BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>047174
MGGIVGKPESTTSAWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCK
AIFEKFGGLQNPLGVVIALR

High Scoring Gene Products

Symbol, full name Information P value
AT4G26470 protein from Arabidopsis thaliana 1.9e-21
AT3G24110 protein from Arabidopsis thaliana 3.1e-05

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047174
        (80 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2131458 - symbol:AT4G26470 species:3702 "Arabi...   251  1.9e-21   1
TAIR|locus:2093716 - symbol:AT3G24110 species:3702 "Arabi...   102  3.1e-05   1


>TAIR|locus:2131458 [details] [associations]
            symbol:AT4G26470 species:3702 "Arabidopsis thaliana"
            [GO:0005509 "calcium ion binding" evidence=IEA;ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0007165 "signal transduction"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000041
            "transition metal ion transport" evidence=RCA] [GO:0009407 "toxin
            catabolic process" evidence=RCA] [GO:0009693 "ethylene biosynthetic
            process" evidence=RCA] [GO:0009827 "plant-type cell wall
            modification" evidence=RCA] [GO:0009860 "pollen tube growth"
            evidence=RCA] [GO:0010359 "regulation of anion channel activity"
            evidence=RCA] [GO:0010583 "response to cyclopentenone"
            evidence=RCA] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499
            PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 GO:GO:0005737
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0005509
            Gene3D:1.10.238.10 InterPro:IPR018247 EMBL:AL161565 EMBL:AL022223
            KO:K13448 EMBL:BT021986 EMBL:AK227901 IPI:IPI00547669
            IPI:IPI00852257 PIR:T05057 RefSeq:NP_001078450.1 RefSeq:NP_194377.2
            UniGene:At.2167 UniGene:At.66576 HSSP:P02588
            ProteinModelPortal:Q52K82 SMR:Q52K82 PaxDb:Q52K82 PRIDE:Q52K82
            EnsemblPlants:AT4G26470.1 GeneID:828753 KEGG:ath:AT4G26470
            TAIR:At4g26470 eggNOG:NOG289110 HOGENOM:HOG000241952
            InParanoid:Q52K82 OMA:DWDKNGM PhylomeDB:Q52K82
            ProtClustDB:CLSN2920464 Genevestigator:Q52K82 Uniprot:Q52K82
        Length = 231

 Score = 251 (93.4 bits), Expect = 1.9e-21, P = 1.9e-21
 Identities = 46/66 (69%), Positives = 56/66 (84%)

Query:     1 MGGIVGKPESTTSAWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCK 60
             MGG V K E+    W+PETKLEAK++EA+QRRA+ GT +KSFNSI+LKFPKIDD LRNCK
Sbjct:     1 MGGAVTKSETLQKEWVPETKLEAKIIEAVQRRASRGTTMKSFNSIVLKFPKIDDGLRNCK 60

Query:    61 AIFEKF 66
             AIF++F
Sbjct:    61 AIFQEF 66


>TAIR|locus:2093716 [details] [associations]
            symbol:AT3G24110 species:3702 "Arabidopsis thaliana"
            [GO:0005509 "calcium ion binding" evidence=IEA;ISS] [GO:0005886
            "plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR002048 InterPro:IPR011992 Pfam:PF13499
            PROSITE:PS50222 SMART:SM00054 Prosite:PS00018 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 EMBL:AB028621 KO:K13448 HOGENOM:HOG000241952
            IPI:IPI00546228 RefSeq:NP_189053.1 UniGene:At.53467 HSSP:P06787
            ProteinModelPortal:Q9LRN6 SMR:Q9LRN6 PRIDE:Q9LRN6
            EnsemblPlants:AT3G24110.1 GeneID:821997 KEGG:ath:AT3G24110
            TAIR:At3g24110 eggNOG:NOG249467 InParanoid:Q9LRN6 OMA:FREFLFA
            PhylomeDB:Q9LRN6 ProtClustDB:CLSN2684359 Genevestigator:Q9LRN6
            Uniprot:Q9LRN6
        Length = 229

 Score = 102 (41.0 bits), Expect = 3.1e-05, P = 3.1e-05
 Identities = 23/50 (46%), Positives = 34/50 (68%)

Query:    18 ETKLEAKMVEAMQRRAAEG-TALKSFNSIILKFPKIDDSLRNCKAIFEKF 66
             + KL  KMVE+  R    G  +LKS +SII+KFPK+ + LRN +++FE +
Sbjct:    18 DAKLARKMVES--RSIYPGHRSLKSMDSIIMKFPKLREGLRNIRSVFESY 65


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.134   0.383    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       80        80   0.00091  102 3  11 22  0.40    29
                                                     29  0.41    30


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  507 (54 KB)
  Total size of DFA:  89 KB (2066 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  8.87u 0.15s 9.02t   Elapsed:  00:00:00
  Total cpu time:  8.87u 0.15s 9.02t   Elapsed:  00:00:00
  Start:  Fri May 10 20:26:43 2013   End:  Fri May 10 20:26:43 2013

Back to top