~-~i~~~g~~~~~~~---~~~~ 213 (251)
T PRK09544 138 RPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLHLVMAKTDEVLCLNH-HICCSGTPEVVSL---HPEF 213 (251)
T ss_pred CCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEECC-ceEeeCCHHHHhC---CHHH
Confidence 9999999999999999999999999988753 7899999999999865 999999964 7999999999875 3556
Q ss_pred HHHH
Q 047171 1211 YSLI 1214 (1224)
Q Consensus 1211 ~~l~ 1214 (1224)
.+++
T Consensus 214 ~~~~ 217 (251)
T PRK09544 214 ISMF 217 (251)
T ss_pred HHHh
Confidence 6665
No 358
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.7e-39 Score=341.53 Aligned_cols=182 Identities=25% Similarity=0.447 Sum_probs=161.4
Q ss_pred cEEEEEEEEECCCCC-CccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhccc--CCCCceEEECCccCCCCCHHHHh
Q 047171 977 FIELKNVFFSYPSRP-DQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFY--DPQSGSVMVDERNIKSYNLRKLR 1053 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~-~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~--~p~~G~I~idG~di~~~~~~~lR 1053 (1224)
.|+++|++++|+++. +.++|+|+||+|++||+++|+|+||||||||+++|+|++ +|++|+|.+||.++. ..+|
T Consensus 3 ~l~~~~l~~~~~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~----~~~~ 78 (192)
T cd03232 3 VLTWKNLNYTVPVKGGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD----KNFQ 78 (192)
T ss_pred EEEEeeeEEEecCCCCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH----HHhh
Confidence 489999999997421 246999999999999999999999999999999999986 489999999999875 5678
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
++++|++|++.+|. .|++||+.++.. ++ +||||||||++||||++
T Consensus 79 ~~i~~~~q~~~~~~~~tv~~~l~~~~~----------~~------------------------~LSgGe~qrv~la~al~ 124 (192)
T cd03232 79 RSTGYVEQQDVHSPNLTVREALRFSAL----------LR------------------------GLSVEQRKRLTIGVELA 124 (192)
T ss_pred hceEEecccCccccCCcHHHHHHHHHH----------Hh------------------------cCCHHHhHHHHHHHHHh
Confidence 89999999998887 499999985410 00 79999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchh-h-hhcCEEEEEeC-CEEEEec
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLST-I-QKADNIVVIKN-GKVVEQG 1196 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~t-i-~~aD~I~vl~~-G~Ive~G 1196 (1224)
++|++|||||||++||+++.+.+.+.|+++. +++|+|+|||+++. + ..||+|++|++ |++++.|
T Consensus 125 ~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 125 AKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred cCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 9999999999999999999999999999875 47899999999984 4 56999999999 9999876
No 359
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.7e-39 Score=354.05 Aligned_cols=203 Identities=33% Similarity=0.523 Sum_probs=167.7
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCC---CCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYD---PVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST 405 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~---~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ 405 (1224)
.++|++|... ++++++|+||||||||||+++|+|+++ |++|+|.++|+++.+.+....|++|+|++|++.+|+.
T Consensus 17 ~l~~isl~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~~ 93 (246)
T PRK14269 17 ALFDINMQIE---QNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFVK 93 (246)
T ss_pred eeeeeEEEEc---CCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCccccc
Confidence 3455555542 567999999999999999999999984 6999999999999888877888899999999999999
Q ss_pred cHHHHHhcCCCC--C--C----HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEE
Q 047171 406 SIKENILIGKPG--A--S----METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLL 477 (1224)
Q Consensus 406 ti~~ni~~g~~~--~--~----~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ilil 477 (1224)
|++||+.++... . . .+++.+.++..++.+++ .+...+.+.+||||||||++|||||+.+|+++||
T Consensus 94 tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~-------~~~~~~~~~~LS~G~~qrv~laral~~~p~lllL 166 (246)
T PRK14269 94 SIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEV-------KDKLKQNALALSGGQQQRLCIARALAIKPKLLLL 166 (246)
T ss_pred cHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhh-------hHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999999876311 0 0 11222222222222211 2345677899999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 478 DEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 478 DE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||++||+.+...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 167 DEP~~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 231 (246)
T PRK14269 167 DEPTSALDPISSGVIEELLKELSHNLSMIMVTHNMQQGKRVADYTAFFHLGELIEFGESKEFFEN 231 (246)
T ss_pred cCCcccCCHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhCcEEEEEECCEEEEECCHHHHHhC
Confidence 9999999999999999999887778999999999999865 999999999999999999998754
No 360
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=5.6e-39 Score=338.76 Aligned_cols=172 Identities=22% Similarity=0.478 Sum_probs=157.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH-HHHhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL-RKLRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~-~~lR~~ 1055 (1224)
.|+++|++++| +|+|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+. ..+|++
T Consensus 4 ~l~~~~l~~~~-------~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~ 76 (182)
T cd03215 4 VLEVRGLSVKG-------AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRPPASGEITLDGKPVTRRSPRDAIRAG 76 (182)
T ss_pred EEEEeccEEEe-------eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCccCHHHHHhCC
Confidence 48999999998 7999999999999999999999999999999999999999999999999988774 457889
Q ss_pred eEEEecCC----CCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHH
Q 047171 1056 IALVSQEP----TLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAV 1131 (1224)
Q Consensus 1056 i~~V~Qdp----~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAl 1131 (1224)
++|+||++ .++..|++||+.++.. ||||||||++||||+
T Consensus 77 i~~~~q~~~~~~~~~~~t~~e~l~~~~~-------------------------------------LS~G~~qrl~la~al 119 (182)
T cd03215 77 IAYVPEDRKREGLVLDLSVAENIALSSL-------------------------------------LSGGNQQKVVLARWL 119 (182)
T ss_pred eEEecCCcccCcccCCCcHHHHHHHHhh-------------------------------------cCHHHHHHHHHHHHH
Confidence 99999995 3445799999986521 999999999999999
Q ss_pred ccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 047171 1132 LKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKV 1192 (1224)
Q Consensus 1132 l~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~I 1192 (1224)
+++|++|||||||++||+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++
T Consensus 120 ~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~v~~l~~G~i 182 (182)
T cd03215 120 ARDPRVLILDEPTRGVDVGAKAEIYRLIRELADAGKAVLLISSELDELLGLCDRILVMYEGRI 182 (182)
T ss_pred ccCCCEEEECCCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEecCCcC
Confidence 99999999999999999999999999999875 47899999999999977 999999999975
No 361
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome. The peroxisomal membrane forms a permeability barrier for a wide variety of metabolites required for and formed during fatty acid beta-oxidation. To communicate with the cytoplasm and mitochondria, peroxisomes need dedicated proteins to transport such hydrophilic molecules across their membranes. X-linked adrenoleukodystrophy (X-ALD) is caused by mutations in the ALD gene, which encodes ALDP (adrenoleukodystrophy protein ), a peroxisomal integral membrane protein that is a member of the ATP-binding cassette (ABC) transporter protein family. The disease is characterized by a striking and unpredictable variation in phenotypic expression. Phenotypes include the rapidly progressive childhood cerebral form (CCALD), the milder adult form, adrenomyeloneuropathy (AMN), and variants without neurologic involvement (i.e. asympt
Probab=100.00 E-value=1e-38 Score=330.86 Aligned_cols=164 Identities=34% Similarity=0.558 Sum_probs=151.1
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++. .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.++|. ++++
T Consensus 1 i~~~~~~~~~~~~--~~~l~~i~l~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~~~-----------~~i~ 67 (166)
T cd03223 1 IELENLSLATPDG--RVLLKDLSFEIKPGDRLLITGPSGTGKSSLFRALAGLWPWGSGRIGMPEG-----------EDLL 67 (166)
T ss_pred CEEEEEEEEcCCC--CeeeecCeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCC-----------ceEE
Confidence 5789999999632 46999999999999999999999999999999999999999999999983 6799
Q ss_pred EEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCE
Q 047171 1058 LVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMI 1137 (1224)
Q Consensus 1058 ~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~I 1137 (1224)
|+||++.++++|++||+.++ ....||||||||++||||++++|++
T Consensus 68 ~~~q~~~~~~~tv~~nl~~~-----------------------------------~~~~LS~G~~~rv~laral~~~p~~ 112 (166)
T cd03223 68 FLPQRPYLPLGTLREQLIYP-----------------------------------WDDVLSGGEQQRLAFARLLLHKPKF 112 (166)
T ss_pred EECCCCccccccHHHHhhcc-----------------------------------CCCCCCHHHHHHHHHHHHHHcCCCE
Confidence 99999999999999999763 2357999999999999999999999
Q ss_pred EEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeCCE
Q 047171 1138 LLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKNGK 1191 (1224)
Q Consensus 1138 LlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~G~ 1191 (1224)
|||||||++||+++.+.+.+.|++. ++|+|++||+++....||+|++|++|.
T Consensus 113 lllDEPt~~LD~~~~~~l~~~l~~~--~~tiiivsh~~~~~~~~d~i~~l~~~~ 164 (166)
T cd03223 113 VFLDEATSALDEESEDRLYQLLKEL--GITVISVGHRPSLWKFHDRVLDLDGEG 164 (166)
T ss_pred EEEECCccccCHHHHHHHHHHHHHh--CCEEEEEeCChhHHhhCCEEEEEcCCC
Confidence 9999999999999999999999886 689999999999888899999998763
No 362
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=9.1e-39 Score=355.42 Aligned_cols=220 Identities=21% Similarity=0.333 Sum_probs=170.7
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhccc--CCCCceEEECCccCCCCCHHHHh-c
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFY--DPQSGSVMVDERNIKSYNLRKLR-S 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~--~p~~G~I~idG~di~~~~~~~lR-~ 1054 (1224)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|++ +|++|+|.+||.++...+....+ +
T Consensus 2 i~~~nl~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 78 (248)
T PRK09580 2 LSIKDLHVSVED---KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGE 78 (248)
T ss_pred eEEEEEEEEeCC---eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhc
Confidence 789999999963 35999999999999999999999999999999999994 69999999999999888876654 5
Q ss_pred ceEEEecCCCCCcc-cHHHHHccCCCC---C-CHHHHHHHHHHHhHHHHHH--hcccccccccCCCCCCCChHHHHHHHH
Q 047171 1055 CIALVSQEPTLFAG-TIRQNIVYGKEV---A-TEAEIRKAAVLANAHEFIS--STEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~g-TIreNl~~~~~~---~-~deei~~al~~a~l~~~I~--~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
.++|++|++.++.. |..+++...... . ..+.+...-....+.+.+. .+|+++.+... ..+||||||||++|
T Consensus 79 ~i~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--~~~LS~G~~qrv~l 156 (248)
T PRK09580 79 GIFMAFQYPVEIPGVSNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV--NVGFSGGEKKRNDI 156 (248)
T ss_pred ceEEEecCchhccchhHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC--CCCCCHHHHHHHHH
Confidence 79999999987754 544544321100 0 0000000000011112222 23333333211 13699999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC-CCeEEEEccCchhhhh--cCEEEEEeCCEEEEecChhHHh
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV-GRTCVVVAHRLSTIQK--ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~-~~TvI~IaHrl~ti~~--aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
|||++++|+||||||||++||+++.+.+.+.|+++.+ ++|+|+|||+++.+.. ||+|++|++|++++.|++++..
T Consensus 157 aral~~~p~illLDEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~ 234 (248)
T PRK09580 157 LQMAVLEPELCILDESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRILDYIKPDYVHVLYQGRIVKSGDFTLVK 234 (248)
T ss_pred HHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHhhhCCEEEEEECCeEEEeCCHHHHH
Confidence 9999999999999999999999999999999988754 7899999999999876 8999999999999999998653
No 363
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-38 Score=358.16 Aligned_cols=210 Identities=25% Similarity=0.410 Sum_probs=173.3
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++||+++|++ +.++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++.. ...++.+
T Consensus 6 ~l~~~~l~~~~~~--~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~---~~~~~~i 80 (272)
T PRK15056 6 GIVVNDVTVTWRN--GHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVRLASGKISILGQPTRQ---ALQKNLV 80 (272)
T ss_pred eEEEEeEEEEecC--CcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEhHH---hhccceE
Confidence 4899999999962 3469999999999999999999999999999999999999999999999998742 1223469
Q ss_pred EEEecCCCC---CcccHHHHHccCCC---------CC-CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHH
Q 047171 1057 ALVSQEPTL---FAGTIRQNIVYGKE---------VA-TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQ 1123 (1224)
Q Consensus 1057 ~~V~Qdp~L---F~gTIreNl~~~~~---------~~-~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQ 1123 (1224)
+|+||+|.+ +..++++|+.++.. .. .++.+.++++..++.++. + ....+|||||||
T Consensus 81 ~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~-------~----~~~~~LSgG~~q 149 (272)
T PRK15056 81 AYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFR-------H----RQIGELSGGQKK 149 (272)
T ss_pred EEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHh-------c----CCcccCCHHHHH
Confidence 999999865 45689999875311 00 122344555555554332 2 344579999999
Q ss_pred HHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHH
Q 047171 1124 RIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSL 1201 (1224)
Q Consensus 1124 RlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eL 1201 (1224)
|++|||||+++|+||||||||++||+.+.+.+.+.|+++. +++|||+|||+++.+.. ||+++++ +|++++.|+++++
T Consensus 150 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~~~~~~~d~v~~~-~G~i~~~g~~~~~ 228 (272)
T PRK15056 150 RVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLGSVTEFCDYTVMV-KGTVLASGPTETT 228 (272)
T ss_pred HHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEE-CCEEEeecCHHhc
Confidence 9999999999999999999999999999999999999875 47899999999998865 9999766 8999999999998
Q ss_pred hh
Q 047171 1202 LS 1203 (1224)
Q Consensus 1202 l~ 1203 (1224)
..
T Consensus 229 ~~ 230 (272)
T PRK15056 229 FT 230 (272)
T ss_pred cC
Confidence 64
No 364
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=1.1e-38 Score=368.22 Aligned_cols=207 Identities=27% Similarity=0.461 Sum_probs=174.8
Q ss_pred ccEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC--cEEEECCEecCCCCHHHHhccc
Q 047171 326 GEIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVK--GNILLDGHKIKKLQLKWLRSQM 393 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~--G~i~~~g~~~~~~~~~~~r~~i 393 (1224)
+.|+++||+++|++. +++++++|+||||||||||+++|+|+++|++ |+|.++|+++.+.+. .++.|
T Consensus 4 ~~l~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~~~~G~i~~~g~~~~~~~~--~~r~i 81 (362)
T TIGR03258 4 GGIRIDHLRVAYGANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAAGLTGRIAIADRDLTHAPP--HKRGL 81 (362)
T ss_pred eEEEEEEEEEEECCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCEEEEECCEECCCCCH--HHCCE
Confidence 467788888887642 3567999999999999999999999999999 999999999987665 35689
Q ss_pred EEecCCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 394 GLVNQEPILFST-SIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 394 ~~v~Q~~~lf~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
|||+|++.+|+. ||+|||.|+.. ..+.++..+ .+.+.++.+ |++........+|||||||||||||||+.
T Consensus 82 g~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~-----~v~~~l~~~--gL~~~~~~~~~~LSgGq~QRvaLARAL~~ 154 (362)
T TIGR03258 82 ALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAE-----RVADALKLV--GLGDAAAHLPAQLSGGMQQRIAIARAIAI 154 (362)
T ss_pred EEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHhc--CCCchhhCChhhCCHHHHHHHHHHHHHhc
Confidence 999999999976 99999998742 122222221 233445555 66666778889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC---CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQASQ---GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~---~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|++||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++++.. ||+|++|++|++++.|+++++...
T Consensus 155 ~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~ea~~l~dri~vl~~G~i~~~g~~~~~~~~ 229 (362)
T TIGR03258 155 EPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQDDALTLADKAGIMKDGRLAAHGEPQALYDA 229 (362)
T ss_pred CCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999999987643 7899999999999865 999999999999999999999875
No 365
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=1.5e-38 Score=340.55 Aligned_cols=185 Identities=29% Similarity=0.481 Sum_probs=163.6
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcc--cCCCCceEEECCccCCCCCHHHH-hc
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERF--YDPQSGSVMVDERNIKSYNLRKL-RS 1054 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl--~~p~~G~I~idG~di~~~~~~~l-R~ 1054 (1224)
++++|++++|++ .++|+|+||++++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++.+.+.... |.
T Consensus 1 l~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~ 77 (200)
T cd03217 1 LEIKDLHVSVGG---KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARL 77 (200)
T ss_pred CeEEEEEEEeCC---EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhC
Confidence 478999999963 4699999999999999999999999999999999999 58999999999999998876654 56
Q ss_pred ceEEEecCCCCCcc-cHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1055 CIALVSQEPTLFAG-TIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1055 ~i~~V~Qdp~LF~g-TIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
+++|+||+|.+|.+ |+++|+ .. ...+||||||||++||||+++
T Consensus 78 ~i~~v~q~~~~~~~~~~~~~l-------------------------~~-----------~~~~LS~G~~qrv~laral~~ 121 (200)
T cd03217 78 GIFLAFQYPPEIPGVKNADFL-------------------------RY-----------VNEGFSGGEKKRNEILQLLLL 121 (200)
T ss_pred cEEEeecChhhccCccHHHHH-------------------------hh-----------ccccCCHHHHHHHHHHHHHhc
Confidence 79999999998875 555554 00 113699999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh--hcCEEEEEeCCEEEEecChhHHh
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQ--KADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~--~aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
+|+||||||||++||+.+...+.+.|++.. +++|+|++||+++.+. .||+|++|++|++++.| +.|+.
T Consensus 122 ~p~illlDEPt~~LD~~~~~~l~~~L~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~G~i~~~~-~~~~~ 192 (200)
T cd03217 122 EPDLAILDEPDSGLDIDALRLVAEVINKLREEGKSVLIITHYQRLLDYIKPDRVHVLYDGRIVKSG-DKELA 192 (200)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHHHHHHhhCCEEEEEECCEEEEEc-cHHHH
Confidence 999999999999999999999999999875 4789999999999987 59999999999999999 55554
No 366
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=6.9e-39 Score=338.90 Aligned_cols=206 Identities=31% Similarity=0.521 Sum_probs=174.4
Q ss_pred cEEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHh----cccEEecCCCCC
Q 047171 327 EIEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLR----SQMGLVNQEPIL 402 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r----~~i~~v~Q~~~l 402 (1224)
.+-++|+||.-+ .+++..|.|-||||||||++++.|+++|++|+|+++|.|+..++.+.|| +++++|+|+.-|
T Consensus 41 vvGv~~~sl~v~---~GeIfViMGLSGSGKSTLvR~~NrLiept~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaL 117 (386)
T COG4175 41 VVGVNDASLDVE---EGEIFVIMGLSGSGKSTLVRLLNRLIEPTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFAL 117 (386)
T ss_pred EEeeccceeeec---CCeEEEEEecCCCCHHHHHHHHhccCCCCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcc
Confidence 467888888764 5779999999999999999999999999999999999999999987764 579999999999
Q ss_pred Ccc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 047171 403 FST-SIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDE 479 (1224)
Q Consensus 403 f~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE 479 (1224)
|+. ||.||..||.+ ....+| +...+.++++.. |++-+-...+.+||||+||||.|||||..||+||++||
T Consensus 118 lPhrtVl~Nv~fGLev~Gv~~~e-----r~~~a~~~l~~V--gL~~~~~~yp~eLSGGMqQRVGLARAla~~~~IlLMDE 190 (386)
T COG4175 118 LPHRTVLENVAFGLEVQGVPKAE-----REERALEALELV--GLEGYADKYPNELSGGMQQRVGLARALANDPDILLMDE 190 (386)
T ss_pred ccchhHhhhhhcceeecCCCHHH-----HHHHHHHHHHHc--CchhhhhcCcccccchHHHHHHHHHHHccCCCEEEecC
Confidence 865 99999999975 222221 112223344443 55555566778999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhhc
Q 047171 480 ATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQMN 542 (1224)
Q Consensus 480 ~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~~ 542 (1224)
|+|||||--...+|+.|.++. -+||+|+|||++++.-+ .|||..|++|+|+..||++|++.++
T Consensus 191 aFSALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLdEAlriG~rIaimkdG~ivQ~Gtp~eIl~~P 256 (386)
T COG4175 191 AFSALDPLIRTEMQDELLELQAKLKKTIVFITHDLDEALRIGDRIAIMKDGEIVQVGTPEEILLNP 256 (386)
T ss_pred chhhcChHHHHHHHHHHHHHHHHhCCeEEEEecCHHHHHhccceEEEecCCeEEEeCCHHHHHcCc
Confidence 999999999999999887654 37999999999999755 9999999999999999999999875
No 367
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4e-38 Score=347.82 Aligned_cols=200 Identities=34% Similarity=0.554 Sum_probs=167.9
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHH
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKE 409 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ 409 (1224)
++|++|.. +++++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+|+.++|++|++.+|+.|++|
T Consensus 19 l~~vsl~i---~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~tv~e 95 (241)
T PRK14250 19 LKDISVKF---EGGAIYTIVGPSGAGKSTLIKLINRLIDPTEGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFEGTVKD 95 (241)
T ss_pred eeeeeEEE---cCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcChHHhhhcEEEEecCchhchhhHHH
Confidence 44444443 256799999999999999999999999999999999999998877778888999999999999999999
Q ss_pred HHhcCCCCCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHH
Q 047171 410 NILIGKPGASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAES 488 (1224)
Q Consensus 410 ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~ 488 (1224)
|+.++......+ ...+.+.++.+ |++ ......+.+||||||||++||||++.+|++|||||||++||+++
T Consensus 96 ~l~~~~~~~~~~-------~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~ 166 (241)
T PRK14250 96 NIEYGPMLKGEK-------NVDVEYYLSIV--GLNKEYATRDVKNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTS 166 (241)
T ss_pred HHhcchhhcCcH-------HHHHHHHHHHc--CCCHHHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 998764211111 01223444444 443 24566788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 489 ERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 489 ~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 167 ~~~l~~~l~~~~~~~g~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (241)
T PRK14250 167 TEIIEELIVKLKNKMNLTVIWITHNMEQAKRIGDYTAFLNKGILVEYAKTYDFFTN 222 (241)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEeccHHHHHHhCCEEEEEeCCEEEEeCCHHHHhcC
Confidence 999999998864 38999999999999876 999999999999999999998754
No 368
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=2.1e-38 Score=365.47 Aligned_cols=200 Identities=29% Similarity=0.486 Sum_probs=167.2
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cHH
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SIK 408 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti~ 408 (1224)
++|++|.. .++++++|+||||||||||+++|+|+++|++|+|++||+++...+. .+++||||+|++.+|+. |++
T Consensus 18 l~~isl~i---~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~i~~v~Q~~~l~p~~tv~ 92 (353)
T PRK10851 18 LNDISLDI---PSGQMVALLGPSGSGKTTLLRIIAGLEHQTSGHIRFHGTDVSRLHA--RDRKVGFVFQHYALFRHMTVF 92 (353)
T ss_pred EEEeEEEE---cCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCH--HHCCEEEEecCcccCCCCcHH
Confidence 44555544 2577999999999999999999999999999999999999977654 35689999999999975 999
Q ss_pred HHHhcCCCC------CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 047171 409 ENILIGKPG------ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATS 482 (1224)
Q Consensus 409 ~ni~~g~~~------~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts 482 (1224)
||+.|+... .+.++..+ .+.+.++.+ |++.....++.+||||||||++|||||+.+|++||||||||
T Consensus 93 eni~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgGq~QRvalArAL~~~P~llLLDEP~s 165 (353)
T PRK10851 93 DNIAFGLTVLPRRERPNAAAIKA-----KVTQLLEMV--QLAHLADRYPAQLSGGQKQRVALARALAVEPQILLLDEPFG 165 (353)
T ss_pred HHHHhhhhhcccccCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCc
Confidence 999987431 12222211 223444544 55555677889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 483 ALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 483 ~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+||+.+...+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 166 ~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~~ea~~~~Dri~vl~~G~i~~~g~~~~i~~~ 227 (353)
T PRK10851 166 ALDAQVRKELRRWLRQLHEELKFTSVFVTHDQEEAMEVADRVVVMSQGNIEQAGTPDQVWRE 227 (353)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999988653 7899999999999876 999999999999999999999875
No 369
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-38 Score=350.62 Aligned_cols=206 Identities=36% Similarity=0.566 Sum_probs=169.2
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCC---HHHHhcccEEecCCCCCCc-
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQ---LKWLRSQMGLVNQEPILFS- 404 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~---~~~~r~~i~~v~Q~~~lf~- 404 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+++.++||+|++.+|.
T Consensus 16 ~l~~vs~~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T cd03256 16 ALKDVSLSIN---PGEFVALIGPSGAGKSTLLRCLNGLVEPTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIER 92 (241)
T ss_pred EEecceEEEc---CCCEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEeccccCHhHHHHHHhccEEEcccCccccc
Confidence 5667777653 57799999999999999999999999999999999999998776 4567889999999998886
Q ss_pred ccHHHHHhcCCCCCC--HHHH---HHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 047171 405 TSIKENILIGKPGAS--METV---VKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDE 479 (1224)
Q Consensus 405 ~ti~~ni~~g~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE 479 (1224)
.|++||+.++..... ...+ ........+.+.++.+ |++......+.+||||||||++|||||+.+|++|||||
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDE 170 (241)
T cd03256 93 LSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERV--GLLDKAYQRADQLSGGQQQRVAIARALMQQPKLILADE 170 (241)
T ss_pred CcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHc--CChhhhCCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 599999987642110 0000 0001112234455555 56656777889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHH
Q 047171 480 ATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLM 539 (1224)
Q Consensus 480 ~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 539 (1224)
||++||+.+...+.+.|+++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 171 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 233 (241)
T cd03256 171 PVASLDPASSRQVMDLLKRINREEGITVIVSLHQVDLAREYADRIVGLKDGRIVFDGPPAELT 233 (241)
T ss_pred ccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCHHHhh
Confidence 999999999999999998864 38999999999999985 9999999999999999998863
No 370
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=2.6e-37 Score=388.35 Aligned_cols=103 Identities=27% Similarity=0.474 Sum_probs=91.4
Q ss_pred HHHhcccccccc-ccCCCCCCChHHHHHHHHHHHhccCC--CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeC
Q 047171 435 FIMKLNDGYETK-VGQFGVQLSGGQKQRIAIARALIRDP--KILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAH 510 (1224)
Q Consensus 435 ~i~~l~~g~~t~-~~~~g~~LSgGq~qriaiARal~~~~--~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H 510 (1224)
++..+ |++.. .++...+|||||+|||+|||||..+| ++|||||||++||++....+.+.|+++. +|.|+|+|+|
T Consensus 470 ~L~~v--gL~~l~l~r~~~tLSGGE~QRv~LA~aL~~~~~~~llILDEPtagLD~~~~~~L~~~L~~L~~~G~TVIvVeH 547 (924)
T TIGR00630 470 FLIDV--GLDYLTLSRAAGTLSGGEAQRIRLATQIGSGLTGVLYVLDEPSIGLHQRDNERLINTLKRLRDLGNTVIVVEH 547 (924)
T ss_pred hHhhc--cccccccCCCcCcCCHHHHHHHHHHHHHhhCCCCcEEEEcCCccCCCHHHHHHHHHHHHHHHhCCCEEEEEEC
Confidence 44555 55543 67888999999999999999999986 8999999999999999999999998874 5899999999
Q ss_pred CcchhhccCEEEEE------eCceEEeecChHHHH
Q 047171 511 RLSTIRKADLIGVL------QSGRVIESGSHDVLM 539 (1224)
Q Consensus 511 ~l~~~~~ad~i~vl------~~G~i~~~g~~~~l~ 539 (1224)
+++.+..||+|++| ++|+|+++|+.+++.
T Consensus 548 d~~~i~~aD~vi~LgpgaG~~~G~Iv~~g~~~el~ 582 (924)
T TIGR00630 548 DEETIRAADYVIDIGPGAGIHGGEVVASGTPEEIL 582 (924)
T ss_pred CHHHHhhCCEEEEecccccCCCCEEeeccCHHHHh
Confidence 99999999999999 899999999888764
No 371
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-38 Score=366.14 Aligned_cols=203 Identities=34% Similarity=0.603 Sum_probs=170.6
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH---HhcccEEecCCCCCCc-
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW---LRSQMGLVNQEPILFS- 404 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r~~i~~v~Q~~~lf~- 404 (1224)
.++|+||.. ++++++||+||||||||||+++|+|+++|++|+|.++|+++..++... +|++||||+|++.+|+
T Consensus 20 il~~vsl~i---~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~~~ 96 (343)
T PRK11153 20 ALNNVSLHI---PAGEIFGVIGASGAGKSTLIRCINLLERPTSGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLLSS 96 (343)
T ss_pred EEEeeEEEE---cCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccCCC
Confidence 345555554 256799999999999999999999999999999999999998877544 4788999999999886
Q ss_pred ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 047171 405 TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATS 482 (1224)
Q Consensus 405 ~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts 482 (1224)
.|++||+.++.. ..+.++.. ..+.+.++.+ |++......+.+||||||||++|||||+.+|++|||||||+
T Consensus 97 ~tv~eni~~~~~~~~~~~~~~~-----~~~~~~l~~~--gL~~~~~~~~~~LSgGq~qRv~lAraL~~~p~iLlLDEPts 169 (343)
T PRK11153 97 RTVFDNVALPLELAGTPKAEIK-----ARVTELLELV--GLSDKADRYPAQLSGGQKQRVAIARALASNPKVLLCDEATS 169 (343)
T ss_pred CcHHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHHcCCCEEEEeCCcc
Confidence 599999988632 12222221 1234455555 66666777889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 483 ALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 483 ~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+||+.+...+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 170 ~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~~i~~~~d~v~~l~~G~i~~~g~~~~~~~~ 231 (343)
T PRK11153 170 ALDPATTRSILELLKDINRELGLTIVLITHEMDVVKRICDRVAVIDAGRLVEQGTVSEVFSH 231 (343)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 999999999999998864 38999999999999876 999999999999999999999764
No 372
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=2.9e-38 Score=352.09 Aligned_cols=212 Identities=25% Similarity=0.388 Sum_probs=175.4
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcc--cCCCCceEEECCccCCCCCHHHHhc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERF--YDPQSGSVMVDERNIKSYNLRKLRS 1054 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl--~~p~~G~I~idG~di~~~~~~~lR~ 1054 (1224)
.|+++||+++|++ .++|+|+||+|++||++||+|+||||||||+++|.|+ ++|++|+|.+||.++...+....++
T Consensus 7 ~l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 83 (252)
T CHL00131 7 ILEIKNLHASVNE---NEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESILDLEPEERAH 83 (252)
T ss_pred eEEEEeEEEEeCC---EEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEcccCChhhhhe
Confidence 4999999999963 3599999999999999999999999999999999998 6899999999999998888766654
Q ss_pred -ceEEEecCCCCCcc-cHHHHHccCCCC---------CCH----HHHHHHHHHHhHHHHHHhcccccccccCCCCC-CCC
Q 047171 1055 -CIALVSQEPTLFAG-TIRQNIVYGKEV---------ATE----AEIRKAAVLANAHEFISSTEDGYDTYCGERGV-QLS 1118 (1224)
Q Consensus 1055 -~i~~V~Qdp~LF~g-TIreNl~~~~~~---------~~d----eei~~al~~a~l~~~I~~lp~gldt~vge~G~-~LS 1118 (1224)
.++++||++.+|.+ |+.+|+.++... .+. +.+.++++..++. ++....... .||
T Consensus 84 ~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~----------~~~~~~~~~~~LS 153 (252)
T CHL00131 84 LGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMD----------PSFLSRNVNEGFS 153 (252)
T ss_pred eeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCc----------hhhhccccccCCC
Confidence 58999999998875 799998754210 011 1122233322221 122333333 599
Q ss_pred hHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh--cCEEEEEeCCEEEEe
Q 047171 1119 GGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK--ADNIVVIKNGKVVEQ 1195 (1224)
Q Consensus 1119 GGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~--aD~I~vl~~G~Ive~ 1195 (1224)
||||||++||||++++|+||||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.
T Consensus 154 gG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~~~~~~~d~i~~l~~G~i~~~ 233 (252)
T CHL00131 154 GGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRLLDYIKPDYVHVMQNGKIIKT 233 (252)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHhhhCCEEEEEeCCEEEEe
Confidence 999999999999999999999999999999999999999998875 47999999999999875 899999999999999
Q ss_pred cChhHH
Q 047171 1196 GTQSSL 1201 (1224)
Q Consensus 1196 Gt~~eL 1201 (1224)
|+++++
T Consensus 234 ~~~~~~ 239 (252)
T CHL00131 234 GDAELA 239 (252)
T ss_pred cChhhh
Confidence 999844
No 373
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.3e-38 Score=348.54 Aligned_cols=203 Identities=35% Similarity=0.599 Sum_probs=169.6
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHH---HHhcccEEecCCCCCCc
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLK---WLRSQMGLVNQEPILFS 404 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~~i~~v~Q~~~lf~ 404 (1224)
..++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..++.++|++|++.+|.
T Consensus 19 ~il~~~s~~i~---~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVP---KGEIFGIIGRSGAGKSTLIRCINGLERPTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEc---CCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 34666666653 5679999999999999999999999999999999999999876543 34778999999999997
Q ss_pred -ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 047171 405 -TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEAT 481 (1224)
Q Consensus 405 -~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~t 481 (1224)
.|++||+.++.. ..+..+. ...+++.++.+ |++........+||||||||++||||++.+|++|||||||
T Consensus 96 ~~t~~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~ 168 (233)
T cd03258 96 SRTVFENVALPLEIAGVPKAEI-----EERVLELLELV--GLEDKADAYPAQLSGGQKQRVGIARALANNPKVLLCDEAT 168 (233)
T ss_pred CCcHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHC--CChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCC
Confidence 599999987532 1111111 12234556666 6666677788999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 482 SALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 482 s~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
++||+.+...+.+.+.++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 169 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (233)
T cd03258 169 SALDPETTQSILALLRDINRELGLTIVLITHEMEVVKRICDRVAVMEKGEVVEEGTVEEVFA 230 (233)
T ss_pred CcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhc
Confidence 9999999999999998864 38999999999999876 99999999999999999988764
No 374
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-38 Score=354.90 Aligned_cols=202 Identities=32% Similarity=0.534 Sum_probs=167.6
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCC--HHHHhcccEEecCCC--CCCc
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQ--LKWLRSQMGLVNQEP--ILFS 404 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--~~~~r~~i~~v~Q~~--~lf~ 404 (1224)
.++||+|... +|+++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...++++||||+|+| .+|+
T Consensus 22 ~l~~vs~~i~---~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 98 (287)
T PRK13637 22 ALDNVNIEIE---DGEFVGLIGHTGSGKSTLIQHLNGLLKPTSGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQLFE 98 (287)
T ss_pred eeeeeEEEEc---CCCEEEEECCCCCcHHHHHHHHhcCCCCCccEEEECCEECCCcCccHHHHhhceEEEecCchhcccc
Confidence 4555555442 56799999999999999999999999999999999999997754 356788999999998 5788
Q ss_pred ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhcccccc--ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCC
Q 047171 405 TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYE--TKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEA 480 (1224)
Q Consensus 405 ~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~--t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ 480 (1224)
.|++|||.++.. ..+.++..+. +.+.++.+ |++ +.....+.+||||||||++|||||+.+|++||||||
T Consensus 99 ~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~~~LSgGq~qrv~iAraL~~~P~llllDEP 171 (287)
T PRK13637 99 ETIEKDIAFGPINLGLSEEEIENR-----VKRAMNIV--GLDYEDYKDKSPFELSGGQKRRVAIAGVVAMEPKILILDEP 171 (287)
T ss_pred ccHHHHHHhHHHHCCCCHHHHHHH-----HHHHHHHc--CCCchhhccCCcccCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 999999998642 2233333222 22334444 443 456778899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhh-ccCEEEEEeCceEEeecChHHHHh
Q 047171 481 TSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIR-KADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 481 ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~-~ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
|++||+.+...+.+.++++. .|+|+|+|||+++.+. .||+|++|++|++++.|+.+++.+
T Consensus 172 t~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13637 172 TAGLDPKGRDEILNKIKELHKEYNMTIILVSHSMEDVAKLADRIIVMNKGKCELQGTPREVFK 234 (287)
T ss_pred ccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHHh
Confidence 99999999999999998864 3899999999999986 499999999999999999998865
No 375
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.6e-39 Score=320.18 Aligned_cols=222 Identities=25% Similarity=0.472 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH-Hhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK-LRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~ 1055 (1224)
.+..+|+..+|.. ++|+++|||+|++||.||+.|||||||||.+.++.|+.+|++|+|.+||.||+.++.+. -|-.
