BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047179
(130 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14009|14KD_DAUCA 14 kDa proline-rich protein DC2.15 OS=Daucus carota PE=2 SV=1
Length = 137
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 99/136 (72%), Gaps = 7/136 (5%)
Query: 1 MDSKRSIWITVFLSINIISFALVSGCNTC-------VQPRPIPNPNPNPTSRRCPRDALK 53
M SK S + +F ++NI+ FALVS C +P P P P P P++ +CPRDALK
Sbjct: 1 MGSKNSASVALFFTLNILFFALVSSTEKCPDPYKPKPKPTPKPTPTPYPSAGKCPRDALK 60
Query: 54 LGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISLS 113
LGVCA VL+ V+G+PP PCCS+L+GL++LEAAVCLCTAIKANILG N+N+PI+LS
Sbjct: 61 LGVCADVLNLVHNVVIGSPPTLPCCSLLEGLVNLEAAVCLCTAIKANILGKNLNLPIALS 120
Query: 114 LLINTCGKKLPSDFIC 129
L++N CGK++P+ F C
Sbjct: 121 LVLNNCGKQVPNGFEC 136
>sp|Q8RW93|LBP65_ARATH Putative lipid-binding protein At4g00165 OS=Arabidopsis thaliana
GN=At4g00165 PE=2 SV=1
Length = 128
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 68/98 (69%), Gaps = 2/98 (2%)
Query: 33 RPIPNPNPNPTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVC 92
+P P P + +CPRD LK GVC L G V V+G PP CCS+++GL D EAAVC
Sbjct: 32 KPCPPPPAKQATTKCPRDTLKFGVCGSWL-GLVSEVIGTPPSQECCSLIKGLADFEAAVC 90
Query: 93 LCTAIKANILGIN-INIPISLSLLINTCGKKLPSDFIC 129
LCTA+K +ILG+ + IP++L+LL+N+CGK +P F+C
Sbjct: 91 LCTALKTSILGVAPVKIPVALTLLLNSCGKNVPQGFVC 128
>sp|Q01595|CCDP_MAIZE Cortical cell-delineating protein OS=Zea mays PE=2 SV=1
Length = 129
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 51/87 (58%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
Query: 43 TSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANIL 102
+ RCP DALKL VCAKVL G V VG P CC +L+GL+DL+AA+CLCTAIKAN+L
Sbjct: 44 SHGRCPIDALKLKVCAKVL-GLVK--VGLPQYEQCCPLLEGLVDLDAALCLCTAIKANVL 100
Query: 103 GININIPISLSLLINTCGKKLPSDFIC 129
GI++N+P+SL+ ++N CG+ P DF C
Sbjct: 101 GIHLNVPLSLNFILNNCGRICPEDFTC 127
>sp|Q00451|PRF1_SOLLC 36.4 kDa proline-rich protein OS=Solanum lycopersicum GN=TPRP-F1
PE=2 SV=1
Length = 346
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 55/83 (66%)
Query: 47 CPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGINI 106
CP DALKLG C VL G + +G CC +L GL+DL+AA+CLCT I+ +L INI
Sbjct: 261 CPIDALKLGACVDVLGGLIHIGIGGSAKQTCCPLLGGLVDLDAAICLCTTIRLKLLNINI 320
Query: 107 NIPISLSLLINTCGKKLPSDFIC 129
+PI+L +LI+ CGK P DF C
Sbjct: 321 ILPIALQVLIDDCGKYPPKDFKC 343
>sp|P24337|HPSE_SOYBN Hydrophobic seed protein OS=Glycine max PE=1 SV=1
Length = 80
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 9/77 (11%)
Query: 53 KLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCTAIKANILGININIPISL 112
L +C +L G++G V CC+++ GL D+EA VCLC ++A LGI +N+ +L
Sbjct: 10 DLSICLNILGGSLGTV------DDCCALIGGLGDIEAIVCLCIQLRA--LGI-LNLNRNL 60
Query: 113 SLLINTCGKKLPSDFIC 129
L++N+CG+ PS+ C
Sbjct: 61 QLILNSCGRSYPSNATC 77
>sp|Q6ASY2|NLTL1_ORYSJ Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp.
