Query 047180
Match_columns 337
No_of_seqs 183 out of 1786
Neff 8.4
Searched_HMMs 46136
Date Fri Mar 29 08:32:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047180.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/047180hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1448 TyrB Aspartate/tyrosin 100.0 5.5E-61 1.2E-65 438.2 29.9 311 26-337 1-312 (396)
2 KOG1411 Aspartate aminotransfe 100.0 1.2E-54 2.7E-59 388.9 23.9 317 21-337 22-339 (427)
3 PTZ00376 aspartate aminotransf 100.0 3.5E-52 7.6E-57 402.5 32.8 312 23-334 1-314 (404)
4 KOG1412 Aspartate aminotransfe 100.0 1.4E-52 3.1E-57 371.1 26.6 313 24-336 3-318 (410)
5 PRK09257 aromatic amino acid a 100.0 1.1E-51 2.5E-56 398.0 34.0 305 27-332 2-307 (396)
6 PLN02397 aspartate transaminas 100.0 4.7E-51 1E-55 396.6 34.5 310 25-334 22-332 (423)
7 COG0436 Aspartate/tyrosine/aro 100.0 2.2E-49 4.7E-54 379.8 26.3 256 51-326 28-285 (393)
8 PLN02368 alanine transaminase 100.0 9.1E-44 2E-48 342.9 27.7 278 38-326 26-342 (407)
9 KOG0257 Kynurenine aminotransf 100.0 9.2E-44 2E-48 328.0 21.7 277 28-326 10-293 (420)
10 PLN02187 rooty/superroot1 100.0 2.4E-42 5.2E-47 338.6 28.7 276 37-325 48-330 (462)
11 PLN00143 tyrosine/nicotianamin 100.0 1.6E-42 3.6E-47 335.5 26.7 274 38-325 19-296 (409)
12 PRK13355 bifunctional HTH-doma 100.0 2.3E-42 4.9E-47 343.7 27.5 286 25-326 118-406 (517)
13 PRK07366 succinyldiaminopimela 100.0 2.6E-42 5.6E-47 332.0 26.7 267 50-335 29-297 (388)
14 PRK09147 succinyldiaminopimela 100.0 2.6E-42 5.6E-47 332.9 26.6 286 30-334 5-301 (396)
15 PLN00175 aminotransferase fami 100.0 2.3E-42 4.9E-47 334.8 26.2 282 27-334 33-316 (413)
16 PTZ00377 alanine aminotransfer 100.0 5.7E-42 1.2E-46 338.2 27.8 230 85-325 107-349 (481)
17 PRK07681 aspartate aminotransf 100.0 5.1E-42 1.1E-46 331.2 26.0 255 50-326 31-287 (399)
18 PRK08637 hypothetical protein; 100.0 2.2E-41 4.7E-46 325.6 30.1 275 51-332 3-291 (388)
19 PLN00145 tyrosine/nicotianamin 100.0 2.2E-41 4.8E-46 329.4 28.6 273 50-335 51-328 (430)
20 PRK06855 aminotransferase; Val 100.0 1.2E-41 2.6E-46 331.6 26.8 265 51-327 32-299 (433)
21 PRK06348 aspartate aminotransf 100.0 1.3E-41 2.8E-46 326.7 25.4 252 51-325 29-281 (384)
22 PRK08636 aspartate aminotransf 100.0 1.6E-41 3.4E-46 328.1 25.6 279 30-325 10-295 (403)
23 COG1168 MalY Bifunctional PLP- 100.0 2E-41 4.4E-46 309.7 24.6 264 51-337 25-290 (388)
24 PRK09276 LL-diaminopimelate am 100.0 2.1E-41 4.6E-46 325.3 26.1 256 50-325 30-286 (385)
25 PLN02656 tyrosine transaminase 100.0 5.3E-41 1.2E-45 325.0 28.1 271 49-335 29-307 (409)
26 PRK06290 aspartate aminotransf 100.0 3.8E-41 8.2E-46 325.8 25.8 264 50-335 43-308 (410)
27 TIGR03538 DapC_gpp succinyldia 100.0 6.7E-41 1.5E-45 322.7 26.4 281 36-335 10-301 (393)
28 PLN02231 alanine transaminase 100.0 1.1E-40 2.4E-45 330.9 28.3 261 50-325 128-401 (534)
29 TIGR03540 DapC_direct LL-diami 100.0 8.8E-41 1.9E-45 320.8 25.9 258 49-326 27-285 (383)
30 TIGR01264 tyr_amTase_E tyrosin 100.0 1.4E-40 3.1E-45 321.3 27.4 276 36-325 14-292 (401)
31 PRK08068 transaminase; Reviewe 100.0 1.2E-40 2.7E-45 320.5 26.4 263 51-333 32-296 (389)
32 PRK06207 aspartate aminotransf 100.0 7.9E-41 1.7E-45 323.4 25.1 255 51-325 39-298 (405)
33 PTZ00433 tyrosine aminotransfe 100.0 2.2E-40 4.9E-45 321.0 27.1 276 37-325 18-301 (412)
34 PRK08960 hypothetical protein; 100.0 1.7E-40 3.7E-45 319.3 25.9 270 31-325 10-281 (387)
35 PRK09148 aminotransferase; Val 100.0 2.6E-40 5.7E-45 319.8 25.8 265 50-335 29-296 (405)
36 PRK12414 putative aminotransfe 100.0 1.5E-40 3.2E-45 319.5 23.6 274 29-327 10-284 (384)
37 PRK05942 aspartate aminotransf 100.0 3.5E-40 7.5E-45 317.9 26.0 265 50-334 34-300 (394)
38 PLN02450 1-aminocyclopropane-1 100.0 4.9E-40 1.1E-44 322.8 27.3 264 52-335 39-328 (468)
39 PRK05839 hypothetical protein; 100.0 5.6E-40 1.2E-44 314.3 25.1 273 40-336 13-290 (374)
40 PRK08912 hypothetical protein; 100.0 6.4E-40 1.4E-44 315.2 25.5 286 22-334 2-289 (387)
41 PRK07590 L,L-diaminopimelate a 100.0 9.1E-40 2E-44 316.4 25.4 252 50-325 33-308 (409)
42 PRK07682 hypothetical protein; 100.0 8.1E-40 1.8E-44 313.6 24.8 255 51-326 20-274 (378)
43 PLN02376 1-aminocyclopropane-1 100.0 2.2E-39 4.7E-44 319.6 28.2 285 31-335 20-335 (496)
44 PLN02607 1-aminocyclopropane-1 100.0 2.7E-39 5.8E-44 315.6 27.2 267 49-335 44-335 (447)
45 PRK07337 aminotransferase; Val 100.0 1.6E-39 3.5E-44 312.6 24.9 253 49-326 28-280 (388)
46 PRK07683 aminotransferase A; V 100.0 3.3E-39 7.1E-44 310.4 25.7 253 51-326 28-281 (387)
47 PRK05957 aspartate aminotransf 100.0 8.2E-39 1.8E-43 307.8 26.2 262 51-335 27-291 (389)
48 PRK08363 alanine aminotransfer 100.0 1.1E-38 2.4E-43 307.8 26.7 271 50-335 29-300 (398)
49 PRK09082 methionine aminotrans 100.0 4.8E-39 1E-43 309.1 23.9 262 51-333 30-292 (386)
50 PRK07309 aromatic amino acid a 100.0 1.8E-38 3.8E-43 305.7 26.9 274 30-326 11-285 (391)
51 KOG0259 Tyrosine aminotransfer 100.0 1.9E-38 4E-43 288.5 25.1 279 36-330 42-332 (447)
52 PRK07550 hypothetical protein; 100.0 1.8E-38 4E-43 305.0 26.6 268 37-325 13-283 (386)
53 PRK15481 transcriptional regul 100.0 3.7E-39 7.9E-44 314.2 22.0 246 51-328 85-331 (431)
54 PRK06108 aspartate aminotransf 100.0 1.7E-38 3.6E-43 304.5 25.9 256 51-326 24-280 (382)
55 TIGR03537 DapC succinyldiamino 100.0 2.1E-38 4.5E-43 300.9 25.2 256 53-333 2-261 (350)
56 PRK09275 aspartate aminotransf 100.0 5E-39 1.1E-43 315.9 21.5 264 52-335 101-411 (527)
57 TIGR01265 tyr_nico_aTase tyros 100.0 4.5E-38 9.8E-43 304.0 27.3 286 37-334 15-305 (403)
58 PRK07324 transaminase; Validat 100.0 1.3E-38 2.8E-43 304.9 23.0 244 50-325 25-269 (373)
59 PRK09265 aminotransferase AlaT 100.0 5.3E-38 1.1E-42 303.7 27.3 264 49-327 31-294 (404)
60 PRK06107 aspartate aminotransf 100.0 3.2E-38 6.8E-43 305.0 25.3 255 50-325 32-288 (402)
61 PF00155 Aminotran_1_2: Aminot 100.0 8.6E-39 1.9E-43 304.3 19.2 269 52-336 2-277 (363)
62 COG1167 ARO8 Transcriptional r 100.0 2.8E-38 6.2E-43 309.1 22.9 262 51-335 89-354 (459)
63 PRK07777 aminotransferase; Val 100.0 1.1E-37 2.3E-42 299.9 26.4 272 30-325 6-279 (387)
64 TIGR03542 DAPAT_plant LL-diami 100.0 1.2E-37 2.5E-42 301.1 24.6 261 40-326 21-302 (402)
65 PRK08175 aminotransferase; Val 100.0 2.8E-37 6.1E-42 297.7 26.7 256 50-325 28-284 (395)
66 PRK02610 histidinol-phosphate 100.0 2.8E-37 6E-42 295.7 26.4 246 51-326 28-280 (374)
67 PRK05764 aspartate aminotransf 100.0 2.1E-37 4.5E-42 298.3 25.5 280 23-324 1-284 (393)
68 PRK07568 aspartate aminotransf 100.0 3.2E-37 7E-42 297.3 26.8 261 51-334 30-292 (397)
69 PRK01533 histidinol-phosphate 100.0 4.6E-38 1E-42 300.1 20.7 248 51-334 29-276 (366)
70 PRK07865 N-succinyldiaminopime 100.0 1.3E-37 2.8E-42 296.9 23.5 268 25-331 2-276 (364)
71 PRK08361 aspartate aminotransf 100.0 1.4E-37 3E-42 299.5 23.7 254 51-327 33-286 (391)
72 PRK14809 histidinol-phosphate 100.0 1.3E-36 2.9E-41 289.2 25.8 258 38-333 18-275 (357)
73 TIGR03801 asp_4_decarbox aspar 100.0 5.9E-37 1.3E-41 300.8 21.9 217 52-286 95-325 (521)
74 PRK06358 threonine-phosphate d 100.0 1.7E-36 3.7E-41 288.3 23.7 246 51-330 19-264 (354)
75 PRK09440 avtA valine--pyruvate 100.0 9.9E-37 2.2E-41 295.8 22.3 259 50-332 29-302 (416)
76 PRK03317 histidinol-phosphate 100.0 2.1E-36 4.5E-41 289.0 23.2 245 52-326 27-274 (368)
77 PRK06836 aspartate aminotransf 100.0 1.6E-35 3.4E-40 285.5 27.3 262 51-333 33-306 (394)
78 PRK05166 histidinol-phosphate 100.0 5.2E-36 1.1E-40 286.6 22.8 252 50-334 35-286 (371)
79 TIGR03539 DapC_actino succinyl 100.0 5.7E-36 1.2E-40 284.9 22.9 255 38-331 9-270 (357)
80 PRK09105 putative aminotransfe 100.0 3.2E-36 6.9E-41 287.9 20.7 281 6-335 4-287 (370)
81 PRK07392 threonine-phosphate d 100.0 9.6E-36 2.1E-40 283.6 23.3 242 51-330 22-266 (360)
82 PRK03158 histidinol-phosphate 100.0 1.1E-35 2.4E-40 283.0 22.2 246 51-332 29-274 (359)
83 COG0079 HisC Histidinol-phosph 100.0 1.9E-35 4.1E-40 279.3 22.8 241 51-331 22-263 (356)
84 PRK08056 threonine-phosphate d 100.0 3.8E-35 8.3E-40 279.1 25.0 247 51-333 20-266 (356)
85 PRK05387 histidinol-phosphate 100.0 1.4E-35 3.1E-40 281.4 21.7 243 51-334 24-267 (353)
86 PRK08153 histidinol-phosphate 100.0 2.4E-35 5.2E-40 281.8 22.2 247 50-334 31-277 (369)
87 PRK03967 histidinol-phosphate 100.0 6.7E-35 1.5E-39 275.5 24.0 241 51-335 18-259 (337)
88 PRK04870 histidinol-phosphate 100.0 5.2E-35 1.1E-39 278.1 23.3 246 51-335 26-272 (356)
89 PLN03026 histidinol-phosphate 100.0 7.6E-35 1.6E-39 279.4 23.0 244 51-335 52-295 (380)
90 PRK14808 histidinol-phosphate 100.0 1E-34 2.2E-39 274.1 23.5 236 51-333 19-255 (335)
91 PLN02672 methionine S-methyltr 100.0 6E-35 1.3E-39 303.2 23.6 231 50-298 696-935 (1082)
92 KOG0256 1-aminocyclopropane-1- 100.0 1.6E-33 3.5E-38 258.4 21.7 237 86-336 114-360 (471)
93 PRK05664 threonine-phosphate d 100.0 1.8E-33 4E-38 265.0 21.8 228 52-336 21-248 (330)
94 PRK14807 histidinol-phosphate 100.0 5.9E-33 1.3E-37 263.6 24.5 238 51-327 22-260 (351)
95 PRK08354 putative aminotransfe 100.0 4.6E-33 1E-37 260.1 23.1 217 51-325 8-224 (311)
96 PRK04781 histidinol-phosphate 100.0 4.4E-33 9.5E-38 265.8 21.4 212 86-326 53-266 (364)
97 PRK06225 aspartate aminotransf 100.0 7.7E-33 1.7E-37 265.5 23.2 242 51-325 28-271 (380)
98 PRK01688 histidinol-phosphate 100.0 3.7E-33 8.1E-38 265.0 19.4 208 86-326 51-259 (351)
99 PRK03321 putative aminotransfe 100.0 8.8E-33 1.9E-37 262.3 20.5 240 51-325 22-261 (352)
100 PRK02731 histidinol-phosphate 100.0 3.6E-32 7.9E-37 259.5 22.9 247 50-332 31-277 (367)
101 PRK06959 putative threonine-ph 100.0 4E-32 8.7E-37 256.7 20.3 205 88-336 50-254 (339)
102 PRK04635 histidinol-phosphate 100.0 2.5E-32 5.4E-37 259.6 18.4 206 86-326 54-260 (354)
103 PRK07908 hypothetical protein; 100.0 4.9E-31 1.1E-35 250.2 23.9 229 50-325 21-249 (349)
104 PRK06425 histidinol-phosphate 100.0 2.5E-31 5.4E-36 250.7 21.2 182 87-297 35-216 (332)
105 PRK00950 histidinol-phosphate 100.0 8.2E-31 1.8E-35 249.5 24.4 238 52-330 35-273 (361)
106 TIGR01140 L_thr_O3P_dcar L-thr 100.0 5.7E-31 1.2E-35 248.0 22.6 244 37-333 4-247 (330)
107 TIGR01141 hisC histidinol-phos 100.0 4.7E-31 1E-35 249.8 21.6 239 51-327 19-257 (346)
108 KOG0634 Aromatic amino acid am 100.0 2E-28 4.4E-33 226.6 18.0 238 85-337 92-355 (472)
109 PRK13238 tnaA tryptophanase/L- 99.9 3.9E-26 8.5E-31 223.3 23.0 271 30-325 16-311 (460)
110 KOG0258 Alanine aminotransfera 99.9 3.7E-26 8.1E-31 208.7 20.5 257 69-335 87-360 (475)
111 cd00609 AAT_like Aspartate ami 99.9 1.1E-24 2.4E-29 205.0 22.9 250 54-326 1-253 (350)
112 KOG0633 Histidinol phosphate a 99.9 8.5E-25 1.8E-29 190.5 12.3 196 114-333 84-282 (375)
113 cd00617 Tnase_like Tryptophana 99.9 1.3E-22 2.9E-27 196.2 20.9 223 50-298 10-258 (431)
114 PRK07049 methionine gamma-lyas 99.9 1.4E-21 3.1E-26 189.8 23.1 196 94-325 84-289 (427)
115 COG3977 Alanine-alpha-ketoisov 99.9 1.6E-21 3.4E-26 173.2 18.4 262 37-329 15-299 (417)
116 TIGR00858 bioF 8-amino-7-oxono 99.9 1.8E-20 3.8E-25 177.7 23.4 215 50-297 15-237 (360)
117 TIGR01822 2am3keto_CoA 2-amino 99.9 1.6E-20 3.4E-25 180.8 22.6 212 51-297 38-261 (393)
118 PRK10534 L-threonine aldolase; 99.9 4.6E-21 1E-25 180.6 17.7 231 66-325 8-244 (333)
119 cd06502 TA_like Low-specificit 99.9 2E-20 4.2E-25 176.3 21.4 229 69-326 9-244 (338)
120 TIGR01825 gly_Cac_T_rel pyrido 99.9 4.3E-20 9.4E-25 177.2 22.3 242 50-324 32-278 (385)
121 PLN02721 threonine aldolase 99.9 5.1E-20 1.1E-24 174.5 20.7 215 52-297 6-229 (353)
122 PRK06939 2-amino-3-ketobutyrat 99.9 6.1E-20 1.3E-24 176.6 20.9 218 50-297 41-265 (397)
123 TIGR03576 pyridox_MJ0158 pyrid 99.8 1.4E-19 3.1E-24 171.3 22.2 191 95-325 56-249 (346)
124 PLN02242 methionine gamma-lyas 99.8 7.4E-20 1.6E-24 177.3 19.7 191 94-325 77-273 (418)
125 PRK05958 8-amino-7-oxononanoat 99.8 5.4E-19 1.2E-23 169.3 23.7 215 49-297 37-259 (385)
126 PRK06234 methionine gamma-lyas 99.8 4.1E-19 9E-24 171.5 22.0 196 89-325 58-262 (400)
127 TIGR00707 argD acetylornithine 99.8 5.6E-19 1.2E-23 169.2 21.2 243 51-324 27-284 (379)
128 PLN02822 serine palmitoyltrans 99.8 4.8E-19 1E-23 174.6 18.0 236 51-324 109-361 (481)
129 cd06452 SepCysS Sep-tRNA:Cys-t 99.8 2.3E-18 4.9E-23 164.2 21.1 173 95-296 46-222 (361)
130 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 1.6E-18 3.5E-23 165.9 19.9 174 95-298 53-231 (370)
131 PRK02627 acetylornithine amino 99.8 1.9E-18 4.1E-23 166.5 20.5 244 51-324 39-296 (396)
132 cd00613 GDC-P Glycine cleavage 99.8 1.6E-18 3.5E-23 167.0 18.5 204 52-285 21-238 (398)
133 cd06454 KBL_like KBL_like; thi 99.8 8.2E-18 1.8E-22 159.0 21.5 172 96-298 49-223 (349)
134 PRK08045 cystathionine gamma-s 99.8 1.7E-17 3.8E-22 159.3 22.0 191 93-325 52-247 (386)
135 TIGR03392 FeS_syn_CsdA cystein 99.8 1.1E-17 2.3E-22 161.6 20.2 201 52-285 16-231 (398)
136 PRK06460 hypothetical protein; 99.8 1E-17 2.2E-22 160.6 19.4 167 93-298 45-216 (376)
137 PLN02483 serine palmitoyltrans 99.8 2.6E-17 5.6E-22 162.7 22.3 217 51-297 100-331 (489)
138 TIGR02080 O_succ_thio_ly O-suc 99.8 2E-17 4.3E-22 158.7 20.8 192 94-324 52-245 (382)
139 cd00378 SHMT Serine-glycine hy 99.8 1.6E-17 3.5E-22 160.4 19.4 228 37-298 6-247 (402)
140 PRK08249 cystathionine gamma-s 99.8 2.7E-17 5.9E-22 158.6 20.7 190 94-325 65-258 (398)
141 PRK07504 O-succinylhomoserine 99.8 3.1E-17 6.7E-22 158.3 21.1 190 94-325 66-260 (398)
142 PRK08133 O-succinylhomoserine 99.8 4.2E-17 9.2E-22 157.0 21.9 166 95-298 63-232 (390)
143 PRK08776 cystathionine gamma-s 99.8 4.1E-17 8.8E-22 157.6 21.8 189 95-325 62-255 (405)
144 TIGR00713 hemL glutamate-1-sem 99.8 3.2E-17 6.9E-22 159.6 21.2 248 51-324 48-311 (423)
145 cd00615 Orn_deC_like Ornithine 99.8 1.7E-17 3.6E-22 153.9 16.3 185 93-301 58-248 (294)
146 PRK03244 argD acetylornithine 99.8 5.6E-17 1.2E-21 156.6 19.3 243 51-324 43-297 (398)
147 PRK07811 cystathionine gamma-s 99.7 1.4E-16 2.9E-21 153.4 21.3 168 91-296 59-231 (388)
148 PRK13392 5-aminolevulinate syn 99.7 9.4E-17 2E-21 155.7 20.1 236 53-325 48-294 (410)
149 PRK07582 cystathionine gamma-l 99.7 1E-16 2.3E-21 153.1 19.7 192 91-328 49-245 (366)
150 TIGR01328 met_gam_lyase methio 99.7 1.4E-16 3.1E-21 153.3 20.8 166 95-298 61-230 (391)
151 PRK06767 methionine gamma-lyas 99.7 2.4E-16 5.3E-21 151.6 22.2 191 93-325 61-256 (386)
152 PRK01278 argD acetylornithine 99.7 7.8E-17 1.7E-21 155.2 18.8 186 121-324 91-289 (389)
153 PRK10874 cysteine sulfinate de 99.7 9.5E-17 2.1E-21 155.1 19.2 171 95-295 65-241 (401)
154 PRK07503 methionine gamma-lyas 99.7 1.6E-16 3.4E-21 153.6 20.6 191 94-325 66-261 (403)
155 cd00610 OAT_like Acetyl ornith 99.7 1.5E-16 3.3E-21 154.0 20.4 252 51-324 36-307 (413)
156 PRK02948 cysteine desulfurase; 99.7 5.4E-17 1.2E-21 155.8 17.0 199 96-325 46-250 (381)
157 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 4.8E-17 1E-21 158.0 15.3 156 95-286 59-218 (418)
158 TIGR01437 selA_rel uncharacter 99.7 4.3E-16 9.3E-21 148.7 21.6 203 51-296 8-229 (363)
159 TIGR01976 am_tr_V_VC1184 cyste 99.7 2.3E-16 5E-21 152.1 19.2 196 69-295 28-236 (397)
160 PRK08247 cystathionine gamma-s 99.7 5.7E-16 1.2E-20 148.0 21.2 188 94-324 53-245 (366)
161 PRK07179 hypothetical protein; 99.7 8.8E-16 1.9E-20 148.7 22.7 168 95-295 101-269 (407)
162 PRK09295 bifunctional cysteine 99.7 4E-16 8.7E-21 151.0 19.6 164 95-285 69-238 (406)
163 cd06450 DOPA_deC_like DOPA dec 99.7 1.8E-16 3.8E-21 149.9 16.4 201 72-285 13-229 (345)
164 TIGR01979 sufS cysteine desulf 99.7 7.3E-16 1.6E-20 148.9 18.9 165 94-285 63-233 (403)
165 PRK11658 UDP-4-amino-4-deoxy-L 99.7 8.1E-16 1.7E-20 147.7 18.6 170 94-298 34-205 (379)
166 PRK09331 Sep-tRNA:Cys-tRNA syn 99.7 1.4E-15 3E-20 146.5 20.3 174 94-296 64-241 (387)
167 TIGR03403 nifS_epsilon cystein 99.7 3.3E-16 7.1E-21 150.4 15.4 193 68-285 9-214 (382)
168 TIGR01325 O_suc_HS_sulf O-succ 99.7 2.4E-15 5.3E-20 144.4 21.4 167 94-298 55-225 (380)
169 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 1.8E-15 3.9E-20 143.3 20.2 199 68-297 8-209 (355)
170 PRK07050 cystathionine beta-ly 99.7 1.5E-15 3.2E-20 146.4 19.7 189 95-325 67-260 (394)
171 PRK13479 2-aminoethylphosphona 99.7 1.4E-15 2.9E-20 145.3 18.9 175 94-297 38-215 (368)
172 TIGR02379 ECA_wecE TDP-4-keto- 99.7 1.6E-15 3.5E-20 145.3 19.2 171 97-298 31-205 (376)
173 PRK07810 O-succinylhomoserine 99.7 2.8E-15 6E-20 144.9 20.8 189 94-325 71-265 (403)
174 PRK05939 hypothetical protein; 99.7 1.7E-15 3.6E-20 146.1 18.8 162 87-285 39-206 (397)
175 PF12897 Aminotran_MocR: Alani 99.7 6.6E-15 1.4E-19 136.2 21.8 222 85-327 60-302 (425)
176 PLN02855 Bifunctional selenocy 99.7 2E-15 4.4E-20 147.0 19.2 164 95-285 78-247 (424)
177 cd00614 CGS_like CGS_like: Cys 99.7 4.5E-15 9.7E-20 142.0 21.2 192 92-325 39-235 (369)
178 cd01494 AAT_I Aspartate aminot 99.7 1.2E-15 2.6E-20 128.4 15.3 166 96-285 3-169 (170)
179 PRK08861 cystathionine gamma-s 99.7 5.2E-15 1.1E-19 142.1 21.5 190 94-325 54-248 (388)
180 PRK08574 cystathionine gamma-s 99.7 5.6E-15 1.2E-19 142.0 20.7 166 94-297 54-223 (385)
181 cd06451 AGAT_like Alanine-glyo 99.7 2.9E-15 6.2E-20 142.3 18.2 196 68-296 8-207 (356)
182 PLN02409 serine--glyoxylate am 99.7 2.9E-15 6.2E-20 144.9 18.3 202 68-296 18-222 (401)
183 PRK00451 glycine dehydrogenase 99.7 2.9E-15 6.3E-20 146.9 17.4 201 52-285 69-282 (447)
184 PRK08248 O-acetylhomoserine am 99.7 2.8E-15 6.2E-20 145.8 17.0 156 95-286 66-225 (431)
185 cd06453 SufS_like Cysteine des 99.7 3.8E-15 8.2E-20 142.4 17.7 172 95-296 45-221 (373)
186 PRK08088 4-aminobutyrate amino 99.7 1.2E-14 2.6E-19 141.6 20.8 250 51-325 41-314 (425)
187 PRK09064 5-aminolevulinate syn 99.6 2E-14 4.3E-19 139.2 21.4 214 51-297 46-268 (407)
188 PRK02936 argD acetylornithine 99.6 2.3E-14 5.1E-19 137.3 21.1 246 51-325 29-282 (377)
189 TIGR01821 5aminolev_synth 5-am 99.6 2.1E-14 4.6E-19 138.8 20.8 236 52-324 46-292 (402)
190 PRK04073 rocD ornithine--oxo-a 99.6 3.4E-14 7.3E-19 137.2 21.5 185 121-324 100-301 (396)
191 PRK05093 argD bifunctional N-s 99.6 1.7E-14 3.7E-19 139.6 19.3 178 121-324 100-298 (403)
192 PRK06084 O-acetylhomoserine am 99.6 7.3E-15 1.6E-19 142.8 16.5 156 95-286 60-219 (425)
193 PRK08064 cystathionine beta-ly 99.6 3E-14 6.5E-19 137.2 19.7 164 95-297 56-224 (390)
194 PRK07505 hypothetical protein; 99.6 4.4E-14 9.6E-19 136.7 20.8 236 51-324 46-297 (402)
195 PRK06702 O-acetylhomoserine am 99.6 2.6E-14 5.6E-19 138.6 19.0 155 95-284 63-231 (432)
196 PRK07671 cystathionine beta-ly 99.6 6.1E-14 1.3E-18 134.5 20.4 164 95-297 52-220 (377)
197 PRK09028 cystathionine beta-ly 99.6 7.3E-14 1.6E-18 134.2 20.5 196 87-325 53-255 (394)
198 TIGR02326 transamin_PhnW 2-ami 99.6 1.2E-13 2.6E-18 131.7 21.3 171 96-295 38-211 (363)
199 PLN03227 serine palmitoyltrans 99.6 7.1E-14 1.5E-18 134.7 19.9 180 89-296 39-229 (392)
200 TIGR03531 selenium_SpcS O-phos 99.6 1.6E-13 3.4E-18 133.1 22.0 186 121-325 126-318 (444)
201 TIGR01977 am_tr_V_EF2568 cyste 99.6 5.3E-14 1.1E-18 134.6 18.7 165 93-285 44-212 (376)
202 TIGR03588 PseC UDP-4-keto-6-de 99.6 1.3E-13 2.9E-18 132.4 21.1 176 92-297 28-207 (380)
203 TIGR01329 cysta_beta_ly_E cyst 99.6 1.4E-13 3.1E-18 132.0 21.2 171 87-297 39-217 (378)
204 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.6 4.3E-14 9.2E-19 135.6 17.4 174 95-298 29-204 (375)
205 PRK07269 cystathionine gamma-s 99.6 1.7E-13 3.7E-18 130.7 20.2 192 93-325 54-246 (364)
206 PRK00011 glyA serine hydroxyme 99.6 1.5E-13 3.2E-18 133.5 19.8 154 123-298 92-251 (416)
207 PRK13393 5-aminolevulinate syn 99.6 3.4E-13 7.4E-18 130.6 22.3 196 95-324 92-292 (406)
208 PLN02509 cystathionine beta-ly 99.6 2.9E-13 6.2E-18 132.4 21.1 173 86-295 124-301 (464)
209 PRK05968 hypothetical protein; 99.6 2.9E-13 6.2E-18 130.4 20.3 188 95-325 65-257 (389)
210 PRK15407 lipopolysaccharide bi 99.6 3.2E-13 6.9E-18 131.9 20.7 170 95-297 65-243 (438)
211 PRK13520 L-tyrosine decarboxyl 99.6 3.8E-13 8.3E-18 128.3 20.7 178 96-295 62-241 (371)
212 TIGR03235 DNA_S_dndA cysteine 99.6 1.2E-13 2.5E-18 131.3 16.7 163 95-285 44-212 (353)
213 PRK12381 bifunctional succinyl 99.6 5.2E-13 1.1E-17 129.4 21.1 184 121-323 99-296 (406)
214 PRK06176 cystathionine gamma-s 99.6 3.7E-13 8.1E-18 129.1 19.7 165 95-297 52-220 (380)
215 PRK14012 cysteine desulfurase; 99.5 8.6E-14 1.9E-18 134.7 15.0 164 95-286 51-219 (404)
216 TIGR01324 cysta_beta_ly_B cyst 99.5 1.1E-12 2.3E-17 125.8 22.2 171 87-297 42-220 (377)
217 PRK04260 acetylornithine amino 99.5 1.6E-12 3.4E-17 124.7 23.3 240 51-325 29-280 (375)
218 TIGR03812 tyr_de_CO2_Arch tyro 99.5 2.8E-13 6.1E-18 129.4 16.9 179 96-296 62-247 (373)
219 PRK05994 O-acetylhomoserine am 99.5 3.5E-13 7.7E-18 131.2 17.0 155 95-285 65-223 (427)
220 TIGR03402 FeS_nifS cysteine de 99.5 7.1E-13 1.5E-17 127.1 18.2 162 96-285 45-210 (379)
221 PRK00854 rocD ornithine--oxo-a 99.5 2.2E-12 4.8E-17 124.7 21.7 187 121-324 101-302 (401)
222 PRK04366 glycine dehydrogenase 99.5 9.2E-13 2E-17 130.2 19.2 202 56-285 73-289 (481)
223 PRK05967 cystathionine beta-ly 99.5 2.7E-12 5.9E-17 123.2 21.6 171 122-325 83-258 (395)
224 TIGR02006 IscS cysteine desulf 99.5 3.4E-13 7.3E-18 130.5 15.5 164 94-285 48-216 (402)
225 PTZ00125 ornithine aminotransf 99.5 2.4E-12 5.1E-17 124.4 20.8 188 121-324 91-293 (400)
226 PRK00062 glutamate-1-semialdeh 99.5 9.3E-13 2E-17 128.4 17.8 245 51-324 50-313 (426)
227 cd00616 AHBA_syn 3-amino-5-hyd 99.5 2.9E-12 6.3E-17 121.3 18.7 171 93-297 18-190 (352)
228 PRK08360 4-aminobutyrate amino 99.4 5E-11 1.1E-15 116.7 22.3 187 121-324 104-318 (443)
229 PRK09792 4-aminobutyrate trans 99.4 5.3E-11 1.2E-15 115.9 21.9 190 121-327 104-318 (421)
230 PLN00144 acetylornithine trans 99.4 3.4E-11 7.4E-16 115.8 19.1 190 121-328 75-288 (382)
231 TIGR01885 Orn_aminotrans ornit 99.4 1E-10 2.3E-15 113.1 22.2 183 121-324 97-301 (401)
232 PLN02651 cysteine desulfurase 99.4 2.4E-11 5.3E-16 116.0 17.3 163 95-285 45-212 (364)
233 PRK05937 8-amino-7-oxononanoat 99.4 8.8E-11 1.9E-15 112.4 20.9 204 51-279 4-220 (370)
234 PLN02624 ornithine-delta-amino 99.3 1.3E-10 2.8E-15 114.8 21.6 205 95-324 119-339 (474)
235 TIGR03246 arg_catab_astC succi 99.3 1.1E-10 2.3E-15 113.0 20.5 185 121-324 95-293 (397)
236 PRK08134 O-acetylhomoserine am 99.3 4.1E-11 8.8E-16 116.8 16.5 155 95-285 66-224 (433)
237 PRK06777 4-aminobutyrate amino 99.3 4.8E-10 1E-14 109.2 21.9 186 121-324 104-312 (421)
238 PRK06918 4-aminobutyrate amino 99.3 7.9E-10 1.7E-14 108.6 21.7 188 121-324 118-333 (451)
239 PF01041 DegT_DnrJ_EryC1: DegT 99.3 1.3E-10 2.8E-15 111.0 15.8 170 95-298 27-198 (363)
240 PRK04612 argD acetylornithine 99.3 5.9E-10 1.3E-14 108.0 20.5 186 121-324 101-301 (408)
241 PRK07812 O-acetylhomoserine am 99.3 1.7E-10 3.8E-15 112.4 16.8 156 95-285 71-230 (436)
242 TIGR00700 GABAtrnsam 4-aminobu 99.3 1.5E-09 3.3E-14 105.6 23.3 187 121-323 97-310 (420)
243 TIGR02618 tyr_phenol_ly tyrosi 99.3 5.8E-10 1.3E-14 107.5 19.5 204 72-299 50-277 (450)
244 COG0399 WecE Predicted pyridox 99.2 8.2E-10 1.8E-14 104.5 19.2 170 95-298 36-207 (374)
245 PLN02955 8-amino-7-oxononanoat 99.2 1.8E-09 3.9E-14 105.3 21.5 174 96-297 150-339 (476)
246 PRK07495 4-aminobutyrate amino 99.2 1.2E-09 2.5E-14 106.6 19.7 185 121-323 104-311 (425)
247 PLN02994 1-aminocyclopropane-1 99.2 1.6E-10 3.4E-15 96.5 10.2 116 32-156 18-153 (153)
248 PF01212 Beta_elim_lyase: Beta 99.2 7.1E-10 1.5E-14 102.4 14.6 207 70-301 7-220 (290)
249 PRK04311 selenocysteine syntha 99.1 5.5E-09 1.2E-13 102.5 20.7 218 51-297 79-314 (464)
250 COG0520 csdA Selenocysteine ly 99.1 7.8E-09 1.7E-13 99.8 18.0 164 95-285 68-237 (405)
251 PRK05613 O-acetylhomoserine am 99.1 4.9E-09 1.1E-13 102.3 16.6 156 95-285 71-230 (437)
252 TIGR00709 dat 2,4-diaminobutyr 99.1 3.1E-08 6.8E-13 97.1 21.9 186 121-324 105-319 (442)
253 PRK06058 4-aminobutyrate amino 99.1 3.8E-08 8.3E-13 96.5 22.6 231 71-324 74-333 (443)
254 TIGR00474 selA seryl-tRNA(sec) 99.1 2.6E-08 5.7E-13 97.5 20.7 214 52-294 75-306 (454)
255 PF01053 Cys_Met_Meta_PP: Cys/ 99.0 4.5E-08 9.8E-13 93.9 20.8 197 87-325 47-252 (386)
256 PRK13237 tyrosine phenol-lyase 99.0 5E-08 1.1E-12 94.4 20.0 189 88-298 73-283 (460)
257 COG2008 GLY1 Threonine aldolas 99.0 5E-08 1.1E-12 90.2 18.2 229 68-325 10-247 (342)
258 PRK08117 4-aminobutyrate amino 99.0 7.4E-08 1.6E-12 94.3 20.2 189 121-324 106-321 (433)
259 PRK08114 cystathionine beta-ly 98.9 1.3E-07 2.7E-12 91.1 20.3 172 121-325 80-258 (395)
260 TIGR02407 ectoine_ectB diamino 98.9 2.7E-07 5.8E-12 89.7 22.1 156 122-285 103-277 (412)
261 PRK05964 adenosylmethionine--8 98.9 1E-07 2.2E-12 93.0 18.7 166 121-296 105-291 (423)
262 PRK06434 cystathionine gamma-l 98.9 1.2E-07 2.6E-12 91.1 18.4 161 96-297 67-232 (384)
263 PRK09264 diaminobutyrate--2-ox 98.9 4.8E-07 1E-11 88.4 22.0 156 122-285 107-281 (425)
264 COG0156 BioF 7-keto-8-aminopel 98.9 6.3E-07 1.4E-11 85.6 21.7 219 51-299 39-264 (388)
265 PF00266 Aminotran_5: Aminotra 98.9 4.4E-07 9.6E-12 86.8 21.0 171 96-296 46-221 (371)
266 PF01276 OKR_DC_1: Orn/Lys/Arg 98.9 2.7E-08 5.8E-13 95.6 12.2 171 121-303 85-271 (417)
267 PRK13034 serine hydroxymethylt 98.8 5.6E-07 1.2E-11 87.6 21.5 219 36-292 14-248 (416)
268 PRK02769 histidine decarboxyla 98.8 7.7E-08 1.7E-12 92.4 15.1 155 121-285 87-244 (380)
269 PF04864 Alliinase_C: Allinase 98.8 1.7E-08 3.7E-13 92.8 9.7 193 95-324 45-241 (363)
270 KOG1549 Cysteine desulfurase N 98.8 2.1E-07 4.4E-12 88.4 16.8 202 50-286 41-256 (428)
271 PLN03032 serine decarboxylase; 98.8 8.3E-08 1.8E-12 91.7 14.2 155 121-285 88-247 (374)
272 PRK06541 hypothetical protein; 98.8 1E-06 2.2E-11 86.9 21.7 163 121-296 115-312 (460)
273 COG0626 MetC Cystathionine bet 98.8 1.7E-06 3.7E-11 82.6 22.0 191 96-325 66-260 (396)
274 PF06838 Met_gamma_lyase: Meth 98.8 1.1E-06 2.3E-11 81.8 18.8 159 123-301 77-250 (403)
275 PRK03715 argD acetylornithine 98.7 2E-06 4.3E-11 83.2 20.6 212 51-285 36-261 (395)
276 PRK08593 4-aminobutyrate amino 98.7 2.2E-06 4.9E-11 84.1 21.2 188 121-323 106-320 (445)
277 TIGR01788 Glu-decarb-GAD gluta 98.7 7.5E-07 1.6E-11 86.9 16.7 156 118-285 101-274 (431)
278 PRK15029 arginine decarboxylas 98.7 1E-06 2.3E-11 90.6 17.5 192 92-303 203-418 (755)
279 PLN02263 serine decarboxylase 98.6 3.9E-07 8.4E-12 89.0 13.2 180 94-285 130-314 (470)
280 KOG0053 Cystathionine beta-lya 98.6 9.3E-07 2E-11 83.8 15.1 173 121-324 95-271 (409)
281 PRK13580 serine hydroxymethylt 98.6 1.9E-06 4.2E-11 84.4 17.0 155 122-296 115-306 (493)
282 TIGR01814 kynureninase kynuren 98.6 5.6E-07 1.2E-11 87.2 13.0 140 121-277 89-240 (406)
283 COG2873 MET17 O-acetylhomoseri 98.6 1E-06 2.2E-11 81.7 13.1 159 95-289 64-226 (426)
284 PRK05769 4-aminobutyrate amino 98.5 1.2E-05 2.5E-10 79.0 20.2 188 121-324 118-334 (441)
285 PRK12389 glutamate-1-semialdeh 98.5 1.6E-05 3.5E-10 77.7 20.7 163 121-296 112-289 (428)
286 PLN02482 glutamate-1-semialdeh 98.5 1.9E-05 4.2E-10 78.0 20.6 163 121-296 158-335 (474)
287 KOG1368 Threonine aldolase [Am 98.5 7.1E-06 1.5E-10 74.1 15.1 203 70-297 34-246 (384)
288 TIGR03372 putres_am_tran putre 98.5 2.5E-05 5.5E-10 76.5 20.4 164 121-296 137-315 (442)
289 PTZ00094 serine hydroxymethylt 98.4 2.8E-05 6E-10 76.6 19.8 214 37-285 21-257 (452)
290 PLN02414 glycine dehydrogenase 98.4 1.3E-05 2.7E-10 85.0 18.0 138 85-238 553-705 (993)
291 COG0076 GadB Glutamate decarbo 98.4 3.6E-05 7.7E-10 75.6 19.7 183 94-291 98-293 (460)
292 PLN03226 serine hydroxymethylt 98.4 3.5E-05 7.5E-10 76.2 19.6 143 122-285 104-258 (475)
293 PRK15400 lysine decarboxylase 98.4 8.6E-06 1.9E-10 83.2 15.6 194 89-303 190-396 (714)
294 PRK00615 glutamate-1-semialdeh 98.4 4.1E-05 8.9E-10 74.9 19.8 164 121-296 113-290 (433)
295 PRK04013 argD acetylornithine/ 98.4 2.9E-05 6.2E-10 74.3 17.7 151 121-285 84-243 (364)
296 COG1104 NifS Cysteine sulfinat 98.4 6.1E-06 1.3E-10 78.1 12.6 190 68-285 11-215 (386)
297 COG0075 Serine-pyruvate aminot 98.3 1E-05 2.2E-10 76.9 14.0 145 121-285 59-206 (383)
298 PLN02590 probable tyrosine dec 98.3 1.6E-05 3.4E-10 79.5 15.5 204 74-291 147-372 (539)
299 PLN02271 serine hydroxymethylt 98.3 3.8E-05 8.3E-10 76.1 16.8 144 122-285 218-373 (586)
300 PRK05639 4-aminobutyrate amino 98.3 0.00023 5.1E-09 70.1 21.9 156 121-285 116-304 (457)
301 PLN02880 tyrosine decarboxylas 98.3 5.1E-05 1.1E-09 75.4 17.3 187 87-285 112-320 (490)
302 PRK05965 hypothetical protein; 98.3 0.0003 6.5E-09 69.4 22.7 163 121-296 110-306 (459)
303 PRK11522 putrescine--2-oxoglut 98.3 0.00016 3.5E-09 71.3 20.7 164 121-296 144-322 (459)
304 PF00282 Pyridoxal_deC: Pyrido 98.2 1.8E-05 3.9E-10 75.9 12.7 202 74-292 56-280 (373)
305 PRK12403 putative aminotransfe 98.2 0.00032 6.9E-09 69.3 21.5 163 121-296 118-313 (460)
306 PRK15399 lysine decarboxylase 98.2 0.00011 2.4E-09 75.2 18.4 191 90-302 191-395 (713)
307 PRK06062 hypothetical protein; 98.2 0.00038 8.3E-09 68.5 21.6 163 121-296 115-305 (451)
308 PRK06082 4-aminobutyrate amino 98.2 0.00037 7.9E-09 68.8 21.4 155 121-285 133-311 (459)
309 TIGR03799 NOD_PanD_pyr putativ 98.2 0.00011 2.4E-09 73.3 17.9 195 87-295 119-354 (522)
310 COG1982 LdcC Arginine/lysine/o 98.2 7.3E-05 1.6E-09 73.8 16.0 187 91-302 67-262 (557)
311 TIGR00508 bioA adenosylmethion 98.2 0.00015 3.3E-09 70.9 18.3 163 121-296 108-299 (427)
312 PRK07482 hypothetical protein; 98.2 0.00064 1.4E-08 67.1 22.4 155 121-285 114-303 (461)
313 PRK13578 ornithine decarboxyla 98.1 7.3E-05 1.6E-09 76.6 15.8 177 89-284 169-366 (720)
314 COG1103 Archaea-specific pyrid 98.1 0.00021 4.5E-09 64.0 15.7 213 95-337 63-286 (382)
315 PRK07046 aminotransferase; Val 98.1 0.00079 1.7E-08 66.3 21.5 161 121-296 133-306 (453)
316 cd00611 PSAT_like Phosphoserin 98.1 0.0001 2.3E-09 70.2 14.8 164 95-295 46-212 (355)
317 PRK06917 hypothetical protein; 98.1 0.00084 1.8E-08 66.0 21.5 164 121-296 94-291 (447)
318 PRK06943 adenosylmethionine--8 98.1 0.001 2.2E-08 65.6 22.0 163 121-296 117-313 (453)
319 TIGR00461 gcvP glycine dehydro 98.0 9.5E-05 2E-09 77.7 14.9 144 86-239 516-668 (939)
320 PRK06209 glutamate-1-semialdeh 98.0 0.00032 7E-09 68.6 17.8 147 121-285 107-264 (431)
321 PRK07030 adenosylmethionine--8 98.0 0.0012 2.6E-08 65.3 21.8 163 121-296 110-306 (466)
322 PRK07986 adenosylmethionine--8 98.0 0.00042 9.2E-09 67.7 18.4 164 121-296 106-296 (428)
323 COG4992 ArgD Ornithine/acetylo 98.0 0.00084 1.8E-08 63.8 19.5 249 51-330 42-307 (404)
324 PLN02760 4-aminobutyrate:pyruv 98.0 0.0013 2.7E-08 65.7 21.9 164 121-296 154-351 (504)
325 PLN02724 Molybdenum cofactor s 98.0 0.00014 3.1E-09 76.6 16.0 172 95-285 80-275 (805)
326 COG1921 SelA Selenocysteine sy 98.0 0.0014 3E-08 62.3 20.8 204 66-298 35-245 (395)
327 PRK07678 aminotransferase; Val 98.0 0.0012 2.6E-08 65.0 21.6 163 121-296 108-304 (451)
328 PRK07480 putative aminotransfe 98.0 0.0013 2.9E-08 64.8 21.6 190 121-324 114-338 (456)
329 COG0001 HemL Glutamate-1-semia 98.0 0.00029 6.2E-09 67.6 15.6 212 52-285 54-281 (432)
330 COG0160 GabT 4-aminobutyrate a 98.0 0.0012 2.5E-08 64.3 19.8 218 51-285 56-304 (447)
331 PRK06938 diaminobutyrate--2-ox 98.0 0.0023 5E-08 63.3 22.3 154 122-285 131-313 (464)
332 PRK06173 adenosylmethionine--8 97.9 0.00087 1.9E-08 65.6 18.7 163 121-296 107-298 (429)
333 PRK06916 adenosylmethionine--8 97.9 0.0015 3.3E-08 64.5 20.5 163 121-296 119-315 (460)
334 TIGR01364 serC_1 phosphoserine 97.9 0.00057 1.2E-08 65.1 16.7 143 121-296 58-205 (349)
335 COG0112 GlyA Glycine/serine hy 97.9 0.0009 2E-08 63.0 17.3 208 52-297 27-251 (413)
336 PF00464 SHMT: Serine hydroxym 97.9 0.00016 3.4E-09 69.5 12.7 203 52-285 21-244 (399)
337 PRK05367 glycine dehydrogenase 97.9 0.0002 4.3E-09 76.2 14.6 137 93-239 538-680 (954)
338 PRK06105 aminotransferase; Pro 97.9 0.0021 4.7E-08 63.4 21.1 163 121-296 112-309 (460)
339 PRK06931 diaminobutyrate--2-ox 97.9 0.0028 6E-08 62.6 21.7 155 121-285 124-307 (459)
340 PRK13360 omega amino acid--pyr 97.9 0.0023 4.9E-08 62.9 20.3 164 121-296 109-306 (442)
341 PRK07481 hypothetical protein; 97.9 0.0045 9.7E-08 61.0 22.3 163 121-296 107-304 (449)
342 PRK07483 hypothetical protein; 97.8 0.0025 5.4E-08 62.6 20.1 164 121-296 93-291 (443)
343 PRK08742 adenosylmethionine--8 97.8 0.0012 2.6E-08 65.4 17.9 163 121-296 132-328 (472)
344 PF00202 Aminotran_3: Aminotra 97.8 0.00073 1.6E-08 64.0 15.8 216 51-285 16-259 (339)
345 PRK07036 hypothetical protein; 97.8 0.0055 1.2E-07 60.6 22.4 164 121-296 115-312 (466)
346 PRK05630 adenosylmethionine--8 97.8 0.0014 3.1E-08 64.0 17.9 159 121-296 103-292 (422)
347 TIGR02617 tnaA_trp_ase tryptop 97.8 0.003 6.5E-08 61.2 19.3 232 70-325 55-320 (467)
348 PRK09221 beta alanine--pyruvat 97.8 0.0071 1.5E-07 59.5 22.4 163 121-296 112-309 (445)
349 PRK06149 hypothetical protein; 97.8 0.0027 6E-08 68.3 20.3 165 121-296 644-835 (972)
350 KOG2862 Alanine-glyoxylate ami 97.7 0.0011 2.4E-08 60.6 13.0 110 121-238 71-182 (385)
351 TIGR03811 tyr_de_CO2_Ent tyros 97.6 0.0047 1E-07 62.7 17.7 94 146-241 224-325 (608)
352 PRK06148 hypothetical protein; 97.6 0.0053 1.1E-07 66.4 19.0 165 121-296 683-875 (1013)
353 KOG1401 Acetylornithine aminot 97.6 0.023 4.9E-07 54.0 20.6 191 121-324 119-323 (433)
354 PRK12566 glycine dehydrogenase 97.5 0.0018 3.8E-08 68.2 14.0 144 86-239 529-681 (954)
355 PRK08297 L-lysine aminotransfe 97.5 0.0084 1.8E-07 59.0 17.9 122 121-242 113-272 (443)
356 PRK05355 3-phosphoserine/phosp 97.4 0.0022 4.7E-08 61.4 12.7 172 121-324 70-252 (360)
357 PRK05367 glycine dehydrogenase 97.4 0.0073 1.6E-07 64.5 16.7 148 55-236 80-242 (954)
358 PLN02974 adenosylmethionine-8- 97.3 0.028 6.1E-07 59.2 20.2 79 206-296 595-676 (817)
359 COG4100 Cystathionine beta-lya 97.3 0.0067 1.5E-07 55.3 13.3 146 122-285 87-248 (416)
360 PRK03080 phosphoserine aminotr 97.2 0.0037 7.9E-08 60.1 11.7 160 95-296 50-215 (378)
361 COG1003 GcvP Glycine cleavage 97.2 0.0055 1.2E-07 58.5 12.0 140 85-237 94-242 (496)
362 TIGR03251 LAT_fam L-lysine 6-t 97.1 0.056 1.2E-06 53.0 18.4 121 121-242 106-265 (431)
363 KOG1383 Glutamate decarboxylas 96.9 0.014 3.1E-07 56.1 12.2 194 33-243 61-263 (491)
364 KOG1359 Glycine C-acetyltransf 96.8 0.032 6.9E-07 50.9 12.8 99 181-286 177-276 (417)
365 PF05889 SLA_LP_auto_ag: Solub 96.7 0.013 2.8E-07 55.7 10.4 165 121-298 77-247 (389)
366 PF03841 SelA: L-seryl-tRNA se 96.6 0.0032 7E-08 59.3 5.4 159 121-298 65-235 (367)
367 PLN02414 glycine dehydrogenase 96.6 0.043 9.3E-07 58.8 13.9 146 56-234 108-268 (993)
368 KOG1360 5-aminolevulinate synt 96.5 0.24 5.2E-06 47.2 16.7 106 182-299 288-395 (570)
369 COG3033 TnaA Tryptophanase [Am 96.4 0.049 1.1E-06 51.1 11.6 141 87-237 73-227 (471)
370 TIGR01365 serC_2 phosphoserine 96.4 0.15 3.2E-06 49.0 15.3 143 121-297 61-207 (374)
371 PLN02452 phosphoserine transam 96.1 0.42 9E-06 45.8 16.7 142 121-295 74-219 (365)
372 COG0161 BioA Adenosylmethionin 96.0 0.5 1.1E-05 46.2 16.6 164 121-298 108-308 (449)
373 PRK12462 phosphoserine aminotr 95.8 0.28 6.1E-06 46.8 14.0 169 121-322 71-252 (364)
374 TIGR00699 GABAtrns_euk 4-amino 95.8 0.13 2.8E-06 50.9 12.0 122 121-242 125-298 (464)
375 TIGR01366 serC_3 phosphoserine 95.7 0.17 3.7E-06 48.3 12.5 160 95-296 43-206 (361)
376 PLN02672 methionine S-methyltr 95.7 0.26 5.7E-06 53.3 14.7 216 81-318 414-641 (1082)
377 COG0403 GcvP Glycine cleavage 94.8 0.98 2.1E-05 43.5 14.0 153 56-234 80-245 (450)
378 KOG0628 Aromatic-L-amino-acid/ 94.8 0.043 9.4E-07 52.9 4.9 92 146-242 184-278 (511)
379 KOG1404 Alanine-glyoxylate ami 94.4 3.4 7.5E-05 39.4 16.3 191 87-298 87-304 (442)
380 TIGR00461 gcvP glycine dehydro 94.0 1.3 2.9E-05 47.3 14.3 147 56-235 69-229 (939)
381 PF02347 GDC-P: Glycine cleava 93.0 0.78 1.7E-05 44.7 9.9 74 144-234 154-231 (429)
382 KOG3843 Predicted serine hydro 92.5 1.9 4.1E-05 39.0 10.8 148 123-285 80-236 (432)
383 KOG1357 Serine palmitoyltransf 92.5 0.45 9.7E-06 46.0 7.2 136 143-297 220-367 (519)
384 KOG0629 Glutamate decarboxylas 90.4 1.1 2.4E-05 43.1 7.5 80 157-240 210-294 (510)
385 KOG2040 Glycine dehydrogenase 90.1 3.3 7.2E-05 42.1 10.8 143 85-237 567-718 (1001)
386 COG3844 Kynureninase [Amino ac 89.3 2.5 5.4E-05 39.5 8.7 105 121-239 96-206 (407)
387 KOG1402 Ornithine aminotransfe 87.4 3.7 8E-05 38.5 8.5 126 182-324 195-322 (427)
388 KOG1358 Serine palmitoyltransf 85.9 13 0.00027 35.8 11.3 129 88-239 134-273 (467)
389 PRK12566 glycine dehydrogenase 82.3 28 0.00062 37.5 13.4 71 144-234 168-242 (954)
390 KOG2467 Glycine/serine hydroxy 80.9 12 0.00026 35.6 9.0 157 68-239 50-227 (477)
391 cd06568 GH20_SpHex_like A subg 78.9 4.8 0.0001 38.0 5.9 70 158-234 24-93 (329)
392 PF02662 FlpD: Methyl-viologen 76.3 12 0.00025 30.0 6.7 59 166-229 29-90 (124)
393 cd02742 GH20_hexosaminidase Be 73.3 9.6 0.00021 35.4 6.3 68 159-234 23-90 (303)
394 cd06570 GH20_chitobiase-like_1 66.9 12 0.00026 35.0 5.4 62 159-234 25-86 (311)
395 cd06562 GH20_HexA_HexB-like Be 65.6 14 0.0003 35.2 5.7 65 159-235 25-89 (348)
396 PF00728 Glyco_hydro_20: Glyco 63.0 11 0.00024 35.5 4.5 68 159-235 25-92 (351)
397 PF05368 NmrA: NmrA-like famil 60.1 1.1E+02 0.0023 26.6 10.2 87 128-231 9-96 (233)
398 cd06569 GH20_Sm-chitobiase-lik 59.4 26 0.00057 34.5 6.5 27 208-234 89-115 (445)
399 KOG1403 Predicted alanine-glyo 59.1 72 0.0016 29.8 8.6 167 121-297 105-301 (452)
400 PF10087 DUF2325: Uncharacteri 57.5 79 0.0017 23.7 9.0 71 152-234 10-80 (97)
401 PF04019 DUF359: Protein of un 53.1 1.1E+02 0.0024 24.3 8.0 76 206-301 40-116 (121)
402 cd07476 Peptidases_S8_thiazoli 52.5 41 0.00089 30.5 6.2 70 165-234 74-143 (267)
403 cd06563 GH20_chitobiase-like T 51.6 16 0.00034 34.9 3.5 29 206-234 76-104 (357)
404 TIGR01470 cysG_Nterm siroheme 47.7 1.9E+02 0.0041 25.1 10.6 96 121-242 12-109 (205)
405 KOG2741 Dimeric dihydrodiol de 47.6 35 0.00075 32.3 4.9 92 130-241 42-134 (351)
406 PF08672 APC2: Anaphase promot 47.0 19 0.00041 24.9 2.3 34 205-238 25-58 (60)
407 cd06564 GH20_DspB_LnbB-like Gl 46.8 21 0.00046 33.5 3.5 27 208-234 74-100 (326)
408 PF00218 IGPS: Indole-3-glycer 46.2 47 0.001 30.1 5.4 78 146-234 86-163 (254)
409 smart00642 Aamy Alpha-amylase 44.8 31 0.00067 29.0 3.9 28 214-241 68-95 (166)
410 COG0031 CysK Cysteine synthase 44.8 1.4E+02 0.003 27.9 8.3 76 89-173 35-116 (300)
411 PRK04147 N-acetylneuraminate l 44.3 1.4E+02 0.0031 27.3 8.6 79 129-236 87-166 (293)
412 TIGR00649 MG423 conserved hypo 43.5 3.2E+02 0.0068 26.5 11.5 38 121-158 289-333 (422)
413 PRK08265 short chain dehydroge 43.1 2.4E+02 0.0051 24.9 11.4 95 122-223 9-108 (261)
414 cd00952 CHBPH_aldolase Trans-o 43.1 2.8E+02 0.006 25.8 11.2 81 128-236 90-171 (309)
415 KOG1405 4-aminobutyrate aminot 42.9 69 0.0015 30.6 6.0 30 212-241 288-317 (484)
416 TIGR03793 TOMM_pelo TOMM prope 41.9 44 0.00096 24.3 3.7 17 205-222 59-75 (77)
417 TIGR02104 pulA_typeI pullulana 41.5 30 0.00064 35.6 3.9 36 204-242 220-255 (605)
418 PLN02970 serine racemase 41.2 1.6E+02 0.0034 27.6 8.4 51 121-172 78-128 (328)
419 PRK09778 putative antitoxin of 40.4 24 0.00051 26.7 2.1 31 196-228 26-56 (97)
420 COG2102 Predicted ATPases of P 40.0 1.8E+02 0.0039 25.8 7.9 70 158-233 105-177 (223)
421 COG1909 Uncharacterized protei 39.4 2.1E+02 0.0045 24.1 7.7 77 206-302 85-162 (167)
422 COG0134 TrpC Indole-3-glycerol 39.1 32 0.0007 31.1 3.2 78 146-234 84-161 (254)
423 PRK13957 indole-3-glycerol-pho 38.9 1.3E+02 0.0028 27.2 7.0 76 148-234 80-156 (247)
424 PF03786 UxuA: D-mannonate deh 38.8 37 0.0008 32.3 3.7 34 200-233 29-62 (351)
425 PF00128 Alpha-amylase: Alpha 38.6 26 0.00056 31.7 2.7 29 214-242 50-78 (316)
426 COG1105 FruK Fructose-1-phosph 37.4 3.5E+02 0.0076 25.3 10.2 87 143-237 77-167 (310)
427 TIGR00683 nanA N-acetylneurami 37.3 66 0.0014 29.6 5.1 80 129-236 84-164 (290)
428 PF14258 DUF4350: Domain of un 36.4 94 0.002 21.6 4.8 23 213-235 47-70 (70)
429 PRK08638 threonine dehydratase 36.0 2E+02 0.0042 27.1 8.2 51 121-172 78-128 (333)
430 PF13684 Dak1_2: Dihydroxyacet 36.0 97 0.0021 29.0 6.1 68 157-235 108-175 (313)
431 PF04273 DUF442: Putative phos 35.3 44 0.00096 26.1 3.1 50 143-195 26-87 (110)
432 cd06449 ACCD Aminocyclopropane 34.6 2.6E+02 0.0055 25.8 8.7 16 157-172 100-115 (307)
433 COG4567 Response regulator con 34.1 1.3E+02 0.0028 25.3 5.6 94 124-229 62-155 (182)
434 PLN02460 indole-3-glycerol-pho 34.0 61 0.0013 30.7 4.3 79 146-234 157-235 (338)
435 PRK07476 eutB threonine dehydr 34.0 2.4E+02 0.0052 26.3 8.4 50 122-172 71-120 (322)
436 KOG1200 Mitochondrial/plastidi 33.9 3.3E+02 0.0072 24.0 9.4 98 122-224 18-120 (256)
437 COG5625 Predicted transcriptio 33.6 41 0.00088 25.8 2.5 25 276-301 73-97 (113)
438 cd06448 L-Ser-dehyd Serine deh 32.7 3.6E+02 0.0078 25.0 9.4 48 122-172 55-104 (316)
439 KOG1209 1-Acyl dihydroxyaceton 32.4 3.2E+02 0.007 24.4 8.1 84 121-210 10-94 (289)
440 TIGR00334 5S_RNA_mat_M5 ribonu 32.3 60 0.0013 27.6 3.6 49 181-240 12-60 (174)
441 COG0647 NagD Predicted sugar p 32.1 2.8E+02 0.006 25.4 8.2 86 139-226 86-181 (269)
442 TIGR02026 BchE magnesium-proto 32.0 3.2E+02 0.0068 27.3 9.4 47 180-234 49-97 (497)
443 COG1648 CysG Siroheme synthase 32.0 3.5E+02 0.0076 23.7 9.6 89 121-236 15-105 (210)
444 PF03460 NIR_SIR_ferr: Nitrite 31.9 22 0.00047 24.8 0.8 23 206-229 15-37 (69)
445 COG0329 DapA Dihydrodipicolina 31.7 99 0.0022 28.7 5.4 80 128-236 86-166 (299)
446 PRK01160 hypothetical protein; 30.4 3.2E+02 0.0069 23.4 7.7 78 206-303 90-171 (178)
447 PLN00011 cysteine synthase 30.3 4.5E+02 0.0098 24.4 9.7 51 121-172 72-122 (323)
448 cd06565 GH20_GcnA-like Glycosy 30.2 64 0.0014 29.9 3.8 25 210-234 54-78 (301)
449 PF13872 AAA_34: P-loop contai 29.8 37 0.00081 31.5 2.1 27 214-240 157-184 (303)
450 PF13460 NAD_binding_10: NADH( 29.7 3.1E+02 0.0068 22.4 9.7 92 123-235 2-98 (183)
451 PF01408 GFO_IDH_MocA: Oxidore 29.6 1.7E+02 0.0037 22.2 5.7 19 214-232 98-116 (120)
452 COG0296 GlgB 1,4-alpha-glucan 29.0 76 0.0017 32.7 4.3 37 204-243 205-241 (628)
453 PRK00278 trpC indole-3-glycero 28.8 2.1E+02 0.0046 25.8 6.9 57 169-235 110-166 (260)
454 cd07484 Peptidases_S8_Thermita 28.3 1.4E+02 0.003 26.5 5.7 64 166-234 95-158 (260)
455 PRK06483 dihydromonapterin red 27.8 3.9E+02 0.0085 22.9 10.8 46 123-170 6-52 (236)
456 PRK05678 succinyl-CoA syntheta 27.6 2.5E+02 0.0054 26.0 7.2 47 183-238 79-125 (291)
457 PRK07102 short chain dehydroge 27.6 3.8E+02 0.0082 23.1 8.3 31 123-155 5-36 (243)
458 TIGR00674 dapA dihydrodipicoli 27.5 4.7E+02 0.01 23.7 9.4 18 206-223 131-150 (285)
459 TIGR03815 CpaE_hom_Actino heli 27.1 5E+02 0.011 24.0 11.2 148 72-237 55-213 (322)
460 TIGR02402 trehalose_TreZ malto 27.0 95 0.0021 31.5 4.7 29 214-242 158-186 (542)
461 COG4821 Uncharacterized protei 26.8 1.9E+02 0.004 25.5 5.6 34 194-235 104-137 (243)
462 COG2102 Predicted ATPases of P 26.4 4.6E+02 0.01 23.3 10.4 149 122-298 5-167 (223)
463 KOG0725 Reductases with broad 26.1 5E+02 0.011 23.5 9.7 99 122-224 12-120 (270)
464 PF07745 Glyco_hydro_53: Glyco 26.1 1.1E+02 0.0024 28.9 4.7 77 157-243 8-85 (332)
465 cd00954 NAL N-Acetylneuraminic 25.9 1.4E+02 0.003 27.3 5.3 28 206-236 135-164 (288)
466 PF04002 RadC: RadC-like JAB d 25.8 1.9E+02 0.0041 22.8 5.4 57 181-241 51-117 (123)
467 PRK13802 bifunctional indole-3 25.8 1.7E+02 0.0037 30.7 6.3 78 146-234 88-165 (695)
468 PF04016 DUF364: Domain of unk 25.8 87 0.0019 25.7 3.5 79 142-231 9-91 (147)
469 KOG3851 Sulfide:quinone oxidor 25.5 51 0.0011 31.1 2.2 50 120-169 41-90 (446)
470 PRK14467 ribosomal RNA large s 25.4 5.2E+02 0.011 24.6 9.1 18 210-227 262-279 (348)
471 PRK06815 hypothetical protein; 25.3 4E+02 0.0086 24.7 8.3 51 122-173 72-122 (317)
472 PRK11761 cysM cysteine synthas 25.0 2.6E+02 0.0056 25.7 6.9 49 121-172 66-116 (296)
473 PRK10717 cysteine synthase A; 25.0 3E+02 0.0065 25.6 7.4 52 121-173 67-118 (330)
474 COG1111 MPH1 ERCC4-like helica 24.4 2E+02 0.0044 28.8 6.1 106 121-241 35-144 (542)
475 PF06462 Hyd_WA: Propeller; I 24.4 47 0.001 19.6 1.2 11 203-213 18-28 (32)
476 TIGR01244 conserved hypothetic 24.2 88 0.0019 25.1 3.2 48 159-211 51-101 (135)
477 KOG2656 DNA methyltransferase 24.2 74 0.0016 30.5 3.0 26 211-236 131-158 (445)
478 KOG1201 Hydroxysteroid 17-beta 24.1 5.9E+02 0.013 23.7 9.7 97 121-223 41-143 (300)
479 COG2984 ABC-type uncharacteriz 24.0 6.1E+02 0.013 23.9 10.9 127 86-235 64-194 (322)
480 TIGR01275 ACC_deam_rel pyridox 24.0 4.6E+02 0.0099 24.1 8.4 50 122-172 59-112 (311)
481 PRK09441 cytoplasmic alpha-amy 23.9 81 0.0018 31.3 3.5 29 214-242 79-107 (479)
482 TIGR02064 dsrA sulfite reducta 23.8 71 0.0015 31.1 3.0 25 205-229 86-110 (402)
483 PRK02854 primosomal protein Dn 23.4 1E+02 0.0022 26.1 3.4 36 190-227 24-59 (179)
484 cd00950 DHDPS Dihydrodipicolin 23.2 2.8E+02 0.006 25.2 6.7 61 157-223 87-152 (284)
485 PF03033 Glyco_transf_28: Glyc 23.1 2.3E+02 0.0049 22.1 5.5 34 136-173 20-53 (139)
486 TIGR03599 YloV DAK2 domain fus 23.1 2.1E+02 0.0045 29.0 6.2 76 147-234 317-392 (530)
487 cd01563 Thr-synth_1 Threonine 23.0 5.5E+02 0.012 23.7 8.8 51 121-172 73-123 (324)
488 PRK10595 SOS cell division inh 23.0 4.6E+02 0.01 22.1 11.4 92 133-231 44-136 (164)
489 PF05042 Caleosin: Caleosin re 23.0 34 0.00074 29.0 0.5 87 145-235 59-158 (174)
490 PRK06500 short chain dehydroge 22.9 4.9E+02 0.011 22.3 10.1 50 122-173 9-59 (249)
491 PRK05638 threonine synthase; V 22.7 4.6E+02 0.0099 25.7 8.5 48 122-172 116-165 (442)
492 COG1086 Predicted nucleoside-d 22.6 8.5E+02 0.018 25.0 10.4 86 123-230 120-205 (588)
493 PRK14457 ribosomal RNA large s 22.6 6.5E+02 0.014 23.9 9.2 69 162-234 250-324 (345)
494 TIGR00695 uxuA mannonate dehyd 22.0 1.5E+02 0.0032 28.8 4.6 31 203-233 30-60 (394)
495 PLN03244 alpha-amylase; Provis 21.9 1.4E+02 0.0031 31.7 4.8 40 204-243 429-468 (872)
496 PRK14453 chloramphenicol/florf 21.9 6.2E+02 0.013 24.0 8.9 30 205-234 289-324 (347)
497 cd04848 Peptidases_S8_Autotran 21.8 3.3E+02 0.0072 23.8 6.9 70 165-234 71-151 (267)
498 cd04728 ThiG Thiazole synthase 21.8 6E+02 0.013 23.0 9.3 75 146-228 11-88 (248)
499 TIGR02102 pullulan_Gpos pullul 21.8 1.2E+02 0.0025 33.7 4.3 35 204-241 546-580 (1111)
500 TIGR03581 EF_0839 conserved hy 21.7 3.5E+02 0.0077 24.0 6.4 74 158-242 141-215 (236)
No 1
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5.5e-61 Score=438.18 Aligned_cols=311 Identities=50% Similarity=0.896 Sum_probs=297.3
Q ss_pred ccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHH
Q 047180 26 WWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLK 104 (337)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~ 104 (337)
+|++++..++++|+.+.+.+++++++++|||++|.|.+++|.++..++|++|.+.+ +......|.|..|+++|++++++
T Consensus 1 ~F~~i~~~p~DpIlgL~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ 80 (396)
T COG1448 1 MFEKIEAAPADPILGLKEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQK 80 (396)
T ss_pred CccccccCCCCchhHHHHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHH
Confidence 38999999999999999999999999999999999999999999999999999887 55567899999999999999999
Q ss_pred HHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChH
Q 047180 105 LAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFA 184 (337)
Q Consensus 105 ~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~ 184 (337)
.++|.+.+.++++++..++|.||+||+.+.+.+++++.|..+|++++|+|++|..+++.+|.++..||+++.++.++|++
T Consensus 81 llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~ 160 (396)
T COG1448 81 LLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFD 160 (396)
T ss_pred HhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHH
Confidence 99999888888999999999999999999999999888888999999999999999999999999999999888899999
Q ss_pred HHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEE
Q 047180 185 ALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLG 264 (337)
Q Consensus 185 ~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 264 (337)
.+.+.|++.+.+.++++++|||||||..+|.++|++|+++.++++++++.|-+|++|..| .++|...++.|+.....++
T Consensus 161 ~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-leeDa~~lR~~a~~~~~~l 239 (396)
T COG1448 161 GMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LEEDAYALRLFAEVGPELL 239 (396)
T ss_pred HHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hHHHHHHHHHHHHhCCcEE
Confidence 999999999999999999999999999999999999999999999999999999999988 7889999999988777799
Q ss_pred EEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhhhC
Q 047180 265 LAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKEVQ 337 (337)
Q Consensus 265 ~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~el~ 337 (337)
+++||||+||++|.|+|++.+++.|.+...++.++|..++|++||+||.+|..+++.+|+|++++++|.+||.
T Consensus 240 va~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~ 312 (396)
T COG1448 240 VASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELE 312 (396)
T ss_pred EEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999973
No 2
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-54 Score=388.94 Aligned_cols=317 Identities=60% Similarity=1.030 Sum_probs=303.2
Q ss_pred cccccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHH
Q 047180 21 RWMSSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMV 99 (337)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr 99 (337)
.-|.|+|++|+..|+|+|+.+.+.+++++++.+|||+.|.|++++++|++++.|++|.+++ .......|.|..|+++|.
T Consensus 22 ~~~~s~~s~V~maPpDpILGVTeAfk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~ 101 (427)
T KOG1411|consen 22 ARASSWWSHVEMAPPDPILGVTEAFKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFN 101 (427)
T ss_pred ccccchhhcCCCCCCCCcccHHHHHhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHH
Confidence 3378999999999999999999999999999999999999999999999999999999987 444456899999999999
Q ss_pred HHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCC
Q 047180 100 EETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTK 179 (337)
Q Consensus 100 ~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~ 179 (337)
+..+++.+|.+.+.+.++++..++|.+|+||+.+.+.+|..+.|+.+|++|+|+|.++..+++.+|..+..|.++++.+.
T Consensus 102 k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~ 181 (427)
T KOG1411|consen 102 KLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTR 181 (427)
T ss_pred HHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeecccccc
Confidence 99999999999999999999999999999999999999999889999999999999999999999999999999888889
Q ss_pred CCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc
Q 047180 180 GLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD 259 (337)
Q Consensus 180 ~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 259 (337)
++|++.+.+.+.+.+...++++..+.|||||...|.++|++|.++.++++++.+.|.+|++|.+|+.+.|+.+++.|.+.
T Consensus 182 gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~ 261 (427)
T KOG1411|consen 182 GLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVED 261 (427)
T ss_pred ccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHc
Confidence 99999999999988888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhhhC
Q 047180 260 GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKEVQ 337 (337)
Q Consensus 260 ~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~el~ 337 (337)
+.+++++.||+|++|++|.|+|.+.+++.+++...++.+|++.+.|.++++||.++.++++++|+|++++.+|..|++
T Consensus 262 g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk 339 (427)
T KOG1411|consen 262 GHEILLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVK 339 (427)
T ss_pred CCceEeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999873
No 3
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-52 Score=402.53 Aligned_cols=312 Identities=54% Similarity=0.943 Sum_probs=248.2
Q ss_pred cccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHH
Q 047180 23 MSSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEE 101 (337)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~a 101 (337)
|-|+|+++...+.+.+..+.+.++++..++++||++|.+.++++...+.+.++++..++ ......+|+|..|.++||++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~a 80 (404)
T PTZ00376 1 MDSLFSQVPLGPPDPILGLAAAFKADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEA 80 (404)
T ss_pred CchhhhcCCcCCCChHHHHHHHHhhcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHH
Confidence 45678899888888888888777665556889999998765555445566777777665 23445789999999999999
Q ss_pred HHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh-hCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCC
Q 047180 102 TLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR-FHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKG 180 (337)
Q Consensus 102 ia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~-~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~ 180 (337)
+++|+.+.++..+++++|...+|.|+++++.+++.++.. ..|||+|++++|+|+.|...++.+|++++++|+.++++++
T Consensus 81 ia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~ 160 (404)
T PTZ00376 81 AQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKG 160 (404)
T ss_pred HHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCC
Confidence 999997766544567776434799999999988764422 2399999999999999999999999999999985444689
Q ss_pred CChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcC
Q 047180 181 LDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDG 260 (337)
Q Consensus 181 ~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 260 (337)
+|++.+++.+.+...+++++++||||||||.++|++++++|+++|++|+++||+||+|.+|.+++...+..++..+....
T Consensus 161 ~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 240 (404)
T PTZ00376 161 LDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERG 240 (404)
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcC
Confidence 99999999886433345677779999999999999999999999999999999999999998642111222334444444
Q ss_pred CeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 261 HLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 261 ~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
+++++++||||+|++||||+||++++..++++++++.+++..+.+..|++++.++|.++..+|+++++.++|.+
T Consensus 241 ~~vi~i~SfSK~~~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 314 (404)
T PTZ00376 241 VEFLVAQSFSKNMGLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLS 314 (404)
T ss_pred CcEEEEEeCCCcccccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHH
Confidence 68999999999999999999999754568888777877777666667877888999999999999877666644
No 4
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=100.00 E-value=1.4e-52 Score=371.09 Aligned_cols=313 Identities=45% Similarity=0.780 Sum_probs=297.2
Q ss_pred ccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh--cCcCCCCCCCCCCCHHHHHH
Q 047180 24 SSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI--AGTANMEYLPMGGSVKMVEE 101 (337)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~--~~~~~~~Y~~~~G~~~lr~a 101 (337)
||.|+.++..++..++.+.+.|.++..+.++||++|.|++++++|++.|.|+++...+ +...+|.|.|..|++.|+.+
T Consensus 3 ~s~f~~I~~a~p~~vf~~~~~y~~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~ 82 (410)
T KOG1412|consen 3 MSFFANIPVAPPIEVFKLNASYGEDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKA 82 (410)
T ss_pred cchhcCCccCChHHHHhhHHHhcccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhh
Confidence 4789999999999999999999999999999999999999999999999999998877 44567899999999999999
Q ss_pred HHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCc-eeeEeeeccCCCCC
Q 047180 102 TLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHV-TQRTFHYYHPGTKG 180 (337)
Q Consensus 102 ia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~-~~~~~~~~~~~~~~ 180 (337)
.++.++|.+.+.+.++++..+++.+|+||+.+.+.+|..+.+..+|++.+|+|.++..+++.+|. ++..|++++.++.+
T Consensus 83 A~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~ 162 (410)
T KOG1412|consen 83 ATELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKC 162 (410)
T ss_pred hHHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCce
Confidence 99999999999999999999999999999999999999888889999999999999999999994 58889999888899
Q ss_pred CChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcC
Q 047180 181 LDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDG 260 (337)
Q Consensus 181 ~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 260 (337)
+|++.+...++.+|...++++..+.|||||...|+|+|.+|+++.++++++.+.|-+|++|++||.+.|.+.++.|.+++
T Consensus 163 ~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g 242 (410)
T KOG1412|consen 163 VDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQG 242 (410)
T ss_pred ecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcC
Confidence 99999999999988888888877779999999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhhh
Q 047180 261 HLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKEV 336 (337)
Q Consensus 261 ~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~el 336 (337)
..++++.||+|+||++|.|+|.+.++..|+..+..+.+||..+.+..|++||++|.+++..+|+.|+++++|.+.+
T Consensus 243 ~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~si 318 (410)
T KOG1412|consen 243 FELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSI 318 (410)
T ss_pred CeEEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999999998865
No 5
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=1.1e-51 Score=398.02 Aligned_cols=305 Identities=48% Similarity=0.839 Sum_probs=245.1
Q ss_pred cccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHH
Q 047180 27 WRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKL 105 (337)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~ 105 (337)
|+++...+.+++..+...++....+++|||++|.+.+++..++..+.+.++..++ ......+|++..|.++||+++++|
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 81 (396)
T PRK09257 2 FEHLEAAPADPILGLMEAFRADPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL 81 (396)
T ss_pred cccCCCCCCChHHHHHHHHhhCCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence 6778888888888887777665556899999998765444443347788887775 333456899999999999999999
Q ss_pred HhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 106 AYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 106 ~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
+.+.+...+++++|.+++|+|+++|+.++++++....|||+|++++|+|+.|..+++..|++++++|+.+++++++|++.
T Consensus 82 ~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~ 161 (396)
T PRK09257 82 LFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDA 161 (396)
T ss_pred hcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHH
Confidence 98776554567776668999999999999876653349999999999999999999999999999998444468999999
Q ss_pred HHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE
Q 047180 186 LMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL 265 (337)
Q Consensus 186 l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (337)
+++.+...+.+++++++||||||||.++|++++++|+++|++|+++||+||+|.+|.++ ...+..++..+....+++|+
T Consensus 162 l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~~~~~~~~~~~~~~vi~ 240 (396)
T PRK09257 162 MLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDG-LEEDAYGLRAFAAAGLELLV 240 (396)
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccc-hHHHHHHHHHHHhcCCcEEE
Confidence 99988754444577878999999999999999999999999999999999999999753 11123344444444568999
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHH
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLW 332 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w 332 (337)
++||||+|+++|||+||+++++++++.+.++..++....+..+++++.+.|.++..+|+++++.+.|
T Consensus 241 i~SfSK~~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~ 307 (396)
T PRK09257 241 ASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEW 307 (396)
T ss_pred EEEcCCcCccccccceeEEEEeCCHHHHHHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHH
Confidence 9999999999999999998655667766667777766666677788999999999999987654433
No 6
>PLN02397 aspartate transaminase
Probab=100.00 E-value=4.7e-51 Score=396.57 Aligned_cols=310 Identities=64% Similarity=1.072 Sum_probs=247.8
Q ss_pred cccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHH
Q 047180 25 SWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETL 103 (337)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia 103 (337)
|+|+++...+.+++..+.+.++.+..+.+++|+.|.+.++++.|...+.+.++.+.+ ..+..++|+|+.|.++||++++
T Consensus 22 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia 101 (423)
T PLN02397 22 SRFEHVEPAPPDPILGVTEAFLADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSA 101 (423)
T ss_pred hHHHcCCcCCCChHHHHHHHHhhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHH
Confidence 669999999999999998888877778899999998666655555567888887665 4444568999999999999999
Q ss_pred HHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCCh
Q 047180 104 KLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDF 183 (337)
Q Consensus 104 ~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~ 183 (337)
+|+++++....++++|..+.|.+|+|+..+++.++..+.|||+|++++|+|+.|..+++.+|++++++|+.+++++++|+
T Consensus 102 ~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~ 181 (423)
T PLN02397 102 KLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDF 181 (423)
T ss_pred HHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCH
Confidence 99987764434444554455777777766555555544499999999999999999999999999999985444589999
Q ss_pred HHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeE
Q 047180 184 AALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLL 263 (337)
Q Consensus 184 ~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
+.+++.+.+.+++++++++||||||||.++|+++|++|+++|++|+++||+||+|.+|.+++...+..++..+....+++
T Consensus 182 ~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v 261 (423)
T PLN02397 182 DGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEI 261 (423)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcE
Confidence 99988886543446778889999999999999999999999999999999999999998642111223444444444679
Q ss_pred EEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 264 GLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 264 i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
|+++||||+|+|+|||+||++++.++++.++++..++..+.+..+++++.++|.++..+|+++++.++|.+
T Consensus 262 I~~~SfSK~~~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~ 332 (423)
T PLN02397 262 LVAQSYAKNMGLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTK 332 (423)
T ss_pred EEEEECcccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999755567777777777777776667778899999999999999877777743
No 7
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-49 Score=379.84 Aligned_cols=256 Identities=17% Similarity=0.159 Sum_probs=207.7
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
.++|+|++|.|+ ..+++.+.++..+ +..... .|+|..|+++||++|++++.++++..+++++ ++++|+|+++
T Consensus 28 ~~vi~l~iG~Pd-----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~-eiivt~Ga~~ 100 (393)
T COG0436 28 EDVIDLSIGEPD-----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEE-EIIVTAGAKE 100 (393)
T ss_pred CCEEEeCCCCCC-----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-eEEEeCCHHH
Confidence 579999999753 5566777776655 433322 6879999999999999999887665455554 3689999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccC-CCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHP-GTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
|+.++++++.+ |||+|++++|+|+.|..+++.+|++++.+++..+ ++|.+|++.++++++. +.+ ++++||||||
T Consensus 101 al~~~~~a~~~--pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~--ktk-~i~ln~P~NP 175 (393)
T COG0436 101 ALFLAFLALLN--PGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP--KTK-AIILNSPNNP 175 (393)
T ss_pred HHHHHHHHhcC--CCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCc--cce-EEEEeCCCCC
Confidence 99999988887 9999999999999999999999999999997433 3799999999999874 334 4555899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||+++|++++++|+++|++||++||+||+|.+|.+++. ...++..+....+++|+++||||+|+|+|||+||+++ +
T Consensus 176 TGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~--~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~--~ 251 (393)
T COG0436 176 TGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGA--EHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVG--P 251 (393)
T ss_pred cCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCC--CcCCHhhcCCCcceEEEEecccccccccccceeEeec--C
Confidence 99999999999999999999999999999999997531 1222333333246899999999999999999999987 3
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++++++. +.++.....+|++.++|.++..+|+++
T Consensus 252 ~~~l~~~----~~~~~~~~~~~~~~~~Q~aa~~aL~~~ 285 (393)
T COG0436 252 PEELIAA----LRKLKSYLTSCAPTPAQYAAIAALNGP 285 (393)
T ss_pred hHHHHHH----HHHHHHhcccCCCHHHHHHHHHHhcCc
Confidence 3444443 344556677899999999999999976
No 8
>PLN02368 alanine transaminase
Probab=100.00 E-value=9.1e-44 Score=342.90 Aligned_cols=278 Identities=15% Similarity=0.102 Sum_probs=207.3
Q ss_pred hhhHHHHHhcCCCCCeeEeeeeeeecC--------------------CCCc-----ccchHHHHHHHHh--cCcCCCCCC
Q 047180 38 ILGVTEAFLADPSPDKVNVGVGAYRDD--------------------NGKP-----VVLECVREAERRI--AGTANMEYL 90 (337)
Q Consensus 38 ~~~~~~~~~~~~~~~~i~l~~G~~~~~--------------------~~~~-----~~~~~v~~a~~~~--~~~~~~~Y~ 90 (337)
+...+.++++ ...++|+|++|+|+.. .+.| ++++.+.++.+.+ ..+...+|+
T Consensus 26 ~~~~a~~~~~-~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~~l~~~~~~~~~Y~ 104 (407)
T PLN02368 26 LYLRASELQK-EGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKHYLSLTSGGLGAYS 104 (407)
T ss_pred HHHHHHHHHH-HhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHHHHhcCCCCCCCCC
Confidence 3344444433 3357999999987411 0111 2455677776664 223467899
Q ss_pred CCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh-hhCCCCeEEEcCCCCcchHHHHHhcCceee
Q 047180 91 PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK-RFHPDSQIYIPVPTWSNHHNIWRDAHVTQR 169 (337)
Q Consensus 91 ~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~-~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~ 169 (337)
+..|.++||+++++|+.++++..+++++ +++|+|+++++.+++.++. + |||+|++++|+|+.|..+++..|++++
T Consensus 105 ~~~G~~~LR~aia~~~~~~~g~~~~~~~--I~it~Ga~~al~~~~~~l~~~--pGd~Vli~~P~Y~~y~~~~~~~g~~~v 180 (407)
T PLN02368 105 DSRGLPGVRKEVAEFIERRDGYPSDPEL--IFLTDGASKGVMQILNAVIRG--EKDGVLVPVPQYPLYSATISLLGGTLV 180 (407)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCChhh--EEEcccHHHHHHHHHHHHcCC--CCCEEEEeCCCCccHHHHHHHcCCEEE
Confidence 9999999999999999766554466665 5799999999999887765 5 899999999999999999999999999
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCC
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDP 246 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~ 246 (337)
++|+..+++|++|++.+++.++... .+..++++||||||||.++|++++++|+++|++|+++||+||+|.+|.+++.