T Consensus 4 ~L~a~~l~K~y~k---r~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d~G~i~ld~~diT~lPm~~RArlG 80 (243)
T COG1137 4 TLVAENLAKSYKK---RKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPDSGKILLDDEDITKLPMHKRARLG 80 (243)
T ss_pred EEEehhhhHhhCC---eeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecCCceEEECCcccccCChHHHhhcC
Confidence 5788999999964 46999999999999999999999999999999999999999999999999999999887 4888
Q ss_pred eEEEecCCCCCcc-cHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccC
Q 047171 1056 IALVSQEPTLFAG-TIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKN 1134 (1224)
Q Consensus 1056 i~~V~Qdp~LF~g-TIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~ 1134 (1224)
|||+||||.+|.+ ||+|||....+. .+.+.+.+-++..+++.++.+ .+...-...|.+||||||.|+-|||||..+
T Consensus 81 igYLpQE~SIFr~LtV~dNi~~vlE~-~~~d~~~~~~~~~l~~LL~ef--~i~hlr~~~a~sLSGGERRR~EIARaLa~~ 157 (243)
T COG1137 81 IGYLPQEASIFRKLTVEDNIMAVLEI-REKDLKKAERKEELDALLEEF--HITHLRDSKAYSLSGGERRRVEIARALAAN 157 (243)
T ss_pred cccccccchHhhcCcHHHHHHHHHhh-hhcchhHHHHHHHHHHHHHHh--chHHHhcCcccccccchHHHHHHHHHHhcC
Confidence 9999999999975 999999754321 111112222222233333322 344444567889999999999999999999
Q ss_pred CCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCch-hhhhcCEEEEEeCCEEEEecChhHHhhc
Q 047171 1135 PMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLS-TIQKADNIVVIKNGKVVEQGTQSSLLSM 1204 (1224)
Q Consensus 1135 p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~-ti~~aD~I~vl~~G~Ive~Gt~~eLl~~ 1204 (1224)
|+.+|||||.+++||-+-..|++.+..+. +|--|++.-|... |+.-|||.+++.+|+|...|+|+|++++
T Consensus 158 P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVREtL~i~dRaYIi~~G~vla~G~p~ei~~n 229 (243)
T COG1137 158 PKFILLDEPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVRETLDICDRAYIISDGKVLAEGSPEEIVNN 229 (243)
T ss_pred CCEEEecCCccCCCchhHHHHHHHHHHHHhCCceEEEccccHHHHHhhhheEEEEecCeEEecCCHHHHhcC
Confidence 99999999999999999999999998876 4556666669865 6777999999999999999999999985
No 376
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=2.7e-38 Score=366.08 Aligned_cols=206 Identities=31% Similarity=0.484 Sum_probs=171.9
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
.++++|++++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|.++...++. ++.||||
T Consensus 14 ~L~l~~l~~~~~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~~G~I~~~g~~i~~~~~~--~r~ig~v 91 (375)
T PRK09452 14 LVELRGISKSFDGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPDSGRIMLDGQDITHVPAE--NRHVNTV 91 (375)
T ss_pred eEEEEEEEEEECCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHH--HCCEEEE
Confidence 47788888888642 25679999999999999999999999999999999999999877654 4689999
Q ss_pred cCCCCCCcc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 047171 397 NQEPILFST-SIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPK 473 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ 473 (1224)
+|++.+|+. ||+|||.|+... .+.++..+ .+.+.++.+ |++......+.+|||||||||||||||+.+|+
T Consensus 92 fQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~p~~LSgGq~QRVaLARaL~~~P~ 164 (375)
T PRK09452 92 FQSYALFPHMTVFENVAFGLRMQKTPAAEITP-----RVMEALRMV--QLEEFAQRKPHQLSGGQQQRVAIARAVVNKPK 164 (375)
T ss_pred ecCcccCCCCCHHHHHHHHHhhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 999999966 999999997531 12222111 122333333 45555666778999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 474 ILLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 474 ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+||||||||+||+.+...+.+.|+++.+ |.|+|+|||+++++.. ||+|++|++|+|++.|++++++..
T Consensus 165 llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~i~~~ 235 (375)
T PRK09452 165 VLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRDGRIEQDGTPREIYEE 235 (375)
T ss_pred EEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 9999999999999999999999988643 8999999999999765 999999999999999999999875
No 377
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-38 Score=329.94 Aligned_cols=218 Identities=30% Similarity=0.513 Sum_probs=188.3
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHH-hcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKL-RSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~l-R~~ 1055 (1224)
-++.++++.+|. ...+++||||++++||.+||+|||||||||+++++.|+|+|++|+|.++|.||..++++.. |..
T Consensus 4 lL~v~~l~k~FG---Gl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~~G~v~~~G~~it~l~p~~iar~G 80 (250)
T COG0411 4 LLEVRGLSKRFG---GLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPSSGTVIFRGRDITGLPPHRIARLG 80 (250)
T ss_pred eeeeccceeecC---CEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCCCceEEECCcccCCCCHHHHHhcc
Confidence 367899999995 4569999999999999999999999999999999999999999999999999999998885 778
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCCC------------C--CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKEV------------A--TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGG 1120 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~~------------~--~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGG 1120 (1224)
|+--+|.+.+|+ .|+.||+..+... . .+++..+.+ -.+.+++ |++..-.+...+||+|
T Consensus 81 i~RTFQ~~rlF~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A--~~~Le~v-----gL~~~a~~~A~~LsyG 153 (250)
T COG0411 81 IARTFQITRLFPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERA--RELLEFV-----GLGELADRPAGNLSYG 153 (250)
T ss_pred ceeecccccccCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHH--HHHHHHc-----CCchhhcchhhcCChh
Confidence 999999999997 5999999876321 1 222222211 1223333 6666667777889999
Q ss_pred HHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecC
Q 047171 1121 QKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGT 1197 (1224)
Q Consensus 1121 QrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt 1197 (1224)
|+.||-|||||..+|++|+||||.++|.++-...+.+.|++..+ |.|+++|-||++.+.+ ||||+||+.|+++.+|+
T Consensus 154 ~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~Vm~l~dri~Vl~~G~~IAeG~ 233 (250)
T COG0411 154 QQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKLVMGLADRIVVLNYGEVIAEGT 233 (250)
T ss_pred HhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHHHhhhccEEEeccCCcCcccCC
Confidence 99999999999999999999999999999999999999999874 4899999999999877 99999999999999999
Q ss_pred hhHHhhc
Q 047171 1198 QSSLLSM 1204 (1224)
Q Consensus 1198 ~~eLl~~ 1204 (1224)
|+|..++
T Consensus 234 P~eV~~d 240 (250)
T COG0411 234 PEEVRNN 240 (250)
T ss_pred HHHHhcC
Confidence 9999875
No 378
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=1.2e-38 Score=344.06 Aligned_cols=194 Identities=30% Similarity=0.473 Sum_probs=162.6
Q ss_pred EEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH----HHHhcc
Q 047171 980 LKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL----RKLRSC 1055 (1224)
Q Consensus 980 ~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~----~~lR~~ 1055 (1224)
++||++.|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++..++. ..+|++
T Consensus 1 i~~l~~~~~~---~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 77 (206)
T TIGR03608 1 LKNISKKFGD---KIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEKFDSGQVYLNGKETPPLNSKKASKFRREK 77 (206)
T ss_pred CcceEEEECC---EEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccchhhHHHHHHhC
Confidence 4789999963 469999999999999999999999999999999999999999999999999765442 246789
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCCC--CC----HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKEV--AT----EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~~--~~----deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
++|++|++.+|. .|++||+.++... .. ++++.++++..++.+ .......+||||||||++||
T Consensus 78 i~~~~q~~~~~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-----------~~~~~~~~lS~G~~qr~~la 146 (206)
T TIGR03608 78 LGYLFQNFALIENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNL-----------KLKQKIYELSGGEQQRVALA 146 (206)
T ss_pred eeEEecchhhccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchh-----------hhcCChhhCCHHHHHHHHHH
Confidence 999999999987 6999999874211 11 233444444444432 33344567999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEEE
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQKADNIVVI 1187 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~aD~I~vl 1187 (1224)
|||+++|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+..||+|++|
T Consensus 147 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~d~i~~l 206 (206)
T TIGR03608 147 RAILKDPPLILADEPTGSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPEVAKQADRVIEL 206 (206)
T ss_pred HHHHcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEeC
Confidence 99999999999999999999999999999999875 478999999999988789999875
No 379
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=2.9e-38 Score=345.37 Aligned_cols=202 Identities=28% Similarity=0.453 Sum_probs=166.5
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHH-hcccEEecCCCCCCcc-c
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWL-RSQMGLVNQEPILFST-S 406 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i~~v~Q~~~lf~~-t 406 (1224)
.++|++|... +++++||+||||||||||+++|+|+++|++|+|.++|.++...+.... +++++|++|++.+|+. |
T Consensus 15 ~l~~vs~~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (222)
T cd03224 15 ILFGVSLTVP---EGEIVALLGRNGAGKTTLLKTIMGLLPPRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPELT 91 (222)
T ss_pred EeeeeeEEEc---CCeEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCCc
Confidence 4667777653 577999999999999999999999999999999999999988776554 6789999999999886 9
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 047171 407 IKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDA 486 (1224)
Q Consensus 407 i~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~ 486 (1224)
++||+.++.......+.. ..+.+.++.++ +++......+.+||||||||++|||||+.+|++|||||||++||+
T Consensus 92 ~~~~l~~~~~~~~~~~~~-----~~~~~~l~~~~-~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~ 165 (222)
T cd03224 92 VEENLLLGAYARRRAKRK-----ARLERVYELFP-RLKERRKQLAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAP 165 (222)
T ss_pred HHHHHHHHhhhcCchhHH-----HHHHHHHHHHH-hhhhhhhCchhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCH
Confidence 999998864322111111 11223333332 234445677889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHH
Q 047171 487 ESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLM 539 (1224)
Q Consensus 487 ~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 539 (1224)
++...+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+.+++.
T Consensus 166 ~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 220 (222)
T cd03224 166 KIVEEIFEAIRELRDEGVTILLVEQNARFALEIADRAYVLERGRVVLEGTAAELL 220 (222)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhccEEEEeeCCeEEEeCCHHHHh
Confidence 99999999998765 58999999999999866 9999999999999999988765
No 380
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4e-38 Score=354.61 Aligned_cols=193 Identities=28% Similarity=0.460 Sum_probs=164.1
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCC--CCcccHHHHHhcCCCC--
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPI--LFSTSIKENILIGKPG-- 417 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~--lf~~ti~~ni~~g~~~-- 417 (1224)
+++++||+|+||||||||+++|+|+++|++|+|.++|.++...+...+|+++|||+|+|. ++..||+|||.++...
T Consensus 32 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~ 111 (279)
T PRK13650 32 QGEWLSIIGHNGSGKSTTVRLIDGLLEAESGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKG 111 (279)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCC
Confidence 567999999999999999999999999999999999999988788888899999999983 5567999999987432
Q ss_pred CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHH
Q 047171 418 ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALD 497 (1224)
Q Consensus 418 ~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~ 497 (1224)
.+.++..+. +.+.++.+ |++........+||||||||++|||||+.+|++|||||||++||+.+.+.+.+.+.
T Consensus 112 ~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~ 184 (279)
T PRK13650 112 IPHEEMKER-----VNEALELV--GMQDFKEREPARLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIK 184 (279)
T ss_pred CCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHH
Confidence 222222111 22334444 45555667778999999999999999999999999999999999999999999998
Q ss_pred HHc--CCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 498 QAS--QGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 498 ~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
++. .|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 185 ~l~~~~g~tilivtH~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13650 185 GIRDDYQMTVISITHDLDEVALSDRVLVMKNGQVESTSTPRELFSR 230 (279)
T ss_pred HHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 874 38999999999999978999999999999999999888654
No 381
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-38 Score=349.21 Aligned_cols=201 Identities=30% Similarity=0.500 Sum_probs=165.6
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCc-ccH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFS-TSI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~-~ti 407 (1224)
.++||+|+. +++++++|+||||||||||+++|+|+++|++|+|.++|.++...+. .+++++||+|+|.+|. .|+
T Consensus 17 il~~vs~~i---~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 17 ALDDVSLDI---PSGELVALLGPSGSGKTTLLRLIAGLERPDSGTILFGGEDATDVPV--QERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred eeeeeeEEE---cCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCc--cccceEEEecCCcccCCCCH
Confidence 345555544 2567999999999999999999999999999999999999876543 2568999999999886 599
Q ss_pred HHHHhcCCCCC------CHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 047171 408 KENILIGKPGA------SMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEAT 481 (1224)
Q Consensus 408 ~~ni~~g~~~~------~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~t 481 (1224)
+||+.++.... ..++. ...+.+.++.+ |++........+||||||||++|||||+.+|++|||||||
T Consensus 92 ~e~l~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEP~ 164 (239)
T cd03296 92 FDNVAFGLRVKPRSERPPEAEI-----RAKVHELLKLV--QLDWLADRYPAQLSGGQRQRVALARALAVEPKVLLLDEPF 164 (239)
T ss_pred HHHHhhhhhhccccccCCHHHH-----HHHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 99999864211 11111 11234455555 5665667778899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 482 SALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 482 s~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
++||+++.+.+.+.|.++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 165 ~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 227 (239)
T cd03296 165 GALDAKVRKELRRWLRRLHDELHVTTVFVTHDQEEALEVADRVVVMNKGRIEQVGTPDEVYDH 227 (239)
T ss_pred ccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHHhcC
Confidence 9999999999999998864 37899999999998865 999999999999999999998653
No 382
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=4.2e-38 Score=349.00 Aligned_cols=206 Identities=32% Similarity=0.526 Sum_probs=167.1
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCH---HHHhcccEEecCCCCCCc-
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQL---KWLRSQMGLVNQEPILFS- 404 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~~i~~v~Q~~~lf~- 404 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+. ..+|++++||+|++.+|+
T Consensus 17 il~~vs~~i~---~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (243)
T TIGR02315 17 ALKNINLNIN---PGEFVAIIGPSGAGKSTLLRCINRLVEPSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIER 93 (243)
T ss_pred eeecceEEEc---CCCEEEEECCCCCCHHHHHHHHhCCcCCCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccccc
Confidence 3555555543 567999999999999999999999999999999999999877654 346788999999998886
Q ss_pred ccHHHHHhcCCCCCC--HHHH---HHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 047171 405 TSIKENILIGKPGAS--METV---VKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDE 479 (1224)
Q Consensus 405 ~ti~~ni~~g~~~~~--~~~~---~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE 479 (1224)
.|++||+.++..... .... ........+.+.++.+ |++......+.+||||||||++|||||+.+|++|||||
T Consensus 94 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~llllDE 171 (243)
T TIGR02315 94 LTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERV--GLADKAYQRADQLSGGQQQRVAIARALAQQPDLILADE 171 (243)
T ss_pred ccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 599999987642110 0000 0001112234455555 56666777889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHH
Q 047171 480 ATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLM 539 (1224)
Q Consensus 480 ~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 539 (1224)
||++||+++.+.+.+.|+++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 172 Pt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 234 (243)
T TIGR02315 172 PIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVDLAKKYADRIVGLKAGEIVFDGAPSELD 234 (243)
T ss_pred CcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecCCHHHhC
Confidence 999999999999999998864 37999999999999865 9999999999999999998863
No 383
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-38 Score=354.40 Aligned_cols=193 Identities=30% Similarity=0.547 Sum_probs=165.0
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC----CHHHHhcccEEecCCC--CCCcccHHHHHhcCC
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL----QLKWLRSQMGLVNQEP--ILFSTSIKENILIGK 415 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~ 415 (1224)
+++++||+||||||||||+++|+|+++|++|+|.+||+++... +...+|++||||+|+| .+|+.|+.|||.++.
T Consensus 32 ~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~e~i~~~~ 111 (286)
T PRK13646 32 QGKYYAIVGQTGSGKSTLIQNINALLKPTTGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPESQLFEDTVEREIIFGP 111 (286)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhheEEEecChHhccchhhHHHHHHhhH
Confidence 4679999999999999999999999999999999999998653 3456788999999997 688889999999874
Q ss_pred CC--CCHHHHHHHHHHhcHHHHHHhccccccc-cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHH
Q 047171 416 PG--ASMETVVKAAQAANVHDFIMKLNDGYET-KVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIV 492 (1224)
Q Consensus 416 ~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t-~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i 492 (1224)
.. .+.++..+ .+++.++.+ |+++ .....+.+||||||||++|||||+.+|+||||||||++||+.+...+
T Consensus 112 ~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l 184 (286)
T PRK13646 112 KNFKMNLDEVKN-----YAHRLLMDL--GFSRDVMSQSPFQMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQV 184 (286)
T ss_pred HHcCCCHHHHHH-----HHHHHHHHc--CCChhhhhCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHH
Confidence 21 23333322 234556655 7763 56778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 493 QEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 493 ~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
.+.++++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 185 ~~~l~~l~~~~g~tvl~vtH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 236 (286)
T PRK13646 185 MRLLKSLQTDENKTIILVSHDMNEVARYADEVIVMKEGSIVSQTSPKELFKD 236 (286)
T ss_pred HHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHhC
Confidence 99998864 48999999999999864 999999999999999999988764
No 384
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=4e-38 Score=349.59 Aligned_cols=202 Identities=32% Similarity=0.524 Sum_probs=166.6
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCEecCCC--CHHHHhcccEEecCCCCC
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPV-----KGNILLDGHKIKKL--QLKWLRSQMGLVNQEPIL 402 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~~--~~~~~r~~i~~v~Q~~~l 402 (1224)
++|++|+. +++++++|+|+||||||||+++|+|+++|+ +|+|.++|+++... +....+++++||+|++.+
T Consensus 17 l~~vs~~i---~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (247)
T TIGR00972 17 LKNINLDI---PKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNP 93 (247)
T ss_pred ecceeEEE---CCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCccc
Confidence 44444443 357799999999999999999999999998 99999999998753 355678899999999999
Q ss_pred CcccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhcccccc----ccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 047171 403 FSTSIKENILIGKPG---ASMETVVKAAQAANVHDFIMKLNDGYE----TKVGQFGVQLSGGQKQRIAIARALIRDPKIL 475 (1224)
Q Consensus 403 f~~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~----t~~~~~g~~LSgGq~qriaiARal~~~~~il 475 (1224)
|+.|++||+.++... .+.++..+ .+.+.++.+ |++ ......+.+||||||||++|||||+.+|+++
T Consensus 94 ~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 166 (247)
T TIGR00972 94 FPMSIYDNIAYGPRLHGIKDKKELDE-----IVEESLKKA--ALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVL 166 (247)
T ss_pred CCCCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHc--CCCcchhhHhhCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999875321 11222111 123334444 443 4567788999999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 476 LLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 476 ilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||||++||+.+...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 233 (247)
T TIGR00972 167 LLDEPTSALDPIATGKIEELIQELKKKYTIVIVTHNMQQAARISDRTAFFYDGELVEYGPTEQIFTN 233 (247)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHhcCeEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999987767999999999999865 999999999999999999998653
No 385
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.6e-38 Score=365.09 Aligned_cols=211 Identities=25% Similarity=0.440 Sum_probs=171.8
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEec
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVN 397 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 397 (1224)
|+++|++++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|+++.+++...++++||||+
T Consensus 4 L~~~nls~~y~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~sG~I~l~G~~i~~~~~~~~~~~ig~v~ 83 (402)
T PRK09536 4 IDVSDLSVEFGDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPTAGTVLVAGDDVEALSARAASRRVASVP 83 (402)
T ss_pred EEEeeEEEEECCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCCCcEEEECCEEcCcCCHHHHhcceEEEc
Confidence 4555555555432 367799999999999999999999999999999999999999999888999999999
Q ss_pred CCCCC-CcccHHHHHhcCCCCCC--HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 398 QEPIL-FSTSIKENILIGKPGAS--METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 398 Q~~~l-f~~ti~~ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
|++.+ |+.|++||+.+++.... .... .......+++.++.+ |+.........+||||||||++|||||+++|++
T Consensus 84 q~~~l~~~~tv~e~v~~~~~~~~~~~~~~-~~~~~~~v~~~le~v--gl~~~~~~~~~~LSgGerQRv~IArAL~~~P~i 160 (402)
T PRK09536 84 QDTSLSFEFDVRQVVEMGRTPHRSRFDTW-TETDRAAVERAMERT--GVAQFADRPVTSLSGGERQRVLLARALAQATPV 160 (402)
T ss_pred cCCCCCCCCCHHHHHHhccchhcccccCC-CHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHHcCCCE
Confidence 99987 57799999998752110 0000 000111223333433 444445667789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 475 LLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||||||++||+.+...+.+.|+++. +|+|+|+++|+++.+.. ||+|++|++|++++.|+++|++..
T Consensus 161 LLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~~~~~~adrii~l~~G~iv~~G~~~ev~~~ 229 (402)
T PRK09536 161 LLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLDLAARYCDELVLLADGRVRAAGPPADVLTA 229 (402)
T ss_pred EEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEecCHHHHhCc
Confidence 99999999999999999999998875 58999999999999965 999999999999999999998753
No 386
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.4e-38 Score=347.21 Aligned_cols=207 Identities=28% Similarity=0.403 Sum_probs=168.0
Q ss_pred ceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC----CCceEEECCccCCCCCHHHHhcceEEEecCCC-CCc--
Q 047171 995 IFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP----QSGSVMVDERNIKSYNLRKLRSCIALVSQEPT-LFA-- 1067 (1224)
Q Consensus 995 vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p----~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~-LF~-- 1067 (1224)
+|+|+||+|++||+++|+||||||||||+++|+|+++| ++|+|.+||.++... +..+++++|+||+|. .|.
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~~ 78 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPL--SIRGRHIATIMQNPRTAFNPL 78 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhh--hhhhheeEEEecCchhhcCcc
Confidence 57999999999999999999999999999999999999 899999999988654 233468999999995 343
Q ss_pred ccHHHHHccCCC---CCC---HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEe
Q 047171 1068 GTIRQNIVYGKE---VAT---EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLD 1141 (1224)
Q Consensus 1068 gTIreNl~~~~~---~~~---deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLD 1141 (1224)
.|+.+|+.+... ... ++++.++++..++.+ + ++.....+.+||||||||++||||++++|+|||||
T Consensus 79 ~t~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~-~~~~~~~~~~LS~G~~qrv~laral~~~p~vllLD 150 (230)
T TIGR02770 79 FTMGNHAIETLRSLGKLSKQARALILEALEAVGLPD-------P-EEVLKKYPFQLSGGMLQRVMIALALLLEPPFLIAD 150 (230)
T ss_pred cCHHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCc-------h-HHHHhCChhhcCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 589998854311 111 123444444433321 1 13345566789999999999999999999999999
Q ss_pred ccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCCchhHH
Q 047171 1142 EATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNGGAYYS 1212 (1224)
Q Consensus 1142 EaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~g~y~~ 1212 (1224)
|||++||+.+.+.+.+.|++..+ ++|+|++||+++.+.. ||+|++|++|++++.|+++++... +.+.|.+
T Consensus 151 EPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~-~~~~~~~ 223 (230)
T TIGR02770 151 EPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLGVVARIADEVAVMDDGRIVERGTVKEIFYN-PKHETTR 223 (230)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC-cCCHHHH
Confidence 99999999999999999998753 7899999999999965 999999999999999999999865 3444443
No 387
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-38 Score=351.63 Aligned_cols=207 Identities=34% Similarity=0.553 Sum_probs=169.9
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCC--CCHHHHh
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKK--LQLKWLR 390 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~~~r 390 (1224)
|+++||+++|++. +++++++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+...+|
T Consensus 7 l~~~~l~~~~~~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 86 (253)
T PRK14242 7 MEARGLSFFYGDFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELR 86 (253)
T ss_pred EEEeeeEEEECCeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHh
Confidence 6777777777532 3567999999999999999999999974 689999999999864 3455678
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCC--CC-CH----HHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHH
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKP--GA-SM----ETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIA 463 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qria 463 (1224)
++++||+|++.+|+.|++||+.++.. .. .. +++.++++..++.+. +.+..++.+.+||||||||++
T Consensus 87 ~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~qrv~ 159 (253)
T PRK14242 87 RRVGMVFQKPNPFPKSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDE-------VKDRLHESALGLSGGQQQRLC 159 (253)
T ss_pred hcEEEEecCCCCCcCcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCCHHHHHHHH
Confidence 89999999999998999999987631 11 11 222333333322221 123456778999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 464 IARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 464 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 160 laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14242 160 IARALAVEPEVLLMDEPASALDPIATQKIEELIHELKARYTIIIVTHNMQQAARVSDVTAFFYMGKLIEVGPTEQIFTR 238 (253)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCeEEEEEecHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 999999999999999999999999999999999988778999999999999865 999999999999999999998754
No 388
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=4.7e-38 Score=348.36 Aligned_cols=210 Identities=29% Similarity=0.439 Sum_probs=174.7
Q ss_pred EEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEE
Q 047171 979 ELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIAL 1058 (1224)
Q Consensus 979 ~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1058 (1224)
+++||++. .+|+|+||+|++||++||+|+||||||||+++|.|+++ .+|+|.+||.++...+...+++.++|
T Consensus 2 ~~~~l~~~-------~~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~-~~G~i~~~g~~i~~~~~~~~~~~i~~ 73 (248)
T PRK03695 2 QLNDVAVS-------TRLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP-GSGSIQFAGQPLEAWSAAELARHRAY 73 (248)
T ss_pred cccccchh-------ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC-CCeEEEECCEecCcCCHHHHhhheEE
Confidence 56777774 17999999999999999999999999999999999986 49999999999988888888889999
Q ss_pred EecCCC-CCcccHHHHHccCCCCC-CHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc---
Q 047171 1059 VSQEPT-LFAGTIRQNIVYGKEVA-TEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK--- 1133 (1224)
Q Consensus 1059 V~Qdp~-LF~gTIreNl~~~~~~~-~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~--- 1133 (1224)
+||++. .+..|+++|+.++.... +.++.. ..+++.+..+ |++.........||||||||++||||+++
T Consensus 74 v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~~~ 146 (248)
T PRK03695 74 LSQQQTPPFAMPVFQYLTLHQPDKTRTEAVA-----SALNEVAEAL--GLDDKLGRSVNQLSGGEWQRVRLAAVVLQVWP 146 (248)
T ss_pred ecccCccCCCccHHHHHHhcCccCCCcHHHH-----HHHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhcccc
Confidence 999985 45689999999764321 111111 1123333333 34444455667899999999999999997
Q ss_pred ----CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1134 ----NPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1134 ----~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
+|++|||||||++||+.+.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 147 ~~~p~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 222 (248)
T PRK03695 147 DINPAGQLLLLDEPMNSLDVAQQAALDRLLSELCQQGIAVVMSSHDLNHTLRHADRVWLLKQGKLLASGRRDEVLT 222 (248)
T ss_pred ccCCCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHhC
Confidence 679999999999999999999999998875 47899999999998755 99999999999999999999865
No 389
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-38 Score=355.44 Aligned_cols=193 Identities=26% Similarity=0.468 Sum_probs=162.7
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCC----CCHHHHhcccEEecCCC--CCCcccHHHHHhcCC
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKK----LQLKWLRSQMGLVNQEP--ILFSTSIKENILIGK 415 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~ 415 (1224)
++++++|+||||||||||+++|+|+++|++|+|++||.++.. .+...+|+.||||+|+| .+|..|+.||+.|+.
T Consensus 31 ~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~~~l~~~~ 110 (288)
T PRK13643 31 KGSYTALIGHTGSGKSTLLQHLNGLLQPTEGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPESQLFEETVLKDVAFGP 110 (288)
T ss_pred CCCEEEEECCCCChHHHHHHHHhcCCCCCCcEEEECCEECccccccccHHHHHhhEEEEecCcchhcccchHHHHHHhHH
Confidence 466999999999999999999999999999999999999863 33566888999999998 788899999999874
Q ss_pred CC--CCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHH
Q 047171 416 PG--ASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIV 492 (1224)
Q Consensus 416 ~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i 492 (1224)
.. .+.++..+ .+.+.++.+ |++ ......+.+||||||||++|||||+.+|++|||||||++||+.+...+
T Consensus 111 ~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l 183 (288)
T PRK13643 111 QNFGIPKEKAEK-----IAAEKLEMV--GLADEFWEKSPFELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEM 183 (288)
T ss_pred HHcCCCHHHHHH-----HHHHHHHHc--CCChhhccCCcccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHH
Confidence 32 22333221 123344444 443 345677899999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 493 QEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 493 ~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
.+.++++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 184 ~~~l~~l~~~g~til~vtHd~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 234 (288)
T PRK13643 184 MQLFESIHQSGQTVVLVTHLMDDVADYADYVYLLEKGHIISCGTPSDVFQE 234 (288)
T ss_pred HHHHHHHHHCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEECCHHHHHcC
Confidence 99998764 58999999999999865 999999999999999999998653
No 390
>cd03214 ABC_Iron-Siderophores_B12_Hemin ABC transporters, involved in the uptake of siderophores, heme, and vitamin B12, are widely conserved in bacteria and archaea. Only very few species lack representatives of the siderophore family transporters. The E. coli BtuCD protein is an ABC transporter mediating vitamin B12 uptake. The two ATP-binding cassettes (BtuD) are in close contact with each other, as are the two membrane-spanning subunits (BtuC); this arrangement is distinct from that observed for the E. coli lipid flippase MsbA. The BtuC subunits provide 20 transmembrane helices grouped around a translocation pathway that is closed to the cytoplasm by a gate region, whereas the dimer arrangement of the BtuD subunits resembles the ATP-bound form of the Rad50 DNA repair enzyme. A prominent cytoplasmic loop of BtuC forms the contact region with the ATP-binding cassette and represent a conserved motif among the ABC transporters.
Probab=100.00 E-value=2.2e-38 Score=333.57 Aligned_cols=177 Identities=37% Similarity=0.599 Sum_probs=159.0
Q ss_pred EEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEE
Q 047171 979 ELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIAL 1058 (1224)
Q Consensus 979 ~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~ 1058 (1224)
+++||+++|+. .++|+|+||++++||+++|+|+||||||||+++|.|+++|++|+|.+||.++...+...+++.++|
T Consensus 1 ~~~~l~~~~~~---~~~l~~~~~~i~~G~~~~l~G~nGsGKStLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~i~~ 77 (180)
T cd03214 1 EVENLSVGYGG---RTVLDDLSLSIEAGEIVGILGPNGAGKSTLLKTLAGLLKPSSGEILLDGKDLASLSPKELARKIAY 77 (180)
T ss_pred CeeEEEEEECC---eeeEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCcCCHHHHHHHHhH
Confidence 47899999963 459999999999999999999999999999999999999999999999999998888888999999
Q ss_pred EecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEE
Q 047171 1059 VSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMIL 1138 (1224)
Q Consensus 1059 V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~IL 1138 (1224)
+|| +++..++.+++. ..+.+||||||||++||||++++|++|
T Consensus 78 ~~q---------------------------~l~~~gl~~~~~-----------~~~~~LS~G~~qrl~laral~~~p~ll 119 (180)
T cd03214 78 VPQ---------------------------ALELLGLAHLAD-----------RPFNELSGGERQRVLLARALAQEPPIL 119 (180)
T ss_pred HHH---------------------------HHHHcCCHhHhc-----------CCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 999 445555554432 345679999999999999999999999
Q ss_pred EEeccCCCCCHHHHHHHHHHHHHhcC--CCeEEEEccCchhhh-hcCEEEEEeCCEEEEec
Q 047171 1139 LLDEATSALDSASENLVQEALEKMMV--GRTCVVVAHRLSTIQ-KADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1139 lLDEaTSaLD~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~-~aD~I~vl~~G~Ive~G 1196 (1224)
||||||++||+++.+.+.+.|++..+ ++|+|++||+++.+. .||++++|++|++++.|
T Consensus 120 llDEP~~~LD~~~~~~~~~~l~~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~~~ 180 (180)
T cd03214 120 LLDEPTSHLDIAHQIELLELLRRLARERGKTVVMVLHDLNLAARYADRVILLKDGRIVAQG 180 (180)
T ss_pred EEeCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999999999999998764 789999999999985 49999999999998764
No 391
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-38 Score=348.08 Aligned_cols=208 Identities=31% Similarity=0.474 Sum_probs=170.1
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCC--CCHHHH
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKK--LQLKWL 389 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~~~~ 389 (1224)
-|+++|++++|++. +++++++|+|+||||||||+++|+|+++| ++|+|.++|+++.. .+....
T Consensus 7 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 86 (254)
T PRK14273 7 IIETENLNLFYTDFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILEL 86 (254)
T ss_pred eEEEeeeEEEeCCceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHH
Confidence 47788888887642 25679999999999999999999999997 48999999999853 344567
Q ss_pred hcccEEecCCCCCCcccHHHHHhcCCCC---CCH----HHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHH
Q 047171 390 RSQMGLVNQEPILFSTSIKENILIGKPG---ASM----ETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRI 462 (1224)
Q Consensus 390 r~~i~~v~Q~~~lf~~ti~~ni~~g~~~---~~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qri 462 (1224)
|++|+||+|++.+|+.|++|||.++... ... +++.++++..++.+. +......++.+||||||||+
T Consensus 87 ~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------l~~~~~~~~~~LSgG~~qrv 159 (254)
T PRK14273 87 RRKIGMVFQTPNPFLMSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNE-------VKDKLNTNALSLSGGQQQRL 159 (254)
T ss_pred hhceEEEeeccccccCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchh-------hHHHHhCCcccCCHHHHHHH
Confidence 8899999999999989999999986421 111 122333333222111 12234557789999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 463 AIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 463 aiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|||||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 160 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 239 (254)
T PRK14273 160 CIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKESYTIIIVTHNMQQAGRISDRTAFFLNGCIEEESSTDELFFN 239 (254)
T ss_pred HHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988778999999999999865 999999999999999999998764
No 392
>KOG0060 consensus Long-chain acyl-CoA transporter, ABC superfamily (involved in peroxisome organization and biogenesis) [Lipid transport and metabolism; General function prediction only]
Probab=100.00 E-value=1.7e-35 Score=335.63 Aligned_cols=484 Identities=17% Similarity=0.217 Sum_probs=322.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccccC-CCCHHHHHHHHHhhHHHHHH
Q 047171 690 KSETRLYCLIFLGLAFLTLIANLIQHYNFAIMGEHLVQRVREKMLEKIFTFEIGWFDQD-ENTSAAICARLANEAHLVRS 768 (1224)
Q Consensus 690 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~lr~~~~~~ll~~~~~~fd~~-~~~~g~l~~rls~d~~~i~~ 768 (1224)
......+++.+.++..+..+..+...-..-+...+.+..+|...|+.-....++--|.. .|| -.|+++|++..-.
T Consensus 122 ~~~~~~~~~~~~~~s~~~a~~ky~~~~L~Lr~R~~ltk~lh~~Y~k~~~yYkis~~d~ridNP----DQrltqDv~kf~~ 197 (659)
T KOG0060|consen 122 KRLLFKYVLLIPGISLLNALLKFTTNELYLRFRKNLTKYLHRLYFKGFTYYKLSNLDDRIDNP----DQRLTQDVEKFCR 197 (659)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHHHhccceEEEecccccccCCh----HHHHhHHHHHHHH
Confidence 33344455556666666666666666666666677777777777776665555555533 222 2678888888776
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHccHHH
Q 047171 769 FIADRMSLLIQVFFSASLAYTLSL-LVTWRVAIVMIAVQPLNIGCFYSRSVLMKSMSEKAKKSQSEGSQLASEATTNHRT 847 (1224)
Q Consensus 769 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~lv~l~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~l~gi~t 847 (1224)
.+.+..+.++.+.+.++....-.+ ..+|.-+..++..+.+..++.....+.+-+...++++...+....-++...+...
T Consensus 198 ~l~sl~s~l~~a~~di~~Y~~~l~~s~g~~gp~~i~~Yf~~~~vi~~~L~~pI~~l~~~qeklEGdfRy~h~rlr~NaE~ 277 (659)
T KOG0060|consen 198 QLSSLYSNLLKAPFDLVYYTFRLFESAGWLGPVSIFAYFLIGTVINKTLRGPIVKLTVEQEKLEGDFRYKHSRLRVNAEE 277 (659)
T ss_pred HHHHHHHhhhccceeeehhhhHHhhhcCcccHHHHHHHHHHHHHHHhhhccchhHHHHHHHHhhcchhhheeeeeecchh
Confidence 666666666555544433322222 3344444444444443333444444444455556666677777777788888899
Q ss_pred HHHhccHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----hcCCcCHHHHHHHHHHH-
Q 047171 848 ITAFSSQDRILDLFRETMKGPKKESIKQSWFSGIGLFSSQFLTTASITLTFWYAGRIM----NQGLVSPKQLFQAFFLL- 922 (1224)
Q Consensus 848 Ira~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~g~~t~~~~~~~~~~~- 922 (1224)
|.-|+.++.......+..+...........+.-+...+..++.++..++.+...+.-+ ..+.+++.++...+..-
T Consensus 278 iAFY~g~~~E~~~~~~~f~~Lv~~l~~l~~~r~~l~f~~n~~~Ylg~ilsy~vi~~p~Fs~h~y~~~s~aEL~~~i~~na 357 (659)
T KOG0060|consen 278 IAFYRGGQVEHQRTDQRFRNLVQHLRELMSFRFWLGFIDNIFDYLGGILSYVVIAIPFFSGHVYDDLSPAELSGLISNNA 357 (659)
T ss_pred hhhhccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhheeeEEeeeeecccccCCcCHHHHHHHHhhhH
Confidence 9999887655544444444433333332222223333333333443333322222212 23456777765444322
Q ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCC-------------CCCCCCC-----CCCCCCCcccEEEE
Q 047171 923 ---MSTGKNIADAGSMTSDIAKGSSAIRTIFTILDRKSEID-------------PEDPKAS-----EDIEEPTKGFIELK 981 (1224)
Q Consensus 923 ---~~~~~~~~~~~~~~~~~~~~~~a~~ri~~~~~~~~~~~-------------~~~~~~~-----~~~~~~~~g~I~~~ 981 (1224)
......++.+.....++.+-.+-..||-++.+...+.. .+..... .+..++.+..|+|+
T Consensus 358 ~~~i~Li~~f~~l~~~~~~ls~lsGyt~Ri~el~~~l~d~~~~~~~~~~~~~~~~E~~~~l~~~~G~~~~~~~Dn~i~~e 437 (659)
T KOG0060|consen 358 FVFIYLISAFGRLVDLSRDLSRLSGYTHRIGELMEVLDDLSSGSQECTMEEEELGEAEWGLSLPPGSGKAEPADNAIEFE 437 (659)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHhhhHHHHHHHHHHHHHHhccCCcchhhhhhhhhhhhhccCCCCCCcccccccceEEee
Confidence 22233444444444555555556667766654211110 0000000 01223445679999
Q ss_pred EEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEec
Q 047171 982 NVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQ 1061 (1224)
Q Consensus 982 ~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Q 1061 (1224)
+|++.=|++ +..+.+|+||+|+.|+.+-|+||||||||+|++.|.|+++..+|++.--...-. +.+-|+||
T Consensus 438 ~v~l~tPt~-g~~lie~Ls~~V~~g~~LLItG~sG~GKtSLlRvlggLWp~~~G~l~k~~~~~~--------~~lfflPQ 508 (659)
T KOG0060|consen 438 EVSLSTPTN-GDLLIENLSLEVPSGQNLLITGPSGCGKTSLLRVLGGLWPSTGGKLTKPTDGGP--------KDLFFLPQ 508 (659)
T ss_pred eeeecCCCC-CceeeeeeeeEecCCCeEEEECCCCCchhHHHHHHhcccccCCCeEEecccCCC--------CceEEecC
Confidence 999998865 445678899999999999999999999999999999999999999975332111 34899999
Q ss_pred CCCCCcccHHHHHccCC-------CCCCHHHHHHHHHHHhHHHHHHhcccccccccC-CCCCCCChHHHHHHHHHHHHcc
Q 047171 1062 EPTLFAGTIRQNIVYGK-------EVATEAEIRKAAVLANAHEFISSTEDGYDTYCG-ERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1062 dp~LF~gTIreNl~~~~-------~~~~deei~~al~~a~l~~~I~~lp~gldt~vg-e~G~~LSGGQrQRlaLARAll~ 1133 (1224)
.|++-.||+||-+.|.. ..++|++|.+.++.+++.+.+.. .+|+|+++. +-...||+||+||+|+||.++.
