BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 047174
         (80 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q52K82|CML21_ARATH Probable calcium-binding protein CML21 OS=Arabidopsis thaliana
          GN=CML21 PE=2 SV=1
          Length = 231

 Score =  103 bits (257), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 47/71 (66%), Positives = 57/71 (80%)

Query: 1  MGGIVGKPESTTSAWMPETKLEAKMVEAMQRRAAEGTALKSFNSIILKFPKIDDSLRNCK 60
          MGG V K E+    W+PETKLEAK++EA+QRRA+ GT +KSFNSI+LKFPKIDD LRNCK
Sbjct: 1  MGGAVTKSETLQKEWVPETKLEAKIIEAVQRRASRGTTMKSFNSIVLKFPKIDDGLRNCK 60

Query: 61 AIFEKFGGLQN 71
          AIF++F    N
Sbjct: 61 AIFQEFDEDSN 71


>sp|Q9LRN6|CML22_ARATH Probable calcium-binding protein CML22 OS=Arabidopsis thaliana
          GN=CML22 PE=3 SV=1
          Length = 229

 Score = 42.4 bits (98), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 18 ETKLEAKMVEAMQRRAAEGT-ALKSFNSIILKFPKIDDSLRNCKAIFEKFGGLQN 71
          + KL  KMVE+  R    G  +LKS +SII+KFPK+ + LRN +++FE +    N
Sbjct: 18 DAKLARKMVES--RSIYPGHRSLKSMDSIIMKFPKLREGLRNIRSVFESYDNDTN 70


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.318    0.134    0.383 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,951,566
Number of Sequences: 539616
Number of extensions: 789636
Number of successful extensions: 1909
Number of sequences better than 100.0: 3
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1906
Number of HSP's gapped (non-prelim): 3
length of query: 80
length of database: 191,569,459
effective HSP length: 51
effective length of query: 29
effective length of database: 164,049,043
effective search space: 4757422247
effective search space used: 4757422247
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)