T Consensus 181 ~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~ 260 (407)
T PLN02368 181 PYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDE 260 (407)
T ss_pred EEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 9998555568999999999886311 1234445589999999999999999999999999999999999999986421
Q ss_pred ccchHHHHHhh-h------cCCeEEEEecccccc-cccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHH
Q 047180 247 ERDAKAIRIFL-K------DGHLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALI 318 (337)
Q Consensus 247 ~~~~~~~~~~~-~------~~~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 318 (337)
....++..+. . ...++|+++||||+| ||||||+||+++...++++++++.. +....+ +++.++|.+
T Consensus 261 -~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~----~~~~~~-~~~~~~Q~a 334 (407)
T PLN02368 261 -RPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYK----VASIAL-SPNVSGQIF 334 (407)
T ss_pred -CCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHH----HhcccC-CCCcHHHHH
Confidence 1112222221 1 134899999999999 8999999999853235565555543 222334 588999999
Q ss_pred HHHHhCCH
Q 047180 319 VSTILGDA 326 (337)
Q Consensus 319 ~~~~l~~~ 326 (337)
+..+|+++
T Consensus 335 a~~~l~~~ 342 (407)
T PLN02368 335 MGLMVNPP 342 (407)
T ss_pred HHHHhCCC
Confidence 99999853
No 9
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=9.2e-44 Score=328.04 Aligned_cols=277 Identities=15% Similarity=0.069 Sum_probs=210.7
Q ss_pred ccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHH
Q 047180 28 RNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLA 106 (337)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~ 106 (337)
+++....++...++.....+...+.. |++|.+. .++|..+.++.+.+ .....++|++..|.++|++++++.+
T Consensus 10 ~~l~~~~~~vw~e~~~la~e~~~~~~--LgqGfp~-----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~ 82 (420)
T KOG0257|consen 10 RNLSTSKPYVWTEINRLAAEHKVPNP--LGQGFPD-----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAY 82 (420)
T ss_pred ccccccCCcHHHHHHHHHHhcCCCCc--ccCCCCC-----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHH
Confidence 34555555555566655555544333 9999763 44567778877765 3335789999999999999999987
Q ss_pred hCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec------cCCCCC
Q 047180 107 YGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY------HPGTKG 180 (337)
Q Consensus 107 ~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~------~~~~~~ 180 (337)
...++...++++ ++++|.|+++++..+++.+.. +||+|+|.+|.|+.|..+++++|++.+.+++. ...+|.
T Consensus 83 se~~~~~~~~~~-eVlVT~GA~~ai~~~~~~l~~--~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~ 159 (420)
T KOG0257|consen 83 SEFYGGLLDPDD-EVLVTAGANEAISSALLGLLN--PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWT 159 (420)
T ss_pred HHHhccccCCcc-cEEEecCchHHHHHHHHHHcC--CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCcccc
Confidence 543333333433 468999999999988877766 99999999999999999999999999999985 244789
Q ss_pred CChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcC
Q 047180 181 LDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDG 260 (337)
Q Consensus 181 ~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 260 (337)
+|++.++.+++. + +.+|++|+||||||.++|++||++|+++|++||++||+||+|..+.+++ .+ ...+..++...
T Consensus 160 ~D~~~le~~~t~--k-Tk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~-~~-h~r~aslPgm~ 234 (420)
T KOG0257|consen 160 LDPEELESKITE--K-TKAIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDG-NK-HIRIASLPGMY 234 (420)
T ss_pred CChHHHHhhccC--C-ccEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCC-Cc-ceeeecCCchh
Confidence 999999999874 3 4445558999999999999999999999999999999999999998752 11 12233345556
Q ss_pred CeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 261 HLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 261 ~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++++.++||||+||++|||+||++++ +. +...+..+........++..|.+.+.++..+
T Consensus 235 ertitvgS~gKtf~~TGWrlGW~igp---~~----L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~ 293 (420)
T KOG0257|consen 235 ERTITVGSFGKTFGVTGWRLGWAIGP---KH----LYSALFPVHQNFVFTCPTPIQEASAAAFALE 293 (420)
T ss_pred heEEEeccccceeeeeeeeeeeeech---HH----hhhhHHHHhhccccccCcHHHHHHHHHHhhh
Confidence 89999999999999999999999862 33 3444444544444456778888888887753
No 10
>PLN02187 rooty/superroot1
Probab=100.00 E-value=2.4e-42 Score=338.60 Aligned_cols=276 Identities=14% Similarity=0.140 Sum_probs=204.7
Q ss_pred chhhHHHHH----hcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCC
Q 047180 37 PILGVTEAF----LADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNS 111 (337)
Q Consensus 37 ~~~~~~~~~----~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~ 111 (337)
++..+...+ .+....++|+|++|.+.- .+.+.+++.+.+++.+ +..+...+|+|..|.++||+++|+|+..+++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~-~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~ 126 (462)
T PLN02187 48 TLRGVIYMLFDNCGKDVNKTILPLGHGDPSV-YPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLP 126 (462)
T ss_pred hHhhHHHHHHhhcccCCCCCeEECCCCCCCC-CCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcC
Confidence 455554433 333456799999996421 1223445566666555 3333456899999999999999999965544
Q ss_pred cccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHH
Q 047180 112 EFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIK 191 (337)
Q Consensus 112 ~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~ 191 (337)
..+++++ +++|+|+++++.+++.++.+ |||+|++++|+|+.|...++..|++++.+++..++++++|++.+++.+.
T Consensus 127 ~~~~~~~--I~it~G~~~al~~~~~~l~~--pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~ 202 (462)
T PLN02187 127 HKLTPED--IFLTAGCNQGIEIVFESLAR--PNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIAD 202 (462)
T ss_pred CCCCccc--EEEeCCHHHHHHHHHHHhcC--CCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcC
Confidence 4566776 57999999999999988876 9999999999999999999999999999998544579999999998764
Q ss_pred cCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccc
Q 047180 192 NAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAK 271 (337)
Q Consensus 192 ~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 271 (337)
. . +.++++||||||||.++|++++++|+++|++++++||+||+|.+|.+++. ...++..+.. ..++++++||||
T Consensus 203 ~--~-~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~--~~~s~~~~~~-~~~vi~l~SfSK 276 (462)
T PLN02187 203 E--N-TVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDN--PFVSMGKFAS-IVPVLTLAGISK 276 (462)
T ss_pred C--C-cEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCC--CceeHHHhcc-CCcEEEEecchh
Confidence 2 3 33444488999999999999999999999999999999999999986421 1223333332 247999999999
Q ss_pred cccccccccceeEeeeCCHHHHHHHHHHHHhhhccc-c-cCCChhHHHHHHHHhCC
Q 047180 272 NMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPM-Y-SNPPVHGALIVSTILGD 325 (337)
Q Consensus 272 ~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~-~-~~~~~~~q~~~~~~l~~ 325 (337)
.|++||||+||++++ +++.+..+...+..+.... + .+++.+.|.++..+|++
T Consensus 277 ~f~~pGlRiG~~v~~--~p~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~ 330 (462)
T PLN02187 277 GWVVPGWKIGWIALN--DPEGVFETTKVLQSIKQNLDVTPDPATIIQAALPAILEK 330 (462)
T ss_pred hcCCccceeEEEEec--CchhHHHHHHHHHHHHHhccccCCCCHHHHHHHHHHHhc
Confidence 999999999999863 4432211222232222221 2 25689999999999974
No 11
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=1.6e-42 Score=335.53 Aligned_cols=274 Identities=17% Similarity=0.160 Sum_probs=207.0
Q ss_pred hhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc
Q 047180 38 ILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD 116 (337)
Q Consensus 38 ~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~ 116 (337)
+..+.+.+.++.++++|+|++|.|.. .+...+++.+.+++.+. ......+|+|..|.++||+++++|+.++++..+++
T Consensus 19 ~~~~~~~~~~~~~~~~i~l~~G~p~~-~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~ 97 (409)
T PLN00143 19 VKFLKENFNEDDHRLAISFGFGDPSC-FECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSP 97 (409)
T ss_pred HHHHHHhcccCCCCceeeCCCCCCCC-CCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH
Confidence 33444445567778999999997631 02245677777776653 33345679999999999999999997765545666
Q ss_pred CceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 117 KRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 117 ~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
++ +++|+|+++++.+++.++.+ |||.|++++|+|+.|...++..|++++.+++.+++++.+|++.+++.+.. +.
T Consensus 98 ~~--I~it~G~~~al~~~~~~l~~--~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~ 171 (409)
T PLN00143 98 DD--VYLTLGCKHAAEIIIKVLAR--PEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADE--NT 171 (409)
T ss_pred hh--EEEecChHHHHHHHHHHHcC--CCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhccc--CC
Confidence 66 57899999999999988876 99999999999999999999999999999985445688999999887642 33
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
++++ +||||||||.++|.+++++|+++|++++++||+||+|.+|.++. ....++..+. ...++|+++||||.|++|
T Consensus 172 ~~~~-~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~--~~~~~~~~~~-~~~~vi~~~SfSK~f~~p 247 (409)
T PLN00143 172 IAMV-IINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGS--KPFVPMGLFA-SIVPVITLGSISKRWMIP 247 (409)
T ss_pred EEEE-EECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCC--CCCcchhhhc-ccCcEEEEccchhhcCCC
Confidence 4444 47899999999999999999999999999999999999998642 1112233332 235899999999999999
Q ss_pred ccccceeEeeeCCH-HHHHH--HHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 277 GQRVGCLSVLCEDE-KQAVA--VKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 277 G~RvG~~~~~~~~~-~~~~~--~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|||+||++++ ++ .+++. +...+...... ...++.+.|.++..+|++
T Consensus 248 GlRvG~~v~~--~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~ 296 (409)
T PLN00143 248 GWGLGWLVTC--DPSGLLQICEIADSIKKALNP-APFPPTFIQAAIPEILEK 296 (409)
T ss_pred ccceEEEEee--CchhhhhhHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhc
Confidence 9999999863 33 22221 22333332222 223578899999999975
No 12
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.3e-42 Score=343.74 Aligned_cols=286 Identities=14% Similarity=0.075 Sum_probs=212.3
Q ss_pred cccccCCCCCCCchhhHHHHHhc--CCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHH
Q 047180 25 SWWRNVEPAAKDPILGVTEAFLA--DPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEE 101 (337)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~a 101 (337)
...+++.....+.+..+...+++ ..+.++|+|++|.+... .+.+++.+.++..+ +. ...+|++..|.++||++
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~G~p~~~--~~~~p~~~~~~~~~~~~--~~~~Y~~~~G~~~lRea 193 (517)
T PRK13355 118 KKSHKLDNVLYDVRGPVVDEANRMEAAGTHILKLNIGNPAPF--GFRTPDEVVYDMAQQLT--DTEGYSDSKGLFSARKA 193 (517)
T ss_pred ChhHHhhccCccHHHHHHHHHHHHHHcCCCeEEecCcCCCcC--CCCCCHHHHHHHHHHhh--cCCCCCCCcChHHHHHH
Confidence 34555666555555444433332 23467999999965210 13345666665544 32 24579999999999999
Q ss_pred HHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCC
Q 047180 102 TLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGL 181 (337)
Q Consensus 102 ia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~ 181 (337)
|++|+..++...+++++ +++|+|+++++.+++.++.+ |||+|++++|+|+.|...++.+|++++.+++..+++|.+
T Consensus 194 ia~~~~~~~~~~~~~~~--I~it~G~~eal~~~~~~l~~--~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~ 269 (517)
T PRK13355 194 IMQYAQLKGLPNVDVDD--IYTGNGVSELINLSMSALLD--DGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYP 269 (517)
T ss_pred HHHHHHhcCCCCCChhH--EEEeCcHHHHHHHHHHHhCC--CCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCC
Confidence 99999766554466666 57999999999999888766 999999999999999999999999999999854456899
Q ss_pred ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCC
Q 047180 182 DFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGH 261 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 261 (337)
|++.+++++.. +.+++++ ||||||||.+++++++++|+++|++|+++||+||+|.+|.+++. ...++..+.. ..
T Consensus 270 d~~~l~~~~~~--~~k~i~i-~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~--~~~s~~~~~~-~~ 343 (517)
T PRK13355 270 DIDDIRSKITS--RTKAIVI-INPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGL--EHTSIASLAP-DL 343 (517)
T ss_pred CHHHHHHhcCc--CceEEEE-ECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCC--CcccHHHhCC-CC
Confidence 99999988752 3344444 78999999999999999999999999999999999999986421 1122333321 23
Q ss_pred eEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 262 LLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 262 ~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
.+++++||||+|+++|||+||++++ +++++++.+...+..+. ....+++.++|.++..+|.+.
T Consensus 344 ~vi~~~S~SK~~~~~G~RiG~~i~~-~~~~~~~~~~~~l~~~~-~~~~~~~~~~q~a~~~aL~~~ 406 (517)
T PRK13355 344 FCVTFSGLSKSHMIAGYRIGWMILS-GNKRIAKDYIEGLNMLA-NMRLCSNVPAQSIVQTALGGH 406 (517)
T ss_pred eEEEEecchhhccCcccceEEEEee-CchhhHHHHHHHHHHHh-cCcCCcChHHHHHHHHHhcCC
Confidence 5777899999999999999999875 35555555555554332 233457889999999999753
No 13
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=2.6e-42 Score=331.99 Aligned_cols=267 Identities=10% Similarity=0.026 Sum_probs=196.2
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
+.+.|+|+.|.+. ..+++.+.+++.+. ......+|++..|.++||+++++|+.++++..+++++ ++++|+|++
T Consensus 29 ~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-~I~it~Gs~ 102 (388)
T PRK07366 29 GKELIDLSLGSSD-----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPET-EVLPLIGSQ 102 (388)
T ss_pred CCCeEEeCCCCCC-----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcC-eEEECCCcH
Confidence 4568999999642 33456677776653 3334568999999999999999999765554456652 257899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.++++++.. |||+|++++|+|+.|...++..|++++++|+..++++.+|++++++.+.. +.++++ +||||||
T Consensus 103 ~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--~~k~i~-l~~p~NP 177 (388)
T PRK07366 103 EGTAHLPLAVLN--PGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA--QARLMV-LSYPHNP 177 (388)
T ss_pred HHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcc--cceEEE-EeCCCCC
Confidence 999999988776 99999999999999999999999999999985444577889888776642 234444 5889999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.++|.+++++|+++|++++++||+||+|.+|.+++. ....++..+.....++++++||||+||+||+|+||+++
T Consensus 178 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~--- 253 (388)
T PRK07366 178 TTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGE-VEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG--- 253 (388)
T ss_pred CCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCC-CCCCChhhCCCCcccEEEEeecccccCCcchhheehcC---
Confidence 99999999999999999999999999999999976421 10122333333335789999999999999999999985
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC-CHHHHHHHHhh
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG-DAELKKLWLKE 335 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~-~~~~~~~w~~e 335 (337)
++++++++.. +......+.+...|.++..+|. ++++.++.+++
T Consensus 254 ~~~li~~l~~----~~~~~~~~~~~~~~~~a~~~l~~~~~~l~~~~~~ 297 (388)
T PRK07366 254 NAQLIQALRQ----VKAVVDFNQYRGILNGAIAALTGPQATVQQTVQI 297 (388)
T ss_pred CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 5666666544 2222222333333444455554 44554554443
No 14
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=2.6e-42 Score=332.88 Aligned_cols=286 Identities=12% Similarity=0.058 Sum_probs=210.9
Q ss_pred CCCCCCCchhhHHHHHhc---CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHH
Q 047180 30 VEPAAKDPILGVTEAFLA---DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLA 106 (337)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~---~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~ 106 (337)
+...+.+.+..+.+.++. ..+.+.|+|+.|.+. ..+++.+.+++.+... ....|++..|.++||+++++|+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~-----~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~ 78 (396)
T PRK09147 5 LDRLQPYPFEKLRALFAGVTPPADLPPISLSIGEPK-----HPTPAFIKDALAANLD-GLASYPTTAGLPALREAIAAWL 78 (396)
T ss_pred hhcCCcchHHHHHHHHHhhhhccCCCeEecCCCCCC-----CCCCHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHH
Confidence 344444555555555443 335689999999753 3345677777765312 3567999999999999999999
Q ss_pred hCCCCcc-cccCceeEEeeccchhHHHHHHHHHhhhCC---CCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCC
Q 047180 107 YGDNSEF-IKDKRIAAVQSLSGTGACRLFADFQKRFHP---DSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLD 182 (337)
Q Consensus 107 ~~~~~~~-~~~~~i~~~~t~g~~~al~~~~~~l~~~~p---gd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d 182 (337)
.++++.. +++++ .+++|+|+++++.++++++.+ | ||.|++++|+|+.|..+++..|++++++|+..+++|++|
T Consensus 79 ~~~~g~~~~~~~~-~i~it~G~~~al~~~~~~l~~--~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d 155 (396)
T PRK09147 79 ERRYGLPALDPAT-QVLPVNGSREALFAFAQTVID--RDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPD 155 (396)
T ss_pred HHHhCCCcCCccc-eEEECCChHHHHHHHHHHHcC--CCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccC
Confidence 6654443 55542 257899999999999988876 8 899999999999999999999999999998544468899
Q ss_pred hHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh----h
Q 047180 183 FAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL----K 258 (337)
Q Consensus 183 ~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~----~ 258 (337)
++.+++.+.. +.+++++ ||||||||.++|.+++++|+++|++|+++||+||+|.+|.+++............ .
T Consensus 156 ~~~l~~~~~~--~~k~i~l-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~ 232 (396)
T PRK09147 156 FDAVPAEVWA--RTQLLFV-CSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRD 232 (396)
T ss_pred HHHHHHHHhh--ccEEEEE-cCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCcc
Confidence 9999887753 3345554 8999999999999999999999999999999999999997642101111111111 1
Q ss_pred cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 259 DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 259 ~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
..+++|+++||||.|+++|+|+||+++ ++++++++.. .......+++.+.|.++..++.+.++.++.++
T Consensus 233 ~~~~vi~~~S~SK~~~~~GlRiG~~~~---~~~l~~~~~~----~~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~~ 301 (396)
T PRK09147 233 DFKRLVVFHSLSKRSNVPGLRSGFVAG---DAALLKKFLL----YRTYHGCAMPPAVQAASIAAWNDEAHVRENRA 301 (396)
T ss_pred ccccEEEEeccccccCCccceeeeecC---CHHHHHHHHH----HhhhcccCCCHHHHHHHHHHhcchhHHHHHHH
Confidence 236899999999999999999999875 4666655543 22222235778899998888876555444443
No 15
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2.3e-42 Score=334.85 Aligned_cols=282 Identities=14% Similarity=0.077 Sum_probs=212.6
Q ss_pred cccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHH
Q 047180 27 WRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKL 105 (337)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~ 105 (337)
..++...+.+.+..+..... ..+.|+|++|.|. ..+++.+.+++.+. .. ...+|++..|.++||+++++|
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~---~~~~i~l~~G~P~-----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~Lr~aia~~ 103 (413)
T PLN00175 33 AKRLEKFKTTIFTQMSSLAI---KHGAINLGQGFPN-----FDGPDFVKEAAIQAIRD-GKNQYARGFGVPELNSAIAER 103 (413)
T ss_pred hHHhhcCCCCHHHHHHHHhh---cCCeEecCCCCCC-----CCCCHHHHHHHHHHHhc-CCCCcCCCCCCHHHHHHHHHH
Confidence 34455555555545444332 2478999999763 33466777777654 33 346899999999999999999
Q ss_pred HhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 106 AYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 106 ~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
+.++++..+++++ .+++|+|+++++.+++..+.. |||+|++++|+|+.|...++..|++++.+++..+ ++.+|++.
T Consensus 104 ~~~~~g~~~~~~~-~I~vt~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~ 179 (413)
T PLN00175 104 FKKDTGLVVDPEK-EVTVTSGCTEAIAATILGLIN--PGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDE 179 (413)
T ss_pred HHHHhCCCCCCCC-CEEEeCCHHHHHHHHHHHhCC--CCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHH
Confidence 9755444455542 257899999999988877655 9999999999999999999999999999998433 58899999
Q ss_pred HHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE
Q 047180 186 LMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL 265 (337)
Q Consensus 186 l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (337)
+++.+.. +.+++ ++||||||||.++|++++++|+++|++|+++||+||+|.+|.++. ...++..+....+++|+
T Consensus 180 l~~~~~~--~~k~i-~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~---~~~s~~~~~~~~~~vi~ 253 (413)
T PLN00175 180 LKAAFTS--KTRAI-LINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEG---DHISMASLPGMYERTVT 253 (413)
T ss_pred HHHhcCc--CceEE-EecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCC---cccChhhCCCCcCcEEE
Confidence 9988753 33444 458999999999999999999999999999999999999997642 11233334333468999
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH-HHHHHHHh
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA-ELKKLWLK 334 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~w~~ 334 (337)
++||||.|++||||+||+++ ++++++.+.. .......+++.+.|.++..+|+++ .+.++.++
T Consensus 254 i~SfSK~~~~~G~RiG~~v~---~~~l~~~l~~----~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~ 316 (413)
T PLN00175 254 MNSLGKTFSLTGWKIGWAIA---PPHLTWGVRQ----AHSFLTFATATPMQWAAVAALRAPESYYEELKR 316 (413)
T ss_pred EecchhhccCcchheeeeEe---CHHHHHHHHH----HHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999986 4555555543 333334467899999999999864 33344443
No 16
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=5.7e-42 Score=338.17 Aligned_cols=230 Identities=16% Similarity=0.123 Sum_probs=181.2
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh-hhCCCCeEEEcCCCCcchHHHHHh
Q 047180 85 ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK-RFHPDSQIYIPVPTWSNHHNIWRD 163 (337)
Q Consensus 85 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~-~~~pgd~Vlv~~P~y~~y~~~~~~ 163 (337)
....|++..|.++||++|++|+..+++..+++++ +++|+|+++++.++++++. + |||+|++++|+|+.|..+++.
T Consensus 107 ~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~--I~it~Ga~~al~~~~~~l~~~--~gD~Vlv~~P~y~~y~~~~~~ 182 (481)
T PTZ00377 107 GTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSD--IFLTDGASSGIKLLLQLLIGD--PSDGVMIPIPQYPLYSAAITL 182 (481)
T ss_pred cccCcCcccCCHHHHHHHHHHHHHhcCCCCChhh--EEEcCCHHHHHHHHHHHhccC--CCCEEEECCCCchhHHHHHHH
Confidence 3467999999999999999999765555566666 5799999999999998876 5 899999999999999999999
Q ss_pred cCceeeEeeeccCCCCCCChHHHHHHHHcCC----CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC
Q 047180 164 AHVTQRTFHYYHPGTKGLDFAALMDDIKNAP----NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 164 ~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~----~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
+|++++.+++..+++|++|++.+++.++... +.+++++ +|||||||.++|++++++|+++|++++++||+||+|.
T Consensus 183 ~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l-~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~ 261 (481)
T PTZ00377 183 LGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVV-INPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQ 261 (481)
T ss_pred cCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEE-ECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhH
Confidence 9999999998544568999999999886321 2234444 6899999999999999999999999999999999999
Q ss_pred CCCCCCCccchHHHHH----hhhc---CCeEEEEeccccc-ccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCC
Q 047180 240 GFASGDPERDAKAIRI----FLKD---GHLLGLAQSYAKN-MGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNP 311 (337)
Q Consensus 240 ~~~~~~~~~~~~~~~~----~~~~---~~~~i~~~S~SK~-~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 311 (337)
++.+++. ....++.. +... ..++|+++||||. |+|||||+||+++...++++++++.. +.. ...++
T Consensus 262 ~l~~~~~-~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~----~~~-~~~~~ 335 (481)
T PTZ00377 262 ENIYDGE-KPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYK----LAS-INLCS 335 (481)
T ss_pred hhccCCC-CCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHH----Hhh-eecCC
Confidence 9986311 11112222 1111 1369999999997 69999999999863335666665543 222 23358
Q ss_pred ChhHHHHHHHHhCC
Q 047180 312 PVHGALIVSTILGD 325 (337)
Q Consensus 312 ~~~~q~~~~~~l~~ 325 (337)
+.++|.++..+|++
T Consensus 336 ~~~~Q~a~~~~l~~ 349 (481)
T PTZ00377 336 NVVGQLMTGLMCNP 349 (481)
T ss_pred ChHHHHHHHHHhCC
Confidence 88999999999974
No 17
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-42 Score=331.16 Aligned_cols=255 Identities=14% Similarity=0.136 Sum_probs=197.3
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc-CceeEEeeccc
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD-KRIAAVQSLSG 127 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~g~ 127 (337)
.++.++|++|.+. ..+++.+.+++.+. ......+|. ..|.++||++|++|+..+++..+++ ++ +++|+|+
T Consensus 31 ~~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~~~--I~it~G~ 102 (399)
T PRK07681 31 GHKMIDLSIGNPD-----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNADKE--VLLLMGS 102 (399)
T ss_pred CCCeEEeCCCCCC-----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCCCe--EEECCCc
Confidence 3578999999653 33566777777654 322345565 4799999999999997655554565 44 5789999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
++++.+++.++.+ |||+|++++|+|+.|...++..|++++++|+.+++++.+|++.+++.+.. +.+++ ++|||||
T Consensus 103 ~~al~~~~~~~~~--~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~--~~k~v-~l~~P~N 177 (399)
T PRK07681 103 QDGLVHLPMVYAN--PGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIAD--KAKMM-ILNFPGN 177 (399)
T ss_pred HHHHHHHHHHhCC--CCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccc--cceEE-EEeCCCC
Confidence 9999999887766 99999999999999999999999999999985444578899999887752 33444 4579999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
|||.++|.+++++|+++|++++++||+||+|.+|.++.. ...++..+....+++|+++||||.||+||+|+||+++
T Consensus 178 PTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-- 253 (399)
T PRK07681 178 PVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGN--KPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-- 253 (399)
T ss_pred CcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCC--CCCChhhCCCCcccEEEEeecccccCCccceeEEEec--
Confidence 999999999999999999999999999999999975421 1112222322335799999999999999999999975
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++++++++.. .......+++.+.|.++..+|+++
T Consensus 254 -~~~l~~~~~~----~~~~~~~~~s~~~q~~~~~~l~~~ 287 (399)
T PRK07681 254 -NEEIVRALTQ----FKSNTDYGVFLPIQKAACAALRNG 287 (399)
T ss_pred -CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHHhCc
Confidence 5666665543 222223357889999999999874
No 18
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-41 Score=325.64 Aligned_cols=275 Identities=19% Similarity=0.262 Sum_probs=208.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCce-eEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRI-AAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i-~~~~t~g~~~ 129 (337)
.+++|+++|.+.++ +.+...+.++++.++......++|++..|.++||+++++++.+++. .++++++ ++++|+|+++
T Consensus 3 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~ 80 (388)
T PRK08637 3 ATKYNATIGMATEK-GGPMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTH 80 (388)
T ss_pred ccceecceeeEecC-CCcchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHH
Confidence 46899999988644 4466777777776665344568999999999999999999876542 2332221 3689999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCceeeEeeeccCCCCCCChHHHHHHHHc-CCCCeEEEEeCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHVTQRTFHYYHPGTKGLDFAALMDDIKN-APNGSFFLLHACAHN 207 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~~~ili~~~p~N 207 (337)
++.+++.++.+ |||+|++++|+|+.|...+. ..|++++.+|+.. +++++|++++++.+.. .++.+.++++|||||
T Consensus 81 al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~-~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~N 157 (388)
T PRK08637 81 GLSLVADLFVD--QGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFD-EDGGFDTDALKEALQAAYNKGKVIVILNFPNN 157 (388)
T ss_pred HHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHhcCCEEEEecccC-CCCcCCHHHHHHHHHhhccCCCEEEEEeCCCC
Confidence 99999988876 99999999999999998865 6899999999832 2468999999988761 123456667799999
Q ss_pred CCCCCCCHHHHHHHHHHHHh-----cCceeEEcccCCCCCCCCCccchHHH-HHhhhcCCeEE--EEecccccccccccc
Q 047180 208 PTGVDPSEEQWKEISYQIKA-----KGHFPFFDMAYQGFASGDPERDAKAI-RIFLKDGHLLG--LAQSYAKNMGLYGQR 279 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~-----~~~~ii~De~Y~~~~~~~~~~~~~~~-~~~~~~~~~~i--~~~S~SK~~~~~G~R 279 (337)
|||.++|.+++++|+++|++ ++++||+||+|.+|.+++ ....++ ..+.+..++++ +++||||.|++||+|
T Consensus 158 PTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~--~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlR 235 (388)
T PRK08637 158 PTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYED--SYKESLFAALANLHSNILAVKLDGATKEEFVWGFR 235 (388)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCC--ccchhhHHHhhcccccceEEEeccccccCCCcccc
Confidence 99999999999999999875 899999999999998642 111222 22333334654 456999999999999
Q ss_pred cceeEeee---CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHH
Q 047180 280 VGCLSVLC---EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLW 332 (337)
Q Consensus 280 vG~~~~~~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w 332 (337)
+||++++. .++++++.+...+....+..++++|.++|.++..+|+++.+.+.+
T Consensus 236 lG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~ 291 (388)
T PRK08637 236 VGFITFGTKAGSSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEK 291 (388)
T ss_pred eEEEEEccccCCcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHH
Confidence 99998753 357777776554332223344578899999999999987665444
No 19
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.2e-41 Score=329.37 Aligned_cols=273 Identities=13% Similarity=0.090 Sum_probs=206.8
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
..++|+|++|.|.- -+.+.+++.+.+++.+ +......+|++..|.++||+++++|+..+++..+++++ +++|+|++
T Consensus 51 ~~~~i~l~~G~P~~-~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~--v~it~G~~ 127 (430)
T PLN00145 51 PRPVLPLGHGDPSA-FPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDD--IYLTAGCA 127 (430)
T ss_pred CCCeeeCCCCCCCC-CCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhh--EEEeCCHH
Confidence 45799999996531 1224456677777665 33334458999999999999999999665555566665 57999999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++.++.+ |||+|++++|+|+.|...+...|++++.+++..+++|++|++.+++.+.. +.+.++ ++|||||
T Consensus 128 ~al~l~~~~l~~--~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~i~-i~~P~NP 202 (430)
T PLN00145 128 QAIEIIMSVLAQ--PGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADE--NTVAMV-IINPNNP 202 (430)
T ss_pred HHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCc--CceEEE-EeCCCCC
Confidence 999999988876 99999999999999999999999999999875555789999999887653 334444 4889999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|++++++||+||+|.+|.+++ ....++..+.. ..++|+++||||.|++||||+||++++.+
T Consensus 203 tG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~--~~~~~~~~~~~-~~~vi~~~S~SK~~~~pG~RlG~iv~~~~ 279 (430)
T PLN00145 203 CGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGS--KPFVPMGVFGE-VAPVLTLGSISKRWVVPGWRLGWIATCDP 279 (430)
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCC--CCccchhhhcc-cCcEEEEeccccccCCCCeeEEEEEEecc
Confidence 9999999999999999999999999999999998642 11223333322 45899999999999999999999987422
Q ss_pred CHHHHHH--HHHHHHhhhcccccCCChhHHHHHHHHhCC--HHHHHHHHhh
Q 047180 289 DEKQAVA--VKSQLQQLARPMYSNPPVHGALIVSTILGD--AELKKLWLKE 335 (337)
Q Consensus 289 ~~~~~~~--~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~w~~e 335 (337)
..+++. +...+.... ..+.+++.+.|.++..+|++ .++.++.+++
T Consensus 280 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~ 328 (430)
T PLN00145 280 -NGILKETKVVDSIRNYL-NISTDPATFVQGAIPQIIANTKEEFFTKTLGL 328 (430)
T ss_pred -hhhhhhhHHHHHHHHHh-cccCCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 222222 233344332 34446789999999999986 3444444443
No 20
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.2e-41 Score=331.63 Aligned_cols=265 Identities=15% Similarity=0.130 Sum_probs=197.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
.++++|++|.|... ...+++.+.+++.++ ......+|+|..|.++||+++++|+.++++..+++++ +++|+|+++
T Consensus 32 ~~~~~~~~G~p~~~--~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~--I~it~G~~~ 107 (433)
T PRK06855 32 VKITWENIGDPIAK--GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDD--IIFFNGLGD 107 (433)
T ss_pred ccccccccCCCccc--CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhH--EEEcCcHHH
Confidence 46799999975311 234567777777664 3344578999999999999999999776555567776 579999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH-HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW-RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~-~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
++.+++. +.. |||.|++++|+|+.|.... ...|.+++.+|+...++|++|++.+++.+...++.++++ +||||||
T Consensus 108 al~~~~~-l~~--~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~-l~~P~NP 183 (433)
T PRK06855 108 AIAKIYG-LLR--REARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGIL-LINPDNP 183 (433)
T ss_pred HHHHHHH-hcC--CCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEE-EECCCCC
Confidence 9998875 444 8999999999999987653 456889999998544568899999999886433334444 4799999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.++|.+++++|+++|+++|++||+||+|.+|.+++ ....++..+.. ..++|+++||||+|++||||+||++++.+
T Consensus 184 TG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~--~~~~sl~~~~~-~~~~I~~~S~SK~~~~pGlRiG~ii~p~~ 260 (433)
T PRK06855 184 TGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG--KKTVPLSEVIG-DVPGIALKGISKELPWPGSRCGWIEVYNA 260 (433)
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCCHHHHcC-cCCeEEEecCccccCCCcceEEEEEEeCC
Confidence 9999999999999999999999999999999998642 11223333322 23689999999999999999999997522
Q ss_pred C-HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 289 D-EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 289 ~-~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
+ +..+.++...+..... ...+++.+.|.++..+|++++
T Consensus 261 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~Q~a~~~~l~~~~ 299 (433)
T PRK06855 261 DKDEVFKKYINSILNAKM-IEVCSTTLPQMAIPRIMSHPE 299 (433)
T ss_pred chhhHHHHHHHHHHHhhc-cccCCChHHHHHHHHhhcCCc
Confidence 1 1222233333332222 233578899999999998753
No 21
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-41 Score=326.71 Aligned_cols=252 Identities=17% Similarity=0.193 Sum_probs=196.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHH-HHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVRE-AERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~-a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
++.+||+.|.+. ..+++.+.+ +...+.. ....|++..|.++||+++++|+.++++..+++++ +++|+|+++
T Consensus 29 ~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~--i~it~G~~~ 100 (384)
T PRK06348 29 PDIIDLSLGDPD-----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNE--IMATVGACH 100 (384)
T ss_pred CCcEEcCCCCCC-----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhh--EEEcCChHH
Confidence 468999999653 333455544 3333322 3567999999999999999999665544466666 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++.++.. |||+|++++|+|+.|...++..|++++.+|+.+.+++.+|++.+++.+.. +.+++++ |+|||||
T Consensus 101 al~~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~v~l-~~p~NPt 175 (384)
T PRK06348 101 GMYLALQSILD--PGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITS--KTKAIIL-NSPNNPT 175 (384)
T ss_pred HHHHHHHHhcC--CCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCc--CccEEEE-eCCCCCC
Confidence 99999988766 99999999999999999999999999999875444678999999987753 3345555 7899999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.++|.+++++|+++|++++++||+||+|.+|.++. ...++..+....+++|+++||||+||+||+|+||+++ +
T Consensus 176 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~---~ 249 (384)
T PRK06348 176 GAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE---DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIA---P 249 (384)
T ss_pred CcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCC---CccchhhcCCCcCcEEEEecchhccCCccccceeeec---C
Confidence 999999999999999999999999999999997642 1123333432246899999999999999999999986 3
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+++++.+. .+......+++.++|.++..+|.+
T Consensus 250 ~~~~~~~~----~~~~~~~~~~~~~~q~~~~~~l~~ 281 (384)
T PRK06348 250 DYIIETAK----IINEGICFSAPTISQRAAIYALKH 281 (384)
T ss_pred HHHHHHHH----HHHHhccCCCCHHHHHHHHHHHhC
Confidence 44444443 333333335788999999999976
No 22
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-41 Score=328.13 Aligned_cols=279 Identities=13% Similarity=0.097 Sum_probs=200.3
Q ss_pred CCCCCCCchhhHHHHHhc--CCCCCeeEeeeeeeecCCCCcccchHH-HHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHH
Q 047180 30 VEPAAKDPILGVTEAFLA--DPSPDKVNVGVGAYRDDNGKPVVLECV-REAERRIAGTANMEYLPMGGSVKMVEETLKLA 106 (337)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~~~~~~~v-~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~ 106 (337)
+...+..++..+....++ ...++.++|+.|.+. ...++.+ .++.+.+......+|++..|.++||+++|+|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l 84 (403)
T PRK08636 10 IKRLPKYVFAEVNELKMAARRAGEDIIDFSMGNPD-----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWY 84 (403)
T ss_pred HHhCCccHHHHHHHHHHHHHhcCCCEEEcCCcCCC-----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHH
Confidence 334444444444443322 123568999999653 1123434 33333343334578999999999999999999
Q ss_pred hCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHH
Q 047180 107 YGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAAL 186 (337)
Q Consensus 107 ~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l 186 (337)
..+++..+++++ ++++|+|+++++.++++++.. |||+|++++|+|+.|..+++..|++++++|+..++++++|++.+
T Consensus 85 ~~~~~~~~~~~~-~I~it~G~~~al~~~~~~l~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 161 (403)
T PRK08636 85 KRKYNVDLDPET-EVVATMGSKEGYVHLVQAITN--PGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQF 161 (403)
T ss_pred HHHhCCCCCCCC-eEEECCChHHHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhh
Confidence 655444455542 257999999999999988877 99999999999999999999999999999973233588998755
Q ss_pred ----HHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCe
Q 047180 187 ----MDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHL 262 (337)
Q Consensus 187 ----~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 262 (337)
++.+.+...+..+++.||||||||.++|.+++++|+++|++|+++||+||+|.+|.++.. ...++..+....++
T Consensus 162 ~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~--~~~~~~~~~~~~~~ 239 (403)
T PRK08636 162 FENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGY--KTPSILEVEGAKDV 239 (403)
T ss_pred hhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCC--CCCChhcCCCcccc
Confidence 444443223445556689999999999999999999999999999999999999976421 11233333322356
Q ss_pred EEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 263 LGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 263 ~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+|+++||||+||+||+|+||+++ ++++++++... ......+++.+.|.++..++++
T Consensus 240 ~i~~~S~SK~~~~~GlRiG~iv~---~~~li~~~~~~----~~~~~~~~~~~~q~~~~~~~~~ 295 (403)
T PRK08636 240 AVESYTLSKSYNMAGWRVGFVVG---NKKLVGALKKI----KSWLDYGMFTPIQVAATIALDG 295 (403)
T ss_pred EEEEEecccccCCccceeeeeeC---CHHHHHHHHHH----HHHhcccCChHHHHHHHHHHhC
Confidence 78899999999999999999875 56666665542 2222234567789988888863
No 23
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-41 Score=309.70 Aligned_cols=264 Identities=16% Similarity=0.124 Sum_probs=219.7
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
++++-+-+.. -++..+|.|.+|+++..+...+||+ .+..+|.+++++|.+.++++.++++. ++.++|..-+
T Consensus 25 ~DvlPmWVAD-----MDf~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~e~--i~~~p~VVpg 95 (388)
T COG1168 25 EDVLPMWVAD-----MDFPTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKPEW--IVFVPGVVPG 95 (388)
T ss_pred CCcceeeeec-----ccCCCCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCcce--EEEcCcchHh
Confidence 4667777664 3477889999998875344578896 67889999999999999988888876 4788999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc-CCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH-PGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
+.++++.+++ |||.|++.+|.|++|...++..|+++++.|+.. ...|.+|+++|++++.. .+..++++|||||||
T Consensus 96 i~~~I~~~T~--~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~--~~vkl~iLCnPHNP~ 171 (388)
T COG1168 96 ISLAIRALTK--PGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVD--ERVKLFILCNPHNPT 171 (388)
T ss_pred HHHHHHHhCc--CCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhc--CCccEEEEeCCCCCC
Confidence 9999999998 999999999999999999999999999999853 33578899999999975 334566679999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEecccccccccccccceeEeeeC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
|.|||++|+++|+++|++||+.||+||+++|++..+. .. .+...+... .++++++.|.||+|+++|+..+++++ +
T Consensus 172 Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~-~h-~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii--~ 247 (388)
T COG1168 172 GRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGH-KH-IPFASLSERFADNSITLTSASKTFNLAGLKCAYIII--S 247 (388)
T ss_pred CccccHHHHHHHHHHHHHcCCEEEeecccccccccCC-Cc-cchhhcChhhhcceEEEeeccccccchhhhheeEEe--c
Confidence 9999999999999999999999999999999996421 11 122222221 47899999999999999999999987 6
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhhhC
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKEVQ 337 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~el~ 337 (337)
|++.++++.+.+... ...++|.++..+..+++++ .+.|++||+
T Consensus 248 n~~lr~~~~~~l~~~---~~~~~n~lg~~A~~aAY~~---G~~WLd~L~ 290 (388)
T COG1168 248 NRELRAKFLKRLKRN---GLHGPSALGIIATEAAYNQ---GEPWLDELL 290 (388)
T ss_pred CHHHHHHHHHHHHHh---cCCCCchHHHHHHHHHHHh---chHHHHHHH
Confidence 999888888776643 4567899999999999997 688888873
No 24
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-41 Score=325.26 Aligned_cols=256 Identities=13% Similarity=0.074 Sum_probs=195.7
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
.++.++|+.|.+. ..+++.+.+++.+. .......|++..|.++||+++++|+.++++..+++++ .++.|+|++
T Consensus 30 ~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-~ii~t~G~~ 103 (385)
T PRK09276 30 GVDVISLGIGDPD-----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPET-EVISLIGSK 103 (385)
T ss_pred CCCEEEecCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcH
Confidence 4578999999642 34566777777653 3333468999999999999999999654333344443 256789999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++.++.. |||+|++++|+|+.|...++..|++++.+|+.+++++.+|++.+++.+.. +.+++++ ||||||
T Consensus 104 ~~i~~~~~~~~~--~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~--~~~~v~l-~~p~NP 178 (385)
T PRK09276 104 EGIAHIPLAFVN--PGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAK--KAKLMFI-NYPNNP 178 (385)
T ss_pred HHHHHHHHHhCC--CCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccc--cceEEEE-eCCCCC
Confidence 999999888766 99999999999999999999999999999985444577899999887652 3344444 789999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|++++++||+||+|.+|.++.. ...++..+....+++++++||||.||+||+|+||+++
T Consensus 179 tG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~--- 253 (385)
T PRK09276 179 TGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGY--KPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG--- 253 (385)
T ss_pred CCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCC--CCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC---
Confidence 99999999999999999999999999999999875311 1122222322235789999999999999999999985
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++.. +......+++.+.|.++..+|++
T Consensus 254 ~~~l~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~ 286 (385)
T PRK09276 254 NADLIAGLGK----VKSNVDSGVFQAIQEAGIAALNG 286 (385)
T ss_pred CHHHHHHHHH----HHhhccCCCCHHHHHHHHHHHcC
Confidence 5666665543 22223345677889999999975
No 25
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=5.3e-41 Score=325.03 Aligned_cols=271 Identities=17% Similarity=0.096 Sum_probs=206.4
Q ss_pred CCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 49 PSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 49 ~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...++|+|++|.|... ..+.+++.+.+++.+. ......+|+|..|.++||+++++|+...++..+++++ +++|+|+
T Consensus 29 ~~~~~i~l~~G~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~--i~~t~G~ 105 (409)
T PLN02656 29 NGKRVISLGMGDPTAY-SCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDD--VFITSGC 105 (409)
T ss_pred cCCeeeecCCCCCCcC-CCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCccc--EEEeCCh
Confidence 3468999999976311 1245567777777653 4444578999999999999999999665444466665 5789999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
++++.+++.++.. |||+|++++|+|+.|...++..|++++.+|+..++++.+|++.+++.+.. ..++++ +++|||
T Consensus 106 ~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~--~~~~v~-l~~P~N 180 (409)
T PLN02656 106 TQAIDVALSMLAR--PGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQ--NTVALV-IINPGN 180 (409)
T ss_pred HHHHHHHHHHHhC--CCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhcc--CceEEE-EECCCC
Confidence 9999999887766 99999999999999999999999999999985444678999999887753 334444 478999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
|||.++|.+++++|+++|++++++||+||+|.+|.+++. ...++..+ ....++|+++||||+|++||||+||++++.
T Consensus 181 PtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~ 257 (409)
T PLN02656 181 PCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSN--PFVPMGVF-GSIVPVLTLGSLSKRWIVPGWRLGWFVTTD 257 (409)
T ss_pred CCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC--CcccHHHh-cccCcEEEEcccchhccCcceeEEEEEEeC
Confidence 999999999999999999999999999999999986421 11223333 223589999999999999999999998742
Q ss_pred C-----CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC--HHHHHHHHhh
Q 047180 288 E-----DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD--AELKKLWLKE 335 (337)
Q Consensus 288 ~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~w~~e 335 (337)
+ ++++++++.. ... .+.+++.+.|.++..+|++ .++.++.+++
T Consensus 258 ~~~~~~~~~~~~~~~~----~~~-~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~ 307 (409)
T PLN02656 258 PSGSFRDPKIVERIKK----YFD-ILGGPATFIQAAVPTILEQTDESFFKKTINI 307 (409)
T ss_pred cccccccHHHHHHHHH----HHh-hhcCCCHHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 2 3455555543 222 2446789999999999974 3444444443
No 26
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.8e-41 Score=325.84 Aligned_cols=264 Identities=15% Similarity=0.117 Sum_probs=199.9
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcc-cccCceeEEeeccc
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEF-IKDKRIAAVQSLSG 127 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~-~~~~~i~~~~t~g~ 127 (337)
..++++|++|.+. ..+++.+.+++.+ +.......|++ .|.++||+++++|+..+++.. +++++ ++++|+|+
T Consensus 43 ~~~~i~L~~g~p~-----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~-~I~it~Gs 115 (410)
T PRK06290 43 DMELIDMGVGEPD-----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVT-EVIHSIGS 115 (410)
T ss_pred CCCeEEcCCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcc-eEEEccCH
Confidence 3468999999753 3355666666654 32223456865 899999999999996654443 55541 25799999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
++++.++++++.. +||+|++++|+|+.|...++..|++++.+|+..++++.+|++.+++.+.. +.+++++ |||||
T Consensus 116 ~~al~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~--~~k~i~l-~nP~N 190 (410)
T PRK06290 116 KPALAMLPSCFIN--PGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKE--KAKLLYL-NYPNN 190 (410)
T ss_pred HHHHHHHHHHhCC--CCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcc--cceEEEE-ECCCC
Confidence 9999999988776 99999999999999999999999999999985444577899999887753 3345554 78999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
|||.++|.+++++|+++|++++++||+||+|.++.+++ ...++..+....+++|+++||||.||+||+|+||+++
T Consensus 191 PTG~v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~---~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-- 265 (410)
T PRK06290 191 PTGAVATKEFYEEVVDFAKENNIIVVQDAAYAALTFDG---KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-- 265 (410)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEecchhhceeCC---CCcChhcCCCccccEEEEeechhhcCCchhheEeEEe--
Confidence 99999999999999999999999999999999997542 1112222322235789999999999999999999985
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
++++++.+.. .......+++.+.|.++..+|+++++.++++++
T Consensus 266 -~~~l~~~l~~----~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~ 308 (410)
T PRK06290 266 -NELIVKAFAT----VKDNNDSGQFIAIQKAGIYALDHPEITEKIREK 308 (410)
T ss_pred -CHHHHHHHHH----HHhccccCCcHHHHHHHHHHhhCcHHHHHHHHH
Confidence 4555555443 333334456678999999999986655554444
No 27
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=6.7e-41 Score=322.71 Aligned_cols=281 Identities=15% Similarity=0.078 Sum_probs=207.4
Q ss_pred CchhhHHHHHhc---CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCc
Q 047180 36 DPILGVTEAFLA---DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSE 112 (337)
Q Consensus 36 ~~~~~~~~~~~~---~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~ 112 (337)
+.+..+...+.+ ..+.+.++|++|++. ..+++.+.+++++... ....|++..|.++||+++|+|+.++++.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~i~l~~~~p~-----~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~ 83 (393)
T TIGR03538 10 YPFEKLAALLAGVTPPASKPPIALSIGEPK-----HPTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDL 83 (393)
T ss_pred cHHHHHHHHHHhhhhhcCCCeEEecCCCCC-----CCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCC
Confidence 345455444432 234678999999753 3456778887765322 3568999999999999999999665432
Q ss_pred c--cccCceeEEeeccchhHHHHHHHHHhhhCCCCe--EEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHH
Q 047180 113 F--IKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ--IYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMD 188 (337)
Q Consensus 113 ~--~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~--Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~ 188 (337)
. +++++ .+++|+|+++++.++++++.. |||+ |++++|+|+.|..+++..|++++.+|+.+++++.+|++.+++
T Consensus 84 ~~~~~~~~-~i~it~Ga~~al~~~~~~l~~--~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 160 (393)
T TIGR03538 84 PTGVDPER-HVLPVNGTREALFAFAQAVIN--PGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPE 160 (393)
T ss_pred cccCCCCc-eEEECCCcHHHHHHHHHHHcC--CCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHH
Confidence 2 45532 257899999999999988776 8986 999999999999999999999999998544457889999988
Q ss_pred HHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh----cCCeEE
Q 047180 189 DIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK----DGHLLG 264 (337)
Q Consensus 189 ~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~----~~~~~i 264 (337)
++.+ +.+++++ ||||||||.++|.+++++|+++|++++++||+||+|.++.+++..........+.. ..+++|
T Consensus 161 ~~~~--~~k~i~l-~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 237 (393)
T TIGR03538 161 SVWR--RCQLLFV-CSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCL 237 (393)
T ss_pred HHhh--cceEEEE-eCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEE
Confidence 7753 3345554 79999999999999999999999999999999999999875421011111111111 236899
Q ss_pred EEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 265 LAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 265 ~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
+++||||.|++||+|+||+++ ++++++++.. +......+++.+.|.++...+.+.++.++.+++
T Consensus 238 ~i~S~SK~~~~~GlRvG~~i~---~~~l~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 301 (393)
T TIGR03538 238 VFHSLSKRSNLPGLRSGFVAG---DAEILKAFLR----YRTYHGCAMPIPTQLASIAAWNDEQHVRENRAL 301 (393)
T ss_pred EEecchhhcCCcccceEEEec---CHHHHHHHHH----HHHhhccCcCHHHHHHHHHHhcChHHHHHHHHH
Confidence 999999999999999999875 4566555543 222222356788999988888876555554443
No 28
>PLN02231 alanine transaminase
Probab=100.00 E-value=1.1e-40 Score=330.90 Aligned_cols=261 Identities=16% Similarity=0.128 Sum_probs=198.8
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhc---CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIA---GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~---~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
.++.|+|+.|. ..++...+.+|.+.+. .....+|+++.|.++||++||+|+.++++..+++++ +++|+|
T Consensus 128 ~p~~i~~~~~~------~~fp~~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~--I~iT~G 199 (534)
T PLN02231 128 HPSLLDKSETH------GLFSADAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADPND--IFLTDG 199 (534)
T ss_pred CCccCCCCCcc------ccCCHHHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCccc--EEEeCC
Confidence 35677776542 1233455666665552 223578999999999999999999877665566776 579999
Q ss_pred chhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeC
Q 047180 127 GTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHA 203 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~ 203 (337)
+++++.++++++.. .+||+|+++.|+|+.|...++..|+++++|++..+++|++|+++|++.++... .+..+++++
T Consensus 200 a~~ai~~~~~~l~~-~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~ 278 (534)
T PLN02231 200 ASPAVHMMMQLLIR-SEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVI 278 (534)
T ss_pred HHHHHHHHHHHhcc-CCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEe
Confidence 99999999988752 17999999999999999999999999999998544568999999999886421 123344447
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh------cCCeEEEEecccccc-ccc
Q 047180 204 CAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK------DGHLLGLAQSYAKNM-GLY 276 (337)
Q Consensus 204 ~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~------~~~~~i~~~S~SK~~-~~~ 276 (337)
|||||||.++|++++++|+++|++++++||+||+|.++.+++. ....++..+.. ...++++++||||.| |+|
T Consensus 279 nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~-~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~p 357 (534)
T PLN02231 279 NPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPD-KKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGEC 357 (534)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCcccHHHHHhhhccccCCceEEEEeccCcccccCC
Confidence 9999999999999999999999999999999999999986321 11223333321 123689999999975 899
Q ss_pred ccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|||+||++++..++++++++... .. ...+++..+|.++..++++
T Consensus 358 GlRiGy~~~~~~~~~l~~~l~k~----~~-~~~~s~~~~Q~~~~~~l~~ 401 (534)
T PLN02231 358 GKRGGYMEVTGFTSDVREQIYKV----AS-VNLCSNISGQILASLVMSP 401 (534)
T ss_pred ccceEEEEEecCCHHHHHHHHHH----Hh-hhcCCChHHHHHHHHHhCC
Confidence 99999998754467776666542 22 2346678899999999975
No 29
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=8.8e-41 Score=320.78 Aligned_cols=258 Identities=14% Similarity=0.077 Sum_probs=197.0
Q ss_pred CCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 49 PSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 49 ~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
.++++++|+.|.+. ..+++.+.+++.+. .....++|++..|.++||+++++|+..+++...++++ .+++|+|+
T Consensus 27 ~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~-~vi~t~G~ 100 (383)
T TIGR03540 27 EGVDVISLGIGDPD-----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPET-EVLSLIGS 100 (383)
T ss_pred cCCCeEEeCCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCC-eEEECCCc
Confidence 34678999999642 33456677766553 3334578999999999999999998654433344442 25788999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
++++.+++..+.. +||+|++++|+|+.|..+++..|++++++|+..++++.+|++++++.+.. +.+++++ |||||
T Consensus 101 ~~~l~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~--~~~~v~i-~~P~N 175 (383)
T TIGR03540 101 KEGIAHIPLAFVN--PGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAK--KAKLMFI-NYPNN 175 (383)
T ss_pred HHHHHHHHHHhCC--CCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccc--cceEEEE-eCCCC
Confidence 9999999988766 99999999999999999999999999999985444577899999887752 3344554 78999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
|||.++|.+++++|+++|++++++||+||+|.++.+++. ...++..+....+++++++||||.||++|+|+||+++
T Consensus 176 PtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-- 251 (383)
T TIGR03540 176 PTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGY--KAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-- 251 (383)
T ss_pred CcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCC--CCcCcccCCCcccCEEEEEecccccCCccceeeEEeC--
Confidence 999999999999999999999999999999999876321 1122222222235789999999999999999999975
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++++++++.. +......+++.+.|.++..+|++.
T Consensus 252 -~~~l~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~ 285 (383)
T TIGR03540 252 -NADLIAGLGK----VKTNVDSGVFQAIQYAAIAALNGP 285 (383)
T ss_pred -CHHHHHHHHH----HHHhcccCCChHHHHHHHHHHhCC
Confidence 5666665543 222233456778999999999873
No 30
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=1.4e-40 Score=321.26 Aligned_cols=276 Identities=14% Similarity=0.121 Sum_probs=208.7
Q ss_pred CchhhHHHHHhcCCC--CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCc
Q 047180 36 DPILGVTEAFLADPS--PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSE 112 (337)
Q Consensus 36 ~~~~~~~~~~~~~~~--~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~ 112 (337)
+++..+.+.++.+.. .+.++|++|.+..+ ++..+++.+.+++.+. ......+|.|..|.++||+++++|+.+.+.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~~- 91 (401)
T TIGR01264 14 NPIRAIVDNMKVKPNPEKPMIKLSIGDPTVF-GNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNPDG- 91 (401)
T ss_pred hHHHHHHHHHHhhhhcCCCeeecCCCCCCCc-CCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhcCC-
Confidence 446666666666543 46799999987421 2345667777777654 333346799999999999999999865433
Q ss_pred ccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc
Q 047180 113 FIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN 192 (337)
Q Consensus 113 ~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~ 192 (337)
.+++++ +++|+|+++++.+++.++.. +||+|++++|+|+.|..+++..|++++.+++..++++++|++.+++.+..
T Consensus 92 ~~~~~~--i~~t~G~~~al~~~~~~l~~--~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~ 167 (401)
T TIGR01264 92 PIEADD--VVLCSGCSHAIEMCIAALAN--AGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDE 167 (401)
T ss_pred CCCHHH--EEECcChHHHHHHHHHHhCC--CCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhcc
Confidence 355665 57899999999999988876 89999999999999999999999999999885444689999999887753
Q ss_pred CCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccc
Q 047180 193 APNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKN 272 (337)
Q Consensus 193 ~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 272 (337)
..+++ ++||||||||.+++.+++++|+++|++++++||+||+|.+|.++. ....++..+.. ..++|+++||||+
T Consensus 168 --~~~~v-~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~-~~~vi~~~SfSK~ 241 (401)
T TIGR01264 168 --KTAAL-IVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSG--ATFEPLASLSS-TVPILSCGGLAKR 241 (401)
T ss_pred --CceEE-EEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCC--cccccHHHcCC-CCcEEEEccCccc
Confidence 23444 558999999999999999999999999999999999999997532 11223333322 2369999999999
Q ss_pred ccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 273 MGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 273 ~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|++||+|+||++++.+ .+.+..+.+.+..+.. ...+++.+.|.++..+|++
T Consensus 242 ~~~~GlRiG~iv~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~ 292 (401)
T TIGR01264 242 WLVPGWRLGWIIIHDR-RGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLR 292 (401)
T ss_pred CCCccceEEEEEecCc-chhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHh
Confidence 9999999999997422 2233334444444333 2345788999999999975
No 31
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.2e-40 Score=320.49 Aligned_cols=263 Identities=15% Similarity=0.122 Sum_probs=195.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
++.++|+.|.+. ..+++.+.+++.+. .......|+|..|.++||+++++|+..+++..+++++ ++++|+|+++
T Consensus 32 ~~~i~l~~~~p~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~-~i~it~G~~~ 105 (389)
T PRK08068 32 HDVINLGQGNPD-----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPET-EVAILFGGKA 105 (389)
T ss_pred CCeEEecCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-cEEEcCCcHH
Confidence 568999999642 33446677766553 3334568998999999999999998644333355551 2478999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++.++.. +||+|++++|+|+.|...++..|++++.+|+.+++++.+|++++++.+.. +.++++ +|||||||
T Consensus 106 ~l~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~--~~~~v~-l~~P~NPT 180 (389)
T PRK08068 106 GLVELPQCLMN--PGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAE--KAKLMY-LNYPNNPT 180 (389)
T ss_pred HHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccc--cceEEE-EECCCCCC
Confidence 99998877766 99999999999999999999999999999985444678899999887752 334444 48999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.++|.+++++|+++|++++++||+||+|.+|.+++ ....+........+++++++||||+||+||+|+||+++ +
T Consensus 181 G~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~--~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~---~ 255 (389)
T PRK08068 181 GAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDG--QKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG---N 255 (389)
T ss_pred CCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCC--CCCcChhhCCCccCCEEEEecchhccCCccceeEeEec---C
Confidence 999999999999999999999999999999987531 11112111122235789999999999999999999974 5
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC-CHHHHHHHH
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG-DAELKKLWL 333 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~-~~~~~~~w~ 333 (337)
+++++++.. .......+.+...|.++..+|. +++..++.+
T Consensus 256 ~~l~~~l~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 296 (389)
T PRK08068 256 ESVIEAINL----LQDHLFVSLFGAIQDAAIEALLSDQSCVAELV 296 (389)
T ss_pred HHHHHHHHH----HHhhccCCCChHHHHHHHHHHhCcHHHHHHHH
Confidence 666666543 2222333455567888888775 344333333
No 32
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.9e-41 Score=323.39 Aligned_cols=255 Identities=14% Similarity=0.084 Sum_probs=195.8
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc-CceeEEeeccch
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD-KRIAAVQSLSGT 128 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~g~~ 128 (337)
.+.++|++|.+. . ..+++.+.+++.+ +......+|++..|.++||+++++|+.+..+..+++ ++ +++|+|++
T Consensus 39 ~~~i~l~~g~~~---~-~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~--I~it~Ga~ 112 (405)
T PRK06207 39 GRPVDFSHGDVD---A-HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADE--LIITPGTQ 112 (405)
T ss_pred CCceecCCcCCC---C-CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC--EEEeCCcH
Confidence 468999999652 1 2344556555444 433345689999999999999999986554433444 55 57999999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc---CCCCCCChHHHHHHHHcCCCCeEEEEeCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH---PGTKGLDFAALMDDIKNAPNGSFFLLHACA 205 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~---~~~~~~d~~~l~~~l~~~~~~~~ili~~~p 205 (337)
+++.+++.++.. |||+|++++|+|+.|...++..|++++++++.. ++++++|++.+++.+.. ..++ +++|||
T Consensus 113 ~al~~~~~~l~~--~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~--~~k~-v~l~~P 187 (405)
T PRK06207 113 GALFLAVAATVA--RGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKA--GVRV-FLFSNP 187 (405)
T ss_pred HHHHHHHHHhcC--CCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhh--cCeE-EEECCC
Confidence 999999988776 999999999999999999999999999998741 23588999999988763 2334 445899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
|||||.+++.+++++|+++|++++++||+||+|.+|.++.. ...++..+....+++++++||||.|++||+|+||+++
T Consensus 188 ~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~--~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~ 265 (405)
T PRK06207 188 NNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGT--SYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFG 265 (405)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCCchhcCCCCcCcEEEEecchhhccCcccceEEEEc
Confidence 99999999999999999999999999999999999976321 1112222222346899999999999999999999975
Q ss_pred eeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 286 LCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 286 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++.. .......+.+.++|.++..+|++
T Consensus 266 ---~~~l~~~~~~----~~~~~~~~~~~~~q~a~~~~l~~ 298 (405)
T PRK06207 266 ---SPAIIDRMEK----LQAIVSLRAAGYSQAVLRTWFSE 298 (405)
T ss_pred ---CHHHHHHHHH----HHhHhccCCCHHHHHHHHHHHhC
Confidence 4666665543 22223345677899999999986
No 33
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=2.2e-40 Score=320.98 Aligned_cols=276 Identities=14% Similarity=0.119 Sum_probs=205.7
Q ss_pred chhhHHHHHhc-CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCC----
Q 047180 37 PILGVTEAFLA-DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDN---- 110 (337)
Q Consensus 37 ~~~~~~~~~~~-~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~---- 110 (337)
++.....++.. ...+++|+|++|.|.. +++..+++.+.+++.+. ......+|++..|.++||+++++|+..++
T Consensus 18 ~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~ 96 (412)
T PTZ00433 18 PLRTVTDNAKPSPSPKSIIKLSVGDPTL-DGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKE 96 (412)
T ss_pred cHHHHHHhhccCCCCCCeeecCCcCCCC-cCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccc
Confidence 34455555544 3456899999997631 12234677788887664 33345789999999999999999986432
Q ss_pred --CcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHH
Q 047180 111 --SEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMD 188 (337)
Q Consensus 111 --~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~ 188 (337)
+..+++++ +++|+|+++++.+++.++.. |||+|++++|+|+.|...++..|++++.+|+..++++++|++.+++
T Consensus 97 ~~~~~~~~~~--i~it~G~~~al~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~ 172 (412)
T PTZ00433 97 SLKSTIKKDN--VVLCSGVSHAILMALTALCD--EGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRR 172 (412)
T ss_pred cccCCCChhh--EEEeCChHHHHHHHHHHhcC--CCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHH
Confidence 23355665 57999999999999988766 9999999999999999999999999999998544468999999988
Q ss_pred HHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEec
Q 047180 189 DIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 189 ~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
.+.. ..++++ +||||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ ....++..+.. ..++|+++|
T Consensus 173 ~~~~--~~~~i~-~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~-~~~~i~~~S 246 (412)
T PTZ00433 173 LVDD--RTKALI-MTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNG--ATFTSVADFDT-TVPRVILGG 246 (412)
T ss_pred Hhcc--CceEEE-EeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCC--CCccchhhccC-CCceEEEcc
Confidence 7753 334444 58999999999999999999999999999999999999997642 11123333322 236899999
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|||.||+||+|+||+++..+.. ..+.+.+.+..+.. ...+++.+.|.++..+|.+
T Consensus 247 fSK~~~~pGlRlG~~i~~~p~~-~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 247 TAKNLVVPGWRLGWLLLVDPHG-NGGDFLDGMKRLGM-LVCGPCSVVQAALGEALLN 301 (412)
T ss_pred chhhcCCCCeeEEEEEEeCCcc-cHHHHHHHHHHHhh-ccCCCChHHHHHHHHHHhc
Confidence 9999999999999998732210 11223333333322 2336789999999999975
No 34
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.7e-40 Score=319.29 Aligned_cols=270 Identities=16% Similarity=0.189 Sum_probs=203.9
Q ss_pred CCCCCCchhhHHHHHhc--CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhC
Q 047180 31 EPAAKDPILGVTEAFLA--DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYG 108 (337)
Q Consensus 31 ~~~~~~~~~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 108 (337)
.+.....+..+....++ ...++.++|+.|.+. .++++.+.+++.+.......+|.+..|.++||+++++|+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-----~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~ 84 (387)
T PRK08960 10 RDIEPFHVMALLARANELEAAGHDVIHLEIGEPD-----FTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQ 84 (387)
T ss_pred HhCCchHHHHHHHHHHHHHhcCCCeEEeCCCCCC-----CCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHH
Confidence 33344455555544432 123578999999652 34567787777664222345799999999999999999864
Q ss_pred CCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHH
Q 047180 109 DNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMD 188 (337)
Q Consensus 109 ~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~ 188 (337)
+++..+++++ +++|.|+++++.+++.++.. |||+|++++|+|+.|...++..|++++.+|+..+.++.+|++.+++
T Consensus 85 ~~g~~~~~~~--i~it~G~~~al~~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 160 (387)
T PRK08960 85 RYGVDVDPER--ILVTPGGSGALLLASSLLVD--PGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVER 160 (387)
T ss_pred HhCCCCChhh--EEEccCcHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHH
Confidence 4333355665 57899999999999987765 9999999999999999999999999999998444467899999988
Q ss_pred HHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEec
Q 047180 189 DIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 189 ~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
.+.+ . +.++++++||||||.+++.+++++|+++|++++++||+||+|.+|.+++ ...++ ....+++++++|
T Consensus 161 ~~~~--~-~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~---~~~~~---~~~~~~vi~~~S 231 (387)
T PRK08960 161 HWNA--D-TVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGV---DAASV---LEVDDDAFVLNS 231 (387)
T ss_pred HhCc--c-ceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCh---hhccCCEEEEee
Confidence 7753 2 3344458899999999999999999999999999999999999987532 11122 223468999999
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|||.||++|+|+||+++ +++.++++. .+......+++.+.|.++..+|.+
T Consensus 232 ~SK~~g~~GlRiG~~~~---~~~~~~~~~----~~~~~~~~~~s~~~q~a~~~~l~~ 281 (387)
T PRK08960 232 FSKYFGMTGWRLGWLVA---PPAAVPELE----KLAQNLYISASTPAQHAALACFEP 281 (387)
T ss_pred cccccCCcccEEEEEEc---CHHHHHHHH----HHHhhhccCCCHHHHHHHHHHhhc
Confidence 99999999999999986 345555443 333333346788999999999975
No 35
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=2.6e-40 Score=319.78 Aligned_cols=265 Identities=13% Similarity=0.095 Sum_probs=193.9
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC-ceeEEeeccc
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK-RIAAVQSLSG 127 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g~ 127 (337)
+++.|+|+.|.+. ..+++.+.+++.+. ......+|++..|.++||+++|+|+..+.+..++++ + +++|+|+
T Consensus 29 ~~~~i~l~~~~p~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~--I~it~G~ 101 (405)
T PRK09148 29 GADIIDLGMGNPD-----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQ--VVATLGS 101 (405)
T ss_pred CCCeEEcCCCCCC-----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--EEEcCCh
Confidence 3568999998642 33456666655543 333457899999999999999999854433334554 4 5799999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
++++.+++.++.. +||+|++++|+|+.|...++..|++++.+|+..++.+ ++.+++.+.....+..++++|+|||
T Consensus 102 ~~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~---~~~l~~~~~~~~~~~~~v~l~~P~N 176 (405)
T PRK09148 102 KEGFANMAQAITA--PGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEF---FPALERAVRHSIPKPIALIVNYPSN 176 (405)
T ss_pred HHHHHHHHHHhcC--CCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCC---ccCHHHHHhhccccceEEEEeCCCC
Confidence 9999999988876 9999999999999999999999999999998433233 3444454443222345555589999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
|||.++|.+++++|+++|++++++||+||+|.+|.++. ....++..+....+++++++||||.||+||||+||+++
T Consensus 177 PtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~--~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-- 252 (405)
T PRK09148 177 PTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDG--NPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-- 252 (405)
T ss_pred CCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCC--CCCCChhhCCCccCcEEEEeccccccCCcchheeeeeC--
Confidence 99999999999999999999999999999999987532 11112222322234688899999999999999999985
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC-HHHHHHHHhh
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD-AELKKLWLKE 335 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~w~~e 335 (337)
++++++++.. +......+++.+.|.++..+|++ .++.++++++
T Consensus 253 -~~~~i~~l~~----~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~ 296 (405)
T PRK09148 253 -NERLIAALTR----VKSYLDYGAFTPIQVAATAALNGPQDCIAEMREL 296 (405)
T ss_pred -CHHHHHHHHH----HHHHhccCCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 5666555543 33322235678899999999985 3444444443
No 36
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=1.5e-40 Score=319.47 Aligned_cols=274 Identities=13% Similarity=0.117 Sum_probs=203.7
Q ss_pred cCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhC
Q 047180 29 NVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYG 108 (337)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 108 (337)
+++....+ ++.......+ .++.|+|+.|.+. ..+++.+.+++.+.......+|+|..|.++||+++++|+..
T Consensus 10 ~~~~~~~~-~~~~~~~~~~--~~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~ 81 (384)
T PRK12414 10 KLPDVGTT-IFTVIGQLAA--QHDALNLSQGAPN-----FAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTER 81 (384)
T ss_pred hcccCCcc-HHHHHHHHHH--hCCeEEcCCCCCC-----CCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHH
Confidence 44444443 3344433332 2468999999752 34567777777654112346799999999999999999855
Q ss_pred CCCccccc-CceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHH
Q 047180 109 DNSEFIKD-KRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALM 187 (337)
Q Consensus 109 ~~~~~~~~-~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~ 187 (337)
..+..+++ ++ +++|+|+++++.++++.+.. |||+|++++|+|+.|...++.+|++++.+|+. .+++.+|++.++
T Consensus 82 ~~g~~~~~~~~--i~it~g~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~ 156 (384)
T PRK12414 82 LYGARYDPASE--VTVIASASEGLYAAISALVH--PGDEVIYFEPSFDSYAPIVRLQGATPVAIKLS-PEDFRVNWDEVA 156 (384)
T ss_pred HhCCCCCCCCc--EEEECChHHHHHHHHHHhcC--CCCEEEEeCCCccchHHHHHHcCCEEEEEecC-ccccccCHHHHH
Confidence 43332333 33 57899999999998887765 99999999999999999999999999999984 335789999999
Q ss_pred HHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEe
Q 047180 188 DDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQ 267 (337)
Q Consensus 188 ~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (337)
+.+.. +.++++ +||||||||.++|++++++|+++|++++++||+||+|.+|.+++. ...++..+....+++++++
T Consensus 157 ~~l~~--~~~~v~-i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~--~~~~~~~~~~~~~~~i~~~ 231 (384)
T PRK12414 157 AAITP--RTRMII-VNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGA--RHHSMARHRELAERSVIVS 231 (384)
T ss_pred hhcCc--ccEEEE-EcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCC--CccCcccCcCccCcEEEEe
Confidence 88752 334444 589999999999999999999999999999999999999876421 1112222222235899999
Q ss_pred cccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 268 SYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 268 S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
||||.||+||+|+||+++ ++++++.+.. +......+++.+.|.++..+|+++.
T Consensus 232 SfSK~~~~pGlRiG~~v~---~~~l~~~l~~----~~~~~~~~~s~~~q~a~~~~l~~~~ 284 (384)
T PRK12414 232 SFGKSYHVTGWRVGYCLA---PAELMDEIRK----VHQFMVFSADTPMQHAFAEALAEPA 284 (384)
T ss_pred cccccccCccceEEEEec---CHHHHHHHHH----HHhheecCCCcHHHHHHHHHhcCCh
Confidence 999999999999999986 3555555443 3322233578899999999998754
No 37
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.5e-40 Score=317.87 Aligned_cols=265 Identities=14% Similarity=0.122 Sum_probs=197.0
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHH-HHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVRE-AERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~-a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
+.+.++|+.|.+. +.+++.+.+ +.+.+......+|++..|.++||+++++|+..+++..+++++ .+++|+|++
T Consensus 34 g~~~i~l~~g~p~-----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~-~i~vt~G~~ 107 (394)
T PRK05942 34 GLDLIDLGMGNPD-----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDS-EALPLLGSK 107 (394)
T ss_pred CCCeEEcCCCCCC-----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCC-eEEEccChH
Confidence 3568999998542 223343444 344443334578999999999999999998654333345543 257899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.. |||+|++++|+|+.|...++..|++++++|+..++++.+|++++++.+.. +.+++++ ||||||
T Consensus 108 ~al~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--~~k~i~l-~~P~NP 182 (394)
T PRK05942 108 EGLTHLALAYVN--PGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ--QAKILYF-NYPSNP 182 (394)
T ss_pred HHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccc--cceEEEE-cCCCCC
Confidence 999999887766 99999999999999999999999999999984444678999999888752 3344554 799999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.++|.+++++|+++|++++++||+||+|.+|.+++. ...++..+....+++++++||||.||++|+|+||+++
T Consensus 183 tG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~--- 257 (394)
T PRK05942 183 TTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGY--QPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVG--- 257 (394)
T ss_pred CCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCCChhhCCCccccEEEEecchhccCChhhheeeeec---
Confidence 99999999999999999999999999999999975321 1122322322234678899999999999999999975
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC-HHHHHHHHh
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD-AELKKLWLK 334 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~w~~ 334 (337)
++++++++.. +......+++.+.|.++..+|+. .++.++.++
T Consensus 258 ~~~l~~~l~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 300 (394)
T PRK05942 258 NRHIIQGLRT----LKTNLDYGIFSALQKAAETALQLPDSYLQQVQE 300 (394)
T ss_pred CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHH
Confidence 5666665543 22222235678899999999975 344444433
No 38
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.9e-40 Score=322.78 Aligned_cols=264 Identities=16% Similarity=0.197 Sum_probs=197.6
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-c----C-------cCCCCCCCCCCCHHHHHHHHHHHhCCCCc--ccccC
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-A----G-------TANMEYLPMGGSVKMVEETLKLAYGDNSE--FIKDK 117 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~----~-------~~~~~Y~~~~G~~~lr~aia~~~~~~~~~--~~~~~ 117 (337)
..|+|+.+++ +...+.+.+.++.. . . .....|++..|.++||+++|+|+.++.++ .++++
T Consensus 39 g~i~L~~~En------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~ 112 (468)
T PLN02450 39 GIIQMGLAEN------QLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPN 112 (468)
T ss_pred eeEEeehhHh------HhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChH
Confidence 5899999863 33446666655542 1 0 12345988899999999999999654322 25566
Q ss_pred ceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 118 RIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 118 ~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
+ +++|+|+++++.+++.++.+ |||.|++++|+|+.|...++ ..|++++++|+..++++.+|++.+++++.+.
T Consensus 113 ~--Iiit~Ga~~al~~l~~~l~~--pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~ 188 (468)
T PLN02450 113 K--LVLTAGATSANETLMFCLAE--PGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKL 188 (468)
T ss_pred H--eEEccChHHHHHHHHHHhCC--CCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhc
Confidence 6 57899999999999988877 99999999999999999888 5899999999854456888999998887642
Q ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH-HHhhh-------cCCeEEE
Q 047180 194 PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI-RIFLK-------DGHLLGL 265 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~-~~~~~-------~~~~~i~ 265 (337)
..+..++++||||||||.+++.+++++|+++|++++++||+||+|.++.+++. ...++ ..+.. ..+++++
T Consensus 189 ~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~--~~~s~l~~~~~~~~~~~~~~~~vi~ 266 (468)
T PLN02450 189 NLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSP--GFVSVMEVLKDRKLENTDVSNRVHI 266 (468)
T ss_pred CCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCC--CcccHHHHhhhcccccCCCCCcEEE
Confidence 11233444589999999999999999999999999999999999999876421 11121 21111 2468999
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
++||||.||+||+|+||+++ +++.+++.+. +.. .+++++.++|.++..+|+++++.++|.++
T Consensus 267 l~S~SK~~~l~GlRiG~li~--~~~~l~~~~~----~~~--~~~~~s~~~Q~a~~~~L~~~~~~~~~l~~ 328 (468)
T PLN02450 267 VYSLSKDLGLPGFRVGAIYS--NDEMVVSAAT----KMS--SFGLVSSQTQYLLSALLSDKKFTKNYLEE 328 (468)
T ss_pred EEeccccCCCCCccEEEEEE--CCHHHHHHHH----HHh--hcCCCCHHHHHHHHHHhCCchhHHHHHHH
Confidence 99999999999999999986 4554444332 221 23456889999999999997665555543
No 39
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=5.6e-40 Score=314.33 Aligned_cols=273 Identities=12% Similarity=0.058 Sum_probs=198.9
Q ss_pred hHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCce
Q 047180 40 GVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRI 119 (337)
Q Consensus 40 ~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i 119 (337)
.+..+++...+.++++|+.|.+. ..+++.+.+++.+.. .....|++..|.++||+++++|+..+++..+++++
T Consensus 13 ~~~~~~~~~~~~~~i~l~~~~p~-----~~~~~~~~~a~~~~~-~~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~- 85 (374)
T PRK05839 13 ELLKEITPNKEYKGLDLTIGEPQ-----FETPKFIQDALKNNA-HLLNKYPKSAGEESLREAQRGFFKRRFKIELKENE- 85 (374)
T ss_pred HHHHHhhhcCCCCeEEcCCCCCC-----CCCCHHHHHHHHHHh-hccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcce-
Confidence 33333333323479999999753 234567777766532 23568999999999999999999665444466666
Q ss_pred eEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 120 AAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 120 ~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
+++|+|+++++.+++.++..-.+||.|++++|+|+.|...++..|++++++++..++++.+|++..+ +. ..+++
T Consensus 86 -I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~~---~~k~v 159 (374)
T PRK05839 86 -LIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--LQ---EVDLV 159 (374)
T ss_pred -EEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--hc---cccEE
Confidence 5799999999988876653112689999999999999999999999999999843445666654432 22 23455
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh-----hcCCeEEEEeccccccc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL-----KDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~S~SK~~~ 274 (337)
++ ||||||||.+++.+++++|+++|+++|++||+||+|.+|.++. ...++.... ...+++|+++||||.|+
T Consensus 160 ~i-~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~---~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~ 235 (374)
T PRK05839 160 IL-NSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT---PPPSLLEASILVGNESFKNVLVINSISKRSS 235 (374)
T ss_pred EE-eCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC---CCCCHhhhhcccCccccCcEEEEeccccccC
Confidence 55 7999999999999999999999999999999999999986431 111211111 12368999999999999
Q ss_pred ccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhhh
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKEV 336 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~el 336 (337)
+||+|+||+++ ++++++++.. .......+.+.+.|.++..+|.++++.+++++++
T Consensus 236 ~~GlRiG~ii~---~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 290 (374)
T PRK05839 236 APGLRSGFIAG---DASILKKYKA----YRTYLGCASPLPLQKAAAVAWLDDEHAEFFRNIY 290 (374)
T ss_pred CccceeEEEec---CHHHHHHHHH----HHhhcCCCCChHHHHHHHHHhccchHHHHHHHHH
Confidence 99999999985 4666665543 2222223567889999998888766666666554
No 40
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=6.4e-40 Score=315.24 Aligned_cols=286 Identities=15% Similarity=0.057 Sum_probs=203.4
Q ss_pred ccccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHH
Q 047180 22 WMSSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVE 100 (337)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~ 100 (337)
+||+ ..+...+...+..+.... . .+.+++|+.|.+. +..++.+.++..+ +.. ...+|++..|.++||+
T Consensus 2 ~~~~--~~~~~~~~~~~~~~~~~~-~--~~~~i~l~~g~p~-----~~~p~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~ 70 (387)
T PRK08912 2 KMGN--PVFADLPTTIFEVMSQLA-R--EHGAINLGQGFPD-----DPGPEDVRRAAADALLD-GSNQYPPMMGLPELRQ 70 (387)
T ss_pred chhh--HHHhhCCCCHHHHHHHHH-h--hCCeEEccCCCCC-----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHH
Confidence 4543 344444444443333322 2 2468999999763 2223445444433 322 3467999999999999
Q ss_pred HHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCC
Q 047180 101 ETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKG 180 (337)
Q Consensus 101 aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~ 180 (337)
++++|+.+.++...+++ .++++|+|+++++.+++..+.. |||+|++++|+|+.|..+++..|++++.+++. +++++
T Consensus 71 ~ia~~~~~~~g~~~~~~-~~i~~t~G~~~al~~~~~~~~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~ 146 (387)
T PRK08912 71 AVAAHYARFQGLDLDPE-TEVMVTSGATEALAAALLALVE--PGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLE-PPHWR 146 (387)
T ss_pred HHHHHHHHHhCCCCCCc-ccEEEeCCcHHHHHHHHHHhcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccCc
Confidence 99999865433334554 1357999999999988877765 89999999999999999999999999999983 34688
Q ss_pred CChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcC
Q 047180 181 LDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDG 260 (337)
Q Consensus 181 ~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 260 (337)
+|++.+++.+.. +.+++++ ++||||||.+++.+++++|+++|++++++||+||+|.++.+++ ....++..+....