T Consensus 509 rPYmt~GTLRdQvIYP~~~~~~~~~~~~d~~i~r~Le~v~L~hl~~r-~ggld~~~~~dW~dvLS~GEqQRLa~ARLfy~ 587 (659)
T KOG0060|consen 509 RPYMTLGTLRDQVIYPLKAEDMDSKSASDEDILRILENVQLGHLLER-EGGLDQQVDWDWMDVLSPGEQQRLAFARLFYH 587 (659)
T ss_pred CCCccccchhheeeccCccccccccCCCHHHHHHHHHHhhhhhHHHH-hCCCCchhhccHHhhcCHHHHHHHHHHHHHhc
Confidence 99999999999998872 25689999999999999887765 468997775 5577899999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhcCCCeEEEEccCchhhhhcCEEEEEeC
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMMVGRTCVVVAHRLSTIQKADNIVVIKN 1189 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~~~~TvI~IaHrl~ti~~aD~I~vl~~ 1189 (1224)
+|++-+|||+|||+|.+.|..+.+.+++. |.|.|.|.||-+.-+.-|.++-|+.
T Consensus 588 kPk~AiLDE~TSAv~~dvE~~~Yr~~r~~--giT~iSVgHRkSL~kfHd~~L~~~g 641 (659)
T KOG0060|consen 588 KPKFAILDECTSAVTEDVEGALYRKCREM--GITFISVGHRKSLWKFHDYVLRMDG 641 (659)
T ss_pred CCceEEeechhhhccHHHHHHHHHHHHHc--CCeEEEeccHHHHHhhhhEEEEecC
Confidence 99999999999999999999999999887 8999999999999999999999985
No 393
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.5e-38 Score=348.87 Aligned_cols=203 Identities=29% Similarity=0.542 Sum_probs=170.8
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCc-ccH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFS-TSI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~-~ti 407 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.++|++|++.+|+ .|+
T Consensus 16 ~l~~is~~i~---~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 92 (242)
T cd03295 16 AVNNLNLEIA---KGEFLVLIGPSGSGKTTTMKMINRLIEPTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMTV 92 (242)
T ss_pred EeeeeEEEEC---CCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCcH
Confidence 4666666653 567999999999999999999999999999999999999988777778889999999999886 599
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccc--cccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYET--KVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSA 483 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t--~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~ 483 (1224)
+||+.++.. ..+.++ ....+.+.++.+ |+.. ...+.+.+||||||||++||||++++|++|||||||++
T Consensus 93 ~e~l~~~~~~~~~~~~~-----~~~~~~~~l~~l--~l~~~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~ 165 (242)
T cd03295 93 EENIALVPKLLKWPKEK-----IRERADELLALV--GLDPAEFADRYPHELSGGQQQRVGVARALAADPPLLLMDEPFGA 165 (242)
T ss_pred HHHHHHHHHHcCCCHHH-----HHHHHHHHHHHc--CCCcHHHHhcChhhCCHHHHHHHHHHHHHhcCCCEEEecCCccc
Confidence 999987532 111111 112234556665 5553 56778899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 484 LDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 484 lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||+.+...+.+.|.++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 166 LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 226 (242)
T cd03295 166 LDPITRDQLQEEFKRLQQELGKTIVFVTHDIDEAFRLADRIAIMKNGEIVQVGTPDEILRS 226 (242)
T ss_pred CCHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEecCHHHHHcC
Confidence 99999999999998864 38999999999998765 999999999999999999988653
No 394
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-38 Score=351.49 Aligned_cols=204 Identities=33% Similarity=0.574 Sum_probs=168.1
Q ss_pred EEEEeEEEECCC-C----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 328 IEFKDVDFSYPT-R----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 328 i~~~~v~f~y~~-~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
|+++||+|+|++ . .+++++||+||||||||||+++|+|+++|++|+|.++|+++...+..++++.||||
T Consensus 5 l~~~~l~~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v 84 (274)
T PRK13647 5 IEVEDLHFRYKDGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQRGRVKVMGREVNAENEKWVRSKVGLV 84 (274)
T ss_pred EEEEEEEEEeCCCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCceEEEECCEECCCCCHHHHHhhEEEE
Confidence 556666666642 1 35779999999999999999999999999999999999999888888888899999
Q ss_pred cCCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCC
Q 047171 397 NQEP--ILFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDP 472 (1224)
Q Consensus 397 ~Q~~--~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~ 472 (1224)
+|+| .++..|+.||+.|+.. ..+.++..+ .+.+.++.+ |+.........+||||||||++|||||+.+|
T Consensus 85 ~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LSgG~~qrv~laraL~~~p 157 (274)
T PRK13647 85 FQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVER-----RVEEALKAV--RMWDFRDKPPYHLSYGQKKRVAIAGVLAMDP 157 (274)
T ss_pred ecChhhhhccCcHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCChhhCCHHHHHHHHHHHHHHcCC
Confidence 9998 5788899999998632 122222111 122334443 4444456667899999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHH
Q 047171 473 KILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVL 538 (1224)
Q Consensus 473 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l 538 (1224)
++|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+.+++
T Consensus 158 ~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~ 225 (274)
T PRK13647 158 DVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVDLAAEWADQVIVLKEGRVLAEGDKSLL 225 (274)
T ss_pred CEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHh
Confidence 9999999999999999999999998864 58999999999999854 999999999999999998764
No 395
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=1.2e-37 Score=336.38 Aligned_cols=190 Identities=37% Similarity=0.583 Sum_probs=166.4
Q ss_pred ccEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhccc
Q 047171 326 GEIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQM 393 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i 393 (1224)
+.++++|++++|++. +++++++|+|+||||||||+++|+|+++|++|+|.++|.++...+...+|++|
T Consensus 5 ~~l~~~~l~~~~~~~~~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i 84 (207)
T cd03369 5 GEIEVENLSVRYAPDLPPVLKNVSFKVKAGEKIGIVGRTGAGKSTLILALFRFLEAEEGKIEIDGIDISTIPLEDLRSSL 84 (207)
T ss_pred CeEEEEEEEEEeCCCCcccccCceEEECCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEhHHCCHHHHHhhE
Confidence 458888888888642 25679999999999999999999999999999999999999888888888999
Q ss_pred EEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 047171 394 GLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPK 473 (1224)
Q Consensus 394 ~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ 473 (1224)
+||+|+|.+|++|++||+.+..+ .+.+++.++++ +++++.+||||||||++||||++.+|+
T Consensus 85 ~~v~q~~~~~~~tv~~~l~~~~~-~~~~~~~~~l~------------------~~~~~~~LS~G~~qrv~laral~~~p~ 145 (207)
T cd03369 85 TIIPQDPTLFSGTIRSNLDPFDE-YSDEEIYGALR------------------VSEGGLNLSQGQRQLLCLARALLKRPR 145 (207)
T ss_pred EEEecCCcccCccHHHHhcccCC-CCHHHHHHHhh------------------ccCCCCcCCHHHHHHHHHHHHHhhCCC
Confidence 99999999999999999986542 23333322221 356788999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhccCEEEEEeCceEEeecC
Q 047171 474 ILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGS 534 (1224)
Q Consensus 474 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~ 534 (1224)
++||||||++||+++...+.+.|++..+++|+|++||+++.+..||++++|++|++++.|+
T Consensus 146 llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~th~~~~~~~~d~v~~l~~g~i~~~g~ 206 (207)
T cd03369 146 VLVLDEATASIDYATDALIQKTIREEFTNSTILTIAHRLRTIIDYDKILVMDAGEVKEYDH 206 (207)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHhcCCCEEEEEeCCHHHHhhCCEEEEEECCEEEecCC
Confidence 9999999999999999999999998777899999999999998899999999999998875
No 396
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=5.4e-38 Score=336.80 Aligned_cols=195 Identities=23% Similarity=0.388 Sum_probs=168.2
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++...+ ..+|++++
T Consensus 1 l~i~~l~~~~~~---~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~-~~~~~~i~ 76 (201)
T cd03231 1 LEADELTCERDG---RALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPPLAGRVLLNGGPLDFQR-DSIARGLL 76 (201)
T ss_pred CEEEEEEEEeCC---ceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEeccccc-HHhhhheE
Confidence 478999999963 35899999999999999999999999999999999999999999999999886543 56789999
Q ss_pred EEecCCCCC-cccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCC
Q 047171 1058 LVSQEPTLF-AGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPM 1136 (1224)
Q Consensus 1058 ~V~Qdp~LF-~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ 1136 (1224)
|+||++.++ ..|++||+.+..+..+++++.++++..++.++. + ....+||||||||++||||++++|+
T Consensus 77 ~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~l~~~~l~~~~-------~----~~~~~LS~G~~qrl~laral~~~p~ 145 (201)
T cd03231 77 YLGHAPGIKTTLSVLENLRFWHADHSDEQVEEALARVGLNGFE-------D----RPVAQLSAGQQRRVALARLLLSGRP 145 (201)
T ss_pred EeccccccCCCcCHHHHHHhhcccccHHHHHHHHHHcCChhhh-------c----CchhhCCHHHHHHHHHHHHHhcCCC
Confidence 999999876 589999998765444566777777777765432 2 2345799999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhh-hhcCEEEEE
Q 047171 1137 ILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTI-QKADNIVVI 1187 (1224)
Q Consensus 1137 ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti-~~aD~I~vl 1187 (1224)
+|||||||++||+.+.+.+.+.|++.. +++|+|++||+...+ ..||+++++
T Consensus 146 llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~~~~~~~ 198 (201)
T cd03231 146 LWILDEPTTALDKAGVARFAEAMAGHCARGGMVVLTTHQDLGLSEAGARELDL 198 (201)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchhhhhccceeEec
Confidence 999999999999999999999998765 478999999987766 458999877
No 397
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.1e-38 Score=342.61 Aligned_cols=193 Identities=34% Similarity=0.565 Sum_probs=160.0
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCc-ccH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFS-TSI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~-~ti 407 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+. .++.++||+|++.+|. .|+
T Consensus 15 il~~vs~~i~---~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~--~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 15 ALDDLSLTVE---PGEFLALLGPSGCGKTTLLRLIAGLERPDSGEILIDGRDVTGVPP--ERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eecceeEEEc---CCcEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcCcCch--hhccEEEEcCchhhccCCcH
Confidence 4666666653 567999999999999999999999999999999999999876543 4678999999998886 599
Q ss_pred HHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
+||+.++... ...++.. ..+.+.++.+ |++........+||||||||++|||||+.+|++|||||||++||
T Consensus 90 ~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD 162 (213)
T cd03259 90 AENIAFGLKLRGVPKAEIR-----ARVRELLELV--GLEGLLNRYPHELSGGQQQRVALARALAREPSLLLLDEPLSALD 162 (213)
T ss_pred HHHHHhHHHHcCCCHHHHH-----HHHHHHHHHc--CChhhhhcChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 9999876321 1111111 1233455555 56666677788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeec
Q 047171 486 AESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESG 533 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g 533 (1224)
+++...+.+.|.++. .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~g 213 (213)
T cd03259 163 AKLREELREELKELQRELGITTIYVTHDQEEALALADRIAVMNEGRIVQVG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999998864 38999999999999866 9999999999998765
No 398
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-38 Score=365.54 Aligned_cols=200 Identities=31% Similarity=0.466 Sum_probs=166.3
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cHH
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SIK 408 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti~ 408 (1224)
++|++|+. +++++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. +++||||+|++.+|+. |++
T Consensus 19 l~~vsl~i---~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~~G~I~~~g~~i~~~~~~--~~~i~~v~Q~~~l~~~~tv~ 93 (369)
T PRK11000 19 SKDINLDI---HEGEFVVFVGPSGCGKSTLLRMIAGLEDITSGDLFIGEKRMNDVPPA--ERGVGMVFQSYALYPHLSVA 93 (369)
T ss_pred EeeeEEEE---cCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCHh--HCCEEEEeCCcccCCCCCHH
Confidence 34444443 25679999999999999999999999999999999999999876653 4679999999999975 999
Q ss_pred HHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 047171 409 ENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDA 486 (1224)
Q Consensus 409 ~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~ 486 (1224)
|||.|+.. ..+.++.. ..+.+.++.+ |++........+||||||||++|||||+.+|++||||||||+||+
T Consensus 94 eni~~~~~~~~~~~~~~~-----~~~~~~l~~l--gL~~~~~~~~~~LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~ 166 (369)
T PRK11000 94 ENMSFGLKLAGAKKEEIN-----QRVNQVAEVL--QLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDA 166 (369)
T ss_pred HHHHhHHhhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCH
Confidence 99998743 12222211 1233445555 566666777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 487 ESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 487 ~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
.+.+.+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 167 ~~~~~l~~~L~~l~~~~g~tvI~vTHd~~~~~~~~d~i~vl~~G~i~~~g~~~~i~~~ 224 (369)
T PRK11000 167 ALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 224 (369)
T ss_pred HHHHHHHHHHHHHHHHhCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhC
Confidence 99999999998864 38999999999998865 999999999999999999998765
No 399
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=5e-38 Score=345.83 Aligned_cols=202 Identities=27% Similarity=0.448 Sum_probs=169.6
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH-HhcccEEecCCCCCCcc-c
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW-LRSQMGLVNQEPILFST-S 406 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~~v~Q~~~lf~~-t 406 (1224)
.++|++|... ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.++|++|++.+|+. |
T Consensus 15 ~l~~vs~~i~---~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (232)
T cd03218 15 VVNGVSLSVK---QGEIVGLLGPNGAGKTTTFYMIVGLVKPDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRKLT 91 (232)
T ss_pred eeccceeEec---CCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccCCHhHHHhccEEEecCCccccccCc
Confidence 4555555543 56799999999999999999999999999999999999998776554 35679999999999986 9
Q ss_pred HHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCC
Q 047171 407 IKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSAL 484 (1224)
Q Consensus 407 i~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~l 484 (1224)
++||+.++.+. ...++. ...+++.++.+ |++......+.+||||||||++||||++.+|++|||||||++|
T Consensus 92 v~~~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 164 (232)
T cd03218 92 VEENILAVLEIRGLSKKER-----EEKLEELLEEF--HITHLRKSKASSLSGGERRRVEIARALATNPKFLLLDEPFAGV 164 (232)
T ss_pred HHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccC
Confidence 99999875321 111111 12334566666 6777778888999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 485 DAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 485 D~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
|+++.+.+.+.|+++. +++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 165 D~~~~~~~~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 222 (232)
T cd03218 165 DPIAVQDIQKIIKILKDRGIGVLITDHNVRETLSITDRAYIIYEGKVLAEGTPEEIAA 222 (232)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEEeCHHHhhc
Confidence 9999999999998764 58999999999988765 99999999999999999988754
No 400
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.4e-38 Score=348.91 Aligned_cols=211 Identities=33% Similarity=0.536 Sum_probs=172.9
Q ss_pred ccEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCC--CCHHH
Q 047171 326 GEIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKK--LQLKW 388 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~~ 388 (1224)
+.|+++|++++|++. +++++++|+||||||||||+++|+|+++ |++|+|.++|+++.. .+...
T Consensus 12 ~~l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~ 91 (260)
T PRK10744 12 SKIQVRNLNFYYGKFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIAL 91 (260)
T ss_pred ceEEEEEEEEEeCCeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHH
Confidence 457888888888643 3567999999999999999999999986 589999999999853 45567
Q ss_pred HhcccEEecCCCCCCcccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhc--cccccccccCCCCCCChHHHHHHH
Q 047171 389 LRSQMGLVNQEPILFSTSIKENILIGKP---GASMETVVKAAQAANVHDFIMKL--NDGYETKVGQFGVQLSGGQKQRIA 463 (1224)
Q Consensus 389 ~r~~i~~v~Q~~~lf~~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGq~qria 463 (1224)
+|++|+|++|++.+|+.|++||+.++.. ..+.++..+ .+.+.++.+ +.++....++...+||||||||++
T Consensus 92 ~~~~i~~~~q~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~Gq~qrv~ 166 (260)
T PRK10744 92 LRAKVGMVFQKPTPFPMSIYDNIAFGVRLFEKLSRAEMDE-----RVEWALTKAALWNEVKDKLHQSGYSLSGGQQQRLC 166 (260)
T ss_pred HhcceEEEecCCccCcCcHHHHHhhhHhhcCCCCHHHHHH-----HHHHHHHHcCCChhhHHHHhcCCCCCCHHHHHHHH
Confidence 8889999999999999999999987632 122222111 112233332 112234567788999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 464 IARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 464 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 167 laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 245 (260)
T PRK10744 167 IARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQDYTVVIVTHNMQQAARCSDYTAFMYLGELIEFGNTDTIFTK 245 (260)
T ss_pred HHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999988778899999999999865 999999999999999999998754
No 401
>cd03291 ABCC_CFTR1 The CFTR subfamily domain 1. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits, or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=3.8e-37 Score=344.40 Aligned_cols=225 Identities=24% Similarity=0.387 Sum_probs=186.6
Q ss_pred HHHHHHhccCCCCCCCcccccccccccccEEEEeEEEECCC--------CCCCCEEEEEcCCCCcHHHHHHHHhcCCCCC
Q 047171 299 TRIFEMIDRVPVINSEDEIGKTLAYLRGEIEFKDVDFSYPT--------RPDTPTIGLVGSSGSGKSTVISLLERFYDPV 370 (1224)
Q Consensus 299 ~ri~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~v~f~y~~--------~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~ 370 (1224)
+.+.+++..+++.+. ..+.+...+.|+++|+++.... -+++++++|+|+||||||||+++|+|+++|+
T Consensus 15 ~~~~~~~~~~~~~~~----~~~~~~~~~~l~i~nls~~~~~vL~~vs~~i~~Ge~~~liG~NGsGKSTLl~~I~Gl~~p~ 90 (282)
T cd03291 15 EGFGELLEKAKQENN----DRKHSSDDNNLFFSNLCLVGAPVLKNINLKIEKGEMLAITGSTGSGKTSLLMLILGELEPS 90 (282)
T ss_pred HHHHHHHhccccccc----ccccCCCCCeEEEEEEEEecccceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC
Confidence 345566655443222 1222333456888888885311 1357799999999999999999999999999
Q ss_pred CcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCC
Q 047171 371 KGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQF 450 (1224)
Q Consensus 371 ~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~ 450 (1224)
+|+|.++| .|+|++|++.+|+.|++||+.++.. ....++.++++..++.+.+..+|.++++.++++
T Consensus 91 ~G~I~i~g-------------~i~yv~q~~~l~~~tv~enl~~~~~-~~~~~~~~~l~~~~l~~~l~~~~~~~~~~~~~~ 156 (282)
T cd03291 91 EGKIKHSG-------------RISFSSQFSWIMPGTIKENIIFGVS-YDEYRYKSVVKACQLEEDITKFPEKDNTVLGEG 156 (282)
T ss_pred CcEEEECC-------------EEEEEeCcccccccCHHHHhhcccc-cCHHHHHHHHHHhCCHHHHHhccccccceecCC
Confidence 99999998 3999999999999999999998743 233445566666778888999999999999999
Q ss_pred CCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHH-HHHHcCCCeEEEEeCCcchhhccCEEEEEeCceE
Q 047171 451 GVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEA-LDQASQGRTMIIIAHRLSTIRKADLIGVLQSGRV 529 (1224)
Q Consensus 451 g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~-l~~~~~~~t~i~i~H~l~~~~~ad~i~vl~~G~i 529 (1224)
+.+||||||||++|||||+.+|++|||||||++||+++...+.+. ++.+.+++|+|++||+++.+..||+|++|++|++
T Consensus 157 ~~~LSgGq~qrv~lAraL~~~p~iLiLDEPt~gLD~~~~~~l~~~ll~~~~~~~tIiiisH~~~~~~~~d~i~~l~~G~i 236 (282)
T cd03291 157 GITLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEKEIFESCVCKLMANKTRILVTSKMEHLKKADKILILHEGSS 236 (282)
T ss_pred CCcCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHhhCCCEEEEEeCChHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999998888765 4556668999999999999988999999999999
Q ss_pred EeecChHHHHhh
Q 047171 530 IESGSHDVLMQM 541 (1224)
Q Consensus 530 ~~~g~~~~l~~~ 541 (1224)
++.|+++++.+.
T Consensus 237 ~~~g~~~~~~~~ 248 (282)
T cd03291 237 YFYGTFSELQSL 248 (282)
T ss_pred EEECCHHHHHhc
Confidence 999999998754
No 402
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.5e-38 Score=314.06 Aligned_cols=213 Identities=28% Similarity=0.456 Sum_probs=185.9
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+.+|++++-. .+.+|+++||+++|||.+||+||||||||||+++|.|...|++|++.++|+++.++++.++-++-+
T Consensus 2 i~a~nls~~~~---Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~~G~v~~~g~~l~~~~~~~lA~~ra 78 (259)
T COG4559 2 IRAENLSYSLA---GRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPDSGEVTLNGVPLNSWPPEELARHRA 78 (259)
T ss_pred eeeeeeEEEee---cceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCCCCeEeeCCcChhhCCHHHHHHHhh
Confidence 78899998764 346999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCC-CcccHHHHHccCCC-C-----CCHHH--HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1058 LVSQEPTL-FAGTIRQNIVYGKE-V-----ATEAE--IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1058 ~V~Qdp~L-F~gTIreNl~~~~~-~-----~~dee--i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
+.||+..+ |..|++|-+.+|+- . ..+++ ..+++..+++..|-. ..-..||||||||+.+|
T Consensus 79 VlpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~-----------R~y~~LSGGEqQRVqlA 147 (259)
T COG4559 79 VLPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAG-----------RDYRTLSGGEQQRVQLA 147 (259)
T ss_pred hcccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhc-----------cchhhcCchHHHHHHHH
Confidence 99999875 89999999999852 1 11333 566777777665532 22346999999999999
Q ss_pred HHHcc------CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhh-hcCEEEEEeCCEEEEecChhH
Q 047171 1129 RAVLK------NPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQ-KADNIVVIKNGKVVEQGTQSS 1200 (1224)
Q Consensus 1129 RAll~------~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~-~aD~I~vl~~G~Ive~Gt~~e 1200 (1224)
|.|.+ ++++|+||||||+||..-...+.+..+++. +|..|++|=|+|.... .||||++|.+||++..|+|++
T Consensus 148 RvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNLAA~YaDrivll~~Grv~a~g~p~~ 227 (259)
T COG4559 148 RVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNLAAQYADRIVLLHQGRVIASGSPQD 227 (259)
T ss_pred HHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchHHHHhhheeeeeeCCeEeecCCHHH
Confidence 99986 346999999999999999999999999876 5789999999999865 599999999999999999999
Q ss_pred Hhhc
Q 047171 1201 LLSM 1204 (1224)
Q Consensus 1201 Ll~~ 1204 (1224)
.+..
T Consensus 228 vlt~ 231 (259)
T COG4559 228 VLTD 231 (259)
T ss_pred hcCH
Confidence 9874
No 403
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=4.2e-38 Score=343.47 Aligned_cols=199 Identities=28% Similarity=0.474 Sum_probs=165.3
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCC-cccH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILF-STSI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf-~~ti 407 (1224)
.++|++|+.. +++.+||+||||||||||+++|+|+++|++|+|.++|+++.... ..++++++||+|++.+| ..|+
T Consensus 17 il~~is~~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 17 AVDDLSLNVY---KGEIFGLLGHNGAGKTTTLKMLTGELRPTSGTAYINGYSIRTDR-KAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred eecceEEEEc---CCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEecccch-HHHhhhEEEecCcCCccccCCH
Confidence 4677777663 56799999999999999999999999999999999999986543 56678899999999988 4699
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
+||+.++.. ....++.. ..+++.++.+ |++........+||||||||++||||++.+|++|||||||++||
T Consensus 93 ~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD 165 (220)
T cd03263 93 REHLRFYARLKGLPKSEIK-----EEVELLLRVL--GLTDKANKRARTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLD 165 (220)
T ss_pred HHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhChhhhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCC
Confidence 999987421 11221111 1233445544 44445566678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHH
Q 047171 486 AESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVL 538 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l 538 (1224)
+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++
T Consensus 166 ~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~ 219 (220)
T cd03263 166 PASRRAIWDLILEVRKGRSIILTTHSMDEAEALCDRIAIMSDGKLRCIGSPQEL 219 (220)
T ss_pred HHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecCCHHHc
Confidence 99999999999988778999999999999975 999999999999999998875
No 404
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-37 Score=352.98 Aligned_cols=193 Identities=30% Similarity=0.508 Sum_probs=162.5
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCC----CCHHHHhcccEEecCCC--CCCcccHHHHHhcCC
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKK----LQLKWLRSQMGLVNQEP--ILFSTSIKENILIGK 415 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~ 415 (1224)
+++++||+||||||||||+++|+|+++|++|+|.+||+++.. .+....|+.||||+|+| .+|+.||+|||.|+.
T Consensus 32 ~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~ 111 (290)
T PRK13634 32 SGSYVAIIGHTGSGKSTLLQHLNGLLQPTSGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGP 111 (290)
T ss_pred CCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHH
Confidence 467999999999999999999999999999999999999863 34556788999999998 688889999999874
Q ss_pred C--CCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHH
Q 047171 416 P--GASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIV 492 (1224)
Q Consensus 416 ~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i 492 (1224)
. ..+.++..+ .+++.++.+ |++ .....++.+||||||||++|||||+.+|++|||||||++||+.+...+
T Consensus 112 ~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l 184 (290)
T PRK13634 112 MNFGVSEEDAKQ-----KAREMIELV--GLPEELLARSPFELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEM 184 (290)
T ss_pred HHcCCCHHHHHH-----HHHHHHHHC--CCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHH
Confidence 2 123333222 123445554 554 335677899999999999999999999999999999999999999999
Q ss_pred HHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 493 QEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 493 ~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
.+.|.++. .|.|+|+|||+++.+.. ||+|++|++|++++.|+.+++.+.
T Consensus 185 ~~~L~~l~~~~g~tviiitHd~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 236 (290)
T PRK13634 185 MEMFYKLHKEKGLTTVLVTHSMEDAARYADQIVVMHKGTVFLQGTPREIFAD 236 (290)
T ss_pred HHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 99998864 38999999999999865 999999999999999999988654
No 405
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-38 Score=353.95 Aligned_cols=193 Identities=30% Similarity=0.489 Sum_probs=161.5
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCC------------------------CCHHHHhcccEEec
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKK------------------------LQLKWLRSQMGLVN 397 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~------------------------~~~~~~r~~i~~v~ 397 (1224)
+++++||+||||||||||+++|+|+++|++|+|+++|.++.. .+...+|+.||||+
T Consensus 32 ~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~ 111 (305)
T PRK13651 32 QGEFIAIIGQTGSGKTTFIEHLNALLLPDTGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVF 111 (305)
T ss_pred CCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEEeceecccccccccccccccccccccccccccchHHHHHhceEEEe
Confidence 466999999999999999999999999999999999987632 13456788999999
Q ss_pred CCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCC
Q 047171 398 QEP--ILFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDP 472 (1224)
Q Consensus 398 Q~~--~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~ 472 (1224)
|+| .+|..||+|||.|+.. ..+.++..+ .+.+.++.+ |++ ........+||||||||++|||||+.+|
T Consensus 112 Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGqkqrvalA~aL~~~P 184 (305)
T PRK13651 112 QFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKK-----RAAKYIELV--GLDESYLQRSPFELSGGQKRRVALAGILAMEP 184 (305)
T ss_pred eCcccccccccHHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHc--CCChhhhhCChhhCCHHHHHHHHHHHHHHhCC
Confidence 986 6788899999998743 223333322 123444554 554 4567888999999999999999999999
Q ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 473 KILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 473 ~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
++|||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+.+++.+.
T Consensus 185 ~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~~~~~~adrv~vl~~G~i~~~g~~~~~~~~ 255 (305)
T PRK13651 185 DFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLDNVLEWTKRTIFFKDGKIIKDGDTYDILSD 255 (305)
T ss_pred CEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHHHHHHhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999999998864 58999999999998755 999999999999999999998654
No 406
>cd03216 ABC_Carb_Monos_I This family represents the domain I of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. Pentoses include xylose, arabinose, and ribose. Important hexoses include glucose, galactose, and fructose. In members of the Carb_monos family, the single hydrophobic gene product forms a homodimer while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=8.1e-38 Score=323.10 Aligned_cols=159 Identities=31% Similarity=0.589 Sum_probs=148.5
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH-HHHhcce
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL-RKLRSCI 1056 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~-~~lR~~i 1056 (1224)
|+++|++++|++ .++|+|+||+|++||+++|+|+||||||||+++|+|+++|++|+|.+||.++...+. +..|+++
T Consensus 1 l~~~~l~~~~~~---~~vl~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~~~~~~~~~~~i 77 (163)
T cd03216 1 LELRGITKRFGG---VKALDGVSLSVRRGEVHALLGENGAGKSTLMKILSGLYKPDSGEILVDGKEVSFASPRDARRAGI 77 (163)
T ss_pred CEEEEEEEEECC---eEEEeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEECCcCCHHHHHhcCe
Confidence 579999999963 369999999999999999999999999999999999999999999999999988776 4467889
Q ss_pred EEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCC
Q 047171 1057 ALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPM 1136 (1224)
Q Consensus 1057 ~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ 1136 (1224)
+|+|| ||||||||++||||++++|+
T Consensus 78 ~~~~q-------------------------------------------------------LS~G~~qrl~laral~~~p~ 102 (163)
T cd03216 78 AMVYQ-------------------------------------------------------LSVGERQMVEIARALARNAR 102 (163)
T ss_pred EEEEe-------------------------------------------------------cCHHHHHHHHHHHHHhcCCC
Confidence 99999 99999999999999999999
Q ss_pred EEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 047171 1137 ILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVE 1194 (1224)
Q Consensus 1137 ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive 1194 (1224)
+|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||++++|++|++++
T Consensus 103 illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~d~~~~l~~g~i~~ 162 (163)
T cd03216 103 LLILDEPTAALTPAEVERLFKVIRRLRAQGVAVIFISHRLDEVFEIADRVTVLRDGRVVG 162 (163)
T ss_pred EEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999998875 47899999999998865 99999999999976
No 407
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=9.5e-38 Score=344.06 Aligned_cols=202 Identities=30% Similarity=0.506 Sum_probs=170.5
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCC-cccH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILF-STSI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf-~~ti 407 (1224)
.++||+|... ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+... ++.++|++|++.++ ..|+
T Consensus 16 ~l~~vs~~i~---~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~i~~~~~~~-~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 16 ALDDVSFTVR---PGEFVALLGPNGAGKSTLFSLLTRLYVAQEGQISVAGHDLRRAPRAA-LARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEeeeEEEEc---CCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEcccCChhh-hhhEEEeCCCCCCcccCcH
Confidence 4666776653 57799999999999999999999999999999999999998766544 45899999999874 5699
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
+||+.++.. ....++.. ..+.++++.+ |++......+.+||||||||++|||||+++|+++||||||++||
T Consensus 92 ~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrl~laral~~~p~llllDEP~~~LD 164 (236)
T TIGR03864 92 RQNLRYHAALHGLSRAEAR-----ERIAALLARL--GLAERADDKVRELNGGHRRRVEIARALLHRPALLLLDEPTVGLD 164 (236)
T ss_pred HHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCC
Confidence 999987532 11222111 1234566665 67777788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 486 AESERIVQEALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+.+.+.+.+.|.++. +|+|+|++||+++.+..||+|++|++|++++.|+++++.+.
T Consensus 165 ~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 222 (236)
T TIGR03864 165 PASRAAIVAHVRALCRDQGLSVLWATHLVDEIEADDRLVVLHRGRVLADGAAAELRGA 222 (236)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEEecChhhHhhCCEEEEEeCCeEEEeCCHHHHHHH
Confidence 999999999998875 48999999999999988999999999999999999988764
No 408
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=4.3e-38 Score=342.88 Aligned_cols=192 Identities=33% Similarity=0.525 Sum_probs=161.3
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHH----HHhcccEEecCCCCCC
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLK----WLRSQMGLVNQEPILF 403 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~----~~r~~i~~v~Q~~~lf 403 (1224)
..++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..+++++||+|++.+|
T Consensus 18 ~il~~~s~~i~---~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 18 QALKGVSLSIE---KGEFVAIVGPSGSGKSTLLNILGGLDRPTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eEEeeeEEEEc---CCCEEEEEcCCCCCHHHHHHHHhCCcCCCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 45777777764 5679999999999999999999999999999999999999877643 2457899999999998
Q ss_pred cc-cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCC
Q 047171 404 ST-SIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEA 480 (1224)
Q Consensus 404 ~~-ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ 480 (1224)
.. |++||+.++... ...++. ...+.+.++.+ |++......+.+||||||||++|||||+.+|++||||||
T Consensus 95 ~~~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~lllLDEP 167 (218)
T cd03255 95 PDLTALENVELPLLLAGVPKKER-----RERAEELLERV--GLGDRLNHYPSELSGGQQQRVAIARALANDPKIILADEP 167 (218)
T ss_pred CCCcHHHHHHHHHhhcCCCHHHH-----HHHHHHHHHHc--CCchhhhcChhhcCHHHHHHHHHHHHHccCCCEEEEcCC
Confidence 76 999999986421 111111 12234556666 666667778899999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhccCEEEEEeCceE
Q 047171 481 TSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRKADLIGVLQSGRV 529 (1224)
Q Consensus 481 ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~ad~i~vl~~G~i 529 (1224)
|++||+++.+.+.+.|.++.+ |+|+|++||+++.+..||++++|++|++
T Consensus 168 ~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~d~v~~l~~G~i 218 (218)
T cd03255 168 TGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPELAEYADRIIELRDGKI 218 (218)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHHHhhhcEEEEeeCCcC
Confidence 999999999999999988753 8999999999999888999999999974
No 409
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=5.8e-38 Score=341.22 Aligned_cols=191 Identities=30% Similarity=0.535 Sum_probs=155.1
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHH---HHhcccEEecCCCCCCc-
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLK---WLRSQMGLVNQEPILFS- 404 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~~i~~v~Q~~~lf~- 404 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .+|++++|++|++.+|.
T Consensus 18 il~~isl~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (216)
T TIGR00960 18 ALDNLNFHIT---KGEMVFLVGHSGAGKSTFLKLILGIEKPTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLSD 94 (216)
T ss_pred EEEeeEEEEc---CCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEehhhcChhHHHHHHHhceEEecCcccccc
Confidence 3555555542 5679999999999999999999999999999999999998766543 36789999999999886
Q ss_pred ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 047171 405 TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATS 482 (1224)
Q Consensus 405 ~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts 482 (1224)
.|++||+.++.. ....++. ...+.+.++.+ |++........+||||||||++|||||+.+|++|||||||+
T Consensus 95 ~tv~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~ 167 (216)
T TIGR00960 95 RTVYDNVAFPLRIIGVPPRDA-----NERVSAALEKV--GLEGKAHALPMQLSGGEQQRVAIARAIVHKPPLLLADEPTG 167 (216)
T ss_pred ccHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 499999987521 1111111 11223344444 45555566778999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceE
Q 047171 483 ALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRV 529 (1224)
Q Consensus 483 ~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i 529 (1224)
+||+++.+.+.+.|.++. +|+|+|+|||+++.+.. ||+|++|++|+|
T Consensus 168 ~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~G~i 216 (216)
T TIGR00960 168 NLDPELSRDIMRLFEEFNRRGTTVLVATHDINLVETYRHRTLTLSRGRL 216 (216)
T ss_pred cCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCcC
Confidence 999999999999998864 48999999999999975 999999999975
No 410
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-37 Score=349.20 Aligned_cols=209 Identities=33% Similarity=0.542 Sum_probs=172.4
Q ss_pred ccEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCC--CCHHH
Q 047171 326 GEIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKK--LQLKW 388 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~~~ 388 (1224)
+.|+++||+++|++. +++++++|+||||||||||+++|+|+++| ++|+|+++|+++.. .+...
T Consensus 18 ~~l~~~nl~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~ 97 (267)
T PRK14235 18 IKMRARDVSVFYGEKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVE 97 (267)
T ss_pred ceEEEEeEEEEECCEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHH
Confidence 468889999988643 35779999999999999999999999975 89999999999864 34566
Q ss_pred HhcccEEecCCCCCCcccHHHHHhcCCC--CC--CH----HHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHH
Q 047171 389 LRSQMGLVNQEPILFSTSIKENILIGKP--GA--SM----ETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQ 460 (1224)
Q Consensus 389 ~r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~--~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~q 460 (1224)
+|+.++||+|++.+|+.|+.||+.++.. .. +. +++.++++..++.++ +.+..++.+.+|||||||
T Consensus 98 ~~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~-------~~~~~~~~~~~LSgGq~q 170 (267)
T PRK14235 98 LRARVGMVFQKPNPFPKSIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEE-------VKDRLHEPGTGLSGGQQQ 170 (267)
T ss_pred HhhceEEEecCCCCCCCcHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchh-------hhHHhhCCcccCCHHHHH
Confidence 7889999999999998899999987531 11 11 122223332222211 123456778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHH
Q 047171 461 RIAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLM 539 (1224)
Q Consensus 461 riaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 539 (1224)
|++|||||+.+|++|||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++.
T Consensus 171 rv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~~~tiiivtH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 171 RLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQNYTIVIVTHSMQQAARVSQRTAFFHLGNLVEVGDTEKMF 250 (267)
T ss_pred HHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhcCCeEEEEEcCHHHHHhhCCEEEEEECCEEEEeCCHHHHH
Confidence 999999999999999999999999999999999999988778899999999999965 9999999999999999999987
Q ss_pred hh
Q 047171 540 QM 541 (1224)
Q Consensus 540 ~~ 541 (1224)
..