japonica GN=LTPL1 PE=1 SV=1
Length = 178
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 8/99 (8%)
Query: 17 IISFALVSGCNTCVQPRPIPNPNPNPTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFP 76
++ A V+G + P P P + C +ALKL C + T G + P
Sbjct: 15 VVGLAAVAGVDGATASSPAPAPAVD-----CTAEALKLADCLDYV--TPGKTAPSRPSKL 67
Query: 77 CCSVLQGLLDLEAAV-CLCTAIKANILGININIPISLSL 114
CC ++G L AAV CLC A + L + INI +L L
Sbjct: 68 CCGEVKGALKDSAAVGCLCAAFTSKTLPLPINITRALHL 106
>sp|Q8LD23|GDL4_ARATH GDSL esterase/lipase At1g20120 OS=Arabidopsis thaliana GN=At1g20120
PE=2 SV=2
Length = 402
Score = 32.0 bits (71), Expect = 1.3, Method: Composition-based stats.
Identities = 27/99 (27%), Positives = 36/99 (36%), Gaps = 22/99 (22%)
Query: 31 QPRPIPNPNPNPTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVL-QGLLDLEA 89
+P+P P+P PNP R + FP +LD
Sbjct: 52 EPKPCPSPGPNPAPATTKRT--------------------HNTTFPAIFAFGDSILDTGN 91
Query: 90 AVCLCTAIKANILGININIPISLSLLINTCGKKLPSDFI 128
+ T IKAN L +N P + C K+PSDFI
Sbjct: 92 NDYILTLIKANFLPYGMNFPDKVPTG-RFCNGKIPSDFI 129
>sp|A1WMU7|LGT_VEREI Prolipoprotein diacylglyceryl transferase OS=Verminephrobacter
eiseniae (strain EF01-2) GN=lgt PE=3 SV=1
Length = 277
Score = 30.8 bits (68), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 34/87 (39%), Gaps = 4/87 (4%)
Query: 22 LVSGCNTCVQPRPIPNPNPNPTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVL 81
++ GC P P SR+ D L LGV VL G +G + PD+ L
Sbjct: 34 MLLGCRRLRHPPFAGRTGPGAWSRKDVEDILFLGVAGVVLGGRLGYCLFYKPDYYLGHPL 93
Query: 82 QGLLDLEAAVCLCTAIKANILGININI 108
+ + + A +LG+ + +
Sbjct: 94 EVFALWQGGM----AFHGGLLGVIVAM 116
>sp|Q5VV16|FX4L5_HUMAN Forkhead box protein D4-like 5 OS=Homo sapiens GN=FOXD4L5 PE=2 SV=1
Length = 416
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 10/58 (17%)
Query: 32 PRPIPNPNPNPTSRRCPRDALK------LGVCAKVLDGTV----GAVVGNPPDFPCCS 79
P+P+P PN RCP L L + A V G GA + P FPCCS
Sbjct: 243 PQPVPGAYPNTAPGRCPYALLHPHPLRYLLLSAPVYAGAPKKAEGADLATPAPFPCCS 300
>sp|P97613|PTTG1_RAT Securin OS=Rattus norvegicus GN=Pttg1 PE=1 SV=1
Length = 199
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 19/41 (46%), Gaps = 7/41 (17%)
Query: 39 NPNPTSRRCPRDALKLGVCAKVLDGT-------VGAVVGNP 72
N P SR +D LKLG K LDG VG V G P
Sbjct: 11 NEEPGSRLASKDGLKLGSGVKALDGKLQVSTPRVGKVFGAP 51
>sp|O28084|LEUC2_ARCFU 3-isopropylmalate dehydratase large subunit 2 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=leuC2 PE=3 SV=1
Length = 416
Score = 29.6 bits (65), Expect = 6.0, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 42 PTSRRCPRDALKLGVCAKVLDGTVGAVVGNPPDFPCCSVLQGLLDLEAAVCLCT 95
P SRR AL G+ ++ G +V NP PC + QG+L + VC+ T
Sbjct: 326 PASRRVYLQALDKGLIRVFVEA--GGMVLNPGCGPCVGIHQGIL-ADGEVCIST 376
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.141 0.455
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 51,647,952
Number of Sequences: 539616
Number of extensions: 2151116
Number of successful extensions: 8008
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 7947
Number of HSP's gapped (non-prelim): 47
length of query: 130
length of database: 191,569,459
effective HSP length: 96
effective length of query: 34
effective length of database: 139,766,323
effective search space: 4752054982
effective search space used: 4752054982
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 55 (25.8 bits)