T Consensus 147 ~~~~~l~~~~~~--~~~~v~l-~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~ 221 (387)
T PRK08912 147 LPRAALAAAFSP--RTKAVLL-NNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDG--RRHIPLMTLPGMR 221 (387)
T ss_pred CCHHHHHHHhCc--cceEEEE-eCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCC--CCCcChhhCCCcc
Confidence 999999988753 3345554 7999999999999999999999999999999999999987642 1112222222223
Q ss_pred CeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC-CHHHHHHHHh
Q 047180 261 HLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG-DAELKKLWLK 334 (337)
Q Consensus 261 ~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~-~~~~~~~w~~ 334 (337)
+++++++||||.||++|+|+||+++ ++++++.+.. .......+.+...|.++..+|. ++++.++.++
T Consensus 222 ~~~i~~~S~SK~~g~~GlRiG~~~~---~~~~~~~l~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 289 (387)
T PRK08912 222 ERTVKIGSAGKIFSLTGWKVGFVCA---APPLLRVLAK----AHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRA 289 (387)
T ss_pred CceEEEeechhhccCcCceeEEEec---CHHHHHHHHH----HHhhccccCChHHHHHHHHHHhCCHHHHHHHHH
Confidence 5899999999999999999999986 4666555543 2222222345667888877775 3444444433
No 41
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=9.1e-40 Score=316.43 Aligned_cols=252 Identities=17% Similarity=0.133 Sum_probs=185.7
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cC----cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEee
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AG----TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQS 124 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 124 (337)
.++.++|+.|.+. ..+++.+.+++.+. .. ....+|+|..|.++||+++|+|+.+.++..+++++ +++|
T Consensus 33 ~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~--I~it 105 (409)
T PRK07590 33 EAKIIRLGIGDVT-----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADE--IFIS 105 (409)
T ss_pred CCceEEecCcCCC-----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhh--EEEC
Confidence 4578999999653 33456666665543 21 24568999999999999999998766555566776 5799
Q ss_pred ccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCce-----------eeEeeeccCCCCCCChHHHHHHHHcC
Q 047180 125 LSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVT-----------QRTFHYYHPGTKGLDFAALMDDIKNA 193 (337)
Q Consensus 125 ~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~-----------~~~~~~~~~~~~~~d~~~l~~~l~~~ 193 (337)
+|+++++.++..++ . |||+|++++|+|+.|..+++..|++ ++++|+..++++.+|++.
T Consensus 106 ~Ga~~al~~l~~~~-~--~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~-------- 174 (409)
T PRK07590 106 DGAKCDTGNILDIF-G--PDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE-------- 174 (409)
T ss_pred CCHHHHHHHHHHhc-C--CCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc--------
Confidence 99999999865543 3 8999999999999999999999997 889988433334444321
Q ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc
Q 047180 194 PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM 273 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 273 (337)
++.+++++ ||||||||.++|.+++++|+++|++++++||+||+|.+|.++. ....++..+....+++|+++||||+|
T Consensus 175 ~~~k~i~l-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~--~~~~~~~~~~~~~~~vi~~~SfSK~~ 251 (409)
T PRK07590 175 EKVDIIYL-CFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDP--SLPHSIYEIEGARECAIEFRSFSKTA 251 (409)
T ss_pred cCceEEEE-eCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCC--CCCcchhhCCCcccceEEEecCcccc
Confidence 23345555 7999999999999999999999999999999999999997532 11122333322234799999999999
Q ss_pred cccccccceeEeeeCCHHHHHHH--------HHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 274 GLYGQRVGCLSVLCEDEKQAVAV--------KSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 274 ~~~G~RvG~~~~~~~~~~~~~~~--------~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|+||+|+||+++ ++++++++ ...........+.+++.+.|.++..+|++
T Consensus 252 ~~pGlRiG~~i~---~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~ 308 (409)
T PRK07590 252 GFTGTRCAYTVV---PKELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSP 308 (409)
T ss_pred CCcCceeEEEEc---CHHHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcC
Confidence 999999999986 34555421 11111122233456788999999999975
No 42
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=8.1e-40 Score=313.55 Aligned_cols=255 Identities=15% Similarity=0.119 Sum_probs=196.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
++.|+|+.|.+. ..+++.+.+++.+.......+|++..|.++||+++++|+.++++..+++++ ++++|+|++++
T Consensus 20 ~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~-~i~~t~G~~~a 93 (378)
T PRK07682 20 EGVISLGVGEPD-----FVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPND-EIIVTVGASQA 93 (378)
T ss_pred CCeEEeCCCCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC-cEEEeCChHHH
Confidence 468999999753 223445666655431223567998899999999999999654333344432 25789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+.+ |||+|++++|+|+.|...++..|++++.+++..++++++|++.+++.+.. +.++++ +|+||||||
T Consensus 94 l~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~~~v~-~~~p~NPtG 168 (378)
T PRK07682 94 LDVAMRAIIN--PGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITA--KTKAIL-LCSPNNPTG 168 (378)
T ss_pred HHHHHHHhCC--CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCc--ccEEEE-EECCCCCcC
Confidence 9999887766 99999999999999999999999999999874334689999999988753 334444 488999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.++|.+++++|+++|++++++||+||+|.+|.++. ...++..+....+++++++||||.||+||+|+||+++ ++
T Consensus 169 ~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~---~~ 242 (378)
T PRK07682 169 AVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDE---AYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAA---PV 242 (378)
T ss_pred cCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCC---CCCChhhcccccCCEEEEecCcccccChhhhhhhhhc---CH
Confidence 99999999999999999999999999999998642 1112333333346899999999999999999999985 56
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++++++... ......+++.++|.++..+|++.
T Consensus 243 ~~i~~l~~~----~~~~~~~~~~~~q~a~~~~l~~~ 274 (378)
T PRK07682 243 YFSEAMLKI----HQYSMMCAPTMAQFAALEALRAG 274 (378)
T ss_pred HHHHHHHHH----HHhhccCCCHHHHHHHHHHHhCC
Confidence 666665542 22334467889999999999863
No 43
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.2e-39 Score=319.63 Aligned_cols=285 Identities=17% Similarity=0.199 Sum_probs=205.3
Q ss_pred CCCCCCchhhHHHHHhcC-----CCC-CeeEeeeeeeecCCCCcccchHHHHHHHH-----h-------cCcCCCCCCCC
Q 047180 31 EPAAKDPILGVTEAFLAD-----PSP-DKVNVGVGAYRDDNGKPVVLECVREAERR-----I-------AGTANMEYLPM 92 (337)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~-----~~~-~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-----~-------~~~~~~~Y~~~ 92 (337)
.....++.+..-+.+..+ .++ .+|+|+..+ ++...+.+.+.+++ + .-.....|.+.
T Consensus 20 ~~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aE------N~l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 93 (496)
T PLN02376 20 QHGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAE------NQLCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDY 93 (496)
T ss_pred ccCCCCchHHHHHHHhCCCCCcccCCCceEEeecch------hhhhHHHHHHHHHhCchhhccccccccccchhhccCCC
Confidence 334445555555555543 234 589999864 34333333332221 1 01223468889
Q ss_pred CCCHHHHHHHHHHHhCCCC--cccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCceee
Q 047180 93 GGSVKMVEETLKLAYGDNS--EFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHVTQR 169 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~--~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~~~~ 169 (337)
.|.++||+++|+|+.+..+ ..+++++ +++|+|+++++.+++.++.+ |||.|++++|+|+.|...++ ..|++++
T Consensus 94 ~G~~~LR~aiA~~l~~~~g~~v~v~pe~--Ivit~Ga~~al~~l~~~l~~--pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv 169 (496)
T PLN02376 94 HGLKKFRQAIAHFMGKARGGKVTFDPER--VVMSGGATGANETIMFCLAD--PGDVFLIPSPYYAAFDRDLRWRTGVEII 169 (496)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCcCChhh--EEEccchHHHHHHHHHHhCC--CCCEEEECCCCccchHHHHHhhCCCEEE
Confidence 9999999999999965433 2366676 57999999999999998877 99999999999999999888 5899999
Q ss_pred EeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCC
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDP 246 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~ 246 (337)
++|+...+++++|++.+++++... ..+..++++||||||||.+++++++++|+++|++++++||+||+|.++.+++.
T Consensus 170 ~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~ 249 (496)
T PLN02376 170 PVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGG 249 (496)
T ss_pred EEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC
Confidence 999854456899999998765321 12334444589999999999999999999999999999999999999876421
Q ss_pred ccchHHHHHhhhc-------CCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHH
Q 047180 247 ERDAKAIRIFLKD-------GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIV 319 (337)
Q Consensus 247 ~~~~~~~~~~~~~-------~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~ 319 (337)
...++..+... .+++++++||||.||+||+|+||++. +++.+.+.+. .+. .+..++.+.|.++
T Consensus 250 --~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~--~~~~l~~~~~----~~~--~~~~vs~~~Q~a~ 319 (496)
T PLN02376 250 --DFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYS--FNDSVVSCAR----KMS--SFGLVSSQTQLML 319 (496)
T ss_pred --CcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEE--CCHHHHHHHH----HHh--hcCCCCHHHHHHH
Confidence 22233333221 13577899999999999999999986 4555544332 221 2335788999999
Q ss_pred HHHhCCHHHHHHHHhh
Q 047180 320 STILGDAELKKLWLKE 335 (337)
Q Consensus 320 ~~~l~~~~~~~~w~~e 335 (337)
+.+|+++++.++++++
T Consensus 320 ~~~L~d~~~~~~~l~~ 335 (496)
T PLN02376 320 ASMLSDDQFVDNFLME 335 (496)
T ss_pred HHHhCChhHHHHHHHH
Confidence 9999998776666443
No 44
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=2.7e-39 Score=315.56 Aligned_cols=267 Identities=15% Similarity=0.199 Sum_probs=200.5
Q ss_pred CCC-CeeEeeeeeeecCCCCcccchHHHHHHHHh-c-----------CcCCCCCCCCCCCHHHHHHHHHHHhCCCC--cc
Q 047180 49 PSP-DKVNVGVGAYRDDNGKPVVLECVREAERRI-A-----------GTANMEYLPMGGSVKMVEETLKLAYGDNS--EF 113 (337)
Q Consensus 49 ~~~-~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~-----------~~~~~~Y~~~~G~~~lr~aia~~~~~~~~--~~ 113 (337)
.+| ..|+|+..+. ....+.+.+-+++. . ......|.+..|.++||+++|+|+.++.+ ..
T Consensus 44 ~np~g~i~l~~aeN------~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~ 117 (447)
T PLN02607 44 HNPSGVIQMGLAEN------QVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKAR 117 (447)
T ss_pred cCCCceEEEechhh------hhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCC
Confidence 344 4899999752 33445555444331 1 01234588889999999999999965433 23
Q ss_pred cccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCceeeEeeeccCCCCCCChHHHHHHHHc
Q 047180 114 IKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHVTQRTFHYYHPGTKGLDFAALMDDIKN 192 (337)
Q Consensus 114 ~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~ 192 (337)
+++++ +++|+|+++++.+++.++.+ |||.|++++|+|+.|...+. ..|++++++++...++|.+|++++++++..
T Consensus 118 v~p~~--Ivit~G~t~al~~l~~~l~~--pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~ 193 (447)
T PLN02607 118 FDPDR--IVLTAGATAANELLTFILAD--PGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQE 193 (447)
T ss_pred cCHHH--eEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHH
Confidence 66776 47899999999999888876 99999999999999998887 589999999985445678999999998864
Q ss_pred C---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh------cCCeE
Q 047180 193 A---PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK------DGHLL 263 (337)
Q Consensus 193 ~---~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~------~~~~~ 263 (337)
. ..+..++++||||||||.++|++++++|+++|++|+++||+||+|.++.+++ .+..++..+.. ..+++
T Consensus 194 a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~--~~f~S~~s~~~~~~~~~~~~~v 271 (447)
T PLN02607 194 AEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSA--SEFVSVAEIVEARGYKGVAERV 271 (447)
T ss_pred HHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCC--CCcccHHHHHhhcCCCCCcCcE
Confidence 2 1233444558999999999999999999999999999999999999987642 11223332221 13589
Q ss_pred EEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 264 GLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 264 i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
++++||||.||++|+|+||++. .++.+++.+. .+ ..++++|.++|.+++.+|+++++.++|.++
T Consensus 272 ~vi~s~SK~fg~~GlRvG~ivs--~n~~l~~~~~----~~--~~~~~~s~~~q~~~~~~L~d~~~~~~~l~~ 335 (447)
T PLN02607 272 HIVYSLSKDLGLPGFRVGTIYS--YNDKVVTTAR----RM--SSFTLVSSQTQHLLASMLSDEEFTENYIRT 335 (447)
T ss_pred EEEEcchhcCCCCcceEEEEEE--cCHHHHHHHH----HH--hhcCCCCHHHHHHHHHHhCCchhHHHHHHH
Confidence 9999999999999999999986 4666544433 22 234457888999999999998877777654
No 45
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=1.6e-39 Score=312.56 Aligned_cols=253 Identities=18% Similarity=0.176 Sum_probs=196.7
Q ss_pred CCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 49 PSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 49 ~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
..++.++|+.|.+. ..+++.+.+++.+........|++..|.++||+++|+|+..+++..+++++ +++|+|++
T Consensus 28 ~~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~--i~~t~G~~ 100 (388)
T PRK07337 28 AGRDIIHMGIGEPD-----FTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAPER--IVVTAGAS 100 (388)
T ss_pred cCCCEEEeCCcCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHh--EEEecCcH
Confidence 34678999999652 334566777766532223467999999999999999998655444455665 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++.++.. +||+|++++|+|+.|...++..|++++.+|+..++++++|++++++.+.. +.+.++ +|+||||
T Consensus 101 ~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~-l~~p~NP 175 (388)
T PRK07337 101 AALLLACLALVE--RGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGE--RTRGVL-LASPSNP 175 (388)
T ss_pred HHHHHHHHHhcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCc--cceEEE-EECCCCC
Confidence 999999887765 99999999999999999999999999999984444689999999987752 334444 4899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|++++++||+||+|.++.+++ ...+ +....+++++++||||.||++|+|+||+++
T Consensus 176 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~---~~~~~~~vi~~~S~SK~~~~~G~RiG~~~~--- 246 (388)
T PRK07337 176 TGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDA---APVS---ALSLGDDVITINSFSKYFNMTGWRLGWLVV--- 246 (388)
T ss_pred CCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCC---CCcC---hhhccCCEEEEEechhhcCCchhheeeeec---
Confidence 9999999999999999999999999999999987532 1111 112346899999999999999999999986
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++++++++.. .......+++.++|.++..++.++
T Consensus 247 ~~~l~~~l~~----~~~~~~~~~s~~~q~~~~~~l~~~ 280 (388)
T PRK07337 247 PEALVGTFEK----LAQNLFICASALAQHAALACFEPD 280 (388)
T ss_pred CHHHHHHHHH----HHHHhccCCChHHHHHHHHHhccC
Confidence 3455554443 333334467889999999999753
No 46
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=3.3e-39 Score=310.40 Aligned_cols=253 Identities=15% Similarity=0.167 Sum_probs=196.2
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC-ceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK-RIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g~~~ 129 (337)
++.++|+.|.+. .++++.+.+++.+.......+|++..|.++||+++++|+..+++..++++ + +++|+|+++
T Consensus 28 ~~~i~l~~~~p~-----~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~--I~~t~G~~~ 100 (387)
T PRK07683 28 DNLISLTIGQPD-----FPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPESE--IIVTIGASE 100 (387)
T ss_pred CCeEEecCCCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--EEEeCChHH
Confidence 568999999642 33456677777664222346899899999999999999865433334454 4 579999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++..+.. +||+|++++|+|+.|...++..|++++.++. +++++.+|.+.+++.+.. +.+++ ++++|||||
T Consensus 101 al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~--~~~~i-~i~~p~NPt 174 (387)
T PRK07683 101 AIDIAFRTILE--PGTEVILPAPIYPGYEPIIRLCGAKPVFIDT-RSTGFRLTAEALENAITE--KTRCV-VLPYPSNPT 174 (387)
T ss_pred HHHHHHHHhCC--CCCEEEEcCCCccchHHHHHHcCCEEEEeec-CcccCCCCHHHHHHhcCc--CceEE-EEeCCCCCC
Confidence 99999887765 8999999999999999999999999999987 344677788899887753 33444 458999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|+++|++++++||+||+|.++.+++ ...++..+.+..+++++++||||.||+||+|+||+++ +
T Consensus 175 G~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~---~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~---~ 248 (387)
T PRK07683 175 GVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQ---PHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFA---P 248 (387)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCC---CcCChhhccCCcCCeEEEeeccccccCccceeEEEEc---C
Confidence 999999999999999999999999999999997542 1222333322345899999999999999999999986 4
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
+++++++... ......+++.++|.++..+|.++
T Consensus 249 ~~l~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~ 281 (387)
T PRK07683 249 SYLAKHILKV----HQYNVTCASSISQYAALEALTAG 281 (387)
T ss_pred HHHHHHHHHH----HHhccCCCChHHHHHHHHHHhCC
Confidence 5566655542 22233456788999999999764
No 47
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.2e-39 Score=307.83 Aligned_cols=262 Identities=18% Similarity=0.163 Sum_probs=201.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccc-cCceeEEeeccch
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIK-DKRIAAVQSLSGT 128 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~-~~~i~~~~t~g~~ 128 (337)
+++++|+.|.+. ..+++.+.+|+.+. .......|.+..|.+++|+++++++....+...+ +++ +++|.|++
T Consensus 27 ~~~~~l~~g~~~-----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~--i~~t~G~~ 99 (389)
T PRK05957 27 PGTISLGQGVVS-----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQA--IVVTAGSN 99 (389)
T ss_pred CCeEEccCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCe--EEEeCChH
Confidence 468999999753 33566677777654 3333467999999999999999998554332233 333 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++..++..+.. |||+|++++|+|+.|...++..|++++.+|. + +++++|++++++.+.. +.++++ +++||||
T Consensus 100 ~~l~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~--~~klv~-~~~p~NP 172 (389)
T PRK05957 100 MAFMNAILAITD--PGDEIILNTPYYFNHEMAITMAGCQPILVPT-D-DNYQLQPEAIEQAITP--KTRAIV-TISPNNP 172 (389)
T ss_pred HHHHHHHHHhcC--CCCEEEEeCCCCcCHHHHHHhcCCEEEEeec-C-CCCCcCHHHHHHhcCc--CceEEE-EeCCCCC
Confidence 999888877655 8999999999999999999999999999987 3 3578999999998752 334444 5889999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|+++|++||+||+|.+|.++.. ...+...+.....++|+++||||.||++|+|+||+++
T Consensus 173 tG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~--- 247 (389)
T PRK05957 173 TGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGV--KHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVI--- 247 (389)
T ss_pred CCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCC--CccChhhCCCccCcEEEEecchhhccCccceeEEEec---
Confidence 99999999999999999999999999999999986421 1112222323346899999999999999999999986
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC-HHHHHHHHhh
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD-AELKKLWLKE 335 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~w~~e 335 (337)
++++++++.. .......+++.+.|.++..+|++ .++.++++++
T Consensus 248 ~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 291 (389)
T PRK05957 248 PIHLLEAIKK----IQDTILICPPVVSQYAALGALQVGKSYCQQHLPE 291 (389)
T ss_pred CHHHHHHHHH----HHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHH
Confidence 4566555543 33333456788999999999986 4566666654
No 48
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=1.1e-38 Score=307.75 Aligned_cols=271 Identities=16% Similarity=0.117 Sum_probs=203.8
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
+.++|+|+.|.|... ...+++.+.+++.+........|++..|.++||+++++|+...++..+++++ +++|+|+++
T Consensus 29 ~~~~i~l~~g~p~~~--~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~--i~it~G~~~ 104 (398)
T PRK08363 29 GIKVIRLNIGDPVKF--DFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITPDD--VRVTAAVTE 104 (398)
T ss_pred CCCeEEEeCCCCCcC--CCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhh--EEEeCCHHH
Confidence 357999999976311 1345677777776542222357988899999999999998655444466665 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++.++.. +||+|++++|+|+.|...++..|++++.++..+++++.+|++.+++.+.. +.+++++ +||||||
T Consensus 105 al~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~--~~~~v~l-~~p~NPt 179 (398)
T PRK08363 105 ALQLIFGALLD--PGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE--KTKAIAV-INPNNPT 179 (398)
T ss_pred HHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCc--ceEEEEE-ECCCCCC
Confidence 99999887766 99999999999999999999999999888433444677899999887752 3344444 7999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|+++|++++++||+||+|.++.++. ...++..+. ...++++++||||.|++||+|+||+++. .+
T Consensus 180 G~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~---~~~~~~~~~-~~~~vi~~~SfSK~~~~~GlRiG~~~~~-~~ 254 (398)
T PRK08363 180 GALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEG---KHVSPGSLT-KDVPVIVMNGLSKVYFATGWRLGYIYFV-DP 254 (398)
T ss_pred CcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCC---cccCHHHcC-cCCcEEEEecchhccCCccceEEEEEEe-Cc
Confidence 999999999999999999999999999999987531 112222232 2347999999999999999999999862 24
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC-HHHHHHHHhh
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD-AELKKLWLKE 335 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~w~~e 335 (337)
++.++.+...+..+....+ +++.++|.++..+|.+ .++.++++++
T Consensus 255 ~~~~~~l~~~~~~~~~~~~-~~s~~~q~~~~~~l~~~~~~l~~~~~~ 300 (398)
T PRK08363 255 EGKLAEVREAIDKLARIRL-CPNTPAQFAAIAGLTGPMDYLEEYMKK 300 (398)
T ss_pred HHHHHHHHHHHHHHhcccc-cCChHHHHHHHHHHhCChHHHHHHHHH
Confidence 5566666665554332233 5788999999999975 3444444443
No 49
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=4.8e-39 Score=309.13 Aligned_cols=262 Identities=13% Similarity=0.072 Sum_probs=198.7
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.++|+|+.|.+. ..+++.+.+++++.......+|.+..|.++||+++++++.+..+...+++. .+++|.|++++
T Consensus 30 ~~~i~l~~g~~~-----~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~-~i~~t~G~~~a 103 (386)
T PRK09082 30 HGAINLSQGFPD-----FDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDADS-EITVTAGATEA 103 (386)
T ss_pred CCEEEecCCCCC-----CCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCC-cEEEeCCHHHH
Confidence 468999999653 233566777766542223467999999999999999998554333333331 25789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+.. |||+|++++|+|+.|...++..|++++.+++. .+++.+|++.+++.+.. +.++++ +++||||||
T Consensus 104 l~~~~~~~~~--~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~--~~~~v~-l~~p~NPtG 177 (386)
T PRK09082 104 LFAAILALVR--PGDEVIVFDPSYDSYAPAIELAGGRAVRVALQ-PPDFRVDWQRFAAAISP--RTRLII-LNTPHNPSG 177 (386)
T ss_pred HHHHHHHHcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-cccccCCHHHHHHhcCc--cceEEE-EeCCCCCCC
Confidence 9998877765 99999999999999999999999999999984 34688999999988753 334554 479999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|+++|++|+++||+||+|.++.+++ ....++..+....+++++++||||.||++|+|+||+++ ++
T Consensus 178 ~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~--~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~---~~ 252 (386)
T PRK09082 178 TVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDG--AGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVA---PA 252 (386)
T ss_pred cCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCC--CCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhC---CH
Confidence 99999999999999999999999999999988642 11122333333346899999999999999999999986 46
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC-CHHHHHHHH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG-DAELKKLWL 333 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~-~~~~~~~w~ 333 (337)
++++.+.. .......+++.+.|.+++.+|+ ++++.++.+
T Consensus 253 ~l~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 292 (386)
T PRK09082 253 ALSAEFRK----VHQYNTFTVNTPAQLALADYLRAEPEHYLELP 292 (386)
T ss_pred HHHHHHHH----HHhhhcCCCChHHHHHHHHHHhCChHHHHHHH
Confidence 66555544 2222333578999999999997 554444433
No 50
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.8e-38 Score=305.72 Aligned_cols=274 Identities=14% Similarity=0.144 Sum_probs=203.5
Q ss_pred CCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCC
Q 047180 30 VEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGD 109 (337)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~ 109 (337)
+.....+.+..+.+.... .++.|+|+.|.+. ..+++.+.++..+.-......|.|..|.++||+++++|+...
T Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~ 83 (391)
T PRK07309 11 LDKIEVSLIRQFDQSISD--IPGILKLTLGEPD-----FTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEK 83 (391)
T ss_pred hhhcCccHHHHHHHHHHh--cCCeEEcCCCCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHH
Confidence 334333444444433322 2568999999753 344566777766531222356999999999999999998654
Q ss_pred CCccccc-CceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHH
Q 047180 110 NSEFIKD-KRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMD 188 (337)
Q Consensus 110 ~~~~~~~-~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~ 188 (337)
++..+++ ++ +++|+|+++++.+++..+.. +||+|++++|+|+.|..+++..|.+++.++. ++.++.+|++.+++
T Consensus 84 ~~~~~~~~~~--i~it~G~~~al~~~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~ 158 (391)
T PRK07309 84 YNLDYAPENE--ILVTIGATEALSASLTAILE--PGDKVLLPAPAYPGYEPIVNLVGAEIVEIDT-TENDFVLTPEMLEK 158 (391)
T ss_pred hCCCCCCCCc--EEEeCChHHHHHHHHHHhcC--CCCEEEEeCCCCcchHHHHHHcCCEEEEEec-CCcCCcCCHHHHHH
Confidence 4333332 34 57999999999999887765 8999999999999999999999999999987 34457899999999
Q ss_pred HHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEec
Q 047180 189 DIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 189 ~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
++...+++..++++++||||||.+++.+++++|+++|++|+++||+||+|.+|.+++ ....++..+ ..+++++++|
T Consensus 159 ~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~--~~~~~~~~~--~~~~~i~~~S 234 (391)
T PRK07309 159 AILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTG--EPHVSIAEY--LPDQTILING 234 (391)
T ss_pred HhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCC--CCCCCHHHh--ccCCEEEEec
Confidence 886433233444447899999999999999999999999999999999999998631 111222222 2368999999
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
|||.||+||+|+||+++ ++++++++... ......+++.++|.++..+|++.
T Consensus 235 ~SK~~g~~GlRvG~~v~---~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~ 285 (391)
T PRK07309 235 LSKSHAMTGWRIGLIFA---PAEFTAQLIKS----HQYLVTAATTMAQFAAVEALTNG 285 (391)
T ss_pred ChhhccCccceeEEEEe---CHHHHHHHHHH----HhhcccCCChHHHHHHHHHHhCC
Confidence 99999999999999986 46666665532 22233467888999999999874
No 51
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-38 Score=288.49 Aligned_cols=279 Identities=16% Similarity=0.120 Sum_probs=216.1
Q ss_pred CchhhHHHHHhcCC--C--CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCC
Q 047180 36 DPILGVTEAFLADP--S--PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDN 110 (337)
Q Consensus 36 ~~~~~~~~~~~~~~--~--~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~ 110 (337)
..+..+...+.... + ..+|.|+.|.|.- -++..+.+...+|+.. +..+..++|+|+.|....|+|+|+|+.+.-
T Consensus 42 ~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv-~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l 120 (447)
T KOG0259|consen 42 VTIRGILSALFDCCDPEKKKPILPLGHGDPSV-YPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDL 120 (447)
T ss_pred ccHHHHHHHHhhcCCcccCceeccCCCCCCCc-cccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCC
Confidence 34555554443322 2 3689999997642 2345555555555544 455667899999999999999999986654
Q ss_pred CcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHH
Q 047180 111 SEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDI 190 (337)
Q Consensus 111 ~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l 190 (337)
...+++++ +++|.|+++|+.+++..|++ ||..|++|.|+||.|...++..|.++.+|.+..+++|.+|++.+++..
T Consensus 121 ~~kl~a~D--V~ltsGC~qAIe~~i~~LA~--p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~ 196 (447)
T KOG0259|consen 121 PNKLTADD--VVLTSGCSQAIELAISSLAN--PGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALA 196 (447)
T ss_pred CCccCcCc--eEEeccchHHHHHHHHHhcC--CCCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhh
Confidence 34567776 57999999999999999997 999999999999999999999999999999988889999999999876
Q ss_pred HcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccc
Q 047180 191 KNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYA 270 (337)
Q Consensus 191 ~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 270 (337)
.+ ++.++++ +|||||+|.++|++.+++|+++|+++++.||+||+|.+++|++ ....++..|.+. ..++.++|.|
T Consensus 197 DE--NT~Aivv-iNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~--~pfvpmg~fssi-VPVitlggis 270 (447)
T KOG0259|consen 197 DE--NTVAIVV-INPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGD--KPFVPMGKFSSI-VPVITLGGIS 270 (447)
T ss_pred cc--CeeEEEE-eCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCC--CCccchhhcccc-CceEeecccc
Confidence 53 3445555 6899999999999999999999999999999999999999874 233444445433 4699999999
Q ss_pred ccccccccccceeEeeeCC-----HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC--HHHHH
Q 047180 271 KNMGLYGQRVGCLSVLCED-----EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD--AELKK 330 (337)
Q Consensus 271 K~~~~~G~RvG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~ 330 (337)
|.|-.||||+||++...++ ...++.+++.+. ...+|+++.|.|.-.+|+. ++|.+
T Consensus 271 KrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~-----~~~~p~TiiQ~AlP~IL~kTp~efF~ 332 (447)
T KOG0259|consen 271 KRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLD-----IIPGPATIIQGALPDILEKTPEEFFD 332 (447)
T ss_pred cccccCCceeeeEEEecccccccchHHHHHHHHHHh-----ccCCccHhHHHHhHHHHHhChHHHHH
Confidence 9999999999999974332 222333433222 3457999999999999984 34443
No 52
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-38 Score=305.03 Aligned_cols=268 Identities=17% Similarity=0.103 Sum_probs=201.9
Q ss_pred chhhHHHHHhc--CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcc
Q 047180 37 PILGVTEAFLA--DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEF 113 (337)
Q Consensus 37 ~~~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~ 113 (337)
.+..+.+.+.+ +.....++|+.|.+. ..+++.+.+++.+. .......|.+..|.++||+++++++.+.++..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~ 87 (386)
T PRK07550 13 PIPEVRAWLAGYDGADGPLIDLSQAVPG-----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAA 87 (386)
T ss_pred HHHHHHHHHHHHhhcCCCeEEeCCCCCC-----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCC
Confidence 44444443332 234568999999753 23456677776654 33345679999999999999999986554444
Q ss_pred cccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC
Q 047180 114 IKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA 193 (337)
Q Consensus 114 ~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 193 (337)
+++++ +++|+|+++++.+++.++.. |||+|++++|+|+.|..+++..|++++.+++.+++++.+|++.+++.+..
T Consensus 88 ~~~~~--i~~t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~~~~- 162 (386)
T PRK07550 88 ISPEQ--VHITSGCNQAFWAAMVTLAG--AGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEALITP- 162 (386)
T ss_pred CCcce--EEEecCcHHHHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHHhcc-
Confidence 55665 57899999999999888766 99999999999999999999999999999985344677899999988863
Q ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc
Q 047180 194 PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM 273 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 273 (337)
..+++++ ++||||||.+++.+++++|+++|++++++||+||+|.+|.++.. ...+.........+++++.||||.|
T Consensus 163 -~~~~v~~-~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~ 238 (386)
T PRK07550 163 -RTRAIAL-VTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGG--APHDLFADPDWDDTLVHLYSFSKSY 238 (386)
T ss_pred -cCcEEEE-eCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCC--CCcchhhCCCccccEEEEecchhhc
Confidence 3345554 67999999999999999999999999999999999999865311 1111111112245899999999999
Q ss_pred cccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 274 GLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 274 ~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|++|+|+||+++ +++.++++.. .......+++.++|.++..+|++
T Consensus 239 g~~G~RiG~i~~---~~~~~~~~~~----~~~~~~~~~s~~~q~~~~~~l~~ 283 (386)
T PRK07550 239 ALTGHRVGAVVA---SPARIAEIEK----FMDTVAICAPRIGQIAVAWGLPN 283 (386)
T ss_pred cCcccceEeeec---CHHHHHHHHH----HHhhcccCCCcHHHHHHHHHhcc
Confidence 999999999986 3555555443 33334456789999999999986
No 53
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=3.7e-39 Score=314.25 Aligned_cols=246 Identities=14% Similarity=0.103 Sum_probs=191.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
...++|+.|.+. +.++|.+.+++.+... ....|++..|.++||+++++|+..... .+++ +++|+|++++
T Consensus 85 ~~~i~L~~g~p~-----~~~~p~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~--Iiit~G~~~a 153 (431)
T PRK15481 85 TPLHDLAGGNPD-----PQRLPDLSRYFARLSR-TPRLYGDAPVSPELHAWAARWLRDDCP---VAFE--IDLTSGAIDA 153 (431)
T ss_pred chhhhhhcCCCC-----hhHhHHHHHHHHHhhh-hhhhcCCcCCCHHHHHHHHHHHhhccC---CcCe--EEEecCcHHH
Confidence 356889988542 3344556666655422 235799999999999999999743321 1233 6899999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.++++++.+ |||+|++++|+|+.|...++..|++++++|+ ++ .++|++.+++++.. ..++++++||||||||
T Consensus 154 l~~~~~~l~~--pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~-~~--~g~~~~~l~~~~~~--~~k~i~~~p~p~NPTG 226 (431)
T PRK15481 154 IERLLCAHLL--PGDSVAVEDPCFLSSINMLRYAGFSASPVSV-DA--EGMQPEKLERALAQ--GARAVILTPRAHNPTG 226 (431)
T ss_pred HHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcCCeEEeecc-CC--CCCCHHHHHHHHhc--CCCEEEECCCCCCCCC
Confidence 9999988877 9999999999999999999999999999998 33 46899999998863 3456777679999999
Q ss_pred CCCCHHHHHHHHHHHHhc-CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 211 VDPSEEQWKEISYQIKAK-GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
.++|.+++++|+++|+++ +++||+||+|.+|.+.+. . +. +....+++++++||||+|| ||||+||+++ +
T Consensus 227 ~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~---~-~~--~~~~~~~vi~~~SfSK~~~-~GlRiG~~i~---~ 296 (431)
T PRK15481 227 CSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPY---H-SV--IPQTTQRWALIRSVSKALG-PDLRLAFVAS---D 296 (431)
T ss_pred ccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCC---C-CC--CcCCCCCEEEEeeeccccC-CCceeEEEeC---C
Confidence 999999999999999999 999999999999974311 1 11 1112368999999999999 9999999985 4
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHH
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAEL 328 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 328 (337)
+++++++... ......+++.+.|.++..+|+++++
T Consensus 297 ~~~~~~~~~~----~~~~~~~~s~~~q~a~~~~l~~~~~ 331 (431)
T PRK15481 297 SATSARLRLR----LNSGTQWVSHLLQDLVYACLTDPEY 331 (431)
T ss_pred HHHHHHHHHH----HhccccCCCHHHHHHHHHHHhCccH
Confidence 6666665432 2222235789999999999998654
No 54
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-38 Score=304.54 Aligned_cols=256 Identities=16% Similarity=0.137 Sum_probs=198.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
+++++|+.|++. .++++.+.+++.+...+....|++..|.++||+++++|+.+..+..+++++ +++|+|++++
T Consensus 24 ~~~i~l~~g~~~-----~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~--i~~t~g~~~a 96 (382)
T PRK06108 24 EGVLPLWFGESD-----LPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPPER--IAVTSSGVQA 96 (382)
T ss_pred CCeEEecCCCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcce--EEEeCChHHH
Confidence 568999999753 334677888776642223456999999999999999998654443355665 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccC-CCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHP-GTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
+.+++..+.. |||+|++++|+|+.|...++..|++++.+|+..+ .++.+|++.+++.+.. +.++++ +++|||||
T Consensus 97 l~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~i~-l~~p~NPt 171 (382)
T PRK06108 97 LMLAAQALVG--PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITP--RTRALF-INSPNNPT 171 (382)
T ss_pred HHHHHHHhcC--CCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCc--cceEEE-EECCCCCC
Confidence 9999887766 8999999999999999999999999999998432 3577999999987752 334444 47899999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|+++|++++++||+||+|.++.++. .....+...+....+++++++||||.||++|+|+||+++ +
T Consensus 172 G~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~---~ 247 (382)
T PRK06108 172 GWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAP-GGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVA---P 247 (382)
T ss_pred CcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCC-CCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeC---C
Confidence 999999999999999999999999999999997641 111112222333346899999999999999999999986 4
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
+++++++.. .....+.+++.+.|.++..+|.+.
T Consensus 248 ~~~~~~~~~----~~~~~~~~~~~~~q~a~~~~l~~~ 280 (382)
T PRK06108 248 PALGQVLEK----LIEYNTSCVAQFVQRAAVAALDEG 280 (382)
T ss_pred HHHHHHHHH----HHHhcccCCChHHHHHHHHHHhCC
Confidence 556555543 223344568899999999999873
No 55
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=2.1e-38 Score=300.87 Aligned_cols=256 Identities=15% Similarity=0.079 Sum_probs=195.6
Q ss_pred eeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC-ceeEEeeccchhHH
Q 047180 53 KVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK-RIAAVQSLSGTGAC 131 (337)
Q Consensus 53 ~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g~~~al 131 (337)
+++|+.|.+ .+.+++.+.+++++... ....|++..|.++||+++++|+.++++..++++ + +++|+|+++++
T Consensus 2 ~~~~~~g~p-----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~--Iiit~Gs~~ai 73 (350)
T TIGR03537 2 LFDFGTGDP-----KEPTPPFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQ--VLPSAGSKEAI 73 (350)
T ss_pred eEeccCCCC-----CCCCCHHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--EEEcCChHHHH
Confidence 678999864 24456778887776422 356799999999999999999965544445555 4 57999999999
Q ss_pred HHHHHHHhhhCCC---CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 132 RLFADFQKRFHPD---SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 132 ~~~~~~l~~~~pg---d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
.+++.++.. +| |+|++++|+|+.|..+++..|++++.+++..++++.+|++.+++++.. +.++++ +++||||
T Consensus 74 ~~~~~~~~~--~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~--~~~~i~-i~~p~NP 148 (350)
T TIGR03537 74 FHFPLVFID--PEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILE--ETKIVW-INYPHNP 148 (350)
T ss_pred HHHHHHHcC--CCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhh--ccEEEE-EeCCCCC
Confidence 999887765 66 799999999999999999999999999984344677899999988763 334444 4789999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|++++++||+||+|.++.+++ ...+...+ ..+++++++||||.||++|+|+||++.
T Consensus 149 tG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~~--~~~~~i~~~s~SK~~g~~GlRiG~~~~--- 220 (350)
T TIGR03537 149 TGATAPRSYLKETIAMCREHGIILCSDECYTEIYFGE---PPHSALEV--GIENVLAFHSLSKRSGMTGYRSGFVAG--- 220 (350)
T ss_pred cCcccCHHHHHHHHHHHHHcCcEEEEeccccccccCC---CCCchhhc--CcCCEEEEeecccccCCccccceeeec---
Confidence 9999999999999999999999999999999986542 11112212 235899999999999999999999974
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
++++++++.. +......+++.+.|.++..++.++++.++.+
T Consensus 221 ~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r 261 (350)
T TIGR03537 221 DEKLISFLRK----LRANFGVASPDFVQAAAKAAWSDDNHVLERR 261 (350)
T ss_pred CHHHHHHHHH----HHHhhccCCCHHHHHHHHHHhCCcHHHHHHH
Confidence 4555555543 2222233556678888888887655443333
No 56
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5e-39 Score=315.90 Aligned_cols=264 Identities=17% Similarity=0.098 Sum_probs=187.5
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCC-Ccc-cccCceeEEeeccchh
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDN-SEF-IKDKRIAAVQSLSGTG 129 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~-~~~-~~~~~i~~~~t~g~~~ 129 (337)
+.|+|++|.+. ..+++.+.++.+.+.. ..|+++.|.++||++|++++..+. ... ..++..++++|+|+++
T Consensus 101 ~~i~l~~g~p~-----~~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~ 172 (527)
T PRK09275 101 DAVSYVRDQLG-----FDADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTA 172 (527)
T ss_pred HHHhhcCCCCC-----CCCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 57999999763 4456667776666522 249999999999999999664431 111 1111124689999999
Q ss_pred HHHHHHHHHh---hhCCCCeEEEcCCCCcchHHHHHhcCc--eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCC
Q 047180 130 ACRLFADFQK---RFHPDSQIYIPVPTWSNHHNIWRDAHV--TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHAC 204 (337)
Q Consensus 130 al~~~~~~l~---~~~pgd~Vlv~~P~y~~y~~~~~~~G~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~ 204 (337)
++.++++++. -..|||+|++++|+|+.|..+++..|+ ++++++...+++|.+|++++++.+. ++.+++++ ||
T Consensus 173 al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~--~~tkai~l-~n 249 (527)
T PRK09275 173 AMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRD--PSIKALFL-VN 249 (527)
T ss_pred HHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcC--CCCCEEEE-eC
Confidence 9998887531 123999999999999999999988765 4555554334468999999988664 33445555 78
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHh--cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccce
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKA--KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGC 282 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~--~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~ 282 (337)
||||||.++|++++++|+++|++ ++++||+||+|.+|.+. + .++... ..+++|+++||||+|||+|||+||
T Consensus 250 P~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-~----~s~~~~--~~~~~I~v~SfSK~f~mtG~RlG~ 322 (527)
T PRK09275 250 PSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD-F----RSLFAV--LPYNTILVYSFSKYFGATGWRLGV 322 (527)
T ss_pred CcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc-c----cCHHHh--CCCCEEEEeehhhhccCcHhHHhh
Confidence 99999999999999999999965 49999999999998642 1 112111 235899999999999999999999
Q ss_pred eEeeeCCHHHHHHHHHHH--------------------------------HhhhcccccCCChhHHHHH-----HHHhCC
Q 047180 283 LSVLCEDEKQAVAVKSQL--------------------------------QQLARPMYSNPPVHGALIV-----STILGD 325 (337)
Q Consensus 283 ~~~~~~~~~~~~~~~~~l--------------------------------~~~~~~~~~~~~~~~q~~~-----~~~l~~ 325 (337)
++++ .+.+.+++...+ ..+...+.++++++.|.++ ..+|+.
T Consensus 323 i~~~--~~~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~ 400 (527)
T PRK09275 323 IALH--EDNVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDE 400 (527)
T ss_pred hhcC--chhHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhC
Confidence 9874 333333332222 4555556678899899873 345654
Q ss_pred -HHHHHHHHhh
Q 047180 326 -AELKKLWLKE 335 (337)
Q Consensus 326 -~~~~~~w~~e 335 (337)
.++.++.+++
T Consensus 401 ~~~~~~~~~~~ 411 (527)
T PRK09275 401 EDAYKKAMKDI 411 (527)
T ss_pred chHHHHHHHHH
Confidence 3444444443
No 57
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=4.5e-38 Score=304.03 Aligned_cols=286 Identities=15% Similarity=0.109 Sum_probs=209.7
Q ss_pred chhhHHHHHhcC--CCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcc
Q 047180 37 PILGVTEAFLAD--PSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEF 113 (337)
Q Consensus 37 ~~~~~~~~~~~~--~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~ 113 (337)
++.++...+++. .+.+.++|+.|.|.. .+..++++.+.+++.+. ......+|.+..|.++||+++++++..+.+..
T Consensus 15 ~~~~~~~~~~~~~~~~~~~i~l~~g~p~~-~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 93 (403)
T TIGR01265 15 PIRAIVDNLKVKPNPEKPIIPLSHGDPSV-FGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGK 93 (403)
T ss_pred HHHHHHHHHHHHHhcCCCeEEeCCCCCCc-cCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 455555555543 236899999997631 12345667777777653 33334579889999999999999986543333
Q ss_pred cccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC
Q 047180 114 IKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA 193 (337)
Q Consensus 114 ~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 193 (337)
+++++ +++|+|+++++.+++.++.. +||+|++++|+|+.|...++..|.+++.+++...+++++|++.+++.+..
T Consensus 94 ~~~~~--ii~t~G~t~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~- 168 (403)
T TIGR01265 94 LTADD--VVLTSGCSQAIEICIEALAN--PGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADE- 168 (403)
T ss_pred CCHHH--EEEecChHHHHHHHHHHhCC--CCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCc-
Confidence 45555 57899999999999988765 89999999999999999999999999999874444678999999887752
Q ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc
Q 047180 194 PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM 273 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 273 (337)
+.++++ +++||||||.+++.+++++|+++|+++|++||+||+|.+|.+++ ....++..+.. ..++|+++||||.|
T Consensus 169 -~~~~v~-i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~-~~~vi~~~S~SK~~ 243 (403)
T TIGR01265 169 -KTVAIV-VINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGD--APFIPMASFAS-IVPVLSLGGISKRW 243 (403)
T ss_pred -CccEEE-EecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC--CCccchhhhcc-CCcEEEEeeccccc
Confidence 334444 48899999999999999999999999999999999999998642 11223333322 24799999999999
Q ss_pred cccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC--HHHHHHHHh
Q 047180 274 GLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD--AELKKLWLK 334 (337)
Q Consensus 274 ~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~w~~ 334 (337)
++||+|+||++++.+.....+++...+..+... ..+++.+.|.++..+|.+ ..+.++.++
T Consensus 244 ~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 305 (403)
T TIGR01265 244 VVPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQR-ILGPATIVQGALPDILENTPQEFFDGKIS 305 (403)
T ss_pred CCCcceEEEEEEeCchhhhHHHHHHHHHHHhhh-hcCCChHHHHHHHHHHHhChHHHHHHHHH
Confidence 999999999987422122222244444433322 235788999999999974 344444443
No 58
>PRK07324 transaminase; Validated
Probab=100.00 E-value=1.3e-38 Score=304.85 Aligned_cols=244 Identities=17% Similarity=0.134 Sum_probs=190.9
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHH-HHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAE-RRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
..++++|++|++. ..+++.+ ++. +.+.. ...+|++..|.++||++|++|+.+ +++++ +++|+|++
T Consensus 25 ~~~~~~~~~~e~~-----~~~~~~~-~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~-----~~~~~--vi~t~G~~ 90 (373)
T PRK07324 25 ESCIDSLTLEELL-----ALAGKNP-EAFYQELGQ-KKLTYGWIEGSPEFKEAVASLYQN-----VKPEN--ILQTNGAT 90 (373)
T ss_pred cCCCCCCcHHHHH-----hccCcch-HHHHHHHhc-CCccCCCCCCCHHHHHHHHHHhcC-----CChhh--EEEcCChH
Confidence 3579999999764 3334445 443 33322 346899999999999999999743 23455 47899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.. |||+|+++.|+|+.|...++..|++++.+|+..++++.+|++.+++.+.. +.++ +++|+||||
T Consensus 91 ~al~~~~~~l~~--~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~--~~kl-i~i~~p~NP 165 (373)
T PRK07324 91 GANFLVLYALVE--PGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRP--NTKL-ICINNANNP 165 (373)
T ss_pred HHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCC--CCcE-EEEeCCCCC
Confidence 999999888766 99999999999999999999999999999985444677899999887642 3344 455899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|++||++||+||+|.++.++. ...++ ....+++|+++||||.||++|||+||+++
T Consensus 166 tG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~---~~~s~---~~~~~~~I~~~s~SK~~~~~G~RiG~i~~--- 236 (373)
T PRK07324 166 TGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDG---STPSI---ADLYEKGISTNSMSKTYSLPGIRVGWIAA--- 236 (373)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCC---CCCCh---hhccCCEEEEecchhhcCCccceeEEEec---
Confidence 9999999999999999999999999999999987541 11122 22346789999999999999999999985
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++.. +......+++.+.|.++..+|++
T Consensus 237 ~~~li~~~~~----~~~~~~~~~~~~~q~~a~~~l~~ 269 (373)
T PRK07324 237 NEEVIDILRK----YRDYTMICAGVFDDMLASLALEH 269 (373)
T ss_pred CHHHHHHHHH----HhCcEEecCChHHHHHHHHHHcC
Confidence 4666555543 33333446788999999999986
No 59
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=5.3e-38 Score=303.65 Aligned_cols=264 Identities=14% Similarity=0.069 Sum_probs=196.0
Q ss_pred CCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 49 PSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 49 ~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
.+.++++|+.|.+.. -+ ..+++.+.+++.+... ...+|++..|.++||+++++|+..++...+++++ +++|+|++
T Consensus 31 ~~~~~i~l~~g~p~~-~~-~~~~~~i~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~--i~~t~G~~ 105 (404)
T PRK09265 31 EGHKILKLNIGNPAP-FG-FEAPDEILRDVIRNLP-TAQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDD--IYIGNGVS 105 (404)
T ss_pred cCCCeEEecCCCCCc-CC-CCCCHHHHHHHHHHhh-cCCCCCCCCCcHHHHHHHHHHHhccCCCCCCccc--EEEeCChH
Confidence 446789999996521 01 1244555554433212 2467999999999999999999665543455665 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.. |||+|++++|+|+.|...++..|++++.+++..++++.+|++++++.+.. +.++++ ++|||||
T Consensus 106 ~~l~~~~~~~~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~--~~~~v~-l~~P~NP 180 (404)
T PRK09265 106 ELIVMAMQALLN--NGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITP--RTKAIV-IINPNNP 180 (404)
T ss_pred HHHHHHHHHhCC--CCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccc--cceEEE-EECCCCC
Confidence 999998877765 89999999999999999999999999998874334577999999987752 333444 4789999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|++++++||+||+|.+|.++. ....++..+.. ..++++++||||.||+||+|+||++++ .
T Consensus 181 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~--~~~~~~~~~~~-~~~vi~~~S~SK~~~~pGlRiG~~v~~-~ 256 (404)
T PRK09265 181 TGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDG--AVHISIASLAP-DLLCVTFNGLSKAYRVAGFRVGWMVLS-G 256 (404)
T ss_pred CCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCC--CCcCCHHHcCC-CceEEEEecchhhccCcccceEEEEEe-C
Confidence 9999999999999999999999999999999997632 11122322321 247899999999999999999999864 3
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
++...+.+.+.+..+ .....+++.++|.++..+|.+.+
T Consensus 257 ~~~~~~~~~~~~~~~-~~~~~~~~~~~q~~~~~~l~~~~ 294 (404)
T PRK09265 257 PKKHAKGYIEGLDML-ASMRLCANVPAQHAIQTALGGYQ 294 (404)
T ss_pred chHHHHHHHHHHHHH-hccccCCCcHHHHHHHHHhcCch
Confidence 454444454444432 22334678899999999998643
No 60
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-38 Score=305.02 Aligned_cols=255 Identities=15% Similarity=0.127 Sum_probs=196.5
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
++++++|+.|.+. +.+++.+.+++.+.......+|++..|.++||+++++++.+..+..+++++ +++|+|+++
T Consensus 32 ~~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~--i~~t~G~~~ 104 (402)
T PRK06107 32 GRSIVDLTVGEPD-----FDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYADNE--ITVGGGAKQ 104 (402)
T ss_pred cCCEEEcCCCCCC-----CCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhh--EEEeCCHHH
Confidence 4578999999753 334677777776642223467999999999999999998655444345555 579999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
|+.+++..+.. +||+|++++|+|+.|...+...|++++.+++..++++.+|++.+++.+.. +.+++++ +||||||
T Consensus 105 al~~~~~~~~~--~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~--~~~~v~l-~~p~NPt 179 (402)
T PRK06107 105 AIFLALMATLE--AGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITP--RTRWLIL-NAPSNPT 179 (402)
T ss_pred HHHHHHHHhcC--CCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCc--CceEEEE-ECCCCCC
Confidence 99999877655 99999999999999999999999998888874334577899999987752 3344554 7899999
Q ss_pred CCCCCHHHHHHHHHHHHhc-CceeEEcccCCCCCCCCCccchHHHHHhhh-cCCeEEEEecccccccccccccceeEeee
Q 047180 210 GVDPSEEQWKEISYQIKAK-GHFPFFDMAYQGFASGDPERDAKAIRIFLK-DGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
|.+++.+++++|+++|+++ +++||+||+|.++.+++. ...++..+.. ..+++++++||||.|++||+|+||+++
T Consensus 180 G~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~--~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~-- 255 (402)
T PRK06107 180 GAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDE--PTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAG-- 255 (402)
T ss_pred CcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCC--CCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeec--
Confidence 9999999999999999998 999999999999875421 1122222322 235899999999999999999999985
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++.. .......+++.+.|.++..+|++
T Consensus 256 -~~~~~~~~~~----~~~~~~~~~s~~~q~~~~~~l~~ 288 (402)
T PRK06107 256 -PADLIAAINK----LQSQSSSCPSSISQAAAAAALNG 288 (402)
T ss_pred -CHHHHHHHHH----HHHhcccCCChHHHHHHHHHhcC
Confidence 4555555543 33333346889999999999974
No 61
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=8.6e-39 Score=304.29 Aligned_cols=269 Identities=20% Similarity=0.231 Sum_probs=203.2
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH--hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC-ceeEEeeccch
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR--IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK-RIAAVQSLSGT 128 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~--~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g~~ 128 (337)
++|||+.|.+....++ ++++.+.++..+ ......+.|++..|.++||+++++|+.+.++...+++ . ++++.|++
T Consensus 2 ~~I~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~--i~~~~G~~ 78 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQN-PPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEAN--ILVTSGAQ 78 (363)
T ss_dssp TEEESSSSSTSSTTSS-HHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEG--EEEESHHH
T ss_pred CEEEEECCCCCCcccc-cchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceE--EEEecccc
Confidence 5899999987654444 344444444332 2334567999999999999999999974444445555 4 57788888
Q ss_pred hHHHHHHHHH-hhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC---CeEEEEeCC
Q 047180 129 GACRLFADFQ-KRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN---GSFFLLHAC 204 (337)
Q Consensus 129 ~al~~~~~~l-~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~ili~~~ 204 (337)
+++.++..++ .. +||+|++++|+|+.|...++..|++++++++..++++.+|++.+++.+++.+. +..++++|+
T Consensus 79 ~~~~~~~~~~~~~--~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~ 156 (363)
T PF00155_consen 79 AALFLLLRLLKIN--PGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICN 156 (363)
T ss_dssp HHHHHHHHHHHSS--TTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEES
T ss_pred cchhhhhhccccc--ccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeecc
Confidence 8888888777 44 89999999999999999999999999999986566789999999999986321 234566699
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeE
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
||||||.+++.+++++|+++|++++++||+||+|.++.+++. +..+.........++++++||||+||++|+|+||++
T Consensus 157 p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~ 234 (363)
T PF00155_consen 157 PNNPTGSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDP--DFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIV 234 (363)
T ss_dssp SBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSS--HTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEE
T ss_pred cccccccccccccccchhhhhcccccceeeeeceeccccCCC--ccCcccccccccccceeeeecccccccccccccccc
Confidence 999999999999999999999999999999999999987532 222222233344569999999999999999999998
Q ss_pred eeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhhh
Q 047180 285 VLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKEV 336 (337)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~el 336 (337)
+ +++.++.+. .... .+.. +.+.|.++..++.+.....+|.+++
T Consensus 235 ~---~~~~~~~l~----~~~~-~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~ 277 (363)
T PF00155_consen 235 A---PPELIERLR----RFQR-SGLS-SSPMQAAAAAALSDPELVEKWLEEL 277 (363)
T ss_dssp E---EHHHHHHHH----HHHH-HTTS-SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c---hhhhhhhhh----hccc-cccc-cchhhHHHHHhhhcccccccccccc
Confidence 7 345555444 3332 2333 8899999999999877555565543
No 62
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-38 Score=309.13 Aligned_cols=262 Identities=16% Similarity=0.178 Sum_probs=206.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh---cCcC-CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI---AGTA-NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~---~~~~-~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
+..++|+.|.+. ...++...++++...+ .... ...|.+..|.++||++|++|+....+...++++ +++|.|
T Consensus 89 ~~~i~f~~g~p~---~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~--IiiT~G 163 (459)
T COG1167 89 PSVIDFAGGLPD---PSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQ--IVITSG 163 (459)
T ss_pred CceecCCCCCCC---cccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCe--EEEeCC
Confidence 678999998743 2344555677766554 2222 568888899999999999999733333345554 689999
Q ss_pred chhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCC
Q 047180 127 GTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAH 206 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~ 206 (337)
+++|+.++++++.+ |||+|++++|+|+...++++.+|.+++++|++ +.|+|+|.|++.+... +.++++++|+.|
T Consensus 164 ~q~al~l~~~~l~~--pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d---~~G~~~e~le~~~~~~-~~k~~y~~P~~q 237 (459)
T COG1167 164 AQQALDLLLRLLLD--PGDTVLVEDPTYPGALQALEALGARVIPVPVD---EDGIDPEALEEALAQW-KPKAVYVTPTFQ 237 (459)
T ss_pred HHHHHHHHHHHhCC--CCCEEEEcCCCcHHHHHHHHHcCCcEEecCCC---CCCCCHHHHHHHHhhc-CCcEEEECCCCC
Confidence 99999999999887 99999999999999999999999999999984 4789999999998754 357889999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 207 NPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 207 NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
||||.+||.++.++|+++|+++|++||+||+|.+|.++.. +..++..+.. .++||+++||||+++ ||+|+||++++
T Consensus 238 NPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~--p~~~l~~ld~-~~rViy~gSFSK~l~-PglRlG~vv~p 313 (459)
T COG1167 238 NPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGP--PPPPLKALDA-PGRVIYLGSFSKTLA-PGLRLGYVVAP 313 (459)
T ss_pred CCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCC--CCCChHhhCC-CCCEEEEeeehhhcc-cccceeeeeCC
Confidence 9999999999999999999999999999999999986522 2223443332 469999999999998 89999999873
Q ss_pred eCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 287 CEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 287 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
+++++++.. .......+++.+.|.+++..+.++.+ ++|.+.
T Consensus 314 ---~~~~~~~~~----~k~~~~~~~s~~~Q~~la~~l~~G~~-~~hl~~ 354 (459)
T COG1167 314 ---PELIEKLLR----LKQAADLGPSSLSQAALAAFLLSGHY-DRHLRR 354 (459)
T ss_pred ---HHHHHHHHH----HHHHhcCCCChHHHHHHHHHHHcCCH-HHHHHH
Confidence 455555543 33334556889999999999996433 444443
No 63
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.1e-37 Score=299.86 Aligned_cols=272 Identities=14% Similarity=0.090 Sum_probs=197.9
Q ss_pred CCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhC
Q 047180 30 VEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYG 108 (337)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~ 108 (337)
+...+...+..+...++ .++++||++|.+.. ..++.+.++..+ +.. ...+|++..|.++||+++++|+..
T Consensus 6 ~~~~~~~~~~~~~~~~~---~~~~i~l~~g~p~~-----~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~ 76 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV---RTGAVNLGQGFPDE-----DGPPEMLEAAQEAIAG-GVNQYPPGPGIPELRAAIAAQRRR 76 (387)
T ss_pred hhhcCccHHHHHHHHHh---hCCeEEccCCCCCC-----CCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHH
Confidence 33344444555554443 24789999998642 123345554444 322 346799899999999999999755
Q ss_pred CCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccC-CCCCCChHHHH
Q 047180 109 DNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHP-GTKGLDFAALM 187 (337)
Q Consensus 109 ~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~-~~~~~d~~~l~ 187 (337)
+++...++++ ++++|.|+++++.+++..+.. +||+|+++.|+|+.|..+++..|++++.+++.+. .++.+|+++++
T Consensus 77 ~~g~~~~~~~-~i~~t~G~~~al~~~~~~~~~--~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~ 153 (387)
T PRK07777 77 RYGLEYDPDT-EVLVTVGATEAIAAAVLGLVE--PGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALR 153 (387)
T ss_pred HhCCCCCCCC-cEEEeCCcHHHHHHHHHHhcC--CCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHH
Confidence 4433333431 257899999999988877665 8999999999999999999999999999998543 35779999999
Q ss_pred HHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEe
Q 047180 188 DDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQ 267 (337)
Q Consensus 188 ~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (337)
+.+.. +.++++ +||||||||.+++.+++++|+++|++++++||+||+|.++.+++. ...++..+....+++++++
T Consensus 154 ~~~~~--~~~~v~-l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~--~~~~~~~~~~~~~~~i~~~ 228 (387)
T PRK07777 154 AAVTP--RTRALI-VNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA--RHLPLATLPGMRERTVTIS 228 (387)
T ss_pred HhcCc--ccEEEE-EcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC--CcccHhhCCCCcCcEEEEe
Confidence 87753 334555 489999999999999999999999999999999999999876321 1122322322245899999
Q ss_pred cccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 268 SYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 268 S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
||||.||+||+|+||+++ ++++++++.. .......+.+.+.|.++..++.+
T Consensus 229 S~SK~~g~~GlRiG~~~~---~~~l~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~ 279 (387)
T PRK07777 229 SAAKTFNVTGWKIGWACG---PAPLIAAVRA----AKQYLTYVGGAPFQPAVAHALDH 279 (387)
T ss_pred echhhccCcCceeEEEec---CHHHHHHHHH----HHhhcccCCCCHHHHHHHHHHhC
Confidence 999999999999999985 4555555443 22222224567789888888875
No 64
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.2e-37 Score=301.05 Aligned_cols=261 Identities=18% Similarity=0.171 Sum_probs=186.0
Q ss_pred hHHHHHhc-CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cC----cCCCCCCCCCCCHHHHHHHHHHHhCCCCcc
Q 047180 40 GVTEAFLA-DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AG----TANMEYLPMGGSVKMVEETLKLAYGDNSEF 113 (337)
Q Consensus 40 ~~~~~~~~-~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~ 113 (337)
.+....+. .+..++++|+.|.+. ..+++.+.+++.+. .. ....+|.|..|.++||+++|+++++..
T Consensus 21 ~~~~~~~~~~~~~~~i~l~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~~--- 92 (402)
T TIGR03542 21 RRVNEFRKKHPSADIIRLGIGDTT-----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRGR--- 92 (402)
T ss_pred HHHHHHHhccCCCCeEEcCCCCCC-----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhcC---
Confidence 44444433 234678999999642 34566666666553 21 123579899999999999999875433
Q ss_pred cccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCc-----------eeeEeeeccCCCCCCC
Q 047180 114 IKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHV-----------TQRTFHYYHPGTKGLD 182 (337)
Q Consensus 114 ~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~-----------~~~~~~~~~~~~~~~d 182 (337)
+++++ +++|+|+++++.++..++ . +||+|++++|+|+.|...++..|+ +++++|+..++++.+|
T Consensus 93 ~~~d~--I~it~Ga~~al~~l~~l~-~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 167 (402)
T TIGR03542 93 IDPEE--IFISDGAKCDVFRLQSLF-G--SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPD 167 (402)
T ss_pred CCHHH--EEECCCcHHHHHHHHHhc-C--CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCC
Confidence 45565 579999999998865444 3 899999999999999999999999 9999987433344444
Q ss_pred hHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCe
Q 047180 183 FAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHL 262 (337)
Q Consensus 183 ~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 262 (337)
++. ..+.+++++ ||||||||.++|.+++++|+++|++++++||+||+|.+|.+++. ...++..+....++
T Consensus 168 ~~~-------~~~~~~i~l-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~--~~~~~~~~~~~~~~ 237 (402)
T TIGR03542 168 LPE-------EPKIDIIYL-CSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS--LPHSIFEIPGAKEC 237 (402)
T ss_pred ccc-------cCCceEEEE-eCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC--CCcchhhCCCCccc
Confidence 321 123345555 79999999999999999999999999999999999999975421 11122223222357
Q ss_pred EEEEecccccccccccccceeEeeeCCHHHH----HHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 263 LGLAQSYAKNMGLYGQRVGCLSVLCEDEKQA----VAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 263 ~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
+|+++||||.||+||+|+||+++ +++++ +.+...........+.+++.++|.++..+|.++
T Consensus 238 vi~~~SfSK~~g~pGlRiG~~i~---~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 302 (402)
T TIGR03542 238 AIEFRSFSKTAGFTGVRLGWTVV---PKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGE 302 (402)
T ss_pred EEEEecCccccCCCCcceEEEEe---cHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCc
Confidence 89999999999999999999986 34443 122222221122334457889999999999864
No 65
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=2.8e-37 Score=297.75 Aligned_cols=256 Identities=12% Similarity=0.055 Sum_probs=189.0
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
.+++++|+.|.+. ..+++.+.+++.+ +......+|++..|.++||+++++|+..+++...++++ ++++|+|++
T Consensus 28 ~~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~-~i~~t~G~~ 101 (395)
T PRK08175 28 GEDIIDFSMGNPD-----GPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPES-EAIVTIGSK 101 (395)
T ss_pred CCCeEEcCCCCCC-----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-cEEEccCcH
Confidence 4678999998653 2234445444333 33334578999999999999999998655444344442 257899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.+ |||+|++++|+|+.|...++..|++++.+++..+ +.+++.+++.+.....+..++++++||||
T Consensus 102 ~~l~~~~~~~~~--~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---~~~~~~l~~~l~~~~~~~~~v~i~~p~NP 176 (395)
T PRK08175 102 EGLAHLMLATLD--HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG---VDFFNELERAIRESYPKPKMMILGFPSNP 176 (395)
T ss_pred HHHHHHHHHhCC--CCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC---CCcHHHHHHHHhhccCCceEEEEeCCCCC
Confidence 999998877766 9999999999999999999999999999998432 23477888777643222334444799999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|+++|++||+||+|.++.+++. ...++..+....+++++++||||.||+||+|+||+++
T Consensus 177 tG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~--- 251 (395)
T PRK08175 177 TAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW--KAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG--- 251 (395)
T ss_pred CCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC--CCcchhcCCCcccCEEEEeeccccccCcchhheeeeC---
Confidence 99999999999999999999999999999999876321 1122222222235788899999999999999999974
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++.. +......+++.+.|.++..+|++
T Consensus 252 ~~~l~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~ 284 (395)
T PRK08175 252 NPELVSALAR----IKSYHDYGTFTPLQVAAIAALEG 284 (395)
T ss_pred CHHHHHHHHH----HHhhcccCCCcHHHHHHHHHHhC
Confidence 5666665543 22222335677789999999975
No 66
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.8e-37 Score=295.72 Aligned_cols=246 Identities=14% Similarity=0.123 Sum_probs=186.3
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCc-CCCCCCCCCCCHHHHHHHHHHHhCCC--CcccccCceeEEeecc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGT-ANMEYLPMGGSVKMVEETLKLAYGDN--SEFIKDKRIAAVQSLS 126 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~--~~~~~~~~i~~~~t~g 126 (337)
+..++|+.|++. ..+++.+.+++.+. ... ....|+ ..|.++||+++++|+.+++ +..+++++ +++|+|
T Consensus 28 ~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~--I~it~G 99 (374)
T PRK02610 28 IQLDRLDTNEFP-----YDLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPAN--ISVGNG 99 (374)
T ss_pred cceeEecCCCCC-----CCCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHH--EEEcCC
Confidence 357889998642 34667788777653 222 134684 5799999999999986543 23355665 578999
Q ss_pred chhHHHHHHHHHhhhCCCC-eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC--CCCeEEEEeC
Q 047180 127 GTGACRLFADFQKRFHPDS-QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--PNGSFFLLHA 203 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd-~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~ili~~ 203 (337)
+++++.+++.++.. +|| +|++++|+|+.|...++..|++++.+++ +++++++|++++++.+... ++.+++++ |
T Consensus 100 a~~al~~~~~~~~~--~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~~~k~i~l-~ 175 (374)
T PRK02610 100 SDELIRSLLIATCL--GGEGSILVAEPTFSMYGILAQTLGIPVVRVGR-DPETFEIDLAAAQSAIEQTQNPPVRVVFV-V 175 (374)
T ss_pred hHHHHHHHHHHHcC--CCCCeEEEcCCChHHHHHHHHHcCCEEEEecC-CcccCCCCHHHHHHHHHhhcCCCceEEEE-e
Confidence 99999877665544 675 8999999999999999999999999997 4446899999999887631 23345555 6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccccccee
Q 047180 204 CAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCL 283 (337)
Q Consensus 204 ~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~ 283 (337)
|||||||.++|++++++|++++ ++++||+||+|.+|.+. . .+..+. ..+++|+++||||+||+||+|+||+
T Consensus 176 ~P~NPTG~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~---~---~~~~~~-~~~~~ivi~SfSK~~g~~GlRiG~~ 246 (374)
T PRK02610 176 HPNSPTGNPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT---T---LVGELA-QHPNWVILRTFSKAFRLAAHRVGYA 246 (374)
T ss_pred CCCCCCCCCCCHHHHHHHHhcc--CCcEEEEeccccccCcc---c---hHHHHh-cCCCEEEEEecchhccCcccceeee
Confidence 8999999999999999999976 49999999999998531 1 122222 2357899999999999999999999
Q ss_pred EeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 284 SVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++ ++++++++.. .. ..| +.+.+.|.++..+|++.
T Consensus 247 v~---~~~l~~~l~~----~~-~~~-~~~~~~q~a~~~~l~~~ 280 (374)
T PRK02610 247 IG---HPELIAVLEK----VR-LPY-NLPSFSQLAAQLALEHR 280 (374)
T ss_pred ec---CHHHHHHHHH----hc-CCC-CCCHHHHHHHHHHhcCH
Confidence 85 5666555543 22 234 46889999999999874
No 67
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-37 Score=298.25 Aligned_cols=280 Identities=17% Similarity=0.148 Sum_probs=210.0
Q ss_pred cccccccCCCCCCCchhhHHHHHhc--CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHH
Q 047180 23 MSSWWRNVEPAAKDPILGVTEAFLA--DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMV 99 (337)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr 99 (337)
||.+.+.+....++.+.++.+..++ ...+..++|+.|.+. +.+++.+.+++.+. .. ....|++..|.++||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr 74 (393)
T PRK05764 1 MMKLSKRVSRVTPSATLAVTAKAKELKAQGRDVISLGAGEPD-----FDTPEHIKEAAIEALDD-GKTKYTPAAGIPELR 74 (393)
T ss_pred CcchhhhhhhcCchHHHHHHHHHHHHHhccCCEEEeCCCCCC-----CCCCHHHHHHHHHHHhc-CCCCcCCCCChHHHH
Confidence 3444556666666666554433332 223578999999753 33457787777653 32 234699999999999
Q ss_pred HHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCC
Q 047180 100 EETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTK 179 (337)
Q Consensus 100 ~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~ 179 (337)
+++++|+...++..+++++ +++|+|+++++.+++..+.. +||+|++++|+|+.|..+++..|.+++.+++..++++
T Consensus 75 ~~ia~~~~~~~~~~~~~~~--i~~~~g~~~a~~~~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 150 (393)
T PRK05764 75 EAIAAKLKRDNGLDYDPSQ--VIVTTGAKQALYNAFMALLD--PGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGF 150 (393)
T ss_pred HHHHHHHHHHhCCCCCHHH--EEEeCCcHHHHHHHHHHhcC--CCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCC
Confidence 9999998554333345555 57899999999998877665 8999999999999999999999999999998534467
Q ss_pred CCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHh-hh
Q 047180 180 GLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIF-LK 258 (337)
Q Consensus 180 ~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~-~~ 258 (337)
.+|++.+++.+.. ..+.+ ++++||||||.+++.+++++|+++|++|++++|+||+|.++.++.. ...++..+ ..
T Consensus 151 ~~d~~~l~~~l~~--~~~~v-~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~--~~~~~~~~~~~ 225 (393)
T PRK05764 151 KLTVEQLEAAITP--KTKAL-ILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGA--EFTSIASLSPE 225 (393)
T ss_pred cCCHHHHHHhhCc--cceEE-EEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCC--CcccHHHcCCC
Confidence 8999999988752 33444 4589999999999999999999999999999999999999875321 11223333 22
Q ss_pred cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 259 DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 259 ~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
...++++++||||.||++|+|+||+++ ++++++++.. .......+++.+.|.++..+|+
T Consensus 226 ~~~~~i~~~s~SK~~~~~G~RiG~i~~---~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~ 284 (393)
T PRK05764 226 LRDRTITVNGFSKAYAMTGWRLGYAAG---PKELIKAMSK----LQSHSTSNPTSIAQYAAVAALN 284 (393)
T ss_pred CcCCEEEEecCcccccCccceeEEEec---CHHHHHHHHH----HHhhcccCCChHHHHHHHHHHc
Confidence 245899999999999999999999985 5666555543 3333455688899999999997
No 68
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-37 Score=297.29 Aligned_cols=261 Identities=16% Similarity=0.131 Sum_probs=196.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.++++|+.|.+. ..+++.+.+++.+.. ....+|++..|.++||+++++++.. ++...++++ +++|+|++++
T Consensus 30 ~~~i~l~~~~~~-----~~~~~~~~~a~~~~~-~~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~~~--i~~t~G~~~a 100 (397)
T PRK07568 30 IKVYHLNIGQPD-----IKTPEVFFEAIKNYD-EEVLAYSHSQGIPELREAFAKYYKK-WGIDVEPDE--ILITNGGSEA 100 (397)
T ss_pred CCEEEecCCCCC-----CCCCHHHHHHHHHHh-cCCcCcCCCCCCHHHHHHHHHHHHH-hCCCCCcce--EEEcCChHHH
Confidence 468999998642 334567777776542 2356799999999999999999863 333345555 5799999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCC-ChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGL-DFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~-d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
+.+++..+.. |||+|++++|+|+.|...++..|.+++.+++..++++.. +++.+++.+.. +.++ +++++|||||
T Consensus 101 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~--~~~~-v~i~~p~NPt 175 (397)
T PRK07568 101 ILFAMMAICD--PGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITP--KTKA-ILISNPGNPT 175 (397)
T ss_pred HHHHHHHhcC--CCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCc--cceE-EEEECCCCCC
Confidence 9999877755 999999999999999999999999999998743333443 57888887752 3334 4457899999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|+++|++++++||+||+|.+|.+++ ....++..+....+++++++||||.||++|+|+||+++ ++
T Consensus 176 G~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~--~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~--~~ 251 (397)
T PRK07568 176 GVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDG--LKYTSALSLEGLEDRVIIIDSVSKRYSACGARIGCLIS--KN 251 (397)
T ss_pred CccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCC--CCccChhhcCCCcCCEEEEecchhhccCCCcceEEEec--CC
Confidence 999999999999999999999999999999997532 11222333333346899999999999999999999976 46
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC-HHHHHHHHh
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD-AELKKLWLK 334 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~w~~ 334 (337)
+++++++... ....+ +++.+.|.++..+|++ .++.+++++
T Consensus 252 ~~~~~~~~~~----~~~~~-~~s~~~q~~~~~~l~~~~~~~~~~~~ 292 (397)
T PRK07568 252 KELIAAAMKL----CQARL-SPPTLEQIGAAALLDTPESYFDEVRE 292 (397)
T ss_pred HHHHHHHHHH----hhccC-CCCcHHHHHHHHHhhCCHHHHHHHHH
Confidence 6666655432 12223 5788999999999985 344444443
No 69
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=4.6e-38 Score=300.12 Aligned_cols=248 Identities=13% Similarity=0.141 Sum_probs=189.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.++|+|+.|++. ..+++.+.+++.+.... ...| |..|.++||+++++|+ + +++++ +++|+|++++
T Consensus 29 ~~~i~l~~nen~-----~~~~~~v~~a~~~~~~~-~~~Y-p~~g~~~Lr~aia~~~-~-----~~~~~--I~vt~Gs~e~ 93 (366)
T PRK01533 29 HSFVKLASNENP-----FGCSPRVLDELQKSWLD-HALY-PDGGATTLRQTIANKL-H-----VKMEQ--VLCGSGLDEV 93 (366)
T ss_pred CceEEeCCCCCC-----CCCCHHHHHHHHHHHHh-cCcC-CCCCHHHHHHHHHHHh-C-----CCcce--EEECCCHHHH
Confidence 468999998642 34566777776543111 2235 6789999999999997 2 33555 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.++++++.+ |||+|++++|+|+.|...++..|++++.+|+ + ++++|++.+++.+.. ..++++ +||||||||
T Consensus 94 i~~~~~~l~~--~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~-~--~~~~d~~~l~~~~~~--~~~~v~-i~~P~NPTG 165 (366)
T PRK01533 94 IQIISRAVLK--AGDNIVTAGATFPQYRHHAIIEGCEVKEVAL-N--NGVYDLDEISSVVDN--DTKIVW-ICNPNNPTG 165 (366)
T ss_pred HHHHHHHhcC--CCCEEEEcCCcHHHHHHHHHHcCCEEEEeec-C--CCCcCHHHHHHHhCc--CCcEEE-EeCCCCCCC
Confidence 9999988776 9999999999999999999999999999997 3 367999999987753 334444 489999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|+++|++++ ++|+||+|.+|.++. .....+. .....+++|+++||||.||+||||+||+++ ++
T Consensus 166 ~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~--~~~~~~~-~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~---~~ 238 (366)
T PRK01533 166 TYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAK--DFPETLP-LLEKHKNILVLRTFSKAYGLASFRVGYAVG---HE 238 (366)
T ss_pred CCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccc--cCcchhH-HhccCCCEEEEeCchHHhcChHHHHhHHhC---CH
Confidence 9999999999999998876 566799999887531 1111222 223346899999999999999999999975 46
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
++++++.. . ...| +++.++|.++..+|+++++.++.++
T Consensus 239 ~~~~~l~~----~-~~~~-~~~~~~q~aa~~~l~~~~~~~~~~~ 276 (366)
T PRK01533 239 ELIEKLNV----V-RLPF-NVSSLAQKAATIAFGDDEFIEEIVR 276 (366)
T ss_pred HHHHHHHH----h-cCCC-CcCHHHHHHHHHHhCCHHHHHHHHH
Confidence 66665543 2 2334 5899999999999998766555443
No 70
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.3e-37 Score=296.91 Aligned_cols=268 Identities=15% Similarity=0.119 Sum_probs=195.8
Q ss_pred cccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHH
Q 047180 25 SWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLK 104 (337)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~ 104 (337)
.+.++++..+...+.++....... ..++++|+.|.+. .+.++.+.+++..... ..+|++..|.++||+++++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~~~p~-----~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~ 73 (364)
T PRK07865 2 PVSARLPDFPWDTLAPAKATAAAH-PDGIVDLSVGTPV-----DPVPPVIQEALAAAAD--APGYPTTAGTPELREAIVG 73 (364)
T ss_pred CccccCCCccHHHHHHHHHHHHhc-CCCEEEcCCCCCC-----CCCCHHHHHHHHHHHh--hCCCCCccCCHHHHHHHHH
Confidence 334456666666666665444343 2468999999642 2335677777665421 2479989999999999999
Q ss_pred HHhCCCCcc-cccCceeEEeeccchhHHHHHHHHH-hhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCC
Q 047180 105 LAYGDNSEF-IKDKRIAAVQSLSGTGACRLFADFQ-KRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLD 182 (337)
Q Consensus 105 ~~~~~~~~~-~~~~~i~~~~t~g~~~al~~~~~~l-~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d 182 (337)
|+.++++.. +++++ +++|+|+++++.+++.++ .. |||+|++++|+|+.|...++..|++++.++.
T Consensus 74 ~l~~~~~~~~~~~~~--I~it~G~~~~i~~~~~~l~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~--------- 140 (364)
T PRK07865 74 WLARRRGVTGLDPAA--VLPVIGSKELVAWLPTLLGLG--PGDVVVIPELAYPTYEVGARLAGATVVRADS--------- 140 (364)
T ss_pred HHHHHcCCCCCCccc--EEEccChHHHHHHHHHHHcCC--CCCEEEECCCCcccHHHHHHhcCCEEEecCC---------
Confidence 997654443 55665 579999999999887766 34 8999999999999999999999999887742
Q ss_pred hHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh----
Q 047180 183 FAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK---- 258 (337)
Q Consensus 183 ~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~---- 258 (337)
++.+.. .+.+++++ +|||||||.+++.+++++|+++|++++++||+||+|.+|.++. .. ...+..