T Consensus 251 ~~ 252 (267)
T PRK14235 251 TN 252 (267)
T ss_pred hC
Confidence 53
No 411
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=1.1e-37 Score=359.57 Aligned_cols=206 Identities=25% Similarity=0.399 Sum_probs=173.3
Q ss_pred ccEEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCE----ecCCCCHHHH---h-cccEEec
Q 047171 326 GEIEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGH----KIKKLQLKWL---R-SQMGLVN 397 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~----~~~~~~~~~~---r-~~i~~v~ 397 (1224)
+..-++|+||..+ ++++++|+|+||||||||+++|+|+++|++|+|+++|. ++...+...+ | ++|+||+
T Consensus 36 ~~~~l~~vsf~i~---~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~vf 112 (382)
T TIGR03415 36 LVVGVANASLDIE---EGEICVLMGLSGSGKSSLLRAVNGLNPVSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMVF 112 (382)
T ss_pred CEEEEEeeEEEEc---CCCEEEEECCCCCcHHHHHHHHhCCCCCCCcEEEECCEecccccccCCHHHHHHHhcCCEEEEE
Confidence 4567999999974 57799999999999999999999999999999999997 5666665544 3 5799999
Q ss_pred CCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 398 QEPILFS-TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 398 Q~~~lf~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
|++.+|+ .|++||+.++.. ..+.++. ...+.+.++.+ |++......+.+||||||||++|||||+.+|+|
T Consensus 113 Q~~~l~p~~Tv~eNi~~~~~~~g~~~~~~-----~~~a~e~le~v--gL~~~~~~~~~~LSgGq~QRV~LARALa~~P~I 185 (382)
T TIGR03415 113 QKFALMPWLTVEENVAFGLEMQGMPEAER-----RKRVDEQLELV--GLAQWADKKPGELSGGMQQRVGLARAFAMDADI 185 (382)
T ss_pred CCCcCCCCCcHHHHHHHHHHhcCCCHHHH-----HHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9999997 599999998742 1122211 12233445555 565556777789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 475 LLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||||||+||+.+...+++.|.++.+ ++|+|+|||+++++.. ||+|++|++|++++.|++++++..
T Consensus 186 LLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~e~~~l~DrI~vl~~G~iv~~g~~~ei~~~ 255 (382)
T TIGR03415 186 LLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLDEALKIGNRIAIMEGGRIIQHGTPEEIVLN 255 (382)
T ss_pred EEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecCHHHHhhC
Confidence 999999999999999999999988653 8999999999999855 999999999999999999999865
No 412
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-38 Score=362.14 Aligned_cols=206 Identities=27% Similarity=0.455 Sum_probs=173.6
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
.|+++|++++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|+++.+.++ .++.||||
T Consensus 19 ~l~l~~v~~~~~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~~G~I~i~g~~i~~~~~--~~r~ig~v 96 (377)
T PRK11607 19 LLEIRNLTKSFDGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPTAGQIMLDGVDLSHVPP--YQRPINMM 96 (377)
T ss_pred eEEEEeEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCCceEEEECCEECCCCCH--HHCCEEEE
Confidence 48888888888642 3567999999999999999999999999999999999999987664 46789999
Q ss_pred cCCCCCCcc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 047171 397 NQEPILFST-SIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPK 473 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ 473 (1224)
+|++.+|+. ||+|||.|+.. ..+..+..+ .+.+.++.+ |+......+..+|||||||||||||||+.+|+
T Consensus 97 fQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~-----~v~~~l~~l--~L~~~~~~~~~~LSgGq~QRVaLARAL~~~P~ 169 (377)
T PRK11607 97 FQSYALFPHMTVEQNIAFGLKQDKLPKAEIAS-----RVNEMLGLV--HMQEFAKRKPHQLSGGQRQRVALARSLAKRPK 169 (377)
T ss_pred eCCCccCCCCCHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 999999976 99999998743 122222221 223445554 55556677888999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 474 ILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 474 ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+||||||||+||+.+...+.+.+.++. .|.|+|+|||+++++.. ||+|++|++|++++.|+++|+...
T Consensus 170 lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~ea~~laDri~vl~~G~i~~~g~~~~~~~~ 240 (377)
T PRK11607 170 LLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQEEAMTMAGRIAIMNRGKFVQIGEPEEIYEH 240 (377)
T ss_pred EEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHHHHHHhCCEEEEEeCCEEEEEcCHHHHHhC
Confidence 999999999999999999988887653 47999999999999765 999999999999999999999875
No 413
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=7.8e-38 Score=342.75 Aligned_cols=191 Identities=32% Similarity=0.493 Sum_probs=160.7
Q ss_pred eeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEecCCCCCc-ccHHHHH
Q 047171 996 FKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVSQEPTLFA-GTIRQNI 1074 (1224)
Q Consensus 996 L~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~Qdp~LF~-gTIreNl 1074 (1224)
|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+.+ .+|+||++.+|. .|++||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~-----~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPTSGGVILEGKQITEPGPD-----RMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEECCCCChh-----heEEecCcccCCCCCHHHHH
Confidence 5799999999999999999999999999999999999999999999998765432 489999999987 6999999
Q ss_pred ccCC----CCCCHHH----HHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCC
Q 047171 1075 VYGK----EVATEAE----IRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSA 1146 (1224)
Q Consensus 1075 ~~~~----~~~~dee----i~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSa 1146 (1224)
.++. +..++++ +.+.++..+ ++........+||||||||++|||||+++|++|||||||++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~-----------l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~g 144 (230)
T TIGR01184 76 ALAVDRVLPDLSKSERRAIVEEHIALVG-----------LTEAADKRPGQLSGGMKQRVAIARALSIRPKVLLLDEPFGA 144 (230)
T ss_pred HHHHHhcccCCCHHHHHHHHHHHHHHcC-----------CHHHHcCChhhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 8642 1223222 233333333 33333445567999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1147 LDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1147 LD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+..+++
T Consensus 145 LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 203 (230)
T TIGR01184 145 LDALTRGNLQEELMQIWEEHRVTVLMVTHDVDEALLLSDRVVMLTNGPAANIGQILEVP 203 (230)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeCCcEecccCceecc
Confidence 99999999999998875 37899999999999865 9999999999999999876664
No 414
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=7.4e-38 Score=341.03 Aligned_cols=194 Identities=29% Similarity=0.503 Sum_probs=160.4
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti 407 (1224)
.++|++|..+ +++.++|+|+||||||||+++|+|+++|++|+|.++|+++.. ...++|++++|++|++.+|+. |+
T Consensus 20 il~~~sl~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 20 AVDGVSFTVK---PGEVTGLLGPNGAGKTTTLRMLAGLLEPDAGFATVDGFDVVK-EPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eecceEEEEc---CCcEEEEECCCCCCHHHHHHHHhCCcCCCCceEEECCEEccc-CHHHHHhhEEEecCCcccCcCCCH
Confidence 3445555442 467999999999999999999999999999999999999875 345678899999999999985 99
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
+||+.+... ..+.++.. ..+++.++.+ |++......+.+||||||||++||||++.+|++|||||||++||
T Consensus 96 ~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD 168 (218)
T cd03266 96 RENLEYFAGLYGLKGDELT-----ARLEELADRL--GMEELLDRRVGGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLD 168 (218)
T ss_pred HHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHHhhhhhhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCC
Confidence 999986422 11222211 1233455555 66666778889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeec
Q 047171 486 AESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESG 533 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g 533 (1224)
+.+.+.+.+.|.++. +|+|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 169 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~i~~l~~G~i~~~~ 218 (218)
T cd03266 169 VMATRALREFIRQLRALGKCILFSTHIMQEVERLCDRVVVLHRGRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhcCEEEEEECCEEeecC
Confidence 999999999998864 58999999999999875 9999999999998754
No 415
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-38 Score=382.21 Aligned_cols=216 Identities=25% Similarity=0.473 Sum_probs=180.9
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCC--CCceEEECCccCCCCCHHH-Hh
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDP--QSGSVMVDERNIKSYNLRK-LR 1053 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p--~~G~I~idG~di~~~~~~~-lR 1053 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++| ++|+|.++|.++...+... +|
T Consensus 5 ~l~~~nl~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~ 81 (506)
T PRK13549 5 LLEMKNITKTFGG---VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEELQASNIRDTER 81 (506)
T ss_pred eEEEeeeEEEeCC---eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHH
Confidence 4899999999963 4699999999999999999999999999999999999996 8999999999998777654 46
Q ss_pred cceEEEecCCCCCc-ccHHHHHccCCCC-----CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHH
Q 047171 1054 SCIALVSQEPTLFA-GTIRQNIVYGKEV-----ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIAL 1127 (1224)
Q Consensus 1054 ~~i~~V~Qdp~LF~-gTIreNl~~~~~~-----~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaL 1127 (1224)
++++||||++.+|. .|++||+.++... .+.++..+. +.+++..+ |++........+||||||||++|
T Consensus 82 ~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgGqkqrv~l 154 (506)
T PRK13549 82 AGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLR-----AQKLLAQL--KLDINPATPVGNLGLGQQQLVEI 154 (506)
T ss_pred CCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHH-----HHHHHHHc--CCCCCcccchhhCCHHHHHHHHH
Confidence 88999999998886 5999999876321 122222211 22333332 34333445556899999999999
Q ss_pred HHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1128 ARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1128 ARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
||||+.+|+|||||||||+||+.+...+.+.|.++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 155 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~ 231 (506)
T PRK13549 155 AKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLNEVKAISDTICVIRDGRHIGTRPAAGMT 231 (506)
T ss_pred HHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHHhcCEEEEEECCEEeeecccccCC
Confidence 999999999999999999999999999999998874 47899999999999876 9999999999999999988764
No 416
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=8.4e-38 Score=363.02 Aligned_cols=228 Identities=26% Similarity=0.429 Sum_probs=186.2
Q ss_pred cEEEEEEEEECCCCCC-ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCC----CceEEECCccCCCCCHHH
Q 047171 977 FIELKNVFFSYPSRPD-QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQ----SGSVMVDERNIKSYNLRK 1051 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~-~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~----~G~I~idG~di~~~~~~~ 1051 (1224)
-++++|++..|..... .++++||||+|.+||.+||||.|||||||++++|+|+.++. +|+|.+||.|+..++.+.
T Consensus 5 lL~V~nL~v~~~~~~~~~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~ 84 (539)
T COG1123 5 LLEVENLTVEFATDGGRVPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSERE 84 (539)
T ss_pred eEEEeceEEEEecCCcceeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHH
Confidence 5899999999975522 25899999999999999999999999999999999999987 899999999999988776
Q ss_pred Hh----cceEEEecCCC-CCc--ccHHHHHc----cCCCCCC---HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCC
Q 047171 1052 LR----SCIALVSQEPT-LFA--GTIRQNIV----YGKEVAT---EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQL 1117 (1224)
Q Consensus 1052 lR----~~i~~V~Qdp~-LF~--gTIreNl~----~~~~~~~---deei~~al~~a~l~~~I~~lp~gldt~vge~G~~L 1117 (1224)
+| +.|++|||||. .++ .||.+-|. ...+... .++..+.++.+++ |+.-.. ..-+.+|
T Consensus 85 ~r~~rg~~Ia~i~Q~p~~slnP~~tIg~Qi~E~~~~h~~~~~~ea~~~a~elL~~Vgl-------~~~~~~--~~yPheL 155 (539)
T COG1123 85 MRKLRGKRIAMIFQDPMTSLNPVMTIGDQIREALRLHGKGSRAEARKRAVELLEQVGL-------PDPERR--DRYPHQL 155 (539)
T ss_pred HHHhccccEEEEecCchhhcCchhhHHHHHHHHHHHhccccHHHHHHHHHHHHHHcCC-------CChhhh--ccCCccc
Confidence 54 67999999995 554 36665553 2211111 1233334444443 322111 3467889
Q ss_pred ChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEE
Q 047171 1118 SGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVE 1194 (1224)
Q Consensus 1118 SGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive 1194 (1224)
|||||||+.||+||..+|++||+||||++||+.+++.|.+.|+++. .|.++|+|||++..+.. ||||+||.+|+++|
T Consensus 156 SGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHDl~Vva~~aDrv~Vm~~G~iVE 235 (539)
T COG1123 156 SGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHDLGVVAELADRVVVMYKGEIVE 235 (539)
T ss_pred CchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCCHHHHHHhcCeEEEEECCEEEE
Confidence 9999999999999999999999999999999999999999999887 58899999999999977 99999999999999
Q ss_pred ecChhHHhhcCCCchhHHHH
Q 047171 1195 QGTQSSLLSMGNGGAYYSLI 1214 (1224)
Q Consensus 1195 ~Gt~~eLl~~~~~g~y~~l~ 1214 (1224)
.|+.++++++ +...|.+..
T Consensus 236 ~G~~~~i~~~-p~hpYT~~L 254 (539)
T COG1123 236 TGPTEEILSN-PQHPYTRGL 254 (539)
T ss_pred ecCHHHHHhc-cCCcccHHH
Confidence 9999999998 455565543
No 417
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=346.57 Aligned_cols=209 Identities=31% Similarity=0.490 Sum_probs=167.3
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecC--CCCHHHHh
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIK--KLQLKWLR 390 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~--~~~~~~~r 390 (1224)
|+++||+++|++. .++++++|+||||||||||+++|+|+++| ++|+|.++|+++. +.+...+|
T Consensus 5 l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 84 (253)
T PRK14267 5 IETVNLRVYYGSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVR 84 (253)
T ss_pred EEEEeEEEEeCCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHh
Confidence 5555666655432 25679999999999999999999999987 4999999999987 44556678
Q ss_pred cccEEecCCCCCCcc-cHHHHHhcCCC--CC--CHHHHHHHHHHhcHHHHHHhc--cccccccccCCCCCCChHHHHHHH
Q 047171 391 SQMGLVNQEPILFST-SIKENILIGKP--GA--SMETVVKAAQAANVHDFIMKL--NDGYETKVGQFGVQLSGGQKQRIA 463 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~-ti~~ni~~g~~--~~--~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGq~qria 463 (1224)
++++|++|++.+|+. |+.||+.++.. .. ..++..+. +.+.++.+ ...+.......+.+||||||||++
T Consensus 85 ~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~ 159 (253)
T PRK14267 85 REVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDER-----VEWALKKAALWDEVKDRLNDYPSNLSGGQRQRLV 159 (253)
T ss_pred hceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHH-----HHHHHHHcCCccchhhhhccChhhCCHHHHHHHH
Confidence 899999999999976 99999987531 10 12221111 12223332 111123456778899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 464 IARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 464 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||||+++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 160 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (253)
T PRK14267 160 IARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKKEYTIVLVTHSPAQAARVSDYVAFLYLGKLIEVGPTRKVFEN 238 (253)
T ss_pred HHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999987778999999999999875 999999999999999999998754
No 418
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-37 Score=349.80 Aligned_cols=207 Identities=31% Similarity=0.497 Sum_probs=171.4
Q ss_pred EEEEeEEEECCC-C----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecC--CCCHHHHhcccE
Q 047171 328 IEFKDVDFSYPT-R----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIK--KLQLKWLRSQMG 394 (1224)
Q Consensus 328 i~~~~v~f~y~~-~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~~i~ 394 (1224)
|+++||+|+|++ . .+|+++||+|+||||||||+++|+|+++|++|+|.++|+++. ..+...+|+.||
T Consensus 6 l~~~~l~~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~ig 85 (283)
T PRK13636 6 LKVEELNYNYSDGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPSSGRILFDGKPIDYSRKGLMKLRESVG 85 (283)
T ss_pred EEEEeEEEEeCCCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCccEEEECCEECCCCcchHHHHHhhEE
Confidence 677777777742 2 356799999999999999999999999999999999999984 334566888999
Q ss_pred EecCCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 395 LVNQEP--ILFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 395 ~v~Q~~--~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
||+|++ .+|+.|++||+.++.. ..+.++..+. +.+.++.+ |+.......+.+||||||||++|||||+.
T Consensus 86 ~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--gL~~~~~~~~~~LS~G~~qrl~laraL~~ 158 (283)
T PRK13636 86 MVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKR-----VDNALKRT--GIEHLKDKPTHCLSFGQKKRVAIAGVLVM 158 (283)
T ss_pred EEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHH-----HHHHHHHC--CChhhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 999998 5788899999987532 1222222111 22334444 55555677889999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|++|||||||++||+.+...+.+.++++.+ |+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 159 ~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 232 (283)
T PRK13636 159 EPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAE 232 (283)
T ss_pred CCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999988653 8999999999999974 999999999999999999998753
No 419
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.8e-37 Score=342.22 Aligned_cols=207 Identities=26% Similarity=0.395 Sum_probs=167.5
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHH-HHhcccEEe
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLK-WLRSQMGLV 396 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~-~~r~~i~~v 396 (1224)
|+++||+++|++. .++++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ..++.++|+
T Consensus 6 l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 85 (237)
T PRK11614 6 LSFDKVSAHYGKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRATSGRIVFDGKDITDWQTAKIMREAVAIV 85 (237)
T ss_pred EEEEeEEEeeCCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCCceEEECCEecCCCCHHHHHHhCEEEe
Confidence 5555566555432 25779999999999999999999999999999999999999887754 367789999
Q ss_pred cCCCCCCcc-cHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 047171 397 NQEPILFST-SIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKIL 475 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~il 475 (1224)
+|++.+|+. |++||+.++......++..+. +++.+..++. ++........+||||||||++||||++.+|+||
T Consensus 86 ~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~-----~~~~l~~~~~-l~~~~~~~~~~LS~G~~qrl~la~al~~~p~il 159 (237)
T PRK11614 86 PEGRRVFSRMTVEENLAMGGFFAERDQFQER-----IKWVYELFPR-LHERRIQRAGTMSGGEQQMLAIGRALMSQPRLL 159 (237)
T ss_pred ccCcccCCCCcHHHHHHHhhhccChhHHHHH-----HHHHHHHHHH-HHHHHhCchhhCCHHHHHHHHHHHHHHhCCCEE
Confidence 999999975 999999886432222222211 2233333321 222344567899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 476 LLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 476 ilDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++..
T Consensus 160 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 226 (237)
T PRK11614 160 LLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNANQALKLADRGYVLENGHVVLEDTGDALLA 226 (237)
T ss_pred EEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHHHHHhhCCEEEEEeCCEEEeeCCHHHHhc
Confidence 9999999999999999999998764 58999999999998765 99999999999999999999864
No 420
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-37 Score=345.55 Aligned_cols=202 Identities=30% Similarity=0.468 Sum_probs=165.3
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCCCCHHHHhcccEEecCCCCCC-
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILF- 403 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf- 403 (1224)
++|++|+. +++++++|+||||||||||+++|+|+++| ++|+|.++|.++...+...+|+.||||+|++.+|
T Consensus 19 l~~is~~i---~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 19 LDGVNLEI---PDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eecceeEE---cCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 44444444 25679999999999999999999999974 7999999999998888778889999999999765
Q ss_pred cccHHHHHhcCCCC----CCHHHHHHHHHHhcHHHHHHhccccc----cccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 047171 404 STSIKENILIGKPG----ASMETVVKAAQAANVHDFIMKLNDGY----ETKVGQFGVQLSGGQKQRIAIARALIRDPKIL 475 (1224)
Q Consensus 404 ~~ti~~ni~~g~~~----~~~~~~~~~~~~~~~~~~i~~l~~g~----~t~~~~~g~~LSgGq~qriaiARal~~~~~il 475 (1224)
+.|++||+.++... ...++.. ..+.+.++.+ |+ +......+.+||||||||++|||||+++|++|
T Consensus 96 ~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~ll 168 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKSKKELQ-----ERVRWALEKA--QLWDEVKDRLDAPAGKLSGGQQQRLCIARALAFQPEVL 168 (250)
T ss_pred CCcHHHHHHHHHHhccccCCHHHHH-----HHHHHHHHHc--CCCcchhhhhcCCcccCCHHHHHHHHHHHHHhcCCCEE
Confidence 56999999876321 0111111 1122334433 22 23456677899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 476 LLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 476 ilDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 169 lLDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (250)
T PRK14247 169 LADEPTANLDPENTAKIESLFLELKKDMTIVLVTHFPQQAARISDYVAFLYKGQIVEWGPTREVFTN 235 (250)
T ss_pred EEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCeEEEECCHHHHHcC
Confidence 999999999999999999999987778999999999999865 999999999999999999998754
No 421
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=2e-37 Score=378.72 Aligned_cols=213 Identities=25% Similarity=0.451 Sum_probs=181.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHh-cc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLR-SC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR-~~ 1055 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+...++ +.
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~ 87 (510)
T PRK15439 11 LLCARSISKQYSG---VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPDSGTLEIGGNPCARLTPAKAHQLG 87 (510)
T ss_pred eEEEEeEEEEeCC---ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCCCCHHHHHhCC
Confidence 5999999999963 4599999999999999999999999999999999999999999999999999887776654 57
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCCCCC--HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKEVAT--EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~~~~--deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
++||||++.+|. .|++||+.++..... ++++.++++.. |++........+||||||||++|||||+
T Consensus 88 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LSgG~~qrv~la~aL~ 156 (510)
T PRK15439 88 IYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAAL-----------GCQLDLDSSAGSLEVADRQIVEILRGLM 156 (510)
T ss_pred EEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHc-----------CCCccccCChhhCCHHHHHHHHHHHHHH
Confidence 999999998886 599999988643211 12333333333 3333334455679999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
++|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 157 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 229 (510)
T PRK15439 157 RDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLPEIRQLADRISVMRDGTIALSGKTADLST 229 (510)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEecChHHcCH
Confidence 9999999999999999999999999998875 47899999999999866 99999999999999999988764
No 422
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-37 Score=349.20 Aligned_cols=207 Identities=32% Similarity=0.529 Sum_probs=171.7
Q ss_pred EEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEE
Q 047171 328 IEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGL 395 (1224)
Q Consensus 328 i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~ 395 (1224)
|+++||+++|++. .+|++++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|||
T Consensus 6 l~~~~l~~~~~~~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~~G~i~~~g~~i~~~~~~~~~~~i~~ 85 (279)
T PRK13635 6 IRVEHISFRYPDAATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPEAGTITVGGMVLSEETVWDVRRQVGM 85 (279)
T ss_pred EEEEEEEEEeCCCCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCcEEEECCEECCcCcHHHHhhheEE
Confidence 6677777777531 2567999999999999999999999999999999999999988877778889999
Q ss_pred ecCCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccC
Q 047171 396 VNQEP--ILFSTSIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRD 471 (1224)
Q Consensus 396 v~Q~~--~lf~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~ 471 (1224)
++|++ .+++.|+.|||.++... .+.++..+ .+.+.+..+ |++........+||||||||++|||||+.+
T Consensus 86 ~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~laral~~~ 158 (279)
T PRK13635 86 VFQNPDNQFVGATVQDDVAFGLENIGVPREEMVE-----RVDQALRQV--GMEDFLNREPHRLSGGQKQRVAIAGVLALQ 158 (279)
T ss_pred EEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHH-----HHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHcC
Confidence 99998 45677999999986321 12222211 122333333 445556667789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 472 PKILLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 472 ~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|++|||||||++||+.+...+.+.|.++.+ |+|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 159 p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (279)
T PRK13635 159 PDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDEAAQADRVIVMNKGEILEEGTPEEIFKS 230 (279)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHHHHcCCEEEEEECCEEEEECCHHHHhcC
Confidence 999999999999999999999999988753 7999999999999988999999999999999999988754
No 423
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7e-38 Score=339.29 Aligned_cols=193 Identities=26% Similarity=0.467 Sum_probs=158.1
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti 407 (1224)
.++|++|... ++ .++|+||||||||||+++|+|+++|++|+|.++|.++.+.+ ..++++++|++|++.+|.. |+
T Consensus 15 ~l~~vs~~i~---~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~-~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 15 ALDGVSLTLG---PG-MYGLLGPNGAGKTTLMRILATLTPPSSGTIRIDGQDVLKQP-QKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEcceeEEEc---CC-cEEEECCCCCCHHHHHHHHhCCCCCCccEEEECCCccccch-HHHHhheEEecCCCcccccCCH
Confidence 5666666653 36 89999999999999999999999999999999999988766 6678899999999999876 99
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
+||+.+... ..+.++..+ .+.+.++.+ |++........+||||||||++||||++.+|++|||||||++||
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 162 (211)
T cd03264 90 REFLDYIAWLKGIPSKEVKA-----RVDEVLELV--NLGDRAKKKIGSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLD 162 (211)
T ss_pred HHHHHHHHHHhCCCHHHHHH-----HHHHHHHHC--CCHHHHhCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 999986421 111111111 122333333 33333445668899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeec
Q 047171 486 AESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESG 533 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g 533 (1224)
+.+.+.+.+.|++..+++|+|+|||+++.+.. ||++++|++|++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~tii~vsH~~~~~~~~~d~i~~l~~g~i~~~g 211 (211)
T cd03264 163 PEERIRFRNLLSELGEDRIVILSTHIVEDVESLCNQVAVLNKGKLVFEG 211 (211)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEecC
Confidence 99999999999988777999999999999975 9999999999998765
No 424
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=1.6e-37 Score=348.43 Aligned_cols=207 Identities=23% Similarity=0.408 Sum_probs=169.1
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHH---HHhcccE
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLK---WLRSQMG 394 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~---~~r~~i~ 394 (1224)
|+++||+++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. .++++++
T Consensus 8 l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~ 87 (269)
T PRK11831 8 VDMRGVSFTRGNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPDHGEILFDGENIPAMSRSRLYTVRKRMS 87 (269)
T ss_pred EEEeCeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccChhhHHHHhhcEE
Confidence 5556666655422 35679999999999999999999999999999999999998876543 3577899
Q ss_pred EecCCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 395 LVNQEPILFST-SIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 395 ~v~Q~~~lf~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
|++|++.+|+. |+.||+.++.. ..+.++. ...+.+.++.+ |++........+||||||||++|||||+.
T Consensus 88 ~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LSgGq~qrv~laral~~ 160 (269)
T PRK11831 88 MLFQSGALFTDMNVFDNVAYPLREHTQLPAPLL-----HSTVMMKLEAV--GLRGAAKLMPSELSGGMARRAALARAIAL 160 (269)
T ss_pred EEecccccCCCCCHHHHHHHHHHHccCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhc
Confidence 99999999976 99999987521 1112111 11223344444 55555667788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|++|||||||++||+.+.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 161 ~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (269)
T PRK11831 161 EPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVPEVLSIADHAYIVADKKIVAHGSAQALQAN 234 (269)
T ss_pred CCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHHHHHHhhCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999998864 37999999999999876 999999999999999999998764
No 425
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-37 Score=339.45 Aligned_cols=199 Identities=26% Similarity=0.480 Sum_probs=163.4
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti 407 (1224)
.++|++|... +++++||+||||||||||+++|+|+++|++|+|.++|.++... ...++++++|++|++.+++. |+
T Consensus 15 il~~vs~~i~---~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~-~~~~~~~i~~~~q~~~~~~~~tv 90 (220)
T cd03265 15 AVRGVSFRVR---RGEIFGLLGPNGAGKTTTIKMLTTLLKPTSGRATVAGHDVVRE-PREVRRRIGIVFQDLSVDDELTG 90 (220)
T ss_pred eeeceeEEEC---CCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecCcC-hHHHhhcEEEecCCccccccCcH
Confidence 4667777663 5679999999999999999999999999999999999988653 35667789999999988875 99
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
+||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++||||++.+|++|||||||++||
T Consensus 91 ~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD 163 (220)
T cd03265 91 WENLYIHARLYGVPGAERR-----ERIDELLDFV--GLLEAADRLVKTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLD 163 (220)
T ss_pred HHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CCHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCC
Confidence 999987421 11111111 1223445554 44444566678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-C-CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHH
Q 047171 486 AESERIVQEALDQAS-Q-GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVL 538 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~-~-~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l 538 (1224)
+++.+.+.+.|.++. + |+|+|++||+++.+.. ||+|++|++|++++.|+++++
T Consensus 164 ~~~~~~l~~~l~~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~ 219 (220)
T cd03265 164 PQTRAHVWEYIEKLKEEFGMTILLTTHYMEEAEQLCDRVAIIDHGRIIAEGTPEEL 219 (220)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEeCChHHc
Confidence 999999999998764 3 7899999999999876 999999999999999988764
No 426
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=1.5e-37 Score=353.41 Aligned_cols=207 Identities=29% Similarity=0.490 Sum_probs=170.4
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
.|+++||+++|++. ++++++||+||||||||||+++|+|+++|++|+|.++|+++...+ ...|++||||
T Consensus 7 ~i~i~~l~k~~~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~~G~v~i~G~~~~~~~-~~~~~~ig~v 85 (306)
T PRK13537 7 PIDFRNVEKRYGDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPDAGSISLCGEPVPSRA-RHARQRVGVV 85 (306)
T ss_pred eEEEEeEEEEECCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEecccch-HHHHhcEEEE
Confidence 47777777777542 357799999999999999999999999999999999999997654 4578899999
Q ss_pred cCCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 047171 397 NQEPILFS-TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPK 473 (1224)
Q Consensus 397 ~Q~~~lf~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ 473 (1224)
||++.++. .|++||+.+... ..+..+..+ .+.+.++.+ |+.........+||||||||++|||||+.+|+
T Consensus 86 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~la~aL~~~P~ 158 (306)
T PRK13537 86 PQFDNLDPDFTVRENLLVFGRYFGLSAAAARA-----LVPPLLEFA--KLENKADAKVGELSGGMKRRLTLARALVNDPD 158 (306)
T ss_pred eccCcCCCCCcHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCchHhcCchhhCCHHHHHHHHHHHHHhCCCC
Confidence 99999886 599999986321 122222222 123344443 34444455667899999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 474 ILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 474 ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|||||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 159 lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 228 (306)
T PRK13537 159 VLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFMEEAERLCDRLCVIEEGRKIAEGAPHALIES 228 (306)
T ss_pred EEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHhc
Confidence 999999999999999999999998874 58999999999999976 999999999999999999998754
No 427
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1.2e-37 Score=335.72 Aligned_cols=185 Identities=32% Similarity=0.509 Sum_probs=156.1
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCC--CCCccc
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEP--ILFSTS 406 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~--~lf~~t 406 (1224)
.++|++|+.. ++++++|+||||||||||+++|+|+++|++|+|.++|.++.. ...+++++|++|++ .+|+.|
T Consensus 15 ~l~~v~~~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~---~~~~~~i~~~~q~~~~~~~~~t 88 (205)
T cd03226 15 ILDDLSLDLY---AGEIIALTGKNGAGKTTLAKILAGLIKESSGSILLNGKPIKA---KERRKSIGYVMQDVDYQLFTDS 88 (205)
T ss_pred eeeeeeEEEc---CCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEhhh---HHhhcceEEEecChhhhhhhcc
Confidence 5788888764 567999999999999999999999999999999999998854 45677899999998 467889
Q ss_pred HHHHHhcCCCCCC--HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCC
Q 047171 407 IKENILIGKPGAS--METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSAL 484 (1224)
Q Consensus 407 i~~ni~~g~~~~~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~l 484 (1224)
++||+.++.+... .+++. +.++.+ |++........+||||||||++|||||+.+|++|||||||++|
T Consensus 89 v~e~l~~~~~~~~~~~~~~~---------~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~L 157 (205)
T cd03226 89 VREELLLGLKELDAGNEQAE---------TVLKDL--DLYALKERHPLSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGL 157 (205)
T ss_pred HHHHHhhhhhhcCccHHHHH---------HHHHHc--CCchhcCCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccC
Confidence 9999988643221 12233 334444 4444456667899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHH-cCCCeEEEEeCCcchhhc-cCEEEEEeCceEE
Q 047171 485 DAESERIVQEALDQA-SQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVI 530 (1224)
Q Consensus 485 D~~~~~~i~~~l~~~-~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~ 530 (1224)
|+++.+.+.+.|+++ .+|+|+|++||+++.+.. ||+|++|++|+++
T Consensus 158 D~~~~~~l~~~l~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~iv 205 (205)
T cd03226 158 DYKNMERVGELIRELAAQGKAVIVITHDYEFLAKVCDRVLLLANGAIV 205 (205)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEC
Confidence 999999999999886 468999999999999975 9999999999975
No 428
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=1.8e-37 Score=342.95 Aligned_cols=203 Identities=33% Similarity=0.574 Sum_probs=170.1
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC--CHHHHhcccEEecCCCCCCc-c
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL--QLKWLRSQMGLVNQEPILFS-T 405 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~--~~~~~r~~i~~v~Q~~~lf~-~ 405 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|.++... +..+++++++|++|++.+|. .
T Consensus 16 il~~~s~~i~---~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (240)
T PRK09493 16 VLHNIDLNID---QGEVVVIIGPSGSGKSTLLRCINKLEEITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPHL 92 (240)
T ss_pred EeeeeeEEEc---CCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCChhHHHHhhceEEEecccccCCCC
Confidence 4566666653 5779999999999999999999999999999999999998764 34567889999999998886 5
Q ss_pred cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCC
Q 047171 406 SIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATS 482 (1224)
Q Consensus 406 ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts 482 (1224)
|++||+.++.. ..+.++.. ..+.+.++.+ |++.....++..||||||||++||||++.+|+++||||||+
T Consensus 93 tv~~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~ 165 (240)
T PRK09493 93 TALENVMFGPLRVRGASKEEAE-----KQARELLAKV--GLAERAHHYPSELSGGQQQRVAIARALAVKPKLMLFDEPTS 165 (240)
T ss_pred cHHHHHHhHHHHhcCCCHHHHH-----HHHHHHHHHc--CChHHHhcChhhcCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 99999987631 11222211 1234556655 67766778889999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 483 ALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 483 ~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+||+++...+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 166 ~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (240)
T PRK09493 166 ALDPELRHEVLKVMQDLAEEGMTMVIVTHEIGFAEKVASRLIFIDKGRIAEDGDPQVLIKN 226 (240)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeeCCHHHHhcC
Confidence 999999999999998764 58999999999999975 999999999999999999988654
No 429
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=3.2e-37 Score=341.52 Aligned_cols=207 Identities=25% Similarity=0.452 Sum_probs=171.3
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH-HhcccEEecCCCCCCcc-c
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW-LRSQMGLVNQEPILFST-S 406 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~~v~Q~~~lf~~-t 406 (1224)
.++|++|+.. ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .++.++|++|++.+|++ |
T Consensus 17 ~l~~vs~~i~---~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 93 (242)
T TIGR03411 17 ALNDLSLYVD---PGELRVIIGPNGAGKTTMMDVITGKTRPDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENLT 93 (242)
T ss_pred EeeeeeEEEc---CCcEEEEECCCCCCHHHHHHHHhCCCCCCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCCC
Confidence 4555555543 56799999999999999999999999999999999999998776654 35679999999999986 9
Q ss_pred HHHHHhcCCCCCC-H-HH---HHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 047171 407 IKENILIGKPGAS-M-ET---VVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEAT 481 (1224)
Q Consensus 407 i~~ni~~g~~~~~-~-~~---~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~t 481 (1224)
++||+.++..... . .. .........++++++.+ |++........+||||||||++||||++.+|++|||||||
T Consensus 94 v~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LS~Ge~qrv~laral~~~p~~lllDEPt 171 (242)
T TIGR03411 94 VFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETI--GLADEADRLAGLLSHGQKQWLEIGMLLMQDPKLLLLDEPV 171 (242)
T ss_pred HHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHc--CCchhhcCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCc
Confidence 9999988642100 0 00 00011122345666666 6666778888999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 482 SALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 482 s~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 172 ~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~~~~~~~~~~~~~ 231 (242)
T TIGR03411 172 AGMTDEETEKTAELLKSLAGKHSVVVVEHDMEFVRSIADKVTVLHQGSVLAEGSLDQVQA 231 (242)
T ss_pred cCCCHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCeEEeeCCHHHHhc
Confidence 999999999999999988778999999999999976 99999999999999999998764
No 430
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.1e-37 Score=379.54 Aligned_cols=217 Identities=23% Similarity=0.397 Sum_probs=180.6
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH-Hhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK-LRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~ 1055 (1224)
.|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|.|+++|++|+|.++|.++...+... .|++
T Consensus 5 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~ 81 (510)
T PRK09700 5 YISMAGIGKSFGP---VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPTKGTITINNINYNKLDHKLAAQLG 81 (510)
T ss_pred eEEEeeeEEEcCC---eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCCccEEEECCEECCCCCHHHHHHCC
Confidence 4899999999963 46999999999999999999999999999999999999999999999999998877655 4567
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCC------C---CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKE------V---ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRI 1125 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~------~---~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRl 1125 (1224)
++||||++.+|. .|++||+.++.. . .+.++.++ .+.+.+..+ |++........+||||||||+
T Consensus 82 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrv 154 (510)
T PRK09700 82 IGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRV-----RAAMMLLRV--GLKVDLDEKVANLSISHKQML 154 (510)
T ss_pred eEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHH-----HHHHHHHHc--CCCCCcccchhhCCHHHHHHH
Confidence 999999998886 599999987531 0 01112211 122233322 333333445568999999999
Q ss_pred HHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhh
Q 047171 1126 ALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLS 1203 (1224)
Q Consensus 1126 aLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~ 1203 (1224)
+|||||+.+|+||||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 155 ~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (510)
T PRK09700 155 EIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLAEIRRICDRYTVMKDGSSVCSGMVSDVSN 234 (510)
T ss_pred HHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEeeecchhhCCH
Confidence 99999999999999999999999999999999998875 47899999999999876 99999999999999999988754
No 431
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.8e-37 Score=333.83 Aligned_cols=195 Identities=21% Similarity=0.365 Sum_probs=167.0
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|+. .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.... ..++++++
T Consensus 2 l~~~~l~~~~~~---~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~~G~v~~~g~~~~~~~-~~~~~~~~ 77 (204)
T PRK13538 2 LEARNLACERDE---RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLARPDAGEVLWQGEPIRRQR-DEYHQDLL 77 (204)
T ss_pred eEEEEEEEEECC---EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEcccch-HHhhhheE
Confidence 689999999963 45999999999999999999999999999999999999999999999999987654 45778999
Q ss_pred EEecCCCCCc-ccHHHHHccCCCC---CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHcc
Q 047171 1058 LVSQEPTLFA-GTIRQNIVYGKEV---ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLK 1133 (1224)
Q Consensus 1058 ~V~Qdp~LF~-gTIreNl~~~~~~---~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~ 1133 (1224)
|++|++.++. .|++||+.++.+. .+++++.++++..++.++. ......||||||||++||||+++
T Consensus 78 ~~~~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~-----------~~~~~~LS~G~~qrl~la~al~~ 146 (204)
T PRK13538 78 YLGHQPGIKTELTALENLRFYQRLHGPGDDEALWEALAQVGLAGFE-----------DVPVRQLSAGQQRRVALARLWLT 146 (204)
T ss_pred EeCCccccCcCCcHHHHHHHHHHhcCccHHHHHHHHHHHcCCHHHh-----------hCChhhcCHHHHHHHHHHHHHhc
Confidence 9999998876 6999999875321 2345666677766665443 23345799999999999999999
Q ss_pred CCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEE
Q 047171 1134 NPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVI 1187 (1224)
Q Consensus 1134 ~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl 1187 (1224)
+|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. .+|++++
T Consensus 147 ~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~i~~~~~~~~~~ 202 (204)
T PRK13538 147 RAPLWILDEPFTAIDKQGVARLEALLAQHAEQGGMVILTTHQDLPVASDKVRKLRL 202 (204)
T ss_pred CCCEEEEeCCCccCCHHHHHHHHHHHHHHHHCCCEEEEEecChhhhccCCceEEec
Confidence 999999999999999999999999999864 47899999999999966 5677766
No 432
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-37 Score=358.58 Aligned_cols=196 Identities=29% Similarity=0.497 Sum_probs=167.5
Q ss_pred eEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC----CHHHHhcccEEecCCCCCCcc-c
Q 047171 332 DVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL----QLKWLRSQMGLVNQEPILFST-S 406 (1224)
Q Consensus 332 ~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~r~~i~~v~Q~~~lf~~-t 406 (1224)
|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++.+. +....+++++||+|++.+|+. |
T Consensus 16 ~vsl~i~---~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLP---AQGITAIFGRSGAGKTSLINAISGLTRPQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEc---CCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 6777763 5679999999999999999999999999999999999998653 234467899999999999964 9
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 047171 407 IKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDA 486 (1224)
Q Consensus 407 i~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~ 486 (1224)
++||+.++......+++ .+.++.+ |++.....+..+||||||||++|||||+.+|++||||||||+||+
T Consensus 93 v~enl~~~~~~~~~~~~---------~~~l~~~--gl~~~~~~~~~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~ 161 (352)
T PRK11144 93 VRGNLRYGMAKSMVAQF---------DKIVALL--GIEPLLDRYPGSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDL 161 (352)
T ss_pred HHHHHHhhhhhhhHHHH---------HHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCH
Confidence 99999987542222233 3344444 555566777889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 487 ESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 487 ~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
.+.+.+.+.|+++.+ |+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 162 ~~~~~l~~~L~~l~~~~g~tii~vTHd~~~~~~~~d~i~~l~~G~i~~~g~~~~i~~~ 219 (352)
T PRK11144 162 PRKRELLPYLERLAREINIPILYVSHSLDEILRLADRVVVLEQGKVKAFGPLEEVWAS 219 (352)
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEecCHHHHHHhCCEEEEEeCCEEEEecCHHHHHhC
Confidence 999999999987643 7899999999998866 999999999999999999999875
No 433
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=341.71 Aligned_cols=202 Identities=26% Similarity=0.445 Sum_probs=170.1
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH-HhcccEEecCCCCCCcc-c
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW-LRSQMGLVNQEPILFST-S 406 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~~v~Q~~~lf~~-t 406 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .|+.++|++|++.+|+. |
T Consensus 18 ~l~~~sl~i~---~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 94 (241)
T PRK10895 18 VVEDVSLTVN---SGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRLS 94 (241)
T ss_pred EEeeeeEEEc---CCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccCc
Confidence 4566666653 57799999999999999999999999999999999999998777544 57789999999998875 9
Q ss_pred HHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCC
Q 047171 407 IKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSA 483 (1224)
Q Consensus 407 i~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~ 483 (1224)
++||+.++.. ..+.++ ....+++.++.+ |++........+||||||||++||||++.+|++|||||||++
T Consensus 95 v~enl~~~~~~~~~~~~~~-----~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~ 167 (241)
T PRK10895 95 VYDNLMAVLQIRDDLSAEQ-----REDRANELMEEF--HIEHLRDSMGQSLSGGERRRVEIARALAANPKFILLDEPFAG 167 (241)
T ss_pred HHHHHhhhhhcccccCHHH-----HHHHHHHHHHHc--CCHHHhhcchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 9999987532 111111 122345666666 666667788899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 484 LDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 484 lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
||+.+...+.+.+.++. +|+|+|++||+++.+.. ||++++|++|++++.|++++++.
T Consensus 168 LD~~~~~~l~~~l~~~~~~g~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~ 226 (241)
T PRK10895 168 VDPISVIDIKRIIEHLRDSGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEILQ 226 (241)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhcCEEEEEeCCeEEeeCCHHHHhc
Confidence 99999999999998764 58999999999988765 99999999999999999998864
No 434
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.3e-37 Score=330.48 Aligned_cols=197 Identities=30% Similarity=0.470 Sum_probs=169.7
Q ss_pred cEEEEEEEEECCCCCC------ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHH
Q 047171 977 FIELKNVFFSYPSRPD------QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLR 1050 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~------~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~ 1050 (1224)
.++++|++..|+.+.. ..+++||||+|++||++||||.|||||||+.++|+|+++|++|+|+++|.|+..++
T Consensus 4 ll~v~~l~k~f~~~~~~~~~~~v~avd~Vsf~i~~ge~~glVGESG~GKSTlgr~i~~L~~pt~G~i~f~g~~i~~~~-- 81 (268)
T COG4608 4 LLEVKNLKKYFPVGKGFGKKRYVKAVDGVSFSIKEGETLGLVGESGCGKSTLGRLILGLEEPTSGEILFEGKDITKLS-- 81 (268)
T ss_pred eEEEeccEEEEecccccCcccceEEecceeEEEcCCCEEEEEecCCCCHHHHHHHHHcCcCCCCceEEEcCcchhhcc--
Confidence 4789999999975321 36899999999999999999999999999999999999999999999999987765
Q ss_pred HHhcceEEEecCCCCCcccHHHHHccCCCCCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHH
Q 047171 1051 KLRSCIALVSQEPTLFAGTIRQNIVYGKEVATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARA 1130 (1224)
Q Consensus 1051 ~lR~~i~~V~Qdp~LF~gTIreNl~~~~~~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARA 1130 (1224)
.....+++.+.++.+++.+. ........||||||||++||||
T Consensus 82 ----------------------------~~~~~~~v~elL~~Vgl~~~----------~~~ryPhelSGGQrQRi~IARA 123 (268)
T COG4608 82 ----------------------------KEERRERVLELLEKVGLPEE----------FLYRYPHELSGGQRQRIGIARA 123 (268)
T ss_pred ----------------------------hhHHHHHHHHHHHHhCCCHH----------HhhcCCcccCchhhhhHHHHHH
Confidence 11234567788887776542 1224456799999999999999
Q ss_pred HccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc--CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHhhcCCC
Q 047171 1131 VLKNPMILLLDEATSALDSASENLVQEALEKMM--VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLLSMGNG 1207 (1224)
Q Consensus 1131 ll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~--~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl~~~~~ 1207 (1224)
|.-+|+++++|||||+||...++.|.+.+.++. .+-|.++|||+++.++. ||||.||..|+|+|.|+-+++..+ +.
T Consensus 124 Lal~P~liV~DEpvSaLDvSiqaqIlnLL~dlq~~~~lt~lFIsHDL~vv~~isdri~VMy~G~iVE~g~~~~~~~~-p~ 202 (268)
T COG4608 124 LALNPKLIVADEPVSALDVSVQAQILNLLKDLQEELGLTYLFISHDLSVVRYISDRIAVMYLGKIVEIGPTEEVFSN-PL 202 (268)
T ss_pred HhhCCcEEEecCchhhcchhHHHHHHHHHHHHHHHhCCeEEEEEEEHHhhhhhcccEEEEecCceeEecCHHHHhhC-CC
Confidence 999999999999999999999999999998765 37899999999999988 999999999999999999999987 56
Q ss_pred chhHHHH
Q 047171 1208 GAYYSLI 1214 (1224)
Q Consensus 1208 g~y~~l~ 1214 (1224)
..|.+..
T Consensus 203 HpYTk~L 209 (268)
T COG4608 203 HPYTKAL 209 (268)
T ss_pred CHHHHHH
Confidence 6676553
No 435
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-37 Score=339.77 Aligned_cols=186 Identities=29% Similarity=0.503 Sum_probs=157.5
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH---Hh-cccEEecCCCCCCcc-cHHHHHhcCCC
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW---LR-SQMGLVNQEPILFST-SIKENILIGKP 416 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r-~~i~~v~Q~~~lf~~-ti~~ni~~g~~ 416 (1224)
++++++|+||||||||||+++|+|+++|++|+|.++|+++...+... +| +.++|++|++.+|+. |++||+.++..
T Consensus 34 ~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~ 113 (233)
T PRK11629 34 EGEMMAIVGSSGSGKSTLLHLLGGLDTPTSGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLL 113 (233)
T ss_pred CCcEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEEcCcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHH
Confidence 46699999999999999999999999999999999999998877643 33 679999999998875 99999987421
Q ss_pred --CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHH
Q 047171 417 --GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQE 494 (1224)
Q Consensus 417 --~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~ 494 (1224)
....++.. ..+.+.++.+ |++....+...+||||||||++||||++.+|++|||||||++||+.+...+.+
T Consensus 114 ~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~ 186 (233)
T PRK11629 114 IGKKKPAEIN-----SRALEMLAAV--GLEHRANHRPSELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQ 186 (233)
T ss_pred hcCCCHHHHH-----HHHHHHHHHc--CCchhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHH
Confidence 11222211 1233455555 66666778889999999999999999999999999999999999999999999
Q ss_pred HHHHHc--CCCeEEEEeCCcchhhccCEEEEEeCceEEeecC
Q 047171 495 ALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGS 534 (1224)
Q Consensus 495 ~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~ 534 (1224)
.|+++. +|+|+|+|||+++.+..+|++++|++|++++.|+
T Consensus 187 ~l~~~~~~~g~tvii~sH~~~~~~~~~~~~~l~~G~i~~~~~ 228 (233)
T PRK11629 187 LLGELNRLQGTAFLVVTHDLQLAKRMSRQLEMRDGRLTAELS 228 (233)
T ss_pred HHHHHHHhCCCEEEEEeCCHHHHHhhCEEEEEECCEEEEEec
Confidence 998864 4899999999999999889999999999998775
No 436
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-37 Score=346.05 Aligned_cols=202 Identities=31% Similarity=0.565 Sum_probs=167.1
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCC--CCCcccH
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEP--ILFSTSI 407 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~--~lf~~ti 407 (1224)
++||+|.. ++|++++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.++||+|++ .+|+.|+
T Consensus 20 l~~vsl~i---~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv 96 (277)
T PRK13652 20 LNNINFIA---PRNSRIAVIGPNGAGKSTLFRHFNGILKPTSGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSPTV 96 (277)
T ss_pred eeEeEEEE---cCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhheEEEecCcccccccccH
Confidence 44444443 357799999999999999999999999999999999999998777777888999999998 4778899
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
.||+.++.. ..+.++..+ .+.+.++.+ |+.......+..||||||||++|||||+.+|++|||||||++||
T Consensus 97 ~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD 169 (277)
T PRK13652 97 EQDIAFGPINLGLDEETVAH-----RVSSALHML--GLEELRDRVPHHLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLD 169 (277)
T ss_pred HHHHHhHHHHcCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCC
Confidence 999987532 122222211 123344444 44445566778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcC--CCeEEEEeCCcchhh-ccCEEEEEeCceEEeecChHHHHhh
Q 047171 486 AESERIVQEALDQASQ--GRTMIIIAHRLSTIR-KADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~-~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+.+.+.+.+.++++.+ |+|+|++||+++.+. .||+|++|++|++++.|+++++++.
T Consensus 170 ~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~~drv~~l~~G~i~~~g~~~~~~~~ 228 (277)
T PRK13652 170 PQGVKELIDFLNDLPETYGMTVIFSTHQLDLVPEMADYIYVMDKGRIVAYGTVEEIFLQ 228 (277)
T ss_pred HHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCeEEEECCHHHHhcC
Confidence 9999999999988643 899999999999986 5999999999999999999998754
No 437
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=1.3e-37 Score=342.42 Aligned_cols=196 Identities=28% Similarity=0.418 Sum_probs=158.5
Q ss_pred ccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceEEEe-cCCCCC-cccH
Q 047171 993 QMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIALVS-QEPTLF-AGTI 1070 (1224)
Q Consensus 993 ~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~~V~-Qdp~LF-~gTI 1070 (1224)
.++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.++|.++.. ....+|++++|+| |++.+| ..|+
T Consensus 34 ~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~~~~~~~~~~~tv 112 (236)
T cd03267 34 VEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPTSGEVRVAGLVPWK-RRKKFLRRIGVVFGQKTQLWWDLPV 112 (236)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCEEccc-cchhhcccEEEEcCCccccCCCCcH
Confidence 469999999999999999999999999999999999999999999999998755 3356788999997 667676 5799
Q ss_pred HHHHccCCC--CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCCCEEEEeccCCCCC
Q 047171 1071 RQNIVYGKE--VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNPMILLLDEATSALD 1148 (1224)
Q Consensus 1071 reNl~~~~~--~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD 1148 (1224)
+||+.+... ..+.++..+.+. .+.+.+ .+++.+++ ....||||||||++||||++.+|++|||||||++||
T Consensus 113 ~e~l~~~~~~~~~~~~~~~~~~~--~~l~~~-gl~~~~~~----~~~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD 185 (236)
T cd03267 113 IDSFYLLAAIYDLPPARFKKRLD--ELSELL-DLEELLDT----PVRQLSLGQRMRAEIAAALLHEPEILFLDEPTIGLD 185 (236)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHH--HHHHHc-CChhHhcC----ChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCC
Confidence 999976421 223333322211 111111 12222333 345799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcC--CCeEEEEccCchhhhh-cCEEEEEeCCEEEEec
Q 047171 1149 SASENLVQEALEKMMV--GRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQG 1196 (1224)
Q Consensus 1149 ~~te~~I~~~l~~~~~--~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~G 1196 (1224)
+++.+.+.+.|+++.+ ++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 186 ~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g 236 (236)
T cd03267 186 VVAQENIRNFLKEYNRERGTTVLLTSHYMKDIEALARRVLVIDKGRLLYDG 236 (236)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEEecCHHHHHHhCCEEEEEeCCEEEecC
Confidence 9999999999998753 7899999999999866 9999999999998765
No 438
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=2.1e-37 Score=344.83 Aligned_cols=202 Identities=34% Similarity=0.542 Sum_probs=167.0
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCC--------HHHHhcccEEecCCCC
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQ--------LKWLRSQMGLVNQEPI 401 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~--------~~~~r~~i~~v~Q~~~ 401 (1224)
++||+|.. +++++++|+||||||||||+++|+|+++|++|+|.++|+++...+ ...+|+.++||+|++.
T Consensus 19 l~~vs~~i---~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~ 95 (250)
T PRK11264 19 LHGIDLEV---KPGEVVAIIGPSGSGKTTLLRCINLLEQPEAGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQNFN 95 (250)
T ss_pred eccceEEE---cCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccccccchhhHHHHhhhhEEEEecCcc
Confidence 44555544 256799999999999999999999999999999999999986542 3456789999999998
Q ss_pred CCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEE
Q 047171 402 LFS-TSIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLL 477 (1224)
Q Consensus 402 lf~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ilil 477 (1224)
+|+ .|++||+.++.. ....++.. ..+++.++.+ |++......+.+||||||||++|||||+.+|++|||
T Consensus 96 ~~~~~tv~e~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~Gq~qrv~la~al~~~p~lllL 168 (250)
T PRK11264 96 LFPHRTVLENIIEGPVIVKGEPKEEAT-----ARARELLAKV--GLAGKETSYPRRLSGGQQQRVAIARALAMRPEVILF 168 (250)
T ss_pred cCCCCCHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCcchhhCChhhCChHHHHHHHHHHHHhcCCCEEEE
Confidence 886 599999987421 11222111 1234555655 666666778899999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 478 DEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 478 DE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||++||+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 169 DEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 234 (250)
T PRK11264 169 DEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMSFARDVADRAIFMDQGRIVEQGPAKALFAD 234 (250)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999998865 48999999999999976 999999999999999999998654
No 439
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-37 Score=344.63 Aligned_cols=209 Identities=29% Similarity=0.478 Sum_probs=169.4
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCcEEEECCEecCC--CCHHHHh
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD--P---VKGNILLDGHKIKK--LQLKWLR 390 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~--~~~~~~r 390 (1224)
|+++||+|.|++. +++++++|+|+||||||||+++|+|+++ | ++|+|.++|+++.. .+...+|
T Consensus 13 l~i~~l~~~~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 92 (259)
T PRK14274 13 YQINGMNLWYGQHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELR 92 (259)
T ss_pred EEEeeEEEEECCeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHh
Confidence 6677777777532 3577999999999999999999999997 3 69999999999864 3455678
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCCCC---CHHHHHHHHHHhcHHHHHHhc--cccccccccCCCCCCChHHHHHHHHH
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKPGA---SMETVVKAAQAANVHDFIMKL--NDGYETKVGQFGVQLSGGQKQRIAIA 465 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~~---~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGq~qriaiA 465 (1224)
+.+||++|++.+|+.|++||+.++.... ..++..+ .+++.++.+ .+.+.+.....+.+||||||||++||
T Consensus 93 ~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~l~~~~~~LS~Gq~qrv~la 167 (259)
T PRK14274 93 KNIGMVFQKGNPFPQSIFDNVAYGPRIHGTKNKKKLQE-----IVEKSLKDVALWDEVKDRLHTQALSLSGGQQQRLCIA 167 (259)
T ss_pred hceEEEecCCcccccCHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCchhhhhhhhCCcccCCHHHHHHHHHH
Confidence 8999999999999899999998763211 1222111 122233332 11112345678889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 466 RALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 466 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||++.+|++|||||||++||+++...+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 168 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 244 (259)
T PRK14274 168 RALATNPDVLLMDEPTSALDPVSTRKIEELILKLKEKYTIVIVTHNMQQAARVSDQTAFFYMGELVECNDTNKMFSN 244 (259)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEECCHHHHhhC
Confidence 9999999999999999999999999999999988778999999999999875 999999999999999999998754
No 440
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-37 Score=358.02 Aligned_cols=205 Identities=33% Similarity=0.535 Sum_probs=173.8
Q ss_pred cEEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHH----hcccEEecCCCCC
Q 047171 327 EIEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWL----RSQMGLVNQEPIL 402 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~l 402 (1224)
...++|+||..+ ++++++|+||||||||||+++|+|+++|++|+|+++|+++...+...+ ++++|||+|++.+
T Consensus 41 ~~~L~~isl~i~---~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIE---EGEIFVIMGLSGSGKSTMVRLLNRLIEPTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEc---CCCEEEEECCCCchHHHHHHHHHcCCCCCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 357899999975 577999999999999999999999999999999999999988876543 3589999999999
Q ss_pred Ccc-cHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 047171 403 FST-SIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDE 479 (1224)
Q Consensus 403 f~~-ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE 479 (1224)
|+. |++||+.++.. ..+.++.. ..+.+.++.+ |++........+||||||||++|||||+.+|++|||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~~~~~-----~~~~e~L~~~--gL~~~~~~~~~~LSgGq~QRv~LArAL~~~P~iLLLDE 190 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINAEERR-----EKALDALRQV--GLENYAHSYPDELSGGMRQRVGLARALAINPDILLMDE 190 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCChhhhcCcccCCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 965 99999998632 11222111 1233445555 56666677788999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 480 ATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 480 ~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||+||+.+.+.+++.|.++. .|+|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 191 Pts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~~~~~~~Dri~vL~~G~i~~~g~~~~l~~~ 255 (400)
T PRK10070 191 AFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDLDEAMRIGDRIAIMQNGEVVQVGTPDEILNN 255 (400)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHHHHHHhCCEEEEEECCEEEecCCHHHHHhC
Confidence 999999999999999998864 48999999999999865 999999999999999999999765
No 441
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-37 Score=302.88 Aligned_cols=222 Identities=29% Similarity=0.489 Sum_probs=185.1
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCC---------
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSY--------- 1047 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~--------- 1047 (1224)
.++.+|+..+|.+ ..||++|||+.++|+.+.|+|.|||||||+++++.=+..|+.|.|.++|.+|+-.
T Consensus 6 ~l~v~dlHK~~G~---~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~P~~G~I~v~geei~~k~~~~G~l~~ 82 (256)
T COG4598 6 ALEVEDLHKRYGE---HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSAGSIRVNGEEIRLKRDKDGQLKP 82 (256)
T ss_pred ceehhHHHhhccc---chhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcCCCCceEEECCeEEEeeeCCCCCeee
Confidence 5899999999964 4599999999999999999999999999999999999999999999999877322
Q ss_pred ----CHHHHhcceEEEecCCCCCc-ccHHHHHccCCC----CCC-HHHHHHH---HHHHhHHHHHHhcccccccccCCCC
Q 047171 1048 ----NLRKLRSCIALVSQEPTLFA-GTIRQNIVYGKE----VAT-EAEIRKA---AVLANAHEFISSTEDGYDTYCGERG 1114 (1224)
Q Consensus 1048 ----~~~~lR~~i~~V~Qdp~LF~-gTIreNl~~~~~----~~~-deei~~a---l~~a~l~~~I~~lp~gldt~vge~G 1114 (1224)
.++.+|+++++|+|...|.+ .|+.||+.-+ | ..+ +|.+..| +.++++.+ ....-+
T Consensus 83 ad~~q~~r~Rs~L~mVFQ~FNLWsHmtvLeNViEa-PvhVLg~~k~ea~e~Ae~~L~kVGi~e-----------k~~~YP 150 (256)
T COG4598 83 ADKRQLQRLRTRLGMVFQHFNLWSHMTVLENVIEA-PVHVLGVSKAEAIERAEKYLAKVGIAE-----------KADAYP 150 (256)
T ss_pred CCHHHHHHHHHHhhHhhhhcchhHHHHHHHHHHhc-chHhhcCCHHHHHHHHHHHHHHhCchh-----------hhhcCc
Confidence 25568999999999999987 7999998532 2 112 3333333 33444444 333445
Q ss_pred CCCChHHHHHHHHHHHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEE
Q 047171 1115 VQLSGGQKQRIALARAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKV 1192 (1224)
Q Consensus 1115 ~~LSGGQrQRlaLARAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~I 1192 (1224)
..|||||+||.||||||.-+|+++++|||||+|||+---.+.+.++.+. .|+|.++|||.+...++ +.+++.|++|+|
T Consensus 151 ~~LSGGQQQR~aIARaLameP~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~FAR~Vss~v~fLh~G~i 230 (256)
T COG4598 151 AHLSGGQQQRVAIARALAMEPEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGFARDVSSHVIFLHQGKI 230 (256)
T ss_pred cccCchHHHHHHHHHHHhcCCceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhHHHhhhhheEEeeccee
Confidence 6799999999999999999999999999999999999999999998876 68999999999999998 899999999999
Q ss_pred EEecChhHHhhcCCCchhHHH
Q 047171 1193 VEQGTQSSLLSMGNGGAYYSL 1213 (1224)
Q Consensus 1193 ve~Gt~~eLl~~~~~g~y~~l 1213 (1224)
-|+|+|+++..++......++
T Consensus 231 EE~G~P~qvf~nP~S~RlkqF 251 (256)
T COG4598 231 EEEGPPEQVFGNPQSPRLKQF 251 (256)
T ss_pred cccCChHHHhcCCCCHHHHHH
Confidence 999999999987433333333
No 442
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=3e-37 Score=343.66 Aligned_cols=203 Identities=31% Similarity=0.525 Sum_probs=169.1
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCC-------------HHHHhcccEE
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQ-------------LKWLRSQMGL 395 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-------------~~~~r~~i~~ 395 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++..++ ...+|+.++|
T Consensus 15 ~l~~vs~~i~---~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~ 91 (252)
T TIGR03005 15 VLDGLNFSVA---AGEKVALIGPSGSGKSTILRILMTLEPIDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIGM 91 (252)
T ss_pred EEeeeeEEEc---CCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccccccccchhHHHHHhhCeEE
Confidence 3555665543 57799999999999999999999999999999999999987543 2456889999
Q ss_pred ecCCCCCCc-ccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccC
Q 047171 396 VNQEPILFS-TSIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRD 471 (1224)
Q Consensus 396 v~Q~~~lf~-~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~ 471 (1224)
|+|++.+|. .|+.||+.++.. ....++.. ..+.+.++.+ |++....+.+.+||||||||++|||||+.+
T Consensus 92 v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~-----~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~~~ 164 (252)
T TIGR03005 92 VFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAE-----KRAMELLDMV--GLADKADHMPAQLSGGQQQRVAIARALAMR 164 (252)
T ss_pred EecCcccCCCCcHHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhHhhcChhhcCHHHHHHHHHHHHHHcC
Confidence 999998885 699999987521 11221111 1234556665 666667788899999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 472 PKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 472 ~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|+++||||||++||+.+...+.+.|+++. .|+|+|+|||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 165 p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 237 (252)
T TIGR03005 165 PKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMGFAREFADRVCFFDKGRIVEQGKPDEIFRQ 237 (252)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999998864 38999999999999865 999999999999999999998754
No 443
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-37 Score=342.26 Aligned_cols=208 Identities=34% Similarity=0.554 Sum_probs=168.3
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCC--CCHHHH
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKK--LQLKWL 389 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~~~~ 389 (1224)
.|+++||+++|++. +++++++|+||||||||||+++|+|+++| ++|+|.++|+++.. .+...+
T Consensus 3 ~l~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 82 (250)
T PRK14240 3 KISVKDLDLFYGDFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQL 82 (250)
T ss_pred eEEEEEEEEEECCceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHH
Confidence 46666666666532 25679999999999999999999999763 69999999999874 345567
Q ss_pred hcccEEecCCCCCCcccHHHHHhcCCCC--C-CH----HHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHH
Q 047171 390 RSQMGLVNQEPILFSTSIKENILIGKPG--A-SM----ETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRI 462 (1224)
Q Consensus 390 r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qri 462 (1224)
|+.++||+|++.+|+.|+.||+.++... . .. +++.++++..++.+ ++.......+.+||||||||+
T Consensus 83 ~~~i~~~~q~~~~~~~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~l~~~~~~~~~~LS~G~~qrv 155 (250)
T PRK14240 83 RKRVGMVFQQPNPFPMSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWD-------EVKDRLKKSALGLSGGQQQRL 155 (250)
T ss_pred hccEEEEecCCccCcccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCch-------hhHHHHhcCCCCCCHHHHHHH
Confidence 8899999999999989999999886321 1 11 12222222222211 222345677889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 463 AIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 463 aiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 156 ~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiii~sH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 235 (250)
T PRK14240 156 CIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKKDYTIVIVTHNMQQASRISDKTAFFLNGEIVEFGDTVDLFTN 235 (250)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEEeCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988778999999999998866 999999999999999999998653
No 444
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.5e-37 Score=346.00 Aligned_cols=207 Identities=26% Similarity=0.489 Sum_probs=170.0
Q ss_pred EEEEeEEEECCCC-------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccE
Q 047171 328 IEFKDVDFSYPTR-------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMG 394 (1224)
Q Consensus 328 i~~~~v~f~y~~~-------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 394 (1224)
|+++||+++|++. .+|++++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.+|
T Consensus 5 l~~~~l~~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~i~~~~~~~~~~~i~ 84 (277)
T PRK13642 5 LEVENLVFKYEKESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEFEGKVKIDGELLTAENVWNLRRKIG 84 (277)
T ss_pred EEEEEEEEEcCCCCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCCCCEEEECCEECCcCCHHHHhcceE
Confidence 5566666666421 246799999999999999999999999999999999999998777777888999
Q ss_pred EecCCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 395 LVNQEP--ILFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 395 ~v~Q~~--~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
||+|+| .++..|+.|||.++.. ..+.+++.+. +.+.++.+ |++.........||||||||++|||||+.
T Consensus 85 ~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~lAraL~~ 157 (277)
T PRK13642 85 MVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKR-----VDEALLAV--NMLDFKTREPARLSGGQKQRVAVAGIIAL 157 (277)
T ss_pred EEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHH-----HHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHHc
Confidence 999998 3667899999987632 2233332221 12223333 34344556678999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|++|||||||++||+.+.+.+.+.+.++.+ |+|+|+|||+++.+..||+|++|++|++++.|+++++++.
T Consensus 158 ~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 230 (277)
T PRK13642 158 RPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDEAASSDRILVMKAGEIIKEAAPSELFAT 230 (277)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999988753 8999999999999988999999999999999999998754
No 445
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.1e-37 Score=340.27 Aligned_cols=201 Identities=30% Similarity=0.458 Sum_probs=164.9
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH-HhcccEEecCCCCCCcc-c
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW-LRSQMGLVNQEPILFST-S 406 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~~v~Q~~~lf~~-t 406 (1224)
.++|++|... ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+... .+++++|++|++.+|+. |
T Consensus 15 ~l~~vs~~i~---~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (230)
T TIGR03410 15 ILRGVSLEVP---KGEVTCVLGRNGVGKTTLLKTLMGLLPVKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRLT 91 (230)
T ss_pred EecceeeEEC---CCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCCc
Confidence 4566666553 57799999999999999999999999999999999999998777654 46789999999999976 9
Q ss_pred HHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCH
Q 047171 407 IKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDA 486 (1224)
Q Consensus 407 i~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~ 486 (1224)
+.||+.++.......+ .+ ..++.+..+ ++++........+||||||||++|||||+++|+++||||||++||+
T Consensus 92 v~~~l~~~~~~~~~~~-~~-----~~~~~l~~~-~~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~ 164 (230)
T TIGR03410 92 VEENLLTGLAALPRRS-RK-----IPDEIYELF-PVLKEMLGRRGGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQP 164 (230)
T ss_pred HHHHHHHHHHhcCcch-HH-----HHHHHHHHH-HhHHHHhhCChhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCH
Confidence 9999987643211110 00 012222222 1234445677889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHH
Q 047171 487 ESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLM 539 (1224)
Q Consensus 487 ~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~ 539 (1224)
.+...+.+.|.++.+ ++|+|++||+++.+.. ||+|+++++|++++.|+++++.
T Consensus 165 ~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~v~~l~~g~i~~~~~~~~~~ 220 (230)
T TIGR03410 165 SIIKDIGRVIRRLRAEGGMAILLVEQYLDFARELADRYYVMERGRVVASGAGDELD 220 (230)
T ss_pred HHHHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHhCCEEEEEECCEEEEECCHHHcC
Confidence 999999999988653 7999999999999986 9999999999999999998873
No 446
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-37 Score=346.43 Aligned_cols=209 Identities=33% Similarity=0.565 Sum_probs=172.9
Q ss_pred ccEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCC--CCHHH
Q 047171 326 GEIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKK--LQLKW 388 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~--~~~~~ 388 (1224)
+.|+++||+|+|++. +++++++|+|+||||||||+++|+|+++| ++|+|.++|.++.. .+...
T Consensus 24 ~~l~~~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~g~~i~~~~~~~~~ 103 (272)
T PRK14236 24 TALEVRNLNLFYGDKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLDGQNIYDKKVDVAE 103 (272)
T ss_pred cEEEEEEEEEEECCeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEECCEECcccccCHHH
Confidence 458899999998643 35779999999999999999999999984 89999999999864 34567
Q ss_pred HhcccEEecCCCCCCcccHHHHHhcCCC--CC-CH----HHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHH
Q 047171 389 LRSQMGLVNQEPILFSTSIKENILIGKP--GA-SM----ETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQR 461 (1224)
Q Consensus 389 ~r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~-~~----~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qr 461 (1224)
+|+.++|++|++.+|+.|++||+.++.. .. .. +++.++++..++.+ .+.+..+..+.+||||||||
T Consensus 104 ~~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~~~~~~~~~~~~LS~Gq~qr 176 (272)
T PRK14236 104 LRRRVGMVFQRPNPFPKSIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWD-------EVKDRLHENAFGLSGGQQQR 176 (272)
T ss_pred HhccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCh-------hHHHHhhCCcccCCHHHHHH
Confidence 7889999999999998899999987632 11 11 12222333222221 12245677889999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 462 IAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 462 iaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
++|||||+++|+++||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+
T Consensus 177 v~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 256 (272)
T PRK14236 177 LVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKSKYTIVIVTHNMQQAARVSDYTAFMYMGKLVEYGDTDTLFT 256 (272)
T ss_pred HHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCeEEEEeCCHHHHHhhCCEEEEEECCEEEecCCHHHHhc
Confidence 99999999999999999999999999999999999988778999999999999865 99999999999999999999865
Q ss_pred h
Q 047171 541 M 541 (1224)
Q Consensus 541 ~ 541 (1224)
.
T Consensus 257 ~ 257 (272)
T PRK14236 257 S 257 (272)
T ss_pred C
Confidence 3
No 447
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3e-37 Score=334.38 Aligned_cols=183 Identities=27% Similarity=0.474 Sum_probs=151.3
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cHHHHHhcCCC-CCC
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SIKENILIGKP-GAS 419 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~-~~~ 419 (1224)
++++++|+||||||||||+++|+|+++|++|+|.++|.++...+. .++.++|++|++.+|.+ |++||+.++.. ...
T Consensus 23 ~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~~G~i~~~g~~~~~~~~--~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~ 100 (211)
T cd03298 23 QGEITAIVGPSGSGKSTLLNLIAGFETPQSGRVLINGVDVTAAPP--ADRPVSMLFQENNLFAHLTVEQNVGLGLSPGLK 100 (211)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEcCcCCH--hHccEEEEecccccCCCCcHHHHHhcccccccC
Confidence 567999999999999999999999999999999999999976654 35789999999999975 99999987642 111
Q ss_pred -HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHH
Q 047171 420 -METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQ 498 (1224)
Q Consensus 420 -~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~ 498 (1224)
.++. ...+++.++.+ |++........+||||||||++||||++.+|++|||||||++||+++...+.+.|++
T Consensus 101 ~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~ 173 (211)
T cd03298 101 LTAED-----RQAIEVALARV--GLAGLEKRLPGELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLD 173 (211)
T ss_pred ccHHH-----HHHHHHHHHHc--CCHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHH
Confidence 0100 11122333333 444445566679999999999999999999999999999999999999999999988
Q ss_pred Hc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeec
Q 047171 499 AS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESG 533 (1224)
Q Consensus 499 ~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g 533 (1224)
+. .++|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 174 ~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 174 LHAETKMTVLMVTHQPEDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHhcCCEEEEEecCHHHHHhhhCEEEEEECCEEeecC
Confidence 64 38999999999999976 9999999999998754
No 448
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2.4e-37 Score=377.88 Aligned_cols=216 Identities=23% Similarity=0.422 Sum_probs=179.0
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHH-Hhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRK-LRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~-lR~~ 1055 (1224)
-|+++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+... .|++
T Consensus 4 ~i~~~~l~~~~~~---~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~~G~i~~~g~~~~~~~~~~~~~~~ 80 (501)
T PRK10762 4 LLQLKGIDKAFPG---VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGSILYLGKEVTFNGPKSSQEAG 80 (501)
T ss_pred eEEEeeeEEEeCC---eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEECCCCCHHHHHhCC
Confidence 4899999999953 46999999999999999999999999999999999999999999999999987665544 4678
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCCC------CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKEV------ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALA 1128 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~~------~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLA 1128 (1224)
++||||++.+|. .|++||+.++... .+.++.++. +.+.+..+ |+.........+||||||||++||
T Consensus 81 i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la 153 (501)
T PRK10762 81 IGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAE-----ADKLLARL--NLRFSSDKLVGELSIGEQQMVEIA 153 (501)
T ss_pred EEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHH-----HHHHHHHc--CCCCCccCchhhCCHHHHHHHHHH
Confidence 999999998886 5999999876321 122222111 22233332 333333444567999999999999
Q ss_pred HHHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1129 RAVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1129 RAll~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
|||+.+|++|||||||++||+.+.+.+.+.|+++. .++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 154 ~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 229 (501)
T PRK10762 154 KVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLKEIFEICDDVTVFRDGQFIAEREVADLT 229 (501)
T ss_pred HHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEeCCEEEEecCcCcCC
Confidence 99999999999999999999999999999998864 47899999999999866 9999999999999999988764
No 449
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-37 Score=344.57 Aligned_cols=208 Identities=33% Similarity=0.528 Sum_probs=172.2
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCC--CCHHHH
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKK--LQLKWL 389 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~~~ 389 (1224)
.|+++||+++|++. +++++++|+||||||||||+++|+|+++ |++|+|.++|.++.. .+...+
T Consensus 13 ~l~i~nl~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~ 92 (269)
T PRK14259 13 IISLQNVTISYGTFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEV 92 (269)
T ss_pred eEEEEeEEEEECCEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHH
Confidence 58888999888642 3577999999999999999999999987 699999999999863 456678
Q ss_pred hcccEEecCCCCCCcccHHHHHhcCCCC--CC---HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHH
Q 047171 390 RSQMGLVNQEPILFSTSIKENILIGKPG--AS---METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAI 464 (1224)
Q Consensus 390 r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriai 464 (1224)
|+.++||+|++.+|+.|++||+.++... .. .+++.++++..++ ..++++.....+.+||||||||++|
T Consensus 93 ~~~i~~v~q~~~l~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~l~~~~~~~~~~LS~G~~qrl~l 165 (269)
T PRK14259 93 RRRIGMVFQQPNPFPKSIYENIAFGARINGYTGDMDELVERSLRKAAV-------WDECKDKLNESGYSLSGGQQQRLCI 165 (269)
T ss_pred hhceEEEccCCccchhhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCC-------cchhhhhhCCCcccCCHHHHHHHHH
Confidence 8899999999999988999999986431 11 1122222222221 1233445677788999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeC-----------ceEEee
Q 047171 465 ARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQS-----------GRVIES 532 (1224)
Q Consensus 465 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~-----------G~i~~~ 532 (1224)
||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++ |++++.