T Consensus 141 ~~~l~~-----~~~~~v~~-~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~--~~~~~~~~~~ 209 (364)
T PRK07865 141 LTELGP-----QRPALIWL-NSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDA---EP--VSILDPRVCG 209 (364)
T ss_pred hhhCCc-----ccceEEEE-cCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCC---CC--CccccccccC
Confidence 222221 12345555 6899999999999999999999999999999999999987532 11 111111
Q ss_pred -cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHH
Q 047180 259 -DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKL 331 (337)
Q Consensus 259 -~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 331 (337)
..+++++++||||.||+||+|+||+++ ++++++++... ......+++.+.|.++..+|.+.+..++
T Consensus 210 ~~~~~~i~~~S~SK~~~~~GlRiG~i~~---~~~~~~~~~~~----~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 276 (364)
T PRK07865 210 GDHTGLLAVHSLSKQSNLAGYRAGFVAG---DPALVAELLEV----RKHAGMMVPAPVQAAMVAALGDDAHVRE 276 (364)
T ss_pred CccceEEEEeechhccCCCceeeEEEec---CHHHHHHHHHH----HHhcCCCcCHHHHHHHHHHhCCHHHHHH
Confidence 235899999999999999999999874 56666665542 2222235788999999999997554433
No 71
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-37 Score=299.51 Aligned_cols=254 Identities=16% Similarity=0.139 Sum_probs=195.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
++.++|+.|.+. ..+++.+.++++++......+|.|..|.++||+++++|+....+..+++++ +++|+|++++
T Consensus 33 ~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~--i~~t~G~~~a 105 (391)
T PRK08361 33 ENVISLGIGEPD-----FDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDVDN--VIVTAGAYEA 105 (391)
T ss_pred cCeEEcCCCCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCccc--EEEeCChHHH
Confidence 468999999653 334567777776642223457988999999999999998543332355555 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+.. |||+|++++|+|+.|...++..|.+++.+|+..+.++.+|++.+++.+.. ..++++ +++||||||
T Consensus 106 l~~~~~~l~~--~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~--~~~~v~-i~~p~NPtG 180 (391)
T PRK08361 106 TYLAFESLLE--EGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITK--RTRMIV-INYPNNPTG 180 (391)
T ss_pred HHHHHHHhcC--CCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhccc--ccEEEE-EeCCCCCCC
Confidence 9998887766 89999999999999999999999999999985444678999999988763 334444 478999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|+++|++++++||+||+|.+|.+++. ...++..+ ..+++++++||||.||++|+|+||+++ ++
T Consensus 181 ~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~--~~~~~~~~--~~~~~i~~~s~SK~~~~~GlRiG~~~~---~~ 253 (391)
T PRK08361 181 ATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGA--KHYPMIKY--APDNTILANSFSKTFAMTGWRLGFVIA---PE 253 (391)
T ss_pred cCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCC--CCCCHhhc--CCCCEEEEecCchhcCCcHhhhhhhcc---CH
Confidence 999999999999999999999999999999875311 11122222 235799999999999999999999986 35
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
+.++++.. .......+++.+.|.++..+|++++
T Consensus 254 ~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~ 286 (391)
T PRK08361 254 QVIKDMIK----LHAYIIGNVASFVQIAGIEALRSKE 286 (391)
T ss_pred HHHHHHHH----HHhhhccCCChHHHHHHHHHhcCCc
Confidence 55555432 2222334678899999999998753
No 72
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-36 Score=289.22 Aligned_cols=258 Identities=17% Similarity=0.189 Sum_probs=190.5
Q ss_pred hhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC
Q 047180 38 ILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK 117 (337)
Q Consensus 38 ~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~ 117 (337)
+..+.+.+.. ...++++|+.|++. ..+++.+.+++++... ...+|+ ..|.++||+++++|+ + ++++
T Consensus 18 ~~~~~~~~~~-~~~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~-~~~~Y~-~~~~~~lr~~ia~~~-~-----~~~~ 83 (357)
T PRK14809 18 IEEVARELGL-DPDDLVKLSSNENP-----HGPSPAAVEAIREAAE-RVHSYP-KASHADLTAALADRW-D-----VSPE 83 (357)
T ss_pred HHHHHHHhCC-CccceeEecCCCCC-----CCCCHHHHHHHHHHHh-hhhcCC-CCCHHHHHHHHHHHh-C-----CCcc
Confidence 3344444322 23469999998642 3355666666654312 246785 478999999999997 2 3455
Q ss_pred ceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCe
Q 047180 118 RIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGS 197 (337)
Q Consensus 118 ~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 197 (337)
+ +++|+|+++++.++++++.+ |||+|++++|+|+.|...++..|++++.+|+..++++.+|.+.+.+... ..+
T Consensus 84 ~--I~it~G~~~al~~~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~---~~k 156 (357)
T PRK14809 84 Q--VWLANGGDGALDYLARAMLD--PGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD---GER 156 (357)
T ss_pred e--EEECCCHHHHHHHHHHHhcC--CCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc---CCc
Confidence 5 57999999999999888766 9999999999999999999999999999998443457778777766542 234
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc
Q 047180 198 FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG 277 (337)
Q Consensus 198 ~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 277 (337)
++++ ||||||||.++|.+++++|+++|++ +++||+||+|.+|.++ . .... .....+++++++||||.||+||
T Consensus 157 ~i~l-~~p~NPTG~~~s~~~~~~l~~~~~~-~~~iI~De~y~~~~~~---~--~~~~-~~~~~~~vi~~~SfSK~~~~~G 228 (357)
T PRK14809 157 IVYL-TSPHNPTGSEIPLDEVEALAERTDE-ETLVVVDEAYGEFAER---P--SAVA-LVEERDDVAVLRTFSKAYGLAG 228 (357)
T ss_pred EEEE-eCCCCCCCcCCCHHHHHHHHHhCcc-CcEEEEechhhhccCC---c--hhHH-HHhhCCCEEEEecchhHhcCcc
Confidence 5555 7999999999999999999999975 7899999999999742 1 1122 2233468999999999999999
Q ss_pred cccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 278 QRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 278 ~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
||+||+++ ++++++++.. . ...+ +++.++|.++..+|.++++.++.+
T Consensus 229 lRiG~~~~---~~~~~~~~~~----~-~~~~-~~~~~~~~~a~~~l~~~~~~~~~~ 275 (357)
T PRK14809 229 LRLGYAVV---PEEWADAYAR----V-NTPF-AASELACRAGLAALDDDEHVERTV 275 (357)
T ss_pred hhheeeec---CHHHHHHHHH----h-CCCC-CCCHHHHHHHHHHhCCHHHHHHHH
Confidence 99999986 3555555443 2 2234 478899999999998765444433
No 73
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=5.9e-37 Score=300.84 Aligned_cols=217 Identities=14% Similarity=0.042 Sum_probs=159.0
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhC-CC-CcccccCceeEEeeccchh
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYG-DN-SEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~-~~-~~~~~~~~i~~~~t~g~~~ 129 (337)
+.|+|++|.+. ..+++.+.++.+.+. + . .|+++.|..++|+++++++.+ .. .....++..++++|.|+++
T Consensus 95 ~~i~l~~g~p~-----~~~~~~~~~~~~~~~-~-~-~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~ 166 (521)
T TIGR03801 95 DIISYVIDQLG-----FDPDAFLYEMCDGII-G-D-NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTA 166 (521)
T ss_pred HHHhhcCCCCC-----CCCCHHHHHHHHHhh-c-C-CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHH
Confidence 57999999763 333445555555432 1 1 587778888888888864433 22 2112223224689999999
Q ss_pred HHHHHHHHHh---hhCCCCeEEEcCCCCcchHHHHHhc--CceeeEeeeccCCC-----CCCChHHHHHHHHcCCCCeEE
Q 047180 130 ACRLFADFQK---RFHPDSQIYIPVPTWSNHHNIWRDA--HVTQRTFHYYHPGT-----KGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 130 al~~~~~~l~---~~~pgd~Vlv~~P~y~~y~~~~~~~--G~~~~~~~~~~~~~-----~~~d~~~l~~~l~~~~~~~~i 199 (337)
|+.+++..+. -..|||+|++++|+|+.|..+++.. |.+++++++...++ |.+|++++++... ++.+++
T Consensus 167 al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~--~~~kai 244 (521)
T TIGR03801 167 AMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRD--PSIKAL 244 (521)
T ss_pred HHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcC--CCCcEE
Confidence 9999886531 1239999999999999999998876 67788887743222 8899999987654 233455
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAK--GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG 277 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~--~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 277 (337)
++ ||||||||.++|++++++|+++|++| +++||+||+|.+|.+. + .++... ..+++|+++||||.||++|
T Consensus 245 ~l-~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~-~----~sl~~~--~~~~vI~v~SfSK~fg~~G 316 (521)
T TIGR03801 245 FV-VNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD-F----RSLFAE--LPYNTIGVYSFSKYFGATG 316 (521)
T ss_pred EE-eCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc-c----cchhhh--CCCCEEEEEcchhhccCch
Confidence 54 78999999999999999999999986 9999999999998742 1 122111 2358999999999999999
Q ss_pred cccceeEee
Q 047180 278 QRVGCLSVL 286 (337)
Q Consensus 278 ~RvG~~~~~ 286 (337)
||+||++++
T Consensus 317 ~RlG~i~~~ 325 (521)
T TIGR03801 317 WRLGTIALH 325 (521)
T ss_pred hhhhhhhcC
Confidence 999999863
No 74
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.7e-36 Score=288.25 Aligned_cols=246 Identities=15% Similarity=0.197 Sum_probs=184.7
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.+.+||+.|.+. ..+++.+.+++.+.. .....|++ .|.++||+++++|+ + +++++ +++|+|++++
T Consensus 19 ~~~~~l~~~~~~-----~~~p~~~~~a~~~~~-~~~~~Y~~-~~~~~lr~~ia~~~-~-----~~~~~--i~it~Ga~~~ 83 (354)
T PRK06358 19 NMILDFSANINP-----LGVPESLKQAITENL-DKLVEYPD-PDYLELRKRIASFE-Q-----LDLEN--VILGNGATEL 83 (354)
T ss_pred cceEEecCCCCC-----CCCCHHHHHHHHHHH-HhhhcCCC-ccHHHHHHHHHHHh-C-----CChhh--EEECCCHHHH
Confidence 457999998642 123566777766531 22456855 57899999999997 2 34565 5799999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++.++ . + ++|++++|+|+.|...++..|++++.+++..++++.+| +.+.+.+.. ..+++++ ||||||||
T Consensus 84 l~~~~~~~-~--~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~--~~~~v~~-~~P~NPtG 155 (354)
T PRK06358 84 IFNIVKVT-K--P-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKE--EIDLVFL-CNPNNPTG 155 (354)
T ss_pred HHHHHHHh-C--C-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhcc--CCCEEEE-eCCCCCCC
Confidence 99988775 2 4 68999999999999999999999999998444457888 666665532 2344444 79999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|+++|++++++||+||+|.+|.+++ ....... ..+..+++|+++||||.||+||+|+||+++ +++
T Consensus 156 ~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~--~~~~~~~-~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~--~~~ 230 (354)
T PRK06358 156 QLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEEN--ETISMIN-YLENFKNLIIIRAFTKFFAIPGLRLGYGLT--SNK 230 (354)
T ss_pred CccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCc--cchhHHH-hccCCCCEEEEEechhhccCcchhheeeec--CCH
Confidence 99999999999999999999999999999997542 1111122 223346899999999999999999999976 455
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKK 330 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 330 (337)
.+++.+.. +. ..| +.+.++|.++..+|+++++.+
T Consensus 231 ~~~~~~~~----~~-~~~-~~~~~~q~~~~~~l~~~~~~~ 264 (354)
T PRK06358 231 NLAEKLLQ----MR-EPW-SINTFADLAGQTLLDDKEYIK 264 (354)
T ss_pred HHHHHHHH----hC-CCC-cchHHHHHHHHHHhccHHHHH
Confidence 55555443 22 234 578899999999998765433
No 75
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=9.9e-37 Score=295.78 Aligned_cols=259 Identities=17% Similarity=0.144 Sum_probs=184.3
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cC----cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEee
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AG----TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQS 124 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~----~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 124 (337)
++++|+|+.|.+. ..+.+.+.++++++.+ .. .....|++..|.++||++|++|+.++++..+++++ +++|
T Consensus 29 ~~~~i~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~--I~it 103 (416)
T PRK09440 29 TPGAIMLGGGNPA---HIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQN--IALT 103 (416)
T ss_pred CCCceeccCCCCC---ccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhh--EEEc
Confidence 3578999999653 1223334567776654 22 22357999999999999999999655444466666 5799
Q ss_pred ccchhHHHHHHHHHhhh---CCCCeEEE-cCCCCcchHHHHHhcCc----eeeEeeeccCC--CCCCChHHHHHHHHcCC
Q 047180 125 LSGTGACRLFADFQKRF---HPDSQIYI-PVPTWSNHHNIWRDAHV----TQRTFHYYHPG--TKGLDFAALMDDIKNAP 194 (337)
Q Consensus 125 ~g~~~al~~~~~~l~~~---~pgd~Vlv-~~P~y~~y~~~~~~~G~----~~~~~~~~~~~--~~~~d~~~l~~~l~~~~ 194 (337)
+|+++++.+++.++... .+||.|++ ++|+|+.|...++..|. .+..+++ +.+ ++++|++.++ +. +
T Consensus 104 ~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~l~--~~--~ 178 (416)
T PRK09440 104 NGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELL-PEGQFKYHVDFEHLH--ID--E 178 (416)
T ss_pred cChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccc-cccccccCCCHHHcc--cC--C
Confidence 99999999999887631 25899999 79999999986654442 1122233 222 3688998886 22 2
Q ss_pred CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 195 NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
+..++++||||||||.++|.+++++|+++|++++++||+||+|.++... . ...... ....+++|+++||||+ +
T Consensus 179 -~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~-~--~~~~~~--~~~~~~vI~~~SfSK~-~ 251 (416)
T PRK09440 179 -DTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPG-I--IFSEAT--PLWNPNIILCMSLSKL-G 251 (416)
T ss_pred -CceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCC-c--chhhcC--ccccCCeEEEeccccc-C
Confidence 3345555899999999999999999999999999999999999865321 1 000110 0113689999999995 9
Q ss_pred ccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHH
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLW 332 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w 332 (337)
+||+|+||+++ ++++++++.. .......+++.++|.++..+|+++++.+.+
T Consensus 252 ~pGlRiG~~i~---~~~l~~~~~~----~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~ 302 (416)
T PRK09440 252 LPGVRCGIVIA---DEEIIEALSN----MNGIISLAPGRLGPAIAAEMIESGDLLRLS 302 (416)
T ss_pred CCcceEEEEeC---CHHHHHHHHH----HHHHhccCCCcHHHHHHHHHhccchHHHHH
Confidence 99999999985 4666665544 222233467899999999999987754433
No 76
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-36 Score=288.98 Aligned_cols=245 Identities=16% Similarity=0.114 Sum_probs=189.4
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-c--CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-A--GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
..++|+.|++. ..+++.+.+++.+. . ......|+ ..|.++||+++++|+.+.++..+++++ +++|+|++
T Consensus 27 ~~i~l~~~~~~-----~~~~~~~~~al~~~l~~~~~~~~~Y~-~~g~~~lr~aia~~~~~~~~~~~~~~~--I~it~G~~ 98 (368)
T PRK03317 27 VPVRLNTNENP-----YPPSPALVADIAEAVAEAAAGLNRYP-DRDAVALRADLAAYLTAQTGVGLTVEN--VWAANGSN 98 (368)
T ss_pred ceeEecCCCCC-----CCCCHHHHHHHHHHHhhhhhhhccCC-CCchHHHHHHHHHHhhhhccCCCChhh--EEECCCHH
Confidence 56999998642 34567777777653 2 12356785 469999999999999766555566666 57999999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.++++++.+ |||.|++++|+|+.|...++..|.+++.++.. +++++|++.+++++... +.++++ +||||||
T Consensus 99 ~~l~~~~~~~~~--~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~-~~~~i~-l~~p~NP 172 (368)
T PRK03317 99 EILQQLLQAFGG--PGRTALGFVPSYSMHPIIARGTHTEWVEGPRA--ADFTLDVDAAVAAIAEH-RPDVVF-LTSPNNP 172 (368)
T ss_pred HHHHHHHHHhcC--CCCEEEEeCCChHHHHHHHHhcCCeeEEcccC--CCCCCCHHHHHHHHhcc-CCCEEE-EeCCCCC
Confidence 999999988876 99999999999999999999999999988762 35899999999988642 234554 4799999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++| +++||+||+|.+|.+.. ...... +....+++++++||||.||++|+|+||+++
T Consensus 173 tG~~~~~~~l~~l~~~~---~~~lI~DE~y~~~~~~~---~~~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~--- 242 (368)
T PRK03317 173 TGTALPLDDVEAILDAA---PGIVVVDEAYAEFRRSG---TPSALT-LLPEYPRLVVSRTMSKAFAFAGGRLGYLAA--- 242 (368)
T ss_pred CCCCCCHHHHHHHHHHC---CceEEEeCCchhhcccC---CcCHHH-HHHhCCCEEEEEechhhhccchhhhhhhhC---
Confidence 99999999999998887 69999999999986431 111122 223345899999999999999999999985
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++++++.+.. . +..| +.+.++|.++..+|++.
T Consensus 243 ~~~~~~~l~~----~-~~~~-~~s~~~~~a~~~~l~~~ 274 (368)
T PRK03317 243 APAVVDALRL----V-RLPY-HLSAVTQAAARAALRHA 274 (368)
T ss_pred CHHHHHHHHh----c-CCCC-CCCHHHHHHHHHHhhCH
Confidence 5666555542 2 2334 57889999999999874
No 77
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-35 Score=285.52 Aligned_cols=262 Identities=17% Similarity=0.171 Sum_probs=198.3
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cC--cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AG--TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
+++++|+.|.+ .+.+++.+.+++... .. .....|.+..|.+++|+++++|+...+...+++++ +++|+|+
T Consensus 33 ~~~~~l~~g~p-----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~--i~~t~G~ 105 (394)
T PRK06836 33 DNVFDFSLGNP-----SVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADH--IVMTCGA 105 (394)
T ss_pred CCeEEecCcCC-----CCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCc--EEEeCCh
Confidence 46899999853 233567788877654 21 22568989999999999999998655444455665 5789999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
++++..+++.+.. +||+|++++|+|+.|..+++..|.+++.+++. ++++++|++++++.+.. +.+++++ ++|||
T Consensus 106 ~~al~~~~~~l~~--~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~~~~--~~~~v~~-~~p~N 179 (394)
T PRK06836 106 AGALNVALKAILN--PGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTD-TDTFQPDLDALEAAITP--KTKAVII-NSPNN 179 (394)
T ss_pred HHHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHcCCEEEEEecC-CccCcCCHHHHHhhcCc--CceEEEE-eCCCC
Confidence 9999998887765 99999999999999999999999999999984 43578999999998853 3345554 78999
Q ss_pred CCCCCCCHHHHHHHHHHHHh------cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccc
Q 047180 208 PTGVDPSEEQWKEISYQIKA------KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVG 281 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~------~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 281 (337)
|||.+++.+++++|+++|++ |+++||+||+|.+|.++. ....+ +.+..+++++++||||.||+||+|+|
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~--~~~~~---~~~~~~~~i~~~S~SK~~~~pGlRiG 254 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDG--AEVPY---IFKYYDNSIVVYSFSKSLSLPGERIG 254 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCC--CCCCC---hHHccCcEEEEecchhhccCcceeeE
Confidence 99999999999999999999 899999999999997531 11111 12224589999999999999999999
Q ss_pred eeEeeeCCHHHH--HHHHHHHHhhhcc-cccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 282 CLSVLCEDEKQA--VAVKSQLQQLARP-MYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 282 ~~~~~~~~~~~~--~~~~~~l~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
|++++ ++.. +.++..+....+. .+.+++.+.|.++..+++++....+|+
T Consensus 255 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 306 (394)
T PRK06836 255 YIAVN---PEMEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDATVDVSIYK 306 (394)
T ss_pred EEecC---HHHhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCChHHHHHHH
Confidence 99863 3221 2233333332232 234678889999999998854444443
No 78
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-36 Score=286.64 Aligned_cols=252 Identities=19% Similarity=0.205 Sum_probs=191.9
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
.+++|+|+.|.+. ..+++.+.+++.+... ....|++..| .+||+++++++ + .++++ +++|+|+++
T Consensus 35 ~~~~i~l~~~~~~-----~~~~~~~~~al~~~~~-~~~~Y~~~~g-~~lr~~ia~~~-~-----~~~~~--i~~t~G~~~ 99 (371)
T PRK05166 35 VPRIAKLGSNENP-----LGPSPAVRRAFADIAE-LLRLYPDPQG-RALREAIAART-G-----VPADR--IILGNGSED 99 (371)
T ss_pred CcceEEcCCCCCC-----CCCCHHHHHHHHHHHH-HhhcCCCCcH-HHHHHHHHHHh-C-----cCHHH--EEEcCCHHH
Confidence 3578999998642 2356677777665422 2457998888 48999999986 2 23444 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++..+.+ +||+|++++|+|+.|...++..|++++.+++. + ++++|++++++.+.. ..++++ +|||||||
T Consensus 100 ~l~~~~~~~~~--~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~~~~l~~~~~~--~~~~v~-l~~p~NPt 172 (371)
T PRK05166 100 LIAVICRAVLR--PGDRVVTLYPSFPLHEDYPTMMGARVERVTVT-P-DLGFDLDALCAAVAR--APRMLM-FSNPSNPV 172 (371)
T ss_pred HHHHHHHHhcC--CCCEEEEcCCChHHHHHHHHHcCCeEEEeecC-C-CCCCCHHHHHHhhhc--CCCEEE-EeCCCCCC
Confidence 99998887765 99999999999999999999999999999883 2 478999999988763 234554 49999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|+++|++ +++||+||+|.+|.++. ........+.+..+++|+++||||.||++|+|+||+++ ++
T Consensus 173 G~~~~~~~~~~l~~~~~~-~~~ii~De~y~~~~~~~--~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~--~~ 247 (371)
T PRK05166 173 GSWLTADQLARVLDATPP-ETLIVVDEAYAEYAAGD--DYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLV--SD 247 (371)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEECcHHHhcCCc--CcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeec--CC
Confidence 999999999999999864 88999999999998532 11112222223345899999999999999999999875 46
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
+++++.+.. + ...+ +++.+.|.++..+|.+.++.++.++
T Consensus 248 ~~l~~~~~~----~-~~~~-~~~~~~q~~~~~~l~~~~~~~~~~~ 286 (371)
T PRK05166 248 PELVGLLDR----V-RTPF-NVNGAAQAAALAALDDEEHLAKGVA 286 (371)
T ss_pred HHHHHHHHH----h-ccCC-CCCHHHHHHHHHHhcCHHHHHHHHH
Confidence 666555542 2 2233 5788999999999987665555443
No 79
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=5.7e-36 Score=284.90 Aligned_cols=255 Identities=16% Similarity=0.107 Sum_probs=186.7
Q ss_pred hhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcc-ccc
Q 047180 38 ILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEF-IKD 116 (337)
Q Consensus 38 ~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~-~~~ 116 (337)
+.+...+.++. ....++|+.|.+. .++++.+.++++++. ....|++..|.++||+++++|+..+++.. +++
T Consensus 9 ~~~~~~~~~~~-~~~~i~l~~~~p~-----~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~ 80 (357)
T TIGR03539 9 LAPYKAKAASH-PDGIVDLSVGTPV-----DPVPPLIRAALAAAA--DAPGYPQTWGTPELREAIVDWLERRRGVPGLDP 80 (357)
T ss_pred HHHHHHHhhhC-CCCeEEccCCCCC-----CCCCHHHHHHHHHHH--hhCCCCcccCCHHHHHHHHHHHHHhcCCCCCCc
Confidence 34444444332 3568999998642 334566777766542 24579999999999999999996664443 566
Q ss_pred CceeEEeeccchhHHHHHHHHH-hhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC
Q 047180 117 KRIAAVQSLSGTGACRLFADFQ-KRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN 195 (337)
Q Consensus 117 ~~i~~~~t~g~~~al~~~~~~l-~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 195 (337)
++ +++|+|+++++.+++.++ .. |||.|++++|+|+.|...++..|++++.++ |++.+. . .+
T Consensus 81 ~~--I~it~G~~~~i~~~~~~l~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~----~-~~ 142 (357)
T TIGR03539 81 TA--VLPVIGTKELVAWLPTLLGLG--PGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD----P-VG 142 (357)
T ss_pred Ce--EEEccChHHHHHHHHHHHcCC--CCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC----c-cC
Confidence 65 579999999999987766 45 899999999999999999999999988763 122221 1 12
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh-----hcCCeEEEEeccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL-----KDGHLLGLAQSYA 270 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~S~S 270 (337)
.+++++ ++||||||.++|.+++++|+++|+++|++||+||+|.+|.+++ .. ...+. ....++++++|||
T Consensus 143 ~~~v~~-~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~--~~~~~~~~~~~~~~~vi~~~S~S 216 (357)
T TIGR03539 143 PDLIWL-NSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEG---RP--VSILDPRVCGGDHTGLLAVHSLS 216 (357)
T ss_pred ccEEEE-eCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCC---CC--ccceecccCCCccccEEEEeccc
Confidence 344454 7899999999999999999999999999999999999887532 11 11121 1235799999999
Q ss_pred ccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHH
Q 047180 271 KNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKL 331 (337)
Q Consensus 271 K~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 331 (337)
|.|+++|+|+||+++ ++++++++.. .......+++.++|.++..+|++....++
T Consensus 217 K~~~~~G~R~G~~i~---~~~~~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 270 (357)
T TIGR03539 217 KRSNLAGYRAGFVAG---DPALVAELLT----VRKHAGLMVPAPVQAAMVAALGDDGHVAE 270 (357)
T ss_pred cccCCCceeEEEEec---CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHcCCHHHHHH
Confidence 999999999999974 4666665543 22222345788999999999987544333
No 80
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=3.2e-36 Score=287.94 Aligned_cols=281 Identities=16% Similarity=0.138 Sum_probs=202.5
Q ss_pred hhhhhhccccccccccc--cccccccCCCCCCCchhhHHHHHhcCC-CCCeeEeeeeeeecCCCCcccchHHHHHHHHhc
Q 047180 6 LISERVSCRSSVLGARW--MSSWWRNVEPAAKDPILGVTEAFLADP-SPDKVNVGVGAYRDDNGKPVVLECVREAERRIA 82 (337)
Q Consensus 6 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~ 82 (337)
++|+|-=-|-.++|+-- +|++.+.-.+.+ .+. ..+ .++.++|+.|++. ..+++.+.+++.+..
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--------~~~~~~~~i~l~~~~~~-----~~~~~~~~~a~~~~~ 69 (370)
T PRK09105 4 ALSRRSFLRLAALGAAAAALGLLAAAAAAAK-RAA--------APPAAEGAVFLNANECP-----LGPSPAARDAAARSA 69 (370)
T ss_pred chhHHHHHHHHHHHHhhhhcccccccccccc-CcC--------CCCCCCCcEEecCCCCC-----CCCCHHHHHHHHHHH
Confidence 56777777777777433 334433222211 111 112 3578999998632 335666777665431
Q ss_pred CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH
Q 047180 83 GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR 162 (337)
Q Consensus 83 ~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~ 162 (337)
. ....|++. +.++||++|++++ + +++++ +++|+|+++++.+++..+.+ +||+|++++|+|+.|...++
T Consensus 70 ~-~~~~Y~~~-~~~~Lr~aia~~~-~-----v~~e~--I~it~Gs~~ai~~~~~~l~~--~gd~Vli~~P~y~~~~~~~~ 137 (370)
T PRK09105 70 A-LSGRYDLE-LEDDLRTLFAAQE-G-----LPADH--VMAYAGSSEPLNYAVLAFTS--PTAGLVTADPTYEAGWRAAD 137 (370)
T ss_pred H-HhcCCCCc-hHHHHHHHHHHHh-C-----cChhh--EEEcCChHHHHHHHHHHHcC--CCCEEEEeCCChHHHHHHHH
Confidence 1 12358654 4899999999976 2 23555 57899999999999988766 89999999999999999999
Q ss_pred hcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 163 DAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 163 ~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
..|++++.+|+. + ++.+|++.+++. . ++.++ +++||||||||.+++.+++++|++.+ +++++||+||+|.+|.
T Consensus 138 ~~g~~~~~v~~~-~-~~~~d~~~l~~~-~--~~~~~-v~l~nP~NPTG~~~~~~~l~~l~~~~-~~~~~lIvDEaY~~f~ 210 (370)
T PRK09105 138 AQGAPVAKVPLR-A-DGAHDVKAMLAA-D--PNAGL-IYICNPNNPTGTVTPRADIEWLLANK-PAGSVLLVDEAYIHFS 210 (370)
T ss_pred HcCCeEEEecCC-C-CCCCCHHHHHhc-C--CCCCE-EEEeCCCCCCCcCcCHHHHHHHHHhC-CCCcEEEEECchHHhc
Confidence 999999999983 3 578999998765 2 23344 44589999999999999999999975 4699999999998875
Q ss_pred CCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHH
Q 047180 243 SGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTI 322 (337)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~ 322 (337)
.. . +...+....+++++++||||.||++|||+||+++ ++++++++.. . .+.+++.++|.++..+
T Consensus 211 ~~---~---s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~---~~~~i~~l~~----~---~~~~~~~~~~~aa~~~ 274 (370)
T PRK09105 211 DA---P---SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAA---RPDLLAKLAR----F---GHNPLPVPAAAAGLAS 274 (370)
T ss_pred cC---c---chHHHHhhCCCEEEEecccHhhcCCccceeeeec---CHHHHHHHHh----c---CCCCcCHHHHHHHHHH
Confidence 31 1 1222333457899999999999999999999985 4555555433 2 2334788899999999
Q ss_pred hCCHHHHHHHHhh
Q 047180 323 LGDAELKKLWLKE 335 (337)
Q Consensus 323 l~~~~~~~~w~~e 335 (337)
|.++++.++++++
T Consensus 275 L~~~~~~~~~~~~ 287 (370)
T PRK09105 275 LRDPKLVPQRRAE 287 (370)
T ss_pred HhCHHHHHHHHHH
Confidence 9987665555544
No 81
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=9.6e-36 Score=283.65 Aligned_cols=242 Identities=15% Similarity=0.085 Sum_probs=174.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.+.|+|+.|++ + ..+++.+.+++.+... ....|++. +.++||+++|+|+ + +++++ +++|+|++++
T Consensus 22 ~~~i~l~~~~n----~-~~~~~~~~~a~~~~~~-~~~~Y~~~-~~~~Lr~aia~~~-~-----v~~~~--I~it~G~~~~ 86 (360)
T PRK07392 22 DAILDFSASIN----P-LGPPESVIAAIQSALS-ALRHYPDP-DYRELRLALAQHH-Q-----LPPEW--ILPGNGAAEL 86 (360)
T ss_pred ccEEEeCCcCC----C-CCCCHHHHHHHHHHHH-HhhcCCCc-CHHHHHHHHHHHh-C-----cChhh--EEECCCHHHH
Confidence 46799998853 2 3356677777655312 25679765 4689999999998 2 34555 5799999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCC---CCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTK---GLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~---~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
+.++++++. +||+|++++|+|+.|...++..|++++++|+..+..+ ..+++.+++.. +. +.++++|||||
T Consensus 87 i~~~~~~l~---~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~l~nP~N 159 (360)
T PRK07392 87 LTWAGRELA---QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL---TP-NDGLLLNNPHN 159 (360)
T ss_pred HHHHHHHhC---CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc---cC-CCEEEEeCCCC
Confidence 999887764 6899999999999999999999999999998433222 23555554432 23 34555589999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
|||.+++++++.+| ++++++ +|+||+|.+|.+++ ...+........+++|+++||||.||+||+|+||+++
T Consensus 160 PTG~~~~~~~l~~l---~~~~~~-~IiDE~y~~~~~~~---~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~-- 230 (360)
T PRK07392 160 PTGKLWSREAILPL---LEQFAL-VVVDEAFMDFLPPD---AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIA-- 230 (360)
T ss_pred CCCCCcCHHHHHHH---HHHCCE-EEEECchhhhccCc---cccchHHHhhcCCCEEEEEechhhhcCCchheeeeeC--
Confidence 99999998776555 557775 56699999997531 1112211223346899999999999999999999986
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHH
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKK 330 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 330 (337)
++++++++. .. +..| +++.++|.++..+|+++++.+
T Consensus 231 -~~~~~~~~~----~~-~~~~-~~s~~~q~~~~~~l~~~~~~~ 266 (360)
T PRK07392 231 -HPDRLQRWQ----QW-RDPW-PVNGLAAAAAIAALADRDFQQ 266 (360)
T ss_pred -CHHHHHHHH----hh-CCCC-CCCHHHHHHHHHHhccHHHHH
Confidence 355555543 22 2234 578999999999999866544
No 82
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-35 Score=283.00 Aligned_cols=246 Identities=15% Similarity=0.178 Sum_probs=188.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.++++|+.|.+. ..+++.+.+++.+... ...|.|..|.++||+++++|+ + .++++ +++|+|++++
T Consensus 29 ~~~i~l~~n~~~-----~~~~~~v~~a~~~~~~--~~~~~p~~g~~~lr~~ia~~~-~-----~~~~~--i~~t~G~~~~ 93 (359)
T PRK03158 29 EKIVKLASNENP-----YGPSPKVKEAIAAHLD--ELALYPDGYAPELRTKVAKHL-G-----VDEEQ--LLFGAGLDEV 93 (359)
T ss_pred CceEEecCCCCC-----CCCCHHHHHHHHHHHH--HhhcCCCCcHHHHHHHHHHHh-C-----CCHHH--EEECCCHHHH
Confidence 368999998643 2346677777655311 135667789999999999997 2 23444 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+.+ +||+|++++|+|+.|...++..|++++.+|+. ++++|++.+++.+.. +.+++++ ||||||||
T Consensus 94 l~~~~~~~~~--~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~--~~~~v~i-~~p~NPtG 165 (359)
T PRK03158 94 IQMISRALLN--PGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDE--QTKIVWI-CNPNNPTG 165 (359)
T ss_pred HHHHHHHHhC--CCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCC--CCCEEEE-eCCCCCCC
Confidence 9988877766 89999999999999999999999999999984 468999999887752 3345544 89999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.++++++++.|+ ++++||+||+|.+|.+++. ....+..+ ...+++++++||||.||++|+|+||+++ ++
T Consensus 166 ~~~~~~~l~~~~~~~~-~~~~ii~De~y~~~~~~~~--~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~~ 238 (359)
T PRK03158 166 TYVNHEELLSFLESVP-SHVLVVLDEAYYEYVTAED--YPDTLPLL-EKYENLIVLRTFSKAYGLAALRVGYGIA---SE 238 (359)
T ss_pred CCCCHHHHHHHHHhCC-CCcEEEEECchHhhcCCcc--cccHHHHH-HhcCCEEEEEechHhhcCcchhhehhcC---CH
Confidence 9999999999998874 6999999999999875321 11122222 3346899999999999999999999985 45
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLW 332 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w 332 (337)
++++++.. .. ..| +++.++|.++..+|+++++.++.
T Consensus 239 ~~~~~~~~----~~-~~~-~~~~~~q~~~~~~l~~~~~~~~~ 274 (359)
T PRK03158 239 ELIEKLNI----AR-PPF-NTTRIAQYAAIAALEDQAFLKEC 274 (359)
T ss_pred HHHHHHHH----hc-CCC-CCCHHHHHHHHHHhcCHHHHHHH
Confidence 65555543 22 234 57899999999999986654443
No 83
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.9e-35 Score=279.31 Aligned_cols=241 Identities=19% Similarity=0.229 Sum_probs=190.2
Q ss_pred CCeeEeeeeeeecCCCCcc-cchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPV-VLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
+++++|+..+ +|+ +++.+.+++++... ..+.|++. ...++++++++++-. .++++ +++++|+++
T Consensus 22 ~~~i~LssNe------nP~gp~~~~~~~~~~~~~-~~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~--V~~gnGsde 86 (356)
T COG0079 22 PGIIKLSSNE------NPYGPPPKVIEAIRAALD-KLNRYPDP-DYRELRAALAEYYGV-----VDPEN--VLVGNGSDE 86 (356)
T ss_pred ccceeecCCC------CCCCCCHHHHHHHHHHHH-hhccCCCC-cHHHHHHHHHHHhCC-----CCcce--EEEcCChHH
Confidence 3588898854 343 34666666555311 35678655 788999999998732 22344 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
.|.++++++.. |||+|+++.|+|+.|...++..|++++.+|+. + |.+|++.+.+.+.+ +.+++++ |||||||
T Consensus 87 ~i~~l~~~~~~--~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~-~--~~~d~~~~~~~~~~--~~~lv~i-~nPNNPT 158 (356)
T COG0079 87 LIELLVRAFVE--PGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLK-E--FRLDLDAILAAIRD--KTKLVFL-CNPNNPT 158 (356)
T ss_pred HHHHHHHHhhc--CCCEEEEcCCChHHHHHHHHhcCCeEEEeccc-c--cccCHHHHHHhhhc--CCCEEEE-eCCCCCC
Confidence 99999998887 99999999999999999999999999999973 2 88999999988864 2345554 9999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|..++.++++++++.+.+ +.+||.||+|.+|.. ++ .+. +....+|+++++||||+||++|+|+||+++ +
T Consensus 159 G~~~~~~~l~~l~~~~~~-~~~vVvDEAY~eF~~----~~--~~~-l~~~~~nlivlRTfSKa~gLAGlRlGy~ia---~ 227 (356)
T COG0079 159 GTLLPREELRALLEALPE-GGLVVIDEAYIEFSP----ES--SLE-LLKYPPNLIVLRTFSKAFGLAGLRVGYAIA---N 227 (356)
T ss_pred CCCCCHHHHHHHHHhCCC-CcEEEEeCchhhcCC----ch--hhh-hccCCCCEEEEEecHHhhhcchhceeeccC---C
Confidence 999999999999999988 999999999999963 11 122 222456799999999999999999999764 7
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHH
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKL 331 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 331 (337)
+++++.+.. .+..|+ .+.++|.++..+|++.++.++
T Consensus 228 ~~~i~~l~~-----vr~p~~-v~~~a~~aa~aal~~~~~~~~ 263 (356)
T COG0079 228 PELIAALNK-----VRPPFN-VSSPALAAAIAALRDADYLEE 263 (356)
T ss_pred HHHHHHHHH-----hcCCCC-CCHHHHHHHHHHcccHHHHHH
Confidence 777666544 456774 789999999999998765443
No 84
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=3.8e-35 Score=279.13 Aligned_cols=247 Identities=14% Similarity=0.154 Sum_probs=182.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.+.++|++|+++ ..+++.+.+++.+.... ...|++ .+.++||+++|+++ + +++++ +++|+|++++
T Consensus 20 ~~~i~l~~~~~~-----~~~p~~~~~a~~~~~~~-~~~y~~-~~~~~lr~~ia~~~-~-----~~~~~--i~it~Ga~~~ 84 (356)
T PRK08056 20 DQLLDFSANINP-----LGMPVSLKRAIIDNLDC-AERYPD-VEYRHLHQALARHH-Q-----VPASW--ILAGNGETES 84 (356)
T ss_pred hhEEEeccccCC-----CCCCHHHHHHHHHHHHh-cccCcC-ccHHHHHHHHHHHh-C-----cChhh--EEECCCHHHH
Confidence 468999998642 34566777776553111 235765 57899999999997 2 33455 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++.++ . +|+ +++++|+|+.|..+++..|++++.+|+..++++.+| +.+++.+. ++.++++ +||||||||
T Consensus 85 l~~~~~~l-~--~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~--~~~k~v~-l~~p~NPTG 156 (356)
T PRK08056 85 IFAVVSGL-K--PRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALT--PDLDCLF-LCTPNNPTG 156 (356)
T ss_pred HHHHHHHh-C--CCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhcc--CCCCEEE-EeCCcCCCC
Confidence 99988776 3 775 788899999999999999999999998544445666 34555553 2334555 589999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++++++++|+++|++++++||+||+|.+|.++. ...+..+ ...+++++++||||+||++|+|+||+++ +++
T Consensus 157 ~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~-~~~~~~i~~~S~SK~~~~~G~RiG~~v~--~~~ 229 (356)
T PRK08056 157 LLPERQLLQAIAERCKSLNIALILDEAFIDFIPDE----TGFIPQL-ADNPHLWVLRSLTKFYAIPGLRLGYLVN--SDD 229 (356)
T ss_pred CCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcc----hHHHHHh-ccCCCEEEEEechhhccCcchhheeeec--CCH
Confidence 99999999999999999999999999999997431 1112222 2246899999999999999999999976 455
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
+.++++.. . ...| +++.++|.++..+|+++++.++.+
T Consensus 230 ~~~~~l~~----~-~~~~-~~~~~~~~~a~~~l~~~~~~~~~~ 266 (356)
T PRK08056 230 AAVARMRR----Q-QMPW-SINAFAALAGEVILQDRAYQQATW 266 (356)
T ss_pred HHHHHHHH----h-CCCC-chhHHHHHHHHHHhCCHHHHHHHH
Confidence 55554432 2 2233 567889999999998766544433
No 85
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-35 Score=281.42 Aligned_cols=243 Identities=13% Similarity=0.040 Sum_probs=183.2
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.++|+|+.|++. ..+++.+.+++.+........|++. |.++||+++|+|+ + +++++ +++|+|++++
T Consensus 24 ~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~~~~~~y~~~-~~~~lr~aia~~~-~-----~~~~~--I~it~G~~~a 89 (353)
T PRK05387 24 AKLIKLNTNENP-----YPPSPKVLEAIRAALGDDLRLYPDP-NADALRQAIAAYY-G-----LDPEQ--VFVGNGSDEV 89 (353)
T ss_pred cceeeccCCCCC-----CCCCHHHHHHHHHHhhhhhhcCCCC-cHHHHHHHHHHHh-C-----CCHHH--EEEcCCHHHH
Confidence 468999998642 3346677877765422224578654 6799999999997 2 33555 5799999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.++++.+.+ |||+|++++|+|+.|...++..|++++.+|+. + ++++|++++++ ..+.+ ++||||||||
T Consensus 90 l~~~~~~l~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~------~~~~v-~~~~P~NPtG 158 (353)
T PRK05387 90 LAHAFLAFFN--HDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD-D-DFSIDVEDYLR------PNGGI-IFPNPNAPTG 158 (353)
T ss_pred HHHHHHHhcC--CCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC-C-CCCCCHHHHHh------cCCEE-EEeCCCCCCC
Confidence 9999988766 99999999999999999999999999999983 2 57899988763 12344 4589999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|++.++ +++||+||+|.+|.. ... .. +....+++++++||||.||++|+|+||+++ ++
T Consensus 159 ~~~~~~~~~~l~~~~~--~~~livDe~y~~~~~----~~~--~~-~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~---~~ 226 (353)
T PRK05387 159 IALPLAEIERILAANP--DSVVVIDEAYVDFGG----ESA--IP-LIDRYPNLLVVQTFSKSRSLAGLRVGFAIG---HP 226 (353)
T ss_pred CCCCHHHHHHHHHhCC--CcEEEEeCcccccCC----cch--HH-HHhhCCCEEEEEehhHhhcchhhhceeeec---CH
Confidence 9999999999998653 899999999988731 111 11 223346899999999999999999999985 56
Q ss_pred HHHHHHHHHHHhhhccc-ccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 291 KQAVAVKSQLQQLARPM-YSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
++++++.. ..... ..+++.++|.++..+|.++++.++.++
T Consensus 227 ~~~~~l~~----~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 267 (353)
T PRK05387 227 ELIEALNR----VKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRA 267 (353)
T ss_pred HHHHHHHH----hhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHH
Confidence 65555443 22221 224678999999999987665544443
No 86
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-35 Score=281.85 Aligned_cols=247 Identities=16% Similarity=0.123 Sum_probs=186.9
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
....++|+.|++. ..+++.+.+++.+... ...+|++. +.++||+++|+|+ + +++++ +++|+|+++
T Consensus 31 ~~~~~~l~~~~~~-----~~~~~~~~~a~~~~~~-~~~~Y~~~-~~~~Lr~~ia~~~-~-----~~~~~--I~it~G~~~ 95 (369)
T PRK08153 31 RPFRARIGANESG-----FGPSPSVIAAMREAAA-EIWKYGDP-ENHDLRHALAAHH-G-----VAPEN--IMVGEGIDG 95 (369)
T ss_pred CcceeEecCCCCC-----CCCCHHHHHHHHHHHH-HhhcCCCC-ccHHHHHHHHHHh-C-----CCHHH--EEEcCCHHH
Confidence 3446799998642 4456667776654311 23578776 5789999999997 2 33454 579999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++.++.+ |||.|++++|+|+.|...++..|++++.+|+ +. .++|++.+++.+... +.+++++ |||||||
T Consensus 96 ~l~~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~-~~--~~~~~~~l~~~~~~~-~~~~i~l-~~P~NPt 168 (369)
T PRK08153 96 LLGLIVRLYVE--PGDPVVTSLGAYPTFNYHVAGFGGRLVTVPY-RD--DREDLDALLDAARRE-NAPLVYL-ANPDNPM 168 (369)
T ss_pred HHHHHHHHhcC--CCCEEEECCCcchHHHHHHHHcCCeEEEeeC-CC--CCCCHHHHHHHhccc-CCcEEEE-eCCCCCC
Confidence 99999888766 9999999999999999999999999999997 32 468899888766432 2345554 8999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|++.|+ ++++||+||+|.+|.+++ ... .+....+++++++||||+||+||+|+||+++ +
T Consensus 169 G~~~~~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~---~~~---~~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~---~ 238 (369)
T PRK08153 169 GSWHPAADIVAFIEALP-ETTLLVLDEAYCETAPAG---AAP---PIDTDDPNVIRMRTFSKAYGLAGARVGYAIG---A 238 (369)
T ss_pred CCCCCHHHHHHHHHhCC-CCcEEEEeCchhhhcCcc---cch---hhhhcCCCEEEEecchHhccCcchheeeeec---C
Confidence 99999999999999887 499999999999987531 111 2223346899999999999999999999986 4
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
+++++.+.. ... .+ +++.++|.++..+|+++++.++.++
T Consensus 239 ~~~~~~l~~----~~~-~~-~~s~~~q~~~~~~l~~~~~~~~~~~ 277 (369)
T PRK08153 239 PGTIKAFDK----VRN-HF-GMNRIAQAAALAALKDQAYLAEVVG 277 (369)
T ss_pred HHHHHHHHH----hhc-CC-CCCHHHHHHHHHHhcCHHHHHHHHH
Confidence 555555443 222 34 4789999999999987655444433
No 87
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-35 Score=275.49 Aligned_cols=241 Identities=17% Similarity=0.160 Sum_probs=180.8
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
.+.++|+.|.+. ..+++.+.+++.+ +.......|+ ..|.++||+++++|+ + +++++ +++|+|+++
T Consensus 18 ~~~i~l~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~-~-----~~~~~--I~~t~G~~~ 83 (337)
T PRK03967 18 NYRIWLDKNENP-----FDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFY-G-----LDAEN--IAVGNGSDE 83 (337)
T ss_pred CceEEecCCCCC-----CCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHh-C-----cCcce--EEEcCCHHH
Confidence 357999998642 2344566665544 3322345785 579999999999998 2 34555 579999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++..+ +||+|++++|+|+.|..+++..|.+++.+++. . ++++|++.+++.+. +.+++++ +||||||
T Consensus 84 ~l~~~~~~~----~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~~~---~~~~v~~-~~P~NPt 153 (337)
T PRK03967 84 LISYLVKLF----EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK-E-DFTIDGERIAEKAK---NASAVFI-CSPNNPT 153 (337)
T ss_pred HHHHHHHHh----CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC-C-CCCcCHHHHHHhcc---CCCEEEE-eCCCCCC
Confidence 998876654 69999999999999999999999999999984 2 47899999987542 3345554 8999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++.+++ +++++||+||+|.+|... .. . .+....+++++++||||+||+||+|+||+++ +
T Consensus 154 G~~~~~~~l~~i~----~~~~~ii~De~y~~~~~~----~~--~-~~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~---~ 219 (337)
T PRK03967 154 GNLQPEEEILKVL----ETGKPVVLDEAYAEFSGK----SL--I-GLIDEYPNLILLRTFSKAFGLAGIRAGYAIA---N 219 (337)
T ss_pred CCCCCHHHHHHHH----hcCCEEEEECchhhhccc----ch--H-HHHhhCCCEEEEecchHhhcchhhhheeeec---C
Confidence 9999998877765 479999999999998521 11 1 1223346899999999999999999999986 4
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
+++++++.. +. ..| +++.++|.++..+|++.++..+|+++
T Consensus 220 ~~~i~~~~~----~~-~~~-~~~~~~q~~~~~~l~~~~~~~~~~~~ 259 (337)
T PRK03967 220 EEIIDALYR----IK-PPF-SLNILTMKIVRLALDHYDLIEERIDY 259 (337)
T ss_pred HHHHHHHHh----hc-CCC-CCCHHHHHHHHHHHhCHHHHHHHHHH
Confidence 666555543 22 234 56899999999999987666665543
No 88
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-35 Score=278.12 Aligned_cols=246 Identities=17% Similarity=0.146 Sum_probs=188.1
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
.++++|+.|++ ...+++.+.+++.+ +......+|++ .|.++||+++++|+ +.. ..++ +++|+|+++
T Consensus 26 ~~~i~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~-~~~----~~~~--I~~t~G~~~ 92 (356)
T PRK04870 26 TGMVKLDAMEN-----PYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAM-GVP----AGAD--VLLGNGSDE 92 (356)
T ss_pred CCceeCcCCCC-----CCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHh-CcC----CCCc--EEEcCCHHH
Confidence 47899999863 24567788887765 33334567876 68899999999997 321 1123 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++.++.. |||+|++++|+|+.|...++..|++++.+|+. + ++++|++.+++.+... +.+++++ |+|||||
T Consensus 93 ~i~~~~~~~~~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~-~-~~~~d~~~l~~~~~~~-~~~~v~l-~~p~NPt 166 (356)
T PRK04870 93 LIQLLALACAK--PGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT-A-DFTLDLPAMLAAIAEH-RPALVFL-AYPNNPT 166 (356)
T ss_pred HHHHHHHHhcC--CCCEEEECCCCHHHHHHHHHHcCCEEEEecCC-C-CCCCCHHHHHHHhhcC-CCCEEEE-cCCCCCC
Confidence 99999887766 99999999999999999999999999999984 3 5889999999988642 3345555 8999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|+++| ++++|+||+|.+|.+. .. ...+ ...+++++++|||| |++||+|+||+++ +
T Consensus 167 G~~~~~~~~~~i~~~~---~~~ii~De~y~~~~~~----~~--~~~~-~~~~~vi~~~S~SK-~~~~GlRiG~~i~---~ 232 (356)
T PRK04870 167 GNLFDDADVERIIEAA---PGLVVVDEAYQPFAGD----SW--LPRL-ARFPNLLVMRTVSK-LGLAGLRLGYLAG---H 232 (356)
T ss_pred CCCCCHHHHHHHHHHC---CCEEEEECCchhhcCc----ch--HHHH-hhCCCEEEEecchh-hhhHHHhhhhhhC---C
Confidence 9999999999999998 6789999999988632 11 1112 23458999999999 9999999999985 4
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
++.++++.. . +..| +.+.++|.++..++++.+..++++++
T Consensus 233 ~~~i~~~~~----~-~~~~-~~~~~~q~~a~~~l~~~~~~~~~~~~ 272 (356)
T PRK04870 233 PAWIAELDK----V-RPPY-NVNVLTQATALFALEHVDVLDAQAAQ 272 (356)
T ss_pred HHHHHHHHH----c-cCCC-cCCHHHHHHHHHHHhCHHHHHHHHHH
Confidence 555555443 2 2234 47889999999999876554555443
No 89
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=7.6e-35 Score=279.41 Aligned_cols=244 Identities=16% Similarity=0.141 Sum_probs=185.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.++|+|+.|++. ..++|.+.+++... .....|++ .+.++||+++++|+ + +++++ +++|+|++++
T Consensus 52 ~~~i~l~~n~~p-----~~~~~~v~~a~~~~--~~~~~Yp~-~~~~~lr~~ia~~~-~-----~~~~~--I~~t~Ga~~~ 115 (380)
T PLN03026 52 EDIVKLDANENP-----YGPPPEVLEALGNM--KFPYVYPD-PESRRLRAALAEDS-G-----LESEN--ILVGCGADEL 115 (380)
T ss_pred cceEEccCCCCC-----CCCCHHHHHHHHhh--HhhccCCC-CCHHHHHHHHHHHh-C-----cChhh--EEEcCCHHHH
Confidence 578999998632 33556677766543 12245754 57899999999987 2 23455 4789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+.. |||+|++++|+|+.|...++..|++++.+|+. + ++++|++.+++.+.. ++.+++++ ||||||||
T Consensus 116 i~~~~~~~~~--~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~~~~-~~~~~v~l-~~P~NPTG 189 (380)
T PLN03026 116 IDLLMRCVLD--PGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT-P-DFSLDVPRIVEAVET-HKPKLLFL-TSPNNPDG 189 (380)
T ss_pred HHHHHHHhcC--CCCEEEEcCCChHHHHHHHHHcCCEEEEeecC-C-CCCcCHHHHHHHHhc-cCCcEEEE-eCCCCCCC
Confidence 9999877765 99999999999999999999999999999873 2 588999999988742 23345554 79999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|++.+ ++||+||+|.+|.++ .. ... .....+++++++||||.||++|||+||+++ ++
T Consensus 190 ~~~~~~~l~~l~~~~----~~vi~DeaY~~~~~~---~~--~~~-~~~~~~~viv~~SfSK~~glaGlRiGy~~~---~~ 256 (380)
T PLN03026 190 SIISDDDLLKILELP----ILVVLDEAYIEFSTQ---ES--RMK-WVKKYDNLIVLRTFSKRAGLAGLRVGYGAF---PL 256 (380)
T ss_pred CCCCHHHHHHHHhcC----CEEEEECcchhhcCC---cc--hHH-HHHhCCCEEEEecchHhhcCccccceeeec---CH
Confidence 999999999998754 899999999998742 11 122 223346899999999999999999999985 45
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
++++.+. +.. ..| +++.++|.++..+|+++++.++.+++
T Consensus 257 ~~i~~l~----~~~-~~~-~~~~~~q~aa~~aL~~~~~~~~~~~~ 295 (380)
T PLN03026 257 SIIEYLW----RAK-QPY-NVSVAAEVAACAALSNPKYLEDVKNA 295 (380)
T ss_pred HHHHHHH----Hhc-CCC-CCCHHHHHHHHHHhhCHHHHHHHHHH
Confidence 5555543 222 234 47889999999999987665555544
No 90
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-34 Score=274.05 Aligned_cols=236 Identities=16% Similarity=0.151 Sum_probs=172.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
.+.++|+.|++. ..+++.+.+++.+ +..+....|++ .|.++||+++++|+..++ +++++ +++|+|+++
T Consensus 19 ~~~i~l~~~~~~-----~~~p~~~~~~~~~~~~~~~~~~Y~~-~~~~~Lr~aia~~~~~~~---~~~~~--i~it~Ga~~ 87 (335)
T PRK14808 19 RDRTYLALNENP-----FPFPEDLVDEVFRRLNSDTLRIYYD-SPDEELIEKILSYLDTDF---LSKNN--VSVGNGADE 87 (335)
T ss_pred CceeEecCCCCC-----CCCCHHHHHHHHHHhhhhhhhcCCC-CChHHHHHHHHHHhCCCC---CCcce--EEEcCCHHH
Confidence 478999998642 4456667776654 33222334654 489999999999985543 45565 579999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++..+ |.|++++|+|+.|..+++.+|++++.+|+. + ++.++... +. .. .++++|||||||
T Consensus 88 ~i~~~~~~~------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~~~~----~~---~~-~~i~i~nP~NPT 151 (335)
T PRK14808 88 IIYVMMLMF------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLT-K-DLRIPEVN----VG---EG-DVVFIPNPNNPT 151 (335)
T ss_pred HHHHHHHHh------CcEEECCCCHHHHHHHHHHcCCeEEEecCC-C-cCCCChhH----cc---CC-CEEEEeCCCCCC
Confidence 999988765 679999999999999999999999999983 2 34444221 21 23 344459999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.++|++++++|+ +++++||+||+|.+|.. ... .. +....+++++++||||+||++|||+||+++ +
T Consensus 152 G~~~s~~~l~~l~----~~~~~ii~DE~Y~~f~~----~~~--~~-~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~---~ 217 (335)
T PRK14808 152 GHVFEREEIERIL----KTGAFVALDEAYYEFHG----ESY--VD-LLKKYENLAVIRTFSKAFSLAAQRIGYVVS---S 217 (335)
T ss_pred CCCcCHHHHHHHH----hcCCEEEEECchhhhcC----Cch--HH-HHHhCCCEEEEEechhhccCcccceEEEEe---C
Confidence 9999999999887 47999999999999842 111 11 222346899999999999999999999986 3
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
+++++++. ... ..+ +.+.++|.++..++++.++.++.+
T Consensus 218 ~~~~~~l~----~~~-~~~-~~~~~~q~a~~~~l~~~~~~~~~~ 255 (335)
T PRK14808 218 EKFIDAYN----RVR-LPF-NVSYVSQMFAKVALDHREIFEERT 255 (335)
T ss_pred HHHHHHHH----Hhc-CCC-CCCHHHHHHHHHHHhCHHHHHHHH
Confidence 45555543 222 233 578899999999998755444433
No 91
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=6e-35 Score=303.17 Aligned_cols=231 Identities=11% Similarity=0.060 Sum_probs=176.0
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
.+++|+|++|++. ..+++.+++++.+. ... .| ..|.+++|+++++|+.++++...++++ ++++|+|++
T Consensus 696 g~~vI~LsinE~d-----~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e-~IIvt~Gs~ 764 (1082)
T PLN02672 696 ESSLIHMDVDESF-----LPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCT-EFVYGDTSL 764 (1082)
T ss_pred CCCEEEEeCCCCC-----CCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCC-EEEEeCCHH
Confidence 4578999999642 44677788877653 221 22 347788999999999776554443322 357889999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCC-C
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAH-N 207 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~-N 207 (337)
+++.++++++.+ |||+|++++|+|+.|...++..|++++.+|+..++++.+|++.+++++... .++.+++ |||| |
T Consensus 765 elL~lll~aLl~--pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~-~~~~I~L-~nPnhN 840 (1082)
T PLN02672 765 ALFNKLVLCCVQ--EGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETV-KKPWVYI-SGPTIN 840 (1082)
T ss_pred HHHHHHHHHHcC--CCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccC-CCCEEEE-ECcCCC
Confidence 999988888877 999999999999999999999999999999854457889999999988532 2234454 7786 9
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc-hHHHH----Hhhhc--CCeEEEEeccccccccccccc
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD-AKAIR----IFLKD--GHLLGLAQSYAKNMGLYGQRV 280 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~-~~~~~----~~~~~--~~~~i~~~S~SK~~~~~G~Rv 280 (337)
|||.+||++++++|+++|++||++||+||+|.++.++. ... ..++. .+... ..++++++||||.|+++|||+
T Consensus 841 PTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~-~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRI 919 (1082)
T PLN02672 841 PTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDT-SGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEF 919 (1082)
T ss_pred CcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCC-CCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHh
Confidence 99999999999999999999999999999999988642 110 11111 11111 237999999999999999999
Q ss_pred ceeEeeeCCHHHHHHHHH
Q 047180 281 GCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 281 G~~~~~~~~~~~~~~~~~ 298 (337)
||+++ +++++++++..
T Consensus 920 GylIa--p~~eLi~~l~~ 935 (1082)
T PLN02672 920 GFLAL--NDSVLIDAFHS 935 (1082)
T ss_pred eeEEe--CCHHHHHHHHH
Confidence 99986 45666666654
No 92
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-33 Score=258.37 Aligned_cols=237 Identities=18% Similarity=0.202 Sum_probs=191.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhC--CCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-
Q 047180 86 NMEYLPMGGSVKMVEETLKLAYG--DNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR- 162 (337)
Q Consensus 86 ~~~Y~~~~G~~~lr~aia~~~~~--~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~- 162 (337)
...|.+..|+++||+++|+++.. .....+++++ +++|+|++++...++.+|++ |||..+||.|+||+|...++
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~--~Vv~~G~T~ane~l~fcLad--pgdafLvPtPyY~gfdrdl~~ 189 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPER--VVVTNGATSANETLMFCLAD--PGDAFLVPTPYYPGFDRDLRW 189 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccc--eEEecccchhhHHHHHHhcC--CCceeeecCCCCCccccccee
Confidence 45688889999999999999732 2345688887 47899999999999999988 99999999999999998888
Q ss_pred hcCceeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC
Q 047180 163 DAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 163 ~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
.+|.++++|.+..++++.++.+++|+++.++. .+..-+++.|||||.|.+++++++..|+++|.++++.||+||+|.
T Consensus 190 rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya 269 (471)
T KOG0256|consen 190 RTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYA 269 (471)
T ss_pred ccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhc
Confidence 48999999999777889999999999887632 223333347899999999999999999999999999999999999
Q ss_pred CCCCCCCccchHHHHHhhh----cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhH
Q 047180 240 GFASGDPERDAKAIRIFLK----DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHG 315 (337)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 315 (337)
.-+|+.. ...++..+.. ..+++.++.|+||.||+||+|+|.+.- .|+.+..+ ..++ ..++..|.+.
T Consensus 270 ~sVF~~~--~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS--~ne~Vvsa----A~km--ssf~~vSs~t 339 (471)
T KOG0256|consen 270 GSVFDKS--EFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYS--NNEDVVSA----ATKM--SSFGLVSSQT 339 (471)
T ss_pred ccccCcc--CceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEe--cChHHHHH----HHHH--hhccCCcHHH
Confidence 8876521 2222222222 236899999999999999999999874 56654443 3333 2356688999
Q ss_pred HHHHHHHhCCHHHHHHHHhhh
Q 047180 316 ALIVSTILGDAELKKLWLKEV 336 (337)
Q Consensus 316 q~~~~~~l~~~~~~~~w~~el 336 (337)
|..++..|+|..+.+++..|.
T Consensus 340 Q~~la~LLSD~~f~~~yl~en 360 (471)
T KOG0256|consen 340 QYLLASLLSDEEFTREYLREN 360 (471)
T ss_pred HHHHHHHhchHHHHHHHHHHH
Confidence 999999999988888887764
No 93
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.8e-33 Score=264.97 Aligned_cols=228 Identities=14% Similarity=0.189 Sum_probs=166.1
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGAC 131 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al 131 (337)
++|+|+.++.. .+++++.+.+ ..+ ..|+. |..+||+++++++ +. ++ +++|+|+++++
T Consensus 21 ~~i~l~~ne~p----~~~~~~~~~~--~~~-----~~yp~--~~~~Lr~~ia~~~-~~-------~~--I~it~Gs~~al 77 (330)
T PRK05664 21 DWLDLSTGIAP----WPWPVPAIPA--DAW-----ARLPE--TDDGLEAAARAYY-GA-------PQ--LLPVAGSQAAI 77 (330)
T ss_pred HheeecCCcCC----CCCCCcccCH--HHH-----HhCCC--ChHHHHHHHHHHh-CC-------CC--EEECcCHHHHH
Confidence 57999988532 1222222322 111 23643 4489999999987 21 33 58999999999
Q ss_pred HHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCC
Q 047180 132 RLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGV 211 (337)
Q Consensus 132 ~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~ 211 (337)
.+++. .. |||+|++++|+|+.|...++..|++++.+|+. .+++.+. ..+++++ ||||||||.
T Consensus 78 ~~~~~--~~--~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~---~~~~v~l-~nP~NPTG~ 139 (330)
T PRK05664 78 QALPR--LR--APGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD---SLDVLVV-VNPNNPTGR 139 (330)
T ss_pred HHHHH--cc--CCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc---CCCEEEE-eCCcCCCCC
Confidence 98753 23 89999999999999999999999999998762 2334342 2234444 789999999
Q ss_pred CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHH
Q 047180 212 DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEK 291 (337)
Q Consensus 212 ~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~ 291 (337)
+++.+++++|+++|++++++||+||+|.++... .++..+. ..+++++++||||+||+||||+||+++ +++
T Consensus 140 ~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~------~s~~~~~-~~~~vi~~~SfSK~~gl~GlRiG~~v~---~~~ 209 (330)
T PRK05664 140 RFDPARLLAWHARLAARGGWLVVDEAFMDNTPQ------HSLAACA-HRPGLIVLRSFGKFFGLAGARLGFVLA---EPA 209 (330)
T ss_pred ccCHHHHHHHHHHHHhcCCEEEEECCcccCCCc------ccccccc-cCCCEEEEeeccccccCCCcceEEEEe---CHH
Confidence 999999999999999999999999999877421 1222333 246899999999999999999999986 455
Q ss_pred HHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhhh
Q 047180 292 QAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKEV 336 (337)
Q Consensus 292 ~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~el 336 (337)
+++.+.. ... .| +.+.+.|.++..+|++..+.+++++++
T Consensus 210 l~~~~~~----~~~-~~-~~~~~~~~~~~~~L~~~~~~~~~~~~~ 248 (330)
T PRK05664 210 LLRALAE----LLG-PW-TVSGPTRWLAQAALADTPWQRRQRERL 248 (330)
T ss_pred HHHHHHH----hcC-CC-CCCHHHHHHHHHHHhChHHHHHHHHHH
Confidence 5555543 222 33 467889999999999876656655543
No 94
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.9e-33 Score=263.63 Aligned_cols=238 Identities=16% Similarity=0.137 Sum_probs=179.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
+..++|+.|++. ..+++.+.+++.+ +.......|++. +..+||+++|+|+ + .++++ +++|+|+++
T Consensus 22 ~~~~~l~~~~~~-----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~-~-----~~~~~--i~it~G~~~ 87 (351)
T PRK14807 22 PYKYKMDANETP-----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC-S-----VVPTN--IFVGNGSDE 87 (351)
T ss_pred CceeEccCCCCC-----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh-C-----CCccc--EEEecCHHH
Confidence 456889988642 4456777777655 332345678754 5689999999996 2 23454 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++..+.+ |||+|++++|+|+.|...++..|++++.+++. + ++++|++.+++.+... +.+++++ |||||||
T Consensus 88 ~l~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~~~~~-~~k~v~l-~~p~NPt 161 (351)
T PRK14807 88 IIHLIMLAFIN--KGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK-E-DYTYDVGSFIKVIEKY-QPKLVFL-CNPNNPT 161 (351)
T ss_pred HHHHHHHHhcC--CCCEEEEeCCChHHHHHHHHHcCCeEEEeecC-C-CCCCCHHHHHHHhhcc-CCCEEEE-eCCCCCC
Confidence 99999887766 99999999999999999999999999999873 2 4789999999988632 3345555 7999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|++ +++.++|+||+|.+|. + ... .. +....+++|+++||||.||+||||+||+++ +
T Consensus 162 G~~~~~~~l~~l~~---~~~~~~ivDe~y~~~~-~---~~~--~~-~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~---~ 228 (351)
T PRK14807 162 GSVIEREDIIKIIE---KSRGIVVVDEAYFEFY-G---NTI--VD-VINEFENLIVLRTLSKAFGLAGLRVGYAVA---N 228 (351)
T ss_pred CCCCCHHHHHHHHH---hCCCEEEEeCcchhhc-c---cch--HH-HhhhCCCEEEEecchHhcccchhceeeeec---C
Confidence 99999998887765 5567899999998873 2 111 11 122346899999999999999999999985 4
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
+++++++.. +.. . .+++.+.|.++..+|+++.
T Consensus 229 ~~~~~~~~~----~~~-~-~~~~~~~q~~~~~~l~~~~ 260 (351)
T PRK14807 229 ENILKYLNL----VKS-P-YNINSLSQVIALKVLRTGV 260 (351)
T ss_pred HHHHHHHHH----ccC-C-CCcCHHHHHHHHHHHhHHH
Confidence 565555542 222 2 3467899999999998643
No 95
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=4.6e-33 Score=260.12 Aligned_cols=217 Identities=18% Similarity=0.181 Sum_probs=163.2
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.++|+|+.|+. |.+++.+.+++.+... ....|+. ...||+++++++ + + ++++|+|++++
T Consensus 8 ~~~i~l~~~~n------p~~p~~~~~a~~~~~~-~~~~yp~---~~~l~~~ia~~~-~--------~--~I~vt~G~~~a 66 (311)
T PRK08354 8 EGLIDFSASVN------PYPPEWLDEMFERAKE-ISGRYTY---YEWLEEEFSKLF-G--------E--PIVITAGITEA 66 (311)
T ss_pred cceeEecCCCC------CCCCHHHHHHHHHHHH-HhhcCCC---hHHHHHHHHHHH-C--------C--CEEECCCHHHH
Confidence 35899998752 3345667777655311 2346753 467999999886 2 1 25799999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++.++ . +||+|++++|+|+.|..+++..|++++.+ .+|++.+++.+. +.++++ +||||||||
T Consensus 67 l~~~~~~~-~--~gd~vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~---~~~~vi-~~~P~NPTG 131 (311)
T PRK08354 67 LYLIGILA-L--RDRKVIIPRHTYGEYERVARFFAARIIKG--------PNDPEKLEELVE---RNSVVF-FCNPNNPDG 131 (311)
T ss_pred HHHHHHhh-C--CCCeEEEeCCCcHHHHHHHHHcCCEEeec--------CCCHHHHHHhhc---CCCEEE-EecCCCCCC
Confidence 99877544 3 79999999999999999999999998754 357888887764 234444 489999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|+++|++++++||+||+|.+|.+++ . +. ..+++++++||||+||+||+|+||+++
T Consensus 132 ~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~---~--~~-----~~~~vi~~~S~SK~~~l~GlRiG~~v~----- 196 (311)
T PRK08354 132 KFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKP---E--SP-----EGENIIKLRTFTKSYGLPGIRVGYVKG----- 196 (311)
T ss_pred CccCHHHHHHHHHHhhhcCcEEEEeCcchhccccc---c--cc-----CCCcEEEEeccHhhcCCccceeeeeee-----
Confidence 99999999999999999999999999999997541 1 11 146899999999999999999999986
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
..+.+ ..+. ..| ..+..+|.++..++++
T Consensus 197 -~~~~l----~~~~-~~~-~~~~~~~~~~~~~~~~ 224 (311)
T PRK08354 197 -FEEAF----RSVR-MPW-SIGSTGYAFLEFLIED 224 (311)
T ss_pred -hHHHH----HHcC-CCc-cCCHHHHHHHHHHHHh
Confidence 12223 2222 233 3456678888877775
No 96
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-33 Score=265.78 Aligned_cols=212 Identities=15% Similarity=0.155 Sum_probs=165.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhc
Q 047180 86 NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDA 164 (337)
Q Consensus 86 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~ 164 (337)
...|++. +.++||+++|+++ + +++++ +++|+|+++++.+++.++.. +| |+|++++|+|+.|...++..
T Consensus 53 ~~~Y~~~-~~~~lr~~ia~~~-~-----~~~~~--I~~t~G~~~~l~~~~~~~~~--~g~~~vlv~~p~y~~~~~~~~~~ 121 (364)
T PRK04781 53 TRRYPDP-QPPGLRSALAALY-G-----CAPEQ--LLIGRGSDEAIDLLVRALCV--PGRDAVLVTPPVFGMYAVCARLQ 121 (364)
T ss_pred hccCCCC-CHHHHHHHHHHHh-C-----cChHH--EEEeCCHHHHHHHHHHHhcC--CCCCeEEEcCCChHHHHHHHHHc
Confidence 3568655 4689999999987 2 23455 57899999999999987765 78 89999999999999999999
Q ss_pred CceeeEeeecc-CCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCC
Q 047180 165 HVTQRTFHYYH-PGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFAS 243 (337)
Q Consensus 165 G~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~ 243 (337)
|++++.+|+.+ ++++.+|++.+++.+.. ++.+++++ ||||||||.+++.+++++|++.|+ ++++||+||+|.+|.+
T Consensus 122 g~~~~~v~~~~~~~~~~~d~~~l~~~~~~-~~~~lv~l-~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~ 198 (364)
T PRK04781 122 NAPLVEVPLVDGADGFHADVPAIVAAALA-SNAKLVFL-CSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSD 198 (364)
T ss_pred CCEEEEEecCCCccCCCcCHHHHHHHHhc-cCCeEEEE-cCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcC
Confidence 99999999843 23466788888765542 23345555 799999999999999999999985 5789999999999974
Q ss_pred CCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHh
Q 047180 244 GDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTIL 323 (337)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l 323 (337)
+ .. ...+....+++++++||||+||+||||+||+++ ++++++.+.. . ...| +.++++|.++..+|
T Consensus 199 ~---~~---~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~---~~~l~~~l~~----~-~~~~-~~~~~~~~~a~~~l 263 (364)
T PRK04781 199 V---PS---AVGLLARYDNLAVLRTLSKAHALAAARIGSLIA---NAELIAVLRR----C-QAPY-PVPTPCAALAEQAL 263 (364)
T ss_pred C---cc---hHHHHhhCCCEEEEecChhhcccccceeeeeeC---CHHHHHHHHh----c-cCCC-CCCHHHHHHHHHHH
Confidence 2 11 112223457899999999999999999999985 4665555443 3 2334 57889999999999
Q ss_pred CCH
Q 047180 324 GDA 326 (337)
Q Consensus 324 ~~~ 326 (337)
+++
T Consensus 264 ~~~ 266 (364)
T PRK04781 264 SAP 266 (364)
T ss_pred hcc
Confidence 875
No 97
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=7.7e-33 Score=265.48 Aligned_cols=242 Identities=20% Similarity=0.190 Sum_probs=187.2
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
.+.|+|+.|.+ ..++++.+.+++.+. .......|.+..|.++||+++++++ + .++++ +++|+|+++
T Consensus 28 ~~~i~l~~~~~-----~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l-~-----~~~~~--v~~~~g~t~ 94 (380)
T PRK06225 28 KEMIWMGQNTN-----HLGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL-G-----LDDDE--ALITAGATE 94 (380)
T ss_pred CCeEEccCCCC-----CCCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc-C-----CCCCc--EEEeCCHHH
Confidence 46899998753 244567787777664 3333467988899999999999986 3 22344 579999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc-CCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH-PGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~-~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
++.+++..+.. +||+|++++|+|..|...++..|++++.+++.. ++++.+|++.+++.+.. ..+++++ ++||||
T Consensus 95 al~~~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~--~~~~v~l-~~p~Np 169 (380)
T PRK06225 95 SLYLVMRAFLS--PGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDE--NTRLIYL-IDPLNP 169 (380)
T ss_pred HHHHHHHHhcC--CCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCC--CceEEEE-eCCCCC
Confidence 99999987765 899999999999999999999999999998743 23578999999988753 3344444 689999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|+++|+++|+||+|.+|..+. . +...+ ..++++++.||||.||++|+|+||+++
T Consensus 170 tG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~----~-~~~~~--~~~~~i~~~s~SK~~g~~G~RiG~i~~--- 239 (380)
T PRK06225 170 LGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREH----T-LAAEY--APEHTVTSYSFSKIFGMAGLRIGAVVA--- 239 (380)
T ss_pred CCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccC----C-chhhc--CCCCEEEEeechhhcCCccceeEEEec---
Confidence 9999999999999999999999999999999885421 1 11111 135789999999999999999999986
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++.. ..... .+.+.++|.++..+|..
T Consensus 240 ~~~l~~~~~~----~~~~~-~~~~~~~~~~a~~~l~~ 271 (380)
T PRK06225 240 TPDLIEVVKS----IVIND-LGTNVIAQEAAIAGLKV 271 (380)
T ss_pred CHHHHHHHHH----HHhcc-cCCCHHHHHHHHHHHhc
Confidence 4566555543 22222 34678899988888864
No 98
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-33 Score=265.01 Aligned_cols=208 Identities=18% Similarity=0.181 Sum_probs=163.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhc
Q 047180 86 NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDA 164 (337)
Q Consensus 86 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~ 164 (337)
...|+.. ...+|++++++++ + +++++ +++|+|+++++.++++++.. +| |+|++++|+|+.|...++..
T Consensus 51 ~~~Yp~~-~~~~l~~~~a~~~-g-----~~~~~--I~~~~Gs~e~i~~~~~~~~~--~g~~~vli~~P~y~~y~~~~~~~ 119 (351)
T PRK01688 51 LNRYPEC-QPKAVIENYAAYA-G-----VKPEQ--VLVSRGADEGIELLIRAFCE--PGKDAILYCPPTYGMYSVSAETI 119 (351)
T ss_pred cccCCCC-ChHHHHHHHHHHh-C-----CCHHH--EEEcCCHHHHHHHHHHHhcC--CCCCEEEEcCCCHHHHHHHHHHc
Confidence 4557554 3478999999985 3 23555 57899999999999987765 77 99999999999999999999
Q ss_pred CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCC
Q 047180 165 HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASG 244 (337)
Q Consensus 165 G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~ 244 (337)
|++++.+|+. + ++++|++.+++++. +.+++++ ||||||||.+++.+++++|++.|++ +.+||+||+|.+|...
T Consensus 120 G~~~~~v~~~-~-~~~~d~~~l~~~~~---~~~lv~l-~nPnNPTG~~~~~~~l~~l~~~~~~-~~~vivDEay~~f~~~ 192 (351)
T PRK01688 120 GVEIRTVPTL-D-NWQLDLPAIADNLD---GVKVVYV-CSPNNPTGNLINPQDLRTLLELTRG-KAIVVADEAYIEFCPQ 192 (351)
T ss_pred CCEEEEeecC-C-CCCCCHHHHHHhcc---CCcEEEE-eCCCCCCCCCCCHHHHHHHHHhCCC-CcEEEEECchhhcCCC
Confidence 9999999983 3 58999999988762 3345554 8999999999999999999999976 6889999999998631
Q ss_pred CCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 245 DPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.. ...+....+++++++||||.||++|+|+||+++ ++++++.+.. . ...| +.+.++|.++..+|.
T Consensus 193 ---~s---~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~---~~~~i~~l~~----~-~~~~-~v~~~~~~~a~~~L~ 257 (351)
T PRK01688 193 ---AS---LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLA---NEEVINLLLK----V-IAPY-PLSTPVADIAAQALS 257 (351)
T ss_pred ---CC---hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhC---CHHHHHHHHh----c-cCCC-CCCHHHHHHHHHHHh
Confidence 11 122333456899999999999999999999985 5666555443 2 2344 467788999999998
Q ss_pred CH
Q 047180 325 DA 326 (337)
Q Consensus 325 ~~ 326 (337)
+.
T Consensus 258 ~~ 259 (351)
T PRK01688 258 PQ 259 (351)
T ss_pred cc
Confidence 63
No 99
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=8.8e-33 Score=262.35 Aligned_cols=240 Identities=15% Similarity=0.203 Sum_probs=182.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
+++|+|+.|.+. ..+++.+.+++.+... ....|+ ..|.++||+++|+|+. .++++ +++|+|++++
T Consensus 22 ~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~-~~~~y~-~~g~~~lr~~ia~~~~------~~~~~--I~~~~G~~~~ 86 (352)
T PRK03321 22 PGAIKLSSNETP-----FGPLPSVRAAIARAAA-GVNRYP-DMGAVELRAALAEHLG------VPPEH--VAVGCGSVAL 86 (352)
T ss_pred ccceeccCCCCC-----CCCCHHHHHHHHHHHH-hcCcCC-CCcHHHHHHHHHHHhC------cCHHH--EEECCCHHHH
Confidence 368999998642 3345677777665311 234574 5799999999999972 23444 4679999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+.. |||+|+++.|+|+.|...++..|++++.+|+. + ++++|++.+++.+.. +.+++++ ++||||||
T Consensus 87 l~~~~~~~~~--~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~-~-~~~~~~~~l~~~~~~--~~~~v~l-~~p~NPtG 159 (352)
T PRK03321 87 CQQLVQATAG--PGDEVIFAWRSFEAYPILVQVAGATPVQVPLT-P-DHTHDLDAMAAAITD--RTRLIFV-CNPNNPTG 159 (352)
T ss_pred HHHHHHHhcC--CCCEEEeCCCCHHHHHHHHHHcCCEEEEccCC-C-CCCCCHHHHHHhhcc--CCCEEEE-eCCCCCcC
Confidence 9888877665 99999999999999999999999999999874 2 378999999988753 3345555 78999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++.++++.+ +++++||+||+|.+|.+++ ....++..+ ...+++++++||||.||+||+|+||+++ ++
T Consensus 160 ~~~~~~~l~~l~~~~-~~~~~ii~De~y~~~~~~~--~~~~~~~~~-~~~~~vi~~~S~SK~~g~~GlRiG~~v~---~~ 232 (352)
T PRK03321 160 TVVTPAELARFLDAV-PADVLVVLDEAYVEYVRDD--DVPDGLELV-RDHPNVVVLRTFSKAYGLAGLRVGYAVG---HP 232 (352)
T ss_pred CCcCHHHHHHHHHhC-CCCeEEEEechHHHhccCc--CCCcHHHHH-hhCCCEEEEecchHHhhhHHHhhhhhcC---CH
Confidence 999999999999876 4799999999999997642 111222222 2346899999999999999999999985 46
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++.+.. . ...+ +++.++|.++..+|..
T Consensus 233 ~~~~~~~~----~-~~~~-~~s~~~q~~a~~~l~~ 261 (352)
T PRK03321 233 EVIAALRK----V-AVPF-SVNSLAQAAAIASLAA 261 (352)
T ss_pred HHHHHHHH----h-cCCC-CCCHHHHHHHHHHhcC
Confidence 66655543 2 2233 5788999988888875
No 100
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.6e-32 Score=259.49 Aligned_cols=247 Identities=14% Similarity=0.130 Sum_probs=185.2
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
..++++|+.|.+. ..+++.+.+++.+... ....|++.. ..+||+++|+++ + .++++ +++|+|+++
T Consensus 31 ~~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~-~~~~y~~~~-~~~lr~~ia~~~-~-----~~~~~--i~~t~G~~~ 95 (367)
T PRK02731 31 IADIIKLASNENP-----LGPSPKAIEAIRAAAD-ELHRYPDGS-GFELKAALAEKF-G-----VDPER--IILGNGSDE 95 (367)
T ss_pred CCceEEecCCCCC-----CCCCHHHHHHHHHHHH-hhcCCCCCc-HHHHHHHHHHHh-C-----cCHHH--EEEcCCHHH
Confidence 3468999998642 2245667776655311 245787654 478999999987 2 23444 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++..+.+ +||+|++++|+|+.|...++..|++++.+|+ + ++++|++.+++.+.. +.+++++ |||||||
T Consensus 96 ~l~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~--~~~~~~~~l~~~~~~--~~~~v~l-~~p~npt 167 (367)
T PRK02731 96 ILELLARAYLG--PGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA-K--DYGHDLDAMLAAVTP--RTRLVFI-ANPNNPT 167 (367)
T ss_pred HHHHHHHHhcC--CCCEEEEecCCHHHHHHHHHHcCCeEEEecc-c--CCCCCHHHHHHHhCC--CCcEEEE-eCCCCCC
Confidence 99988877755 8999999999999999989999999999987 2 588999999988852 3345554 8999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|++.++ ++++||+||+|.++.+++. ...++..+ +..+++++++||||.||++|+|+||+++ +
T Consensus 168 G~~~~~~~l~~l~~~~~-~~~~li~De~y~~~~~~~~--~~~~~~~~-~~~~~~i~~~S~SK~~g~~G~RiG~l~~---~ 240 (367)
T PRK02731 168 GTYLPAEEVERFLAGVP-PDVLVVLDEAYAEYVRRKD--YEDGLELV-AKFPNVVVTRTFSKAYGLAGLRVGYGIA---P 240 (367)
T ss_pred CcCCCHHHHHHHHHhCC-CCcEEEEECcHHHhccCcC--cccHHHHH-hhcCCEEEEeeehHhhcCcccceeeeeC---C
Confidence 99999999999999875 6999999999999875321 11223222 3346899999999999999999999986 4
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHH
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLW 332 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w 332 (337)
+++++++. ... ..+ +.+.++|.++..+|++.++.++.
T Consensus 241 ~~~~~~l~----~~~-~~~-~~~~~~~~~a~~~l~~~~~~~~~ 277 (367)
T PRK02731 241 PEIIDALN----RVR-QPF-NVNSLALAAAVAALDDDAFVEKS 277 (367)
T ss_pred HHHHHHHH----Hcc-CCC-CCCHHHHHHHHHHhCCHHHHHHH
Confidence 55555443 322 233 45789999999999976544443
No 101
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=4e-32 Score=256.73 Aligned_cols=205 Identities=13% Similarity=0.096 Sum_probs=154.4
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCce
Q 047180 88 EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVT 167 (337)
Q Consensus 88 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~ 167 (337)
.|+.. . .+||+++++++ +.. ++++ +++|+|+++++.++..++ . +|| |++++|+|+.|...++..|++
T Consensus 50 ~Yp~~-~-~~L~~~ia~~~-~~~----~~~~--I~i~~Gs~e~i~~l~~~~-~--~g~-v~v~~P~y~~y~~~~~~~g~~ 116 (339)
T PRK06959 50 RLPED-D-DGLAACAARYY-GAP----DAAH--VLPVAGSQAAIRALPALL-P--RGR-VGIAPLAYSEYAPAFARHGHR 116 (339)
T ss_pred hCCCc-h-HHHHHHHHHHh-CCC----Cccc--EEECcCHHHHHHHHHHhc-C--CCe-EEEcCCCcHHHHHHHHHCCCE
Confidence 47543 3 89999999986 321 2344 578999999998776543 3 776 899999999999999999999
Q ss_pred eeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCc
Q 047180 168 QRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPE 247 (337)
Q Consensus 168 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~ 247 (337)
++++++.+ +.+.+ ..++++ +||||||||.++|.+++++|++.|.+++.+||+||+|.+|.+.