T Consensus 166 aral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~i~~l~~~~~~~~~~g~~g~~~~~ 245 (269)
T PRK14259 166 ARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKKNFTIVIVTHNMQQAVRVSDMTAFFNAEEVEGGSGGKVGYLVEF 245 (269)
T ss_pred HHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEeccccccccccccceEEEe
Confidence 99999999999999999999999999999999988778999999999999865 999999996 679999
Q ss_pred cChHHHHhh
Q 047171 533 GSHDVLMQM 541 (1224)
Q Consensus 533 g~~~~l~~~ 541 (1224)
|+.+++...
T Consensus 246 ~~~~~~~~~ 254 (269)
T PRK14259 246 NETKKIFNS 254 (269)
T ss_pred CCHHHHHhC
Confidence 999998754
No 450
>cd03250 ABCC_MRP_domain1 Domain 1 of the ABC subfamily C. This family is also known as MRP (mulrtidrug resisitance-associated protein). Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions, such as glutathione, glucuronate, and sulfate.
Probab=100.00 E-value=4e-37 Score=331.39 Aligned_cols=184 Identities=38% Similarity=0.576 Sum_probs=164.4
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcccH
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFSTSI 407 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~ti 407 (1224)
..++|++|+.+ ++++++|+||||||||||+++|+|+++|++|+|.++| +|+|++|+|.+|+.|+
T Consensus 19 ~il~~~s~~i~---~G~~~~i~G~nG~GKSTLl~~i~G~~~~~~G~i~~~g-------------~i~~~~q~~~l~~~t~ 82 (204)
T cd03250 19 FTLKDINLEVP---KGELVAIVGPVGSGKSSLLSALLGELEKLSGSVSVPG-------------SIAYVSQEPWIQNGTI 82 (204)
T ss_pred ceeeeeeEEEC---CCCEEEEECCCCCCHHHHHHHHhCcCCCCCCeEEEcC-------------EEEEEecCchhccCcH
Confidence 35777777764 5679999999999999999999999999999999998 5999999999999999
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHH
Q 047171 408 KENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAE 487 (1224)
Q Consensus 408 ~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~ 487 (1224)
+||+.++.. ...++..++++.+++.+++..+|.|+++.+++++.+||||||||++||||++.+|+++||||||++||++
T Consensus 83 ~enl~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~lS~G~~qrv~laral~~~p~llllDEP~~~LD~~ 161 (204)
T cd03250 83 RENILFGKP-FDEERYEKVIKACALEPDLEILPDGDLTEIGEKGINLSGGQKQRISLARAVYSDADIYLLDDPLSAVDAH 161 (204)
T ss_pred HHHhccCCC-cCHHHHHHHHHHcCcHHHHHhccCcccceecCCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHH
Confidence 999998743 3455667777777888999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH-HHHHH-cCCCeEEEEeCCcchhhccCEEEEEeCce
Q 047171 488 SERIVQE-ALDQA-SQGRTMIIIAHRLSTIRKADLIGVLQSGR 528 (1224)
Q Consensus 488 ~~~~i~~-~l~~~-~~~~t~i~i~H~l~~~~~ad~i~vl~~G~ 528 (1224)
+.+.+.+ .+.+. .+++|+|++||+++.+..||++++|++|+
T Consensus 162 ~~~~l~~~ll~~~~~~~~tvi~~sh~~~~~~~~d~i~~l~~G~ 204 (204)
T cd03250 162 VGRHIFENCILGLLLNNKTRILVTHQLQLLPHADQIVVLDNGR 204 (204)
T ss_pred HHHHHHHHHHHHhccCCCEEEEEeCCHHHHhhCCEEEEEeCCC
Confidence 9888876 45554 35799999999999998899999999985
No 451
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3e-37 Score=351.83 Aligned_cols=206 Identities=31% Similarity=0.492 Sum_probs=168.3
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEec
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVN 397 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 397 (1224)
|+++||+++|++. ++++++||+||||||||||+++|+|+++|++|+|.++|.++... ....|+++|||+
T Consensus 5 i~~~~l~~~~~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~-~~~~~~~i~~v~ 83 (303)
T TIGR01288 5 IDLVGVSKSYGDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLGEPVPSR-ARLARVAIGVVP 83 (303)
T ss_pred EEEEeEEEEeCCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECccc-HHHHhhcEEEEe
Confidence 5666666666532 35679999999999999999999999999999999999998654 355688999999
Q ss_pred CCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 398 QEPILFS-TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 398 Q~~~lf~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
|++.++. .|++||+.+... ..+.++..+. +++.++.+ |++........+||||||||++|||||+.+|++
T Consensus 84 q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~l 156 (303)
T TIGR01288 84 QFDNLDPEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFA--RLESKADVRVALLSGGMKRRLTLARALINDPQL 156 (303)
T ss_pred ccccCCcCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHC--CChhHhcCchhhCCHHHHHHHHHHHHHhcCCCE
Confidence 9998885 599999975211 1222222221 22334433 444455666789999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 475 LLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||||||++||+.+...+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 157 llLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 225 (303)
T TIGR01288 157 LILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLESGRKIAEGRPHALIDE 225 (303)
T ss_pred EEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 99999999999999999999998864 58999999999999976 999999999999999999998654
No 452
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2.4e-37 Score=331.71 Aligned_cols=194 Identities=25% Similarity=0.383 Sum_probs=162.2
Q ss_pred EEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcceE
Q 047171 978 IELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCIA 1057 (1224)
Q Consensus 978 I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i~ 1057 (1224)
|+++|++++|++ .++|+|+||+|++||++||+|+||||||||+++|+|+++|++|+|.+||.++.. ....+|++++
T Consensus 2 l~~~~l~~~~~~---~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~v~~~g~~~~~-~~~~~~~~i~ 77 (200)
T PRK13540 2 LDVIELDFDYHD---QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLNPEKGEILFERQSIKK-DLCTYQKQLC 77 (200)
T ss_pred EEEEEEEEEeCC---eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeeEEECCCcccc-CHHHHHhheE
Confidence 689999999963 459999999999999999999999999999999999999999999999998875 4456889999
Q ss_pred EEecCCCCC-cccHHHHHccCCC-CCCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHccCC
Q 047171 1058 LVSQEPTLF-AGTIRQNIVYGKE-VATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVLKNP 1135 (1224)
Q Consensus 1058 ~V~Qdp~LF-~gTIreNl~~~~~-~~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll~~p 1135 (1224)
|+||++.++ ..|++||+.++.. ...+..+.++++..++ ++..+ ....+||||||||++||||++++|
T Consensus 78 ~~~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~----~~~~~LS~G~~~rv~laral~~~p 146 (200)
T PRK13540 78 FVGHRSGINPYLTLRENCLYDIHFSPGAVGITELCRLFSL-------EHLID----YPCGLLSSGQKRQVALLRLWMSKA 146 (200)
T ss_pred EeccccccCcCCCHHHHHHHHHhcCcchHHHHHHHHHcCC-------chhhh----CChhhcCHHHHHHHHHHHHHhcCC
Confidence 999999886 5799999987531 1122233333333322 22223 333579999999999999999999
Q ss_pred CEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhhcCEEEE
Q 047171 1136 MILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQKADNIVV 1186 (1224)
Q Consensus 1136 ~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~aD~I~v 1186 (1224)
++|||||||++||+.+.+.+.+.|+++. +++|+|++||+.+.+.+||.-++
T Consensus 147 ~~lilDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~d~~~~ 198 (200)
T PRK13540 147 KLWLLDEPLVALDELSLLTIITKIQEHRAKGGAVLLTSHQDLPLNKADYEEY 198 (200)
T ss_pred CEEEEeCCCcccCHHHHHHHHHHHHHHHHcCCEEEEEeCCchhccccchhhc
Confidence 9999999999999999999999999864 57899999999999999997654
No 453
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.1e-37 Score=334.79 Aligned_cols=189 Identities=29% Similarity=0.478 Sum_probs=157.5
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCc-ccH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFS-TSI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~-~ti 407 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++... ...++.++||+|++.+|. .|+
T Consensus 15 ~l~~~~~~i~---~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~--~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 15 VLDDISLHVK---KGEIYGFLGPNGAGKTTTMKIILGLIKPDSGEITFDGKSYQKN--IEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeeeEEEEc---CCcEEEEECCCCCCHHHHHHHHhCCcCCCceEEEECCCcccch--HHHHhhEEEecCCCccCccCcH
Confidence 4566666653 5679999999999999999999999999999999999988654 456778999999998874 699
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
+||+.++.. ..+.+++.++++.. |++......+.+||||||||++||||++.+|++|||||||++||
T Consensus 90 ~e~l~~~~~~~~~~~~~~~~~l~~~-----------~l~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD 158 (208)
T cd03268 90 RENLRLLARLLGIRKKRIDEVLDVV-----------GLKDSAKKKVKGFSLGMKQRLGIALALLGNPDLLILDEPTNGLD 158 (208)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHc-----------CCHHHHhhhHhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCC
Confidence 999987532 12233344443333 34444556678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeec
Q 047171 486 AESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESG 533 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g 533 (1224)
+.+.+.+.+.+.+.. +|+|+|++||+++.+.. ||++++|++|++++.|
T Consensus 159 ~~~~~~l~~~l~~~~~~~~tii~~tH~~~~~~~~~d~v~~l~~g~i~~~g 208 (208)
T cd03268 159 PDGIKELRELILSLRDQGITVLISSHLLSEIQKVADRIGIINKGKLIEEG 208 (208)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEcCCHHHHHHhcCEEEEEECCEEEecC
Confidence 999999999998765 58999999999999975 9999999999998765
No 454
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=2.9e-37 Score=337.17 Aligned_cols=192 Identities=30% Similarity=0.515 Sum_probs=159.3
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH---Hh-cccEEecCCCCCCc
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW---LR-SQMGLVNQEPILFS 404 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r-~~i~~v~Q~~~lf~ 404 (1224)
.++|++|... ++++++|+||||||||||+++|+|+++|++|+|.++|+++..++... +| +.++||+|++.+|+
T Consensus 20 ~l~~isl~i~---~G~~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 96 (221)
T TIGR02211 20 VLKGVSLSIG---KGEIVAIVGSSGSGKSTLLHLLGGLDNPTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLLP 96 (221)
T ss_pred eEeeeEEEEc---CCcEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccCC
Confidence 4566666653 56799999999999999999999999999999999999998776543 33 67999999999886
Q ss_pred -ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 047171 405 -TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEAT 481 (1224)
Q Consensus 405 -~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~t 481 (1224)
.|++||+.++.. ....++.. ..+.++++.+ |++......+.+||||||||++|||||+.+|++|||||||
T Consensus 97 ~~tv~~~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~illlDEPt 169 (221)
T TIGR02211 97 DFTALENVAMPLLIGKKSVKEAK-----ERAYEMLEKV--GLEHRINHRPSELSGGERQRVAIARALVNQPSLVLADEPT 169 (221)
T ss_pred CCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 599999987421 11111111 1223455555 6666677788999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhccCEEEEEeCceEE
Q 047171 482 SALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQSGRVI 530 (1224)
Q Consensus 482 s~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~ 530 (1224)
++||+++...+.+.|.++. .++|+|++||+++.+..+|+|++|++|+++
T Consensus 170 ~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~~~~~~d~v~~l~~G~i~ 220 (221)
T TIGR02211 170 GNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLELAKKLDRVLEMKDGQLF 220 (221)
T ss_pred CcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHhhcCEEEEEeCCEec
Confidence 9999999999999998864 379999999999999889999999999985
No 455
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5e-37 Score=344.79 Aligned_cols=208 Identities=31% Similarity=0.540 Sum_probs=173.1
Q ss_pred cEEEEeEEEECCC--C----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccE
Q 047171 327 EIEFKDVDFSYPT--R----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMG 394 (1224)
Q Consensus 327 ~i~~~~v~f~y~~--~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 394 (1224)
.|+++|++++|++ . +++++++|+||||||||||+++|+|+++|++|+|.++|+++...+...+|+.++
T Consensus 7 ~l~~~nl~~~~~~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~i~ 86 (271)
T PRK13632 7 MIKVENVSFSYPNSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQSGEIKIDGITISKENLKEIRKKIG 86 (271)
T ss_pred EEEEEeEEEEcCCCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEecCcCCHHHHhcceE
Confidence 3677777777742 1 256799999999999999999999999999999999999998777778889999
Q ss_pred EecCCC--CCCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 395 LVNQEP--ILFSTSIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 395 ~v~Q~~--~lf~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
||+|+| .++..|++||+.++... .+.++..+ .+.+.++.+ |++........+||||||||++|||||+.
T Consensus 87 ~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~~ 159 (271)
T PRK13632 87 IIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKD-----IIDDLAKKV--GMEDYLDKEPQNLSGGQKQRVAIASVLAL 159 (271)
T ss_pred EEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHH-----HHHHHHHHc--CCHHHhhCCcccCCHHHHHHHHHHHHHHc
Confidence 999998 35567999999886321 22222211 223445554 55556677788999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQAS-Q-GRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|++|||||||++||+.+.+.+.+.|+++. + ++|+|++||+++.+..||+|++|++|++++.|+.+++.+.
T Consensus 160 ~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 232 (271)
T PRK13632 160 NPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDEAILADKVIVFSEGKLIAQGKPKEILNN 232 (271)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhHHhhCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999998865 3 5899999999999888999999999999999998887653
No 456
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=2.9e-37 Score=351.77 Aligned_cols=203 Identities=24% Similarity=0.442 Sum_probs=172.1
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-c
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-S 406 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-t 406 (1224)
-.++||||..+ +++++||+||||||||||+++|+|+++|++|+|.++|.++.. ....+|+++|||+|++.+|.. |
T Consensus 7 ~~l~~vs~~i~---~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~-~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 7 KAVDGVNFKVR---EGEVFGFLGPNGAGKTTTIRMLTTLLRPTSGTARVAGYDVVR-EPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eEEeeeeEEEc---CCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-CHHHHHhhcEEecCCCCCCCCCc
Confidence 46899999874 577999999999999999999999999999999999999876 345668899999999999876 9
Q ss_pred HHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCC
Q 047171 407 IKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSAL 484 (1224)
Q Consensus 407 i~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~l 484 (1224)
++||+.+... ..+.++.. ..+++.++.+ |++.....+..+||||||||++|||||+.+|++|||||||++|
T Consensus 83 v~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEPt~gL 155 (302)
T TIGR01188 83 GRENLEMMGRLYGLPKDEAE-----ERAEELLELF--ELGEAADRPVGTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGL 155 (302)
T ss_pred HHHHHHHHHHHcCCCHHHHH-----HHHHHHHHHc--CChhHhCCchhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCC
Confidence 9999987421 11222211 1234555555 5555567778899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 485 DAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 485 D~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|+.+.+.+.+.|+++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 156 D~~~~~~l~~~l~~~~~~g~tvi~~sH~~~~~~~~~d~v~~l~~G~i~~~g~~~~l~~~ 214 (302)
T TIGR01188 156 DPRTRRAIWDYIRALKEEGVTILLTTHYMEEADKLCDRIAIIDHGRIIAEGTPEELKRR 214 (302)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEECCHHHHHHh
Confidence 9999999999998864 58999999999999976 999999999999999999998764
No 457
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-37 Score=343.01 Aligned_cols=211 Identities=23% Similarity=0.435 Sum_probs=172.2
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHH-hcccEEe
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWL-RSQMGLV 396 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~-r~~i~~v 396 (1224)
++++||+++|++. .++++++|+||||||||||+++|+|+++|++|+|.++|.++...+.... +..++||
T Consensus 6 l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~ 85 (255)
T PRK11300 6 LSVSGLMMRFGGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPTGGTILLRGQHIEGLPGHQIARMGVVRT 85 (255)
T ss_pred EEEeeEEEEECCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCCcceEEECCEECCCCCHHHHHhcCeEEe
Confidence 5666666666432 3577999999999999999999999999999999999999988775544 4569999
Q ss_pred cCCCCCCcc-cHHHHHhcCCCCCCH----------HHH--HHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHH
Q 047171 397 NQEPILFST-SIKENILIGKPGASM----------ETV--VKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIA 463 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~~~~~----------~~~--~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qria 463 (1224)
+|++.+|.. |++||+.++...... ... ........+.++++.+ |++.....++.+||||||||++
T Consensus 86 ~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~ 163 (255)
T PRK11300 86 FQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERV--GLLEHANRQAGNLAYGQQRRLE 163 (255)
T ss_pred ccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhC--ChhhhhhCChhhCCHHHHHHHH
Confidence 999999986 999999986321000 000 0001112344566666 6777788899999999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-C-CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 464 IARALIRDPKILLLDEATSALDAESERIVQEALDQAS-Q-GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 464 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~-~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
||||++.+|++|||||||++||+.+.+.+.+.|.++. + |+|+|++||+++.+.. ||++++|++|++++.|+.+++..
T Consensus 164 la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 243 (255)
T PRK11300 164 IARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIRN 243 (255)
T ss_pred HHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEecCCHHHHhh
Confidence 9999999999999999999999999999999998864 3 7899999999999966 99999999999999999988754
No 458
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-37 Score=345.34 Aligned_cols=212 Identities=30% Similarity=0.452 Sum_probs=169.9
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
.|+++||+++|++. .++++++|+||||||||||+++|+|+++|++|+|.++|+++.+.+...+++.++|+
T Consensus 11 ~l~i~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~v 90 (265)
T PRK10575 11 TFALRNVSFRVPGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPSEGEILLDAQPLESWSSKAFARKVAYL 90 (265)
T ss_pred eEEEeeEEEEECCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCCCEEEECCEehhhCCHHHHhhheEEe
Confidence 36777777777532 35679999999999999999999999999999999999999888888888899999
Q ss_pred cCCCCCCcc-cHHHHHhcCCCCCC-HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 397 NQEPILFST-SIKENILIGKPGAS-METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 397 ~Q~~~lf~~-ti~~ni~~g~~~~~-~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
+|++.++.. |+.||+.++..... ............+.+.++.+ |++........+||||||||++|||||+.+|++
T Consensus 91 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~p~l 168 (265)
T PRK10575 91 PQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLV--GLKPLAHRLVDSLSGGERQRAWIAMLVAQDSRC 168 (265)
T ss_pred ccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHc--CCHHHhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 999877655 99999998632110 00000000011123334443 444445666779999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 475 LLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
|||||||++||+.+.+.+.+.|.++. .|+|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 169 llLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~~i~~~~d~i~~l~~G~i~~~~~~~~~~~ 237 (265)
T PRK10575 169 LLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDINMAARYCDYLVALRGGEMIAQGTPAELMR 237 (265)
T ss_pred EEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCeEEEecCHHHhcC
Confidence 99999999999999999999998864 37999999999999965 99999999999999999988754
No 459
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=3.4e-37 Score=343.97 Aligned_cols=208 Identities=33% Similarity=0.564 Sum_probs=170.4
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC------------
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL------------ 384 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~------------ 384 (1224)
.++++||++.|++. +++++++|+|+||||||||+++|+|+++|++|+|.++|.++...
T Consensus 5 ~l~~~~l~~~~~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~ 84 (257)
T PRK10619 5 KLNVIDLHKRYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPSEGSIVVNGQTINLVRDKDGQLKVADK 84 (257)
T ss_pred cEEEeeeEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeEEEECCEEcccccccccccccccc
Confidence 46666666666532 35779999999999999999999999999999999999988642
Q ss_pred -CHHHHhcccEEecCCCCCCcc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhccccccccc-cCCCCCCChHH
Q 047171 385 -QLKWLRSQMGLVNQEPILFST-SIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETKV-GQFGVQLSGGQ 458 (1224)
Q Consensus 385 -~~~~~r~~i~~v~Q~~~lf~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~-~~~g~~LSgGq 458 (1224)
....+++.++||+|++.+|+. |++||+.++.. ....++. ...+.+.++.+ |+.... ...+.+|||||
T Consensus 85 ~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~~LS~G~ 157 (257)
T PRK10619 85 NQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEA-----RERAVKYLAKV--GIDERAQGKYPVHLSGGQ 157 (257)
T ss_pred hHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHH-----HHHHHHHHHHc--CCChhhhhCCcccCCHHH
Confidence 134567899999999999975 99999987421 1111111 11234455555 555543 67789999999
Q ss_pred HHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChH
Q 047171 459 KQRIAIARALIRDPKILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHD 536 (1224)
Q Consensus 459 ~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~ 536 (1224)
|||++|||||+++|+++||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.|+++
T Consensus 158 ~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~ 237 (257)
T PRK10619 158 QQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGAPE 237 (257)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHH
Confidence 999999999999999999999999999999999999998875 48999999999999986 9999999999999999999
Q ss_pred HHHhh
Q 047171 537 VLMQM 541 (1224)
Q Consensus 537 ~l~~~ 541 (1224)
++.+.
T Consensus 238 ~~~~~ 242 (257)
T PRK10619 238 QLFGN 242 (257)
T ss_pred HhhhC
Confidence 98754
No 460
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-37 Score=343.29 Aligned_cols=209 Identities=32% Similarity=0.512 Sum_probs=167.0
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCcEEEECCEecCCC--CHHHHh
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD--P---VKGNILLDGHKIKKL--QLKWLR 390 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~~--~~~~~r 390 (1224)
++++||+++|++. .++++++|+||||||||||+++|+|+++ | ++|+|.++|+++... +...+|
T Consensus 6 l~~~~l~~~~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~ 85 (252)
T PRK14239 6 LQVSDLSVYYNKKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLR 85 (252)
T ss_pred EEEEeeEEEECCeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhh
Confidence 5666666666432 2567999999999999999999999954 6 599999999998643 345678
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCC--CCC-HHHHHHHHHHhcHHHHHHhcc--ccccccccCCCCCCChHHHHHHHHH
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKP--GAS-METVVKAAQAANVHDFIMKLN--DGYETKVGQFGVQLSGGQKQRIAIA 465 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~~-~~~~~~~~~~~~~~~~i~~l~--~g~~t~~~~~g~~LSgGq~qriaiA 465 (1224)
+.++||+|++.+|+.|++||+.++.. ... .++..+ .+.+.++.+. .++.+..+..+.+||||||||++||
T Consensus 86 ~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la 160 (252)
T PRK14239 86 KEIGMVFQQPNPFPMSIYENVVYGLRLKGIKDKQVLDE-----AVEKSLKGASIWDEVKDRLHDSALGLSGGQQQRVCIA 160 (252)
T ss_pred hcEEEEecCCccCcCcHHHHHHHHHHHcCCCcHHHHHH-----HHHHHHHHcCCchhHHHHHhcCcccCCHHHHHHHHHH
Confidence 89999999999999999999987531 111 111111 1122333331 1123446778899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 466 RALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 466 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||++.+|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 161 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 237 (252)
T PRK14239 161 RVLATSPKIILLDEPTSALDPISAGKIEETLLGLKDDYTMLLVTRSMQQASRISDRTGFFLDGDLIEYNDTKQMFMN 237 (252)
T ss_pred HHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhhCCeEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999987767999999999998865 999999999999999999998764
No 461
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=3e-37 Score=353.21 Aligned_cols=203 Identities=31% Similarity=0.465 Sum_probs=168.1
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH---HhcccEEecCCC--CCC
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW---LRSQMGLVNQEP--ILF 403 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r~~i~~v~Q~~--~lf 403 (1224)
.++||||... +++++||+|+||||||||+++|+|+++|++|+|.++|+++.+++... +|++|+||+|+| .++
T Consensus 36 ~l~~vsl~i~---~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~~l~ 112 (331)
T PRK15079 36 AVDGVTLRLY---EGETLGVVGESGCGKSTFARAIIGLVKATDGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLASLN 112 (331)
T ss_pred EEeeEEEEEc---CCCEEEEECCCCCCHHHHHHHHHCCCCCCCcEEEECCEECCcCCHHHHHHHhCceEEEecCchhhcC
Confidence 4556666543 46799999999999999999999999999999999999998887543 577899999998 477
Q ss_pred c-ccHHHHHhcCC----CCCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCCCEEEE
Q 047171 404 S-TSIKENILIGK----PGASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDPKILLL 477 (1224)
Q Consensus 404 ~-~ti~~ni~~g~----~~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~~ilil 477 (1224)
+ .||.|||.++. +..+.++..+. +.+.++.+ |++ ......+.+|||||||||+|||||+.+|++||+
T Consensus 113 p~~tv~~~i~~~l~~~~~~~~~~~~~~~-----~~~~l~~v--gl~~~~~~~~p~~LSgG~~QRv~iArAL~~~P~llil 185 (331)
T PRK15079 113 PRMTIGEIIAEPLRTYHPKLSRQEVKDR-----VKAMMLKV--GLLPNLINRYPHEFSGGQCQRIGIARALILEPKLIIC 185 (331)
T ss_pred CCCCHHHHHHHHHHHhccCCCHHHHHHH-----HHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 4 69999997642 12233333222 23444544 442 345778899999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 478 DEATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 478 DE~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||++||+.++..+.+.|+++.+ |.|+|+|||+++.+.. ||+|+||++|+|++.|+.+++.+.
T Consensus 186 DEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~~~~~~~dri~vl~~G~ive~g~~~~i~~~ 252 (331)
T PRK15079 186 DEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLAVVKHISDRVLVMYLGHAVELGTYDEVYHN 252 (331)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHcC
Confidence 999999999999999999988753 8999999999999986 999999999999999999999875
No 462
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=3.8e-37 Score=344.78 Aligned_cols=203 Identities=30% Similarity=0.473 Sum_probs=166.8
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH---HhcccEEecCCCC--CC
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW---LRSQMGLVNQEPI--LF 403 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~---~r~~i~~v~Q~~~--lf 403 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+... +|+.|+||+|++. ++
T Consensus 26 il~~isl~i~---~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~~ 102 (265)
T TIGR02769 26 VLTNVSLSIE---EGETVGLLGRSGCGKSTLARLLLGLEKPAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAVN 102 (265)
T ss_pred EeeCceeEEc---CCCEEEEECCCCCCHHHHHHHHhCCCCCCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhhcC
Confidence 4566666543 57799999999999999999999999999999999999998776543 5778999999983 44
Q ss_pred -cccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 047171 404 -STSIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDPKILLLD 478 (1224)
Q Consensus 404 -~~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~~ililD 478 (1224)
..|++||+.++.. ....++ ....+++.++.+ |++ ......+.+||||||||++|||||+.+|++||||
T Consensus 103 ~~~tv~~~l~~~~~~~~~~~~~~-----~~~~~~~~l~~~--gl~~~~~~~~~~~LSgGe~qrv~laral~~~p~illLD 175 (265)
T TIGR02769 103 PRMTVRQIIGEPLRHLTSLDESE-----QKARIAELLDMV--GLRSEDADKLPRQLSGGQLQRINIARALAVKPKLIVLD 175 (265)
T ss_pred CCCCHHHHHHHHHHHhcCCCHHH-----HHHHHHHHHHHc--CCChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 3699999975421 111111 112234556665 564 4567788999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 479 EATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 479 E~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||++||+.+...+.+.|+++.+ |+|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 176 EPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 241 (265)
T TIGR02769 176 EAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLRLVQSFCQRVAVMDKGQIVEECDVAQLLSF 241 (265)
T ss_pred CCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHHHHHHHhcEEEEEeCCEEEEECCHHHHcCC
Confidence 99999999999999999988653 8999999999999975 999999999999999999999763
No 463
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.3e-37 Score=347.89 Aligned_cols=209 Identities=28% Similarity=0.474 Sum_probs=169.6
Q ss_pred ccEEEEeEEEECCCC---------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCC----C-C
Q 047171 326 GEIEFKDVDFSYPTR---------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKK----L-Q 385 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~---------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~----~-~ 385 (1224)
+.|+++|++++|++. .+++++||+||||||||||+++|+|+++|++|+|.++|.++.. . +
T Consensus 5 ~~l~i~nl~~~~~~~~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~ 84 (289)
T PRK13645 5 KDIILDNVSYTYAKKTPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISETGQTIVGDYAIPANLKKIKE 84 (289)
T ss_pred ceEEEEEEEEEeCCCCccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccccccccc
Confidence 467788888887542 2456999999999999999999999999999999999999852 2 3
Q ss_pred HHHHhcccEEecCCC--CCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHH
Q 047171 386 LKWLRSQMGLVNQEP--ILFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQ 460 (1224)
Q Consensus 386 ~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~q 460 (1224)
...+|+.|+||+|+| .+|+.|++||+.++.. ....++..+. +.+.++.+ |+. ......+.+|||||||
T Consensus 85 ~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~~LS~Gq~q 157 (289)
T PRK13645 85 VKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKK-----VPELLKLV--QLPEDYVKRSPFELSGGQKR 157 (289)
T ss_pred HHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhHhcCChhhCCHHHHH
Confidence 456788999999998 4677899999988642 1222222221 22333333 342 3456778899999999
Q ss_pred HHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHH
Q 047171 461 RIAIARALIRDPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDV 537 (1224)
Q Consensus 461 riaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~ 537 (1224)
|++|||||+.+|++|||||||++||+.+.+.+.+.|.++. .|+|+|+|||+++.+.. ||+|++|++|++++.|++++
T Consensus 158 rv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~g~~~~ 237 (289)
T PRK13645 158 RVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMDQVLRIADEVIVMHEGKVISIGSPFE 237 (289)
T ss_pred HHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEECCEEEEeCCHHH
Confidence 9999999999999999999999999999999999998864 38999999999999865 99999999999999999988
Q ss_pred HHhh
Q 047171 538 LMQM 541 (1224)
Q Consensus 538 l~~~ 541 (1224)
+...
T Consensus 238 ~~~~ 241 (289)
T PRK13645 238 IFSN 241 (289)
T ss_pred HhcC
Confidence 7653
No 464
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-37 Score=343.16 Aligned_cols=207 Identities=34% Similarity=0.519 Sum_probs=167.4
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCC--CCHHHHh
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKK--LQLKWLR 390 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~~~r 390 (1224)
|+++||+|+|++. +++++++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+...+|
T Consensus 5 l~~~~l~~~~~~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g~~~~~~~~~~~~~~ 84 (251)
T PRK14251 5 ISAKDVHLSYGNYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEGQNIYGSKMDLVELR 84 (251)
T ss_pred EEEEeeEEEECCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECCEEcccccchHHHhh
Confidence 5666666666432 2567999999999999999999999997 489999999999854 3445678
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCCC--CC-HHHHHHHHHHhcHHHHHHhccccc----cccccCCCCCCChHHHHHHH
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKPG--AS-METVVKAAQAANVHDFIMKLNDGY----ETKVGQFGVQLSGGQKQRIA 463 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~~-~~~~~~~~~~~~~~~~i~~l~~g~----~t~~~~~g~~LSgGq~qria 463 (1224)
+.++||+|++.+|+.|++||+.++... .. .+...+ .+.+.++.+ |+ .......+.+||||||||++
T Consensus 85 ~~i~~~~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~qr~~ 157 (251)
T PRK14251 85 KEVGMVFQQPTPFPFSVYDNVAYGLKIAGVKDKELIDQ-----RVEESLKQA--AIWKETKDNLDRNAQAFSGGQQQRIC 157 (251)
T ss_pred ccEEEEecCCccCCCcHHHHHHHHHHHcCCCCHHHHHH-----HHHHHHHHc--CCCcchHHHhccChhhCCHHHHHHHH
Confidence 899999999999999999999876321 11 111111 122233332 22 12346678899999999999
Q ss_pred HHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 464 IARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 464 iARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||++++|+++||||||++||+++...+.+.|+++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 158 laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14251 158 IARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKHQYTFIMVTHNLQQAGRISDQTAFLMNGDLIEAGPTEEMFIA 236 (251)
T ss_pred HHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHcCCeEEEEECCHHHHHhhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 999999999999999999999999999999999988778999999999999876 999999999999999999998754
No 465
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.6e-37 Score=345.95 Aligned_cols=202 Identities=30% Similarity=0.519 Sum_probs=166.3
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC----CHHHHhcccEEecCCC--CCC
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL----QLKWLRSQMGLVNQEP--ILF 403 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~r~~i~~v~Q~~--~lf 403 (1224)
++|++|.. +++++++|+||||||||||+++|+|+++|++|+|.++|+++... +...+|+.|+|++|++ .+|
T Consensus 23 l~~is~~i---~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 99 (280)
T PRK13649 23 LFDVNLTI---EDGSYTAFIGHTGSGKSTIMQLLNGLHVPTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQLF 99 (280)
T ss_pred eeeeEEEE---cCCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccccccccCHHHHHhheEEEeeChhhhhc
Confidence 44455444 24679999999999999999999999999999999999998754 3466788999999998 678
Q ss_pred cccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCC
Q 047171 404 STSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEA 480 (1224)
Q Consensus 404 ~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ 480 (1224)
+.|++||+.++.. ..+.++..+. +.+.++.+ |++ ........+||||||||++|||||+.+|++||||||
T Consensus 100 ~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~~l~~~--~l~~~~~~~~~~~LSgG~~qrv~la~al~~~p~lllLDEP 172 (280)
T PRK13649 100 EETVLKDVAFGPQNFGVSQEEAEAL-----AREKLALV--GISESLFEKNPFELSGGQMRRVAIAGILAMEPKILVLDEP 172 (280)
T ss_pred cccHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 8899999987532 1223332221 23445544 554 345777889999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 481 TSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 481 ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|++||+++.+.+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 173 t~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 235 (280)
T PRK13649 173 TAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMDDVANYADFVYVLEKGKLVLSGKPKDIFQD 235 (280)
T ss_pred cccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999998864 48999999999999865 999999999999999999988653
No 466
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-37 Score=336.68 Aligned_cols=206 Identities=32% Similarity=0.533 Sum_probs=166.9
Q ss_pred EEEEeEEEECCCC--------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCC
Q 047171 328 IEFKDVDFSYPTR--------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQE 399 (1224)
Q Consensus 328 i~~~~v~f~y~~~--------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~ 399 (1224)
|+++||+++|++. .++++++|+||||||||||+++|+|+++|++|+|.++|+++...+.. ++.++|++|+
T Consensus 2 l~~~~l~~~~~~~~~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~--~~~i~~~~q~ 79 (232)
T PRK10771 2 LKLTDITWLYHHLPMRFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPASGSLTLNGQDHTTTPPS--RRPVSMLFQE 79 (232)
T ss_pred eEEEEEEEEECCccceeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCeecCcCChh--hccEEEEecc
Confidence 4566666666432 25679999999999999999999999999999999999998766542 5689999999
Q ss_pred CCCCcc-cHHHHHhcCC-CCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEE
Q 047171 400 PILFST-SIKENILIGK-PGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLL 477 (1224)
Q Consensus 400 ~~lf~~-ti~~ni~~g~-~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ilil 477 (1224)
+.+|.+ |+.||+.++. +.....+ .....+.+.++.+ |++..+......||||||||++||||++++|+++||
T Consensus 80 ~~~~~~~tv~e~l~~~~~~~~~~~~----~~~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~lllL 153 (232)
T PRK10771 80 NNLFSHLTVAQNIGLGLNPGLKLNA----AQREKLHAIARQM--GIEDLLARLPGQLSGGQRQRVALARCLVREQPILLL 153 (232)
T ss_pred cccccCCcHHHHHhcccccccCCCH----HHHHHHHHHHHHc--CcHHHHhCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 999875 9999998753 1111000 0111223344444 455556666779999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 478 DEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 478 DE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||++||+.+.+.+.+.|.++. .|+|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 154 DEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~g~i~~~g~~~~~~~~ 220 (232)
T PRK10771 154 DEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLEDAARIAPRSLVVADGRIAWDGPTDELLSG 220 (232)
T ss_pred eCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999998864 38899999999999876 999999999999999999988754
No 467
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.2e-37 Score=344.66 Aligned_cols=202 Identities=29% Similarity=0.490 Sum_probs=168.0
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCC-HHHHhcccEEecCCCC--CCccc
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQ-LKWLRSQMGLVNQEPI--LFSTS 406 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~r~~i~~v~Q~~~--lf~~t 406 (1224)
++||+|+. ++++++||+||||||||||+++|+|+++|++|+|.++|.++...+ ...+++.+|||+|+|. +++.|
T Consensus 18 l~~vsl~i---~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~t 94 (274)
T PRK13644 18 LENINLVI---KKGEYIGIIGKNGSGKSTLALHLNGLLRPQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVGRT 94 (274)
T ss_pred eeeeEEEE---eCCCEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEECCccccHHHHHhheEEEEEChhhhcccch
Confidence 44444443 257799999999999999999999999999999999999998765 4567889999999985 56789
Q ss_pred HHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCC
Q 047171 407 IKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSAL 484 (1224)
Q Consensus 407 i~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~l 484 (1224)
+.|||.++... .+.++..+ .+.+.++.+ |++......+..||||||||++|||||+.+|++|||||||++|
T Consensus 95 v~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~gL 167 (274)
T PRK13644 95 VEEDLAFGPENLCLPPIEIRK-----RVDRALAEI--GLEKYRHRSPKTLSGGQGQCVALAGILTMEPECLIFDEVTSML 167 (274)
T ss_pred HHHHHHhhHHHcCCCHHHHHH-----HHHHHHHHC--CCHHHhcCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccC
Confidence 99999886421 22222221 123344454 5666667788999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 485 DAESERIVQEALDQAS-QGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 485 D~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|+.+...+.+.++++. +|+|+|++||+++.+..||+|++|++|++++.|+.+++...