T Consensus 117 ~~~v~~~~--------~~~~~------~~~~v~-l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~--- 178 (339)
T PRK06959 117 VVPLDEAA--------DTLPA------ALTHLI-VVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPA--- 178 (339)
T ss_pred EEeecccc--------hhccc------cCCEEE-EeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCc---
Confidence 99887621 12211 113444 4899999999999999999999999999999999999998632
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
.++..+. ..+++++++||||.||+||+|+||+++ ++++++++.. . ...|+ .+.++|.++..+|++++
T Consensus 179 ---~s~~~~~-~~~~vi~l~SfSK~~gl~GlRiGy~v~---~~~li~~l~~----~-~~~~~-vs~~~q~a~~~~L~~~~ 245 (339)
T PRK06959 179 ---ASLAAHT-DRPGLVVLRSVGKFFGLAGVRAGFVLA---APALLAALRD----A-LGAWT-VSGPARHAVRAAFADAA 245 (339)
T ss_pred ---ccchhcc-CCCCEEEEecChhhcCCcchheEEEec---CHHHHHHHHH----h-cCCCC-CcHHHHHHHHHHhCcHH
Confidence 1222222 236799999999999999999999986 4666555543 2 23443 67899999999999887
Q ss_pred HHHHHHhhh
Q 047180 328 LKKLWLKEV 336 (337)
Q Consensus 328 ~~~~w~~el 336 (337)
+.+++++++
T Consensus 246 ~~~~~~~~~ 254 (339)
T PRK06959 246 WQAAMRERL 254 (339)
T ss_pred HHHHHHHHH
Confidence 766665543
No 102
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.5e-32 Score=259.63 Aligned_cols=206 Identities=16% Similarity=0.173 Sum_probs=161.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhc
Q 047180 86 NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDA 164 (337)
Q Consensus 86 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~ 164 (337)
...|++. +.++||+++|+++ + +++++ +++|+|+++++.+++.++.. || |+|++++|+|+.|...++..
T Consensus 54 ~~~Yp~~-~~~~Lr~aia~~~-~-----~~~~~--I~it~Gs~~~i~~~~~~~~~--~g~d~vlv~~P~y~~y~~~~~~~ 122 (354)
T PRK04635 54 LNRYPEC-QPPELINAYSAYA-G-----VAPEQ--ILTSRGADEAIELLIRAFCE--PGQDSIACFGPTYGMYAISAETF 122 (354)
T ss_pred hccCCCC-CHHHHHHHHHHHh-C-----cCHHH--EEEeCCHHHHHHHHHHHhcC--CCCCeEEEcCCChHHHHHHHHHc
Confidence 4568765 6899999999985 3 34555 57999999999999988776 88 99999999999999999999
Q ss_pred CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCC
Q 047180 165 HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASG 244 (337)
Q Consensus 165 G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~ 244 (337)
|++++.+|+. + ++.+|++.++. + ++.+++++ ||||||||.+++.+++++|++.|+ +++||+||+|.+|...
T Consensus 123 g~~v~~v~~~-~-~~~~~~~~l~~-~---~~~~li~i-~nP~NPTG~~~~~~~l~~l~~~~~--~~~vivDeay~~~~~~ 193 (354)
T PRK04635 123 NVGVKALPLT-A-DYQLPLDYIEQ-L---DGAKLVFI-CNPNNPTGTVIDRADIEQLIEMTP--DAIVVVDEAYIEFCPE 193 (354)
T ss_pred CCEEEEEecC-C-CCCCCHHHHHh-c---cCCCEEEE-eCCCCCCCccCCHHHHHHHHHhCC--CcEEEEeCchHhhccC
Confidence 9999999983 2 47889888863 3 23345554 899999999999999999999876 4999999999998632
Q ss_pred CCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 245 DPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
. +...+....+++++++||||+||++|+|+||+++ ++++++.+.. . ...| +.+.+.|.++..+|.
T Consensus 194 ---~---s~~~~~~~~~~~iv~~S~SK~~~l~GlRlG~~i~---~~~~~~~l~~----~-~~~~-~~~~~~~~~a~~~l~ 258 (354)
T PRK04635 194 ---Y---SVADLLASYPNLVVLRTLSKAFALAGARCGFTLA---NEELIEILMR----V-IAPY-PVPLPVSEIATQALS 258 (354)
T ss_pred ---c---chHHHHhhCCCEEEEechHHHhhhhHHHHhhhhC---CHHHHHHHHh----h-cCCC-CCCHHHHHHHHHHHh
Confidence 1 1222333456899999999999999999999975 5666555432 2 2234 467788999999997
Q ss_pred CH
Q 047180 325 DA 326 (337)
Q Consensus 325 ~~ 326 (337)
+.
T Consensus 259 ~~ 260 (354)
T PRK04635 259 EA 260 (354)
T ss_pred cc
Confidence 63
No 103
>PRK07908 hypothetical protein; Provisional
Probab=99.98 E-value=4.9e-31 Score=250.23 Aligned_cols=229 Identities=17% Similarity=0.154 Sum_probs=167.2
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
.++.+||++|++. +.+++.+.+++.+... ...+|++..|.++||+++++|+ + +++++ +++|+|+++
T Consensus 21 ~~~~~~l~~~~~~-----~~~~~~~~~~~~~~~~-~~~~Y~~~~g~~~lr~aia~~~-~-----~~~~~--I~it~Ga~~ 86 (349)
T PRK07908 21 GPGLLDFAVNVRH-----DTPPEWLRERLAARLG-DLAAYPSTEDERRARAAVAARH-G-----RTPDE--VLLLAGAAE 86 (349)
T ss_pred CCCeEEecCCCCC-----CCCCHHHHHHHHHHhh-HhhcCCCccchHHHHHHHHHHh-C-----cChhh--EEECCCHHH
Confidence 4679999998631 4456777777765312 2457988889999999999997 2 23555 579999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.++++ + . | +.++++.|+|+.|...++..|.+++.+|+. + ++++|++.+. + ..++++ +|||||||
T Consensus 87 al~~~~~-l-~--~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~-~-~~~~d~~~l~----~--~~~~i~-l~np~NPT 152 (349)
T PRK07908 87 GFALLAR-L-R--P-RRAAVVHPSFTEPEAALRAAGIPVHRVVLD-P-PFRLDPAAVP----D--DADLVV-IGNPTNPT 152 (349)
T ss_pred HHHHHHh-c-C--C-CeEEEeCCCChHHHHHHHHcCCEEEeeccC-c-ccCcChhHhc----c--CCCEEE-EcCCCCCC
Confidence 9998877 3 3 6 467789999999999999999999999983 3 3788887542 1 233444 49999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++.++ |+ ++.++|+||+|.+|..+. ..++... ..+++++++||||.||++|+|+||+++ +
T Consensus 153 G~~~~~~~l~~l---~~-~~~~iIvDe~y~~~~~~~----~~~l~~~--~~~~~i~i~S~SK~~~l~GlRiG~~~~---~ 219 (349)
T PRK07908 153 SVLHPAEQLLAL---RR-PGRILVVDEAFADAVPGE----PESLAGD--DLPGVLVLRSLTKTWSLAGLRVGYALG---A 219 (349)
T ss_pred CCCcCHHHHHHH---Hh-cCCEEEEECcchhhccCC----ccccccc--cCCCEEEEeecccccCCccceeeeeec---C
Confidence 999999876555 54 577888899999986431 1122211 235799999999999999999999985 4
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+++++++.. .. ..| +.+.+.|.++..++++
T Consensus 220 ~~~~~~~~~----~~-~~~-~~~~~~~~a~~~~~~~ 249 (349)
T PRK07908 220 PDVLARLTR----GR-AHW-PVGTLQLEAIAACCAP 249 (349)
T ss_pred HHHHHHHHh----cC-CCC-CccHHHHHHHHHHhcc
Confidence 555555443 22 223 4566778888888774
No 104
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.98 E-value=2.5e-31 Score=250.66 Aligned_cols=182 Identities=14% Similarity=0.138 Sum_probs=140.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCc
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHV 166 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~ 166 (337)
..|+. .-..+||+++++|+ +. ++++ +++|+|+++++.+++.++ . || .|++++|+|+.|...++..|+
T Consensus 35 ~~Yp~-~~~~~lr~~ia~~~-~~-----~~~~--I~it~Gs~~~l~~~~~~~-~--~~-~vv~~~P~y~~y~~~~~~~G~ 101 (332)
T PRK06425 35 SIYPE-ISYTDIEDQIKIYT-QG-----LKIK--VLIGPGLTHFIYRLLSYI-N--VG-NIIIVEPNFNEYKGYAFTHGI 101 (332)
T ss_pred ccCcC-cCHHHHHHHHHHHh-CC-----Ccce--EEECCCHHHHHHHHHHHh-C--CC-cEEEeCCChHHHHHHHHHcCC
Confidence 35743 34789999999986 32 2344 689999999999988753 3 66 577779999999999999999
Q ss_pred eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCC
Q 047180 167 TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDP 246 (337)
Q Consensus 167 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~ 246 (337)
+++.+|+. . +++|.+.+++ . +.+++++ ||||||||.+++.+++++|+++|++++++||+||+|.+|.++.
T Consensus 102 ~v~~vp~~-~--~~~~~~~l~~----~-~~k~v~l-~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~- 171 (332)
T PRK06425 102 RISALPFN-L--INNNPEILNN----Y-NFDLIFI-VSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNR- 171 (332)
T ss_pred eEEEEeCC-c--ccCcHHHHhh----c-CCCEEEE-eCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhcccccc-
Confidence 99999983 2 4556544432 1 3345555 7999999999999999999999999999999999999997531
Q ss_pred ccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHH
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
..+...+....+++|+++||||+||+||+|+||+++ ++++++++.
T Consensus 172 ---~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~---~~~li~~l~ 216 (332)
T PRK06425 172 ---AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIAT---DDYNMKISR 216 (332)
T ss_pred ---chhHHHHhccCCCEEEEeecHHhcCCchhhheeeec---CHHHHHHHH
Confidence 112233333346899999999999999999999986 455555544
No 105
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.98 E-value=8.2e-31 Score=249.53 Aligned_cols=238 Identities=18% Similarity=0.161 Sum_probs=175.5
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEe-eccchhH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ-SLSGTGA 130 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~-t~g~~~a 130 (337)
++|+|++|.+. ..++|.+.+++.+... ....|++..+ ++||+++++|+ + .++++ +++ |+|++++
T Consensus 35 ~~i~l~~~~~~-----~~~~~~~~~~~~~~~~-~~~~y~~~~~-~~lr~~ia~~~-~-----~~~~~--i~~~~~Ga~~~ 99 (361)
T PRK00950 35 SIIKLGSNENP-----LGPSPKAVEAIEKELS-KIHRYPEPDA-PELREALSKYT-G-----VPVEN--IIVGGDGMDEV 99 (361)
T ss_pred ceEEccCCCCC-----CCCCHHHHHHHHHHHH-hhcCCCCCCH-HHHHHHHHHHh-C-----CCHHH--EEEeCCCHHHH
Confidence 68999998632 3345666666544211 2356876544 89999999987 2 23444 356 6788999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+.+ |||+|++++|+|+.|...++..|++++.++. + +++++|++.+++.+.. +.+++++ ++||||||
T Consensus 100 i~~~~~~~~~--~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~-~-~~~~~~~~~l~~~~~~--~~~~v~~-~~p~nptG 172 (361)
T PRK00950 100 IDTLMRTFID--PGDEVIIPTPTFSYYEISAKAHGAKPVYAKR-E-EDFSLDVDSVLNAITE--KTKVIFL-CTPNNPTG 172 (361)
T ss_pred HHHHHHHhcC--CCCEEEEcCCChHHHHHHHHHcCCEEEEeec-C-CCCCcCHHHHHHHhcc--CCCEEEE-eCCCCCCC
Confidence 9888877655 8999999999999999999999999999885 3 3578999999988752 3345555 79999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++.+|+ ++++++||+||+|.+|... +. ..+....+++++++||||+||+||+|+||+++ ++
T Consensus 173 ~~~~~~~l~~l~---~~~~~~li~De~y~~~~~~----~~---~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~~~---~~ 239 (361)
T PRK00950 173 NLIPEEDIRKIL---ESTDALVFVDEAYVEFAEY----DY---TPLALEYDNLIIGRTFSKVFGLAGLRIGYGFV---PE 239 (361)
T ss_pred CCcCHHHHHHHH---HHCCcEEEEECchhhhCcc----ch---HHHHHhcCCEEEEEeehHhhcCchhhcchhcC---CH
Confidence 999999877665 5679999999999988521 11 12223346899999999999999999999985 45
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKK 330 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 330 (337)
++++.+.. .. ..+ +.+.++|.++..+|++.++.+
T Consensus 240 ~~~~~~~~----~~-~~~-~~~~~~~~~a~~~l~~~~~~~ 273 (361)
T PRK00950 240 WLIDYYMR----AK-TPF-SLTRLSQAAAIAALSDKEYIE 273 (361)
T ss_pred HHHHHHHH----hc-CCC-CCCHHHHHHHHHHhcCHHHHH
Confidence 55554433 22 233 367889999999998765433
No 106
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.98 E-value=5.7e-31 Score=248.00 Aligned_cols=244 Identities=16% Similarity=0.183 Sum_probs=179.6
Q ss_pred chhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc
Q 047180 37 PILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD 116 (337)
Q Consensus 37 ~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~ 116 (337)
++..+.+++. .+.++.++|+.|.+ +..++.... .......|++..| ++||+++++++ + +++
T Consensus 4 ~~~~~~~~~~-~~~~~~~~~~~~~~------~~~~~~~~~-----~~~~~~~y~~~~~-~~lr~~la~~~-~-----~~~ 64 (330)
T TIGR01140 4 NLRRAAARYG-IPPEDWLDFSTGIN------PLGPPVPPI-----PASAWARYPDPEY-DELRAAAAAYY-G-----LPA 64 (330)
T ss_pred cHHHHHHHcC-CChhheeEccccCC------CCCCChhhc-----chHHHhhCCCccH-HHHHHHHHHHh-C-----CCh
Confidence 4555555542 23567899999963 222232221 1123456877766 99999999986 3 224
Q ss_pred CceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 117 KRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 117 ~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
++ +++|.|+++++.++..++. +| .|++++|+|+.|...++..|.+++.++ |++.+++.+. +.
T Consensus 65 ~~--i~~t~G~~~~i~~~~~~l~---~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~---~~ 126 (330)
T TIGR01140 65 AS--VLPVNGAQEAIYLLPRLLA---PG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE---EL 126 (330)
T ss_pred hh--EEECCCHHHHHHHHHHHhC---CC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc---cC
Confidence 44 5789999999999876653 67 799999999999999999999998875 6788888773 23
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
+++++ ++||||||.+++.+++++|+++|+++|++||+||+|.++.++ . ++..+....+++++++||||+||++
T Consensus 127 ~~v~i-~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~---~---~~~~~~~~~~~~i~~~S~SK~~g~~ 199 (330)
T TIGR01140 127 DVLVL-CNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPD---A---SLAPQAARFPGLVVLRSLTKFFGLA 199 (330)
T ss_pred CEEEE-eCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCc---c---chhhHhccCCCEEEEEecchhhcCc
Confidence 45554 889999999999999999999999999999999999998642 1 1222222346899999999999999
Q ss_pred ccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
|+|+||+++ ++++++++.. +. ..+ +++.++|.++..+++++++.++.+
T Consensus 200 G~R~G~i~~---~~~~~~~l~~----~~-~~~-~~s~~~q~~~~~~l~~~~~~~~~~ 247 (330)
T TIGR01140 200 GLRLGFVVA---HPALLARLRE----AL-GPW-TVNGPARAAGRAALADTAWQAATR 247 (330)
T ss_pred hhhhhheeC---CHHHHHHHHh----cC-CCC-CchHHHHHHHHHHHhchHHHHHHH
Confidence 999999986 4555555543 22 234 457889999999999866544433
No 107
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.98 E-value=4.7e-31 Score=249.80 Aligned_cols=239 Identities=15% Similarity=0.153 Sum_probs=181.3
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.++|||++|.+. ..+++.+.+++.+... ..+.|++..| ++||+++++++. .++++ +++|.|++++
T Consensus 19 ~~~i~l~~~~~~-----~~~~~~~~~a~~~~~~-~~~~y~~~~~-~~lr~~ia~~~~------~~~~~--i~~~~G~~~~ 83 (346)
T TIGR01141 19 KEVIKLNSNENP-----FGPPPKAKEALRAEAD-KLHRYPDPDP-AELKQALADYYG------VDPEQ--ILLGNGSDEI 83 (346)
T ss_pred CceEEccCCCCC-----CCCCHHHHHHHHHhHH-HhhcCCCCCH-HHHHHHHHHHhC------cChHH--EEEcCCHHHH
Confidence 469999999752 3345667776655311 2457877666 899999999973 22344 5689999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+..++..+.. +||+|++++|+|+.|...++..|.+++.+++.. ++.+|++++++.+. ++.+++++ ++||||||
T Consensus 84 l~~~~~~l~~--~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~~~--~~~~~v~l-~~p~NptG 156 (346)
T TIGR01141 84 IELLIRAFLE--PGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDE--DGQLDLEDILVAID--DKPKLVFL-CSPNNPTG 156 (346)
T ss_pred HHHHHHHhcC--CCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCC--CCCCCHHHHHHhcC--CCCCEEEE-eCCCCCCC
Confidence 9888877765 899999999999999999999999999999843 36789999998764 23344454 79999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|++.++ +++++|+||+|.++..+ .. ....+ ...+++++++||||.||++|+|+||+++ ++
T Consensus 157 ~~~~~~~~~~l~~~~~-~~~~ii~D~~y~~~~~~---~~--~~~~~-~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~~ 226 (346)
T TIGR01141 157 NLLSRSDIEAVLERTP-EDALVVVDEAYGEFSGE---PS--TLPLL-AEYPNLIVLRTLSKAFGLAGLRIGYAIA---NA 226 (346)
T ss_pred CCCCHHHHHHHHHhCC-CCcEEEEECchhhhcCC---cc--HHHHH-hhCCCEEEEehhhHhhhchhhhceeeec---CH
Confidence 9999999999999987 79999999999987632 11 11112 2235789999999999999999999985 45
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
++++++.. .. ..+ +.+.++|.++..++++..
T Consensus 227 ~~~~~~~~----~~-~~~-~~~~~~~~~~~~~l~~~~ 257 (346)
T TIGR01141 227 EIIDALNK----VR-APF-NLSRLAQAAAIAALRDDD 257 (346)
T ss_pred HHHHHHHh----cc-CCC-CCCHHHHHHHHHHhCCHH
Confidence 55555433 22 233 467889999999998764
No 108
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.96 E-value=2e-28 Score=226.59 Aligned_cols=238 Identities=16% Similarity=0.108 Sum_probs=185.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHh-CCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh
Q 047180 85 ANMEYLPMGGSVKMVEETLKLAY-GDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD 163 (337)
Q Consensus 85 ~~~~Y~~~~G~~~lr~aia~~~~-~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~ 163 (337)
...+|++..|.++|+..+.++.. ..+.+... ...+++|+|.+.+++.+++.+.+ +||.|+|..++|+.-.+.++.
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p~~~--~wdiiit~G~t~~l~~~l~~~~N--~gd~vlie~~ty~~AL~s~~a 167 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAPPYK--NWDIIITNGNTDGLFKVLRTLIN--RGDHVLIEEYTYPSALQSMEA 167 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCCCCC--CceEEEecCCchHHHHHHHHhhc--CCCceEEecccchHHHHhccc
Confidence 35789999999999999999642 23444332 34578999999999999988877 899999999999999999999
Q ss_pred cCceeeEeeeccCCCCCCChHHHHHHHHcC-------CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 164 AHVTQRTFHYYHPGTKGLDFAALMDDIKNA-------PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 164 ~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~-------~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
.|++++++++ + ..++++|.|++.+..- +...+++.+++-|||||..+|.+..++|.++|++||++||+||
T Consensus 168 ~gv~~ipv~m-d--~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDd 244 (472)
T KOG0634|consen 168 LGVKIIPVKM-D--QDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDD 244 (472)
T ss_pred cCceEEeccc-c--CCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecC
Confidence 9999999988 3 3789999999987651 3356899999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCc------cchHHHHHhh--------h--cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHH
Q 047180 237 AYQGFASGDPE------RDAKAIRIFL--------K--DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQL 300 (337)
Q Consensus 237 ~Y~~~~~~~~~------~~~~~~~~~~--------~--~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l 300 (337)
+|.-+.+++++ ....+.+.|. . ...|||-..||||.++ ||+|+||+.+ ++..++++...
T Consensus 245 pYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiia-PGlRlG~it~---~~~~l~ril~~- 319 (472)
T KOG0634|consen 245 PYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIA-PGLRLGWITG---NSLFLKRILDL- 319 (472)
T ss_pred ccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhc-CcceeEEeec---CHHHHHHHhhh-
Confidence 99766554221 1111111221 1 1258999999999999 8999999975 56566665542
Q ss_pred HhhhcccccCCChhHHHHHHHHhCCHH--HHHHHHhhhC
Q 047180 301 QQLARPMYSNPPVHGALIVSTILGDAE--LKKLWLKEVQ 337 (337)
Q Consensus 301 ~~~~~~~~~~~~~~~q~~~~~~l~~~~--~~~~w~~el~ 337 (337)
......+|+.+.|-++.+.|+.-. =.-+|+++|+
T Consensus 320 ---ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~ 355 (472)
T KOG0634|consen 320 ---AEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLR 355 (472)
T ss_pred ---cceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334456799999999999998521 1247887763
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.95 E-value=3.9e-26 Score=223.26 Aligned_cols=271 Identities=11% Similarity=0.039 Sum_probs=182.2
Q ss_pred CCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccch---HHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHH
Q 047180 30 VEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLE---CVREAERR-IAGTANMEYLPMGGSVKMVEETLKL 105 (337)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~---~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~ 105 (337)
++......+....+.+++ .+.++++|++|.+.. +..++. +++++..+ +.. ...+|++..|.++||++++++
T Consensus 16 v~~~~~~~~~~~~~~l~~-~g~~~~~L~~g~p~~---D~~tds~t~a~~~a~~~a~~~-g~~~Y~~~~g~~~Lreaia~~ 90 (460)
T PRK13238 16 VEPIRLTTREERERALAE-AGYNPFLLKSEDVFI---DLLTDSGTGAMSDRQWAAMMR-GDEAYAGSRSYYRLEDAVKDI 90 (460)
T ss_pred eccccccCHHHHHHHHHH-cCCCEEeCCCCCCCC---CCCCCCCchhhhHHHHHHHHh-CCcccCCCCCHHHHHHHHHHH
Confidence 444433333344444433 345899999998631 122222 45555433 322 245799999999999999999
Q ss_pred HhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccC------CCC
Q 047180 106 AYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHP------GTK 179 (337)
Q Consensus 106 ~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~------~~~ 179 (337)
+... . ++.|.||++|+.+++.++.+ ||| |++++|.|+.|...++.+|++++.+++... +.|
T Consensus 91 ~~~~--------~--vv~t~ggt~A~~~~~~all~--pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f 157 (460)
T PRK13238 91 FGYP--------Y--TIPTHQGRAAEQILFPVLIK--KGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPF 157 (460)
T ss_pred hCCC--------c--EEECCCHHHHHHHHHHHhCC--CCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccc
Confidence 7322 2 57899999999999887766 999 999999999999999999999999988421 234
Q ss_pred C--CChHHHHHHHHcCC-CCeEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeEEcccC--CCCCCCCCc---cch
Q 047180 180 G--LDFAALMDDIKNAP-NGSFFLLHACAHNPTG-VDPSEEQWKEISYQIKAKGHFPFFDMAY--QGFASGDPE---RDA 250 (337)
Q Consensus 180 ~--~d~~~l~~~l~~~~-~~~~ili~~~p~NPTG-~~~s~~~~~~l~~~~~~~~~~ii~De~Y--~~~~~~~~~---~~~ 250 (337)
. +|++++++.++... +++.++++++|||||| .+++.+++++|.++|++||++||+|+++ ....+..-. ...
T Consensus 158 ~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~ 237 (460)
T PRK13238 158 KGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKD 237 (460)
T ss_pred cCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccC
Confidence 4 99999999987432 2345555689999998 9999999999999999999999999965 222221000 000
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccc-----eeEeeeCCHHHHHHHHHHHHhhh-cccccCCChhHHHHHHHHhC
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVG-----CLSVLCEDEKQAVAVKSQLQQLA-RPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG-----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~~~~~~l~ 324 (337)
.++.. -+..+.|++|.+.++|||+| ++++ ++++++.++++...-... ..++++.+...|.+++..|.
T Consensus 238 ~si~~------i~~~~~s~~D~~~~Sg~K~g~~~~GG~i~-~~d~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~ 310 (460)
T PRK13238 238 KSIKE------IAREMFSYADGLTMSAKKDAMVNIGGLLC-FRDEDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLY 310 (460)
T ss_pred CCHHH------HhhhhcccCcEEEEecccCCCCcceeEEE-cChHHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHH
Confidence 11111 13445899999999999985 3333 244666665543211001 12455555666777776665
Q ss_pred C
Q 047180 325 D 325 (337)
Q Consensus 325 ~ 325 (337)
+
T Consensus 311 e 311 (460)
T PRK13238 311 E 311 (460)
T ss_pred H
Confidence 3
No 110
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=3.7e-26 Score=208.72 Aligned_cols=257 Identities=19% Similarity=0.184 Sum_probs=193.3
Q ss_pred ccchHHHHHHHHh-c-CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCe
Q 047180 69 VVLECVREAERRI-A-GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ 146 (337)
Q Consensus 69 ~~~~~v~~a~~~~-~-~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~ 146 (337)
++.+++++|..-+ . .+....|+.++|++-.|+.+|+|+.+|++..-++++ +..|.|++.|+..++.++.. .+.+.
T Consensus 87 fp~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~d--I~LT~GAS~ai~~il~l~~~-~~~~G 163 (475)
T KOG0258|consen 87 FPTDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPED--IFLTTGASPAIRSILSLLIA-GKKTG 163 (475)
T ss_pred CCHHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHH--eeecCCCcHHHHHHHHHHhc-CCCCc
Confidence 3445566666555 2 235668999999999999999999998874345555 58999999999999877664 27899
Q ss_pred EEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC---CeEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 047180 147 IYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN---GSFFLLHACAHNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 147 Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~ili~~~p~NPTG~~~s~~~~~~l~~ 223 (337)
|++|-|.||.|...+...|+..++|-+.++.+|.+|.++|+..+.++.+ .+++++ -||.||||.|+|++-+++|+.
T Consensus 164 vliPiPQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvv-INPGNPTGqvls~e~ie~i~~ 242 (475)
T KOG0258|consen 164 VLIPIPQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVV-INPGNPTGQVLSEENIEGIIC 242 (475)
T ss_pred eEeecCCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEE-ECCCCccchhhcHHHHHHHHH
Confidence 9999999999999999999999999887777899999999988776421 123333 469999999999999999999
Q ss_pred HHHhcCceeEEcccCCCCCCCCCccchHHHHH-hhhc---C---CeEEEEecccccc-cccccccceeEeeeCCHHHHHH
Q 047180 224 QIKAKGHFPFFDMAYQGFASGDPERDAKAIRI-FLKD---G---HLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 224 ~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~---~---~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~ 295 (337)
+|.+++++++.||+|++.++.+. ....+.+. +.+. . ..++.++|.||.| |=.|.|-||+-+..-+++..+.
T Consensus 243 fa~~~~l~llaDEVYQ~Nvy~~~-skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~q 321 (475)
T KOG0258|consen 243 FAAEEGLVLLADEVYQDNVYTTG-SKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQ 321 (475)
T ss_pred HHHHcCeEEechHHHHhhccCCC-cchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHH
Confidence 99999999999999999886531 11222221 1111 1 2456678999996 7789999999887667776655
Q ss_pred HHHHHHhhhcccccCCChhHHHHHHHHhCCH----HHHHHHHhh
Q 047180 296 VKSQLQQLARPMYSNPPVHGALIVSTILGDA----ELKKLWLKE 335 (337)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~----~~~~~w~~e 335 (337)
+.+ +.. .--|++.-+|..+....+.| ...++|.+|
T Consensus 322 i~K----l~s-i~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~E 360 (475)
T KOG0258|consen 322 IKK----LAS-IKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSE 360 (475)
T ss_pred HHH----HHh-hhhcCCccchhhhceecCCCCCCCcchhhhhhh
Confidence 544 211 22367888999888877754 234555444
No 111
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=1.1e-24 Score=204.96 Aligned_cols=250 Identities=20% Similarity=0.205 Sum_probs=178.5
Q ss_pred eEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHH
Q 047180 54 VNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACR 132 (337)
Q Consensus 54 i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~ 132 (337)
+||+.|.+. +.+.+.+.++..+. .......|.+..|..++++.+++++....+....++ .+++++|+++++.
T Consensus 1 ~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~--~~~~~~~~t~a~~ 73 (350)
T cd00609 1 IDLSIGEPD-----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPE--EIVVTNGAQEALS 73 (350)
T ss_pred CCCCCCCCC-----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcc--eEEEecCcHHHHH
Confidence 467777653 33444444443322 233456788899999999999999865432111122 4678999999999
Q ss_pred HHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCCh--HHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 133 LFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDF--AALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 133 ~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~--~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
.++..+.. +||+|++++|+|+.+..+++..|.+++.++..+. ...+. +.++.... +..+++++ ++|+||||
T Consensus 74 ~~~~~~~~--~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~--~~~~~v~i-~~~~~~tG 146 (350)
T cd00609 74 LLLRALLN--PGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE--GGFLLDLELLEAAKT--PKTKLLYL-NNPNNPTG 146 (350)
T ss_pred HHHHHhCC--CCCEEEEcCCCchhHHHHHHHCCCEEEEEecccc--cCCccCHHHHHhhcC--ccceEEEE-ECCCCCCC
Confidence 98887765 8999999999999999999999999999987432 33333 44443322 33345555 56999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|+++|+++|+++|+|++|.++..... . . ............+++.|+||.++++|.|+||+++ +++
T Consensus 147 ~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~-~-~-~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~--~~~ 221 (350)
T cd00609 147 AVLSEEELEELAELAKKHGILIISDEAYAELVYDGE-P-P-PALALLDAYERVIVLRSFSKTFGLPGLRIGYLIA--PPE 221 (350)
T ss_pred cccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCc-c-c-ccccCcCccCcEEEEeecccccCCcccceEEEec--CHH
Confidence 999999999999999999999999999998764311 1 0 0001112234688899999999999999999986 333
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++.+.+.. .......+++..+|.++..+|...
T Consensus 222 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~ 253 (350)
T cd00609 222 ELLERLKK----LLPYTTSGPSTLSQAAAAAALDDG 253 (350)
T ss_pred HHHHHHHH----HHHhcccCCChHHHHHHHHHHhCc
Confidence 55555543 233334578889999999999875
No 112
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=8.5e-25 Score=190.55 Aligned_cols=196 Identities=18% Similarity=0.151 Sum_probs=152.7
Q ss_pred cccCceeEEeeccchhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc
Q 047180 114 IKDKRIAAVQSLSGTGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN 192 (337)
Q Consensus 114 ~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~ 192 (337)
+..++ +..-.|+.+.+.+++++... || ++|+.-.|+|+.|.-.+...+++++.+|+. + +|.+|.|.+.+.++.
T Consensus 84 Lt~dn--ic~GvGsDE~ID~iiR~~c~--PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~-p-dF~lnvdai~evl~~ 157 (375)
T KOG0633|consen 84 LTSDN--ICVGVGSDELIDLIIRCVCD--PGKEKILDCPPTYSMYVVDAAINDAEVVKVPLN-P-DFSLNVDAIAEVLEL 157 (375)
T ss_pred CCccc--eEEecCcHHHHHHHHhheec--CCccceeecCCcceeEEEEeecCCceEEEecCC-C-CccccHHHHHHHHhc
Confidence 44555 46778889999999988777 99 999999999999998889999999999984 3 699999999998876
Q ss_pred CCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccc
Q 047180 193 APNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKN 272 (337)
Q Consensus 193 ~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 272 (337)
... ..+++.+||+||||..+..+++++|++--. +.+||.||+|.+|.- .+. ...+....+|++++++|||+
T Consensus 158 ds~-iK~~F~tSPgNPtg~~ik~~di~KiLe~p~--nglVVvDEAYidFsg---~~S---~~~lV~kYpNLivlqTlSKs 228 (375)
T KOG0633|consen 158 DSK-IKCIFLTSPGNPTGSIIKEDDILKILEMPD--NGLVVVDEAYIDFSG---VES---RMKLVKKYPNLIVLQTLSKS 228 (375)
T ss_pred ccc-ceEEEEcCCCCCCcccccHHHHHHHHhCCC--CcEEEEeeeeEeecc---ccc---cchHhHhCCceeehhhhhhh
Confidence 433 344555999999999999999999987554 789999999999963 121 22345567899999999999
Q ss_pred ccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC--HHHHHHHH
Q 047180 273 MGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD--AELKKLWL 333 (337)
Q Consensus 273 ~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~w~ 333 (337)
||++|+|+||...+. .+.+.|..+. ..+ +.+..+..++..+|++ .++.+..+
T Consensus 229 fGLAGiRvG~~~~~~-------~ia~iln~~K-aPY-NiS~~~s~~AL~Als~~n~kkme~~r 282 (375)
T KOG0633|consen 229 FGLAGIRVGYGAFPL-------SIAEILNRAK-APY-NISVAGSVAALAALSDSNGKKMEDVR 282 (375)
T ss_pred cCcceeEeecccccH-------HHHHHHHhcc-CCc-cccchhHHHHHHhcCcccchHHHHHH
Confidence 999999999987642 2334344433 234 5778889999999994 34434433
No 113
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.90 E-value=1.3e-22 Score=196.20 Aligned_cols=223 Identities=13% Similarity=0.090 Sum_probs=158.9
Q ss_pred CCCeeEeeeeeeecCCCCcccc---hHHHHH-HHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeec
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVL---ECVREA-ERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSL 125 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~---~~v~~a-~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 125 (337)
+-+.+.|..|.+..+ ..+. .++.++ ...+..+. ..|+++.|.++|++++++++ +.. .++.|+
T Consensus 10 g~n~~~l~~~~v~iD---lltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~-g~~---------~vv~t~ 75 (431)
T cd00617 10 GYNVFLLRSEDVYID---LLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLF-GFK---------HIIPTH 75 (431)
T ss_pred CCCEEeCCCCCcCCC---CCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHH-CCC---------eEEEcC
Confidence 346788888865322 2121 234333 23332222 35999999999999999987 331 257899
Q ss_pred cchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCC--------CCCCChHHHHHHHHcC-CCC
Q 047180 126 SGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPG--------TKGLDFAALMDDIKNA-PNG 196 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~--------~~~~d~~~l~~~l~~~-~~~ 196 (337)
||++|+.+++.++.+ |||+| +++|+|+.|...++.+|++++.+++.... .+.+|++++++.+++. ..+
T Consensus 76 ~Gt~Al~la~~al~~--pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~ 152 (431)
T cd00617 76 QGRGAENILFSILLK--PGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAEN 152 (431)
T ss_pred CHHHHHHHHHHHhCC--CCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCC
Confidence 999999999887766 99988 69999999999999999999999884322 2349999999998743 122
Q ss_pred eEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCceeEEcccCCC--CCC----CCCccchHHHHHhhhcCCeEEEEecc
Q 047180 197 SFFLLHACAHNPT-GVDPSEEQWKEISYQIKAKGHFPFFDMAYQG--FAS----GDPERDAKAIRIFLKDGHLLGLAQSY 269 (337)
Q Consensus 197 ~~ili~~~p~NPT-G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~--~~~----~~~~~~~~~~~~~~~~~~~~i~~~S~ 269 (337)
..++++++||||| |.+++.+++++|.++|++||++||+|++..- ..+ ++... ..++. +.++.+.|+
T Consensus 153 ~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~-~~si~------ei~~e~~s~ 225 (431)
T cd00617 153 IPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYR-DKSIA------EIAREMFSY 225 (431)
T ss_pred ccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhccccccc-CCCHH------HHHHHhhcc
Confidence 3445557999998 9999999999999999999999999999321 111 00000 11111 224557899
Q ss_pred cccccccccc------cceeEeeeCCHHHHHHHHH
Q 047180 270 AKNMGLYGQR------VGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 270 SK~~~~~G~R------vG~~~~~~~~~~~~~~~~~ 298 (337)
||.+.|.||| -||++. +++++.++++.
T Consensus 226 sd~~~mS~~K~~~~~~GG~i~~--~d~~l~~~~~~ 258 (431)
T cd00617 226 ADGCTMSAKKDGLVNIGGFLAL--RDDELYEEARQ 258 (431)
T ss_pred CCEEEEEeecCCCCccceEEEe--CcHHHHHHHHH
Confidence 9999999999 457765 55667777654
No 114
>PRK07049 methionine gamma-lyase; Validated
Probab=99.89 E-value=1.4e-21 Score=189.77 Aligned_cols=196 Identities=17% Similarity=0.116 Sum_probs=143.6
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~ 169 (337)
-...|.+.+|++. +. + .++++.||++++.+++..+.. |||+|++++|+|+.|...+ +..|.+++
T Consensus 84 t~~~Le~~lA~le-g~-------~--~~iv~~sG~~Ai~~~l~al~~--~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v 151 (427)
T PRK07049 84 NSEIVEDRLAVYE-GA-------E--SAALFSSGMSAIATTLLAFVR--PGDVILHSQPLYGGTETLLAKTFRNFGVGAV 151 (427)
T ss_pred CHHHHHHHHHHHh-CC-------C--cEEEEccHHHHHHHHHHHHhC--CCCEEEEcCCCcccHHHHHHHHHHhcCcEEE
Confidence 4578999999976 31 1 246889999999988877766 9999999999999997664 56788877
Q ss_pred EeeeccCCCCCCChHHHHHHHHcC--CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh---cCceeEEcccCCCCCCC
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNA--PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKA---KGHFPFFDMAYQGFASG 244 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~---~~~~ii~De~Y~~~~~~ 244 (337)
.++. ..|++.+++.+.+. ..+..+++++|||||||.+++.+++.+|++.|.+ ++++||+||+|......
T Consensus 152 ~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~ 225 (427)
T PRK07049 152 GFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQ 225 (427)
T ss_pred EEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccC
Confidence 7752 24677777666421 1223444458999999999999999999998765 68999999998765321
Q ss_pred CCccchHHHHHhhhcCCeEEEEeccccccc-ccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHh
Q 047180 245 DPERDAKAIRIFLKDGHLLGLAQSYAKNMG-LYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTIL 323 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l 323 (337)
. ++ .. ...++++||||.|| .+|+|+||++. ++++++++.. +......+.+.+.|.++...|
T Consensus 226 ---~---pl----~~-g~divv~S~SK~~gG~~glr~G~vv~---~~~l~~~l~~----~~~~~g~~ls~~~a~l~~r~L 287 (427)
T PRK07049 226 ---K---PL----EH-GADLSVYSLTKYVGGHSDLVAGAVLG---RKALIRQVRA----LRSAIGTQLDPHSCWMLGRSL 287 (427)
T ss_pred ---C---cc----cc-CCCEEEEcCceeecCCCCcEEEEEEC---CHHHHHHHHH----HHHhcCCCCCHHHHHHHHcCC
Confidence 1 11 11 24688899999999 79999999874 5665555543 222233457888899888888
Q ss_pred CC
Q 047180 324 GD 325 (337)
Q Consensus 324 ~~ 325 (337)
+.
T Consensus 288 ~t 289 (427)
T PRK07049 288 ET 289 (427)
T ss_pred Ch
Confidence 75
No 115
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=1.6e-21 Score=173.24 Aligned_cols=262 Identities=18% Similarity=0.183 Sum_probs=181.3
Q ss_pred chhhHHHHHhcC-CCCCeeEeeeeeeecCCCCcccchHHHHHHHH----h-cC----cCCCCCCCCCCCHHHHHHHHHHH
Q 047180 37 PILGVTEAFLAD-PSPDKVNVGVGAYRDDNGKPVVLECVREAERR----I-AG----TANMEYLPMGGSVKMVEETLKLA 106 (337)
Q Consensus 37 ~~~~~~~~~~~~-~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~----~-~~----~~~~~Y~~~~G~~~lr~aia~~~ 106 (337)
.+.++++++... ..+..|.|+.|. |...|++.+..+. + .. +..-.|..++|...|.++++..+
T Consensus 15 Gi~~lMdDl~d~Lrt~g~imLggGN-------Pa~iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l 87 (417)
T COG3977 15 GITQLMDDLNDGLRTPGAIMLGGGN-------PARIPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKML 87 (417)
T ss_pred hHHHHHHHHHhhccCCCceeeCCCC-------cccChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHH
Confidence 356777666542 235689999873 5555666544433 2 11 23457999999999999999999
Q ss_pred hCCCCcccccCceeEEeeccchhHHHHHHHHHhhhC-CC--CeEEEc-CCCCcchHHHHHhcCce---eeEee----ecc
Q 047180 107 YGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFH-PD--SQIYIP-VPTWSNHHNIWRDAHVT---QRTFH----YYH 175 (337)
Q Consensus 107 ~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~-pg--d~Vlv~-~P~y~~y~~~~~~~G~~---~~~~~----~~~ 175 (337)
.++++|.+.+.+| .+|+|++.+...++.++.-.. .| ..|++| .|-|-+|..+ |.+ .|.+. +.+
T Consensus 88 ~~~ygwnit~~NI--alTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~----~l~~d~fVs~kP~iel~~ 161 (417)
T COG3977 88 RREYGWNITAQNI--ALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADA----GLEEDLFVSAKPNIELLP 161 (417)
T ss_pred HHHhCCCCcccee--eecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccccc----ccCccceeeccCCccccc
Confidence 8888998988775 689999999999998886422 34 355555 6777777532 222 22221 111
Q ss_pred C--CCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 176 P--GTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 176 ~--~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
+ -.+..|++++.- . .....++..-|.||||.|+|.+|+.+|.++|++|++.+|.|.+|.-=..+-..++.
T Consensus 162 ~g~FKY~vDF~~l~i--~---e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~--- 233 (417)
T COG3977 162 AGQFKYHVDFEHLHI--G---ESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDA--- 233 (417)
T ss_pred ccceeeccCHHHccc--c---cccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceecccc---
Confidence 1 136778887753 2 22344555889999999999999999999999999999999999642111000111
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHH
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELK 329 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~ 329 (337)
.. -.++|++.|.|+|| .|+||.|+|.+++ |+++++.+. .+.......|+.+++.+++.+++.+++.
T Consensus 234 ~~--~w~~NiilC~SLSK-~GLPG~R~GIiIa---ne~viqait----nmn~iisLap~~~G~Aia~~mie~gdl~ 299 (417)
T COG3977 234 TP--LWNENIILCMSLSK-LGLPGSRCGIIIA---NEKVIQAIT----NMNGIISLAPGRMGPAIAAEMIESGDLL 299 (417)
T ss_pred cc--cCCCCEEEEeehhh-cCCCCcceeEEEc---cHHHHHHHH----hccceeeecCCCccHHHHHHHhhcchHH
Confidence 11 12579999999999 6899999999874 777665543 3333334468899999999999987754
No 116
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.87 E-value=1.8e-20 Score=177.74 Aligned_cols=215 Identities=13% Similarity=0.041 Sum_probs=140.8
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC--cCCCCCCCCCC----CHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG--TANMEYLPMGG----SVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~--~~~~~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
+.+.|||+.|.+. + +..++.+.++..+ +.. .....|....| ..++++++++|+ +. ++ .++
T Consensus 15 g~~~id~~~~~~~---g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-~~------~~--~i~ 81 (360)
T TIGR00858 15 GRRLLNFSSNDYL---G-LASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWK-GT------EA--ALL 81 (360)
T ss_pred CceEEecccCCcc---c-CCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC------CC--EEE
Confidence 3568999998432 1 2344667666654 321 11112222234 345888898886 21 22 234
Q ss_pred eeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC-CCeEEEE
Q 047180 123 QSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP-NGSFFLL 201 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~ili 201 (337)
.+.| ++++..++..+.. |||+|++++|+|+.+...++..|.+++.++. +|++.+++.+.... .++.+++
T Consensus 82 ~~~G-~~~~~~~l~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~ 151 (360)
T TIGR00858 82 FSSG-YLANVGVISALVG--KGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIV 151 (360)
T ss_pred ECch-HHHHHHHHHHhCC--CCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEE
Confidence 5555 5554455555544 8999999999999999999999999887653 57888988886432 2345666
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccc
Q 047180 202 HACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVG 281 (337)
Q Consensus 202 ~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 281 (337)
+++++||||...+ +++|+++|++++++||+||+|..+.++...........+ ...+++++++||||.||++| |
T Consensus 152 ~~~~~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~~~i~i~s~sK~~~~~g---G 224 (360)
T TIGR00858 152 TDGVFSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGL-KPEPVDIQVGTLSKALGSYG---A 224 (360)
T ss_pred EeCCccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCC-CccCCcEEEEechhhhhccC---c
Confidence 6889999998766 677888999999999999999865433110111111101 11357899999999999877 9
Q ss_pred eeEeeeCCHHHHHHHH
Q 047180 282 CLSVLCEDEKQAVAVK 297 (337)
Q Consensus 282 ~~~~~~~~~~~~~~~~ 297 (337)
|+++ +++.++.+.
T Consensus 225 ~~~~---~~~~~~~~~ 237 (360)
T TIGR00858 225 YVAG---SQALIDYLI 237 (360)
T ss_pred EEEc---CHHHHHHHH
Confidence 9875 455555443
No 117
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.87 E-value=1.6e-20 Score=180.83 Aligned_cols=212 Identities=12% Similarity=0.089 Sum_probs=147.1
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCC---CC----HHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMG---GS----VKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~---G~----~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
.+.|||+.|.|.+ ...+|.+.++..+ +... ..+|+++. |. .+|++++|+++ +. +. .+
T Consensus 38 ~~~i~~~~~~~lg----~~~~~~v~~~~~~~~~~~-~~~~~~s~~~~G~~~~~~~le~~ia~~~-g~-------~~--~i 102 (393)
T TIGR01822 38 REVLNFCANNYLG----LSSHPDLIQAAKDALDEH-GFGMSSVRFICGTQDIHKELEAKIAAFL-GT-------ED--TI 102 (393)
T ss_pred ceEEEeeCCCccc----cCCCHHHHHHHHHHHHHh-CCCCCCcCcccCChHHHHHHHHHHHHHh-CC-------Cc--EE
Confidence 4689999997642 3345566655444 3221 23677766 86 78999999987 32 11 36
Q ss_pred eeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCeEE
Q 047180 123 QSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFF 199 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~i 199 (337)
++.||++|+..++..+.. |||+|++++|+|+.+...++..+.+.+.++ ..|++.+++.+.+. ..+.++
T Consensus 103 i~~~~~~a~~~~~~~l~~--~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~ 173 (393)
T TIGR01822 103 LYASCFDANGGLFETLLG--AEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRL 173 (393)
T ss_pred EECchHHHHHHHHHHhCC--CCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceE
Confidence 778889998888777655 999999999999999998888887765432 36889998888742 113456
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEeccccccccccc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQ 278 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~ 278 (337)
++.++++||||.+.+ +++|+++|++||++||+||+|..-..+ . ... ........ .+..+++.||||.++ |+
T Consensus 174 v~~~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~-~-~~~-~~~~~~~~~~~~di~~~s~sK~l~--g~ 245 (393)
T TIGR01822 174 IATDGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLG-P-TGR-GSHELCGVMGRVDIITGTLGKALG--GA 245 (393)
T ss_pred EEEeCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcC-C-CCC-chHHhcCCCCCCeEEEEEChHHhh--CC
Confidence 666788999999976 678899999999999999999521111 1 111 11111111 134588899999865 89
Q ss_pred ccceeEeeeCCHHHHHHHH
Q 047180 279 RVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 279 RvG~~~~~~~~~~~~~~~~ 297 (337)
|+||+++ ++++++.+.
T Consensus 246 r~G~~~~---~~~~~~~l~ 261 (393)
T TIGR01822 246 SGGFTTA---RKEVVELLR 261 (393)
T ss_pred CcEEEEe---CHHHHHHHH
Confidence 9999875 455555554
No 118
>PRK10534 L-threonine aldolase; Provisional
Probab=99.87 E-value=4.6e-21 Score=180.57 Aligned_cols=231 Identities=12% Similarity=-0.047 Sum_probs=146.6
Q ss_pred CCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCC
Q 047180 66 GKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDS 145 (337)
Q Consensus 66 ~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd 145 (337)
.+|.++|.+.+++.+... ....|+|..+..+|++++++++ |. +. .+++.||+++..+++.++.. |||
T Consensus 8 ~~~~p~~~~~~a~~~~~~-~~~~Y~~~~~~~~L~~~la~~~-g~-------~~--~~v~~~g~~a~~~~l~~~~~--~gd 74 (333)
T PRK10534 8 TVTRPSRAMLEAMMAAPV-GDDVYGDDPTVNALQDYAAELS-GK-------EA--ALFLPTGTQANLVALLSHCE--RGE 74 (333)
T ss_pred cCCCCCHHHHHHHHhccC-CCcccCCCHHHHHHHHHHHHHh-CC-------Ce--EEEeCchHHHHHHHHHHhcC--CCC
Confidence 346678888888765422 3456877778899999999985 32 11 25777888777766665554 899
Q ss_pred eEEEcCCCCcc-hHHH-HHhcC-ceeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCCCCCCCCCCCHHHHH
Q 047180 146 QIYIPVPTWSN-HHNI-WRDAH-VTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACAHNPTGVDPSEEQWK 219 (337)
Q Consensus 146 ~Vlv~~P~y~~-y~~~-~~~~G-~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p~NPTG~~~s~~~~~ 219 (337)
+|+++.|+|.. |... ....| ++++.+++ + +++.+|++++++++.+.. .++.++++|||| ||.+++.++++
T Consensus 75 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~ 150 (333)
T PRK10534 75 EYIVGQAAHNYLYEAGGAAVLGSIQPQPIDA-A-ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLK 150 (333)
T ss_pred eeEEechhhhhHhcCCchHHhcCceEEeecC-C-CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHH
Confidence 99999998853 4321 23444 67777776 3 358899999998875310 023344447554 69999999999
Q ss_pred HHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHH
Q 047180 220 EISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQ 299 (337)
Q Consensus 220 ~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~ 299 (337)
+|+++|++++++|++||+|.......... ....+....++++ .||||.||++ +||.++ .++++++++...
T Consensus 151 ~i~~~~~~~~~~lvvDEA~~~~~~~~~~~---~~~~~~~~~~~~~--~s~SK~~~~~---~G~~~~--~~~~~i~~~~~~ 220 (333)
T PRK10534 151 QAWEFTRERNLALHVDGARIFNAVVAYGC---ELKEITQYCDSFT--ICLSKGLGTP---VGSLLV--GNRDYIKRARRW 220 (333)
T ss_pred HHHHHHHHcCCeEEeeHHHHHHHHHHcCC---CHHHHHhcCCEEE--EEeEcCCCCc---ccceEE--cCHHHHHHHHHH
Confidence 99999999999999999986221000001 1122222123333 3899999874 895333 367776666432
Q ss_pred HHhhhcccccCCChhHHHHHHHHhCC
Q 047180 300 LQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 300 l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
.... ...+ +.+.+.|.++...|++
T Consensus 221 ~~~~-~~~~-~~~~~~~a~~~~~l~~ 244 (333)
T PRK10534 221 RKMT-GGGM-RQAGILAAAGLYALKH 244 (333)
T ss_pred HHHh-CCch-hhHHHHHHHHHHHHHh
Confidence 1110 0011 2344667777777764
No 119
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.87 E-value=2e-20 Score=176.26 Aligned_cols=229 Identities=15% Similarity=0.006 Sum_probs=155.4
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEE
Q 047180 69 VVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIY 148 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vl 148 (337)
.+++.+.+++.+.... ...|.+..+..++++.+++++. . ++ ++++.||++++.+++..+.. +||+|+
T Consensus 9 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~~a~~~g-~-------~~--~~~~~~gt~a~~~~~~~l~~--~gd~v~ 75 (338)
T cd06502 9 GPTPEMLEAMAAANVG-DDVYGEDPTTAKLEARAAELFG-K-------EA--ALFVPSGTAANQLALAAHTQ--PGGSVI 75 (338)
T ss_pred CCCHHHHHHHHhcccC-CcccCCCHHHHHHHHHHHHHhC-C-------Ce--EEEecCchHHHHHHHHHhcC--CCCeEE
Confidence 3667788877653111 2367777778889999998863 1 12 46788888999888877765 899999
Q ss_pred EcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC----CCeEEEEeCCCCCCCCCCCCHHHHHHH
Q 047180 149 IPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP----NGSFFLLHACAHNPTGVDPSEEQWKEI 221 (337)
Q Consensus 149 v~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~----~~~~ili~~~p~NPTG~~~s~~~~~~l 221 (337)
++.|+|+.+.. ..+..|++++.++. + .+.+|++++++.+.+.. .++.++++|+|||| |.+++.+++++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i 151 (338)
T cd06502 76 CHETAHIYTDEAGAPEFLSGVKLLPVPG-E--NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAI 151 (338)
T ss_pred EecCcceeeecCCcHHHHcCceEEeecC-C--CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHH
Confidence 99999986432 34568999999886 3 36799999999886421 13345556899998 777899999999
Q ss_pred HHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHH
Q 047180 222 SYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQ 301 (337)
Q Consensus 222 ~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~ 301 (337)
+++|+++++++|+||+|..+....... ++..+. .+.+ +++.|+||.|+++| |++++ .++++++++.....
T Consensus 152 ~~~~~~~~~~livDea~~~~~~~~~~~---~~~~~~-~~~d-~~~~s~sK~~~~~~---g~~~~--~~~~~~~~~~~~~~ 221 (338)
T cd06502 152 SALAKENGLPLHLDGARLANAAAALGV---ALKTYK-SGVD-SVSFCLSKGGGAPV---GAVVV--GNRDFIARARRRRK 221 (338)
T ss_pred HHHHHHcCCeEeechHHHHHHHHhcCC---CHHHHH-hcCC-EEEEeccccCCCcc---ceEEE--CCHHHHHHHHHHHH
Confidence 999999999999999986432100001 111121 1233 45779999999987 65443 46666666543211
Q ss_pred hhhcccccCCChhHHHHHHHHhCCH
Q 047180 302 QLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 302 ~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
.. ...+ +.+.+.|.++..+|++.
T Consensus 222 ~~-~~~~-~~~~~~~~a~~~~L~~~ 244 (338)
T cd06502 222 QA-GGGM-RQSGFLAAAGLAALEND 244 (338)
T ss_pred Hh-CCCh-hhHHHHHHHHHHHhcCc
Confidence 11 1112 34567788888888864
No 120
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.86 E-value=4.3e-20 Score=177.23 Aligned_cols=242 Identities=13% Similarity=0.120 Sum_probs=158.2
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC-c-CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG-T-ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~-~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
+.+.+||+.|.+. ...+++.+.++..+ +.. . ....|.+..|.+++++++++++....+. ++ .+++|.|
T Consensus 32 g~~~id~~~~~~~----g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~--~i~~~sG 102 (385)
T TIGR01825 32 GKEVINLSSNNYL----GFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EA--ALVFQSG 102 (385)
T ss_pred CceEEEeeccCcc----CCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---Cc--EEEECcH
Confidence 3568999987532 23345566665544 321 2 2346878899999999999998554321 22 2455555
Q ss_pred chhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC-CCeEEEEeCCC
Q 047180 127 GTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP-NGSFFLLHACA 205 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~ili~~~p 205 (337)
+++...++..+.. |||.|++++|+|+.+...++..|.+++.++ .+|++++++.+.+.. .++.+++.+++
T Consensus 103 -~~a~~~a~~~~~~--~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v 172 (385)
T TIGR01825 103 -FNTNQGVLSALLR--KGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGV 172 (385)
T ss_pred -HHHHHHHHHHhCC--CCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecC
Confidence 5666666666555 899999999999999988888888776542 467888888776432 23455566888
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+||||.+.+ +++|+++|++|++++|+||+|..+.++.. .......+.-..+.++++.||||.||++| ||++.
T Consensus 173 ~~~tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~~~~ 244 (385)
T TIGR01825 173 FSMDGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEA--GRGTVHHFGLEDKVDIQVGTLSKAIGVVG---GYAAG 244 (385)
T ss_pred CcCCCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCC--CCccHhhcCCCcCCcEEEEeccHHhhcCC---CEEec
Confidence 999999887 67799999999999999999977654311 11111111111356888999999998766 99864
Q ss_pred eeCCHHHHHHHHHHHHhhhcccccC-CChhHHHHHHHHhC
Q 047180 286 LCEDEKQAVAVKSQLQQLARPMYSN-PPVHGALIVSTILG 324 (337)
Q Consensus 286 ~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~q~~~~~~l~ 324 (337)
+++.++.+..... ....++ .+...|.++..+++
T Consensus 245 ---~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~al~ 278 (385)
T TIGR01825 245 ---HKELIEYLKNRAR---PFLFSTAQPPAVVAALAAAVD 278 (385)
T ss_pred ---CHHHHHHHHHhCc---cccccCCCCHHHHHHHHHHHH
Confidence 5555555543111 111222 34455666555553
No 121
>PLN02721 threonine aldolase
Probab=99.85 E-value=5.1e-20 Score=174.48 Aligned_cols=215 Identities=19% Similarity=0.135 Sum_probs=140.4
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.+++|+.+.+ +.+++.+.+++... ......+|.|. ..+|++++++|+... . .+++.+|+++
T Consensus 6 ~~~~~~~~~~------~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~l~~~la~~~~~~--------~--~~~~~~Gs~a 67 (353)
T PLN02721 6 RVVDLRSDTV------TKPTDAMRAAMANAEVDDDVLGYDPT--ALRLEEEMAKIFGKE--------A--ALFVPSGTMG 67 (353)
T ss_pred hhhhhhcccc------cCCCHHHHHHHHhccCCCcccCCCHH--HHHHHHHHHHHhCCc--------e--eEEecCccHH
Confidence 4678888754 34567777777653 22223445443 689999999997321 1 2455666666
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcc-hHH--HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC-----CCCeEEEEe
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSN-HHN--IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA-----PNGSFFLLH 202 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~-y~~--~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~-----~~~~~ili~ 202 (337)
...++.++.. .+||+|++++|+|.. |.. .++..|++++.+|. +. ++.+|++.+++.+.+. ++.+++++.
T Consensus 68 ~~~~l~~~~~-~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~ 144 (353)
T PLN02721 68 NLISVLVHCD-VRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKN-NE-DGTMDLDAIEAAIRPKGDDHFPTTRLICLE 144 (353)
T ss_pred HHHHHHHHcc-CCCCeEEEcCccceehhcccchhhhcCceeEecCC-Cc-CCCcCHHHHHHHHHhccCCCCCcceEEEEe
Confidence 5555444321 179999999999754 432 56788999999886 32 4678999999988632 234556665
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccce
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGC 282 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~ 282 (337)
+.||||||.+++.+++++|+++|+++|++||+||+|...... . .+. ....+....+. ++.||||.|+. ++|+
T Consensus 145 ~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~-~-~~~-~~~~~~~~~d~--~~~s~sK~l~~---~~G~ 216 (353)
T PLN02721 145 NTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASV-A-LGV-PVHRLVKAADS--VSVCLSKGLGA---PVGS 216 (353)
T ss_pred ccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchh-h-hCC-CHHHHhhhCCE--EEEecccccCC---ceee
Confidence 668999999999999999999999999999999987522110 0 000 11112222232 33479999873 4787
Q ss_pred eEeeeCCHHHHHHHH
Q 047180 283 LSVLCEDEKQAVAVK 297 (337)
Q Consensus 283 ~~~~~~~~~~~~~~~ 297 (337)
+++ .+++.++.+.
T Consensus 217 ~~~--~~~~~~~~~~ 229 (353)
T PLN02721 217 VIV--GSKSFIRKAK 229 (353)
T ss_pred EEe--cCHHHHHhHH
Confidence 443 4666655543
No 122
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.85 E-value=6.1e-20 Score=176.65 Aligned_cols=218 Identities=11% Similarity=0.011 Sum_probs=144.8
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCC---CCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeec
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEY---LPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSL 125 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y---~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 125 (337)
+.+.|||+.|.+. ...+++.+.++.++ +... ..+| ....|.+++|+++++++.+..+. ++. +++|.
T Consensus 41 g~~~i~l~~~~~~----~~~~~~~i~~a~~~~~~~~-~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~--i~~ts 110 (397)
T PRK06939 41 GKEVINFCANNYL----GLANHPELIAAAKAALDSH-GFGMASVRFICGTQDLHKELEEKLAKFLGT---EDA--ILYSS 110 (397)
T ss_pred CCeEEEeeccCcc----ccCCCHHHHHHHHHHHHHc-CCCCcccccccCCcHHHHHHHHHHHHHhCC---CcE--EEEcC
Confidence 4568999998643 13345666666554 3221 1233 33578888998888887554321 222 45555
Q ss_pred cchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEe
Q 047180 126 SGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLH 202 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~ 202 (337)
| ++++..++..+.. |||+|++++|+|+.+...++..|++++.++. .|++.+++.++.. ..+.++++.
T Consensus 111 G-~~a~~~~~~~l~~--~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~ 180 (397)
T PRK06939 111 C-FDANGGLFETLLG--KEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIAT 180 (397)
T ss_pred h-HHHHHHHHHHhCC--CCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEE
Confidence 5 7777777776655 9999999999999999999999998877653 4778888877531 123455555
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccce
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGC 282 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~ 282 (337)
.+.+||||.. +++++|+++|++++++||+||+|.....+ .. .......+.-.....++++||||.|+ |+|+||
T Consensus 181 ~~v~~~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~-~~-~~~~~~~~~~~~~~~i~~~S~sK~~~--g~r~G~ 253 (397)
T PRK06939 181 DGVFSMDGDI---APLPEICDLADKYDALVMVDDSHAVGFVG-EN-GRGTVEHFGVMDRVDIITGTLGKALG--GASGGY 253 (397)
T ss_pred ecCcCCCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcC-CC-CCCHHHHcCCCCCCcEEEEECHHHhC--ccCceE
Confidence 6679999984 45788999999999999999999521111 11 11111111111134688999999995 679999
Q ss_pred eEeeeCCHHHHHHHH
Q 047180 283 LSVLCEDEKQAVAVK 297 (337)
Q Consensus 283 ~~~~~~~~~~~~~~~ 297 (337)
+++ +++.++.+.
T Consensus 254 v~~---~~~~~~~l~ 265 (397)
T PRK06939 254 TAG---RKEVIDWLR 265 (397)
T ss_pred EEe---CHHHHHHHH
Confidence 985 355555554
No 123
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.85 E-value=1.4e-19 Score=171.33 Aligned_cols=191 Identities=15% Similarity=0.022 Sum_probs=134.8
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEc---CCCCcchHHHHHhcCceeeEe
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIP---VPTWSNHHNIWRDAHVTQRTF 171 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~---~P~y~~y~~~~~~~G~~~~~~ 171 (337)
..+|++.+|+|+ +. ++++ +++++||.+++..++..+.. |||+|+++ .|+|+.|...++..|++++.+
T Consensus 56 ~~~Le~~lA~~~-g~-----~~e~--ilv~~gg~~a~~~~~~al~~--~gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~ 125 (346)
T TIGR03576 56 EEKVQELGREHL-GG-----PEEK--ILVFNRTSSAILATILALEP--PGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES 125 (346)
T ss_pred HHHHHHHHHHHc-CC-----Ccce--EEEECCHHHHHHHHHHHhCC--CCCEEEECCCCCCCchhHHHHHHHcCCEEecc
Confidence 456677777765 22 2343 57899999999999988876 99999985 479999989999999876432
Q ss_pred eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchH
Q 047180 172 HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
.|++.++. .++++++++ +++||+|.+++.+++++|+++|++++++||+||+|..++.+.+.. .
T Consensus 126 ---------~~l~~l~~----~~~~~lIii--tg~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~--~ 188 (346)
T TIGR03576 126 ---------DELSELKK----IDGTSLVVI--TGSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQ--P 188 (346)
T ss_pred ---------CCHHHHhh----CcCceEEEE--ECCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCC--C
Confidence 13444322 223445555 357999999999999999999999999999999999875331111 1
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+.. ..+.+ +++.|||| +++|+|+||+++ ++++++.+.. ..+....+.+.+.|.++..+|++
T Consensus 189 ~~~---~~~~d-ivv~s~SK--alaG~r~G~v~~---~~~li~~l~~----~~~~~~~s~~~~~~~aa~~aL~~ 249 (346)
T TIGR03576 189 PAL---DLGAD-LVVTSTDK--LMDGPRGGLLAG---RKELVDKIKS----VGEQFGLEAQAPLLAAVVRALEE 249 (346)
T ss_pred CHH---HcCCc-EEEeccch--hccccceEEEEe---CHHHHHHHHH----hhcCcccCccHHHHHHHHHHHhh
Confidence 111 12233 56779999 678999999986 4555555443 33332223577799999999975
No 124
>PLN02242 methionine gamma-lyase
Probab=99.85 E-value=7.4e-20 Score=177.29 Aligned_cols=191 Identities=13% Similarity=0.098 Sum_probs=135.0
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-----hcCcee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-----DAHVTQ 168 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-----~~G~~~ 168 (337)
-..+|.+.+|++. +.. ..++++||++|+.+++..+.. |||+|++++|.|+.+...+. ..|.++
T Consensus 77 t~~~LE~~lA~l~-g~~---------~~l~~~sG~~Ai~~al~al~~--~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~ 144 (418)
T PLN02242 77 TVLNLGRQMAALE-GTE---------AAYCTASGMSAISSVLLQLCS--SGGHVVASNTLYGGTHALLAHFLPRKCNITT 144 (418)
T ss_pred hHHHHHHHHHHHh-CCC---------eEEEEccHHHHHHHHHHHHhC--CCCEEEEcCCcHHHHHHHHHHhhhhccCceE
Confidence 4567888899875 321 136789999999998877766 99999999999999977653 467776
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
+.++. .|++.+++++... +.++++ +++|+||||.++ ++++|+++|++++++||+|++|..+.++
T Consensus 145 ~~~d~-------~d~e~l~~~i~~~-~tklV~-lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~---- 208 (418)
T PLN02242 145 TFVDI-------TDLEAVKKAVVPG-KTKVLY-FESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLS---- 208 (418)
T ss_pred EEcCC-------CCHHHHHHhcCcC-CCEEEE-EecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCC----
Confidence 65543 3788998887531 234444 579999999998 4788899999999999999999876431
Q ss_pred chHHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
. ..+ + ..+++.||||.|+.+|+|+ ||+++ ++++++++...... .....+++...|.++..++.-
T Consensus 209 -~---~~~---g-~divv~S~SK~l~g~g~~~gG~iv~---~~~li~~l~~~~~~--~~~~~g~~~~~~~A~l~~~~l 273 (418)
T PLN02242 209 -P---ARL---G-ADVVVHSISKFISGGADIIAGAVCG---PAELVNSMMDLHHG--ALMLLGPTMNPKVAFELSERL 273 (418)
T ss_pred -H---HHc---C-CcEEEEeCccccCCCCCceEEEEEc---CHHHHHHHHHHhhh--hhhccCCCCCHHHHHHHHcCC
Confidence 1 111 2 4588899999999999985 88764 56666655432110 012334555567777666553
No 125
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.84 E-value=5.4e-19 Score=169.28 Aligned_cols=215 Identities=14% Similarity=0.037 Sum_probs=140.8
Q ss_pred CCCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC-c-CCCCCCCCCCC----HHHHHHHHHHHhCCCCcccccCceeE
Q 047180 49 PSPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG-T-ANMEYLPMGGS----VKMVEETLKLAYGDNSEFIKDKRIAA 121 (337)
Q Consensus 49 ~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~-~-~~~~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~i~~ 121 (337)
.+.+.|||+.|.+. .+.++|.+.+++.+ +.. . ....|....|. .++++++++++ +. ++ .
T Consensus 37 ~g~~~id~~~~~~~----g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-~~------~~---~ 102 (385)
T PRK05958 37 DGRRMLNFASNDYL----GLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWF-GA------ER---A 102 (385)
T ss_pred CCceEEEeeCCCcc----cCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHh-CC------Cc---E
Confidence 34678999987431 13345667776654 321 1 11223333454 45666666664 21 22 2
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEE
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLL 201 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili 201 (337)
+++++|+++...++..+.+ |||.|++++|+|+.+...++..|++++.++. .|++.+++.++..++++.+++
T Consensus 103 i~~~~g~~~~~~~l~~~~~--~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi 173 (385)
T PRK05958 103 LLFSSGYAANLAVLTALAG--KGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIV 173 (385)
T ss_pred EEECcHHHHHHHHHHHhCC--CCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEE
Confidence 4555666666555555544 8999999999999999999999999887764 378888888864322345566
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHh-hhcCCeEEEEeccccccccccccc
Q 047180 202 HACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIF-LKDGHLLGLAQSYAKNMGLYGQRV 280 (337)
Q Consensus 202 ~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~Rv 280 (337)
.++++||||...+ +++|+++|+++|+++|+||+|....++. ........+ ....++++++.||||.||++|
T Consensus 174 ~~~~~~~~G~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~--~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G--- 245 (385)
T PRK05958 174 TESVFSMDGDLAP---LAELVALARRHGAWLLVDEAHGTGVLGP--QGRGLAAEAGLAGEPDVILVGTLGKALGSSG--- 245 (385)
T ss_pred EEecccCCCCcCC---HHHHHHHHHHhCCEEEEECcccccccCC--CCCchHHhhCCCCCCceEEEEechhhcccCC---
Confidence 6789999998765 7788899999999999999997543321 111111111 112357899999999999877
Q ss_pred ceeEeeeCCHHHHHHHH
Q 047180 281 GCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 281 G~~~~~~~~~~~~~~~~ 297 (337)
||+++ +++..+.+.
T Consensus 246 g~~~~---~~~~~~~~~ 259 (385)
T PRK05958 246 AAVLG---SETLIDYLI 259 (385)
T ss_pred cEEEc---CHHHHHHHH
Confidence 88764 455555443
No 126
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.84 E-value=4.1e-19 Score=171.45 Aligned_cols=196 Identities=16% Similarity=0.055 Sum_probs=137.9
Q ss_pred CC--CCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----HH
Q 047180 89 YL--PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----WR 162 (337)
Q Consensus 89 Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~~ 162 (337)
|. +..+..+|+++++++..+ + . .+++++|++|+.+++..+.. |||+|+++.|.|+.+... ++
T Consensus 58 Y~r~~~p~~~~Le~~iA~~~g~-------~-~--~l~~~sG~~Ai~~al~~ll~--~Gd~Vl~~~~~y~~~~~~~~~~~~ 125 (400)
T PRK06234 58 YSRLGNPTSTEVENKLALLEGG-------E-A--AVVAASGMGAISSSLWSALK--AGDHVVASDTLYGCTFALLNHGLT 125 (400)
T ss_pred ccCCCCccHHHHHHHHHHHhCC-------C-c--EEEEcCHHHHHHHHHHHHhC--CCCEEEEecCccchHHHHHHHHHh
Confidence 55 667889999999998732 1 1 46889999999887766655 999999999999876544 46
Q ss_pred hcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CceeEEcccCCC
Q 047180 163 DAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK--GHFPFFDMAYQG 240 (337)
Q Consensus 163 ~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~--~~~ii~De~Y~~ 240 (337)
..|++++.++. .|++++++++.. +.++++ +++||||||.+.+ +++|+++|+++ ++++|+|++|..
T Consensus 126 ~~G~~v~~vd~-------~d~e~l~~~i~~--~tklI~-iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~ 192 (400)
T PRK06234 126 RYGVEVTFVDT-------SNLEEVRNALKA--NTKVVY-LETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCT 192 (400)
T ss_pred hCCeEEEEECC-------CCHHHHHHHhcc--CCeEEE-EECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCc
Confidence 68988888754 268889888853 334444 4899999999987 67778888886 999999999986
Q ss_pred CCCCCCccchHHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHH
Q 047180 241 FASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIV 319 (337)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~ 319 (337)
...+ . ++ .. ..-+++.|+||.++.+|+|+ ||+++ +++.+++++..-.. ...-.+.+.+...++
T Consensus 193 ~~~~---~---~l----~~-g~Divv~S~sK~l~g~g~~~gG~v~~---~~~~~~~l~~~~~~--~~~g~~l~p~~a~l~ 256 (400)
T PRK06234 193 PYIQ---R---PL----QL-GADVVVHSATKYLNGHGDVIAGFVVG---KEEFINQVKLFGIK--DMTGSVIGPFEAFLI 256 (400)
T ss_pred hhcC---C---ch----hh-CCcEEEeeccccccCCCCceeEEEEe---cHHHHHHHHHHHHH--HhcCCCCCHHHHHHH
Confidence 5432 1 11 11 23488899999999999986 88775 45565655431111 111123455555555
Q ss_pred HHHhCC
Q 047180 320 STILGD 325 (337)
Q Consensus 320 ~~~l~~ 325 (337)
..-|++
T Consensus 257 ~~~l~t 262 (400)
T PRK06234 257 IRGMKT 262 (400)
T ss_pred HhccCc
Confidence 555654
No 127
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.83 E-value=5.6e-19 Score=169.15 Aligned_cols=243 Identities=14% Similarity=0.086 Sum_probs=149.3
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCc--CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGT--ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...|||..|...+.-| ...|.+.+++.+ +... ....| +..-..+|.+.+++++ + . + .++.++||
T Consensus 27 ~~~id~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-----~--~--~~~~~~sg 93 (379)
T TIGR00707 27 KEYLDFVAGIAVNSLG--HAHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS-G-----A--D--RVFFCNSG 93 (379)
T ss_pred CEEEEcCcchhhccCC--CCCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC-C-----C--C--EEEEeCCc
Confidence 4578998874332222 234667666544 3211 11223 2222344555555543 2 1 2 35789999
Q ss_pred hhHHHHHHHHHhhhC-----CCCeEEEcCCCCcchHHHHHhcCceeeE----eeeccCCCCCC--ChHHHHHHHHcCCCC
Q 047180 128 TGACRLFADFQKRFH-----PDSQIYIPVPTWSNHHNIWRDAHVTQRT----FHYYHPGTKGL--DFAALMDDIKNAPNG 196 (337)
Q Consensus 128 ~~al~~~~~~l~~~~-----pgd~Vlv~~P~y~~y~~~~~~~G~~~~~----~~~~~~~~~~~--d~~~l~~~l~~~~~~ 196 (337)
++++.+++.++..+. +||+|++++|+|..|...+...+..... .++..+..+.. |++.+++.+.. +.
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--~~ 171 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD--ET 171 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhh--Ce
Confidence 999998887663221 2799999999999998777666554321 22211111111 78899888763 33
Q ss_pred eEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 197 SFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
+++++ +++|||+|.. ++.+++++|.++|+++++++|+||+|.+|.+. ....+...+ ...++++ +|||.|+
T Consensus 172 ~~v~~-~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~---g~~~~~~~~-~~~~d~~---t~sK~~~- 242 (379)
T TIGR00707 172 AAVIV-EPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRT---GKFFAYEHY-GIEPDII---TLAKGLG- 242 (379)
T ss_pred eEEEE-EccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc---chhhhHHhc-CCCCCEE---EEccccc-
Confidence 45555 5557777764 79999999999999999999999999987532 111111111 2223433 6899999
Q ss_pred cccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 276 YGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+|+|+||+++ ++++++.+ .........+.+.++|.++..+|+
T Consensus 243 ~G~riG~~~~---~~~~~~~~----~~~~~~~~~~~~~~~~~aa~aaL~ 284 (379)
T TIGR00707 243 GGVPIGATLA---KEEVAEAF----TPGDHGSTFGGNPLACAAALAVLE 284 (379)
T ss_pred CCcccEEEEE---cHHHHhhh----cCCCCCCCCCCCHHHHHHHHHHHH
Confidence 9999999886 35444443 332222223467889999987775
No 128
>PLN02822 serine palmitoyltransferase
Probab=99.82 E-value=4.8e-19 Score=174.64 Aligned_cols=236 Identities=11% Similarity=-0.005 Sum_probs=150.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC------cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG------TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~------~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
.+.+||+.|.+.+- ..+|.++++..+ +.. .....|++..+..+|++++++++.. ++. ++.
T Consensus 109 ~~~id~~s~~~lgl----~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~-------~~~--i~~ 175 (481)
T PLN02822 109 KDVVNFASANYLGL----IGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGT-------PDS--ILY 175 (481)
T ss_pred ceEEEeECCCcCCC----CCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCC-------CCE--EEE
Confidence 46799998866432 235556655443 322 1112366677789999999999732 232 466
Q ss_pred eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHH---cC----CCC
Q 047180 124 SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIK---NA----PNG 196 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~---~~----~~~ 196 (337)
+.|++ ++..++..+.. +||.|++...++..+...++..|.+++.++.. |.+.++..++ .. ++.
T Consensus 176 s~G~~-a~~sai~a~~~--~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~ 245 (481)
T PLN02822 176 SYGLS-TIFSVIPAFCK--KGDIIVADEGVHWGIQNGLYLSRSTIVYFKHN-------DMESLRNTLEKLTAENKRKKKL 245 (481)
T ss_pred CCHHH-HHHHHHHHhCC--CCCEEEEeCCccHHHHHHHHHcCCeEEEECCC-------CHHHHHHHHHHHhhhhcccCCC
Confidence 76666 45666666666 89999988777777777888899998888652 2333333332 11 122
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh-hcCCeEEEEecccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL-KDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~ 275 (337)
+.+++..+++||||.+++ +++|+++|++|++++|+||+|....+|. ........+. ......+++.||||.||+
T Consensus 246 ~~~Ivve~i~~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~--~G~G~~e~~~v~~~~~dii~~s~sKalg~ 320 (481)
T PLN02822 246 RRYIVVEAIYQNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGK--SGRGLSEHFGVPIEKIDIITAAMGHALAT 320 (481)
T ss_pred cEEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCC--CCCChHHHcCCCCCCCeEEEecchhhhhh
Confidence 245555789999999999 7889999999999999999998554431 1111111111 112345888999999999
Q ss_pred cccccceeEeeeCCHHHHHHHHHHHHhhhc-cccc-CCChhHHHHHHHHhC
Q 047180 276 YGQRVGCLSVLCEDEKQAVAVKSQLQQLAR-PMYS-NPPVHGALIVSTILG 324 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~~q~~~~~~l~ 324 (337)
+| ||+++ +.++++.++ .... ..++ +.|...|.++..+|+
T Consensus 321 ~G---G~i~g---~~~ii~~~~----~~~~~~~fsa~lPp~~~~Aa~~aL~ 361 (481)
T PLN02822 321 EG---GFCTG---SARVVDHQR----LSSSGYVFSASLPPYLASAAITAID 361 (481)
T ss_pred CC---eEEEc---CHHHHHHHH----hcCCceeeccccCHHHHHHHHHHHH
Confidence 99 99875 455554433 2222 2333 234566777766664
No 129
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.81 E-value=2.3e-18 Score=164.19 Aligned_cols=173 Identities=12% Similarity=-0.043 Sum_probs=127.3
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY 174 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~ 174 (337)
..++++.+++++ +. ++ +++|+|+++++.+++..+.. |||+|+++.|+|......++..|++++.+++.
T Consensus 46 ~~~l~~~la~~~-g~-------~~--i~~~~g~t~al~~~l~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~ 113 (361)
T cd06452 46 IKDFHHDLAEFL-GM-------DE--ARVTPGAREGKFAVMHSLCE--KGDWVVVDGLAHYTSYVAAERAGLNVREVPNT 113 (361)
T ss_pred HHHHHHHHHHHc-CC-------ce--EEEeCCHHHHHHHHHHHhcC--CCCEEEEcCCcchHHHHHHHhcCCEEEEEecC
Confidence 457888888875 32 22 57899999999998877765 89999999998777667788999999999874
Q ss_pred cCCCCCCChHHHHHHHHcCC----CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 175 HPGTKGLDFAALMDDIKNAP----NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 175 ~~~~~~~d~~~l~~~l~~~~----~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
...++.+|++.+++++.+.. .+..++++++||||||... ++++|+++|+++++++|+|++|..-..+ +.
T Consensus 114 ~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~---~~~~i~~~~~~~~~~vivD~a~~~g~~~-~~--- 186 (361)
T cd06452 114 GHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLH---DAKKIAKVCHEYGVPLLLNGAYTVGRMP-VS--- 186 (361)
T ss_pred CCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeec---cHHHHHHHHHHcCCeEEEECCcccCCcC-CC---
Confidence 32246899999999886311 1233444489999999864 5778889999999999999999732110 11
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
.. .. ...+++.|+||.++. |.|+||+++ +++.++++
T Consensus 187 --~~---~~-~~d~~~~s~~K~l~~-~~~~G~l~~---~~~~~~~l 222 (361)
T cd06452 187 --GK---EL-GADFIVGSGHKSMAA-SAPIGVLAT---TEEWADIV 222 (361)
T ss_pred --HH---Hc-CCCEEEecCCccccC-CCCeEEEEE---CHHHHHHH
Confidence 11 11 245788999999984 569999886 45555554
No 130
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.81 E-value=1.6e-18 Score=165.87 Aligned_cols=174 Identities=12% Similarity=0.031 Sum_probs=125.9
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCC-CcchHHHHHhcCceeeEeee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPT-WSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~-y~~y~~~~~~~G~~~~~~~~ 173 (337)
..++++.+|+++ +.. . .++++|+++++..++..+.. +||.|++..|. |+.| ..++..|++++.+|.
T Consensus 53 ~~~~~e~lA~~~-g~~-------~--~~i~~g~~~a~~~~~~~l~~--~gd~Vl~~~~~h~s~~-~~~~~~g~~~~~~~~ 119 (370)
T TIGR02539 53 IHDFLEDLAEFL-GMD-------E--ARVTHGAREGKFAVMHALCK--EGDWVVLDGLAHYTSY-VAAERAGLNVKEVPH 119 (370)
T ss_pred HHHHHHHHHHHh-CCC-------c--eEEECChHHHHHHHHHHhhC--CCCEEEECCcccHHHH-HHHHHcCCEEEEEec
Confidence 356788888876 321 1 34689999999988887765 89999998888 5555 667899999999987
Q ss_pred ccCCCCCCChHHHHHHHHcCC----CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 174 YHPGTKGLDFAALMDDIKNAP----NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 174 ~~~~~~~~d~~~l~~~l~~~~----~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
..+.++.+|++++++.+.+.. .+..++++++|+||||...+ +++|+++|+++++++|+||+|.....+ .+
T Consensus 120 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~---~~ 193 (370)
T TIGR02539 120 TGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP---VS 193 (370)
T ss_pred CCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC---CC
Confidence 433458899999999886311 12344555899999998776 556778899999999999999764211 11
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
.. ..+ .-++++||||+|+ +|.|+||+++ +++.++.+..
T Consensus 194 ---~~---~~~-~di~v~s~sK~~~-~~g~~G~l~~---~~~~i~~l~~ 231 (370)
T TIGR02539 194 ---AK---EIG-ADFIVGSGHKSMA-ASGPCGVLGM---SEEWEDIVLR 231 (370)
T ss_pred ---HH---HcC-CCEEEeeCccccc-CCCCEEEEEE---CHHHHhhhcc
Confidence 11 112 2356699999999 5778999986 4565555543
No 131
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.81 E-value=1.9e-18 Score=166.52 Aligned_cols=244 Identities=14% Similarity=0.080 Sum_probs=152.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...||+..|.....-| ...|.+.+++.+ +... . +....+..++++.+++++....+ .++ +++|+||++
T Consensus 39 ~~~iD~~~g~~~~~lG--~~~p~v~~a~~~~~~~~-~--~~~~~~~~~~~~~la~~l~~~~~----~~~--v~~~~gg~e 107 (396)
T PRK02627 39 KEYLDFLAGIAVNNLG--HCHPKLVEAIQEQAAKL-I--HTSNLYYIEPQEELAEKLVELSG----MDK--VFFCNSGAE 107 (396)
T ss_pred CEEEECCccHHhccCC--CCCHHHHHHHHHHHhhc-c--ccccccCCHHHHHHHHHHHhhcC----CCE--EEECCCcHH
Confidence 4578988875432212 123667666654 3211 1 11122345788888888755432 233 578999999
Q ss_pred HHHHHHHHHhhhC-C----CCeEEEcCCCCcchHHHHHhcCcee-eEeeeccCCCCCC------ChHHHHHHHHcCCCCe
Q 047180 130 ACRLFADFQKRFH-P----DSQIYIPVPTWSNHHNIWRDAHVTQ-RTFHYYHPGTKGL------DFAALMDDIKNAPNGS 197 (337)
Q Consensus 130 al~~~~~~l~~~~-p----gd~Vlv~~P~y~~y~~~~~~~G~~~-~~~~~~~~~~~~~------d~~~l~~~l~~~~~~~ 197 (337)
|+.++++++.... + .++|++.+|+|..+.......+... ...+. .+-..++ |++.+++.+. ++.+
T Consensus 108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~d~~~l~~~i~--~~~~ 184 (396)
T PRK02627 108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGF-EPLVEGFIYVPFNDIEALKAAIT--DKTA 184 (396)
T ss_pred HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccC-CCCCCCceEeCCCCHHHHHHhcC--CCeE
Confidence 9999998665421 1 1789999999998865554433321 11111 0001123 8889988874 2334
Q ss_pred EEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 198 FFLLHACAHNPTG-VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 198 ~ili~~~p~NPTG-~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
++++ .++||||| .+++.+.+++|.++|+++++++|+||+|.+|.... ...+...+ ...+++ .+|||.++ +
T Consensus 185 ~vii-~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g---~~~~~~~~-~~~pdi---~t~sK~~~-~ 255 (396)
T PRK02627 185 AVML-EPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTG---KLFAYQHY-GIEPDI---MTLAKGLG-G 255 (396)
T ss_pred EEEE-ecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccC---ceeeehhc-CCCCCE---EEEcchhh-C
Confidence 5555 56799999 78999999999999999999999999999885321 11111111 112232 47999999 8
Q ss_pred ccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
|+|+||+++ ++++.+. +.........+.+.++|.++..+|+
T Consensus 256 G~rig~~~~---~~~~~~~----~~~~~~~~t~~~~~~~~~aa~~~l~ 296 (396)
T PRK02627 256 GVPIGAVLA---KEKVADV----FTPGDHGSTFGGNPLACAAALAVIE 296 (396)
T ss_pred CcccEEEEE---cHHHHhc----cCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 999999986 3444333 3322222223467889999888886
No 132
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.80 E-value=1.6e-18 Score=167.04 Aligned_cols=204 Identities=13% Similarity=0.120 Sum_probs=140.2
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCC-----CCCCHHHHHHHHHHHhCCCCcccccCceeEEeec-
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLP-----MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSL- 125 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~-----~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~- 125 (337)
.+++|++|.+. ..+++.+.++..+. .....|.+ ..|.+++++++++++....+. +.+.+ +++.
T Consensus 21 ~~~~l~~g~~~-----~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v--~~~~~ 89 (398)
T cd00613 21 SMSFLGSGTYK-----HNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANA--SLQDE 89 (398)
T ss_pred CcccccccccC-----CcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--Cccce--eccCc
Confidence 45899998652 44556666655444 22345766 789999999999998654332 22233 3455
Q ss_pred cchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcC----ceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEE
Q 047180 126 SGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAH----VTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLL 201 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G----~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili 201 (337)
|++++...+..++....+||+|++++|.|+.|...++.+| ++++.+++. . ++.+|++.+++.+.+ +.+++++
T Consensus 90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~--~t~~viv 165 (398)
T cd00613 90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSD-E-GGTVDLEALKEEVSE--EVAALMV 165 (398)
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccC-C-CCCcCHHHHHHhcCC--CeEEEEE
Confidence 4455544444444331139999999999999999998888 888888873 2 457899999988752 3344454
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc----c
Q 047180 202 HACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY----G 277 (337)
Q Consensus 202 ~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G 277 (337)
++|| |||.+. +.+++|+++|+++|+++|+|+++.... ..... . . ...-+++.|++|++ +| |
T Consensus 166 -~~~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~-~~~~~-----~---~-~~~d~~~~s~~K~~-~p~g~Gg 230 (398)
T cd00613 166 -QYPN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLT-GLKPP-----G---E-YGADIVVGNLQKTG-VPHGGGG 230 (398)
T ss_pred -ECCC-CCceec--chHHHHHHHHHhcCCEEEEEecccccc-CCCCh-----H---H-cCCCEEEeeccccC-CCCCCCC
Confidence 6675 999993 557999999999999999999864322 10110 0 1 12457889999999 66 8
Q ss_pred cccceeEe
Q 047180 278 QRVGCLSV 285 (337)
Q Consensus 278 ~RvG~~~~ 285 (337)
+|+||+++
T Consensus 231 p~~g~l~~ 238 (398)
T cd00613 231 PGAGFFAV 238 (398)
T ss_pred CceeEEEE
Confidence 99999986
No 133
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.80 E-value=8.2e-18 Score=159.00 Aligned_cols=172 Identities=18% Similarity=0.146 Sum_probs=118.7
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH 175 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~ 175 (337)
.++++.+++++ +. ++ .+++.+|++++..++..+.. |||.|++++|+|+.+...++..|++++.++.
T Consensus 49 ~~l~~~la~~~-~~------~~---~iv~~sg~~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-- 114 (349)
T cd06454 49 EELEEELAEFH-GK------EA---ALVFSSGYAANDGVLSTLAG--KGDLIISDSLNHASIIDGIRLSGAKKRIFKH-- 114 (349)
T ss_pred HHHHHHHHHHh-CC------CC---EEEeccHHHHHHHHHHHhcC--CCCEEEEehhhhHHHHHHHHHcCCceEEecC--
Confidence 56777777765 21 11 24556667777766665554 8999999999999999889999999887752
Q ss_pred CCCCCCChHHHHHHHHcC--CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 176 PGTKGLDFAALMDDIKNA--PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 176 ~~~~~~d~~~l~~~l~~~--~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
+|.+.+++.+.+. +.+..+++.++||||||...+ +++|+++|+++++++|+|++|.....+ .... ..
T Consensus 115 -----~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~-~~~~--~~ 183 (349)
T cd06454 115 -----NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYG-PHGR--GV 183 (349)
T ss_pred -----CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC---HHHHHHHHHHcCCEEEEEccccccccC-CCCC--Ch
Confidence 4667777777642 134456666899999998865 678889999999999999999632221 1110 11
Q ss_pred HHhh-hcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 254 RIFL-KDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 254 ~~~~-~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
..+. ......+++.|+||.|+++| ||++. +++.++++..
T Consensus 184 ~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~---~~~~~~~~~~ 223 (349)
T cd06454 184 EEFGGLTDDVDIIMGTLGKAFGAVG---GYIAG---SKELIDYLRS 223 (349)
T ss_pred hhhccccccCcEEEeechhhhcccC---CEEEC---CHHHHHHHHH
Confidence 1111 12245788999999999755 98764 5666555544
No 134
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=1.7e-17 Score=159.30 Aligned_cols=191 Identities=14% Similarity=0.086 Sum_probs=134.0
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-h---cCcee
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-D---AHVTQ 168 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~---~G~~~ 168 (337)
.....|++++|++. +. + .++++.||++++.+++..+.. |||+|++++|+|+.....+. . .|.++
T Consensus 52 pt~~~L~~~lA~l~-g~------~---~~i~~~sg~~Ai~~~l~~l~~--~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v 119 (386)
T PRK08045 52 PTRDVVQRALAELE-GG------A---GAVLTNTGMSAIHLVTTVFLK--PGDLLVAPHDCYGGSYRLFDSLAKRGCYRV 119 (386)
T ss_pred ccHHHHHHHHHHHh-CC------C---eEEEECCHHHHHHHHHHHHcC--CCCEEEEcCCCcHHHHHHHHHHHhhCCeEE
Confidence 34568999999975 31 1 257899999999998877666 99999999999996443332 2 23344
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
..+ + ..|++.+++.+.+ +.++++ +++||||||.+++ +++|+++|+++++++|+|++|...... .
T Consensus 120 ~~v---d----~~d~e~l~~~l~~--~tklV~-l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~~---~ 183 (386)
T PRK08045 120 LFV---D----QGDEQALRAALAE--KPKLVL-VESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPALQ---N 183 (386)
T ss_pred EEe---C----CCCHHHHHHhccc--CCeEEE-EECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCccccC---C
Confidence 433 2 2578889888753 334454 4899999999998 567778888999999999999765321 1
Q ss_pred chHHHHHhhhcCCeEEEEeccccccc-ccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMG-LYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++. .+.+ +++.|+||.++ ..|.+.|++++ .++++.+++.. .......+.+.+.+.++...|++
T Consensus 184 ---pl~----~gaD-ivv~S~tK~l~G~~d~~~G~vi~--~~~~~~~~l~~----~~~~~g~~~~p~~~~l~~rgl~t 247 (386)
T PRK08045 184 ---PLA----LGAD-LVLHSCTKYLNGHSDVVAGVVIA--KDPDVVTELAW----WANNIGVTGGAFDSYLLLRGLRT 247 (386)
T ss_pred ---chh----hCCC-EEEeecceeccCCCCceeEEEEe--CcHHHHHHHHH----HHHhcCCCCCHHHHHHHHhhhcc
Confidence 121 1223 78899999995 56678999865 45666555543 22233345778888888888886
No 135
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.78 E-value=1.1e-17 Score=161.57 Aligned_cols=201 Identities=15% Similarity=0.081 Sum_probs=136.3
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-c-CcCCCCCCCC-------CCCHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-A-GTANMEYLPM-------GGSVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~-~~~~~~Y~~~-------~G~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
+.+.|-.+. -.+.++.+.++..+. . ......|.+. ..+.++|+++++++ +.. ++++ ++
T Consensus 16 ~~iyld~a~------~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~-g~~----~~~~--i~ 82 (398)
T TIGR03392 16 GTVYLDSAA------TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL-NAP----DAEN--IV 82 (398)
T ss_pred CeEEeeCcc------ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh-CCC----CCCe--EE
Confidence 356665543 123556677766553 2 1111222222 12456899999987 321 1233 57
Q ss_pred eeccchhHHHHHHHHHh--hhCCCCeEEEcCCCCcc----hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 123 QSLSGTGACRLFADFQK--RFHPDSQIYIPVPTWSN----HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~--~~~pgd~Vlv~~P~y~~----y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
+|.|+++++.+++..+. .+.+||+|++++|.|+. |...++..|++++.+|+. . ++.+|++.+++.+.+ +
T Consensus 83 ~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~-~-~~~~~~~~l~~~i~~--~- 157 (398)
T TIGR03392 83 WTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG-A-DLLPDIRQLPELLTP--R- 157 (398)
T ss_pred EeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC-C-CCCcCHHHHHHHhcc--C-
Confidence 89999999999987763 13489999999999876 455678899999999873 3 467899999988853 3
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
+.++++++||||||.+++ +++|+++|+++|+++|+|++|...... . + +. ..+ --+++.|++|.||++
T Consensus 158 t~lv~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~~-~--~---~~---~~~-~d~~~~s~~K~~gp~ 224 (398)
T TIGR03392 158 TRILALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHGP-P--D---VQ---ALD-IDFYAFSGHKLYGPT 224 (398)
T ss_pred ceEEEEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-C--C---hh---hcC-CCEEEEecccccCCC
Confidence 344455899999999987 567888999999999999999643211 1 1 11 111 235567788999977
Q ss_pred ccccceeEe
Q 047180 277 GQRVGCLSV 285 (337)
Q Consensus 277 G~RvG~~~~ 285 (337)
| +||+++
T Consensus 225 G--~G~l~~ 231 (398)
T TIGR03392 225 G--IGVLYG 231 (398)
T ss_pred c--eEEEEE
Confidence 6 899986
No 136
>PRK06460 hypothetical protein; Provisional
Probab=99.78 E-value=1e-17 Score=160.59 Aligned_cols=167 Identities=12% Similarity=0.030 Sum_probs=114.5
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCC----cchHHHHHhcCcee
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTW----SNHHNIWRDAHVTQ 168 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y----~~y~~~~~~~G~~~ 168 (337)
....+|++++|++.... . .+++.+|++++..++..+.. |||+|++++|.| ..|...++..|+++
T Consensus 45 p~~~~L~~~lA~l~g~~-------~---~v~~~sG~~ai~~~l~al~~--~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v 112 (376)
T PRK06460 45 PTVLELTKKIVELENAE-------M---GVAFSSGMGAISTTALALLK--PGNSVLVHRDMFGRSYRFFTDYLKNWGVNV 112 (376)
T ss_pred ccHHHHHHHHHHHhCCC-------c---EEEeCCHHHHHHHHHHHHhC--CCCEEEEecCCcCcHHHHHHHHHHhhCcEE
Confidence 46788999999986321 1 23456667899888776655 999999998654 45567778899998
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
+.++.. +.+.+++.+. ++ ..++++++||||||.+++.+ +|+++|+++|++||+||+|..... .
T Consensus 113 ~~~~~~-------~~~~l~~~~~--~~-tklV~l~sp~NPtG~v~d~~---~I~~la~~~g~~vivDea~~~~~~--~-- 175 (376)
T PRK06460 113 DASNPG-------SDNIIEKAKS--KR-YDVVFVENITNPLLRVVDIT---ELSKVCKENGSILIVDATFSTPIN--Q-- 175 (376)
T ss_pred EEECCC-------CHHHHHHhcC--CC-ceEEEEECCCCCCCcccCHH---HHHHHHHHcCCEEEEECCcCcccc--C--
Confidence 877641 1123333222 23 34444599999999999976 577888999999999999975421 1
Q ss_pred chHHHHHhhhcCCeEEEEeccccccc-ccccccceeEeeeCCHHHHHHHHH
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMG-LYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
..+ .. ...+++.|+||.|+ ..|.|+||++. ++++++++..
T Consensus 176 -----~~l-~~-~~divv~S~sK~l~G~~~~~~G~~~~---~~~l~~~l~~ 216 (376)
T PRK06460 176 -----KPL-EL-GADIVVHSASKFLAGHNDVIAGLAAG---YGKLLNVIDQ 216 (376)
T ss_pred -----Chh-hc-CCCEEEeecceeccCCCCceEEEEec---CHHHHHHHHH
Confidence 111 11 24588999999986 22367999874 5666666553
No 137
>PLN02483 serine palmitoyltransferase
Probab=99.78 E-value=2.6e-17 Score=162.67 Aligned_cols=217 Identities=13% Similarity=0.058 Sum_probs=142.5
Q ss_pred CCeeEeeeeeeecCC-CCcccchHHHHHHHHhc---CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 51 PDKVNVGVGAYRDDN-GKPVVLECVREAERRIA---GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~-~~~~~~~~v~~a~~~~~---~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
...+||+.=.|.+-. .++.+.+++.+|+++.. ......|++..+..+|++++|+|+. . ++. ++.+.|
T Consensus 100 ~~~~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-~------~~a--i~~~~G 170 (489)
T PLN02483 100 RRCLNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-K------PAA--IVFGMG 170 (489)
T ss_pred ceEEEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-C------CcE--EEECCH
Confidence 456888765554332 23445567777776652 1333458877889999999999983 2 222 344444
Q ss_pred chhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC----------CCC
Q 047180 127 GTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA----------PNG 196 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~----------~~~ 196 (337)
..+...++..+.. |||.|++++|+|+.+...++..|++++.++.. |.+.+++.+++. +.+
T Consensus 171 -~~an~~~i~al~~--~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 171 -YATNSTIIPALIG--KGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred -HHHHHHHHHHhCC--CCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCc
Confidence 4444444455555 99999999999999999999999999988741 345555544321 112
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh-hcCCeEEEEecccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL-KDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~ 275 (337)
++++++....|++|.+. .+++|+++|++++++||+||+|.....+. ........+. ...+..|+++||||+||+
T Consensus 241 k~livve~v~s~~G~~~---~l~~I~~la~~~~~~livDEa~s~g~~G~--~G~g~~~~~~v~~~~~dI~~~SfSKs~g~ 315 (489)
T PLN02483 241 KIIVIVEGIYSMEGELC---KLPEIVAVCKKYKAYVYLDEAHSIGAVGK--TGRGVCELLGVDPADVDIMMGTFTKSFGS 315 (489)
T ss_pred eEEEEECCCCCCCCccc---CHHHHHHHHHHcCCEEEEECcCccCccCC--CCCchHHhcCCCcccCcEEEEecchhccc
Confidence 45666555669999886 57788899999999999999997432221 1111111111 112457889999999998
Q ss_pred cccccceeEeeeCCHHHHHHHH
Q 047180 276 YGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
+| ||+++ ++++++.+.
T Consensus 316 ~G---G~i~~---~~~li~~l~ 331 (489)
T PLN02483 316 CG---GYIAG---SKELIQYLK 331 (489)
T ss_pred Cc---eEEEc---CHHHHHHHH
Confidence 87 99874 566555554
No 138
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.78 E-value=2e-17 Score=158.73 Aligned_cols=192 Identities=16% Similarity=0.098 Sum_probs=129.4
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh-cCceeeEee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD-AHVTQRTFH 172 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~-~G~~~~~~~ 172 (337)
-..+|+++++++. +. ++ +++++||++|+.+++..+.. |||+|++++|+|+.....+.. .+...+.+.
T Consensus 52 ~~~~le~~lA~l~-g~-------~~--v~~~~gg~~Ai~~~l~all~--~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~ 119 (382)
T TIGR02080 52 TRDLLQQALAELE-GG-------AG--AVVTNTGMSAIHLVTTALLG--PDDLLVAPHDCYGGTYRLLNALAKKGCFRVL 119 (382)
T ss_pred hHHHHHHHHHHHh-CC-------Cc--EEEEcCHHHHHHHHHHHHcC--CCCEEEEcCCCcHHHHHHHHHHHhhcCeEEE
Confidence 3567889999975 21 22 57899999999999887765 999999999999965544332 322223333
Q ss_pred eccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHH
Q 047180 173 YYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKA 252 (337)
Q Consensus 173 ~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~ 252 (337)
+.+ ..|++.+++++.. +. .++++++||||||.+++ +++|+++|++++++||+|++|...... . +
T Consensus 120 ~~d----~~d~~~l~~ai~~--~t-klV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---~---p 183 (382)
T TIGR02080 120 FVD----QGDEQALRAALAQ--KP-KLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ---N---P 183 (382)
T ss_pred EEC----CCCHHHHHHhcCc--Cc-eEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC---C---c
Confidence 322 2478889888753 33 44445899999999998 457888899999999999999765321 1 1
Q ss_pred HHHhhhcCCeEEEEeccccccc-ccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 253 IRIFLKDGHLLGLAQSYAKNMG-LYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 253 ~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+. + +. -++++|+||.++ .+|+|.|++++ .+++.++++... ....-.+.+.+.+.++..-|+
T Consensus 184 l~-~---ga-Divv~S~sK~l~G~~~~~~G~i~~--~~~~~~~~l~~~----~~~~g~~~sp~~a~l~lr~l~ 245 (382)
T TIGR02080 184 LA-L---GA-DLVLHSCTKYLNGHSDVIAGAVIA--KDPQVAEELAWW----ANNLGVTGGAFDSYLTLRGLR 245 (382)
T ss_pred hh-h---CC-CEEEeecceeccCCCCceeEEEEe--CCHHHHHHHHHH----HHccCCCCCHHHHHHHHcccc
Confidence 11 1 22 377899999985 67889999875 566666655432 122223455556655544444
No 139
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.77 E-value=1.6e-17 Score=160.42 Aligned_cols=228 Identities=15% Similarity=0.088 Sum_probs=145.4
Q ss_pred chhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC------cCCCCCCCCCCCHHHHHHHHHHHhCC
Q 047180 37 PILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG------TANMEYLPMGGSVKMVEETLKLAYGD 109 (337)
Q Consensus 37 ~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~------~~~~~Y~~~~G~~~lr~aia~~~~~~ 109 (337)
+++.+...-+.. +.+.++|.-|. .++++.|++++.. +.. .....|....+.+.+++++.+++...
T Consensus 6 ~~~~~~~~~~~~-~~~~~~~~~~~-------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~ 77 (402)
T cd00378 6 EIAEIIKKENER-QRETLELIASE-------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKL 77 (402)
T ss_pred HHHHHHHHHHHH-HHhCeeeeccC-------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHH
Confidence 455554332111 23578887663 3356778887654 211 11233555566677888765554222
Q ss_pred CCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH-----HHhcCceeeEeeeccC-CCCCCCh
Q 047180 110 NSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI-----WRDAHVTQRTFHYYHP-GTKGLDF 183 (337)
Q Consensus 110 ~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~-----~~~~G~~~~~~~~~~~-~~~~~d~ 183 (337)
.+. +.. . +.+++|++++.+++..+.. |||+|++++|+|+.+... ++..|.+++.+++... +++.+|+
T Consensus 78 ~g~--~~~--~-v~~~sgt~a~~~~l~~l~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~ 150 (402)
T cd00378 78 FGA--EYA--N-VQPHSGSQANLAVYFALLE--PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDY 150 (402)
T ss_pred hCC--Cce--e-eecCCcHHHHHHHHHHhcC--CCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCH
Confidence 111 111 2 3444678999988887765 999999999999987544 6678887777766322 2688999
Q ss_pred HHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccC-CCCCCCCCccchHHHHHhhhcCCe
Q 047180 184 AALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAY-QGFASGDPERDAKAIRIFLKDGHL 262 (337)
Q Consensus 184 ~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~~ 262 (337)
+++++.+... +.++++ .++|+||+.. ++++|+++|+++|+++|+|++| .++.+... . . ..+. ..+
T Consensus 151 ~~l~~~i~~~-~~~~v~-~~~~~~~~~~-----~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~-~-~---~~~~--~~d 216 (402)
T cd00378 151 DALEKMALEF-KPKLIV-AGASAYPRPI-----DFKRFREIADEVGAYLLVDMAHVAGLVAGGV-F-P---NPLP--GAD 216 (402)
T ss_pred HHHHHHHHhC-CCCEEE-ecCcccCCCc-----CHHHHHHHHHhcCCEEEEEccchhhhhhccc-C-C---Cccc--CCc
Confidence 9999988632 234444 4778887532 4788999999999999999994 55543210 0 0 0111 223
Q ss_pred EEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 263 LGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 263 ~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+++.|+||+| +|+|.||+++ .++++++++..
T Consensus 217 -v~~~s~sK~l--~G~~gg~i~~--~~~~~~~~l~~ 247 (402)
T cd00378 217 -VVTTTTHKTL--RGPRGGLILT--RKGELAKKINS 247 (402)
T ss_pred -EEEeccccCC--CCCCceEEEe--ccHHHHHHHHH
Confidence 6789999987 7999999986 44466665543
No 140
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=2.7e-17 Score=158.58 Aligned_cols=190 Identities=13% Similarity=0.046 Sum_probs=131.5
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~~ 169 (337)
-..+|++.++++. +.. . .+++.+|+.|+.+++..+.. |||+|+++.|+|+.... .++..|++++
T Consensus 65 ~~~~le~~lA~l~-g~~-------~--~i~~ssG~~Ai~~~l~all~--~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~ 132 (398)
T PRK08249 65 TVQAFEEKVRILE-GAE-------A--ATAFSTGMAAISNTLYTFLK--PGDRVVSIKDTYGGTNKIFTEFLPRMGVDVT 132 (398)
T ss_pred HHHHHHHHHHHHh-CCC-------e--EEEeCChHHHHHHHHHHhcC--CCCEEEEcCCchHHHHHHHHHHHhhCCeEEE
Confidence 3467899999976 321 1 36778889999988876655 89999999999997543 3456787776
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++ ..|++.++++++. +.++ +++++|+||||.+++ +++|+++|+++++++|+|++|...... .
T Consensus 133 ~vd-------~~d~e~l~~~i~~--~tkl-V~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~---~- 195 (398)
T PRK08249 133 LCE-------TGDHEQIEAEIAK--GCDL-LYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ---N- 195 (398)
T ss_pred EcC-------CCCHHHHHHhcCC--CCeE-EEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC---C-
Confidence 553 2578999888853 3344 444899999999998 566888899999999999999865421 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+.. .+.. +++.|+||.++-+|.++|.+++ .++++++++.. +......+.+.+.+.++..-|+.
T Consensus 196 --~l~----~~~D-ivv~S~sK~l~g~~~~~gG~vv--~~~~l~~~l~~----~~~~~g~~~s~~~a~l~l~~l~t 258 (398)
T PRK08249 196 --PLA----LGAD-LVIHSATKFLSGHADALGGVVC--GSKELMEQVYH----YREINGATMDPMSAYLILRGMKT 258 (398)
T ss_pred --chh----hCCC-EEeccCceecCCCCCceEEEEE--CCHHHHHHHHH----HHHhcCCCCCHHHHHHHHhCcch
Confidence 111 1222 6779999999988888855544 36666665543 22222334566666665555553
No 141
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.77 E-value=3.1e-17 Score=158.29 Aligned_cols=190 Identities=13% Similarity=0.096 Sum_probs=127.6
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~ 169 (337)
-..+|++.+|++. +.. + .+++.+|+.++..++..+.. |||+|++++|.|+.+...+ +..|.+++
T Consensus 66 ~~~~Le~~lA~l~-G~~-----~----~~~~~sG~~Ai~~~l~~~l~--~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~ 133 (398)
T PRK07504 66 TVDMFEKRMCALE-GAE-----D----ARATASGMAAVTAAILCQVK--AGDHVVAARALFGSCRYVVETLLPRYGIEST 133 (398)
T ss_pred hHHHHHHHHHHHh-CCC-----e----eeEecCHHHHHHHHHHHHhC--CCCEEEEcCCchhHHHHHHHHHHhhcCeEEE
Confidence 3578999999975 321 1 23567888888766655444 9999999999999865544 45687777
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++ .+|++.+++++.. +.++ |++++|+||||.+++ +++|.++|+++++++|+|++|...... .
T Consensus 134 ~vd-------~~d~e~l~~ai~~--~tkl-V~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~---~- 196 (398)
T PRK07504 134 LVD-------GLDLDNWEKAVRP--NTKV-FFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ---K- 196 (398)
T ss_pred EEC-------CCCHHHHHHhcCc--CceE-EEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC---C-
Confidence 663 3688999888752 3344 445899999999997 677888899999999999999754321 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHH-HHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAV-AVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+. ..+ .-+++.|+||.|+.+|+|+|.+++ .+++.+. +++..+. ..-.+++.+.+.++..-|+.
T Consensus 197 --~~----~~g-aDivv~S~sK~l~g~g~~~GG~vv--~~~~~i~~~~~~~~~----~~g~~~s~~~A~~~l~~L~t 260 (398)
T PRK07504 197 --PL----ELG-AHIVVYSATKHIDGQGRCLGGVVL--SDKAWIEEHLQDYFR----HTGPSLSPFNAWTLLKGLET 260 (398)
T ss_pred --ch----hhC-CCEEEeeccccccCCccceEEEEE--eCcHHHHHHHHHHHH----HhCCCCCHHHHHHHHhccch
Confidence 11 112 346789999999999999986654 2344333 2332222 12234455555555555554
No 142
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.77 E-value=4.2e-17 Score=156.98 Aligned_cols=166 Identities=15% Similarity=0.132 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~~~ 170 (337)
..+|++.+++++ +. +. ++.|.||++|+.+++..+.. |||+|+++++.|+.... .++..|++++.
T Consensus 63 ~~~le~~la~l~-g~-------~~--~v~~ssG~~Ai~~al~al~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~ 130 (390)
T PRK08133 63 VTMFQERLAALE-GA-------EA--CVATASGMAAILAVVMALLQ--AGDHVVSSRSLFGSTVSLFEKIFARFGIETTF 130 (390)
T ss_pred HHHHHHHHHHHh-CC-------Cc--EEEECCHHHHHHHHHHHHhC--CCCEEEEccCcchhHHHHHHHHHHHcCcEEEE
Confidence 457888888875 32 12 46789999999988776655 89999999999876443 45678999888
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++.. |++.+++.+.. +.++++ +++|+||||.+.+ +++|+++|+++|++||+|++|...... .
T Consensus 131 vd~~-------d~~~l~~~i~~--~tklV~-ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~---~-- 192 (390)
T PRK08133 131 VDLT-------DLDAWRAAVRP--NTKLFF-LETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ---Q-- 192 (390)
T ss_pred ECCC-------CHHHHHHhcCc--CCeEEE-EECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC---C--
Confidence 7651 67888887752 334444 4899999999986 678889999999999999998654321 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
++. .+. -+++.|+||.++.+|+|+|.+++ .+++.++++..
T Consensus 193 -pl~----~g~-Divv~S~sK~~~g~g~~~GG~vv--~~~~~~~~~~~ 232 (390)
T PRK08133 193 -PLK----LGA-DVVIHSATKYLDGQGRVLGGAVV--GSKELMEEVFG 232 (390)
T ss_pred -chh----hCC-cEEEeecceeecCCcceEeEEEE--cCHHHHHHHHH
Confidence 111 122 36789999999999999966554 35555555543
No 143
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.77 E-value=4.1e-17 Score=157.63 Aligned_cols=189 Identities=15% Similarity=0.130 Sum_probs=131.5
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc----hHHHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSN----HHNIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~----y~~~~~~~G~~~~~ 170 (337)
..+|++.++++. +- ++ .+++.+|++++.+++..+.. |||+|+++.|+|+. |...++..|.+++.
T Consensus 62 ~~~Le~~lA~l~-g~------~~---~v~~~sG~~Ai~~~l~all~--pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~ 129 (405)
T PRK08776 62 RDLLGEALAELE-GG------AG---GVITATGMGAINLVLNALLQ--PGDTLVVPHDAYGGSWRLFNALAKKGHFALIT 129 (405)
T ss_pred HHHHHHHHHHHh-CC------Cc---eEEEcCHHHHHHHHHHHHhC--CCCEEEEccCCchHHHHHHHHHHHhcCcEEEE
Confidence 356888888864 21 12 25677778999988877765 99999999999997 45555667877777
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++. .|++.+++.+.. +.+++ ++++||||||.+. ++++|+++|+++|++||+|++|..-. ..
T Consensus 130 v~~-------~d~~~l~~~i~~--~tklV-~l~~P~NPtG~v~---dl~~I~~la~~~gi~vIvD~a~a~~~---~~--- 190 (405)
T PRK08776 130 ADL-------TDPRSLADALAQ--SPKLV-LIETPSNPLLRIT---DLRFVIEAAHKVGALTVVDNTFLSPA---LQ--- 190 (405)
T ss_pred ECC-------CCHHHHHHhcCc--CCeEE-EEECCCCCCCccC---CHHHHHHHHHHcCCEEEEECCCcccc---cC---
Confidence 654 378888887752 33444 5589999999985 47889999999999999999996421 11
Q ss_pred HHHHHhhhcCCeEEEEeccccccccc-ccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLY-GQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
.++. .+.. +++.|.+|.++-+ |+..|++++ .++++.+++..... ..-.+++.+.+.++...++.
T Consensus 191 ~pl~----~gaD-ivv~S~tK~l~g~~~~~~G~vv~--~~~~l~~~l~~~~~----~~g~~~s~~~a~l~~~gl~t 255 (405)
T PRK08776 191 KPLE----FGAD-LVLHSTTKYINGHSDVVGGAVVA--RDAELHQQLVWWAN----ALGLTGSPFDAFLTLRGLRT 255 (405)
T ss_pred Cccc----ccCC-EEEecCceeecCCCCceEEEEEe--CCHHHHHHHHHHHH----hcCCCCCHHHHHHHHhhhCc
Confidence 1111 1222 7888999999765 477888765 56766666543211 12224677777777766665
No 144
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.77 E-value=3.2e-17 Score=159.63 Aligned_cols=248 Identities=15% Similarity=0.058 Sum_probs=156.1
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|.....-| ..+|.|.+|+++ +... .+.+.+..+..+|++++++++.+. ++ ++.++||++
T Consensus 48 ~~ylD~~~g~~~~~lG--h~~p~v~~ai~~q~~~~-~~~~~~~~~~~~lae~l~~~~~~~-------~~--v~~~~sGse 115 (423)
T TIGR00713 48 NEYIDYVLSWGPLILG--HAHPRVVEAVKEALERG-TSYGAPTEAEILLAKEIISRVPSV-------EM--VRFVNSGTE 115 (423)
T ss_pred CEEEEccccccccccC--CCCHHHHHHHHHHHHhC-CcCCCCCHHHHHHHHHHHHhCCcc-------cE--EEEeCCHHH
Confidence 4578887774321112 245667666654 4332 222235668899999999986321 23 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh---cCceeeEeeeccC--C-----CC---CCChHHHHHHHHcCC-C
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD---AHVTQRTFHYYHP--G-----TK---GLDFAALMDDIKNAP-N 195 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~---~G~~~~~~~~~~~--~-----~~---~~d~~~l~~~l~~~~-~ 195 (337)
|+..++++...+...++|+...|+|.++...+.. .|.....++.... . .. ..|++.+++.+...+ +
T Consensus 116 A~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~ 195 (423)
T TIGR00713 116 ATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEE 195 (423)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCc
Confidence 9999887655444569999999999998643332 1111111111100 0 00 027889988886432 2
Q ss_pred CeEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 196 GSFFLLHACAHNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
...+++.+.|+| +|.+++ ++.+++|.++|++||+++|+||+|.+|..+. . .....+ ...+++ .+|||.++
T Consensus 196 ~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~---~-~~~~~~-~~~pDi---~t~sK~l~ 266 (423)
T TIGR00713 196 IAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVAL---G-GAQEYF-GVEPDL---TTLGKIIG 266 (423)
T ss_pred EEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCc---c-hhHHHh-CCCcch---hhhhhhhc
Confidence 356777789999 798888 6999999999999999999999999886431 1 111111 112332 37999999
Q ss_pred ccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+|+|+||+++ ++++.+.+... .........+.+.++|.++..+|+
T Consensus 267 -~G~pig~v~~---~~~i~~~~~~~-~~~~~~~T~~~~~~~~aaa~a~l~ 311 (423)
T TIGR00713 267 -GGLPVGAFGG---RREIMERLAPE-GPVYQAGTLSGNPLAMAAGLATLK 311 (423)
T ss_pred -CCCceeeeeE---HHHHHHhhCcC-CCeeeccCCCCCHHHHHHHHHHHH
Confidence 8999999986 34444444210 011111222467788888777765
No 145
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.76 E-value=1.7e-17 Score=153.94 Aligned_cols=185 Identities=11% Similarity=-0.014 Sum_probs=129.7
Q ss_pred CC-CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEe
Q 047180 93 GG-SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTF 171 (337)
Q Consensus 93 ~G-~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~ 171 (337)
.| +.++++.+|+++ +.. +. ++.|+|+++++..++..+.. |||+|+++.|+|..+...+...|++++.+
T Consensus 58 ~g~i~~~~~~~A~~~-ga~-------~~-~~~~~Gst~a~~~~l~al~~--~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v 126 (294)
T cd00615 58 TGPIKEAQELAARAF-GAK-------HT-FFLVNGTSSSNKAVILAVCG--PGDKILIDRNCHKSVINGLVLSGAVPVYL 126 (294)
T ss_pred ChHHHHHHHHHHHHh-CCC-------CE-EEEcCcHHHHHHHHHHHcCC--CCCEEEEeCCchHHHHHHHHHCCCEEEEe
Confidence 34 667888888876 321 22 45689999999888777665 99999999999999999999999998888
Q ss_pred eeccCCC----CCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCC
Q 047180 172 HYYHPGT----KGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDP 246 (337)
Q Consensus 172 ~~~~~~~----~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~ 246 (337)
+.....+ ..+|++.+++.+.+.++.+++++ ++| ||||.+++ +++|+++|++++++||+||+|.... +.
T Consensus 127 ~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l-~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~-- 199 (294)
T cd00615 127 KPERNPYYGIAGGIPPETFKKALIEHPDAKAAVI-TNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFH-- 199 (294)
T ss_pred cCccCcccCcCCCCCHHHHHHHHHhCCCceEEEE-ECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccC--
Confidence 6532222 36899999999875443445555 678 79999996 6789999999999999999997532 21
Q ss_pred ccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHH
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQ 301 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~ 301 (337)
.. .+.. ... ....+++.|++|++ +|+|.|+++.........+++...+.
T Consensus 200 -~~-~~~~-~~~-~~~div~~S~hK~l--~g~~~~~~l~~~~~~~~~~~~~~~~~ 248 (294)
T cd00615 200 -PI-LPSS-AAM-AGADIVVQSTHKTL--PALTQGSMIHVKGDLVNPDRVNEALN 248 (294)
T ss_pred -cc-cCcc-hhh-cCCcEEEEchhccc--chHhHHHHHHhCCCcCCHHHHHHHHH
Confidence 10 0111 111 23578889999985 68998776543222122344544433
No 146
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.75 E-value=5.6e-17 Score=156.61 Aligned_cols=243 Identities=14% Similarity=0.079 Sum_probs=145.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC-c-CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG-T-ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~-~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...+|+..|.....-|. ..|.+.+++.+ +.. . ....|....+ .+|.+.+++++ +.. +.++ ++.++||
T Consensus 43 ~~~lD~~s~~~~~~lG~--~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~-~~~----~~~~--v~~~~sg 112 (398)
T PRK03244 43 KEYLDLLGGIAVNALGH--AHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL-GAP----EGGR--VFFCNSG 112 (398)
T ss_pred CEEEECCcCHhhccCCC--CCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC-CCC----CCCE--EEEeCch
Confidence 45788887743221221 24667666554 322 1 1234644333 34555555543 211 1233 5789999
Q ss_pred hhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHH-hcCceeeEeeec--cCCCC---CCChHHHHHHHHcCCCCeEEE
Q 047180 128 TGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWR-DAHVTQRTFHYY--HPGTK---GLDFAALMDDIKNAPNGSFFL 200 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~-~~G~~~~~~~~~--~~~~~---~~d~~~l~~~l~~~~~~~~il 200 (337)
++|+..+++++.. +| +.|+..+++|+.+..... ..|......++. ..+.. -.|++.+++.+. +...+++
T Consensus 113 sea~~~al~~~~~--~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~--~~~~avi 188 (398)
T PRK03244 113 AEANEAAFKLARL--TGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVD--DDTAAVF 188 (398)
T ss_pred HHHHHHHHHHHHH--HCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhc--CCeEEEE
Confidence 9999999887665 45 678888899998864443 233221111110 00000 127888888774 2334445
Q ss_pred EeCCCCCCCCCCCCHHH-HHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccc
Q 047180 201 LHACAHNPTGVDPSEEQ-WKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQR 279 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~-~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 279 (337)
+ ++++||||.+++.++ +++|.++|+++|+++|+||+|.+|... ....... .....+++ .+|||.++ +|+|
T Consensus 189 i-ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~---g~~~~~~-~~~~~pDi---~t~sK~l~-~G~~ 259 (398)
T PRK03244 189 L-EPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRT---GAWFAHQ-HDGVTPDV---VTLAKGLG-GGLP 259 (398)
T ss_pred E-ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccc---chHHhhh-hhCCCCCE---EEEchhhh-CCcc
Confidence 4 778999999997655 999999999999999999999887421 1111111 11122343 37899999 8999
Q ss_pred cceeEeeeCCHHHHHHHHHHHHhh-hcccccCCChhHHHHHHHHhC
Q 047180 280 VGCLSVLCEDEKQAVAVKSQLQQL-ARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 280 vG~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+||+++ .+++.+.+ ... ...++ +.+.++|.++..+|+
T Consensus 260 ig~~~~---~~~~~~~~----~~~~~~~t~-~~~~~~~aaa~a~l~ 297 (398)
T PRK03244 260 IGACLA---FGPAADLL----TPGLHGSTF-GGNPVACAAALAVLD 297 (398)
T ss_pred cEEEEE---cHHHHhhc----cCCCCcCCC-CCCHHHHHHHHHHHH
Confidence 999986 34444433 221 22344 456788988888865
No 147
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=1.4e-16 Score=153.38 Aligned_cols=168 Identities=17% Similarity=0.111 Sum_probs=118.5
Q ss_pred CCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH----hcCc
Q 047180 91 PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR----DAHV 166 (337)
Q Consensus 91 ~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~----~~G~ 166 (337)
+.....+|++++|++....+ .+.+.+|++|+.+++..+.. |||+|++++|+|+.....+. ..|.
T Consensus 59 ~~p~~~~Le~~lA~~~g~~~----------~i~~~sG~~Ai~~~l~all~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi 126 (388)
T PRK07811 59 GNPTRTALEEQLAALEGGAY----------GRAFSSGMAATDCLLRAVLR--PGDHIVIPNDAYGGTFRLIDKVFTRWGV 126 (388)
T ss_pred CCccHHHHHHHHHHHhCCCc----------eEEeCCHHHHHHHHHHHHhC--CCCEEEEcCCCchHHHHHHHHhCcCCCe
Confidence 34567899999999863322 24556778999999877765 99999999999995433332 2466
Q ss_pred eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCC
Q 047180 167 TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDP 246 (337)
Q Consensus 167 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~ 246 (337)
+++.++. .|++.+++.+.. +.++ |++++|+||||.+. ++++|+++|++++++||+|++|......
T Consensus 127 ~~~~~d~-------~d~e~l~~~i~~--~tkl-V~ie~p~NPtg~~~---dl~~I~~la~~~gi~lIvD~a~a~~~~~-- 191 (388)
T PRK07811 127 EYTPVDL-------SDLDAVRAAITP--RTKL-IWVETPTNPLLSIT---DIAALAELAHDAGAKVVVDNTFASPYLQ-- 191 (388)
T ss_pred EEEEeCC-------CCHHHHHHhcCc--CCeE-EEEECCCCCcceec---CHHHHHHHHHHcCCEEEEECCCCccccC--
Confidence 6665532 478999888753 3344 44589999999874 5778889999999999999999765321
Q ss_pred ccchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
. ++. .+. -+++.|+||.++.+| .+.||+++ +++++.+++
T Consensus 192 -~---p~~----~ga-Divv~S~sK~l~g~~~~~gG~vv~--~~~~l~~~~ 231 (388)
T PRK07811 192 -Q---PLA----LGA-DVVVHSTTKYIGGHSDVVGGALVT--NDEELDEAF 231 (388)
T ss_pred -C---chh----hCC-cEEEecCceeecCCCCcEEEEEEE--CCHHHHHHH
Confidence 1 111 122 278899999998765 46798875 455554444
No 148
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.75 E-value=9.4e-17 Score=155.68 Aligned_cols=236 Identities=14% Similarity=0.058 Sum_probs=139.2
Q ss_pred eeEeeeeeeecCCCCcccchHHHHHHHH-hcCcC-----C-CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeec
Q 047180 53 KVNVGVGAYRDDNGKPVVLECVREAERR-IAGTA-----N-MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSL 125 (337)
Q Consensus 53 ~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~-----~-~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 125 (337)
.++++.-.|. + ...+|.+++|..+ +.... . .-|+...-..+|++.+++++ +. ++. ++.+
T Consensus 48 ~~~~~sn~yl---~-l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~-g~------~~~--i~~~- 113 (410)
T PRK13392 48 VTIWCSNDYL---G-MGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH-GK------ESA--LLFT- 113 (410)
T ss_pred EEEEECCCcc---C-CCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh-CC------CCE--EEEC-
Confidence 5666653332 2 2245667666544 32111 1 11222223568999999986 32 122 3444
Q ss_pred cchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC-CCeEEEEeCC
Q 047180 126 SGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP-NGSFFLLHAC 204 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~ili~~~ 204 (337)
.|+++...++..+....+||.|+++.+.+..+...++..|+++..++. -|++.+++.+.... .++.++++++
T Consensus 114 sG~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~t~~v~i~~ 186 (410)
T PRK13392 114 SGYVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH-------NDLADLEEQLASVDPDRPKLIAFES 186 (410)
T ss_pred cHHHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC-------CCHHHHHHHHHhccCCCCEEEEEeC
Confidence 445666555554443237898888877777777778888988766532 14455555554321 2344555699
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeE-EEEeccccccccccccccee
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLL-GLAQSYAKNMGLYGQRVGCL 283 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~S~SK~~~~~G~RvG~~ 283 (337)
||||||.+++ +++|.++|+++++++|+||+|..-.++. ... .+.......+++ ++++||||.||++| ||+
T Consensus 187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~--~g~-g~~~~~~~~~~~div~~tlsK~~g~~G---G~~ 257 (410)
T PRK13392 187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGA--RGG-GIAERDGLMDRIDMIQGTLAKAFGCLG---GYI 257 (410)
T ss_pred CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCC--CCC-chhhhccCCCCCcEEEEEChHhhhccc---chh
Confidence 9999999998 7778888999999999999998322221 111 111111111233 77899999999998 998
Q ss_pred EeeeCCHHHHHHHHHHHHhhhcc-cc-cCCChhHHHHHHHHhCC
Q 047180 284 SVLCEDEKQAVAVKSQLQQLARP-MY-SNPPVHGALIVSTILGD 325 (337)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~~~~q~~~~~~l~~ 325 (337)
++ +++.++.++. .... .+ ...+...|.++..+|+.
T Consensus 258 ~~---~~~~~~~l~~----~~~~~~~s~~~~~~~~~a~~aaL~~ 294 (410)
T PRK13392 258 AA---SADLIDFVRS----FAPGFIFTTALPPAVAAGATAAIRH 294 (410)
T ss_pred hc---CHHHHHHHHH----hCcchhccCcCCHHHHHHHHHHHHH
Confidence 64 5555554432 2221 11 22344667777777764
No 149
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.75 E-value=1e-16 Score=153.05 Aligned_cols=192 Identities=17% Similarity=0.097 Sum_probs=133.1
Q ss_pred CCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCc
Q 047180 91 PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHV 166 (337)
Q Consensus 91 ~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~ 166 (337)
+.....+|+++++++. +. + .+++.+|+.++.+++..+.. |||+|++++|+|+.+...+ +..|+
T Consensus 49 ~~p~~~~Le~~lA~l~-~~-------~---~v~~~sG~~Ai~~~l~all~--~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~ 115 (366)
T PRK07582 49 SNPTWRALEAALGELE-GA-------E---ALVFPSGMAAITAVLRALLR--PGDTVVVPADGYYQVRALAREYLAPLGV 115 (366)
T ss_pred CCccHHHHHHHHHHHc-CC-------C---EEEECCHHHHHHHHHHHhcC--CCCEEEEeCCCcHhHHHHHHHHHhcCeE
Confidence 5567889999999986 21 2 35677778898888766644 9999999999999987654 44788
Q ss_pred eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCC
Q 047180 167 TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDP 246 (337)
Q Consensus 167 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~ 246 (337)
+++.++..+. .+ . .. ++.++++ +++|+||||.+.+ +++|+++|+++++++|+|++|.... + .
T Consensus 116 ~v~~v~~~~~------~~---~-~~--~~t~lV~-le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~-~-~ 177 (366)
T PRK07582 116 TVREAPTAGM------AE---A-AL--AGADLVL-AETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL-G-Q 177 (366)
T ss_pred EEEEECCCCh------HH---H-hc--cCceEEE-EECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc-c-c
Confidence 9888875211 11 1 11 2334444 5899999998764 7889999999999999999996321 1 1
Q ss_pred ccchHHHHHhhhcCCeEEEEecccccc-cccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
. ++. .+.+ ++++|+||.+ |.+|+|+||+++ +++++.+++.. .......+++.+.+.++...|..
T Consensus 178 -~---p~~----~g~D-ivv~S~sK~l~G~~g~~~G~v~~--~~~~l~~~l~~----~~~~~g~~~~~~~a~l~~r~l~t 242 (366)
T PRK07582 178 -R---PLE----LGAD-LVVASDTKALTGHSDLLLGYVAG--RDPELMAAVER----WRLLAGAIPGPFEAWLAHRSLGT 242 (366)
T ss_pred -C---chh----cCCc-EEEecccccccCCCCeeEEEEEc--CcHHHHHHHHH----HHHHhCCCCCHHHHHHHHhcccc
Confidence 1 111 1223 6779999998 556899999875 45666665543 22233445677888888888876
Q ss_pred HHH
Q 047180 326 AEL 328 (337)
Q Consensus 326 ~~~ 328 (337)
-+.
T Consensus 243 l~~ 245 (366)
T PRK07582 243 LGL 245 (366)
T ss_pred HHH
Confidence 443
No 150
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.75 E-value=1.4e-16 Score=153.32 Aligned_cols=166 Identities=14% Similarity=0.076 Sum_probs=119.7
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch----HHHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH----HNIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y----~~~~~~~G~~~~~ 170 (337)
..+|.+.+|++. +.. . .+++++|+.++.+++..+.. |||+|+++.|.|+.. ...+...|++++.
T Consensus 61 ~~~le~~lA~l~-g~~------~---av~~~sG~~Ai~~~l~al~~--~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~ 128 (391)
T TIGR01328 61 VSNLEGRIAFLE-GTE------A---AVATSSGMGAIAATLLTILK--AGDHLISDECLYGCTFALLEHALTKFGIQVDF 128 (391)
T ss_pred HHHHHHHHHHHh-CCC------c---EEEECCHHHHHHHHHHHHhC--CCCEEEEecCcchHHHHHHHHHHhcCCeEEEE
Confidence 456999999986 321 1 36788888899888766655 899999999988753 3444568888887
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
+++. |++.+++.+.. +.+ ++++++|+||||.+.+ +++|+++|+++|+++|+|++|.....+ .
T Consensus 129 vd~~-------d~e~l~~~i~~--~tk-lV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~---~-- 190 (391)
T TIGR01328 129 INMA-------IPEEVKAHIKD--NTK-IVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT---N-- 190 (391)
T ss_pred ECCC-------CHHHHHHhhcc--CCe-EEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC---C--
Confidence 7641 68888887752 334 4445899999999987 667888899999999999999754321 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
++ ..+.+ +++.|+||.||.+|.|+|.+++ .+++++++++.
T Consensus 191 -~~----~~g~D-ivv~S~sK~lgg~g~~~gG~v~--~~~~li~~l~~ 230 (391)
T TIGR01328 191 -PV----ALGVD-VVVHSATKYIGGHGDVVAGLIC--GKAELLQQIRM 230 (391)
T ss_pred -ch----hcCCC-EEEccccccccCCCCceEEEEE--cCHHHHHHHHH
Confidence 11 11223 7779999999999998654443 46776666653
No 151
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.75 E-value=2.4e-16 Score=151.58 Aligned_cols=191 Identities=15% Similarity=0.071 Sum_probs=127.0
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhc----Ccee
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDA----HVTQ 168 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~----G~~~ 168 (337)
.-..+|.+.+|++. +. ++ .+.+.+|+.++.+++..+.. |||+|+++.|.|+.....++.. |.++
T Consensus 61 pt~~~Le~~lA~l~-G~------~~---al~~~sG~~Ai~~~l~al~~--~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~ 128 (386)
T PRK06767 61 PTVKLFEERMAVLE-GG------EE---ALAFGSGMAAISATLIGFLK--AGDHIICSNGLYGCTYGFLEVLEEKFMITH 128 (386)
T ss_pred cchHHHHHHHHHHh-CC------Cc---EEEECCHHHHHHHHHHHHhC--CCCEEEEcCCcHHHHHHHHHHHHhhcCeEE
Confidence 34678999999986 32 12 35677778888887766655 9999999999998876655433 4333
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
..+ ...|++.+++++.. +.++ +++++||||||.+++ +++|.++|+++++++|+|++|.....+ .
T Consensus 129 ~~~-------~~~d~~~l~~~i~~--~tkl-V~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~---~ 192 (386)
T PRK06767 129 SFC-------DMETEADIENKIRP--NTKL-IFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ---R 192 (386)
T ss_pred EEe-------CCCCHHHHHHhhCc--CceE-EEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC---C
Confidence 222 12478888887752 3344 445899999999997 567888889999999999999643221 1
Q ss_pred chHHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++ ..+. -+++.|+||.++.+|+|+ ||+++ +++.++++...... ...+..+.+.+.++...|+.
T Consensus 193 ---pl----~~g~-Div~~S~sK~l~g~g~~~gG~v~~---~~~~i~~~~~~~~~---~~g~~~~~~~a~l~~~~L~t 256 (386)
T PRK06767 193 ---PL----ELGC-DAVVHSATKYIGGHGDVVAGVTIC---KTRALAEKIRPMRK---DIGGIMAPFDAWLLLRGLKT 256 (386)
T ss_pred ---ch----hcCC-cEEEecCcceecCCCCceeEEEEe---ChHHHHHHHHHHHH---HhCCCCCHHHHHHHHcCCCc
Confidence 11 1122 367789999999999996 88764 45544444332222 11223455666666666664
No 152
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.74 E-value=7.8e-17 Score=155.17 Aligned_cols=186 Identities=15% Similarity=0.074 Sum_probs=123.7
Q ss_pred EEeeccchhHHHHHHHHHhhh--CCCC----eEEEcCCCCcchHHHHHhcCceeeEeeecc--CCCCC----CChHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRF--HPDS----QIYIPVPTWSNHHNIWRDAHVTQRTFHYYH--PGTKG----LDFAALMD 188 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~--~pgd----~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~--~~~~~----~d~~~l~~ 188 (337)
++.+++|++|+..+++++..+ .+|| +|++.+|.|+.+.......+......+... ..++. .|++.+++
T Consensus 91 v~~~~sGseA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 170 (389)
T PRK01278 91 VFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKA 170 (389)
T ss_pred EEEcCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHH
Confidence 578999999999998766432 2666 999999999999876665554422221100 01111 47889988
Q ss_pred HHHcCCCCeEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEe
Q 047180 189 DIKNAPNGSFFLLHACAHNPTG-VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQ 267 (337)
Q Consensus 189 ~l~~~~~~~~ili~~~p~NPTG-~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (337)
.+.. +.+++++ +.+|||+| .+++.+.+++|.++|++||+++|+||+|.+|.... .......+ ...++ +.
T Consensus 171 ~l~~--~~~aviv-ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~~~~-~~~pd---i~ 240 (389)
T PRK01278 171 AITP--NTAAILI-EPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTG---KLFAHEWA-GVTPD---IM 240 (389)
T ss_pred hhCC--CeEEEEE-ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCC---cceeeccc-CCCCC---EE
Confidence 8753 3345555 55688999 88999999999999999999999999999875311 00010011 11122 35
Q ss_pred cccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 268 SYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 268 S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
||||.++ +|+|+||+++ +++..+. +.........+.+.++|.++..+|+
T Consensus 241 t~sK~l~-~G~~ig~~~~---~~~~~~~----~~~~~~~~t~~~~~~~~aaa~a~l~ 289 (389)
T PRK01278 241 AVAKGIG-GGFPLGACLA---TEEAAKG----MTPGTHGSTYGGNPLAMAVGNAVLD 289 (389)
T ss_pred EEehhcc-CCcceEEEEE---cHHHHhc----cCCCCCCCCCCccHHHHHHHHHHHH
Confidence 8999999 8999999886 2333333 3322222333467788888866664
No 153
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.74 E-value=9.5e-17 Score=155.11 Aligned_cols=171 Identities=18% Similarity=0.079 Sum_probs=124.1
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh--hhCCCCeEEEcCCCCcc----hHHHHHhcCcee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK--RFHPDSQIYIPVPTWSN----HHNIWRDAHVTQ 168 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~--~~~pgd~Vlv~~P~y~~----y~~~~~~~G~~~ 168 (337)
+.++|+.+++++ +.. ++++ +++|.|+++++.+++..+. .+.+||+|++++|.|+. +...++..|+++
T Consensus 65 ~~~~r~~la~~~-g~~----~~~~--i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 137 (401)
T PRK10874 65 YEAAREQVAQLL-NAP----DAKN--IVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKV 137 (401)
T ss_pred HHHHHHHHHHHc-CCC----CCCE--EEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEE
Confidence 567888999976 321 2333 5789999999999987763 23489999999999865 556678899999
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
+.+|+. . ++.+|++.+++.+.+ + +.++++|+||||||.+++ +++|+++|+++|+++|+|++|...... .
T Consensus 138 ~~v~~~-~-~~~~d~~~l~~~i~~--~-t~lv~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~~-~-- 206 (401)
T PRK10874 138 VKLPLG-A-DRLPDVDLLPELITP--R-TRILALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHFP-A-- 206 (401)
T ss_pred EEEecC-C-CCcCCHHHHHHhcCc--C-cEEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCccccccc-C--
Confidence 999873 2 467899999998852 3 344555999999999986 467888899999999999998532110 1
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHH
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~ 295 (337)
+ +. ..+ --+++.|++|.||.+| +||+++ +++.+++
T Consensus 207 ~---~~---~~~-~d~~~~s~~K~~gp~G--~G~l~~---~~~~~~~ 241 (401)
T PRK10874 207 D---VQ---ALD-IDFYAFSGHKLYGPTG--IGVLYG---KSELLEA 241 (401)
T ss_pred C---ch---hcC-CCEEEEecccccCCCc--cEEEEE---chHHHhc
Confidence 1 11 111 2366789999999877 599885 4554443
No 154
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.74 E-value=1.6e-16 Score=153.62 Aligned_cols=191 Identities=18% Similarity=0.124 Sum_probs=130.9
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch----HHHHHhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH----HNIWRDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y----~~~~~~~G~~~~ 169 (337)
-..+|++.++++. +.. . .+.+.+|+.|+.+++..+.. |||+|+++.|+|+.. ...++..|++++
T Consensus 66 ~~~~le~~lA~l~-g~~------~---~i~~~sG~~Al~~~l~~ll~--~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~ 133 (403)
T PRK07503 66 TLALLEQRMASLE-GGE------A---AVALASGMGAITATLWTLLR--PGDEVIVDQTLYGCTFAFLHHGLGEFGVTVR 133 (403)
T ss_pred hHHHHHHHHHHHh-CCC------c---EEEEcCHHHHHHHHHHHHcC--CCCEEEEccCccchHHHHHHHHHhhCCEEEE
Confidence 3578999999875 321 1 35677888999888876654 999999999999753 334567898888
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++. .|++.+++.+.. +.+++++ ++|+||||.+.+ +++|+++|+++|++||+|++|.....+ .
T Consensus 134 ~vd~-------~d~~~l~~~i~~--~tklV~l-e~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~---~- 196 (403)
T PRK07503 134 HVDL-------TDPAALKAAISD--KTRMVYF-ETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ---R- 196 (403)
T ss_pred EeCC-------CCHHHHHHhcCc--cCcEEEE-eCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC---C-
Confidence 7765 268888888753 3345554 899999999986 677888899999999999999754321 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++. .+ .-+++.|+||.++.+| .|.|+++ .++++.++++.. ......-.+.+.+.+.++..-|+.
T Consensus 197 --~l~----~g-~Di~v~S~tK~l~g~gd~~gG~v~---~~~~l~~~l~~~--~~~~~~g~~~s~~~a~l~l~~L~t 261 (403)
T PRK07503 197 --PLE----LG-ADLVVHSATKYLGGHGDITAGLVV---GGKALADRIRLE--GLKDMTGAVMSPFDAFLLMRGLKT 261 (403)
T ss_pred --chh----hC-CCEEEccccccccCCCceeEEEEE---cCHHHHHHHHhh--hHHhCcCCCCCHHHHHHHHcCcch
Confidence 111 12 2378899999999876 6778775 366666665421 011111234566666666555554
No 155
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.74 E-value=1.5e-16 Score=153.96 Aligned_cols=252 Identities=13% Similarity=0.015 Sum_probs=148.8
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...||+..|.....-| ..+|.+.++..+ +.. ...|....|..++...+++.+...... ..+. ++.++||++
T Consensus 36 ~~~id~~~~~~~~~lG--~~~p~v~~a~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~--v~~~~sgse 107 (413)
T cd00610 36 NRYLDFLSGIGVLNLG--HNHPEVVEALKEQLAK--LTHFSLGFFYNEPAVELAELLLALTPE--GLDK--VFFVNSGTE 107 (413)
T ss_pred CEEEEcCccHHhhccC--CCCHHHHHHHHHHHHh--CcCccCcccCCHHHHHHHHHHHHhCCC--CCCE--EEEcCcHHH
Confidence 4578887763211112 134556665544 322 223433223444455555444332211 1233 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh-cCc------------eeeEeeeccC----CCCCCChHHHHHHHHc
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD-AHV------------TQRTFHYYHP----GTKGLDFAALMDDIKN 192 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~-~G~------------~~~~~~~~~~----~~~~~d~~~l~~~l~~ 192 (337)
|+..++.++..+.++++|++.+|+|..+...... .+. +++.+|.... ..+..|++.+++.+..
T Consensus 108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 187 (413)
T cd00610 108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE 187 (413)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc
Confidence 9999988775444789999999999997654433 222 2455554210 1234488899988875
Q ss_pred CCCCeEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccc
Q 047180 193 APNGSFFLLHACAHNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAK 271 (337)
Q Consensus 193 ~~~~~~ili~~~p~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 271 (337)
.+.+..+++....+|+||.++ +++++++|.++|+++++++|+||+|.+|... ....... ......+ +.||||
T Consensus 188 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~---g~~~~~~-~~~~~~d---~~t~sK 260 (413)
T cd00610 188 HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRT---GKMFAFE-HFGVEPD---IVTLGK 260 (413)
T ss_pred CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---cchhhHh-hcCCCCC---eEEEcc
Confidence 433444455455666779876 7888999999999999999999999987321 1111111 1111123 358999
Q ss_pred cccccccccceeEeeeCCHHHHHHHHHHHHhhhc-ccccCCChhHHHHHHHHhC
Q 047180 272 NMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLAR-PMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 272 ~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~~~~~~l~ 324 (337)
.++. |+|+||+++ ++++++.+. ...... .++ +.+.++|.++..+|+
T Consensus 261 ~l~~-g~~~g~~~~---~~~~~~~~~--~~~~~~~~t~-~~~~~~~~a~~a~l~ 307 (413)
T cd00610 261 GLGG-GLPLGAVLG---REEIMDAFP--AGPGLHGGTF-GGNPLACAAALAVLE 307 (413)
T ss_pred cccC-ccccEEEEE---cHHHHHhhc--cCCCCCCCCC-CcCHHHHHHHHHHHH
Confidence 9996 899999875 455544430 112211 233 345667777665553
No 156
>PRK02948 cysteine desulfurase; Provisional
Probab=99.74 E-value=5.4e-17 Score=155.76 Aligned_cols=199 Identities=14% Similarity=0.023 Sum_probs=130.9
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh--CCCCeEEEcCCCCcc---hHHHHHhcCceeeE
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF--HPDSQIYIPVPTWSN---HHNIWRDAHVTQRT 170 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~--~pgd~Vlv~~P~y~~---y~~~~~~~G~~~~~ 170 (337)
.++|+.+++++ +- ++++ ++.|.|+++++.+++..+... .+||+|++..+.|+. +...++..|++++.
T Consensus 46 ~~~r~~la~~~-g~-----~~~~--i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~ 117 (381)
T PRK02948 46 QVCRKTFAEMI-GG-----EEQG--IYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTE 117 (381)
T ss_pred HHHHHHHHHHh-CC-----CCCe--EEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEE
Confidence 46777788775 21 1333 578899999998887666421 268999999955554 45556778999999
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
+++. . ++.+|++.+++.+.+ +..++++++||||||.+++ +++|.++|+++++++++|+ |+.+...+.+
T Consensus 118 v~~~-~-~~~~d~~~l~~~l~~---~~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~vivD~-~~~~g~~~~~--- 185 (381)
T PRK02948 118 IPVD-K-SGLIRLVDLERAITP---DTVLASIQHANSEIGTIQP---IAEIGALLKKYNVLFHSDC-VQTFGKLPID--- 185 (381)
T ss_pred EeeC-C-CCCCCHHHHHHhcCC---CCEEEEEECCcCCcEeehh---HHHHHHHHHHcCCEEEEEC-hhhccccccC---
Confidence 9873 2 467899999988752 3445556899999999987 4578888999999999995 4455321111
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHH-HHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQ-AVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+... ...+++.|++|.||.+| +|++++. ++. ...+............+.++.+++.++..+|++
T Consensus 186 -----~~~~-~~d~~~~s~~K~~gp~G--~G~l~~~---~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~ 250 (381)
T PRK02948 186 -----VFEM-GIDSLSVSAHKIYGPKG--VGAVYIN---PQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAEN 250 (381)
T ss_pred -----cccC-CCCEEEecHHhcCCCCc--EEEEEEc---CCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHH
Confidence 1111 24566789999999999 7998762 221 010100000000112345777788888888764
No 157
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.73 E-value=4.8e-17 Score=157.97 Aligned_cols=156 Identities=17% Similarity=0.087 Sum_probs=118.4
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch----HHHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH----HNIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y----~~~~~~~G~~~~~ 170 (337)
..+|++.+|++. +. + ..+++.+|+.|+..++..+.. +||+|++++|.|+.. ...++..|.+++.
T Consensus 59 ~~~le~~lA~l~-g~-------~--~~v~~~sG~~Ai~~al~~l~~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 126 (418)
T TIGR01326 59 TDVLEQRIAALE-GG-------V--AALAVASGQAAITYAILNLAQ--AGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRF 126 (418)
T ss_pred HHHHHHHHHHHh-CC-------C--eEEEEccHHHHHHHHHHHHhC--CCCEEEEECCCcHHHHHHHHHHHHHcCcEEEE
Confidence 467889999875 31 1 146889999999888866655 899999999998753 3445678999888
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++. .|++.+++.+.. +.+++++ ++|+||||.+.+ +++|+++|+++++++|+|++|..... .
T Consensus 127 v~~-------~d~~~l~~~l~~--~t~~V~l-e~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~----~-- 187 (418)
T TIGR01326 127 VDP-------DDPEEFEKAIDE--NTKAVFA-ETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL----C-- 187 (418)
T ss_pred ECC-------CCHHHHHHhcCc--CCeEEEE-ECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc----C--
Confidence 763 178889888753 3345554 799999999986 67888999999999999999863211 0
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
..+ .. ...+++.||||.++.+|+|+||+++.
T Consensus 188 ---~~l-~~-g~Divv~S~sK~l~g~G~~lGg~v~~ 218 (418)
T TIGR01326 188 ---RPI-DH-GADIVVHSATKYIGGHGTAIGGVIVD 218 (418)
T ss_pred ---Cch-hc-CCeEEEECccccccCCccceEEEEEe
Confidence 111 11 24688999999999999999999874
No 158
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.73 E-value=4.3e-16 Score=148.68 Aligned_cols=203 Identities=16% Similarity=0.053 Sum_probs=141.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
..+||.+ |... .-|...+++.+.+++++..+ .|. +.+++++++.+++.+..+. ++ ++.|+|++.|
T Consensus 8 ~~~ina~-g~~t-~~g~s~~~~~v~~a~~~~~~----~~~---~~~~~~~~~~~~~a~~~g~----~~--~~~~~g~t~a 72 (363)
T TIGR01437 8 KKVINAS-GKMT-ILGVSTVSDEVADAQKRGAQ----NYF---EIKELVNKTGEYIANLLGV----ED--AVIVSSASAG 72 (363)
T ss_pred ceEEECC-cEee-cCCCCCCCHHHHHHHHHHHh----cCC---CHHHHHHHHHHHHHHhhCC----Ce--EEEEcCHHHH
Confidence 3566643 3332 22345577888888776411 143 4567777777766443221 23 4789999999
Q ss_pred HHHHHHHHhhhCCCC---------------eEEEcCCCCcch----HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHH
Q 047180 131 CRLFADFQKRFHPDS---------------QIYIPVPTWSNH----HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIK 191 (337)
Q Consensus 131 l~~~~~~l~~~~pgd---------------~Vlv~~P~y~~y----~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~ 191 (337)
+.+++..+.. +|| +|+++.|.|..| ...+...|++++.++. ++.+|++.+++++.
T Consensus 73 l~~al~al~~--~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~ 146 (363)
T TIGR01437 73 IAQSVAAVIT--RGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAIT 146 (363)
T ss_pred HHHHHHHHhc--CCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcC
Confidence 9999887765 787 999999999887 4677889999998865 35699999999986
Q ss_pred cCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccc
Q 047180 192 NAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAK 271 (337)
Q Consensus 192 ~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 271 (337)
+ +.+.+++.++||||+|.+.+. ++|+++|+++|+++|+|++|..- . ......+. -+++.|++|
T Consensus 147 ~--~t~ai~~v~~~~~~~g~~~~~---~~i~~~a~~~gi~vivD~a~~~~----~-------~~~~~~g~-D~~~~S~~K 209 (363)
T TIGR01437 147 E--KTAAILYIKSHHCVQKSMLSV---EDAAQVAQEHNLPLIVDAAAEED----L-------QKYYRLGA-DLVIYSGAK 209 (363)
T ss_pred h--hceEEEEEecCCCCcCCcCCH---HHHHHHHHHcCCeEEEECCCCCc----h-------HHHHHcCC-CEEEEeCCc
Confidence 3 334555457899999999985 56799999999999999999611 1 11111222 356688999
Q ss_pred cccccccccceeEeeeCCHHHHHHH
Q 047180 272 NMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 272 ~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
.+ +|+|.|+++. +++.++.+
T Consensus 210 ~l--~gp~~G~l~~---~~~~i~~~ 229 (363)
T TIGR01437 210 AI--EGPTSGLVLG---KKKYIEWV 229 (363)
T ss_pred cc--CCCceEEEEE---cHHHHHHH
Confidence 76 5899999874 45454443
No 159
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.73 E-value=2.3e-16 Score=152.06 Aligned_cols=196 Identities=15% Similarity=0.069 Sum_probs=131.2
Q ss_pred ccchHHHHHHHH-hcC---cCCCCCCCCCC----CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh
Q 047180 69 VVLECVREAERR-IAG---TANMEYLPMGG----SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR 140 (337)
Q Consensus 69 ~~~~~v~~a~~~-~~~---~~~~~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~ 140 (337)
.+++.+.++..+ +.. .....|....+ ..++|+.+++++ +.. +++ ++.+.|+++++.+++..+..
T Consensus 28 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~-~~~-----~~~--v~~~~~~t~~l~~~~~~~~~ 99 (397)
T TIGR01976 28 QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL-NAD-----PPE--VVFGANATSLTFLLSRAISR 99 (397)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc-CCC-----CCe--EEEeCCHHHHHHHHHHHHHh
Confidence 456667776654 321 11123544334 357888899876 321 222 56788899998877765532
Q ss_pred -hCCCCeEEEcCCCCcchH----HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCH
Q 047180 141 -FHPDSQIYIPVPTWSNHH----NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSE 215 (337)
Q Consensus 141 -~~pgd~Vlv~~P~y~~y~----~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~ 215 (337)
+.|||+|++++|.|+... ..++..|++++.+++. ++++.+|++.+++.+.+ ++.++++++|+||||.+++
T Consensus 100 ~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~~~i~~---~~~lv~i~~~~n~tG~~~~- 174 (397)
T TIGR01976 100 RWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVD-EATGELHPDDLASLLSP---RTRLVAVTAASNTLGSIVD- 174 (397)
T ss_pred cCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecc-ccCCCcCHHHHHHhcCC---CceEEEEeCCCCCCCccCC-
Confidence 348999999999987643 4567789999999873 33477899999988852 3345555899999999986
Q ss_pred HHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHH
Q 047180 216 EQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 216 ~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~ 295 (337)
+++|+++|+++|+++++|+++.. ..... .+.+.+.+ +++.|++|.|| +|+||+++ +++.++.
T Consensus 175 --~~~i~~~~~~~~~~~ivD~a~~~-~~~~~--------~~~~~~~d-~~~~s~~K~~g---~~~G~l~~---~~~~~~~ 236 (397)
T TIGR01976 175 --LAAITELVHAAGALVVVDAVHYA-PHGLI--------DVQATGAD-FLTCSAYKFFG---PHMGILWG---RPELLMN 236 (397)
T ss_pred --HHHHHHHHHHcCCEEEEehhhhc-cccCC--------CHHHcCCC-EEEEechhhcC---CceEEEEE---cHHHHhh
Confidence 77888899999999999998731 11000 11222333 44579999885 57999886 4444443
No 160
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.72 E-value=5.7e-16 Score=148.01 Aligned_cols=188 Identities=13% Similarity=0.128 Sum_probs=129.9
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch----HHHHHhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH----HNIWRDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y----~~~~~~~G~~~~ 169 (337)
-..+|.+.++++. +.. . .+.+.||++++.+++.++ . |||+|++++|+|+.. ...++..|++++
T Consensus 53 t~~~le~~la~l~-g~~------~---~~~~~sG~~ai~~~~~ll-~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~ 119 (366)
T PRK08247 53 TRGVLEQAIADLE-GGD------Q---GFACSSGMAAIQLVMSLF-R--SGDELIVSSDLYGGTYRLFEEHWKKWNVRFV 119 (366)
T ss_pred hHHHHHHHHHHHh-CCC------c---EEEEcCHHHHHHHHHHHh-C--CCCEEEEecCCcCcHHHHHHHHhhccCceEE
Confidence 4567999999986 321 1 357888899998776433 4 899999999999974 445566898888
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++. .|++.+++++.. +.++++ +++|+|||| +..++++|+++|+++++++|+|++|..-... .
T Consensus 120 ~vd~-------~d~~~l~~~i~~--~tklv~-le~P~NP~~---~~~dl~~I~~la~~~g~~lIvD~t~~~~~~~---~- 182 (366)
T PRK08247 120 YVNT-------ASLKAIEQAITP--NTKAIF-IETPTNPLM---QETDIAAIAKIAKKHGLLLIVDNTFYTPVLQ---R- 182 (366)
T ss_pred EECC-------CCHHHHHHhccc--CceEEE-EECCCCCCC---cHHHHHHHHHHHHHcCCEEEEECCCcccccc---C-
Confidence 7754 378889888753 334444 489999975 5688999999999999999999999532211 1
Q ss_pred hHHHHHhhhcCCeEEEEeccccccccc-ccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLY-GQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
++ . ....++++|+||.++-+ +++.|+++. +++++.+++.. .......+.+.+.|.++...|+
T Consensus 183 --p~----~-~g~di~i~S~sK~~~g~~d~~~G~iv~--~~~~l~~~~~~----~~~~~g~~~s~~~a~l~~~~l~ 245 (366)
T PRK08247 183 --PL----E-EGADIVIHSATKYLGGHNDVLAGLVVA--KGQELCERLAY----YQNAAGAVLSPFDSWLLIRGMK 245 (366)
T ss_pred --ch----h-cCCcEEEeecceeccCCCceeeeEEec--ChHHHHHHHHH----HHHhcCCCCChHHHHHHHhccC
Confidence 11 1 12458899999999732 468999875 44555555442 2222223455677877766665
No 161
>PRK07179 hypothetical protein; Provisional
Probab=99.72 E-value=8.8e-16 Score=148.75 Aligned_cols=168 Identities=16% Similarity=0.108 Sum_probs=119.9
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY 174 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~ 174 (337)
..+|.+.+++++ +. +. .++++||++|..+++..+.. +||.|++..+.++.....++..|.+++.++.
T Consensus 101 ~~~le~~la~~~-g~-------~~--~~~~~sG~~An~~~l~~l~~--~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~- 167 (407)
T PRK07179 101 KPQFEKKLAAFT-GF-------ES--CLLCQSGWAANVGLLQTIAD--PNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH- 167 (407)
T ss_pred HHHHHHHHHHHh-CC-------Cc--EEEECCHHHHHHHHHHHhCC--CCCEEEEECCcCHHHHHHHHHCCCeEEEecC-
Confidence 467888888876 32 12 35799999999998888776 8999999999998888778888888765532
Q ss_pred cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHH
Q 047180 175 HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIR 254 (337)
Q Consensus 175 ~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 254 (337)
.|++.+++.+.+. ++.++++++||||||.+.+ +++|+++|+++|+++|+||+|.....+. .......
T Consensus 168 ------~d~~~l~~~l~~~--~~~lV~v~~v~n~tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~--~g~g~~~ 234 (407)
T PRK07179 168 ------NDVDHLRRQIERH--GPGIIVVDSVYSTTGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGP--QGAGLVA 234 (407)
T ss_pred ------CCHHHHHHHHHhc--CCeEEEECCCCCCCCcccc---HHHHHHHHHHcCCEEEEECcccccCcCC--CCCchHH
Confidence 4889999888632 2344555889999999999 5678899999999999999997433221 1111111
Q ss_pred HhhhcCCe-EEEEecccccccccccccceeEeeeCCHHHHHH
Q 047180 255 IFLKDGHL-LGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 255 ~~~~~~~~-~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~ 295 (337)
.+ ....+ .+++.||||.|| .|+||+++ ++++++.
T Consensus 235 ~~-~~~~~vdi~~~S~sK~~g---~~~G~l~~---~~~~~~~ 269 (407)
T PRK07179 235 EL-GLTSRVHFITASLAKAFA---GRAGIITC---PRELAEY 269 (407)
T ss_pred hc-CCCCCCCEEEeechHhhh---ccCeEEEe---CHHHHHH
Confidence 12 11123 377899999997 37999875 3444443
No 162
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.72 E-value=4e-16 Score=151.05 Aligned_cols=164 Identities=15% Similarity=0.061 Sum_probs=119.5
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh--hhCCCCeEEEcCCCCcc----hHHHHHhcCcee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK--RFHPDSQIYIPVPTWSN----HHNIWRDAHVTQ 168 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~--~~~pgd~Vlv~~P~y~~----y~~~~~~~G~~~ 168 (337)
..++|+++++++... ++++ +++|.|+++++.+++..+. .+.+||+|+++++.|+. |...++..|+++
T Consensus 69 ~~~~r~~la~~~~~~-----~~~~--v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v 141 (406)
T PRK09295 69 MENVRKQAALFINAR-----SAEE--LVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAEL 141 (406)
T ss_pred HHHHHHHHHHHcCcC-----CCCe--EEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 457888899886321 1333 5789999999998886542 22389999999988764 455667789999
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
+.+++. . ++.+|++.+++.+.+ + +.++++++||||||.+++ +++|+++|+++++++++|++|...... +
T Consensus 142 ~~v~~~-~-~~~~d~~~l~~~i~~--~-t~lv~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~~~-~-- 210 (406)
T PRK09295 142 RVIPLN-P-DGTLQLETLPALFDE--R-TRLLAITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMHHP-V-- 210 (406)
T ss_pred EEEecC-C-CCCCCHHHHHHhcCC--C-cEEEEEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCccc-c--
Confidence 999873 2 467899999988753 3 344555899999999998 566888899999999999998643211 1
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+ +...+ --+++.|++|.+|.+| +||+++
T Consensus 211 ~------~~~~~-~D~~~~s~~K~~gp~G--~G~l~~ 238 (406)
T PRK09295 211 D------VQALD-CDFYVFSGHKLYGPTG--IGILYV 238 (406)
T ss_pred C------chhcC-CCEEEeehhhccCCCC--cEEEEE
Confidence 1 11112 2366788999999777 799986
No 163
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.72 E-value=1.8e-16 Score=149.86 Aligned_cols=201 Identities=12% Similarity=0.001 Sum_probs=139.0
Q ss_pred hHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-C--------
Q 047180 72 ECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF-H-------- 142 (337)
Q Consensus 72 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~-~-------- 142 (337)
..+.+.+..........|....|..++++++++|+.+..+...++. .++.|.||++++.+++.++... .
T Consensus 13 ~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~--~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~ 90 (345)
T cd06450 13 ALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSEDA--DGVFTSGGSESNLLALLAARDRARKRLKAGGG 90 (345)
T ss_pred HHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCCC--CEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence 3345555444222234588888999999999999854322211122 3578999999999888776431 0
Q ss_pred -C--CCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---CCCCeEEEEeCCCCCCCCCCCCHH
Q 047180 143 -P--DSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---APNGSFFLLHACAHNPTGVDPSEE 216 (337)
Q Consensus 143 -p--gd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~~ili~~~p~NPTG~~~s~~ 216 (337)
+ +++|++++++|+.+...++..|.+++.+|+. + ++.+|++.+++.+.+ ...++.+++.++|+||||.+ +
T Consensus 91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~---~ 165 (345)
T cd06450 91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVD-E-DGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI---D 165 (345)
T ss_pred cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeC-C-CCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---C
Confidence 2 3489999999999999999899999999973 3 358999999998864 11134455558899999998 4
Q ss_pred HHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeE-EEEecccccccccccccceeEe
Q 047180 217 QWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLL-GLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 217 ~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~-i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
++++|+++|+++++++++|++|..+... ... ... . . ....++ .+..|++|.++ ++.++|++++
T Consensus 166 ~~~~i~~~~~~~~~~l~vD~a~~~~~~~-~~~-~~~-~-~-~~~~~~d~~~~s~~K~l~-~p~g~g~~~~ 229 (345)
T cd06450 166 PLEEIADLAEKYDLWLHVDAAYGGFLLP-FPE-PRH-L-D-FGIERVDSISVDPHKYGL-VPLGCSAVLV 229 (345)
T ss_pred CHHHHHHHHHHhCCeEEEechhhHHHhh-Chh-hHH-H-h-cCccccCEEEEchhHhhC-CCcchHHHHH
Confidence 5788999999999999999999876532 111 111 0 1 111233 34569999776 6789999864
No 164
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.70 E-value=7.3e-16 Score=148.95 Aligned_cols=165 Identities=16% Similarity=0.039 Sum_probs=121.1
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh--hhCCCCeEEEcCCCCcch----HHHHHhcCce
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK--RFHPDSQIYIPVPTWSNH----HNIWRDAHVT 167 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~--~~~pgd~Vlv~~P~y~~y----~~~~~~~G~~ 167 (337)
++.++|+.+++++ +.. .+++ +++|.|+++++.+++..+. ...+||+|++++|.|+.. ....+..|++
T Consensus 63 ~~~~~r~~ia~~~-~~~----~~~~--v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~ 135 (403)
T TIGR01979 63 AYEAVREKVAKFI-NAA----SDEE--IVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGAT 135 (403)
T ss_pred HHHHHHHHHHHHh-CcC----CCCe--EEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcE
Confidence 4568899999986 321 1233 5788999999998876652 123899999999987763 3556678999
Q ss_pred eeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCc
Q 047180 168 QRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPE 247 (337)
Q Consensus 168 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~ 247 (337)
++.++.. +++.+|++.+++.+.+ ++.++++++|+||||.+++ +++|.++|+++|+++|+|++|..... ++
T Consensus 136 ~~~v~~~--~~~~~~~~~l~~~i~~---~~~lv~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~~-~~- 205 (403)
T TIGR01979 136 LKFIPLD--DDGTLDLDDLEKLLTE---KTKLVAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPHM-PV- 205 (403)
T ss_pred EEEEecC--CCCCCCHHHHHHHhcc---CCeEEEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCcc-cc-
Confidence 9999874 3567899999998853 3344555889999999998 56788899999999999999853211 01
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+ +... ...+++.|++|.||++| +|++++
T Consensus 206 -~------~~~~-~~d~~~~s~~K~~gp~G--~g~l~~ 233 (403)
T TIGR01979 206 -D------VQAL-DCDFYVFSGHKMYGPTG--IGVLYG 233 (403)
T ss_pred -C------cccc-CCCEEEEecccccCCCC--ceEEEE
Confidence 0 1111 23477889999999777 899876
No 165
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.70 E-value=8.1e-16 Score=147.68 Aligned_cols=170 Identities=15% Similarity=0.090 Sum_probs=127.6
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH-hhhCCCCeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ-KRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l-~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
...+|++++++++ +.. . .+.|+||++|+.+++..+ .. |||+|++++|+|+.+...+...|++++.++
T Consensus 34 ~~~~le~~la~~~-g~~-------~--~v~~~sgt~al~lal~al~~~--~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd 101 (379)
T PRK11658 34 KNQALEQAFCQLT-GNQ-------H--AIAVSSATAGMHITLMALGIG--PGDEVITPSLTWVSTLNMIVLLGATPVMVD 101 (379)
T ss_pred hHHHHHHHHHHHh-CCC-------e--EEEECCHHHHHHHHHHHcCCC--CCCEEEECCCcHHHHHHHHHHcCCEEEEEe
Confidence 4789999999987 321 1 367889999999998776 34 899999999999999999999999999998
Q ss_pred eccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC-CCCCCCccchH
Q 047180 173 YYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG-FASGDPERDAK 251 (337)
Q Consensus 173 ~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~-~~~~~~~~~~~ 251 (337)
+ +.+++.+|++.+++.+.. + ..+++ |+||+|...+ +++|+++|+++|++||+|++|.- ..+.+ .