T Consensus 168 D~~~~~~l~~~l~~l~~~g~til~~tH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 225 (274)
T PRK13644 168 DPDSGIAVLERIKKLHEKGKTIVYITHNLEELHDADRIIVMDRGKIVLEGEPENVLSD 225 (274)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999998764 58999999999999988999999999999999999987653
No 468
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-37 Score=342.12 Aligned_cols=210 Identities=30% Similarity=0.506 Sum_probs=170.6
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCCCC--HHHH
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKKLQ--LKWL 389 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~--~~~~ 389 (1224)
.|+++|+++.|++. ++++++||+|+||||||||+++|+|+++| ++|+|.++|+++...+ ...+
T Consensus 12 ~l~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 91 (258)
T PRK14268 12 QIKVENLNLWYGEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVEL 91 (258)
T ss_pred eEEEeeeEEEeCCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHH
Confidence 47788888887542 35779999999999999999999999985 8999999999986532 3456
Q ss_pred hcccEEecCCCCCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccc--cccccccCCCCCCChHHHHHHHHH
Q 047171 390 RSQMGLVNQEPILFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLND--GYETKVGQFGVQLSGGQKQRIAIA 465 (1224)
Q Consensus 390 r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~--g~~t~~~~~g~~LSgGq~qriaiA 465 (1224)
|+.++||+|++.+|+.|++||+.++.. ..+.++..+ .+.+.++.+.. .........+.+||||||||++||
T Consensus 92 ~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LSgG~~qrv~la 166 (258)
T PRK14268 92 RKNVGMVFQKPNPFPMSIYDNVAYGPRIHGANKKDLDG-----VVENALRSAALWDETSDRLKSPALSLSGGQQQRLCIA 166 (258)
T ss_pred hhhEEEEecCCccCcccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHcCCCcchhhhhcCChhhCCHHHHHHHHHH
Confidence 788999999999999999999987532 122222111 12233333311 112345677889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 466 RALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 466 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||+.+|++|||||||++||+++...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 167 ral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 243 (258)
T PRK14268 167 RTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKKDYTIVIVTHNMQQAARISDYTGFFLMGELIEFGQTRQIFHN 243 (258)
T ss_pred HHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhhCCEEEEEECCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 9999999999999999999999999999999987778999999999999865 999999999999999999998754
No 469
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=3.7e-37 Score=338.24 Aligned_cols=196 Identities=37% Similarity=0.569 Sum_probs=158.4
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCH---HHHhcccEEecCCC--CCC
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQL---KWLRSQMGLVNQEP--ILF 403 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~---~~~r~~i~~v~Q~~--~lf 403 (1224)
.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+. ..+|++++|++|++ .++
T Consensus 20 ~l~~vs~~i~---~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 20 ALDDVSFSIK---KGETLGLVGESGSGKSTLARAILGLLKPTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eecCceeEEc---CCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 3555555542 467999999999999999999999999999999999999987763 56788999999999 344
Q ss_pred -cccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEe
Q 047171 404 -STSIKENILIGKPG---ASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDPKILLLD 478 (1224)
Q Consensus 404 -~~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~~ililD 478 (1224)
..|++||+.++... ...++..+.+ +++.++.+ |+. ......+.+||||||||++|||||+.+|++||||
T Consensus 97 ~~~tv~~nl~~~~~~~~~~~~~~~~~~~----~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllLD 170 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGKLSKKEARKEA----VLLLLVGV--GLPEEVLNRYPHELSGGQRQRVAIARALALNPKLLIAD 170 (228)
T ss_pred CcCCHHHHHHHHHHhccCCcHHHHHHHH----HHHHHHHC--CCChhHhhCCchhcCHHHHHHHHHHHHHhcCCCEEEec
Confidence 46999999864211 1111111110 12445555 453 4567788999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeec
Q 047171 479 EATSALDAESERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESG 533 (1224)
Q Consensus 479 E~ts~lD~~~~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g 533 (1224)
|||++||+++.+.+.+.|.++.+ |+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 171 EPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~~~~~~d~i~~l~~G~i~~~g 228 (228)
T cd03257 171 EPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLGVVAKIADRVAVMYAGKIVEEG 228 (228)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEeCCEEEecC
Confidence 99999999999999999988753 8999999999999975 9999999999998765
No 470
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=5.9e-37 Score=315.19 Aligned_cols=203 Identities=28% Similarity=0.440 Sum_probs=172.3
Q ss_pred EeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHH-HhcccEEecCCCCCCcc-cHH
Q 047171 331 KDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKW-LRSQMGLVNQEPILFST-SIK 408 (1224)
Q Consensus 331 ~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~-~r~~i~~v~Q~~~lf~~-ti~ 408 (1224)
++|||.- +.+++++|+|+||+||||+++.|+|+.+|.+|+|.++|+|+...+++. .|..|+||||.-.+|+. ||+
T Consensus 20 ~gvsl~v---~~Geiv~llG~NGaGKTTlLkti~Gl~~~~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~LTVe 96 (237)
T COG0410 20 RGVSLEV---ERGEIVALLGRNGAGKTTLLKTIMGLVRPRSGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPRLTVE 96 (237)
T ss_pred eeeeeEE---cCCCEEEEECCCCCCHHHHHHHHhCCCCCCCeeEEECCeecCCCCHHHHHhCCeEeCcccccchhhCcHH
Confidence 4444443 367899999999999999999999999999999999999999998766 57789999999999976 999
Q ss_pred HHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHH
Q 047171 409 ENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAES 488 (1224)
Q Consensus 409 ~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~ 488 (1224)
||+.+|......++ ......++..+-+|. +....+.++.+|||||||.+||||||+.+|++|+|||||.+|-|.-
T Consensus 97 ENL~~g~~~~~~~~----~~~~~~e~v~~lFP~-Lker~~~~aG~LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~i 171 (237)
T COG0410 97 ENLLLGAYARRDKE----AQERDLEEVYELFPR-LKERRNQRAGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKI 171 (237)
T ss_pred HHHhhhhhcccccc----cccccHHHHHHHChh-HHHHhcCcccCCChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHH
Confidence 99998843222111 111113444556674 6677889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHcC--CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 489 ERIVQEALDQASQ--GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 489 ~~~i~~~l~~~~~--~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
.+.|.+.++++++ |.|+++|.++...... |||.+||++|+|+.+|+.+||.+.
T Consensus 172 v~~I~~~i~~l~~~~g~tIlLVEQn~~~Al~iaDr~yvle~Griv~~G~~~eL~~~ 227 (237)
T COG0410 172 VEEIFEAIKELRKEGGMTILLVEQNARFALEIADRGYVLENGRIVLSGTAAELLAD 227 (237)
T ss_pred HHHHHHHHHHHHHcCCcEEEEEeccHHHHHHhhCEEEEEeCCEEEEecCHHHHhcC
Confidence 9999999998874 6799999999998865 999999999999999999999875
No 471
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-37 Score=337.80 Aligned_cols=193 Identities=31% Similarity=0.510 Sum_probs=160.0
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCc-cc
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFS-TS 406 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~-~t 406 (1224)
..++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++.. .++.++||+|++.+|+ .|
T Consensus 18 ~il~~vs~~i~---~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~-----~~~~i~~v~q~~~~~~~~t 89 (220)
T cd03293 18 TALEDISLSVE---EGEFVALVGPSGCGKSTLLRIIAGLERPTSGEVLVDGEPVTG-----PGPDRGYVFQQDALLPWLT 89 (220)
T ss_pred EEEeceeEEEe---CCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECcc-----ccCcEEEEecccccccCCC
Confidence 35677777653 567999999999999999999999999999999999998863 3578999999999887 59
Q ss_pred HHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCC
Q 047171 407 IKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSAL 484 (1224)
Q Consensus 407 i~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~l 484 (1224)
++||+.++.. ....++. ...+.+.++.+ |++........+||||||||++|||||+.+|+++||||||++|
T Consensus 90 v~e~l~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~la~al~~~p~lllLDEPt~~L 162 (220)
T cd03293 90 VLDNVALGLELQGVPKAEA-----RERAEELLELV--GLSGFENAYPHQLSGGMRQRVALARALAVDPDVLLLDEPFSAL 162 (220)
T ss_pred HHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CChhhhhCCcccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 9999987532 1111111 11234455555 5655667777899999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEe--CceEEeecCh
Q 047171 485 DAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQ--SGRVIESGSH 535 (1224)
Q Consensus 485 D~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~--~G~i~~~g~~ 535 (1224)
|+.+...+.+.|+++. .|+|+|+|||+++.+.. ||+|++|+ +|+++++++.
T Consensus 163 D~~~~~~~~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 163 DALTREQLQEELLDIWRETGKTVLLVTHDIDEAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEecCHHHHHHhCCEEEEEECCCCEEEEEEEe
Confidence 9999999999998863 38999999999998865 99999999 7999998764
No 472
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.1e-37 Score=344.78 Aligned_cols=204 Identities=31% Similarity=0.513 Sum_probs=170.3
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHH----hcccEEecCCCCCC
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWL----RSQMGLVNQEPILF 403 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~----r~~i~~v~Q~~~lf 403 (1224)
..++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|.++.+.+...+ +++++|++|++.+|
T Consensus 38 ~il~~is~~i~---~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 114 (269)
T cd03294 38 VGVNDVSLDVR---EGEIFVIMGLSGSGKSTLLRCINRLIEPTSGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFALL 114 (269)
T ss_pred eEeeeeEEEEc---CCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEccccChhhhhhhhcCcEEEEecCcccC
Confidence 46899999885 567999999999999999999999999999999999999987765443 45799999999988
Q ss_pred c-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCC
Q 047171 404 S-TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEA 480 (1224)
Q Consensus 404 ~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ 480 (1224)
+ .|++||+.++.. ....++.. ..+.+.++.+ |++........+||||||||++|||||+.+|+|||||||
T Consensus 115 ~~~tv~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LS~Gq~qrv~lAral~~~p~illLDEP 187 (269)
T cd03294 115 PHRTVLENVAFGLEVQGVPRAERE-----ERAAEALELV--GLEGWEHKYPDELSGGMQQRVGLARALAVDPDILLMDEA 187 (269)
T ss_pred CCCcHHHHHHHHHHhcCCCHHHHH-----HHHHHHHHHc--CCHhHhhCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 5 599999987532 11111111 1223444544 555556677789999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 481 TSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 481 ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|++||+.+.+.+.+.|.++. .|+|+|++||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 188 t~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 251 (269)
T cd03294 188 FSALDPLIRREMQDELLRLQAELQKTIVFITHDLDEALRLGDRIAIMKDGRLVQVGTPEEILTN 251 (269)
T ss_pred CccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999998864 37999999999999865 999999999999999999999764
No 473
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.4e-37 Score=345.07 Aligned_cols=210 Identities=30% Similarity=0.473 Sum_probs=170.3
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCC--CCHHHH
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKK--LQLKWL 389 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~~~ 389 (1224)
-|+++|++++|++. .++++++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+...+
T Consensus 21 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~ 100 (268)
T PRK14248 21 ILEVKDLSIYYGEKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEGLNILDSNINVVNL 100 (268)
T ss_pred eEEEEEEEEEeCCceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECCEEcccccccHHHH
Confidence 48899999999743 2567999999999999999999999864 799999999999865 334567
Q ss_pred hcccEEecCCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhcc--ccccccccCCCCCCChHHHHHHHH
Q 047171 390 RSQMGLVNQEPILFSTSIKENILIGKPG--A-SMETVVKAAQAANVHDFIMKLN--DGYETKVGQFGVQLSGGQKQRIAI 464 (1224)
Q Consensus 390 r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l~--~g~~t~~~~~g~~LSgGq~qriai 464 (1224)
+++++|++|++.+|+.|++||+.++... . ......+. +.+.+..+. .++....+..+.+||||||||++|
T Consensus 101 ~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~-----~~~~l~~~~l~~~~~~~~~~~~~~LSgGq~qrl~l 175 (268)
T PRK14248 101 RREIGMVFQKPNPFPKSIYNNITHALKYAGERRKSVLDEI-----VEESLTKAALWDEVKDRLHSSALSLSGGQQQRLCI 175 (268)
T ss_pred hccEEEEecCCccCcccHHHHHHHHHHhcCCCcHHHHHHH-----HHHHHHHcCCCcchHHHHhcCcccCCHHHHHHHHH
Confidence 8899999999999999999999875321 1 11111111 112222221 111234567789999999999999
Q ss_pred HHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 465 ARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 465 ARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 176 aral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~v~~l~~G~i~~~~~~~~~~~~ 253 (268)
T PRK14248 176 ARTLAMKPAVLLLDEPASALDPISNAKIEELITELKEEYSIIIVTHNMQQALRVSDRTAFFLNGDLVEYDQTEQIFTS 253 (268)
T ss_pred HHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhcCCEEEEEEeCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 99999999999999999999999999999999988777999999999998865 999999999999999999998754
No 474
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-37 Score=343.55 Aligned_cols=204 Identities=29% Similarity=0.477 Sum_probs=164.4
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcC---CCC--CCcEEEECCEecCCC--CHHHHhcccEEecCCCCC
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERF---YDP--VKGNILLDGHKIKKL--QLKWLRSQMGLVNQEPIL 402 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~---~~~--~~G~i~~~g~~~~~~--~~~~~r~~i~~v~Q~~~l 402 (1224)
++||+|.. +++++++|+||||||||||+++|+|+ ++| ++|+|.++|+++... +...+|++++||+|++.+
T Consensus 19 l~~vs~~i---~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 95 (250)
T PRK14245 19 LKGISMEI---EEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPNP 95 (250)
T ss_pred EeeeeEEE---eCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECCEecccccccHHHHhhheEEEecCCcc
Confidence 44444444 25679999999999999999999997 454 589999999998754 345678899999999999
Q ss_pred CcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhc--cccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEE
Q 047171 403 FSTSIKENILIGKPG--A-SMETVVKAAQAANVHDFIMKL--NDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLL 477 (1224)
Q Consensus 403 f~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ilil 477 (1224)
|+.|++||+.++... . ..++..+ .+.+.++.+ ++.+++...+.+.+||||||||++|||||+.+|++|||
T Consensus 96 ~~~tv~~nl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrv~laral~~~p~lllL 170 (250)
T PRK14245 96 FPKSIFENVAYGLRVNGVKDNAFIRQ-----RVEETLKGAALWDEVKDKLKESAFALSGGQQQRLCIARAMAVSPSVLLM 170 (250)
T ss_pred CcccHHHHHHHHHHHcCCCcHHHHHH-----HHHHHHHHcCCCcchhhhhhCCcccCCHHHHHHHHHHHHHhcCCCEEEE
Confidence 988999999875321 1 1111111 122333333 11223456778899999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 478 DEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 478 DE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 171 DEPt~~LD~~~~~~l~~~l~~~~~~~tiiivtH~~~~~~~~~d~v~~l~~G~~~~~~~~~~~~~~ 235 (250)
T PRK14245 171 DEPASALDPISTAKVEELIHELKKDYTIVIVTHNMQQAARVSDKTAFFYMGEMVEYDDTKKIFTN 235 (250)
T ss_pred eCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhCCEEEEEECCEEEEECCHHHHhcC
Confidence 9999999999999999999988778999999999999865 999999999999999999998754
No 475
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=4.5e-37 Score=333.09 Aligned_cols=196 Identities=22% Similarity=0.327 Sum_probs=163.8
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCHHHHhcce
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNLRKLRSCI 1056 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~~~lR~~i 1056 (1224)
.|+++|++++|++ .++++|+||+|++||+++|+|+||||||||+++|.|+++|++|+|.++|.++... ..++.+
T Consensus 11 ~l~~~~l~~~~~~---~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~G~i~~~g~~i~~~---~~~~~i 84 (214)
T PRK13543 11 LLAAHALAFSRNE---EPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHVESGQIQIDGKTATRG---DRSRFM 84 (214)
T ss_pred eEEEeeEEEecCC---ceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCCCCeeEEECCEEccch---hhhhce
Confidence 5999999999963 3599999999999999999999999999999999999999999999999988652 346689
Q ss_pred EEEecCCCCCcc-cHHHHHccCCC--CCC-HHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1057 ALVSQEPTLFAG-TIRQNIVYGKE--VAT-EAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1057 ~~V~Qdp~LF~g-TIreNl~~~~~--~~~-deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
+|++|++.+|.+ |++||+.++.. ... ++.+.++++..++ +..++ ....+||||||||++||||++
T Consensus 85 ~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l-------~~~~~----~~~~~LS~G~~qrv~laral~ 153 (214)
T PRK13543 85 AYLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGL-------AGYED----TLVRQLSAGQKKRLALARLWL 153 (214)
T ss_pred EEeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCC-------hhhcc----CChhhCCHHHHHHHHHHHHHh
Confidence 999999998886 99999976421 111 2233334433332 22233 344679999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeC
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKN 1189 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~ 1189 (1224)
++|++|||||||++||+++.+.+.+.|++.. +++|+|++||+++.+.. ||++++++.
T Consensus 154 ~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~~~~~~~~~i~~l~~ 212 (214)
T PRK13543 154 SPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAYAAPPVRTRMLTLEA 212 (214)
T ss_pred cCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChhhhhhhcceEEEEee
Confidence 9999999999999999999999999998764 57899999999999966 999999874
No 476
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.7e-37 Score=342.51 Aligned_cols=202 Identities=26% Similarity=0.425 Sum_probs=167.0
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti 407 (1224)
.++|++|.. +++++++|+|+||||||||+++|+|+++|++|+|.++|+++...+...+++.++|++|++.++.+ |+
T Consensus 17 il~~is~~i---~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 93 (255)
T PRK11231 17 ILNDLSLSL---PTGKITALIGPNGCGKSTLLKCFARLLTPQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGITV 93 (255)
T ss_pred EEeeeeeEE---cCCcEEEEECCCCCCHHHHHHHHhCCcCCCCcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCccH
Confidence 455555554 25679999999999999999999999999999999999999888877888899999999988876 99
Q ss_pred HHHHhcCCCCC----C--HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCC
Q 047171 408 KENILIGKPGA----S--METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEAT 481 (1224)
Q Consensus 408 ~~ni~~g~~~~----~--~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~t 481 (1224)
.||+.++.... . .++. ...+.+.++.+ |++......+..||||||||++||||++.+|++|||||||
T Consensus 94 ~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEP~ 166 (255)
T PRK11231 94 RELVAYGRSPWLSLWGRLSAED-----NARVNQAMEQT--RINHLADRRLTDLSGGQRQRAFLAMVLAQDTPVVLLDEPT 166 (255)
T ss_pred HHHHHhccchhhhhccCCCHHH-----HHHHHHHHHHc--CCHHHHcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 99999863210 0 0110 11122333333 4444566778899999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 482 SALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 482 s~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
++||+++...+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|++++.|+.+++..
T Consensus 167 ~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 227 (255)
T PRK11231 167 TYLDINHQVELMRLMRELNTQGKTVVTVLHDLNQASRYCDHLVVLANGHVMAQGTPEEVMT 227 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHhcCEEEEEECCeEEEEcCHHHhcC
Confidence 9999999999999998864 58999999999999875 99999999999999999988764
No 477
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-37 Score=375.82 Aligned_cols=212 Identities=25% Similarity=0.421 Sum_probs=176.0
Q ss_pred cEEEEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH-HHHhcc
Q 047171 977 FIELKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL-RKLRSC 1055 (1224)
Q Consensus 977 ~I~~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~-~~lR~~ 1055 (1224)
.|+++|++++|++ .++|+|+||+|++||+++|+||||||||||+++|+|+++|++|+|.++|.++...+. +.+|++
T Consensus 4 ~l~~~~l~~~~~~---~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~~G~I~~~g~~i~~~~~~~~~~~~ 80 (501)
T PRK11288 4 YLSFDGIGKTFPG---VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPDAGSILIDGQEMRFASTTAALAAG 80 (501)
T ss_pred eEEEeeeEEEECC---EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEECCCCCHHHHHhCC
Confidence 4899999999963 459999999999999999999999999999999999999999999999999876543 456889
Q ss_pred eEEEecCCCCCc-ccHHHHHccCCC----C-CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHH
Q 047171 1056 IALVSQEPTLFA-GTIRQNIVYGKE----V-ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALAR 1129 (1224)
Q Consensus 1056 i~~V~Qdp~LF~-gTIreNl~~~~~----~-~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLAR 1129 (1224)
++||||++.+|. .|++||+.++.. . .+..+..+ .+.+++..+ |++........+||||||||++|||
T Consensus 81 i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lar 153 (501)
T PRK11288 81 VAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNY-----EAREQLEHL--GVDIDPDTPLKYLSIGQRQMVEIAK 153 (501)
T ss_pred EEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHH-----HHHHHHHHc--CCCCCcCCchhhCCHHHHHHHHHHH
Confidence 999999998887 499999987531 1 12222211 122333333 3333334556689999999999999
Q ss_pred HHccCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecCh
Q 047171 1130 AVLKNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQ 1198 (1224)
Q Consensus 1130 All~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~ 1198 (1224)
||+++|++|||||||++||+.+.+.+.+.|+++. +|+|+|+|||+++.+.. ||+|++|++|++++.++.
T Consensus 154 al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~~~~~~~d~i~~l~~G~i~~~~~~ 224 (501)
T PRK11288 154 ALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRMEEIFALCDAITVFKDGRYVATFDD 224 (501)
T ss_pred HHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecCc
Confidence 9999999999999999999999999999998875 47899999999999866 999999999999977653
No 478
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.1e-37 Score=343.32 Aligned_cols=207 Identities=31% Similarity=0.458 Sum_probs=166.6
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecC--CCCHHHHhcccEE
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIK--KLQLKWLRSQMGL 395 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~--~~~~~~~r~~i~~ 395 (1224)
|+++||+++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|+++. +.+...+|++|+|
T Consensus 2 l~~~~l~~~~~~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~i~~~~~~~~~~~~~i~~ 81 (271)
T PRK13638 2 LATSDLWFRYQDEPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQKGAVLWQGKPLDYSKRGLLALRQQVAT 81 (271)
T ss_pred eEEEEEEEEcCCcccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCCccEEEECCEEcccccCCHHHHHhheEE
Confidence 4556666666432 256799999999999999999999999999999999999985 3344567889999
Q ss_pred ecCCCC--CCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccC
Q 047171 396 VNQEPI--LFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRD 471 (1224)
Q Consensus 396 v~Q~~~--lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~ 471 (1224)
|+|++. ++..|+.+|+.++.. ..+.++..+ .+.+.++.+ |++........+||||||||++|||||+.+
T Consensus 82 v~q~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrl~laraL~~~ 154 (271)
T PRK13638 82 VFQDPEQQIFYTDIDSDIAFSLRNLGVPEAEITR-----RVDEALTLV--DAQHFRHQPIQCLSHGQKKRVAIAGALVLQ 154 (271)
T ss_pred EeeChhhccccccHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CCHhHhcCCchhCCHHHHHHHHHHHHHHcC
Confidence 999985 567799999987521 122222211 122334443 344444567789999999999999999999
Q ss_pred CCEEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 472 PKILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 472 ~~ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|++|||||||++||+.+...+.+.|.++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 155 p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 226 (271)
T PRK13638 155 ARYLLLDEPTAGLDPAGRTQMIAIIRRIVAQGNHVIISSHDIDLIYEISDAVYVLRQGQILTHGAPGEVFAC 226 (271)
T ss_pred CCEEEEeCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999998864 58999999999999965 999999999999999999888653
No 479
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=3.7e-37 Score=350.43 Aligned_cols=202 Identities=23% Similarity=0.442 Sum_probs=170.8
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti 407 (1224)
.++|++|.. ++++++||+||||||||||+++|+|+++|++|+|.++|.++.. +...+|+++||++|++.+|+. |+
T Consensus 17 ~l~~is~~i---~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~~G~i~i~g~~~~~-~~~~~~~~ig~~~q~~~l~~~~tv 92 (301)
T TIGR03522 17 ALDEVSFEA---QKGRIVGFLGPNGAGKSTTMKIITGYLPPDSGSVQVCGEDVLQ-NPKEVQRNIGYLPEHNPLYLDMYV 92 (301)
T ss_pred EEEEeEEEE---eCCeEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEEccc-ChHHHHhceEEecCCCCCCCCCcH
Confidence 455555554 3577999999999999999999999999999999999999876 345678899999999999876 99
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
.||+.+... ....++..+ .+++.++.+ |++.....+..+||||||||++|||||+.+|++|||||||++||
T Consensus 93 ~e~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD 165 (301)
T TIGR03522 93 REYLQFIAGIYGMKGQLLKQ-----RVEEMIELV--GLRPEQHKKIGQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLD 165 (301)
T ss_pred HHHHHHHHHHcCCCHHHHHH-----HHHHHHHHC--CCchHhcCchhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 999986321 112222211 234456666 67777788889999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 486 AESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+.+.+.+++.++++.+++|+|++||+++.+.. ||+|++|++|+++..|+.+++.+.
T Consensus 166 ~~~~~~l~~~l~~~~~~~tiii~sH~l~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 222 (301)
T TIGR03522 166 PNQLVEIRNVIKNIGKDKTIILSTHIMQEVEAICDRVIIINKGKIVADKKLDELSAA 222 (301)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEEcCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHHh
Confidence 99999999999988778999999999999876 999999999999999999998653
No 480
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-37 Score=340.68 Aligned_cols=201 Identities=30% Similarity=0.536 Sum_probs=165.6
Q ss_pred EEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecC------CCCHHHHhcccEEecCCCCCC
Q 047171 330 FKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIK------KLQLKWLRSQMGLVNQEPILF 403 (1224)
Q Consensus 330 ~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~------~~~~~~~r~~i~~v~Q~~~lf 403 (1224)
++|++|.. .++++++|+||||||||||+++|+|+++|++|+|.++|.++. ..+....|++|+|++|++.+|
T Consensus 18 l~~vsl~i---~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (242)
T PRK11124 18 LFDITLDC---PQGETLVLLGPSGAGKSSLLRVLNLLEMPRSGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYNLW 94 (242)
T ss_pred EeeeeeEE---cCCCEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEecccccccchhhHHHHHhheEEEecCcccc
Confidence 44444443 256799999999999999999999999999999999999873 123456788999999999998
Q ss_pred cc-cHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeC
Q 047171 404 ST-SIKENILIGKP---GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDE 479 (1224)
Q Consensus 404 ~~-ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE 479 (1224)
.. |+.||+.++.. ....++. ...+.++++.+ |++........+||||||||++||||++.+|++|||||
T Consensus 95 ~~~tv~e~i~~~~~~~~~~~~~~~-----~~~~~~~l~~~--gl~~~~~~~~~~LS~G~~qrv~laral~~~p~llilDE 167 (242)
T PRK11124 95 PHLTVQQNLIEAPCRVLGLSKDQA-----LARAEKLLERL--RLKPYADRFPLHLSGGQQQRVAIARALMMEPQVLLFDE 167 (242)
T ss_pred CCCcHHHHHHHHHHHHcCCCHHHH-----HHHHHHHHHHc--CChhhhhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcC
Confidence 75 99999975311 1122221 12234566666 67767788889999999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 480 ATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 480 ~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
||++||+++...+.+.++++. +|+|+|++||+++.+.. ||++++|++|++++.|+++++.+
T Consensus 168 Pt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~~~~~~~d~i~~l~~g~i~~~~~~~~~~~ 230 (242)
T PRK11124 168 PTAALDPEITAQIVSIIRELAETGITQVIVTHEVEVARKTASRVVYMENGHIVEQGDASCFTQ 230 (242)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCEEEEEECCEEEEeCCHHHhcC
Confidence 999999999999999998865 48999999999999975 99999999999999999887643
No 481
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-37 Score=343.78 Aligned_cols=209 Identities=32% Similarity=0.471 Sum_probs=172.8
Q ss_pred ccEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCC--CCHHH
Q 047171 326 GEIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKK--LQLKW 388 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~~ 388 (1224)
..|+++||+|+|++. .++++++|+||||||||||+++|+|+++ |++|+|.+||+++.. .+...
T Consensus 19 ~~l~~~nl~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~ 98 (267)
T PRK14237 19 IALSTKDLHVYYGKKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYE 98 (267)
T ss_pred eEEEEeeEEEEECCeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHH
Confidence 358889999988643 3577999999999999999999999997 589999999999864 34556
Q ss_pred HhcccEEecCCCCCCcccHHHHHhcCCCC--C-CHH----HHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHH
Q 047171 389 LRSQMGLVNQEPILFSTSIKENILIGKPG--A-SME----TVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQR 461 (1224)
Q Consensus 389 ~r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~~~----~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qr 461 (1224)
+|+.|+||+|++.+|+.|++||+.++... . ..+ ++.++++..++.+ +.++..+..+.+||||||||
T Consensus 99 ~~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~-------~i~~~~~~~~~~LS~G~~qr 171 (267)
T PRK14237 99 MRKHIGMVFQRPNPFAKSIYENITFALERAGVKDKKVLDEIVETSLKQAALWD-------QVKDDLHKSALTLSGGQQQR 171 (267)
T ss_pred HhcceEEEecCCccccccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCc-------hhhhhhcCCcccCCHHHHHH
Confidence 78899999999999989999999886321 1 111 1222222222211 22345678889999999999
Q ss_pred HHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 462 IAIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 462 iaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
++||||++++|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++.+
T Consensus 172 l~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiii~tH~~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~ 251 (267)
T PRK14237 172 LCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKKNYTIIIVTHNMQQAARASDYTAFFYLGDLIEYDKTRNIFT 251 (267)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhcCEEEEEECCEEEEeCCHHHHhc
Confidence 99999999999999999999999999999999999988778999999999999865 99999999999999999999875
Q ss_pred h
Q 047171 541 M 541 (1224)
Q Consensus 541 ~ 541 (1224)
.
T Consensus 252 ~ 252 (267)
T PRK14237 252 N 252 (267)
T ss_pred C
Confidence 3
No 482
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-37 Score=376.13 Aligned_cols=213 Identities=24% Similarity=0.381 Sum_probs=177.9
Q ss_pred EEEEEEECCCCCCccceeceeEEEeCCcEEEEEcCCCCChHHHHHHHhcccCCCCceEEECCccCCCCCH-HHHhcceEE
Q 047171 980 LKNVFFSYPSRPDQMIFKGLTLKIEAGKTVALVGQSGSGKSTIIGLIERFYDPQSGSVMVDERNIKSYNL-RKLRSCIAL 1058 (1224)
Q Consensus 980 ~~~vsf~Y~~~~~~~vL~~isl~I~~Ge~vaIVG~SGsGKSTL~~lL~rl~~p~~G~I~idG~di~~~~~-~~lR~~i~~ 1058 (1224)
++|++++|++ .++|+|+||+|++||++||+||||||||||+++|+|+++|++|+|.+||.++...+. +.+|++++|
T Consensus 1 ~~nl~~~~~~---~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~ 77 (491)
T PRK10982 1 MSNISKSFPG---VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKDSGSILFQGKEIDFKSSKEALENGISM 77 (491)
T ss_pred CCceEEEeCC---EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCCceEEEECCEECCCCCHHHHHhCCEEE
Confidence 3689999963 469999999999999999999999999999999999999999999999999876654 346788999
Q ss_pred EecCCCCCc-ccHHHHHccCCC---C--CCHHHHHHHHHHHhHHHHHHhcccccccccCCCCCCCChHHHHHHHHHHHHc
Q 047171 1059 VSQEPTLFA-GTIRQNIVYGKE---V--ATEAEIRKAAVLANAHEFISSTEDGYDTYCGERGVQLSGGQKQRIALARAVL 1132 (1224)
Q Consensus 1059 V~Qdp~LF~-gTIreNl~~~~~---~--~~deei~~al~~a~l~~~I~~lp~gldt~vge~G~~LSGGQrQRlaLARAll 1132 (1224)
|||++.+|. .|++||+.++.. . .+.++.++ .+.+.+..+ |++........+||||||||++|||||+
T Consensus 78 v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgGq~qrv~lA~al~ 150 (491)
T PRK10982 78 VHQELNLVLQRSVMDNMWLGRYPTKGMFVDQDKMYR-----DTKAIFDEL--DIDIDPRAKVATLSVSQMQMIEIAKAFS 150 (491)
T ss_pred EecccccccCCCHHHHhhcccccccccccCHHHHHH-----HHHHHHHHc--CCCCCccCchhhCCHHHHHHHHHHHHHH
Confidence 999998765 699999987531 1 12222222 122333333 4444455566789999999999999999
Q ss_pred cCCCEEEEeccCCCCCHHHHHHHHHHHHHhc-CCCeEEEEccCchhhhh-cCEEEEEeCCEEEEecChhHHh
Q 047171 1133 KNPMILLLDEATSALDSASENLVQEALEKMM-VGRTCVVVAHRLSTIQK-ADNIVVIKNGKVVEQGTQSSLL 1202 (1224)
Q Consensus 1133 ~~p~ILlLDEaTSaLD~~te~~I~~~l~~~~-~~~TvI~IaHrl~ti~~-aD~I~vl~~G~Ive~Gt~~eLl 1202 (1224)
++|++|||||||++||+.+.+.+.+.|+++. +++|+|+|||+++.+.. ||+|++|++|++++.|+++++.
T Consensus 151 ~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~ 222 (491)
T PRK10982 151 YNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKERGCGIVYISHKMEEIFQLCDEITILRDGQWIATQPLAGLT 222 (491)
T ss_pred hCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHHHHHhCCEEEEEECCEEEeecChhhCC
Confidence 9999999999999999999999999998865 57899999999999865 9999999999999999988763
No 483
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-37 Score=339.71 Aligned_cols=194 Identities=30% Similarity=0.465 Sum_probs=163.2
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
.|+++||+++|++. .++++++|+||||||||||+++|+|+++|++|+|.++|.++. .+++.++|+
T Consensus 12 ~l~i~~l~~~~~~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~~G~i~~~g~~~~-----~~~~~i~~v 86 (257)
T PRK11247 12 PLLLNAVSKRYGERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPSAGELLAGTAPLA-----EAREDTRLM 86 (257)
T ss_pred cEEEEEEEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCCeEEEECCEEHH-----HhhCceEEE
Confidence 47888888888643 256799999999999999999999999999999999998763 457789999
Q ss_pred cCCCCCCc-ccHHHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEE
Q 047171 397 NQEPILFS-TSIKENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKIL 475 (1224)
Q Consensus 397 ~Q~~~lf~-~ti~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~il 475 (1224)
+|++.+|+ .|++||+.++......+++ .+.++.+ |++......+.+||||||||++|||||+.+|++|
T Consensus 87 ~q~~~l~~~~tv~enl~~~~~~~~~~~~---------~~~l~~~--gl~~~~~~~~~~LSgGqkqrl~laraL~~~p~ll 155 (257)
T PRK11247 87 FQDARLLPWKKVIDNVGLGLKGQWRDAA---------LQALAAV--GLADRANEWPAALSGGQKQRVALARALIHRPGLL 155 (257)
T ss_pred ecCccCCCCCcHHHHHHhcccchHHHHH---------HHHHHHc--CChhHhcCChhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999887 5999999986422112222 3344444 5555567778899999999999999999999999
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChH
Q 047171 476 LLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHD 536 (1224)
Q Consensus 476 ilDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~ 536 (1224)
||||||++||+.+...+.+.|.++. .++|+|+|||+++.+.. ||+|++|++|++++.|+.+
T Consensus 156 lLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~~~~~~~d~i~~l~~G~i~~~~~~~ 219 (257)
T PRK11247 156 LLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVSEAVAMADRVLLIEEGKIGLDLTVD 219 (257)
T ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEeecccc
Confidence 9999999999999999999998763 47999999999999865 9999999999999988765
No 484
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.4e-37 Score=336.76 Aligned_cols=200 Identities=28% Similarity=0.424 Sum_probs=167.3
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEec
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVN 397 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~ 397 (1224)
|+++||++.|++. +++++++|+||||||||||+++|+|+++|++|+|.++|.++...+...+++.++|++
T Consensus 8 i~~~~l~~~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~ 87 (225)
T PRK10247 8 LQLQNVGYLAGDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLISPTSGTLLFEGEDISTLKPEIYRQQVSYCA 87 (225)
T ss_pred EEEeccEEeeCCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCeEEECCEEcCcCCHHHHHhccEEEe
Confidence 5666666666432 356799999999999999999999999999999999999998888877888999999
Q ss_pred CCCCCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCCCE
Q 047171 398 QEPILFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDPKI 474 (1224)
Q Consensus 398 Q~~~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~~i 474 (1224)
|++.+|+.|++||+.++.. ....+ ...+.+.++.+ |+. +.....+.+||||||||++|||||+.+|++
T Consensus 88 q~~~l~~~tv~enl~~~~~~~~~~~~-------~~~~~~~l~~~--~l~~~~~~~~~~~LS~G~~qrv~laral~~~p~l 158 (225)
T PRK10247 88 QTPTLFGDTVYDNLIFPWQIRNQQPD-------PAIFLDDLERF--ALPDTILTKNIAELSGGEKQRISLIRNLQFMPKV 158 (225)
T ss_pred cccccccccHHHHHHhHHhhcCCChH-------HHHHHHHHHHc--CCChHHhcCCcccCCHHHHHHHHHHHHHhcCCCE
Confidence 9999998999999987421 01111 01223455665 553 456788899999999999999999999999
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhccCEEEEEe-CceEEeecChH
Q 047171 475 LLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQ-SGRVIESGSHD 536 (1224)
Q Consensus 475 lilDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~-~G~i~~~g~~~ 536 (1224)
+||||||++||+.+...+.+.+.++. .|+|+|++||+++.+..||+|++|+ ++..+++|+|+
T Consensus 159 lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~~~~~d~i~~l~~~~~~~~~~~~~ 223 (225)
T PRK10247 159 LLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDEINHADKVITLQPHAGEMQEARYE 223 (225)
T ss_pred EEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHHHHhCCEEEEEecccchHhhhhhc
Confidence 99999999999999999999998864 3889999999999998899999995 67778889886
No 485
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.4e-37 Score=341.58 Aligned_cols=207 Identities=29% Similarity=0.500 Sum_probs=171.0
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCC--CCHHHHh
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKK--LQLKWLR 390 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~~~r 390 (1224)
|+++||+++|++. +++++++|+|+||||||||+++|+|+++ |++|+|.++|+++.. .+...+|
T Consensus 11 l~i~~v~~~~~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~ 90 (264)
T PRK14243 11 LRTENLNVYYGSFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHGKNLYAPDVDPVEVR 90 (264)
T ss_pred EEEeeeEEEECCEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECCEEccccccChHHHh
Confidence 7778888877532 3567999999999999999999999986 489999999999853 3556778
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCCCC--C---HHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHH
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKPGA--S---METVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIA 465 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~~--~---~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiA 465 (1224)
++|+||+|++.+|+.|+.||+.++.... . .+++.++++.+++.+++ +...+..+.+||||||||++||
T Consensus 91 ~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l-------~~~~~~~~~~LSgGq~qrv~la 163 (264)
T PRK14243 91 RRIGMVFQKPNPFPKSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEV-------KDKLKQSGLSLSGGQQQRLCIA 163 (264)
T ss_pred hhEEEEccCCccccccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhH-------HHHhcCCcccCCHHHHHHHHHH
Confidence 8999999999999889999998864211 1 12233333444433322 2235677889999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEe---------CceEEeecCh
Q 047171 466 RALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQ---------SGRVIESGSH 535 (1224)
Q Consensus 466 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~---------~G~i~~~g~~ 535 (1224)
|||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|+ +|++++.|++
T Consensus 164 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tvi~vtH~~~~~~~~~d~v~~l~~~~~~~~~~~g~i~~~~~~ 243 (264)
T PRK14243 164 RAIAVQPEVILMDEPCSALDPISTLRIEELMHELKEQYTIIIVTHNMQQAARVSDMTAFFNVELTEGGGRYGYLVEFDRT 243 (264)
T ss_pred HHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHHhCCEEEEEecccccccccCceEEEeCCH
Confidence 9999999999999999999999999999999988777999999999999876 99999998 8999999999
Q ss_pred HHHHhh
Q 047171 536 DVLMQM 541 (1224)
Q Consensus 536 ~~l~~~ 541 (1224)
+|+.+.