T Consensus 102 ~-~~~~~~~d~~~l~~~i~~--~-tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~a~a~g~~~~~--~--- 166 (379)
T PRK11658 102 V-DRDTLMVTPEAIEAAITP--R-TKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDAAHAVGTYYKG--R--- 166 (379)
T ss_pred c-CCCcCCcCHHHHHHhccc--C-CeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEECCCccCCeECC--e---
Confidence 7 444677899999998863 3 33343 5788999865 56788999999999999999963 22210 0
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
. ....+ +.+.||+|...++|.+.|+++. .++++.++++.
T Consensus 167 ~---~g~~g---~~~~Sf~~~K~l~~g~GG~v~~--~~~~~~~~~~~ 205 (379)
T PRK11658 167 H---IGARG---TAIFSFHAIKNITCAEGGLVVT--DDDELADRLRS 205 (379)
T ss_pred e---cCCCC---CEEEeCCCCCcCcccCceEEEE--CCHHHHHHHHH
Confidence 0 11112 2467888777778889898764 57777766653
No 166
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.70 E-value=1.4e-15 Score=146.47 Aligned_cols=174 Identities=14% Similarity=-0.008 Sum_probs=127.9
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~ 173 (337)
...++++.+|+++ +. +. +++|+|+++++.+++..+.. +||+|+++.+++......++..|++++.++.
T Consensus 64 ~~~~l~~~lA~~~-g~-------~~--~~~~~g~t~a~~~al~~l~~--~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~ 131 (387)
T PRK09331 64 PIADFHEDLAEFL-GM-------DE--ARVTHGAREGKFAVMHSLCK--KGDYVVLDGLAHYTSYVAAERAGLNVREVPK 131 (387)
T ss_pred HHHHHHHHHHHHh-CC-------Cc--EEEeCCHHHHHHHHHHHhcC--CCCEEEECCCchHHHHHHHHHcCCEEEEEeC
Confidence 4678999999986 32 12 35689999999988877765 8999999999987777778899999999986
Q ss_pred ccCCCCCCChHHHHHHHHcC----CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 174 YHPGTKGLDFAALMDDIKNA----PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 174 ~~~~~~~~d~~~l~~~l~~~----~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
....++.+|++.+++.+.+. .++..++++++|+||||...+ +++|+++|+++|+++++|++|..-..+ + +
T Consensus 132 ~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~~~-~--~ 205 (387)
T PRK09331 132 TGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGRMP-V--D 205 (387)
T ss_pred ccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCCcC-C--C
Confidence 21235779999999988642 112344445889999998754 778889999999999999998631110 1 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
.. ..+ .-+++.|++|+++ .+.|+||+++ +++.++.+
T Consensus 206 ---~~---~~g-~D~~~~s~~K~l~-~~~~~G~l~~---~~~~i~~~ 241 (387)
T PRK09331 206 ---GK---KLG-ADFIVGSGHKSMA-ASAPSGVLAT---TEEYADKV 241 (387)
T ss_pred ---HH---HcC-CCEEEeeCccccc-CCCCEEEEEE---CHHHHhhc
Confidence 11 112 2467789999998 4669999875 45555544
No 167
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.70 E-value=3.3e-16 Score=150.42 Aligned_cols=193 Identities=16% Similarity=0.052 Sum_probs=130.1
Q ss_pred cccchHHHHHHHHh-c-----CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh-
Q 047180 68 PVVLECVREAERRI-A-----GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR- 140 (337)
Q Consensus 68 ~~~~~~v~~a~~~~-~-----~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~- 140 (337)
.++++.|.+++.+. . ....+.|+ ..+.+.+++++++++...+. .++++ ++.|+|+++++.+++..+..
T Consensus 9 ~~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~~~~--~~~~~--i~~t~g~teal~~~~~~~~~~ 83 (382)
T TIGR03403 9 TMLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKGINA--RDLDD--IIITSCATESNNWVLKGVYFD 83 (382)
T ss_pred CCCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHHcCc--CCCCe--EEEeCCHHHHHHHHHHHHHHh
Confidence 44556677776553 1 11222343 34667899999888744331 12343 57899999999988875421
Q ss_pred -h-CC-CCeEEEcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCC
Q 047180 141 -F-HP-DSQIYIPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPS 214 (337)
Q Consensus 141 -~-~p-gd~Vlv~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s 214 (337)
+ .+ +|+|+++.+.||.|.. .++..|++++.+|+. + ++.+|++.+++.+.. + +.++++++||||||.+++
T Consensus 84 ~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~-~-~g~~d~~~l~~~i~~--~-t~lv~~~~~~n~tG~~~~ 158 (382)
T TIGR03403 84 EILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPIN-E-QGTITAEQVREAITE--K-TALVSVMWANNETGMIFP 158 (382)
T ss_pred hcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecC-C-CCCCCHHHHHHhccc--C-CeEEEEEcccCCCccccC
Confidence 1 24 4789999877766654 456689999999873 3 467899999988853 3 344555899999999998
Q ss_pred HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 215 EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 215 ~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
. ++|.++|+++|+++++|+++. +.. .. +. +...+.+ +++.|+.|.+|.+|+ |++++
T Consensus 159 ~---~~I~~la~~~g~~~ivD~a~~-~g~--~~-----~~-~~~~~~D-~~~~s~~K~~gp~G~--g~l~v 214 (382)
T TIGR03403 159 I---KEIGEICKERGVLFHTDAVQA-IGK--IP-----VD-VQKAGVD-FLSFSAHKFHGPKGV--GGLYI 214 (382)
T ss_pred H---HHHHHHHHHcCCEEEEechhh-cCC--Cc-----cC-ccccCCC-EEEEcchhhCCCCce--EEEEE
Confidence 5 578888899999999999965 211 10 11 1122334 677899999998884 77765
No 168
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.70 E-value=2.4e-15 Score=144.38 Aligned_cols=167 Identities=16% Similarity=0.136 Sum_probs=120.3
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc----hHHHHHhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSN----HHNIWRDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~----y~~~~~~~G~~~~ 169 (337)
-..+|++.++++. +.. . .+.+++|+.++.+++..+.. +||+|+++.+.|+. +...++..|.+++
T Consensus 55 ~~~~le~~la~l~-g~~-------~--~~~~~sG~~Ai~~al~al~~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~ 122 (380)
T TIGR01325 55 TVAAFEERIAALE-GAE-------R--AVATATGMSAIQAALMTLLQ--AGDHVVASRSLFGSTVGFISEILPRFGIEVS 122 (380)
T ss_pred hHHHHHHHHHHHh-CCC-------c--EEEECCHHHHHHHHHHHHhC--CCCEEEEecCCcchHHHHHHHHHHHhCCEEE
Confidence 3578999999875 321 1 35789999999988876655 89999999998875 3345677898888
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++. .|++.+++.+.. +.++ +++++|+||||.+.+ +++|.++|+++++++|+|++|...... .
T Consensus 123 ~v~~-------~d~~~l~~~i~~--~tkl-V~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~---~- 185 (380)
T TIGR01325 123 FVDP-------TDLNAWEAAVKP--NTKL-VFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQ---Q- 185 (380)
T ss_pred EECC-------CCHHHHHHhcCC--CceE-EEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC---C-
Confidence 7764 167888877752 3344 445899999999985 677888899999999999999765321 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
++. .+. -+++.|+||.++.+|.++|.+++ .+++.+++++.
T Consensus 186 --pl~----~g~-Divv~S~sK~l~g~g~~~gG~vv--~~~~~~~~l~~ 225 (380)
T TIGR01325 186 --PLK----LGA-DVVVYSATKHIDGQGRVMGGVIA--GSEELMAEVAV 225 (380)
T ss_pred --chh----hCC-CEEEeeccceecCCCCeEEEEEE--eCHHHHHHHHH
Confidence 111 122 36778999999988999844443 35566665554
No 169
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.70 E-value=1.8e-15 Score=143.27 Aligned_cols=199 Identities=16% Similarity=0.151 Sum_probs=131.9
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeE
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQI 147 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~V 147 (337)
..+++.+++++..........|. .-..++|+.+++++ +.. ++.+.++++.||++++..++..+.. +||+|
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~la~~~-~~~-----~~~~~i~~~~~gt~~l~~~~~~~~~--~~~~v 77 (355)
T TIGR03301 8 LSTSATVRDAMLVDWCHWDSEFN--DVTDQVRDRLLALA-GGD-----DNHTCVLLQGSGTFAVEATIGSLVP--RDGKL 77 (355)
T ss_pred CCCCHHHHHHhhhhccCCCHHHH--HHHHHHHHHHHHHh-cCC-----CCCcEEEEeCCcHHHHHHHHHhccC--CCCeE
Confidence 34567777776542111111232 22557888888876 321 2333456788999999998876654 67776
Q ss_pred EEcC-CCCcc-hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 148 YIPV-PTWSN-HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 148 lv~~-P~y~~-y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
++.+ ++|+. +...++..|.+++.++..+ ++.+|++.+++.+++.+ +..++++++++||||...+ +++|+++|
T Consensus 78 i~~~~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~-~~~~v~~~~~~~~~G~~~~---~~~i~~l~ 151 (355)
T TIGR03301 78 LVLINGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADP-DITHVATVHHETTTGILNP---LEAIAKVA 151 (355)
T ss_pred EEECCCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCC-CceEEEEEecCCcccchhH---HHHHHHHH
Confidence 6555 45554 5667788999999998732 47889999999887533 3344545789999999876 67899999
Q ss_pred HhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc-cccccccceeEeeeCCHHHHHHHH
Q 047180 226 KAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 226 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
+++++++|+|+++. +.. . + +. +... ..-+++.|++|.+ |++| +||+++ +++.++.+.
T Consensus 152 ~~~~~~livD~~~s-~g~--~--~---~~-~~~~-~~d~~~~s~~K~l~~~~G--~g~~~~---~~~~~~~~~ 209 (355)
T TIGR03301 152 RSHGAVLIVDAMSS-FGA--I--P---ID-IEEL-DVDALIASANKCLEGVPG--FGFVIA---RRDLLEASA 209 (355)
T ss_pred HHcCCEEEEEeccc-cCC--c--c---cc-hhhc-CccEEEecCCcccccCCc--eeEEEE---CHHHHHHhh
Confidence 99999999998653 321 1 1 10 1111 2346789999986 6666 699986 456555543
No 170
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.69 E-value=1.5e-15 Score=146.36 Aligned_cols=189 Identities=17% Similarity=0.151 Sum_probs=128.8
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~~~ 170 (337)
..+|.+.++++. +. + .++.++||++|+.+++..+.. |||+|++++|+|+.+.. .++..|.+++.
T Consensus 67 ~~~Le~~lA~l~-g~-------~--~~l~~~sgt~Ai~~~l~al~~--~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~ 134 (394)
T PRK07050 67 SLALAQRLAEIE-GG-------R--HALLQPSGLAAISLVYFGLVK--AGDDVLIPDNAYGPNRDHGEWLARDFGITVRF 134 (394)
T ss_pred HHHHHHHHHHHh-CC-------C--eEEEeccHHHHHHHHHHHHhC--CCCEEEEecCCcccHHHHHHHHHHhcCeEEEE
Confidence 456777788764 31 2 257899999999999877755 99999999999998764 45678988887
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++.. +.+.+++.+. ++.++ |++++|+|||| +..++++|+++|+++++++|+|++|..-.. +
T Consensus 135 vd~~-------~~~~l~~~i~--~~tkl-V~le~p~Np~~---~~~di~~I~~ia~~~gi~livD~a~a~~~~--~---- 195 (394)
T PRK07050 135 YDPL-------IGAGIADLIQ--PNTRL-IWLEAPGSVTM---EVPDVPAITAAARARGVVTAIDNTYSAGLA--F---- 195 (394)
T ss_pred ECCC-------CHHHHHHhcC--CCCeE-EEEECCCCCCc---cHhhHHHHHHHHHHcCCEEEEECCcccccc--c----
Confidence 6531 3466777765 23344 45589999996 567899999999999999999999864321 1
Q ss_pred HHHHHhhhcCCeEEEEeccccccc-ccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMG-LYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+.+. .+ .-+++.|+||.++ -.|.+.|+++. .++++.++++.. . ...-.+.+.+....+...|++
T Consensus 196 ---~~l~-~G-aDi~v~S~tK~~~g~~~~~gG~v~~--~~~~~~~~~~~~-~---~~~G~~~~~~~a~l~lr~l~t 260 (394)
T PRK07050 196 ---KPFE-HG-VDISVQALTKYQSGGSDVLMGATIT--ADAELHAKLKLA-R---MRLGIGVSADDCSLVLRGLPS 260 (394)
T ss_pred ---CHHH-cC-CeEEEEECCceecCCCCeeEEEEEE--CCHHHHHHHHHH-H---HhcCCCCCHHHHHHHHcCCCc
Confidence 1111 12 2478899999996 23456898775 566666655432 2 212234555555555444443
No 171
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.69 E-value=1.4e-15 Score=145.32 Aligned_cols=175 Identities=17% Similarity=0.123 Sum_probs=123.8
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch--HHHHHhcCceeeEe
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH--HNIWRDAHVTQRTF 171 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y--~~~~~~~G~~~~~~ 171 (337)
-..++|+.+++++... ++...+++|.+|++++..++..+.. +||+|++++++|... ...++..|++++.+
T Consensus 38 ~~~~~~~~l~~l~~~~------~~~~~i~~~~~gt~~l~~~~~~l~~--~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i 109 (368)
T PRK13479 38 LTASVRAKLVAIATGE------EGYTCVPLQGSGTFSVEAAIGSLVP--RDGKVLVPDNGAYGARIAQIAEYLGIAHVVL 109 (368)
T ss_pred HHHHHHHHHHHHhCCC------CCceEEEEcCCcHHHHHHHHHhccC--CCCeEEEEeCCchHHHHHHHHHHcCCcEEEE
Confidence 3567788888876321 2223357888999999999877765 899999999988765 37778899999999
Q ss_pred eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchH
Q 047180 172 HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
|+. . ++.+|++.+++.++..++ ..++.+++|+||||...+ +++|+++|+++++++|+| +|+.+... +
T Consensus 110 ~~~-~-~~~~d~~~l~~~l~~~~~-~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~~livD-a~~~~g~~----~-- 176 (368)
T PRK13479 110 DTG-E-DEPPDAAEVEAALAADPR-ITHVALVHCETTTGILNP---LDEIAAVAKRHGKRLIVD-AMSSFGAI----P-- 176 (368)
T ss_pred ECC-C-CCCCCHHHHHHHHHhCCC-CcEEEEEcccCccccccC---HHHHHHHHHHcCCEEEEE-cccccCCc----c--
Confidence 873 2 467899999998864332 234445889999999988 567888899999999999 55555321 1
Q ss_pred HHHHhhhcCCeEEEEeccccc-ccccccccceeEeeeCCHHHHHHHH
Q 047180 252 AIRIFLKDGHLLGLAQSYAKN-MGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~-~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
+. +...+.+ +++.|++|. +|++| +||+++ +++.++++.
T Consensus 177 -~~-~~~~~~d-~~v~s~~K~l~g~~G--~G~l~~---~~~~~~~~~ 215 (368)
T PRK13479 177 -ID-IAELGID-ALISSANKCIEGVPG--FGFVIA---RRSELEACK 215 (368)
T ss_pred -cc-ccccCce-EEEecCccccccCCC--ceEEEE---CHHHHHHhh
Confidence 11 1122234 555788996 47888 599986 455555443
No 172
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.69 E-value=1.6e-15 Score=145.29 Aligned_cols=171 Identities=16% Similarity=0.166 Sum_probs=122.4
Q ss_pred HHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccC
Q 047180 97 KMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHP 176 (337)
Q Consensus 97 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~ 176 (337)
.+++++.+++....+ .++ ++.|+||++|+.+++.++. ..|||+|++++|+|+.+...+...|++++.+++ ++
T Consensus 31 ~~~~~~e~~la~~~g----~~~--~v~~~sgt~aL~~~l~al~-~~pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~-d~ 102 (376)
T TIGR02379 31 PFSRRCETWLENRTG----TKK--ALLTPSCTAALEMAALLLD-IQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDI-RP 102 (376)
T ss_pred HHHHHHHHHHHHHhC----CCe--EEEeCCHHHHHHHHHHHcC-CCCcCEEEECCCCcHHHHHHHHHcCCEEEEEec-CC
Confidence 456666655533221 223 5789999999998887651 238999999999999999999999999999998 44
Q ss_pred CCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHh
Q 047180 177 GTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIF 256 (337)
Q Consensus 177 ~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 256 (337)
+++.+|++.++++++. + ..+++ |+||||...+ +++|+++|++++++||+|++|..... ++. ..+
T Consensus 103 ~~~~~d~~~le~~i~~--~-tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeDaa~~~g~~--~~~--~~~--- 166 (376)
T TIGR02379 103 DTMNIDETLIESAITH--R-TKAIV---PVHYAGVACD---MDTIMALANKHQLFVIEDAAQGVMST--YKG--RAL--- 166 (376)
T ss_pred CcCCCCHHHHHHhcCc--C-ceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEECccccCCc--cCC--ccc---
Confidence 4578999999988763 3 33443 5789999886 55788999999999999999876531 110 011
Q ss_pred hhcCCeEEEEeccc----ccccccccccceeEeeeCCHHHHHHHHH
Q 047180 257 LKDGHLLGLAQSYA----KNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 257 ~~~~~~~i~~~S~S----K~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
..+..+.+|| |.+. +|.+.|+++. .++++.++++.
T Consensus 167 ----g~~~~~~~fSf~~~K~l~-~g~~gG~v~~--~~~~~~~~~~~ 205 (376)
T TIGR02379 167 ----GSIGHLGTFSFHETKNYT-SGGEGGALLI--NDQAFIERAEI 205 (376)
T ss_pred ----CCCCCEEEEeCCCCCcCc-ccCCceEEEE--CCHHHHHHHHH
Confidence 1111233444 9897 6888999875 67887777654
No 173
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.69 E-value=2.8e-15 Score=144.88 Aligned_cols=189 Identities=14% Similarity=0.041 Sum_probs=131.6
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCC----CCcchHHHHHhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVP----TWSNHHNIWRDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P----~y~~y~~~~~~~G~~~~ 169 (337)
...+|.+.+|++.-.. ..+.+.+|+.|+..++..+.. |||+|+++.. +|..+...++..|++++
T Consensus 71 ~~~~le~~lA~l~g~~----------~al~~~sG~~Ai~~~l~all~--~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~ 138 (403)
T PRK07810 71 TVSMFEERLRLIEGAE----------ACFATASGMSAVFTALGALLG--AGDRLVAARSLFGSCFVVCNEILPRWGVETV 138 (403)
T ss_pred hHHHHHHHHHHHhCCC----------cEEEECChHHHHHHHHHHHhC--CCCEEEEccCCcchHHHHHHHHHHHcCcEEE
Confidence 3568899999986221 146788899998887766655 8999998874 44555566778899988
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++. .|++.+++++++ +.++|+ .++|+||||.+.+ +++|+++|+++++++|+|++|...... .
T Consensus 139 ~vd~-------~d~~~l~~ai~~--~tklV~-~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~---~- 201 (403)
T PRK07810 139 FVDG-------EDLSQWEEALSV--PTQAVF-FETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQ---R- 201 (403)
T ss_pred EECC-------CCHHHHHHhcCc--CceEEE-EECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccC---C-
Confidence 8753 378889888763 334544 4899999999985 778888999999999999999754321 1
Q ss_pred hHHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHH-HHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAV-AVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++. .+ --+++.|++|.++..|+++ |+++. +++.+. ++.. +.+....+++.+.+.++...|+.
T Consensus 202 --~~~----~g-aDivv~S~tK~l~g~g~~~gG~v~~---~~~~~~~~l~~----~~~~~g~~~s~~~a~l~l~~L~t 265 (403)
T PRK07810 202 --GLP----LG-ADVVVYSGTKHIDGQGRVLGGAILG---DREYIDGPVQK----LMRHTGPALSAFNAWVLLKGLET 265 (403)
T ss_pred --hhh----cC-CcEEEccCCceecCCcCceeEEEEe---ChHHHHHHHHH----HHHHhCCCCCHHHHHHHHhccCc
Confidence 111 12 2467889999999899998 66553 344332 2332 22222335677777777777765
No 174
>PRK05939 hypothetical protein; Provisional
Probab=99.69 E-value=1.7e-15 Score=146.10 Aligned_cols=162 Identities=14% Similarity=0.076 Sum_probs=120.1
Q ss_pred CCCCCCCCCH---HHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH---H
Q 047180 87 MEYLPMGGSV---KMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN---I 160 (337)
Q Consensus 87 ~~Y~~~~G~~---~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~---~ 160 (337)
+.|+- .|.| +|.+.++++.-+.+ .+.+.+|+.|+..++..+.. |||+|+++++.|+.+.. .
T Consensus 39 ~~Y~r-~g~p~~~~lE~~la~leg~~~----------~v~~ssG~~Ai~~~l~all~--~Gd~Vv~~~~~y~~t~~~~~~ 105 (397)
T PRK05939 39 FTYAR-QGTPTTAALEAKITKMEGGVG----------TVCFATGMAAIAAVFLTLLR--AGDHLVSSQFLFGNTNSLFGT 105 (397)
T ss_pred CCcCC-CCCHHHHHHHHHHHHHhCCCe----------EEEeCCHHHHHHHHHHHHcC--CCCEEEECCCccccHHHHHHH
Confidence 34543 3777 78888998752221 35666778999988876655 99999999999987543 4
Q ss_pred HHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC
Q 047180 161 WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG 240 (337)
Q Consensus 161 ~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~ 240 (337)
++..|++++.++. .|++.+++.+.. +.++++ +++|+||||.+ .++++|+++|+++|+++|+|++|..
T Consensus 106 l~~~G~~v~~v~~-------~d~e~l~~~l~~--~tklV~-vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~ 172 (397)
T PRK05939 106 LRGLGVEVTMVDA-------TDVQNVAAAIRP--NTRMVF-VETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTS 172 (397)
T ss_pred HHhcCCEEEEECC-------CCHHHHHHhCCC--CCeEEE-EECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccc
Confidence 6678988887764 278899888752 334444 47999999998 5689999999999999999999853
Q ss_pred CCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 241 FASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
-.. ++ + . .. ..-+++.|+||.|+..|.++|++++
T Consensus 173 ~~~--~~----~---~-~~-gaDivv~S~sK~~~g~g~~igg~v~ 206 (397)
T PRK05939 173 PWL--FR----P---K-DV-GASLVINSLSKYIAGHGNALGGAVT 206 (397)
T ss_pred ccc--cC----c---c-cc-CCEEEEecCeecccCCCCeEEEEEe
Confidence 210 10 0 0 11 2458889999999999999999876
No 175
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.68 E-value=6.6e-15 Score=136.18 Aligned_cols=222 Identities=21% Similarity=0.201 Sum_probs=142.5
Q ss_pred CCCCC-CCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh---C-C----------CCeEEE
Q 047180 85 ANMEY-LPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF---H-P----------DSQIYI 149 (337)
Q Consensus 85 ~~~~Y-~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~---~-p----------gd~Vlv 149 (337)
..-.| +-..|+++.|+..++.+ +. ++++ +..||++++.++..++... . + .-+.++
T Consensus 60 D~RNY~G~l~Gipe~r~l~a~ll-gv-----~~~~----viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLC 129 (425)
T PF12897_consen 60 DCRNYPGGLDGIPEARELFAELL-GV-----PPEN----VIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLC 129 (425)
T ss_dssp BTTSS-S-SS--HHHHHHHHHHH-TS------GGG----EEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEE
T ss_pred cccCCCCccCChHHHHHHHHHHh-CC-----CHHH----EEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEe
Confidence 35679 88899999999999987 32 2454 3457888888777655431 1 2 247899
Q ss_pred cCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH-HHhc
Q 047180 150 PVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQ-IKAK 228 (337)
Q Consensus 150 ~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~-~~~~ 228 (337)
|.|+|.-+..+.+..|.+.++||+.+ .++|.|.+++.+.+.+.-+-+.+.|-.+||||.+||.+..++|+.+ ....
T Consensus 130 PvPGYDRHFai~E~~Giemi~VpM~~---dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~ 206 (425)
T PF12897_consen 130 PVPGYDRHFAITEHFGIEMIPVPMTE---DGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAP 206 (425)
T ss_dssp EES--HHHHHHHHHCT-EEEEEEEET---TEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SST
T ss_pred cCCCchHHHHHHHhhCcEEEecCCCC---CCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCc
Confidence 99999999999999999999999953 6899999999887656567788889999999999999999999998 4468
Q ss_pred CceeEEcccCCCCCC-CCCccch-HHH-HHhhhc--CCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhh
Q 047180 229 GHFPFFDMAYQGFAS-GDPERDA-KAI-RIFLKD--GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQL 303 (337)
Q Consensus 229 ~~~ii~De~Y~~~~~-~~~~~~~-~~~-~~~~~~--~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~ 303 (337)
|+.|+-|.+|.-... ++..... ..+ ..+.+. .++++.+.|.||.-- ||-+|+|+.. +++.++.+++++..
T Consensus 207 DFRI~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf-~GaGva~~aa---S~~Nl~~~~~~~~~- 281 (425)
T PF12897_consen 207 DFRIFWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITF-PGAGVAFFAA---SEANLAWIKKHLSV- 281 (425)
T ss_dssp T-EEEEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS--TTSS-EEEEE----HHHHHHHHHHHHH-
T ss_pred CeEEEeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccccc-CCcceeeeec---CHHHHHHHHHHhcC-
Confidence 999999999963321 1111111 111 112222 368999999999875 8999999875 66777777776653
Q ss_pred hcccccCCChhHHHHHHHHhCCHH
Q 047180 304 ARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 304 ~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
+ ..++.-+.|..-..+|.|.+
T Consensus 282 -~--tIgpdKvNQLRHvrff~d~~ 302 (425)
T PF12897_consen 282 -Q--TIGPDKVNQLRHVRFFKDAE 302 (425)
T ss_dssp -H---S---HHHHHHHHHHHHSHH
T ss_pred -c--eeCccHHHHHHHHHHhcChh
Confidence 1 23578888999999999843
No 176
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.68 E-value=2e-15 Score=147.00 Aligned_cols=164 Identities=15% Similarity=0.089 Sum_probs=118.8
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh--hhCCCCeEEEcCCCCcc----hHHHHHhcCcee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK--RFHPDSQIYIPVPTWSN----HHNIWRDAHVTQ 168 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~--~~~pgd~Vlv~~P~y~~----y~~~~~~~G~~~ 168 (337)
..++|+.+++++... ++++ ++.|.|+++++.+++..+. .+.+||+|++++|.|+. |...++..|+++
T Consensus 78 ~~~~r~~la~~~~~~-----~~~~--v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v 150 (424)
T PLN02855 78 YELARKKVAAFINAS-----TSRE--IVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVL 150 (424)
T ss_pred HHHHHHHHHHHcCCC-----CCCE--EEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEE
Confidence 468899999986321 1233 5789999999998886532 23489999999997764 455667789999
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
+.+++. . ++.+|++.+++.+.. + +.++++++||||||.+++. ++|+++|+++++++++|++|.-- . .
T Consensus 151 ~~v~~~-~-~~~~~~~~l~~~i~~--~-t~lv~i~~~~n~tG~~~~~---~~I~~l~~~~g~~vivD~a~~~g-~--~-- 217 (424)
T PLN02855 151 KFVGLT-P-DEVLDVEQLKELLSE--K-TKLVATHHVSNVLGSILPV---EDIVHWAHAVGAKVLVDACQSVP-H--M-- 217 (424)
T ss_pred EEEecC-C-CCCcCHHHHHHHhcc--C-ceEEEEeCccccccccCCH---HHHHHHHHHcCCEEEEEhhhhcC-C--c--
Confidence 999873 2 356899999998853 3 3444558999999999985 57788899999999999998421 1 0
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
++. +...+. -+++.|++|.+|.+| +||+++
T Consensus 218 ---~~~-~~~~~~-d~~~~s~~K~~gp~G--~G~l~~ 247 (424)
T PLN02855 218 ---PVD-VQTLGA-DFLVASSHKMCGPTG--IGFLWG 247 (424)
T ss_pred ---CCC-chhcCC-CEEEeecccccCCCc--cEEEEE
Confidence 011 111222 356899999888766 899986
No 177
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.68 E-value=4.5e-15 Score=142.05 Aligned_cols=192 Identities=14% Similarity=0.030 Sum_probs=133.4
Q ss_pred CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----HHhcCce
Q 047180 92 MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----WRDAHVT 167 (337)
Q Consensus 92 ~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~~~~G~~ 167 (337)
..-..+|.+.++++. +.. . .+++.+|++|+.+++..+.. +||+|+++.|.|+..... ++..|.+
T Consensus 39 ~p~~~~le~~la~l~-g~~-------~--a~~~~sG~~Ai~~~l~~l~~--~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~ 106 (369)
T cd00614 39 NPTVDALEKKLAALE-GGE-------A--ALAFSSGMAAISTVLLALLK--AGDHVVASDDLYGGTYRLFERLLPKLGIE 106 (369)
T ss_pred ChhHHHHHHHHHHHH-CCC-------C--EEEEcCHHHHHHHHHHHHcC--CCCEEEECCCCcchHHHHHHHHHhhcCeE
Confidence 344678999999875 321 1 46788889999998877765 899999999999886543 4467888
Q ss_pred eeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCc
Q 047180 168 QRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPE 247 (337)
Q Consensus 168 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~ 247 (337)
++.++. -|++.+++++.+ +.++++ +.+|+||||.+.+ +++|+++|+++|+++|+|++|......
T Consensus 107 ~~~v~~-------~d~~~l~~~i~~--~~~~v~-~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~--- 170 (369)
T cd00614 107 VTFVDP-------DDPEALEAAIKP--ETKLVY-VESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ--- 170 (369)
T ss_pred EEEeCC-------CCHHHHHHhcCC--CCeEEE-EECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC---
Confidence 777654 157888887753 334444 4899999999987 668889999999999999998754321
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
. ++ ..+ .-+++.|+||.++.+| .+.||+++ .+++++++++.... ..-.+.+.+.+.++...|+.
T Consensus 171 ~---~~----~~g-~Divv~S~tK~l~g~~~~~gG~v~~--~~~~l~~~l~~~~~----~~g~~~~p~~a~~~l~~l~t 235 (369)
T cd00614 171 R---PL----ELG-ADIVVHSATKYIGGHSDVIAGVVVG--SGEALIQRLRFLRL----ALGTILSPFDAWLLLRGLKT 235 (369)
T ss_pred C---hh----hhC-CcEEEeccceeccCCCCceEEEEEe--CcHHHHHHHHHHHH----hhCCCCCHHHHHHHHcCCCC
Confidence 0 11 112 3478899999998776 78999875 34356665554222 12224555666666556654
No 178
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.68 E-value=1.2e-15 Score=128.41 Aligned_cols=166 Identities=22% Similarity=0.167 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH-HHHHhcCceeeEeeec
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH-NIWRDAHVTQRTFHYY 174 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~-~~~~~~G~~~~~~~~~ 174 (337)
.++++.+++++. . +.++ +++++|+++++.+++..+.. ++++|++++|+|+.+. ..++..|++++.++..
T Consensus 3 ~~~~~~l~~~~~-~-----~~~~--~~~~~~~t~a~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 72 (170)
T cd01494 3 EELEEKLARLLQ-P-----GNDK--AVFVPSGTGANEAALLALLG--PGDEVIVDANGHGSRYWVAAELAGAKPVPVPVD 72 (170)
T ss_pred HHHHHHHHHHcC-C-----CCCc--EEEeCCcHHHHHHHHHHhCC--CCCEEEEeecccceehhhHHHhcCCEEEEeccC
Confidence 578899998862 1 1233 46778999999999988765 7999999999999998 8889999999999874
Q ss_pred cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHH
Q 047180 175 HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIR 254 (337)
Q Consensus 175 ~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 254 (337)
+......+++.+++... ..+..+++.++|+||+|...+. ++|+++|+++++++|+|++|..+..... . .
T Consensus 73 ~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~--~---~- 141 (170)
T cd01494 73 DAGYGGLDVAILEELKA--KPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAP--G---V- 141 (170)
T ss_pred CCCccchhhhhhhhccc--cCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEeccccccccccc--c---c-
Confidence 32222223334544332 2344555568899999999876 7788889999999999999998764310 0 0
Q ss_pred HhhhcCCeEEEEecccccccccccccceeEe
Q 047180 255 IFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 255 ~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
.. ......+++.|++|.|+. .|+|++++
T Consensus 142 ~~-~~~~~d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 142 LI-PEGGADVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred cc-ccccCCEEEEEcccccCC--CceEEEEe
Confidence 01 112245777899999984 78999875
No 179
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.68 E-value=5.2e-15 Score=142.07 Aligned_cols=190 Identities=16% Similarity=0.103 Sum_probs=128.8
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----HHhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----WRDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~~~~G~~~~ 169 (337)
....|.+++|++. +. + .+++|+||++++.+++..+.. +||+|++++|+|+..... ....|.+++
T Consensus 54 t~~~Le~~lA~le-g~-------e--~ivvt~gg~~Ai~~~l~all~--~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~ 121 (388)
T PRK08861 54 NRGLLEQTLSELE-SG-------K--GAVVTNCGTSALNLWVSALLG--PDDLIVAPHDCYGGTYRLFNTRANKGDFKVQ 121 (388)
T ss_pred hHHHHHHHHHHHh-CC-------C--eEEEECCHHHHHHHHHHHHcC--CCCEEEEcCCchHHHHHHHHHHHhcCCeEEE
Confidence 4567889999986 31 2 257899999999999877655 999999999999963332 233466666
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++ ..|++.+++++.. +.++++ +++||||||.+++. ++|+++|+++++++|+|++|...... .
T Consensus 122 ~vd-------~~d~e~l~~~i~~--~tklV~-lesP~NPtG~v~dl---~~I~~la~~~gi~vIvDea~~~~~~~---~- 184 (388)
T PRK08861 122 FVD-------QSDAAALDAALAK--KPKLIL-LETPSNPLVRVVDI---AELCQKAKAVGALVAVDNTFLTPVLQ---K- 184 (388)
T ss_pred EEC-------CCCHHHHHHhcCc--CCeEEE-EECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCccccccC---C-
Confidence 553 2478888887753 334444 48999999999985 56788889999999999999754321 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccc-cccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGL-YGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++ +.+-. +++.|++|.++- .+.+.|++++ .++++.++++. +....-.+.+.+...++.+-|+.
T Consensus 185 --pl----~~GaD-ivv~S~tK~l~G~~d~~gG~i~~--~~~~~~~~~~~----~~~~~G~~~~p~~a~l~~rgl~T 248 (388)
T PRK08861 185 --PL----ELGAD-FVIHSTTKYINGHSDVIGGVLIT--KTKEHAEELAW----WGNCIGATGTPFDSYMTLRGIRT 248 (388)
T ss_pred --Cc----ccCCC-EEEeecceeccCCCcceeEEEEe--cHHHHHHHHHH----HHhccCCCCChHHHHHHHhcCCC
Confidence 11 11222 678899999974 3478898865 44555444432 22222234555666666666655
No 180
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.67 E-value=5.6e-15 Score=141.97 Aligned_cols=166 Identities=16% Similarity=0.098 Sum_probs=118.6
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH---hcCceeeE
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR---DAHVTQRT 170 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~---~~G~~~~~ 170 (337)
...+|++.+|+++ +. +. .+++++|+.|+.+++..+.. |||+|+++.|.|+.+...++ ..|.+++.
T Consensus 54 ~~~~lE~~lA~l~-g~-------~~--~l~~~sG~~Ai~~~l~~ll~--~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~ 121 (385)
T PRK08574 54 TLRPLEEALAKLE-GG-------VD--ALAFNSGMAAISTLFFSLLK--AGDRVVLPMEAYGTTLRLLKSLEKFGVKVVL 121 (385)
T ss_pred cHHHHHHHHHHHh-CC-------Cc--EEEeCCHHHHHHHHHHHHhC--CCCEEEEcCCCchhHHHHHHHhhccCcEEEE
Confidence 4678999999986 31 12 46788999999888766655 99999999999999877664 34665554
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
+ .+|.+.+++.+.+. +.++++ +++|+||||.+++ +++|+++|+++|++||+|++|..-.. + .
T Consensus 122 ~--------~~d~~~l~~~i~~~-~tklV~-ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~--~-~-- 183 (385)
T PRK08574 122 A--------YPSTEDIIEAIKEG-RTKLVF-IETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL--Y-R-- 183 (385)
T ss_pred E--------CCCHHHHHHhcCcc-CceEEE-EECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc--C-C--
Confidence 3 23678888877531 334454 5899999999998 56789999999999999999853211 1 1
Q ss_pred HHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~~~~ 297 (337)
++. .+ .-+++.|+||.++-+|.++ |++++ .+++..++++
T Consensus 184 -~l~----~G-aDivv~S~sK~l~g~~d~~gG~vi~--~~~~~~~~~~ 223 (385)
T PRK08574 184 -PLR----HG-ADFVVHSLTKYIAGHNDVVGGVAVA--WSGEFLEELW 223 (385)
T ss_pred -hhh----hC-CcEEEeeCceeecCCCCceeEEEEE--CcHHHHHHHH
Confidence 111 12 3478889999998778775 65554 4666655554
No 181
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.67 E-value=2.9e-15 Score=142.33 Aligned_cols=196 Identities=14% Similarity=0.046 Sum_probs=130.8
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCC--CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCC
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGG--SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDS 145 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G--~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd 145 (337)
+.+++.+.+|+.+.. ..+.| +... ..++++.+++++ +.. ++. .++.|.++++++.+++..+.. +||
T Consensus 8 ~~~~~~v~~a~~~~~--~~~~~-~~~~~~~~~~~~~la~~~-g~~-----~~~-~~~~~~~~t~al~~~~~~~~~--~g~ 75 (356)
T cd06451 8 SNVPPRVLKAMNRPM--LGHRS-PEFLALMDEILEGLRYVF-QTE-----NGL-TFLLSGSGTGAMEAALSNLLE--PGD 75 (356)
T ss_pred cCCCHHHHHHhCCCc--cCCCC-HHHHHHHHHHHHHHHHHh-cCC-----CCC-EEEEecCcHHHHHHHHHHhCC--CCC
Confidence 456677777664321 11222 2111 346677777765 321 222 246788889999988877755 899
Q ss_pred eEEEcCCCCcc--hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 047180 146 QIYIPVPTWSN--HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 146 ~Vlv~~P~y~~--y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~ 223 (337)
+|++++|+|+. +...++..|++++.+|.. + ++.+|++++++.+... +.+++++ ++||||||.+++ +++|.+
T Consensus 76 ~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~~~~~l~~~i~~~-~~~~v~i-~~~~~~~G~~~~---~~~i~~ 148 (356)
T cd06451 76 KVLVGVNGVFGDRWADMAERYGADVDVVEKP-W-GEAVSPEEIAEALEQH-DIKAVTL-THNETSTGVLNP---LEGIGA 148 (356)
T ss_pred EEEEecCCchhHHHHHHHHHhCCCeEEeecC-C-CCCCCHHHHHHHHhcc-CCCEEEE-eccCCCcccccC---HHHHHH
Confidence 99999988765 567788899999999873 3 4688999999988641 2334444 789999999988 556788
Q ss_pred HHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 224 QIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 224 ~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+|+++|+++++|++|. +.. . . +. +...+.. +++.|.+|.|+.+ .++||+++ +++.++.+
T Consensus 149 ~a~~~~~~li~D~~~~-~g~--~--~---~~-~~~~~~d-~~~~s~~K~l~~p-~g~G~l~~---~~~~~~~~ 207 (356)
T cd06451 149 LAKKHDALLIVDAVSS-LGG--E--P---FR-MDEWGVD-VAYTGSQKALGAP-PGLGPIAF---SERALERI 207 (356)
T ss_pred HHHhcCCEEEEeeehh-ccC--c--c---cc-ccccCcc-EEEecCchhccCC-CCcceeEE---CHHHHHHH
Confidence 8899999999999764 211 0 0 11 1111223 4567889999964 46899986 35554444
No 182
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.67 E-value=2.9e-15 Score=144.92 Aligned_cols=202 Identities=13% Similarity=0.016 Sum_probs=134.2
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeE
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQI 147 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~V 147 (337)
...++.|.+|+.. . ..+|. ..+..++++.+.+++....+. +.+.+ ++++.+|++++..++..+.+ |||+|
T Consensus 18 ~~~~~~V~~a~~~---~-~~~~~-~~~~~~~~~~~~~~l~~~~g~--~~~~~-vi~~~~gt~a~~~a~~~~~~--~Gd~V 87 (401)
T PLN02409 18 VNIPERVLRAMNR---P-NEDHR-SPAFPALTKELLEDVKYIFKT--KSGTP-FIFPTTGTGAWESALTNTLS--PGDKV 87 (401)
T ss_pred CCCCHHHHHHhcC---C-CCCCC-CHHHHHHHHHHHHHHHHHhCC--CCCCE-EEEeCCcHHHHHHHHHhcCC--CCCEE
Confidence 3455666665533 1 12232 346677777777766433221 12233 57778889998887765544 99999
Q ss_pred EEcCCCCcch--HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC-CCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 047180 148 YIPVPTWSNH--HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP-NGSFFLLHACAHNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 148 lv~~P~y~~y--~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~ili~~~p~NPTG~~~s~~~~~~l~~~ 224 (337)
++++|.|+.+ ...++..|++++.++... +..+|++.+++.++..+ .+..+++.++++||||.+++.+++.++++
T Consensus 88 lv~~~~~~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~- 164 (401)
T PLN02409 88 VSFRIGQFSLLWIDQMQRLNFDVDVVESPW--GQGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD- 164 (401)
T ss_pred EEeCCCchhHHHHHHHHHcCCceEEEECCC--CCCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-
Confidence 9999998766 467788899999998732 34589999999887421 12334444788999999999888877777
Q ss_pred HHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 225 IKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 225 ~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
|+++++++|+|+++. +.. . ++. +...+.. +++.|.+|.|+.|. ++||+++ +++.++++
T Consensus 165 ~~~~g~~~vvD~v~s-~g~--~-----~id-~~~~~~D-~~~~s~~K~l~~P~-G~G~l~~---~~~~~~~~ 222 (401)
T PLN02409 165 CAQHPALLLVDGVSS-IGA--L-----DFR-MDEWGVD-VALTGSQKALSLPT-GLGIVCA---SPKALEAS 222 (401)
T ss_pred hhccCcEEEEEcccc-cCC--c-----ccc-ccccCcc-EEEEcCccccCcCC-CcceeEE---CHHHHHHH
Confidence 999999999999875 211 1 011 1112223 55566699997643 7999986 45555554
No 183
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.66 E-value=2.9e-15 Score=146.85 Aligned_cols=201 Identities=14% Similarity=0.115 Sum_probs=130.9
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCC--CCHHHHHHHHHHH---hCCCCcccccCceeEEeecc
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMG--GSVKMVEETLKLA---YGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~--G~~~lr~aia~~~---~~~~~~~~~~~~i~~~~t~g 126 (337)
..++|+.|.+. ..++..+.++.... ....+|.|.. -.+..+++++++. ....+ .+.++ ++.|.|
T Consensus 69 ~~~~lg~g~~~-----~~~p~~~~~~~~~~--~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~--v~~~~g 137 (447)
T PRK00451 69 YPSFLGAGAYD-----HYIPAVVDHIISRS--EFYTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVAN--ASMYDG 137 (447)
T ss_pred CcccCcccccC-----CcCcHHHHHHHhch--hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcce--EEecCc
Confidence 56788888753 33445555443221 2223466611 1234666666432 22222 12233 568899
Q ss_pred chhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh----cCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEe
Q 047180 127 GTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD----AHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLH 202 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~----~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~ 202 (337)
+++++..++..+. ..+||+|++++|.|+.|...++. .|.+++.+|+ ++ + .+|++++++.++. +.++++ +
T Consensus 138 ~t~~~~~~~~a~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~-~~-~-~~d~~~l~~~i~~--~t~~v~-l 210 (447)
T PRK00451 138 ATALAEAALMAVR-ITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPY-ED-G-VTDLEALEAAVDD--DTAAVV-V 210 (447)
T ss_pred HHHHHHHHHHHHH-hcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecC-CC-C-CCCHHHHHHhcCC--CeEEEE-E
Confidence 9998887776553 12799999999999999987764 6999999987 33 4 7899999988852 334444 4
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE--cccCCCCCCCCCccchHHHHHhhhcCCeEEEE--eccccccccccc
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF--DMAYQGFASGDPERDAKAIRIFLKDGHLLGLA--QSYAKNMGLYGQ 278 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~--De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~S~SK~~~~~G~ 278 (337)
++| ||||.+.+ +++|+++|+++|+++++ |.+..++.. . ....+..+++. ++|||.|++.|+
T Consensus 211 ~~p-n~tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~~----~-------~~~~~~D~~~~s~~k~~~~~~~~Gp 275 (447)
T PRK00451 211 QYP-NFFGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLLK----P-------PGEYGADIVVGEGQPLGIPLSFGGP 275 (447)
T ss_pred ECC-CCCCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccCC----C-------cccCCCCEEEECCCcCCCCCCCCCC
Confidence 678 99999954 88889999999999988 443322210 0 01112233333 489999999999
Q ss_pred ccceeEe
Q 047180 279 RVGCLSV 285 (337)
Q Consensus 279 RvG~~~~ 285 (337)
|+||+++
T Consensus 276 g~G~l~~ 282 (447)
T PRK00451 276 YLGFFAT 282 (447)
T ss_pred CchHHHh
Confidence 9999976
No 184
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.66 E-value=2.8e-15 Score=145.83 Aligned_cols=156 Identities=15% Similarity=0.082 Sum_probs=116.2
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch----HHHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH----HNIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y----~~~~~~~G~~~~~ 170 (337)
...|.+.++++.-+. ..++|.+|++|+.+++..+.. +||+|+++.|.|+.- ...++..|++++.
T Consensus 66 ~~~Le~~lA~leg~~----------~al~~~sG~~Ai~~al~~ll~--~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~ 133 (431)
T PRK08248 66 TDVFEKRIAALEGGI----------GALAVSSGQAAITYSILNIAS--AGDEIVSSSSLYGGTYNLFAHTLPKLGITVKF 133 (431)
T ss_pred HHHHHHHHHHHhCCC----------cEEEECCHHHHHHHHHHHHhC--CCCEEEEccCchhhHHHHHHHHHHhCCEEEEE
Confidence 356778888875221 146899999999988766555 899999999998753 3456678999888
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++. .|++.+++++.. +.+++++ ++|+||||.+++. ++|+++|+++++++|+|++|..-. . .
T Consensus 134 vd~-------~d~e~l~~ai~~--~tklV~l-~sp~NPtG~v~di---~~I~~la~~~gi~vIvD~t~a~~~---~---~ 194 (431)
T PRK08248 134 VDP-------SDPENFEAAITD--KTKALFA-ETIGNPKGDVLDI---EAVAAIAHEHGIPLIVDNTFASPY---L---L 194 (431)
T ss_pred ECC-------CCHHHHHHhcCC--CCeEEEE-ECCCCCCCcccCH---HHHHHHHHHcCCEEEEeCCCCccc---c---C
Confidence 864 278889888753 3445555 7999999999985 578888999999999999985210 1 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
.++ +.+ .-+++.|++|.+|.+|.++|.+++.
T Consensus 195 ~pl----~~g-aDivv~S~tK~lgg~g~~~Gg~v~~ 225 (431)
T PRK08248 195 RPI----EHG-ADIVVHSATKFIGGHGTSIGGVIVD 225 (431)
T ss_pred Chh----HcC-CCEEEEcCccccCCCCCceEEEEEe
Confidence 111 122 3477799999999999999998873
No 185
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.66 E-value=3.8e-15 Score=142.36 Aligned_cols=172 Identities=18% Similarity=0.073 Sum_probs=121.4
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-CCCCeEEEcCCCCcch----HHHHHhcCceee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF-HPDSQIYIPVPTWSNH----HNIWRDAHVTQR 169 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~-~pgd~Vlv~~P~y~~y----~~~~~~~G~~~~ 169 (337)
..++|+.+++++ +.. ++++ +++|+|+++++.+++..+... .+||+|++++|+|+.. ....+..|++++
T Consensus 45 ~~~~~~~la~~~-~~~----~~~~--v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~ 117 (373)
T cd06453 45 YEAAREKVARFI-NAP----SPDE--IIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLK 117 (373)
T ss_pred HHHHHHHHHHHh-CCC----CCCe--EEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEE
Confidence 457888888876 321 1233 578999999999988776531 1789999999999884 334557899999
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.+++. .++.+|++++++.+.+ +. .++++++||||||.+++. ++|+++|++++++|++|++|...... + +
T Consensus 118 ~v~~~--~~~~~d~~~l~~~l~~--~~-~~v~~~~~~~~tG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~-~--~ 186 (373)
T cd06453 118 VVPVD--DDGQLDLEALEKLLTE--RT-KLVAVTHVSNVLGTINPV---KEIGEIAHEAGVPVLVDGAQSAGHMP-V--D 186 (373)
T ss_pred EeecC--CCCCcCHHHHHHHhcC--Cc-eEEEEeCcccccCCcCCH---HHHHHHHHHcCCEEEEEhhhhcCcee-e--e
Confidence 99873 2577999999998863 33 444458999999999884 67888899999999999998632110 0 0
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+...+. -+++.|+.|.|+. .++||+++ +++.++++
T Consensus 187 ------~~~~~~-d~~~~s~~K~~~~--~g~g~~~~---~~~~~~~~ 221 (373)
T cd06453 187 ------VQDLGC-DFLAFSGHKMLGP--TGIGVLYG---KEELLEEM 221 (373)
T ss_pred ------ccccCC-CEEEeccccccCC--CCcEEEEE---chHHhhcC
Confidence 111122 2455688899985 56899876 34444433
No 186
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.65 E-value=1.2e-14 Score=141.63 Aligned_cols=250 Identities=9% Similarity=-0.010 Sum_probs=149.7
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|.....-| ...|.+.+++.+ +... .+.+.+..+.+.. ..+++++........ .++ ++.+++|++
T Consensus 41 ~~~lD~~~g~~~~~lG--h~~~~i~~a~~~~~~~~-~~~~~~~~~~~~~-~~la~~l~~~~~~~~-~~~--~~f~~sGse 113 (425)
T PRK08088 41 REYLDFAGGIAVLNTG--HLHPKVVAAVEAQLKKL-SHTCFQVLAYEPY-LELCEKMNQKVPGDF-AKK--TLLVTTGSE 113 (425)
T ss_pred CEEEEcCCchhhcCCC--CCCHHHHHHHHHHHhhC-CCccccccCCHHH-HHHHHHHHHhCCCCC-CCE--EEEeCCcHH
Confidence 4578886663211111 124555555544 3221 2223333344443 366666644221111 123 356777778
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeE----------------eeeccCCCCCCC----hHHHHHH
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRT----------------FHYYHPGTKGLD----FAALMDD 189 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~----------------~~~~~~~~~~~d----~~~l~~~ 189 (337)
|...++.+...+.....|+..+|+|.+....+...+....+ +|. +. .+.+ ++.+++.
T Consensus 114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~--~~~~~~~~~~~l~~~ 190 (425)
T PRK08088 114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPC-PL--HGVSEDDAIASIERI 190 (425)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCc-cc--cCccHHHHHHHHHHH
Confidence 77777765544334456777799999987666554432111 111 01 1122 4557777
Q ss_pred HHc---CCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEE
Q 047180 190 IKN---APNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLA 266 (337)
Q Consensus 190 l~~---~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (337)
+.. ......+++-+..+||++..++++.+++|+++|+++++++|+||+|.++... ....+ +... ..+.-+
T Consensus 191 l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~---g~~~~---~~~~-~~~pdi 263 (425)
T PRK08088 191 FKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRT---GTLFA---MEQM-GVAADL 263 (425)
T ss_pred HHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---cchhH---Hhhc-CCCCCE
Confidence 752 1233567788999999999999999999999999999999999999987431 11111 1111 223447
Q ss_pred ecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 267 QSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 267 ~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
.||||.++ +|+|+||+++ +.++++.+. ........+.+.+.|.++..+|+.
T Consensus 264 ~s~sK~l~-~G~rig~v~~---~~~~~~~~~----~~~~~~t~~~~~~~~~a~~~~l~~ 314 (425)
T PRK08088 264 TTFAKSIA-GGFPLAGVTG---RAEVMDAIA----PGGLGGTYAGNPIACAAALAVLKV 314 (425)
T ss_pred EEEecccc-CCCcceeeEe---cHHHHhhcC----CCCCCCCCCcCHHHHHHHHHHHHH
Confidence 89999999 8999999986 345444443 222333334678899999999875
No 187
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.65 E-value=2e-14 Score=139.21 Aligned_cols=214 Identities=16% Similarity=0.066 Sum_probs=125.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCC------CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTAN------MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~------~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
...++|+.-.|- | ....|.+.+|+.+ +..... ..|.+..-..+|++.+++++ +. ++ .++
T Consensus 46 ~~~~~~~s~dyl---g-l~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~-g~------~~---~~~ 111 (407)
T PRK09064 46 REVTVWCSNDYL---G-MGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH-GK------EA---ALV 111 (407)
T ss_pred ceEEEEECCCCc---C-CCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh-CC------Cc---EEE
Confidence 346777765443 2 2345566666544 321111 11223334567888888875 31 12 234
Q ss_pred eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC-CCeEEEEe
Q 047180 124 SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP-NGSFFLLH 202 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~ili~ 202 (337)
.+.|.++...++.++....+++.|+.....+......++..|.++..++. .|++.+++.++... .+..++++
T Consensus 112 ~~sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~ 184 (407)
T PRK09064 112 FTSGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAF 184 (407)
T ss_pred ECcHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 44455565555544433236666666655555555556667776654432 36777777775322 23445555
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEecccccccccccccc
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQRVG 281 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG 281 (337)
++++||||.+.+ +++|.++|+++++++|+||+|..-.++.. .. ......+. ....++++||||.||++| |
T Consensus 185 ~~v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~--g~-g~~~~~~~~~~~div~~t~sKa~g~~G---G 255 (407)
T PRK09064 185 ESVYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPR--GG-GIAERDGLMDRIDIIEGTLAKAFGVMG---G 255 (407)
T ss_pred eCCCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCC--CC-ChHHhcCCCCCCeEEEEecchhhhccC---c
Confidence 899999999887 77788889999999999999972222211 11 11111111 123677899999999988 9
Q ss_pred eeEeeeCCHHHHHHHH
Q 047180 282 CLSVLCEDEKQAVAVK 297 (337)
Q Consensus 282 ~~~~~~~~~~~~~~~~ 297 (337)
|+++ ++++++.+.
T Consensus 256 ~~~~---~~~~~~~l~ 268 (407)
T PRK09064 256 YIAG---SAALVDAVR 268 (407)
T ss_pred eEec---CHHHHHHHH
Confidence 9864 555555443
No 188
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.64 E-value=2.3e-14 Score=137.33 Aligned_cols=246 Identities=13% Similarity=0.040 Sum_probs=147.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|.....-|. ..|.|.+|+.+ ++.. .+ + ...+..+++..+++++..... .+ .++.+++|++
T Consensus 29 ~~~lD~~s~~~~~~lG~--~~p~v~~a~~~~~~~~-~~-~-~~~~~~~~~~~la~~l~~~~~----~~--~~~~~~sG~~ 97 (377)
T PRK02936 29 KTYLDFTSGIAVCNLGH--CHPTVTKAVQEQLDDI-WH-V-SNLFTNSLQEEVASLLAENSA----GD--LVFFCNSGAE 97 (377)
T ss_pred CEEEECCcchhhccCCC--CCHHHHHHHHHHHHhc-cc-c-ccccCCHHHHHHHHHHHhcCC----CC--EEEEeCCcHH
Confidence 35788876641100121 34556665544 3221 11 1 223456889999998855421 12 2578899999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCceee---EeeeccCCCCC--CChHHHHHHHHcCCCCeEEEEeC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHVTQR---TFHYYHPGTKG--LDFAALMDDIKNAPNGSFFLLHA 203 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~~~~---~~~~~~~~~~~--~d~~~l~~~l~~~~~~~~ili~~ 203 (337)
|...++.+.......++|++.++.|+.... .+...|.... ..|+.....+. -|++.+++.+.. + ...++..
T Consensus 98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~--~-~~~ii~e 174 (377)
T PRK02936 98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNE--E-VAAVMLE 174 (377)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccC--C-eEEEEEe
Confidence 999888754322233679999999986432 2223332111 01111100011 167888887752 3 3444447
Q ss_pred CCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccce
Q 047180 204 CAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGC 282 (337)
Q Consensus 204 ~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~ 282 (337)
+++|++|.+ .+.+.+++|.++|++||+++|+||+|.+|... ....+...+ ...+++ .+|||.++ +|+|+||
T Consensus 175 ~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~---g~~~~~~~~-~~~~di---~t~sK~l~-~G~~ig~ 246 (377)
T PRK02936 175 VVQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRT---GTLFAYEQF-GLDPDI---VTVAKGLG-NGIPVGA 246 (377)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---chhhHHHhh-CCCCcE---EEEccccc-CCCccEE
Confidence 789999987 58999999999999999999999999987532 111111111 112333 36999999 8999999
Q ss_pred eEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 283 LSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 283 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+++ ++++.+.+ .........+.+.++|.++..+|+.
T Consensus 247 v~~---~~~~~~~~----~~~~~~~t~~~~~~~~aaa~a~l~~ 282 (377)
T PRK02936 247 MIG---KKELGTAF----GPGSHGSTFGGNPLAMAAAKEVLQV 282 (377)
T ss_pred EEE---cHHHHhhc----cCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 875 45544443 2222222224678899999888864
No 189
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.64 E-value=2.1e-14 Score=138.83 Aligned_cols=236 Identities=16% Similarity=0.061 Sum_probs=136.7
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCC--C----CCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEee
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTAN--M----EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQS 124 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~--~----~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 124 (337)
..++|+.-.|.. ....|.+.+|..+ +..-.. . -|....-..+|.+.+++++ +. ++ .+.+
T Consensus 46 ~~~~~~sn~ylg----l~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~-g~------~~---~l~~ 111 (402)
T TIGR01821 46 DVTVWCSNDYLG----MGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH-GK------ES---ALVF 111 (402)
T ss_pred eEEEeEccCcCC----CCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh-CC------Ce---EEEE
Confidence 467777665542 3345556655543 321110 0 1112223467888888876 32 11 3456
Q ss_pred ccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC-CCeEEEEeC
Q 047180 125 LSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP-NGSFFLLHA 203 (337)
Q Consensus 125 ~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~ili~~ 203 (337)
+.|+++...++.++....+++.|+.....+......++..|.+++.++. .|.+.+++.+.... .+..+++.+
T Consensus 112 ~sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e 184 (402)
T TIGR01821 112 TSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFE 184 (402)
T ss_pred CchHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEc
Confidence 6667777777666543335676666655555555566677776654432 26677777765332 234555569
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEecccccccccccccce
Q 047180 204 CAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQRVGC 282 (337)
Q Consensus 204 ~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~ 282 (337)
+|+||||.+.+ +++|.++|+++++++|+||+|..-.+++.-.. ....... ....++++||||.||++| ||
T Consensus 185 ~~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g---~~~~~~~~~~~div~~t~sKa~g~~G---G~ 255 (402)
T TIGR01821 185 SVYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGG---IAERDGLMHRIDIIEGTLAKAFGVVG---GY 255 (402)
T ss_pred CCCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCc---cchhccCCCCCeEEEEechhhhccCC---ce
Confidence 99999999987 67888899999999999999972222211011 1111111 123577899999999988 88
Q ss_pred eEeeeCCHHHHHHHHHHHHhhhcc-cc-cCCChhHHHHHHHHhC
Q 047180 283 LSVLCEDEKQAVAVKSQLQQLARP-MY-SNPPVHGALIVSTILG 324 (337)
Q Consensus 283 ~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~~~~q~~~~~~l~ 324 (337)
+++ ++++++.+.. .... .+ .+.+...+.++..+|+
T Consensus 256 i~~---~~~~~~~l~~----~~~~~~~t~~~~~~~~aaa~aaL~ 292 (402)
T TIGR01821 256 IAA---SRKLIDAIRS----YAPGFIFTTSLPPAIAAGATASIR 292 (402)
T ss_pred eec---CHHHHHHHHH----hCcCceecCcCCHHHHHHHHHHHH
Confidence 764 4555554432 2221 11 2345555666655554
No 190
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.63 E-value=3.4e-14 Score=137.22 Aligned_cols=185 Identities=12% Similarity=0.043 Sum_probs=116.6
Q ss_pred EEeeccchhHHHHHHHHHhhh-------CCC-CeEEEcCCCCcchH-HHHHhcCceeeE---eeeccC---CCCCCChHH
Q 047180 121 AVQSLSGTGACRLFADFQKRF-------HPD-SQIYIPVPTWSNHH-NIWRDAHVTQRT---FHYYHP---GTKGLDFAA 185 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~-------~pg-d~Vlv~~P~y~~y~-~~~~~~G~~~~~---~~~~~~---~~~~~d~~~ 185 (337)
++.+++|++|...++.+...+ .+| ++|+..+-+|.... ..+...|..... -|.... -.+ .|++.
T Consensus 100 ~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~ 178 (396)
T PRK04073 100 VLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-GDLEA 178 (396)
T ss_pred EEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-CCHHH
Confidence 567899999999888766432 134 67888877777653 344444321100 000000 001 26788
Q ss_pred HHHHHHcCCCCeEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEE
Q 047180 186 LMDDIKNAPNGSFFLLHACAHNPTGVDPSEE-QWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLG 264 (337)
Q Consensus 186 l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~-~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 264 (337)
+++.+.. + ..+++.++++||||.+++.+ .+++|.++|+++|+++|+||+|.+|... ....... .....+++
T Consensus 179 l~~~i~~--~-~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~---g~~~~~~-~~~~~pdi- 250 (396)
T PRK04073 179 LKAAITP--N-TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRT---GKLFACD-WDNVTPDM- 250 (396)
T ss_pred HHHhccc--C-eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcC---cHHHHhh-hcCCCCCE-
Confidence 8887742 3 34455577999999998764 6999999999999999999999987431 1111111 11112333
Q ss_pred EEecccccccccccccceeEeeeCCHHHHHHHHHHHHhh-hcccccCCChhHHHHHHHHhC
Q 047180 265 LAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQL-ARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 265 ~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.+|||.+|.+|+|+||+++ ++++.+.+ ... ...++ +.+.++|.++..+|+
T Consensus 251 --~~~sK~lg~gg~~ig~~~~---~~~i~~~~----~~~~~~~t~-~~~~~~~aaa~aaL~ 301 (396)
T PRK04073 251 --YILGKALGGGVFPISCVAA---NRDILGVF----TPGSHGSTF-GGNPLACAVSIAALE 301 (396)
T ss_pred --EEecccccCCCCcceEEEE---cHHHHhhh----cCCCCCCCC-CCCHHHHHHHHHHHH
Confidence 3589999998899999986 45544443 222 12334 457788888888886
No 191
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.63 E-value=1.7e-14 Score=139.61 Aligned_cols=178 Identities=12% Similarity=0.064 Sum_probs=114.0
Q ss_pred EEeeccchhHHHHHHHHHhhhC------CCCeEEEcCCCCcchHH-HHHhcCce------------eeEeeeccCCCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFH------PDSQIYIPVPTWSNHHN-IWRDAHVT------------QRTFHYYHPGTKGL 181 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~------pgd~Vlv~~P~y~~y~~-~~~~~G~~------------~~~~~~~~~~~~~~ 181 (337)
++.+++|++|...++.+...+. ..++|+..+-.|..... .+...|.. ++.+| --
T Consensus 100 ~~~~~sGseA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~ 172 (403)
T PRK05093 100 VFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-------FN 172 (403)
T ss_pred EEEeCchHHHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-------CC
Confidence 5778899999888887654321 23678888888887543 33322211 11111 11
Q ss_pred ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc
Q 047180 182 DFAALMDDIKNAPNGSFFLLHACAHNPTGVDP--SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD 259 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~--s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 259 (337)
|++.+++.+.. ...++++ + |.||+|.++ +.+.+++|+++|++||+++|+||+|.+|.+.. ...+...+ ..
T Consensus 173 d~~~l~~~l~~--~~aaiii-e-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g---~~~~~~~~-~~ 244 (403)
T PRK05093 173 DLAAVKAVIDD--HTCAVVV-E-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTG---DLFAYMHY-GV 244 (403)
T ss_pred CHHHHHHHhcC--CeEEEEE-e-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCc---cchhhhhc-CC
Confidence 78888887752 2334444 4 899999876 99999999999999999999999999885421 11111111 11
Q ss_pred CCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 260 GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 260 ~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.+. +.||||+++ +|||+||+++ ++++++. +.........+.+.+.|.++..+|+
T Consensus 245 ~pd---i~s~sK~l~-~G~rig~vv~---~~~i~~~----l~~~~~~~t~~~~~~~~~aa~a~L~ 298 (403)
T PRK05093 245 TPD---ILTSAKALG-GGFPIGAMLT---TAEIASH----FKVGTHGSTYGGNPLACAVAEAVFD 298 (403)
T ss_pred CCC---EEEeccccc-CCcceEEEEE---cHHHHhh----cCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 122 468999999 8999999986 3444333 3322222223467778988887543
No 192
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.63 E-value=7.3e-15 Score=142.79 Aligned_cols=156 Identities=17% Similarity=0.126 Sum_probs=113.7
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh----cCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD----AHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~----~G~~~~~ 170 (337)
..+|.+.++++. +. +. .+.+.+|++|+.+++..+.. +||+|+++.|.|+.....+.. .|.++..
T Consensus 60 ~~~Le~~lA~l~-g~------~~---~l~~ssG~~Ai~~al~al~~--~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~ 127 (425)
T PRK06084 60 NDVLEQRVAALE-GG------VG---ALAVASGMAAITYAIQTIAE--AGDNIVSVAKLYGGTYNLLAHTLPRIGIETRF 127 (425)
T ss_pred HHHHHHHHHHHh-CC------Cc---eeEehhHHHHHHHHHHHHhC--CCCEEEEeCCCcchHHHHHHHhcccceeEEEE
Confidence 357888888875 31 11 35788889999999877766 899999999999954444432 4544444
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++ ..|++.+++++.+ +.+++++ ++|+||||.+++ +++|+++|++++++||+|++|......
T Consensus 128 ~d-------~~d~e~le~ai~~--~tklV~l-esp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~~------ 188 (425)
T PRK06084 128 AA-------HDDIAALEALIDE--RTKAVFC-ESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVLC------ 188 (425)
T ss_pred EC-------CCCHHHHHHHhcc--CCcEEEE-eCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC------
Confidence 32 2478999988863 3345555 899999999998 678889999999999999999743211
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
.+ + ..+ --+++.|+||.++.+|.++|.+++.
T Consensus 189 ~p---~-~~g-aDivv~S~tK~l~G~g~~~gG~v~~ 219 (425)
T PRK06084 189 RP---F-EHG-ADIVVHSLTKYIGGHGTSIGGIVVD 219 (425)
T ss_pred Ch---h-hcC-CCEEEECchhcccccccceeEEEEe
Confidence 11 1 112 2388899999999999999998763
No 193
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.62 E-value=3e-14 Score=137.23 Aligned_cols=164 Identities=15% Similarity=0.128 Sum_probs=113.2
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH----HHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH----NIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~----~~~~~~G~~~~~ 170 (337)
..+|++.+|++. +.. + .+.+..|+.++.+++.++ . +||+|++++|.|+... ..++..|.+++.
T Consensus 56 ~~~le~~lA~l~-g~~------~---~v~~~sG~~ai~~~l~~l-~--~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~ 122 (390)
T PRK08064 56 REALEDIIAELE-GGT------K---GFAFASGMAAISTAFLLL-S--KGDHVLISEDVYGGTYRMITEVLSRFGIEHTF 122 (390)
T ss_pred HHHHHHHHHHHh-CCC------C---eEEECCHHHHHHHHHHHh-C--CCCEEEEccCccchHHHHHHHHHHHcCCEEEE
Confidence 457889999986 321 1 234566677887766533 3 8999999999998433 445668999888
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++. .|++.+++.+.+ +. .++++++|+||||.+.+ +++|.++|+++++++|+|++|...... .
T Consensus 123 v~~-------~d~~~l~~~l~~--~t-klV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---~-- 184 (390)
T PRK08064 123 VDM-------TNLEEVAQNIKP--NT-KLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ---K-- 184 (390)
T ss_pred ECC-------CCHHHHHHhcCC--Cc-eEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc---C--
Confidence 865 267888887752 33 44445899999999975 667888899999999999999765321 1
Q ss_pred HHHHHhhhcCCeEEEEeccccccc-ccccccceeEeeeCCHHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMG-LYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
++ ..+ ..+++.|+||.|+ -+|...|++++ .++++.+++.
T Consensus 185 -~~----~~g-~Divv~S~tK~~~G~~~~laG~~v~--~~~~~~~~l~ 224 (390)
T PRK08064 185 -PL----DLG-ADVVLHSATKFLAGHSDVLAGLAVV--KDEELAQKLY 224 (390)
T ss_pred -ch----hhC-CcEEEeecceeccCCccceeEEEEe--CCHHHHHHHH
Confidence 11 112 3477889999986 33455676654 4566655554
No 194
>PRK07505 hypothetical protein; Provisional
Probab=99.62 E-value=4.4e-14 Score=136.66 Aligned_cols=236 Identities=17% Similarity=0.032 Sum_probs=131.1
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCC------CCCCHHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLP------MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~------~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
...+|++...+. | ....|.|.+|+.+ +.......+.. .....++++.+++++ +. + .+.
T Consensus 46 ~~~ld~~s~~~l---g-l~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~-~~-------~---~~~ 110 (402)
T PRK07505 46 HTFVNFVSCSYL---G-LDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF-GA-------S---VLT 110 (402)
T ss_pred ceEEEeecCCcc---C-CCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh-CC-------C---EEE
Confidence 356888654322 1 1345667666554 32111011111 112345667777654 21 1 234
Q ss_pred eccchhHHHHHHHHHhh-hCC-CC-eEEEcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCe
Q 047180 124 SLSGTGACRLFADFQKR-FHP-DS-QIYIPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGS 197 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~-~~p-gd-~Vlv~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 197 (337)
.++|+++...++.++.. ..+ |+ .|++.+..|..-.. .....+.+++.+|. .|++.+++.+.. ..+
T Consensus 111 ~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~--~~~ 181 (402)
T PRK07505 111 FTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKT--NKT 181 (402)
T ss_pred ECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhc--CCC
Confidence 45566676666544332 112 32 47777766644211 11223456666654 378889887753 234
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh-cCCeEEEEeccccccccc
Q 047180 198 FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK-DGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 198 ~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~ 276 (337)
++++ ++|+||||.+++ +++|.++|+++++++|+||+|....++.... ......+.. ..+++++++||||.||++
T Consensus 182 ~~vl-~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~-~~~~~~~~~~~~d~~i~~~s~sK~~~~~ 256 (402)
T PRK07505 182 VAYV-ADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGE-GYVRSELDYRLNERTIIAASLGKAFGAS 256 (402)
T ss_pred EEEE-EecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCC-chHHHHcCCCCCCCeEEEEechhhhhcc
Confidence 4444 789999999998 5777888999999999999985433321111 111122222 346789999999999987
Q ss_pred ccccceeEeeeCCHHHHHHHHHHHHhhhc-cccc-CCChhHHHHHHHHhC
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKSQLQQLAR-PMYS-NPPVHGALIVSTILG 324 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~-~~~~-~~~~~~q~~~~~~l~ 324 (337)
| ||+++ .++++++.+.. ... .+++ +++.++..++...++
T Consensus 257 G---g~~~~--~~~~~~~~~~~----~~~~~t~~~~~~~~a~aa~~a~l~ 297 (402)
T PRK07505 257 G---GVIML--GDAEQIELILR----YAGPLAFSQSLNVAALGAILASAE 297 (402)
T ss_pred C---eEEEe--CCHHHHHHHHH----hCCCceeCCCCCHHHHHHHHHHHH
Confidence 6 88754 46666665543 111 1232 344456655555554
No 195
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=2.6e-14 Score=138.57 Aligned_cols=155 Identities=16% Similarity=0.105 Sum_probs=116.3
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----HHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----WRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~~~~G~~~~~ 170 (337)
...|-+.++++.-+.+ .+.+++|+.|+.+++..+.. |||+|+++.++|..-... ++..|+++..
T Consensus 63 v~~lE~~la~leg~~~----------av~~~SG~aAi~~al~all~--~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~ 130 (432)
T PRK06702 63 LAAFEQKLAELEGGVG----------AVATASGQAAIMLAVLNICS--SGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTF 130 (432)
T ss_pred HHHHHHHHHHHhCCCc----------EEEECCHHHHHHHHHHHhcC--CCCEEEECCCchHHHHHHHHHHHHHCCCEEEE
Confidence 4567888888763322 46799999999998876655 999999999999855444 6778998877
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
+. ..+|++.++++++. ++++|++ .+|+||||.+.+ +++|+++|+++|+++|+|++|..-. .
T Consensus 131 vd------~~~d~~~l~~~I~~--~Tk~I~~-e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~---~---- 191 (432)
T PRK06702 131 FN------PNLTADEIVALAND--KTKLVYA-ESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPY---L---- 191 (432)
T ss_pred EC------CCCCHHHHHHhCCc--CCeEEEE-EcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchh---h----
Confidence 63 24688999998863 4456665 689999999998 8888999999999999999984110 0
Q ss_pred HHHHHhhhcCCeEEEEecccc-----ccccccccc-----ceeE
Q 047180 251 KAIRIFLKDGHLLGLAQSYAK-----NMGLYGQRV-----GCLS 284 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK-----~~~~~G~Rv-----G~~~ 284 (337)
.+.+ +.+ --|+++|+|| +..++|.++ +|..
T Consensus 192 --~~pl-~~G-ADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~ 231 (432)
T PRK06702 192 --CQAF-EHG-ANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTN 231 (432)
T ss_pred --CChh-hcC-CCEEEEccccccCCCcceeceEEEeCCCccccc
Confidence 0111 111 1288999999 999999998 6654
No 196
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.61 E-value=6.1e-14 Score=134.48 Aligned_cols=164 Identities=15% Similarity=0.099 Sum_probs=110.8
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCc-chHH---HHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWS-NHHN---IWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~-~y~~---~~~~~G~~~~~ 170 (337)
..+|++.++++. +.. . .+.+..|+.++.+++.+ .. |||+|++++|+|+ .|.. .++..|++++.
T Consensus 52 ~~~Le~~lA~l~-g~~------~---~~~~~sG~aai~~~~~~-l~--~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~ 118 (377)
T PRK07671 52 RAALEELIAVLE-GGH------A---GFAFGSGMAAITAVMML-FS--SGDHVILTDDVYGGTYRVMTKVLNRFGIEHTF 118 (377)
T ss_pred HHHHHHHHHHHh-CCC------c---eEEeCCHHHHHHHHHHH-hC--CCCEEEECCCccchHHHHHHHHHhcCCeEEEE
Confidence 467888999875 321 1 23455567777765543 33 8999999999999 4543 33457888887
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++. .|++.+++++.. +.+++ ++++||||||.+.+ +++|+++|+++++++|+|++|.....+ .
T Consensus 119 v~~-------~d~~~l~~ai~~--~tklV-~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~---~-- 180 (377)
T PRK07671 119 VDT-------SNLEEVEEAIRP--NTKAI-YVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ---S-- 180 (377)
T ss_pred ECC-------CCHHHHHHhcCC--CCeEE-EEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC---C--
Confidence 753 378889888752 33444 44899999999864 677888899999999999999753221 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~ 297 (337)
++ ..+ .-+++.|+||.++-++ .-.|++++ .++++.+++.
T Consensus 181 -p~----~~g-~Divv~S~sK~l~G~~~~~~G~~v~--~~~~l~~~~~ 220 (377)
T PRK07671 181 -PI----SLG-ADIVLHSATKYLGGHSDVVAGLVVV--NSPELAEDLH 220 (377)
T ss_pred -hh----hhC-CeEEEecCcccccCCccceeEEEEe--CcHHHHHHHH
Confidence 11 112 2488899999998443 23455543 4666655554
No 197
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.61 E-value=7.3e-14 Score=134.15 Aligned_cols=196 Identities=13% Similarity=0.105 Sum_probs=131.1
Q ss_pred CCCCCCC--CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH---
Q 047180 87 MEYLPMG--GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW--- 161 (337)
Q Consensus 87 ~~Y~~~~--G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~--- 161 (337)
+.|+... +...|++++|++. +.. .++++.||++|+..++..+.+ |||+|++++|.|+.+...+
T Consensus 53 ~~Y~r~~npt~~~Le~~iA~le-~~~---------~~~~~~sG~~Ai~~~l~all~--~GD~Vvv~~~~Y~~t~~l~~~~ 120 (394)
T PRK09028 53 MFYGRRGTPTHFAFQAAIVELE-GGA---------GTALYPSGAAAISNALLSFLK--AGDHLLMVDSCYEPTRDLCDKI 120 (394)
T ss_pred ceecCCCCchHHHHHHHHHHHh-CCC---------cEEEECCHHHHHHHHHHHHhC--CCCEEEEECCCcHHHHHHHHHh
Confidence 4577642 3468999999885 221 146899999999988876655 9999999999998877543
Q ss_pred -HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC
Q 047180 162 -RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG 240 (337)
Q Consensus 162 -~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~ 240 (337)
+..|.++..++. -+.+.+++.+. ++.+ ++++++|+||||.+ .++++|+++|+++++++|+|++|..
T Consensus 121 l~~~Gi~v~~v~~-------~~~e~l~~~l~--~~Tk-lV~lespsNPtg~v---~dl~~I~~la~~~g~~lvvD~t~a~ 187 (394)
T PRK09028 121 LKGFGIETTYYDP-------MIGEGIRELIR--PNTK-VLFLESPGSITMEV---QDVPTLSRIAHEHDIVVMLDNTWAS 187 (394)
T ss_pred hhhcceEEEEECC-------CCHHHHHHhcC--cCce-EEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCccc
Confidence 456777665532 13467777764 2334 44458999999876 6789999999999999999999964
Q ss_pred CCCCCCccchHHHHHhhhcCCeEEEEecccccc-cccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHH
Q 047180 241 FASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIV 319 (337)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~ 319 (337)
-.. . . + + ..+ -=+++.|.+|.+ |-.+...|+++ .+++..+++... ....-.+.+.+....+
T Consensus 188 p~~--~-~---P---l-~~G-aDivv~S~tK~l~Gh~d~~~G~~~---~~~~~~~~l~~~----~~~~G~~~~p~~a~l~ 249 (394)
T PRK09028 188 PIN--S-R---P---F-EMG-VDISIQAATKYIVGHSDVMLGTAT---ANEKHWDQLREH----SYLMGQCTSPDDVYLA 249 (394)
T ss_pred ccc--C-C---c---c-ccC-ceEEEEeCCeEecCCCCEEEEEEE---CCHHHHHHHHHH----HHhcCCCCCHHHHHHH
Confidence 321 1 0 1 1 112 237789999999 55556778653 356555544432 1112234566666666
Q ss_pred HHHhCC
Q 047180 320 STILGD 325 (337)
Q Consensus 320 ~~~l~~ 325 (337)
.+-|+.
T Consensus 250 ~rgl~T 255 (394)
T PRK09028 250 MRGLRT 255 (394)
T ss_pred HcccCc
Confidence 655554
No 198
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.60 E-value=1.2e-13 Score=131.70 Aligned_cols=171 Identities=14% Similarity=0.104 Sum_probs=117.7
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch--HHHHHhcCceeeEeee
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH--HNIWRDAHVTQRTFHY 173 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y--~~~~~~~G~~~~~~~~ 173 (337)
.++|+.+++++ +-. ++...+++|.||++++..++..+.. +||.+++..+++... ...++..|.+++.+++
T Consensus 38 ~~~r~~la~l~-~~~-----~~~~~i~~t~~~t~al~~~~~~l~~--~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~ 109 (363)
T TIGR02326 38 EQIRQQLLALA-TAE-----EGYTSVLLQGSGTFAVEAVIGSAVP--KDGKLLVVINGAYGARIVQIAEYLGIPHHVVDT 109 (363)
T ss_pred HHHHHHHHHHh-CCC-----CCceEEEEcCCCHHHHHHHHHhcCC--CCCeEEEEeCChhhHHHHHHHHHcCCceEEEeC
Confidence 45677777765 321 2222367899999999999876655 788877777666554 3667889999999987
Q ss_pred ccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 174 YHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 174 ~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
. . ++.+|++.+++.+.+.++.+ ++.+++++||||..++ +++|+++|+++++++|+|.++. +.. . + +
T Consensus 110 ~-~-~~~~d~~~l~~~l~~~~~~~-~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~-~g~--~--~---~ 175 (363)
T TIGR02326 110 G-E-VEPPDVVEVEAILAADPAIT-HIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSS-FGG--I--P---I 175 (363)
T ss_pred C-C-CCCCCHHHHHHHHhhCCCcc-EEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEcccc-ccC--c--c---c
Confidence 3 2 56789999999887533223 3444778999999997 5789999999999999997653 321 1 0 1
Q ss_pred HHhhhcCCeEEEEecccccc-cccccccceeEeeeCCHHHHHH
Q 047180 254 RIFLKDGHLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~ 295 (337)
. +...+.+ +++.|++|.+ |.+| +||+++ +++.+++
T Consensus 176 ~-~~~~~~D-~~~~s~~K~l~~p~G--~G~l~~---~~~~~~~ 211 (363)
T TIGR02326 176 D-IAELHID-YLISSANKCIQGVPG--FGFVIA---RQAELAA 211 (363)
T ss_pred c-hhhcCcc-EEEecCccccccCCc--ceEEEE---CHHHHHH
Confidence 1 1122223 6678999987 6666 699986 3444443
No 199
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.60 E-value=7.1e-14 Score=134.75 Aligned_cols=180 Identities=11% Similarity=0.025 Sum_probs=115.3
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCcee
Q 047180 89 YLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQ 168 (337)
Q Consensus 89 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~ 168 (337)
|+...+..+|.+++|+++-.. +. ++.+.|.+... .++..+.+ |||.|+++++.|+.+...+...++++
T Consensus 39 yg~~~~~~~LE~~lA~~~g~e-------~a--l~~~sG~~a~~-~~i~~l~~--~GD~Vl~~~~~h~s~~~~~~l~~~~~ 106 (392)
T PLN03227 39 YGTIDAHLELEQCMAEFLGTE-------SA--ILYSDGASTTS-STVAAFAK--RGDLLVVDRGVNEALLVGVSLSRANV 106 (392)
T ss_pred cCChHHHHHHHHHHHHHhCCC-------cE--EEecCcHHHHH-HHHHHhCC--CCCEEEEeccccHHHHHHHHHcCCeE
Confidence 776678899999999987321 21 34444444444 44444555 99999999999999988888888877
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcC--------CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNA--------PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG 240 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~--------~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~ 240 (337)
+.++..+ .-|++.+.+.+... .+++.+|+..+++||+|.+.+ +++|.++|+++|+++|.||+|.