T Consensus 244 ~~~~~~ 249 (264)
T PRK14243 244 EKIFNS 249 (264)
T ss_pred HHHHhC
Confidence 999764
No 486
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=5.1e-37 Score=352.21 Aligned_cols=207 Identities=29% Similarity=0.485 Sum_probs=172.3
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEe
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLV 396 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v 396 (1224)
-|+++||+++|++. ++|+++||+||||||||||+++|+|+++|++|+|.++|+++...+ ...++.||||
T Consensus 41 ~i~i~nl~k~y~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~~G~i~i~G~~~~~~~-~~~~~~ig~v 119 (340)
T PRK13536 41 AIDLAGVSKSYGDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPDAGKITVLGVPVPARA-RLARARIGVV 119 (340)
T ss_pred eEEEEEEEEEECCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCCceEEEECCEECCcch-HHHhccEEEE
Confidence 48999999999753 367799999999999999999999999999999999999987654 4678899999
Q ss_pred cCCCCCCc-ccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCC
Q 047171 397 NQEPILFS-TSIKENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPK 473 (1224)
Q Consensus 397 ~Q~~~lf~-~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ 473 (1224)
||++.++. .|+.||+.+... ..+.++..+. ++++++.+ |++........+||||||||++|||||+.+|+
T Consensus 120 ~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~-----~~~ll~~~--~L~~~~~~~~~~LS~G~kqrv~lA~aL~~~P~ 192 (340)
T PRK13536 120 PQFDNLDLEFTVRENLLVFGRYFGMSTREIEAV-----IPSLLEFA--RLESKADARVSDLSGGMKRRLTLARALINDPQ 192 (340)
T ss_pred eCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHH-----HHHHHHHc--CCchhhCCChhhCCHHHHHHHHHHHHHhcCCC
Confidence 99998874 599999985321 1222222221 22334433 44444566677999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 474 ILLLDEATSALDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 474 ililDE~ts~lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|||||||++||+.+...+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|+++..|+.+++.+.
T Consensus 193 lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~e~~~~~d~i~il~~G~i~~~g~~~~l~~~ 262 (340)
T PRK13536 193 LLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFMEEAERLCDRLCVLEAGRKIAEGRPHALIDE 262 (340)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHHHHHHhCCEEEEEECCEEEEEcCHHHHHhh
Confidence 999999999999999999999998864 58999999999999976 999999999999999999998754
No 487
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.2e-37 Score=334.25 Aligned_cols=191 Identities=37% Similarity=0.597 Sum_probs=160.9
Q ss_pred EEEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCC--CCcc
Q 047171 328 IEFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPI--LFST 405 (1224)
Q Consensus 328 i~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~--lf~~ 405 (1224)
-.++|++|..+ ++++++|+||||||||||+++|+|+++|++|+|.++|+++...+...+++.|+|++|++. +++.
T Consensus 15 ~il~~vs~~i~---~G~~~~l~G~nGsGKSTLl~~l~G~~~~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 15 PALDDISLTIK---KGEFVLIVGPNGSGKSTLLRLLNGLLGPTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeecceEEEEc---CCcEEEEECCCCCCHHHHHHHHhcCCCCCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 35788888874 567999999999999999999999999999999999999988777778889999999983 5678
Q ss_pred cHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCC
Q 047171 406 SIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSA 483 (1224)
Q Consensus 406 ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~ 483 (1224)
|++||+.++... .+.++..+ .+.+.++.+ |++.....+..+||||||||++|||||+.+|++|||||||++
T Consensus 92 t~~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEPt~~ 164 (211)
T cd03225 92 TVEEEVAFGLENLGLPEEEIEE-----RVEEALELV--GLEGLRDRSPFTLSGGQKQRVAIAGVLAMDPDILLLDEPTAG 164 (211)
T ss_pred cHHHHHHHHHHHcCCCHHHHHH-----HHHHHHHHc--CcHhhhcCCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 999999875321 12221111 223445555 555566778899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCce
Q 047171 484 LDAESERIVQEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGR 528 (1224)
Q Consensus 484 lD~~~~~~i~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~ 528 (1224)
||+++...+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|+
T Consensus 165 LD~~~~~~~~~~l~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~G~ 211 (211)
T cd03225 165 LDPAGRRELLELLKKLKAEGKTIIIVTHDLDLLLELADRVIVLEDGK 211 (211)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhCCEEEEEeCCC
Confidence 99999999999998865 48999999999999987 99999999985
No 488
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.3e-37 Score=346.34 Aligned_cols=192 Identities=30% Similarity=0.522 Sum_probs=162.3
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCC----CHHHHhcccEEecCCC--CCCcccHHHHHhcCC
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKL----QLKWLRSQMGLVNQEP--ILFSTSIKENILIGK 415 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~----~~~~~r~~i~~v~Q~~--~lf~~ti~~ni~~g~ 415 (1224)
+|++++|+||||||||||+++|+|+++|++|+|.++|+++... +....++.|+|++|+| .+|+.|+.|||.++.
T Consensus 32 ~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~ 111 (287)
T PRK13641 32 EGSFVALVGHTGSGKSTLMQHFNALLKPSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQLFENTVLKDVEFGP 111 (287)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhcCCCCCCcEEEECCEECccccccchHHHHHhceEEEEeChhhhhccchHHHHHHHHH
Confidence 5679999999999999999999999999999999999998653 2456778899999998 577889999998753
Q ss_pred C--CCCHHHHHHHHHHhcHHHHHHhcccccc-ccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHH
Q 047171 416 P--GASMETVVKAAQAANVHDFIMKLNDGYE-TKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIV 492 (1224)
Q Consensus 416 ~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~-t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i 492 (1224)
. ..+.++..+ .+.++++.+ |++ ........+||||||||++|||||+.+|++|||||||++||+.+...+
T Consensus 112 ~~~~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~~LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l 184 (287)
T PRK13641 112 KNFGFSEDEAKE-----KALKWLKKV--GLSEDLISKSPFELSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEM 184 (287)
T ss_pred HHcCCCHHHHHH-----HHHHHHHHc--CCChhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHH
Confidence 2 122222211 233455555 665 356778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHc-CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 493 QEALDQAS-QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 493 ~~~l~~~~-~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
.+.|.++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 185 ~~~l~~l~~~g~tvlivsH~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~ 234 (287)
T PRK13641 185 MQLFKDYQKAGHTVILVTHNMDDVAEYADDVLVLEHGKLIKHASPKEIFS 234 (287)
T ss_pred HHHHHHHHhCCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHhc
Confidence 99998874 58999999999999865 99999999999999999998864
No 489
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=3.5e-37 Score=334.46 Aligned_cols=193 Identities=29% Similarity=0.502 Sum_probs=159.4
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCc-ccH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFS-TSI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~-~ti 407 (1224)
.++|++|... ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+.. +++++|++|++.+|. .|+
T Consensus 15 ~l~~is~~i~---~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~G~v~~~g~~~~~~~~~--~~~i~~~~q~~~~~~~~tv 89 (213)
T cd03301 15 ALDDLNLDIA---DGEFVVLLGPSGCGKTTTLRMIAGLEEPTSGRIYIGGRDVTDLPPK--DRDIAMVFQNYALYPHMTV 89 (213)
T ss_pred eeeceEEEEc---CCcEEEEECCCCCCHHHHHHHHhCCCCCCceEEEECCEECCcCCcc--cceEEEEecChhhccCCCH
Confidence 4566666653 5779999999999999999999999999999999999998765543 467999999999886 599
Q ss_pred HHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCC
Q 047171 408 KENILIGKP--GASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALD 485 (1224)
Q Consensus 408 ~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD 485 (1224)
+||+.++.. ....++..+ .+.+.++.+ |++........+||||||||++||||++.+|+++||||||++||
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qr~~laral~~~p~llllDEPt~~LD 162 (213)
T cd03301 90 YDNIAFGLKLRKVPKDEIDE-----RVREVAELL--QIEHLLDRKPKQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLD 162 (213)
T ss_pred HHHHHHHHHhcCCCHHHHHH-----HHHHHHHHc--CCHHHHhCChhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 999987532 112222211 123344444 55556677788999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeec
Q 047171 486 AESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESG 533 (1224)
Q Consensus 486 ~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g 533 (1224)
+++.+.+.+.|+++. .|+|+|++||+++.+.. ||+|++|++|++++.|
T Consensus 163 ~~~~~~l~~~l~~~~~~~~~tvi~~sH~~~~~~~~~d~i~~l~~g~~~~~g 213 (213)
T cd03301 163 AKLRVQMRAELKRLQQRLGTTTIYVTHDQVEAMTMADRIAVMNDGQIQQIG 213 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEEEeCCHHHHHHhcCeEEEEECCEEEecC
Confidence 999999999998864 38999999999999876 9999999999999875
No 490
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.8e-37 Score=308.47 Aligned_cols=204 Identities=28% Similarity=0.468 Sum_probs=170.7
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCCCcc-cH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPILFST-SI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~lf~~-ti 407 (1224)
.++||||.- ..|+++||.|||||||||+++.|..++.|++|.|++||.|.... +...|++||+++-+.-|+.. |+
T Consensus 17 AvrdVSF~a---e~Gei~GlLG~NGAGKTT~LRmiatlL~P~~G~v~idg~d~~~~-p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 17 AVRDVSFEA---EEGEITGLLGENGAGKTTLLRMIATLLIPDSGKVTIDGVDTVRD-PSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred hhhheeEEe---ccceEEEEEcCCCCCchhHHHHHHHhccCCCceEEEeecccccC-hHHHhhhcceecCCcChhhhhhH
Confidence 356777764 35779999999999999999999999999999999999998764 56678899999987777755 99
Q ss_pred HHHHhcCCCCCCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHH
Q 047171 408 KENILIGKPGASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAE 487 (1224)
Q Consensus 408 ~~ni~~g~~~~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~ 487 (1224)
+|||.|-.. ...+...--++...+..+.| |++.....+..++|-|+||||+|||||++||++++||||||+||..
T Consensus 93 rEnl~~Fa~---L~~l~~~~~kari~~l~k~l--~l~~~~~rRv~~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~ 167 (245)
T COG4555 93 RENLKYFAR---LNGLSRKEIKARIAELSKRL--QLLEYLDRRVGEFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIR 167 (245)
T ss_pred HHHHHHHHH---HhhhhhhHHHHHHHHHHHHh--ChHHHHHHHHhhhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHH
Confidence 999997422 11111111123334445555 5666677788899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC-CCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 488 SERIVQEALDQASQ-GRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 488 ~~~~i~~~l~~~~~-~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+.+.+++.+.+++. |+++|+.||.+++++. ||+++++.+|+++..|+.+++.++
T Consensus 168 ~~r~~~dfi~q~k~egr~viFSSH~m~EvealCDrvivlh~Gevv~~gs~~~l~~r 223 (245)
T COG4555 168 TRRKFHDFIKQLKNEGRAVIFSSHIMQEVEALCDRVIVLHKGEVVLEGSIEALDAR 223 (245)
T ss_pred HHHHHHHHHHHhhcCCcEEEEecccHHHHHHhhheEEEEecCcEEEcCCHHHHHHH
Confidence 99999999988765 9999999999999985 999999999999999999998765
No 491
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.5e-37 Score=344.84 Aligned_cols=208 Identities=31% Similarity=0.504 Sum_probs=172.7
Q ss_pred cEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCC---cEEEECCEecCCCCHHHHhc
Q 047171 327 EIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVK---GNILLDGHKIKKLQLKWLRS 391 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~---G~i~~~g~~~~~~~~~~~r~ 391 (1224)
.|+++|++|+|++. +++++++|+||||||||||+++|+|+++|++ |+|.++|.++...+...+++
T Consensus 5 ~l~i~~l~~~~~~~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~ 84 (282)
T PRK13640 5 IVEFKHVSFTYPDSKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIRE 84 (282)
T ss_pred eEEEEEEEEEcCCCCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHh
Confidence 36677777777531 2466999999999999999999999999998 89999999998777777888
Q ss_pred ccEEecCCCC--CCcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHH
Q 047171 392 QMGLVNQEPI--LFSTSIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARA 467 (1224)
Q Consensus 392 ~i~~v~Q~~~--lf~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARa 467 (1224)
+||||+|+|. +++.|+.|||.++.+. .+.++..+ .+.+.++.+ |++........+||||||||++||||
T Consensus 85 ~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~-----~~~~~l~~~--~L~~~~~~~~~~LS~G~~qrv~lara 157 (282)
T PRK13640 85 KVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIK-----IVRDVLADV--GMLDYIDSEPANLSGGQKQRVAIAGI 157 (282)
T ss_pred heEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHH-----HHHHHHHHC--CChhHhcCCcccCCHHHHHHHHHHHH
Confidence 9999999983 5678999999886432 22322211 123334444 55555677788999999999999999
Q ss_pred hccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 468 LIRDPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 468 l~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|+.+|++|||||||++||+.+...+.+.|.++. .|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 158 l~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 233 (282)
T PRK13640 158 LAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDEANMADQVLVLDDGKLLAQGSPVEIFSK 233 (282)
T ss_pred HHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHHHHhCCEEEEEECCEEEEeCCHHHHhcC
Confidence 999999999999999999999999999998864 38999999999999988999999999999999999988653
No 492
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.8e-37 Score=339.26 Aligned_cols=208 Identities=32% Similarity=0.550 Sum_probs=169.9
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCC-----CcEEEECCEecCCC--CHHHH
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDPV-----KGNILLDGHKIKKL--QLKWL 389 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~-----~G~i~~~g~~~~~~--~~~~~ 389 (1224)
.|+++||+|+|++. .++++++|+||||||||||+++|+|+++|+ +|+|.++|.++... +...+
T Consensus 4 ~l~~~~l~~~~~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~~~~~~~~~~~~ 83 (251)
T PRK14249 4 KIKIRGVNFFYHKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNENIYSPNLDVVNL 83 (251)
T ss_pred eEEEEEEEEEECCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCEEccccccChHHh
Confidence 36667777776532 256799999999999999999999999997 69999999998643 45577
Q ss_pred hcccEEecCCCCCCcccHHHHHhcCCCC--CC-HHHH----HHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHH
Q 047171 390 RSQMGLVNQEPILFSTSIKENILIGKPG--AS-METV----VKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRI 462 (1224)
Q Consensus 390 r~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~~-~~~~----~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qri 462 (1224)
|+.++||+|++.+|+.|++||+.++... .. .++. .++.+..++. +++.+.....+.+||||||||+
T Consensus 84 ~~~i~~v~q~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~-------~~l~~~~~~~~~~LS~Gq~qrv 156 (251)
T PRK14249 84 RKRVGMVFQQPNPFPKSIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALW-------DEVKDNLHKSGLALSGGQQQRL 156 (251)
T ss_pred hceEEEEecCCccCcCcHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCc-------hhhhhHhhCCcccCCHHHHHHH
Confidence 8899999999999989999999886321 11 1112 2222222222 1223446778899999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 463 AIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 463 aiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|||||+.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 157 ~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tilivsh~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 236 (251)
T PRK14249 157 CIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELKQNYTIAIVTHNMQQAARASDWTGFLLTGDLVEYGRTGEIFSR 236 (251)
T ss_pred HHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHhhCCEEEEEeCCeEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999887678999999999999876 899999999999999999998654
No 493
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-36 Score=339.77 Aligned_cols=202 Identities=28% Similarity=0.433 Sum_probs=167.0
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccEEecCCCCC-CcccH
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMGLVNQEPIL-FSTSI 407 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~~v~Q~~~l-f~~ti 407 (1224)
.++|++|+.+ ++++++|+||||||||||+++|+|+++|++|+|.++|.++...+...++++++|++|++.+ +..|+
T Consensus 17 il~~is~~i~---~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 93 (258)
T PRK13548 17 LLDDVSLTLR---PGEVVAILGPNGAGKSTLLRALSGELSPDSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFTV 93 (258)
T ss_pred eeeeeeEEEc---CCCEEEEECCCCCCHHHHHHHHhCCCCCCCCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCCH
Confidence 3555555542 5679999999999999999999999999999999999999888877778899999999987 56799
Q ss_pred HHHHhcCCCCC--CHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhc------cCCCEEEEeC
Q 047171 408 KENILIGKPGA--SMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALI------RDPKILLLDE 479 (1224)
Q Consensus 408 ~~ni~~g~~~~--~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~------~~~~ililDE 479 (1224)
+||+.++.... ..++.. ..+.+.++.+ |++........+||||||||++|||||+ .+|++|||||
T Consensus 94 ~e~l~~~~~~~~~~~~~~~-----~~~~~~l~~~--~l~~~~~~~~~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDE 166 (258)
T PRK13548 94 EEVVAMGRAPHGLSRAEDD-----ALVAAALAQV--DLAHLAGRDYPQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDE 166 (258)
T ss_pred HHHHHhhhcccCCCcHHHH-----HHHHHHHHHc--CCHhHhcCCcccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeC
Confidence 99998864211 111111 1123344444 5555567778899999999999999999 5999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHh
Q 047171 480 ATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQ 540 (1224)
Q Consensus 480 ~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~ 540 (1224)
||++||+.+...+.+.|.++. +|+|+|++||+++.+.. ||+|++|++|++++.|+++++..
T Consensus 167 Pt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~ 230 (258)
T PRK13548 167 PTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLNLAARYADRIVLLHQGRLVADGTPAEVLT 230 (258)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHHHHHHhcCEEEEEECCEEEeeCCHHHHhC
Confidence 999999999999999998864 58999999999999875 99999999999999999988764
No 494
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.4e-37 Score=342.42 Aligned_cols=208 Identities=29% Similarity=0.460 Sum_probs=171.7
Q ss_pred cEEEEeEEEECCCC------------CCCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCCHHHHhcccE
Q 047171 327 EIEFKDVDFSYPTR------------PDTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQLKWLRSQMG 394 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~------------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~~~~~r~~i~ 394 (1224)
.|+++|++++|++. +++++++|+||||||||||+++|+|+++|++|+|.++|+++...+...+|++++
T Consensus 7 ~l~i~~l~~~~~~~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~G~i~~~g~~~~~~~~~~~~~~i~ 86 (269)
T PRK13648 7 IIVFKNVSFQYQSDASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVKSGEIFYNNQAITDDNFEKLRKHIG 86 (269)
T ss_pred eEEEEEEEEEcCCCCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCCceEEEECCEECCcCCHHHHHhhee
Confidence 36777777777532 256799999999999999999999999999999999999998888878889999
Q ss_pred EecCCCC-C-CcccHHHHHhcCCCC--CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhcc
Q 047171 395 LVNQEPI-L-FSTSIKENILIGKPG--ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIR 470 (1224)
Q Consensus 395 ~v~Q~~~-l-f~~ti~~ni~~g~~~--~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~ 470 (1224)
||+|+|. + +..|+++|+.++... ...++..+ .+.+.++.+ |+.......+.+||||||||++||||++.
T Consensus 87 ~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~LS~G~~qrl~laral~~ 159 (269)
T PRK13648 87 IVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHR-----RVSEALKQV--DMLERADYEPNALSGGQKQRVAIAGVLAL 159 (269)
T ss_pred EEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHH-----HHHHHHHHc--CCchhhhCCcccCCHHHHHHHHHHHHHHc
Confidence 9999985 4 456899999886431 12222211 122333433 44444566778999999999999999999
Q ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHHHHc--CCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 471 DPKILLLDEATSALDAESERIVQEALDQAS--QGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 471 ~~~ililDE~ts~lD~~~~~~i~~~l~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|++|||||||++||+.+.+.+.+.++++. .|+|+|++||+++.+..||+|++|++|++++.|+++++...
T Consensus 160 ~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~~~~~d~i~~l~~G~i~~~g~~~~~~~~ 232 (269)
T PRK13648 160 NPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSEAMEADHVIVMNKGTVYKEGTPTEIFDH 232 (269)
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 999999999999999999999999998864 37899999999999988999999999999999999988653
No 495
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=339.01 Aligned_cols=211 Identities=28% Similarity=0.512 Sum_probs=169.2
Q ss_pred ccEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC--C---CCcEEEECCEecCCC--CHHH
Q 047171 326 GEIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD--P---VKGNILLDGHKIKKL--QLKW 388 (1224)
Q Consensus 326 ~~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~--~---~~G~i~~~g~~~~~~--~~~~ 388 (1224)
+.|+++|++++|++. +++++++|+|+||||||||+++|+|+++ | ++|+|.++|+++... +...
T Consensus 3 ~~l~~~nl~~~~~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~ 82 (252)
T PRK14256 3 NKVKLEQLNVHFGKNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVS 82 (252)
T ss_pred cEEEEEEEEEEeCCeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHH
Confidence 457777777777532 3577999999999999999999999986 4 699999999998643 3456
Q ss_pred HhcccEEecCCCCCCc-ccHHHHHhcCCCC---CCHHHHHHHHHHhcHHHHHHhcc--ccccccccCCCCCCChHHHHHH
Q 047171 389 LRSQMGLVNQEPILFS-TSIKENILIGKPG---ASMETVVKAAQAANVHDFIMKLN--DGYETKVGQFGVQLSGGQKQRI 462 (1224)
Q Consensus 389 ~r~~i~~v~Q~~~lf~-~ti~~ni~~g~~~---~~~~~~~~~~~~~~~~~~i~~l~--~g~~t~~~~~g~~LSgGq~qri 462 (1224)
+|+.++||+|++.+|. .|++||+.++... .+.++..+ .+.+.++.+. ..++...+..+.+||||||||+
T Consensus 83 ~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~~~~~~~~~~~~LS~G~~qrl 157 (252)
T PRK14256 83 IRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADE-----IVESSLKRVALWDEVKDRLKSNAMELSGGQQQRL 157 (252)
T ss_pred hhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHH-----HHHHHHHHcCCchhhhHHhhCCcCcCCHHHHHHH
Confidence 7889999999999887 5999999875311 11111111 1122333331 0112234567889999999999
Q ss_pred HHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 463 AIARALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 463 aiARal~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+||||++.+|++|||||||++||+.+...+.+.|+++.+++|+|++||+++.+.. ||++++|++|++++.|+++++...
T Consensus 158 ~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~tiiivsH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 237 (252)
T PRK14256 158 CIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKEKYTIIIVTHNMQQAARVSDYTAFFYMGDLVECGETKKIFTT 237 (252)
T ss_pred HHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCcEEEEECCHHHHHhhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999999988778999999999999865 999999999999999999998754
No 496
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-36 Score=341.74 Aligned_cols=211 Identities=28% Similarity=0.449 Sum_probs=172.5
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCC--CCHHHH
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKK--LQLKWL 389 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~--~~~~~~ 389 (1224)
-++++||+|+|++. ++++++||+|+||||||||+++|+|+++ |++|+|.++|+++.. .+...+
T Consensus 24 ~l~~~~l~~~~~~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~ 103 (271)
T PRK14238 24 VFDTQNLNLWYGEDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRDQNIFDKSYSVEEL 103 (271)
T ss_pred EEEEeeeEEEECCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECCEEcccccccHHHH
Confidence 48889999988643 3567999999999999999999999987 699999999999853 345667
Q ss_pred hcccEEecCCCCCCcccHHHHHhcCCC--CCCHHHHHHHHHHhcHHHHHHhc--cccccccccCCCCCCChHHHHHHHHH
Q 047171 390 RSQMGLVNQEPILFSTSIKENILIGKP--GASMETVVKAAQAANVHDFIMKL--NDGYETKVGQFGVQLSGGQKQRIAIA 465 (1224)
Q Consensus 390 r~~i~~v~Q~~~lf~~ti~~ni~~g~~--~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGq~qriaiA 465 (1224)
+++++|++|++.+|..|++||+.++.. ....++..+ ..+.+.+..+ .+++.......+.+||||||||++||
T Consensus 104 ~~~i~~v~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~~~l~~~~~~~~~~LSgGe~qrv~la 179 (271)
T PRK14238 104 RTNVGMVFQKPNPFPKSIYDNVTYGPKIHGIKDKKTLD----EIVEKSLRGAAIWDELKDRLHDNAYGLSGGQQQRLCIA 179 (271)
T ss_pred hhhEEEEecCCccccccHHHHHHHHHHhcCCCcHHHHH----HHHHHHHHHcCCcchHHHHHhcCcccCCHHHHHHHHHH
Confidence 889999999999998999999987532 111111111 1111222222 12334456778899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 466 RALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 466 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||+.+|++|||||||++||+.+...+.+.|.++.+++|+|++||+++.+.. ||+|++|++|++++.|+++++...
T Consensus 180 raL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~tiiivsH~~~~i~~~~d~i~~l~~G~i~~~g~~~~~~~~ 256 (271)
T PRK14238 180 RCLAIEPDVILMDEPTSALDPISTLKVEELVQELKKDYSIIIVTHNMQQAARISDKTAFFLNGYVNEYDDTDKIFSN 256 (271)
T ss_pred HHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHcCCEEEEEEcCHHHHHHhCCEEEEEECCEEEEeCCHHHHHcC
Confidence 9999999999999999999999999999999988778999999999999875 999999999999999999998754
No 497
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.5e-37 Score=339.79 Aligned_cols=209 Identities=29% Similarity=0.497 Sum_probs=168.1
Q ss_pred EEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCCC--CHHHHh
Q 047171 328 IEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKKL--QLKWLR 390 (1224)
Q Consensus 328 i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~--~~~~~r 390 (1224)
|+++||+|+|++. +++++++|+||||||||||+++|+|+.+| ++|+|.++|+++... +....+
T Consensus 7 i~~~~l~~~~~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~ 86 (253)
T PRK14261 7 LSTKNLNLWYGEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNGENIMDSGADVVALR 86 (253)
T ss_pred EEEeeeEEEECCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEccccccchhhhh
Confidence 5555555555422 35779999999999999999999999763 489999999999765 456678
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCCC--C-CHHHHHHHHHHhcHHHHHHhc--cccccccccCCCCCCChHHHHHHHHH
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKPG--A-SMETVVKAAQAANVHDFIMKL--NDGYETKVGQFGVQLSGGQKQRIAIA 465 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~~--~-~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGq~qriaiA 465 (1224)
+.++|++|++.+|+.|++||+.++... . ...+..+ .+.+.++.+ .+++.+..++.+.+||||||||++||
T Consensus 87 ~~i~~~~q~~~~~~~tv~eni~~~~~~~~~~~~~~~~~-----~~~~~l~~~~l~~~l~~~~~~~~~~LS~G~~qrv~la 161 (253)
T PRK14261 87 RKIGMVFQRPNPFPKSIYENVAYGPRIHGEKNKKTLDT-----IVEKSLKGAALWDEVKDRLHDSALSLSGGQQQRLCIA 161 (253)
T ss_pred ceEEEEecCCccCcccHHHHHHhhHHhcCCCCHHHHHH-----HHHHHHHHhcCchhhHHHhhcChhhCCHHHHHHHHHH
Confidence 889999999999989999999986421 1 1111111 112222222 22334456788899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 466 RALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 466 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
||++.+|+++||||||++||+.+.+.+.+.|+++.+++|+|++||+++.+.. ||+|++|++|++++.|+.+++...
T Consensus 162 ral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~tvii~sh~~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 238 (253)
T PRK14261 162 RTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKKEYTVIIVTHNMQQAARVSDYTGFMYLGKLIEFDKTTQIFEN 238 (253)
T ss_pred HHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhhCceEEEEEcCHHHHHhhCCEEEEEECCEEEEcCCHHHHHhC
Confidence 9999999999999999999999999999999988777999999999999975 999999999999999999998754
No 498
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.6e-37 Score=344.72 Aligned_cols=193 Identities=30% Similarity=0.459 Sum_probs=161.8
Q ss_pred CCCEEEEEcCCCCcHHHHHHHHhcCCCCCCcEEEECCEecCCCC-HHHHhcccEEecCCCC--CCcccHHHHHhcCCCC-
Q 047171 342 DTPTIGLVGSSGSGKSTVISLLERFYDPVKGNILLDGHKIKKLQ-LKWLRSQMGLVNQEPI--LFSTSIKENILIGKPG- 417 (1224)
Q Consensus 342 ~~~~~~ivG~sGsGKSTl~~ll~~~~~~~~G~i~~~g~~~~~~~-~~~~r~~i~~v~Q~~~--lf~~ti~~ni~~g~~~- 417 (1224)
++++++|+|+||||||||+++|+|+++|++|+|.++|+++.+.+ ...+|+.+|||+|+|. +|..|+.||+.|+...
T Consensus 35 ~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~ 114 (280)
T PRK13633 35 KGEFLVILGRNGSGKSTIAKHMNALLIPSEGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENL 114 (280)
T ss_pred CCCEEEEECCCCCCHHHHHHHHhCCCCCCCceEEECCEeccccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhc
Confidence 46699999999999999999999999999999999999987653 3557889999999984 6777999999986321
Q ss_pred -CCHHHHHHHHHHhcHHHHHHhccccccccccCCCCCCChHHHHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHHH
Q 047171 418 -ASMETVVKAAQAANVHDFIMKLNDGYETKVGQFGVQLSGGQKQRIAIARALIRDPKILLLDEATSALDAESERIVQEAL 496 (1224)
Q Consensus 418 -~~~~~~~~~~~~~~~~~~i~~l~~g~~t~~~~~g~~LSgGq~qriaiARal~~~~~ililDE~ts~lD~~~~~~i~~~l 496 (1224)
.+..+..+ .+++.++.+ |+.........+||||||||++|||||+.+|++|||||||++||+.+...+.+.|
T Consensus 115 ~~~~~~~~~-----~~~~~l~~~--gL~~~~~~~~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l 187 (280)
T PRK13633 115 GIPPEEIRE-----RVDESLKKV--GMYEYRRHAPHLLSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTI 187 (280)
T ss_pred CCCHHHHHH-----HHHHHHHHC--CCHhHhhCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHH
Confidence 12222111 123334443 5555566777899999999999999999999999999999999999999999999
Q ss_pred HHHc--CCCeEEEEeCCcchhhccCEEEEEeCceEEeecChHHHHhh
Q 047171 497 DQAS--QGRTMIIIAHRLSTIRKADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 497 ~~~~--~~~t~i~i~H~l~~~~~ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
.++. .|+|+|++||+++.+..||++++|++|++++.|+++++...
T Consensus 188 ~~l~~~~g~tillvtH~~~~~~~~d~v~~l~~G~i~~~g~~~~~~~~ 234 (280)
T PRK13633 188 KELNKKYGITIILITHYMEEAVEADRIIVMDSGKVVMEGTPKEIFKE 234 (280)
T ss_pred HHHHHhcCCEEEEEecChHHHhcCCEEEEEECCEEEEecCHHHHhcC
Confidence 8874 38999999999999988999999999999999999998754
No 499
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-37 Score=342.93 Aligned_cols=203 Identities=29% Similarity=0.530 Sum_probs=166.1
Q ss_pred EEEeEEEECCCCCCCCEEEEEcCCCCcHHHHHHHHhcCCC-----CCCcEEEECCEecCCCC--HHHHhcccEEecCCCC
Q 047171 329 EFKDVDFSYPTRPDTPTIGLVGSSGSGKSTVISLLERFYD-----PVKGNILLDGHKIKKLQ--LKWLRSQMGLVNQEPI 401 (1224)
Q Consensus 329 ~~~~v~f~y~~~~~~~~~~ivG~sGsGKSTl~~ll~~~~~-----~~~G~i~~~g~~~~~~~--~~~~r~~i~~v~Q~~~ 401 (1224)
.++|++|+.. ++++++|+|+||||||||+++|+|+++ |++|+|.++|+++...+ ...+|+.++||+|++.
T Consensus 20 ~l~~is~~i~---~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 96 (251)
T PRK14244 20 ILFDINLDIY---KREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPN 96 (251)
T ss_pred eeeeeEEEEc---CCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCcc
Confidence 4666666653 577999999999999999999999986 47999999999986543 3456889999999999
Q ss_pred CCcccHHHHHhcCCC--CC--CHHHHHHHHHHhcHHHHHHhccccc----cccccCCCCCCChHHHHHHHHHHHhccCCC
Q 047171 402 LFSTSIKENILIGKP--GA--SMETVVKAAQAANVHDFIMKLNDGY----ETKVGQFGVQLSGGQKQRIAIARALIRDPK 473 (1224)
Q Consensus 402 lf~~ti~~ni~~g~~--~~--~~~~~~~~~~~~~~~~~i~~l~~g~----~t~~~~~g~~LSgGq~qriaiARal~~~~~ 473 (1224)
+|+.|+.||+.++.. +. ..++..+ .+.+.++.+ |+ .+.++..+.+||||||||++||||++++|+
T Consensus 97 ~~~~tv~~ni~~~~~~~~~~~~~~~~~~-----~~~~~l~~~--~l~~~~~~~~~~~~~~LS~Gq~qrv~laral~~~p~ 169 (251)
T PRK14244 97 PFPKSIYDNVAYGPKLHGLAKNKKKLDE-----IVEKSLTSV--GLWEELGDRLKDSAFELSGGQQQRLCIARAIAVKPT 169 (251)
T ss_pred cccCCHHHHHHHHHHhcCCCCCHHHHHH-----HHHHHHHHc--CCCchhhhHhhcChhhCCHHHHHHHHHHHHHhcCCC
Confidence 998999999987621 11 1111111 122333433 33 234567788999999999999999999999
Q ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 474 ILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 474 ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
+|||||||++||+.+.+.+.+.|.++.+++|+|+|||+++.+.. ||+|++|++|++++.|+++++.+.
T Consensus 170 llllDEPt~~LD~~~~~~l~~~l~~~~~~~tiiiisH~~~~~~~~~d~i~~l~~G~i~~~~~~~~~~~~ 238 (251)
T PRK14244 170 MLLMDEPCSALDPVATNVIENLIQELKKNFTIIVVTHSMKQAKKVSDRVAFFQSGRIVEYNTTQEIFKN 238 (251)
T ss_pred EEEEeCCCccCCHHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHhhcCEEEEEECCEEEEeCCHHHHhcC
Confidence 99999999999999999999999988778999999999999875 999999999999999999998754
No 500
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-36 Score=340.95 Aligned_cols=210 Identities=29% Similarity=0.496 Sum_probs=174.2
Q ss_pred cEEEEeEEEECCCC----------CCCCEEEEEcCCCCcHHHHHHHHhcCCCC-----CCcEEEECCEecCCCC-HHHHh
Q 047171 327 EIEFKDVDFSYPTR----------PDTPTIGLVGSSGSGKSTVISLLERFYDP-----VKGNILLDGHKIKKLQ-LKWLR 390 (1224)
Q Consensus 327 ~i~~~~v~f~y~~~----------~~~~~~~ivG~sGsGKSTl~~ll~~~~~~-----~~G~i~~~g~~~~~~~-~~~~r 390 (1224)
.++++||+++|++. +++++++|+|+||||||||+++|+|+++| ++|+|.++|.++.+.+ ...+|
T Consensus 21 ~l~i~nl~~~~~~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~ 100 (276)
T PRK14271 21 AMAAVNLTLGFAGKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGGRSIFNYRDVLEFR 100 (276)
T ss_pred EEEEeeEEEEECCEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECCEEccccchhHHHh
Confidence 47889999998643 35779999999999999999999999986 7999999999987653 45678
Q ss_pred cccEEecCCCCCCcccHHHHHhcCCC---CCCHHHHHHHHHHhcHHHHHHhc--cccccccccCCCCCCChHHHHHHHHH
Q 047171 391 SQMGLVNQEPILFSTSIKENILIGKP---GASMETVVKAAQAANVHDFIMKL--NDGYETKVGQFGVQLSGGQKQRIAIA 465 (1224)
Q Consensus 391 ~~i~~v~Q~~~lf~~ti~~ni~~g~~---~~~~~~~~~~~~~~~~~~~i~~l--~~g~~t~~~~~g~~LSgGq~qriaiA 465 (1224)
++++|++|++.+|+.|++||+.++.. ..+.++..+.+ .+.++.+ +..+++...+.+.+||||||||++||
T Consensus 101 ~~i~~v~q~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~-----~~~l~~~~l~~~~~~~l~~~~~~LSgGq~qrl~LA 175 (276)
T PRK14271 101 RRVGMLFQRPNPFPMSIMDNVLAGVRAHKLVPRKEFRGVA-----QARLTEVGLWDAVKDRLSDSPFRLSGGQQQLLCLA 175 (276)
T ss_pred hheEEeccCCccCCccHHHHHHHHHHhccCCCHHHHHHHH-----HHHHHHcCCCchhhhHhhCCcccCCHHHHHHHHHH
Confidence 89999999999999999999987632 12333332211 2233333 22223456778899999999999999
Q ss_pred HHhccCCCEEEEeCCCCCCCHHHHHHHHHHHHHHcCCCeEEEEeCCcchhhc-cCEEEEEeCceEEeecChHHHHhh
Q 047171 466 RALIRDPKILLLDEATSALDAESERIVQEALDQASQGRTMIIIAHRLSTIRK-ADLIGVLQSGRVIESGSHDVLMQM 541 (1224)
Q Consensus 466 Ral~~~~~ililDE~ts~lD~~~~~~i~~~l~~~~~~~t~i~i~H~l~~~~~-ad~i~vl~~G~i~~~g~~~~l~~~ 541 (1224)
|||+.+|++|||||||++||+.+.+.+.+.|.++.+++|+|+|||+++.+.. ||++++|++|++++.|+++++.+.
T Consensus 176 ral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~tiiivsH~~~~~~~~~dri~~l~~G~i~~~g~~~~~~~~ 252 (276)
T PRK14271 176 RTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLADRLTVIIVTHNLAQAARISDRAALFFDGRLVEEGPTEQLFSS 252 (276)
T ss_pred HHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHhCCEEEEEECCEEEEeCCHHHHHhC
Confidence 9999999999999999999999999999999887667899999999999876 999999999999999999999764
Done!