T Consensus 107 ~~~~~~d----~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~- 178 (392)
T PLN03227 107 RWFRHND----MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGTLAP---LKELVALKEEFHYRLILDESFS- 178 (392)
T ss_pred EEeCCCC----HHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCcccC---HHHHHHHHHHcCCEEEEECccc-
Confidence 7665311 11334444344311 123455556889999999999 6688999999999999999996
Q ss_pred CC-CCCCccchHHHHHh--hhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 241 FA-SGDPERDAKAIRIF--LKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 241 ~~-~~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+. .+ .........+ .+....-+++.|+||.+| ++.|++++ +.++++.+
T Consensus 179 ~g~~g--~~G~g~~~~~g~~p~~~~Div~~slsk~~g---~~gg~v~~---~~~~~~~~ 229 (392)
T PLN03227 179 FGTLG--KSGRGSLEHAGLKPMVHAEIVTFSLENAFG---SVGGMTVG---SEEVVDHQ 229 (392)
T ss_pred ccccC--CCCCcHHHHcCCCCCCCceEEEeechhhhh---ccCcEEec---CHHHHHHH
Confidence 43 11 1111111111 011123577788999765 66788764 45544433
No 200
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.60 E-value=1.6e-13 Score=133.15 Aligned_cols=186 Identities=12% Similarity=0.025 Sum_probs=131.6
Q ss_pred EEeeccchh-HHHHHHHHHhhhC-CCCeEEEcCCCCcchHHHHHhcCceeeEeee-ccCCCCCCChHHHHHHHHcCCCCe
Q 047180 121 AVQSLSGTG-ACRLFADFQKRFH-PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY-YHPGTKGLDFAALMDDIKNAPNGS 197 (337)
Q Consensus 121 ~~~t~g~~~-al~~~~~~l~~~~-pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~~~~ 197 (337)
.+.++|+++ ++.+++.++.... +||+|+++.=++.....++..+|++++.++. .+++++.+|++.+++++++...+.
T Consensus 126 a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~ka 205 (444)
T TIGR03531 126 AFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDN 205 (444)
T ss_pred EEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCC
Confidence 467888884 7777766654322 5899999999999889999999999999985 245579999999999997532133
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh----cCCeEEEEecccccc
Q 047180 198 FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK----DGHLLGLAQSYAKNM 273 (337)
Q Consensus 198 ~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~----~~~~~i~~~S~SK~~ 273 (337)
+++++++|+ ||.+...+++++|+++|++|++++|+|++|..... ....+.. .+.-.+++.|++|.+
T Consensus 206 i~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~--------~~~~~~~~g~~~Grad~vv~s~hK~l 275 (444)
T TIGR03531 206 ILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSN--------KYMELINKAIKVGRVDAVVSSTDKNF 275 (444)
T ss_pred EEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcCh--------hhhhhhhccccccCCCeEEEeCccCC
Confidence 444445565 78778889999999999999999999999985321 0111111 111145577999999
Q ss_pred cccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 274 GLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 274 ~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
.++|+ |++++ +.++++++++.. ... ....+...|.+...++.-
T Consensus 276 ~~pg~--Gg~I~-~~d~el~~~i~~----~y~--g~~~~s~~~~~~~~ll~~ 318 (444)
T TIGR03531 276 MVPVG--GAIIY-SFDENFIQEISK----SYP--GRASASPSLDVLITLLSL 318 (444)
T ss_pred CCCCC--EEEEE-ECCHHHHHHHHH----hcc--CCCCChHHHHHHHHHHHh
Confidence 99998 77764 367777665543 111 112345678887777763
No 201
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.60 E-value=5.3e-14 Score=134.55 Aligned_cols=165 Identities=15% Similarity=0.010 Sum_probs=116.1
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCcee
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQ 168 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~ 168 (337)
.+..++|+.+++++ +.. +.++ +++|.|+++++.+++..+.+ +||+|+++.+.|+.+.. ..+..|.++
T Consensus 44 ~~~~~~~~~la~~~-~~~----~~~~--v~~~~g~t~al~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~ 114 (376)
T TIGR01977 44 REVEETRQLLAKLF-NAP----SSAH--VVFTNNATTALNIALKGLLK--EGDHVITTPMEHNSVARPLECLKEQIGVEI 114 (376)
T ss_pred HHHHHHHHHHHHHh-CcC----CCCe--EEEeCCHHHHHHHHHHhccC--CCCEEEECcchhhHHHHHHHHHHHHcCcEE
Confidence 45678999999987 321 1223 57889999999988876555 89999999999988653 345569999
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
+.++.. . ++.+|++.+++.+.+ +.++ +++++||||||.+++. ++|.++|+++++++|+|+++.--... ++
T Consensus 115 ~~v~~~-~-~~~~d~~~l~~~~~~--~~~~-v~~~~~~n~tG~~~~~---~~i~~l~~~~~~~livD~a~~~g~~~-~~- 184 (376)
T TIGR01977 115 TIVKCD-N-EGLISPERIKRAIKT--NTKL-IVVSHASNVTGTILPI---EEIGELAQENGIFFILDAAQTAGVIP-ID- 184 (376)
T ss_pred EEEecC-C-CCCcCHHHHHHhcCC--CCeE-EEEECCCCCccccCCH---HHHHHHHHHcCCEEEEEhhhccCccC-CC-
Confidence 988873 2 467899999998853 3334 4458999999999985 56788899999999999998522110 11
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+...+. -+++.|+.|.++.|. .+|.+++
T Consensus 185 -------~~~~~~-D~~~~s~~K~l~~p~-g~g~l~~ 212 (376)
T TIGR01977 185 -------MTELAI-DMLAFTGHKGLLGPQ-GTGGLYI 212 (376)
T ss_pred -------chhcCC-CEEEecccccccCCC-CceEEEE
Confidence 111121 255678889876432 3577665
No 202
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.60 E-value=1.3e-13 Score=132.37 Aligned_cols=176 Identities=16% Similarity=0.060 Sum_probs=123.1
Q ss_pred CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEe
Q 047180 92 MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTF 171 (337)
Q Consensus 92 ~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~ 171 (337)
..+..+|++++++|+..++ .+.+++|++|+.+++..+. ..|||+|++++|+|+.+...++..|++++.+
T Consensus 28 g~~~~~le~~la~~~g~~~----------~v~~~sgt~al~~~l~al~-~~~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~ 96 (380)
T TIGR03588 28 GPTVPAFEEALAEYVGAKY----------AVAFNSATSALHIACLALG-VGPGDRVWTTPITFVATANCALYCGAKVDFV 96 (380)
T ss_pred ChhHHHHHHHHHHHHCCCe----------EEEEcCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHHHHHHHHcCCEEEEE
Confidence 3457899999999873321 2456788999999987762 2389999999999999999999999999999
Q ss_pred eeccCCCCCCChHHHHHHHHcC--CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 172 HYYHPGTKGLDFAALMDDIKNA--PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~l~~~--~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
++ +++++.+|++++++.+++. ++.++++ +.||+|...+ +++|+++|++++++||+|+++..... ++.
T Consensus 97 ~~-~~~~~~~d~~~l~~~i~~~~~~~t~~v~----~~~~~G~~~~---~~~i~~l~~~~~~~lI~D~a~a~g~~--~~~- 165 (380)
T TIGR03588 97 DI-DPDTGNIDEDALEKKLAAAKGKLPKAIV----PVDFAGKSVD---MQAIAALAKKHGLKIIEDASHALGAE--YGG- 165 (380)
T ss_pred ec-CCCcCCcCHHHHHHHhhcccCCCceEEE----EeCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccCc--cCC-
Confidence 98 3446789999999988632 2233333 2568998764 77888999999999999999864321 111
Q ss_pred hHHHHHhhhcCCeEEEEecc--cccccccccccceeEeeeCCHHHHHHHH
Q 047180 250 AKAIRIFLKDGHLLGLAQSY--AKNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
..+..+ ..++ +.+.|| +|.++. | .-|+++. .+++..++++
T Consensus 166 -~~~g~~-~~~d--~~~~S~~~~K~~~~-~-~GG~v~~--~~~~~~~~~~ 207 (380)
T TIGR03588 166 -KPVGNC-RYAD--ATVFSFHPVKIITT-A-EGGAVTT--NDEELAERMR 207 (380)
T ss_pred -EeCCCc-cccc--eEEEecCCCCcccc-c-CceEEEE--CCHHHHHHHH
Confidence 011110 1122 444455 588875 4 4666654 6777766654
No 203
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.60 E-value=1.4e-13 Score=132.05 Aligned_cols=171 Identities=17% Similarity=0.134 Sum_probs=118.1
Q ss_pred CCCCCCCCC---HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH---
Q 047180 87 MEYLPMGGS---VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI--- 160 (337)
Q Consensus 87 ~~Y~~~~G~---~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~--- 160 (337)
+.|... |. .+|.+.+++++ +. +. .+.+++|+.++.+++.++ . +||+|++++|.|+.+...
T Consensus 39 ~~Y~r~-~~p~~~~le~~la~l~-g~-------~~--~l~~~sG~~al~~~l~ll-~--~Gd~Vl~~~~~y~~~~~~~~~ 104 (378)
T TIGR01329 39 YDYTRS-GNPTRTALESLLAKLD-KA-------DR--AFAFSSGMAALDVITRLL-N--NGDEIIAGDDLYGGTDRLLTQ 104 (378)
T ss_pred CccCCC-CChHHHHHHHHHHHHh-CC-------Cc--EEEECCHHHHHHHHHHHh-C--CCCEEEEcCCCchHHHHHHHH
Confidence 557654 43 45667777764 21 12 356777788888776643 4 899999999999987653
Q ss_pred -HHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC
Q 047180 161 -WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 161 -~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
++..|++++.++. .|++.++++++ ++ +.++++++|+||||.+.+ +++|+++|+++++++|+|++|.
T Consensus 105 ~~~~~G~~v~~vd~-------~d~~~le~~i~--~~-tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~ 171 (378)
T TIGR01329 105 VVPRSGVVVVHVDT-------TDLDKVKAALG--PK-TKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMM 171 (378)
T ss_pred HHHHcCcEEEEeCC-------CCHHHHHHhcC--cC-ceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCc
Confidence 4557999888764 27888988875 23 344445899999999986 7889999999999999999974
Q ss_pred CCCCCCCccchHHHHHhhhcCCeEEEEecccccccc-cccccceeEeeeCCHHHHHHHH
Q 047180 240 GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL-YGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
.-.. . .++ ..+. -+++.|++|.++- .|.+.|++++ .++...+++.
T Consensus 172 ~~~~----~--~~l----~~g~-Di~v~S~tK~l~G~~~~~~G~v~~--~~~~~~~~~~ 217 (378)
T TIGR01329 172 SPLL----C--NPL----ELGA-DIVYHSATKFLAGHSDVMAGVLAV--KGEEIAKKVY 217 (378)
T ss_pred cccc----C--Chh----hcCC-cEEEEecceeccCCccceeEEEEe--CcHHHHHHHH
Confidence 2211 0 111 1122 3778899998863 3578999875 4555444443
No 204
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.59 E-value=4.3e-14 Score=135.58 Aligned_cols=174 Identities=16% Similarity=0.114 Sum_probs=119.1
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY 174 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~ 174 (337)
...+++++.+++....+ .++ ++.|+||+.|+.+++..+. ..|||+|+++.|+|+.+...++..|++++.+++
T Consensus 29 ~~~~~~~~e~~la~~~g----~~~--~v~~~sgt~al~~~l~~~~-~~~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~- 100 (375)
T PRK11706 29 DGGFTRRCQQWLEQRFG----SAK--VLLTPSCTAALEMAALLLD-IQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDI- 100 (375)
T ss_pred CCHHHHHHHHHHHHHhC----CCe--EEEECCHHHHHHHHHHHhC-CCCCCEEEECCCCcHHHHHHHHHcCCEEEEEec-
Confidence 34566666665533322 123 5789999999988776542 238999999999999999999999999999987
Q ss_pred cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHH
Q 047180 175 HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIR 254 (337)
Q Consensus 175 ~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 254 (337)
+++++.+|++++++.++. +.+++++ .||||...+ +++|+++|++++++||+|++|..... +.. .++.
T Consensus 101 d~~~~~~d~~~le~~i~~--~tk~i~~----~~~~G~~~~---~~~i~~la~~~~i~vIeD~a~a~g~~--~~~--~~~g 167 (375)
T PRK11706 101 RPDTMNIDETLIEAAITP--KTRAIVP----VHYAGVACE---MDTIMALAKKHNLFVVEDAAQGVMST--YKG--RALG 167 (375)
T ss_pred CCCcCCcCHHHHHHhcCC--CCeEEEE----eCCCCCccC---HHHHHHHHHHcCCEEEEECccccccc--cCC--eeee
Confidence 444678999999998863 3344443 357998754 66888999999999999999976542 111 0111
Q ss_pred HhhhcCCeEEEEecc--cccccccccccceeEeeeCCHHHHHHHHH
Q 047180 255 IFLKDGHLLGLAQSY--AKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 255 ~~~~~~~~~i~~~S~--SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
.+ ++ +.+.|| +|.++ +|.+.++++ .++++.++++.
T Consensus 168 ~~---~~--~~~~Sf~~~K~l~-~g~gG~~~~---~~~~~~~~~~~ 204 (375)
T PRK11706 168 TI---GH--IGCFSFHETKNYT-AGEGGALLI---NDPALIERAEI 204 (375)
T ss_pred cC---cC--EEEEeCCCCcccc-ccCCeEEEE---CCHHHHHHHHH
Confidence 11 11 222333 39998 598866654 46776665543
No 205
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.58 E-value=1.7e-13 Score=130.70 Aligned_cols=192 Identities=14% Similarity=0.090 Sum_probs=125.3
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
....+|.+++|++.-+ + .++.++||++|+.+++.++ . |||+|+++.+.|..-...+.....+. .+.
T Consensus 54 p~~~~le~~lA~leg~--------~--~~v~~~sG~aAi~~~l~~l-~--~GD~VI~~~~~yg~~~~~~~~~~~~~-~~~ 119 (364)
T PRK07269 54 PTRAKLEETLAAIESA--------D--YALATSSGMSAIVLAFSVF-P--VGSKVVAVRDLYGGSFRWFNQQEKEG-RFH 119 (364)
T ss_pred ccHHHHHHHHHHHhCC--------C--eEEEeCCHHHHHHHHHHHh-C--CCCEEEEecCCcCchHHHHHHHHhcC-cEE
Confidence 4567899999998622 1 2578999999999888544 4 89999999999976554333221110 111
Q ss_pred eccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHH
Q 047180 173 YYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKA 252 (337)
Q Consensus 173 ~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~ 252 (337)
. .+..|++.++++++. +.+ +|++++|+||||.+. ++++|+++|+++++++|+|++|..-... .+
T Consensus 120 ~----~~~~d~~~l~~~i~~--~Tk-lV~lesP~NPtg~~~---di~~I~~la~~~gi~vvvD~t~~~~~~~------~p 183 (364)
T PRK07269 120 F----TYANTEEELIAAIEE--DTD-IVYIETPTNPLMVEF---DIEKVAKLAHAKGAKVIVDNTFYSPIYQ------RP 183 (364)
T ss_pred E----EecCCHHHHHHhcCc--Cce-EEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC------Cc
Confidence 1 244688999888853 334 454589999999887 6788889999999999999997432111 11
Q ss_pred HHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 253 IRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 253 ~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+. .+- -+++.|++|.++-+|- =-|+++. .++++.++++.. .. ..-.+.+.+...++..-|+.
T Consensus 184 l~----~ga-Divv~S~tK~l~g~~d~~gG~v~~--~~~~l~~~~~~~-~~---~~G~~~s~~~a~l~~~~L~t 246 (364)
T PRK07269 184 IE----LGA-DIVLHSATKYLSGHNDVLAGVVVT--NDLELYEKLFYN-LN---TTGAVLSPFDSYLLMRGLKT 246 (364)
T ss_pred hh----hCC-cEEEecCceeccCCCcccceEEEe--CcHHHHHHHHHH-HH---HhCCCCCHHHHHHHHcCCCc
Confidence 21 121 2778899999974443 2466553 566666665431 11 11224566677777666765
No 206
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.58 E-value=1.5e-13 Score=133.51 Aligned_cols=154 Identities=15% Similarity=0.114 Sum_probs=102.9
Q ss_pred eeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-----HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCe
Q 047180 123 QSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-----IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGS 197 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-----~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 197 (337)
.+++|+.++..++..+.. |||+|+++.|+|+.+.. .+...|++++.+++. .+++.+|++++++.+++. +.+
T Consensus 92 ~~~sgt~al~~~l~~l~~--~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~~-~~k 167 (416)
T PRK00011 92 QPHSGSQANAAVYFALLK--PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVD-EETGLIDYDEVEKLALEH-KPK 167 (416)
T ss_pred ecCCchHHHHHHHHHhcC--CCCEEEEeccccCCccccccccccccceeeEeecCcC-cccCCcCHHHHHHHHHhc-CCC
Confidence 334567888888777655 99999999999987532 123446788888763 335789999999988642 234
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 198 FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 198 ~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
++++ ++++|| .. ..+++|+++|+++|+++|+|++|. ++..... . + ..+ . . --+++.||||++ +
T Consensus 168 ~v~~-~~~~~~--~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~-~---~-~~~-~-~-~di~~~S~~K~l--~ 231 (416)
T PRK00011 168 LIIA-GASAYS--RP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGV-H---P-SPV-P-H-ADVVTTTTHKTL--R 231 (416)
T ss_pred EEEE-CCCcCC--Cc---cCHHHHHHHHHHcCCEEEEECcchhcccccCc-c---C-CCC-C-C-CcEEEecCCcCC--C
Confidence 4444 555555 33 347889999999999999999974 3321100 0 0 001 1 1 136689999976 6
Q ss_pred ccccceeEeeeCCHHHHHHHHH
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
|+|.||+++ .+++..+++..
T Consensus 232 g~~gg~i~~--~~~~~~~~l~~ 251 (416)
T PRK00011 232 GPRGGLILT--NDEELAKKINS 251 (416)
T ss_pred CCCceEEEe--CCHHHHHHHHH
Confidence 999999986 45666555543
No 207
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.58 E-value=3.4e-13 Score=130.63 Aligned_cols=196 Identities=17% Similarity=0.136 Sum_probs=122.1
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY 174 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~ 174 (337)
..+|.+.+++++ +. +. .++.++|..+...++..+....+||.|++....++.....++..|.+++.++.
T Consensus 92 ~~~le~~la~~~-g~-------~~--~~~~~SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~- 160 (406)
T PRK13393 92 HVLLEAELADLH-GK-------EA--ALLFTSGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH- 160 (406)
T ss_pred HHHHHHHHHHHh-CC-------Cc--EEEeCCcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-
Confidence 356777888875 21 11 34555666677777765554336787777777777777777888887766543
Q ss_pred cCCCCCCChHHHHHHHHcC-CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHH
Q 047180 175 HPGTKGLDFAALMDDIKNA-PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKA 252 (337)
Q Consensus 175 ~~~~~~~d~~~l~~~l~~~-~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~ 252 (337)
.|++.+++.+... +.+..++++++++||||.+.+ +++|.++|+++++++|+||+|. ++ ++..-...
T Consensus 161 ------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~-~g~~G~g~-- 228 (406)
T PRK13393 161 ------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGL-YGPRGGGI-- 228 (406)
T ss_pred ------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccc-cCCCCCch--
Confidence 2567777766532 223455556899999999998 7778889999999999999997 33 22111111
Q ss_pred HHHhhhcCC-eEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcc-cc-cCCChhHHHHHHHHhC
Q 047180 253 IRIFLKDGH-LLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARP-MY-SNPPVHGALIVSTILG 324 (337)
Q Consensus 253 ~~~~~~~~~-~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~~~~q~~~~~~l~ 324 (337)
.. .....+ ..++++||||.||++| ||+++ ++++++.+.. ..+. .+ .+.+...+.++..+|+
T Consensus 229 ~~-~~~~~~~~~i~~~tlsKa~g~~G---G~~~~---~~~~~~~l~~----~~~~~~~t~~~~p~~~aa~~aaL~ 292 (406)
T PRK13393 229 AE-REGLADRLTIIEGTLAKAFGVMG---GYITG---SAALCDFIRS----FASGFIFTTSLPPAVAAGALASVR 292 (406)
T ss_pred hh-hcCCCCCCeEEEEeCchhhcccC---ceeeC---CHHHHHHHHH----hCcCceecCccCHHHHHHHHHHHH
Confidence 11 111112 3567799999999988 88864 5555554432 2221 12 2334445555555554
No 208
>PLN02509 cystathionine beta-lyase
Probab=99.57 E-value=2.9e-13 Score=132.42 Aligned_cols=173 Identities=16% Similarity=0.157 Sum_probs=116.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----H
Q 047180 86 NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----W 161 (337)
Q Consensus 86 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~ 161 (337)
.+.|... |.+ .++++.+++....+ .+. .+.+++|..++.+++.+ .. +||+|++++|.|+.+... +
T Consensus 124 ~~~Y~r~-gnp-t~~aLE~~lA~leg----~e~--ai~~~SG~aAi~~il~l-l~--~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 124 PYDYTRS-GNP-TRDALESLLAKLDK----ADR--AFCFTSGMAALSAVTHL-IK--NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred CCccCCC-CCH-HHHHHHHHHHHHhC----CCE--EEEeCcHHHHHHHHHHH-hC--CCCEEEEcCCchhhHHHHHHHHH
Confidence 4568765 766 57777776644321 122 35678888888766543 33 899999999999998743 4
Q ss_pred HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 162 RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 162 ~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
...|++++.++. .|++.+++++. ++.++ +++++|+||||.+ .++++|+++|+++|+++|+|++|..-
T Consensus 193 ~~~G~~v~~vd~-------~d~e~l~~ai~--~~Tkl-V~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~ 259 (464)
T PLN02509 193 PRSGVVVKRVNT-------TNLDEVAAAIG--PQTKL-VWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSP 259 (464)
T ss_pred HHCCeEEEEeCC-------CCHHHHHHhCC--cCCeE-EEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCcccc
Confidence 567888877643 36788888775 23344 4458999999986 77999999999999999999998533
Q ss_pred CCCCCccchHHHHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHH
Q 047180 242 ASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~ 295 (337)
..+ . +. ..+ --+++.|++|.++-+|- =.|++++ .++...++
T Consensus 260 ~~~---~---pl----~~g-aDivv~S~tK~l~G~gdv~gG~v~~--~~~~l~~~ 301 (464)
T PLN02509 260 VLS---R---PL----ELG-ADIVMHSATKFIAGHSDVMAGVLAV--KGEKLAKE 301 (464)
T ss_pred ccC---C---hh----hcC-CcEEEecCcccccCCCccceeEEEe--ccHHHHHH
Confidence 211 1 11 112 23778899999875443 3566553 34444333
No 209
>PRK05968 hypothetical protein; Provisional
Probab=99.57 E-value=2.9e-13 Score=130.41 Aligned_cols=188 Identities=15% Similarity=0.102 Sum_probs=127.3
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc----hHHHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSN----HHNIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~----y~~~~~~~G~~~~~ 170 (337)
..+|++.++++. +.. . .+.+++|+.|+.+++..+.. |||+|+++.|.|+. +...++..|.+++.
T Consensus 65 ~~~le~~lA~l~-g~~------~---av~~~sG~~Ai~~al~al~~--~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (389)
T PRK05968 65 VRAFEEMLAKLE-GAE------D---ARGFASGMAAISSTVLSFVE--PGDRIVAVRHVYPDAFRLFETILKRMGVEVDY 132 (389)
T ss_pred HHHHHHHHHHHh-CCC------c---EEEECCHHHHHHHHHHHHhC--CCCEEEEeCCCchHHHHHHHHHHHHcCceEEE
Confidence 457999999976 321 1 24567778898887766555 99999999999986 33566678988887
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++. .|++.+++.+. +.+++++ + ||||.+++..++++|+++|+++++++|+|++|...... .
T Consensus 133 vd~-------~d~~~l~~~i~---~tklV~i-e---~pt~~~~~~~dl~~i~~la~~~gi~vivD~a~a~~~~~---~-- 193 (389)
T PRK05968 133 VDG-------RDEEAVAKALP---GAKLLYL-E---SPTSWVFELQDVAALAALAKRHGVVTMIDNSWASPVFQ---R-- 193 (389)
T ss_pred eCC-------CCHHHHHHhcc---cCCEEEE-E---CCCCCCCcHHHHHHHHHHHHHcCCEEEEECCCcchhcc---C--
Confidence 743 27888887762 3345555 4 56666677799999999999999999999999765421 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++. .+. -+++.|+||.++.+| .+.|+++. +++.+++++...... ...+.+.+.+.++...|+.
T Consensus 194 -p~~----~g~-Divv~S~tK~l~g~~~~~gG~i~~---~~~~~~~l~~~~~~~---~g~~~~~~~A~~~l~~L~t 257 (389)
T PRK05968 194 -PIT----LGV-DLVIHSASKYLGGHSDTVAGVVAG---SKEHIARINAEAYPY---LGAKLSPFEAWLLLRGLRT 257 (389)
T ss_pred -chh----cCC-cEEEeeccccccCCCCeEEEEEEE---CHHHHHHHHHHHHHh---CCCCCChHHHHHHHcccCc
Confidence 111 122 367789999998765 57888764 566666555321111 1123455666666666664
No 210
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.56 E-value=3.2e-13 Score=131.85 Aligned_cols=170 Identities=11% Similarity=0.058 Sum_probs=118.9
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh-------hhCCCCeEEEcCCCCcchHHHHHhcCce
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK-------RFHPDSQIYIPVPTWSNHHNIWRDAHVT 167 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~-------~~~pgd~Vlv~~P~y~~y~~~~~~~G~~ 167 (337)
..+|++++++++ +. +. ++.|++|++++.+++..+. ...|||+|+++.|+|+.+...+...|++
T Consensus 65 ~~~fe~~lA~~~-g~-------~~--~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~ 134 (438)
T PRK15407 65 NDAFEKKLAEFL-GV-------RY--ALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLV 134 (438)
T ss_pred HHHHHHHHHHHh-CC-------Ce--EEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCE
Confidence 478999999987 32 11 4678889999988886653 2348999999999999999999999999
Q ss_pred eeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCc
Q 047180 168 QRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPE 247 (337)
Q Consensus 168 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~ 247 (337)
++.+++. ..++.+|++.+++.+.. +.+++++.+ |+|.. .++++|.++|++++++||+|+++.--.. +.
T Consensus 135 pv~vdvd-~~~~~id~~~le~~i~~--~tkaVi~~~----~~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~--~~ 202 (438)
T PRK15407 135 PVFVDVE-LPTYNIDASLLEAAVSP--KTKAIMIAH----TLGNP---FDLAAVKAFCDKHNLWLIEDNCDALGST--YD 202 (438)
T ss_pred EEEEecC-CCcCCcCHHHHHHHcCc--CCeEEEEeC----CCCCh---hhHHHHHHHHHHCCCEEEEECccchhhh--cC
Confidence 9999873 34688999999998853 344555533 45543 3678999999999999999998853321 10
Q ss_pred cchHHHHHhhhcCCeEEEEecc--cccccccccccceeEeeeCCHHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSY--AKNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
+ ..+- ..++ +.+.|| +|.+. .|. -|+++. .++++.++++
T Consensus 203 -g-~~~G---~~gd--~~~fSf~~~k~~~-~ge-GG~l~t--~d~~l~~~~~ 243 (438)
T PRK15407 203 -G-RMTG---TFGD--IATLSFYPAHHIT-MGE-GGAVFT--NDPLLKKIIE 243 (438)
T ss_pred -C-eeee---ccCc--eEEEeCCCCCCcc-ccC-ceEEEE--CCHHHHHHHH
Confidence 1 0011 1122 334455 57775 365 488765 6777666544
No 211
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.56 E-value=3.8e-13 Score=128.29 Aligned_cols=178 Identities=20% Similarity=0.109 Sum_probs=120.0
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh--CCCCeEEEcCCCCcchHHHHHhcCceeeEeee
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF--HPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~--~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~ 173 (337)
.++++.+++++ +.. ++. ++.++||++++..++..+... .++|+|++.++.++.+...++..|.+++.+|.
T Consensus 62 ~~~~~~la~~~-g~~-----~~~--~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~ 133 (371)
T PRK13520 62 EEAVEMLGELL-HLP-----DAY--GYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFDKAADMLGVELRRAPL 133 (371)
T ss_pred HHHHHHHHHHh-CCC-----CCC--eEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHHHHHHHcCceEEEecC
Confidence 34666677664 321 222 467899999988887665432 25799999999999999999999999999987
Q ss_pred ccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 174 YHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 174 ~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
. . ++.+|++.+++.+.+ ....+++ +.++||||.+.+ +++|.++|+++|++++.|++|..+..+ +.......
T Consensus 134 ~-~-~~~~d~~~l~~~i~~--~~~~vi~-~~~~~~tG~~~~---l~~I~~l~~~~g~~livD~a~~~~~~~-~~~~~~~~ 204 (371)
T PRK13520 134 D-D-DYRVDVKAVEDLIDD--NTIGIVG-IAGTTELGQVDP---IPELSKIALENGIFLHVDAAFGGFVIP-FLDDPPNF 204 (371)
T ss_pred C-C-CCcCCHHHHHHHHhh--CCEEEEE-EcCCcCCcccCC---HHHHHHHHHHcCCCEEEEecchhHHHH-hhcCCCCc
Confidence 3 2 467899999999864 2334443 567899999987 777888899999999999999865421 00000000
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHH
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~ 295 (337)
. +...+.+. +..|..| |+++|.++|++++ .+++.++.
T Consensus 205 ~-~~~~~vd~-~~~s~~K-~~~a~~~~G~~~~--~~~~~~~~ 241 (371)
T PRK13520 205 D-FSLPGVDS-ITIDPHK-MGLAPIPAGGILF--RDESYLDA 241 (371)
T ss_pred c-ccCCCCce-EEECCcc-ccCccCCceEEEE--cCHHHHHh
Confidence 0 00011122 2235567 6678899998876 35544443
No 212
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.56 E-value=1.2e-13 Score=131.29 Aligned_cols=163 Identities=16% Similarity=0.100 Sum_probs=113.3
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh--CCC-CeEEEcCCCCcchH---HHHHhcCcee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF--HPD-SQIYIPVPTWSNHH---NIWRDAHVTQ 168 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~--~pg-d~Vlv~~P~y~~y~---~~~~~~G~~~ 168 (337)
..++|+.+++++ +. ++++ +++|.|+++++.+++..+... .+| +.|++..-.++.+. ..++..|.++
T Consensus 44 ~~~~r~~la~~~-g~-----~~~~--v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v 115 (353)
T TIGR03235 44 VERARKQVAEAL-GA-----DTEE--VIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRALERNGFTV 115 (353)
T ss_pred HHHHHHHHHHHh-CC-----CCCe--EEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHHHHhcCCEE
Confidence 356788888876 32 2333 578999999998888766431 256 78888876666543 4456679999
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
+.+++. + ++.+|++.+++.+.+ + +.++++++|+||||.+++ +++|+++|+++++++++|+++.--.. .++
T Consensus 116 ~~v~~~-~-~~~~d~~~l~~~l~~--~-~~lv~~~~~~n~tG~~~~---~~~I~~l~~~~~~~~ivD~a~~~g~~-~~~- 185 (353)
T TIGR03235 116 TYLPVD-E-SGRIDVDELADAIRP--D-TLLVSIMHVNNETGSIQP---IREIAEVLEAHEAFFHVDAAQVVGKI-TVD- 185 (353)
T ss_pred EEEccC-C-CCcCCHHHHHHhCCC--C-CEEEEEEcccCCceeccC---HHHHHHHHHHcCCEEEEEchhhcCCc-ccc-
Confidence 999873 2 467899999988852 3 344545899999999987 57888899999999999998542110 011
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+...+.+ +++.|+.|.+|.+| +|++++
T Consensus 186 -------~~~~~~D-~~~~s~~K~~gp~g--~g~l~~ 212 (353)
T TIGR03235 186 -------LSADRID-LISCSGHKIYGPKG--IGALVI 212 (353)
T ss_pred -------ccccCCC-EEEeehhhcCCCCc--eEEEEE
Confidence 1111223 44457789988767 799886
No 213
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.55 E-value=5.2e-13 Score=129.40 Aligned_cols=184 Identities=11% Similarity=0.030 Sum_probs=116.2
Q ss_pred EEeeccchhHHHHHHHHHhhhC------CCCeEEEcCCCCcchHHHHHh-cCceeeE---eeeccC-C-CCCCChHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFH------PDSQIYIPVPTWSNHHNIWRD-AHVTQRT---FHYYHP-G-TKGLDFAALMD 188 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~------pgd~Vlv~~P~y~~y~~~~~~-~G~~~~~---~~~~~~-~-~~~~d~~~l~~ 188 (337)
++.+++|++|...++.+..... +..+|+..+.+|......... .|..... .|+... . ....|++.+++
T Consensus 99 v~~~~sGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 178 (406)
T PRK12381 99 VFFCNSGAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASA 178 (406)
T ss_pred EEEcCCcHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHH
Confidence 5789999999999987754331 347899999999998654333 3321100 011000 0 01236788888
Q ss_pred HHHcCCCCeEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEE
Q 047180 189 DIKNAPNGSFFLLHACAHNPTGVDP--SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLA 266 (337)
Q Consensus 189 ~l~~~~~~~~ili~~~p~NPTG~~~--s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (337)
.+.. +...+++ .|.||+|-++ +.+.+++|.++|++||+++|+||+|.+|... . .......+ ...++ +
T Consensus 179 ~l~~---~~aavii-EPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~-G--~~~~~~~~-~v~pD---i 247 (406)
T PRK12381 179 LIDD---QTCAVIV-EPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRT-G--ELYAYMHY-GVTPD---V 247 (406)
T ss_pred hccC---CeeEEEE-eCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCC-c--chhhhHhh-CCCCC---E
Confidence 7752 3334443 5899999876 7999999999999999999999999888431 1 11111111 11123 3
Q ss_pred ecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHh
Q 047180 267 QSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTIL 323 (337)
Q Consensus 267 ~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l 323 (337)
.||||.++ +|+|+||+++ ++++.+. +.........+.+.+.|.++..+|
T Consensus 248 ~t~sK~l~-gG~~ig~~~~---~~~~~~~----~~~~~~~~t~~~~pl~~aaa~a~l 296 (406)
T PRK12381 248 LTTAKALG-GGFPIGAMLT---TEKCASV----MTVGTHGTTYGGNPLASAVAGKVL 296 (406)
T ss_pred EEehhhhh-CCCceEEEEE---cHHHHhh----cCCCCCCCCCCCCHHHHHHHHHHH
Confidence 58999999 8999999986 3444433 332222222245667787777744
No 214
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.55 E-value=3.7e-13 Score=129.14 Aligned_cols=165 Identities=15% Similarity=0.114 Sum_probs=111.6
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH----HHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH----NIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~----~~~~~~G~~~~~ 170 (337)
...|.+.++++.-.. . .+.+..|+.|+.+++.++ . |||+|++++|.|+... ..++..|.+++.
T Consensus 52 ~~~Le~~la~l~g~~-------~---al~~~SG~~Al~~~l~~l-~--pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~ 118 (380)
T PRK06176 52 RFALEELIADLEGGV-------K---GFAFASGLAGIHAVFSLF-Q--SGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTI 118 (380)
T ss_pred HHHHHHHHHHHhCCC-------C---EEEECCHHHHHHHHHHHc-C--CCCEEEEcCCChhHHHHHHHHHHHhcCeEEEE
Confidence 457888888875221 1 245666677888766543 3 9999999999998654 344567877776
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++. .|++.+++++.. +.+++++ ++|+||||.+++ +++|+++|+++++++|+|++|.....+ .
T Consensus 119 vd~-------~d~e~l~~ai~~--~t~lV~l-esP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~---~-- 180 (380)
T PRK06176 119 IDT-------SDLSQIKKAIKP--NTKALYL-ETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ---N-- 180 (380)
T ss_pred cCC-------CCHHHHHHhcCc--CceEEEE-ECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC---C--
Confidence 643 378888887752 3344444 899999999986 668888999999999999999754321 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
++ ..+. -+++.|++|.++-+|-.+|-+++ ..++++.+++.
T Consensus 181 -p~----~~ga-Divv~S~tK~l~g~~d~~gG~vv-~~~~~~~~~~~ 220 (380)
T PRK06176 181 -PL----LLGA-DIVVHSGTKYLGGHSDVVAGLVT-TNNEALAQEIA 220 (380)
T ss_pred -cc----ccCC-CEEEecCceeccCCccceeeEEE-ecHHHHHHHHH
Confidence 11 1122 37788999999867754444433 24555544443
No 215
>PRK14012 cysteine desulfurase; Provisional
Probab=99.55 E-value=8.6e-14 Score=134.74 Aligned_cols=164 Identities=15% Similarity=0.062 Sum_probs=116.6
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh--hCCCCeEEEcCCCCcchHHHHH---hcCceee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR--FHPDSQIYIPVPTWSNHHNIWR---DAHVTQR 169 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~--~~pgd~Vlv~~P~y~~y~~~~~---~~G~~~~ 169 (337)
..++|+.+++++ +. +++. ++.|.|+++++.+++..+.. ..+||+|+++++.|+.+...++ ..|++++
T Consensus 51 ~~~~r~~ia~~~-g~-----~~~~--v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~ 122 (404)
T PRK14012 51 VDIARNQIADLI-GA-----DPRE--IVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVT 122 (404)
T ss_pred HHHHHHHHHHHc-Cc-----CcCe--EEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEE
Confidence 456788888875 32 1233 57889999999988766542 2389999999999988765544 4699999
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++.. . ++.+|++.+++.+.. + +.+++.+++|||||.+++ +++|.++|+++++++|+|+++.- .. ..-+
T Consensus 123 ~v~~~-~-~g~~d~~~l~~~i~~--~-t~lv~~~~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~-g~--~~~~ 191 (404)
T PRK14012 123 YLDPQ-S-NGIIDLEKLEAAMRD--D-TILVSIMHVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSV-GK--VPID 191 (404)
T ss_pred EEccC-C-CCcCCHHHHHHhcCC--C-CEEEEEECcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhc-CC--cccC
Confidence 88873 3 567899999998863 3 345555899999999986 57888999999999999998752 11 1000
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
+...+.. +++.|+.|.+| |+ ++|++++.
T Consensus 192 ------~~~~~~D-~~~~s~~K~~g-p~-g~G~l~~~ 219 (404)
T PRK14012 192 ------LSKLKVD-LMSFSAHKIYG-PK-GIGALYVR 219 (404)
T ss_pred ------cccCCCC-EEEEehhhccC-CC-ceEEEEEe
Confidence 1111222 44458889887 44 68999873
No 216
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.55 E-value=1.1e-12 Score=125.85 Aligned_cols=171 Identities=11% Similarity=0.040 Sum_probs=119.1
Q ss_pred CCCCCCCCCH---HHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH---
Q 047180 87 MEYLPMGGSV---KMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI--- 160 (337)
Q Consensus 87 ~~Y~~~~G~~---~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~--- 160 (337)
+.|+- .|.| .|.+.+|++. +. + .++++.||++|+.+++..+.. |||+|++++|.|+.....
T Consensus 42 ~~Y~r-~gnPt~~~lE~~lA~l~-g~-------~--~~~~~~sG~~Ai~~al~all~--~GD~Vl~~~~~y~~t~~~~~~ 108 (377)
T TIGR01324 42 LTYGR-RGTLTHFALQDAMCELE-GG-------A--GCYLYPSGLAAVTNSILAFVK--AGDHVLMVDSAYEPTRYFCDI 108 (377)
T ss_pred CcccC-CCCccHHHHHHHHHHHh-CC-------C--cEEEECcHHHHHHHHHHHhcC--CCCEEEEcCCCcHHHHHHHHH
Confidence 45764 5664 8999999875 32 1 256889999999998877655 999999999999876543
Q ss_pred -HHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC
Q 047180 161 -WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 161 -~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
++..|.++..++. . +.+.+++.+.+ +.+ ++++++|+||||.+ .++++|+++|+++++++|+|++|.
T Consensus 109 ~~~~~gi~v~~~d~------~-~~e~l~~~i~~--~tk-lV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a 175 (377)
T TIGR01324 109 VLKRMGVDITYYDP------L-IGEDIATLIQP--NTK-VLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWA 175 (377)
T ss_pred HHHhcCcEEEEECC------C-CHHHHHHhcCC--Cce-EEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCc
Confidence 3557777665532 1 12677777652 334 44458999999776 578999999999999999999996
Q ss_pred CCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc-ccccceeEeeeCCHHHHHHHH
Q 047180 240 GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY-GQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G~RvG~~~~~~~~~~~~~~~~ 297 (337)
.-.. +. ++ ..+. -+++.|++|.++-+ +...|+++. +++..+++.
T Consensus 176 ~g~~--~~----pl----~~ga-Divv~S~tK~l~G~~d~~gG~v~~---~~~~~~~l~ 220 (377)
T TIGR01324 176 AGLL--FK----PL----EHGV-DISIQAGTKYLVGHSDIMIGTVVA---NARTWDQLR 220 (377)
T ss_pred cccc--cC----cc----ccCc-eEEEecCceeccCCCCceEEEEEe---CHHHHHHHH
Confidence 4221 10 11 1122 37889999999633 467887654 565555554
No 217
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.54 E-value=1.6e-12 Score=124.70 Aligned_cols=240 Identities=13% Similarity=0.060 Sum_probs=145.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|.... .....|.+.+|+.+ +... ..| +..-..++++.+++.+.+.. +.+ ++.+++|++
T Consensus 29 ~~~lD~~s~~~~~---~lG~~p~v~~a~~~~~~~~--~~~-~~~~~~~~~~~la~~l~~~~------~~~-~~~~~SGse 95 (375)
T PRK04260 29 KKYLDFSSGIGVT---NLGFHPQVQQALQKQAGLI--WHS-PNLYLNSLQEEVAQKLIGDK------DYL-AFFCNSGAE 95 (375)
T ss_pred CEEEECCCCcccc---cCCCCHHHHHHHHHHHHhc--Ccc-cCccCCHHHHHHHHHHhcCc------CCE-EEEcCccHH
Confidence 3468886652110 11124557666654 3221 122 22234678889998764421 222 467889999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchH-HHHHhcCceee---------EeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHH-NIWRDAHVTQR---------TFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~-~~~~~~G~~~~---------~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
+...++.+......+++|++.+..|.... ..+...|.+.. .++.. .-.|++.+++.+. .+..+
T Consensus 96 A~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~dl~~l~~~l~---~~~a~ 168 (375)
T PRK04260 96 ANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA----IFNDLNSVKALVN---KNTAA 168 (375)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe----CCCCHHHHHHhcC---CCeEE
Confidence 99988876644335689999999999743 33333333211 11110 0137888888764 23345
Q ss_pred EEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccc
Q 047180 200 LLHACAHNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ 278 (337)
Q Consensus 200 li~~~p~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 278 (337)
++..+++|++|... +.+.+++|.++|+++|+++|+||+|.+|... ....+.. .....+++ .||||.++ +|+
T Consensus 169 vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~---g~~~~~~-~~~~~pdi---~t~sK~l~-~G~ 240 (375)
T PRK04260 169 VMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRT---GKLYAFE-HYGIEPDI---FTLAKGLA-NGV 240 (375)
T ss_pred EEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---cchhhhH-hhCCCCCE---EEeccccc-CCc
Confidence 55588999999975 5688999999999999999999999887431 1111111 11222343 38999999 799
Q ss_pred ccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 279 RVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 279 RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|+||++++ ++..+.+ .........+.+.++|.++..+|+.
T Consensus 241 ~ig~~~~~---~~~~~~~----~~~~~~~t~~~~~~~~~aa~a~l~~ 280 (375)
T PRK04260 241 PVGAMLAK---SSLGGAF----GYGSHGSTFGGNKLSMAAASATLDI 280 (375)
T ss_pred ceEEEEEc---HHHHhhc----CCCCCCCCCCcCHHHHHHHHHHHHH
Confidence 99999873 4433333 2211222224567788888888853
No 218
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.53 E-value=2.8e-13 Score=129.38 Aligned_cols=179 Identities=17% Similarity=0.088 Sum_probs=119.2
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh----CCCCeEEEcCCCCcchHHHHHhcCceeeEe
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF----HPDSQIYIPVPTWSNHHNIWRDAHVTQRTF 171 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~----~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~ 171 (337)
.++++.+++++ +. ++++ ++++.|+++++.+++.++..+ .+||+|++++|+|..|...++..|++++.+
T Consensus 62 ~~~~~~la~~~-g~-----~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v 133 (373)
T TIGR03812 62 EEVVGSLGNLL-HL-----PDAY--GYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYA 133 (373)
T ss_pred HHHHHHHHHHh-CC-----CCCC--eEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEE
Confidence 45667777765 32 1222 357889999887776554421 267999999999999999999999999999
Q ss_pred eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc---
Q 047180 172 HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER--- 248 (337)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~--- 248 (337)
+.. . ++.+|++++++.+.+ ....+++++ |+||||.+.+ +++|.++|+++++++++|++|..+..+ +..
T Consensus 134 ~~~-~-~~~~d~~~l~~~l~~--~~~~vv~~~-~~~~tG~~~~---~~~i~~l~~~~~~~livD~a~~~~~~~-~~~~~~ 204 (373)
T TIGR03812 134 PLD-E-DYTVDVKDVEDLIDD--NTIGIVGIA-GTTELGQIDD---IEELSKIALENGIYLHVDAAFGGFVIP-FLKKGY 204 (373)
T ss_pred eeC-C-CCCcCHHHHHHHHhh--CcEEEEEEC-CCCCCCccCC---HHHHHHHHHHcCCeEEEEcCchhHHHH-HHhcCC
Confidence 873 2 577899999998864 233445544 7999999965 667788899999999999999765310 000
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
....+. +...+-+. +..|..| |++++.|.|++++ .+++.++.+
T Consensus 205 ~~~~~d-~~~~~~d~-~~~s~~K-~~~~~~~~G~~~~--~~~~~~~~l 247 (373)
T TIGR03812 205 NPPPFD-FSLPGVQS-ITIDPHK-MGLSPIPAGGILF--RSKSYLKYL 247 (373)
T ss_pred CCCCcc-ccCCCCCE-EEECccc-cCCCcCCceEEEE--eCHHHHhhh
Confidence 000000 00001122 2245568 7778899998765 355554443
No 219
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.52 E-value=3.5e-13 Score=131.20 Aligned_cols=155 Identities=18% Similarity=0.147 Sum_probs=113.8
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch----HHHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH----HNIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y----~~~~~~~G~~~~~ 170 (337)
...|.+.++++. +.. ..+.+++|++|+.+++..+.. |||+|+++.|.|+.- ...++..|.+++.
T Consensus 65 ~~~le~~lA~l~-g~~---------~al~~~SG~~Ai~~al~all~--pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~ 132 (427)
T PRK05994 65 NAVLEERVAALE-GGT---------AALAVASGHAAQFLVFHTLLQ--PGDEFIAARKLYGGSINQFGHAFKSFGWQVRW 132 (427)
T ss_pred HHHHHHHHHHHh-CCC---------cEEEEcCHHHHHHHHHHHHhC--CCCEEEEecCcchhHHHHHHHHHHhcCcEEEE
Confidence 356788888875 321 146788899999988877655 999999999999963 3446778988887
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++. .|++.+++++.. +.+++++ ++|+||||.+++ +++|+++|+++++++|+|+++..-.. . .
T Consensus 133 vd~-------~d~~~l~~ai~~--~tklV~v-esp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~~--~-~-- 194 (427)
T PRK05994 133 ADA-------DDPASFERAITP--RTKAIFI-ESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPYL--I-R-- 194 (427)
T ss_pred ECC-------CCHHHHHHhcCc--CCeEEEE-ECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCcccccc--C-C--
Confidence 753 268888888753 3445554 899999999997 67888999999999999999863211 0 0
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+ + ..+.. +++.|++|.+|-+|-.+|.+++
T Consensus 195 -p---l-~~gaD-ivv~S~tK~lgg~~~~~gG~v~ 223 (427)
T PRK05994 195 -P---I-EHGAD-IVVHSLTKFLGGHGNSMGGIIV 223 (427)
T ss_pred -c---c-ccCCc-EEEEcCccccCCCCCcEEEEEE
Confidence 1 1 11222 7779999999977877887665
No 220
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.51 E-value=7.1e-13 Score=127.13 Aligned_cols=162 Identities=18% Similarity=0.091 Sum_probs=112.8
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh-hCCCCeEEEcCCCCcchHHH---HHhcCceeeEe
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR-FHPDSQIYIPVPTWSNHHNI---WRDAHVTQRTF 171 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~-~~pgd~Vlv~~P~y~~y~~~---~~~~G~~~~~~ 171 (337)
.++|+.+++++ +. ++++ ++.|.|+++++.+++..+.. ..+||+|++....|+.+... ++..|.+++.+
T Consensus 45 ~~~r~~la~~~-g~-----~~~~--i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v 116 (379)
T TIGR03402 45 EEAREQVAKLL-GA-----EPDE--IIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYL 116 (379)
T ss_pred HHHHHHHHHHh-CC-----CCCe--EEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEE
Confidence 45667777765 32 2333 57899999999988865532 12578999999888876543 44569999999
Q ss_pred eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchH
Q 047180 172 HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
|+. . ++.+|++.+++.+.+ +..+++++++|||||.+++. ++|.++|+++|+++++|+++.. .. ..
T Consensus 117 ~~~-~-~g~~~~~~l~~~i~~---~~~lv~i~~~~n~tG~~~~~---~~I~~l~~~~g~~vivD~~~~~-g~--~~---- 181 (379)
T TIGR03402 117 PVD-E-EGRLDLEELRAAITD---DTALVSVMWANNETGTIFPI---EEIGEIAKERGALFHTDAVQAV-GK--IP---- 181 (379)
T ss_pred ccC-C-CCcCCHHHHHHhcCC---CcEEEEEEcccCCeeecccH---HHHHHHHHHcCCEEEEECcccc-cc--cc----
Confidence 873 2 466899999998853 34555558999999999996 4688899999999999998752 11 10
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+. +...+.. +++.|..|.+|.+| +|++++
T Consensus 182 -~~-~~~~~~D-~~~~s~~K~~gp~G--~g~l~v 210 (379)
T TIGR03402 182 -ID-LKEMNID-MLSLSGHKLHGPKG--VGALYI 210 (379)
T ss_pred -cC-cccCCCC-EEEEcHHHcCCCCc--eEEEEE
Confidence 00 1111222 44456779888777 788776
No 221
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.51 E-value=2.2e-12 Score=124.72 Aligned_cols=187 Identities=11% Similarity=-0.006 Sum_probs=113.4
Q ss_pred EEeeccchhHHHHHHHHHhhh-----C--CC-CeEEEcCCCCcchHHHHHhcCceeeE---e-eeccC--CCCCCChHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRF-----H--PD-SQIYIPVPTWSNHHNIWRDAHVTQRT---F-HYYHP--GTKGLDFAAL 186 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~-----~--pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~---~-~~~~~--~~~~~d~~~l 186 (337)
++.+++|++|+..++.++... . +| ++|++.+-+|......+...+..... + +.... .-.-.|++.+
T Consensus 101 ~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 180 (401)
T PRK00854 101 VLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEAL 180 (401)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCCCCHHHH
Confidence 578899999999998777432 1 23 67888887776654333222221100 0 00000 0011478899
Q ss_pred HHHHHcCCCCeEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE
Q 047180 187 MDDIKNAPNGSFFLLHACAHNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL 265 (337)
Q Consensus 187 ~~~l~~~~~~~~ili~~~p~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (337)
++.+.. + ..++++++|+||||.+++ .+.|++|.++|++||+++|+||+|.+|... ....... ......++++
T Consensus 181 e~~i~~--~-~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~---g~~~~~~-~~g~~~D~~~ 253 (401)
T PRK00854 181 EAAITP--N-TVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRT---GKLLAEE-HEGIEADVTL 253 (401)
T ss_pred HHHhCC--C-eEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCC---chHhHHh-hcCCCCCEEE
Confidence 888752 3 344555889999999997 456999999999999999999999877431 1011111 1111223333
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+||.++-.+||+|++++ ++++.+.+ .........+.+.+.|.++...|+
T Consensus 254 ---~~K~l~gg~~~ig~v~~---~~~~~~~l----~~~~~~~t~~~~~~~~aa~~a~L~ 302 (401)
T PRK00854 254 ---IGKALSGGFYPVSAVLS---NSEVLGVL----KPGQHGSTFGGNPLACAVARAALK 302 (401)
T ss_pred ---ecccccCCccCeEEEEE---cHHHHhcc----cCCCCCCCCCcCHHHHHHHHHHHH
Confidence 47999854479999876 45444433 222222222457778888887775
No 222
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.51 E-value=9.2e-13 Score=130.23 Aligned_cols=202 Identities=12% Similarity=0.103 Sum_probs=131.2
Q ss_pred eeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCC---CCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHH
Q 047180 56 VGVGAYRDDNGKPVVLECVREAERRI-AGTANMEY---LPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGAC 131 (337)
Q Consensus 56 l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y---~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al 131 (337)
++.|.+. ...+|.+.+++... .....+.| ..++|..+++..+.+++....+. + ++.+..+.|+++.+
T Consensus 73 ~g~G~~~-----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~--~--~~~l~~~~GA~a~~ 143 (481)
T PRK04366 73 YPLGSCT-----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGM--D--AVTLQPAAGAHGEL 143 (481)
T ss_pred ecCcccC-----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCC--C--ceEEEeCcHHHHHH
Confidence 5666543 33456666655443 11234567 34679999999999888554332 2 23333344445444
Q ss_pred HHHH--H-HHhhhCCCC----eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCC
Q 047180 132 RLFA--D-FQKRFHPDS----QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHAC 204 (337)
Q Consensus 132 ~~~~--~-~l~~~~pgd----~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~ 204 (337)
..++ + ++.. +|| +|++++|.|+.|...++..|.+++.+|+ +. ++.+|++.+++.+.. +.+.+++ ++
T Consensus 144 ~~l~~~r~~~~~--~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~-~~-~~~~D~e~L~~~i~~--~t~~V~v-~~ 216 (481)
T PRK04366 144 TGLLMIRAYHEA--RGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPS-NE-DGLVDLEALKAAVGE--DTAALML-TN 216 (481)
T ss_pred HHHHHHHHHhhc--cCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeec-CC-CCCcCHHHHHhhccc--CCeEEEE-eC
Confidence 4332 1 2223 676 9999999999999999999999999998 33 578999999988753 3344454 67
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc----cccc
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY----GQRV 280 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~----G~Rv 280 (337)
|| |||.+ .+++++|+++|++++.++++|.++.--..+.. + . ...+-. +++.|.-|.|+.| |-.+
T Consensus 217 Pn-~tG~~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~--~---~---~~~GaD-~~~~~~hK~l~~P~g~Ggp~~ 284 (481)
T PRK04366 217 PN-TLGLF--ERNILEIAEIVHEAGGLLYYDGANLNAILGKA--R---P---GDMGFD-VVHLNLHKTFSTPHGGGGPGS 284 (481)
T ss_pred CC-Ccccc--chHHHHHHHHHHHcCCEEEEEecChhhhcccC--C---c---cccCCC-EEEEechhhcCCCCCCCCCCe
Confidence 87 99954 45799999999999999999998731101100 0 0 111222 4556667988754 4567
Q ss_pred ceeEe
Q 047180 281 GCLSV 285 (337)
Q Consensus 281 G~~~~ 285 (337)
|++.+
T Consensus 285 G~l~~ 289 (481)
T PRK04366 285 GPVGV 289 (481)
T ss_pred eeeee
Confidence 78765
No 223
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.51 E-value=2.7e-12 Score=123.25 Aligned_cols=171 Identities=11% Similarity=-0.021 Sum_probs=113.8
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCe
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 197 (337)
+.+.+|++|+..++..+.+ |||+|++++|.|+++.. .++..|.++..++.. +.+.+++++.+ +.+
T Consensus 83 v~~sSG~aAi~~~l~all~--~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-------~~e~l~~al~~--~Tk 151 (395)
T PRK05967 83 ILVPSGLAAVTVPFLGFLS--PGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-------IGAGIAKLMRP--NTK 151 (395)
T ss_pred EEECcHHHHHHHHHHHhcC--CCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-------CHHHHHHhcCc--Cce
Confidence 5677789999988876665 99999999999999875 457788887776431 34678877753 334
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc-cc
Q 047180 198 FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG-LY 276 (337)
Q Consensus 198 ~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~ 276 (337)
+ |++++|+||+| +..++++|+++|+++|+++|+|++|....+. .++. .+- =+++.|.+|.++ -.
T Consensus 152 l-V~lesPsNP~l---~v~dl~~I~~la~~~g~~vvVD~t~a~p~~~------~pl~----~Ga-Divv~S~tKy~~Gh~ 216 (395)
T PRK05967 152 V-VHTEAPGSNTF---EMQDIPAIAEAAHRHGAIVMMDNTWATPLYF------RPLD----FGV-DISIHAATKYPSGHS 216 (395)
T ss_pred E-EEEECCCCCCC---cHHHHHHHHHHHHHhCCEEEEECCccCceec------ChhH----cCC-CEEEEecccccCCCC
Confidence 4 44589999965 6678999999999999999999999764321 1111 222 278899999974 23
Q ss_pred ccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+...|+++ .+++..+++..... ..-.+.+.+....+.+-|+.
T Consensus 217 d~~~G~v~---~~~~~~~~l~~~~~----~~G~~~~p~da~l~~rgl~T 258 (395)
T PRK05967 217 DILLGTVS---ANEKCWPQLLEAHG----TLGLCAGPDDTYQILRGLRT 258 (395)
T ss_pred CeeEEEEE---cCHHHHHHHHHHHH----HcCCCCCHHHHHHHHcCccc
Confidence 46677554 35554444432211 12223455555444444443
No 224
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.51 E-value=3.4e-13 Score=130.52 Aligned_cols=164 Identities=14% Similarity=0.052 Sum_probs=116.0
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh--hCCCCeEEEcCCCCcchHHHH---HhcCcee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR--FHPDSQIYIPVPTWSNHHNIW---RDAHVTQ 168 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~--~~pgd~Vlv~~P~y~~y~~~~---~~~G~~~ 168 (337)
.+.++|+.+++++ +. ++++ ++.|.|+++++.+++..+.. ..+||+|+++.+.|+.+...+ +..|.++
T Consensus 48 ~~~~~r~~la~~~-g~-----~~~~--v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v 119 (402)
T TIGR02006 48 AVENARNQVAELI-GA-----DSRE--IVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEV 119 (402)
T ss_pred HHHHHHHHHHHHh-CC-----CCCe--EEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEE
Confidence 3556788888875 32 2333 57889999999988765532 137999999999999866544 4569999
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
+.+++. + ++.+|++.+++.+.+ . +.+++++++|||||.+.+ +++|.++|+++|+++++|+++.--.. .+
T Consensus 120 ~~v~~~-~-~~~~d~~~l~~~l~~--~-~~lv~v~~~~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~~-~~-- 188 (402)
T TIGR02006 120 TYLPPK-S-NGLIDLEELKAAIRD--D-TILVSIMHVNNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGKI-PI-- 188 (402)
T ss_pred EEEccC-C-CCcCCHHHHHHhcCC--C-CEEEEEECCCcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCCc-cc--
Confidence 999873 2 467899999988853 3 345555899999999986 66888999999999999999742110 01
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+ +...+.. +++.|+.|.+|.+| +|++++
T Consensus 189 ~------~~~~~~D-~~~~s~~K~~gp~G--~G~l~~ 216 (402)
T TIGR02006 189 N------VNELKVD-LMSISGHKIYGPKG--IGALYV 216 (402)
T ss_pred C------ccccCCC-EEEEehhhhcCCCc--eEEEEE
Confidence 0 1111222 45566779888667 888876
No 225
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.50 E-value=2.4e-12 Score=124.37 Aligned_cols=188 Identities=12% Similarity=0.013 Sum_probs=113.0
Q ss_pred EEeeccchhHHHHHHHHHhhh--------CCCCeEEEcCCCCcchHHHH-HhcCceeeE---eeeccC--CCCCCChHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRF--------HPDSQIYIPVPTWSNHHNIW-RDAHVTQRT---FHYYHP--GTKGLDFAAL 186 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~--------~pgd~Vlv~~P~y~~y~~~~-~~~G~~~~~---~~~~~~--~~~~~d~~~l 186 (337)
++.+++|++|...++.++... ..++.|++.+=.|....... ...+..... .+.... .-...|++.+
T Consensus 91 ~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l 170 (400)
T PTZ00125 91 VLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEAL 170 (400)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHH
Confidence 467888999998888765421 02478888888888765333 333321110 011000 0011378999
Q ss_pred HHHHHcCCCCeEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE
Q 047180 187 MDDIKNAPNGSFFLLHACAHNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL 265 (337)
Q Consensus 187 ~~~l~~~~~~~~ili~~~p~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (337)
++.++. ++.+++++ .++|||||.+++ ++.+++|.++|++||+++|+||+|.+|... ...... ......++++
T Consensus 171 e~~l~~-~~~~~v~~-ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~---G~~~~~-~~~~~~pd~~- 243 (400)
T PTZ00125 171 EKLLQD-PNVAAFIV-EPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRT---GKLLAH-DHEGVKPDIV- 243 (400)
T ss_pred HHHhCC-CCeEEEEE-cCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc---chhhHH-HhcCCCCCEE-
Confidence 988852 23344444 668999999996 566999999999999999999999887421 111111 1111122333
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+|||.++.+++|+||+++ ++++.+.+. ........+.+.+.|.++..+|+
T Consensus 244 --~~sK~l~~g~~~ig~v~~---~~~~~~~~~----~~~~~~t~~~~~~~~~aa~~~l~ 293 (400)
T PTZ00125 244 --LLGKALSGGLYPISAVLA---NDDVMLVIK----PGEHGSTYGGNPLACAVAVEALE 293 (400)
T ss_pred --EEcccccCCCcCcEEEEE---cHHHHhhcc----CCCCCCCCCcCHHHHHHHHHHHH
Confidence 478999965569999886 445444432 21122222346677777766553
No 226
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.50 E-value=9.3e-13 Score=128.38 Aligned_cols=245 Identities=14% Similarity=0.030 Sum_probs=148.8
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|.....-| ...|.|.+++.+ +... ...|.+..+..+|.+.+++...+ .+. ++.+++|++
T Consensus 50 ~~~lD~~~g~~~~~lG--h~~p~i~~a~~~~~~~~-~~~~~~~~~~~~la~~L~~~~~~-------~~~--v~~~~sGse 117 (426)
T PRK00062 50 NEYIDYVGSWGPMILG--HAHPEVVEAVIEAAEKG-LSFGAPTELEVELAELVIELVPS-------IEM--VRMVNSGTE 117 (426)
T ss_pred CEEEEcccchhhhhcC--CCCHHHHHHHHHHHHhC-CcCCCCCHHHHHHHHHHHHhCCC-------CCE--EEEecCHHH
Confidence 4678988774321112 244666666544 4332 23345555666777777776411 123 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh-cCce------------eeEee--eccCCCCCCChHHHHHHHHcCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD-AHVT------------QRTFH--YYHPGTKGLDFAALMDDIKNAP 194 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~-~G~~------------~~~~~--~~~~~~~~~d~~~l~~~l~~~~ 194 (337)
|...++.+......+++|+..+++|.++...+.. .|.. .+.++ .... .--|++.+++.+...+
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~d~~~l~~~i~~~~ 195 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTA--PYNDLEAVEELFEEYG 195 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEc--CCCCHHHHHHHHHhCC
Confidence 9999987755533468999999999998643322 1110 00000 0000 0126788888776432
Q ss_pred -CCeEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccc
Q 047180 195 -NGSFFLLHACAHNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKN 272 (337)
Q Consensus 195 -~~~~ili~~~p~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 272 (337)
+...+++-+.++| +|.+.+ .+.+++|.++|++||+++|.||+|.+|..+. ......+ ...+. +.+|||.
T Consensus 196 ~~~aaiivEpv~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~----~~~~~~~-~~~pD---i~~~gK~ 266 (426)
T PRK00062 196 DEIAAVIVEPVAGN-MGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVAL----GGAQGYY-GVTPD---LTTLGKI 266 (426)
T ss_pred CcEEEEEEeCCcCC-CCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCC----ccHHHHh-CCCcc---hHhhhhH
Confidence 3345666667777 888876 8889999999999999999999999885431 1111111 11122 3589999
Q ss_pred ccccccccceeEeeeCCHHHHHHHHHHHHhhhc-ccccCCChhHHHHHHHHhC
Q 047180 273 MGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLAR-PMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 273 ~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~~~~~~l~ 324 (337)
++ .||++|++++ ++++.+.+... ..... +++ +.+.+.+.++..+|+
T Consensus 267 l~-~G~p~ga~~~---~~~i~~~~~~~-~~~~~~~T~-~~~p~~~aaa~a~L~ 313 (426)
T PRK00062 267 IG-GGLPVGAFGG---RREIMEQLAPL-GPVYQAGTL-SGNPLAMAAGLATLK 313 (426)
T ss_pred hh-CCCcceeeeE---HHHHHHhhccC-CCceecccC-cCCHHHHHHHHHHHH
Confidence 99 8999999865 45554444210 11111 223 356677777766665
No 227
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.47 E-value=2.9e-12 Score=121.30 Aligned_cols=171 Identities=20% Similarity=0.108 Sum_probs=120.7
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
....+|++.+++++ +. +. ++.+.+|++++.+++..+. ..+||+|+++.|+|..+...++..|++++.++
T Consensus 18 ~~~~~~~~~la~~~-~~-------~~--~~~~~sgt~al~~~l~~l~-~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~ 86 (352)
T cd00616 18 PKVREFEKAFAEYL-GV-------KY--AVAVSSGTAALHLALRALG-IGPGDEVIVPSFTFVATANAILLLGATPVFVD 86 (352)
T ss_pred HHHHHHHHHHHHHh-CC-------Ce--EEEECCHHHHHHHHHHHcC-CCCCCEEEeCCcchHHHHHHHHHcCCeEEEEe
Confidence 35788999999987 32 12 4577889999999887763 13899999999999999999999999999998
Q ss_pred eccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHH
Q 047180 173 YYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKA 252 (337)
Q Consensus 173 ~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~ 252 (337)
+. ++++.+|++.+++.+. ++.+++++ .||||.+.+ +++|.++|+++++++|+|+++..... +. + ..
T Consensus 87 ~~-~~~~~~d~~~l~~~i~--~~~~~v~~----~~~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~g~~--~~-~-~~ 152 (352)
T cd00616 87 ID-PDTYNIDPELIEAAIT--PRTKAIIP----VHLYGNPAD---MDAIMAIAKRHGLPVIEDAAQALGAT--YK-G-RK 152 (352)
T ss_pred cC-CCcCCcCHHHHHHhcC--cCCeEEEE----ECCCCCcCC---HHHHHHHHHHcCCeEEEECCCCCCCe--EC-C-EE
Confidence 73 3367889999998874 23344444 358998875 66778889999999999999863221 10 0 00
Q ss_pred HHHhhhcCCeEEEEeccc--ccccccccccceeEeeeCCHHHHHHHH
Q 047180 253 IRIFLKDGHLLGLAQSYA--KNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 253 ~~~~~~~~~~~i~~~S~S--K~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
+...+ -+.+.||+ |.++ +-+.|+++. .++++.+++.
T Consensus 153 ---~~~~~--d~~~~S~~~~K~~~--~~~gg~~~~--~~~~~~~~~~ 190 (352)
T cd00616 153 ---VGTFG--DAGAFSFHPTKNLT--TGEGGAVVT--NDEELAERAR 190 (352)
T ss_pred ---cccCc--ceeEEcCCCCCCCc--ccCceEEEE--CCHHHHHHHH
Confidence 10111 24556766 8774 445677765 5666665553
No 228
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.40 E-value=5e-11 Score=116.68 Aligned_cols=187 Identities=12% Similarity=0.082 Sum_probs=112.2
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH-HHHHhcCc------------eeeEeeeccCCC--CC-----
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH-NIWRDAHV------------TQRTFHYYHPGT--KG----- 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~-~~~~~~G~------------~~~~~~~~~~~~--~~----- 180 (337)
+..+++|++|...++.+.........|+...-.|.+.. ..+...|. .+..+|+.+... +.
T Consensus 104 v~f~~sGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (443)
T PRK08360 104 VSFGLSGSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGS 183 (443)
T ss_pred EEEcCCHHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhh
Confidence 57899999999999876554433467888777777753 22232231 122222211100 11
Q ss_pred ---CChHHHHHHHHcC---CCCeEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 181 ---LDFAALMDDIKNA---PNGSFFLLHACAHNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 181 ---~d~~~l~~~l~~~---~~~~~ili~~~p~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
-+++.+++.++.. .+...+++ ..-+||||.+++ ++.+++|.++|++||+++|+||+|.+|... ....+.
T Consensus 184 ~~~~~~~~~~~~l~~~~~~~~iAAvi~-eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~---G~~~a~ 259 (443)
T PRK08360 184 CKMECVEYIKEKFEGEVYAEGVAALFA-EPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRT---GKWFAI 259 (443)
T ss_pred hHHHHHHHHHHHHHhccCCCCeEEEEE-CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---ccchhh
Confidence 1234455556431 22334555 435699999887 667999999999999999999999988531 111111
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhh-cccccCCChhHHHHHHHHhC
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLA-RPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~~~~~~l~ 324 (337)
..+ ...++++ +|||.++ +|+|+||+++ ++++.+.+. ... ..+++ .+.++|.++..+|+
T Consensus 260 ~~~-~~~pDii---tlsK~l~-~G~pigav~~---~~~i~~~~~----~~~~~~T~~-~~p~~~aaa~a~l~ 318 (443)
T PRK08360 260 EHF-GVEPDII---TLGKPLG-GGLPISATIG---RAEIMDSLP----PLAHAFTLS-GNPVASAAALAVIE 318 (443)
T ss_pred hhc-CCCCCEE---Eeccccc-CCceeEEEEE---cHHHHhhhc----CCCCCCCCC-cCHHHHHHHHHHHH
Confidence 112 2223443 6799999 8999999876 355444442 221 22343 45666777777665
No 229
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.40 E-value=5.3e-11 Score=115.87 Aligned_cols=190 Identities=13% Similarity=0.068 Sum_probs=116.4
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCce-------------eeEeeeccCCCCCC----C
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHVT-------------QRTFHYYHPGTKGL----D 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~~-------------~~~~~~~~~~~~~~----d 182 (337)
++.+++|++|...++.+........+|+...-+|.+... .+...|.. ++.+|+... ..++ +
T Consensus 104 ~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~-~~~~~~~~~ 182 (421)
T PRK09792 104 TAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSD-LHGISTQDS 182 (421)
T ss_pred EEEeCChHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc-cccccHHHH
Confidence 467789999999988765543233688999988888643 22222210 122222111 1122 2
Q ss_pred hHHHHHHHHc---CCCCeEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh
Q 047180 183 FAALMDDIKN---APNGSFFLLHACAHNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK 258 (337)
Q Consensus 183 ~~~l~~~l~~---~~~~~~ili~~~p~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 258 (337)
++.+++.+.+ ..+-..+++-|. ++|+|.++ +++.+++|.++|+++++++|+||+|.+|... ....+...+.
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~EPv-q~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~---G~~~a~~~~~- 257 (421)
T PRK09792 183 LDAIERLFKSDIEAKQVAAIIFEPV-QGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFART---GKLFAMDHYA- 257 (421)
T ss_pred HHHHHHHHHhccCCCceEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC---CchhHHHhcC-
Confidence 4677776653 122345666565 99999875 9999999999999999999999999998531 1122222231
Q ss_pred cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHH---HHHHHhCCHH
Q 047180 259 DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGAL---IVSTILGDAE 327 (337)
Q Consensus 259 ~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~---~~~~~l~~~~ 327 (337)
..+. +.+|||.++ +|+|+||+++ +.++.+.+.. .....++. .+.++|. ++..++++++
T Consensus 258 ~~pD---i~t~gK~l~-~G~pigav~~---~~~i~~~~~~---~~~~~T~~-gnpl~~aaa~a~l~~l~~~~ 318 (421)
T PRK09792 258 DKPD---LMTMAKSLA-GGMPLSGVVG---NANIMDAPAP---GGLGGTYA-GNPLAVAAAHAVLNIIDKES 318 (421)
T ss_pred CCCc---EEEeehhhc-CCCceEEEEE---cHHHHhccCC---CCcCCCCC-CCHHHHHHHHHHHHHHHhhh
Confidence 1223 578999999 8999999875 4444443321 11123343 4667777 4444454443
No 230
>PLN00144 acetylornithine transaminase
Probab=99.38 E-value=3.4e-11 Score=115.76 Aligned_cols=190 Identities=13% Similarity=0.026 Sum_probs=115.8
Q ss_pred EEeeccchhHHHHHHHHHhhhCC-------------CCeEEEcCCCCcchHHHHH-hcCceeeE---eeeccCCC--CCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHP-------------DSQIYIPVPTWSNHHNIWR-DAHVTQRT---FHYYHPGT--KGL 181 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~p-------------gd~Vlv~~P~y~~y~~~~~-~~G~~~~~---~~~~~~~~--~~~ 181 (337)
+..+++|++|...++.+...+.. ..+|+...-+|.+...... ..+..... .|...... .--
T Consensus 75 v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 154 (382)
T PLN00144 75 VFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYG 154 (382)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCC
Confidence 57889999999988865543210 2479999999988754333 23321110 11100000 012
Q ss_pred ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc
Q 047180 182 DFAALMDDIKNAPNGSFFLLHACAHNPTGVDPS--EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD 259 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s--~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 259 (337)
|++.+++.+.. .....+++.|. ||| |.+++ ++.+++|.++|++||+++|+||+|.+|... ....+.. +...
T Consensus 155 d~~~l~~~~~~-~~~aavi~eP~-q~~-gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~---g~~~~~~-~~~~ 227 (382)
T PLN00144 155 NLEAARKLIQK-GKTAAVFVEPV-QGE-GGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRT---GYLWAHE-AYGV 227 (382)
T ss_pred CHHHHHHhcCC-CCeEEEEEccc-cCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---chHhhhh-hcCC
Confidence 67888877743 23456777777 999 55555 445999999999999999999999988431 1111111 1122
Q ss_pred CCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHH---HHhCCHHH
Q 047180 260 GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVS---TILGDAEL 328 (337)
Q Consensus 260 ~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~---~~l~~~~~ 328 (337)
.++ +.+|||.++ +|+|+||+++ .+++.+.+.. .....+++ .+.+++.++. .+++++++
T Consensus 228 ~PD---i~t~sK~l~-~G~pig~v~~---~~~~~~~~~~---~~~~~T~~-~~pl~~aaa~a~l~~i~~~~~ 288 (382)
T PLN00144 228 EPD---IMTLAKPLA-GGLPIGAVLV---TEKVASAINP---GDHGSTFA-GGPLVCNAALAVLDKISKPGF 288 (382)
T ss_pred CCC---EEEeccccc-CCcceEEEEE---cHHHHhccCC---CCCCCCCC-CCHHHHHHHHHHHHHHhhchH
Confidence 233 678999999 7999999987 3444333321 11223443 5667788888 56665543
No 231
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.37 E-value=1e-10 Score=113.11 Aligned_cols=183 Identities=9% Similarity=0.036 Sum_probs=115.0
Q ss_pred EEeeccchhHHHHHHHHHhhh-------CC-CCeEEEcCCCCcch-HHHHHhcCc------------eeeEeeeccCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRF-------HP-DSQIYIPVPTWSNH-HNIWRDAHV------------TQRTFHYYHPGTK 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~-------~p-gd~Vlv~~P~y~~y-~~~~~~~G~------------~~~~~~~~~~~~~ 179 (337)
++.+++|++|...++.++... .+ .+.|+...-.|..- ...+...|. .++.++ +
T Consensus 97 ~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~ 170 (401)
T TIGR01885 97 VLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP------Y 170 (401)
T ss_pred EEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC------C
Confidence 578899999998888765332 12 36777788777753 334443331 112221 1
Q ss_pred CCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh
Q 047180 180 GLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK 258 (337)
Q Consensus 180 ~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 258 (337)
.|++.+++.+...+.+...+++.+.+|++|.+.+ .+.+++|.++|++|++++|+||+|.+|... ...... ....
T Consensus 171 -~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~---G~~~~~-~~~~ 245 (401)
T TIGR01885 171 -NNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRT---GKLLCV-DHEN 245 (401)
T ss_pred -CCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc---chhhHH-hhcC
Confidence 2678888888643334445555779999999986 456999999999999999999999886421 111111 1112
Q ss_pred cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 259 DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 259 ~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
..++++ .|||.++..|+|+|+++. ++++++.+.. .....+++ .+.+++.++..+|+
T Consensus 246 ~~~di~---~~gK~l~~g~~~ig~v~~---~~~i~~~~~~---~~~~~t~~-~~p~~~~aa~a~L~ 301 (401)
T TIGR01885 246 VKPDIV---LLGKALSGGVYPVSAVLA---DDDVMLTIKP---GEHGSTYG-GNPLACAVAVAALE 301 (401)
T ss_pred CCCCEE---EeeccccCCCCCcEEEEE---cHHHHhhccC---CCCCCCCC-CCHHHHHHHHHHHH
Confidence 223444 368999976699999885 4555444321 11122333 45677877777765
No 232
>PLN02651 cysteine desulfurase
Probab=99.37 E-value=2.4e-11 Score=115.98 Aligned_cols=163 Identities=15% Similarity=0.033 Sum_probs=110.1
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh--hCCCCeEEEcCCCCcchHH---HHHhcCceee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR--FHPDSQIYIPVPTWSNHHN---IWRDAHVTQR 169 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~--~~pgd~Vlv~~P~y~~y~~---~~~~~G~~~~ 169 (337)
..++|+.+++++ +. ++++ +++|.|+++++.+++..+.. ..+||+|++.+-.|+.+.. .++..|.+++
T Consensus 45 ~~~~r~~la~~~-g~-----~~~~--v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~ 116 (364)
T PLN02651 45 VEKARAQVAALI-GA-----DPKE--IIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVT 116 (364)
T ss_pred HHHHHHHHHHHh-CC-----CCCe--EEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEE
Confidence 345677777765 32 1233 57889999998887654422 1379999999977776543 3445788888
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.+++. . ++.+|++.+++.+.+ + ..+++++++|||||.+.+ +++|.++|+++|+++++|.++.--.. +++
T Consensus 117 ~v~~~-~-~~~~d~~~l~~~i~~--~-t~lv~v~~~~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~g~~-~~~-- 185 (364)
T PLN02651 117 YLPVK-S-DGLVDLDELAAAIRP--D-TALVSVMAVNNEIGVIQP---VEEIGELCREKKVLFHTDAAQAVGKI-PVD-- 185 (364)
T ss_pred EEccC-C-CCcCCHHHHHHhcCC--C-cEEEEEECCCCCceeccc---HHHHHHHHHHcCCEEEEEcchhhCCc-ccC--
Confidence 88873 2 467899999998863 3 344555889999999987 66788999999999999998752110 011
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+...+.+ +++.|.-|.+|.+ -+|++++
T Consensus 186 ------~~~~~~D-~~~~s~hK~~gp~--G~g~l~v 212 (364)
T PLN02651 186 ------VDDLGVD-LMSISGHKIYGPK--GVGALYV 212 (364)
T ss_pred ------cccCCCC-EEEechhhhCCCC--ceEEEEE
Confidence 1112223 4445667965533 4788876
No 233
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.36 E-value=8.8e-11 Score=112.44 Aligned_cols=204 Identities=10% Similarity=0.008 Sum_probs=113.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCc----CCC--CCCCCCC----CHHHHHHHHHHHhCCCCcccccCcee
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGT----ANM--EYLPMGG----SVKMVEETLKLAYGDNSEFIKDKRIA 120 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~----~~~--~Y~~~~G----~~~lr~aia~~~~~~~~~~~~~~~i~ 120 (337)
...++|+.-.|.+-...|.+.+++.+++...... ..+ +..-..| +.++++.+|+++ +.. . .
T Consensus 4 ~~~~~~~s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~-~~~-------~-~ 74 (370)
T PRK05937 4 SLSIDFVTNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH-GAP-------E-A 74 (370)
T ss_pred CceEEeECCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh-CCC-------e-E
Confidence 3578888777765555555556666665543100 011 1211122 457888899886 321 1 1
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC---CCe
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGS 197 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~ 197 (337)
++.+.|. .+...+...+.. +||.|++..=..+.-...++......+.++ ..|++.+++.++... +++
T Consensus 75 l~~~sG~-~a~~~~~~~~~~--~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 75 FIVPSGY-MANLGLCAHLSS--VTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred EEECChH-HHHHHHHHHhCC--CCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence 3445554 343333333333 566555544333333444444433333332 257888888886421 234
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc
Q 047180 198 FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG 277 (337)
Q Consensus 198 ~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 277 (337)
++++.++++|+||.+.+ +++|.++|+++++++++||+|..-..+ .+. ......+ ...+..+++.||||.||..|
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g-~~g-~g~~~~~-~~~~~~~~~~tlsK~~g~~G 218 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFG-DDG-KGFCHSL-GYENFYAVLVTYSKALGSMG 218 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccC-CCC-CchHHhh-CCCCCcEEEEechhhhhcCc
Confidence 45555899999999998 667888899999999999999742221 110 0000011 11122356789999999878
Q ss_pred cc
Q 047180 278 QR 279 (337)
Q Consensus 278 ~R 279 (337)
.+
T Consensus 219 ~~ 220 (370)
T PRK05937 219 AA 220 (370)
T ss_pred eE
Confidence 44
No 234
>PLN02624 ornithine-delta-aminotransferase
Probab=99.35 E-value=1.3e-10 Score=114.76 Aligned_cols=205 Identities=11% Similarity=0.009 Sum_probs=120.7
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhC------C-CC-eEEEcCCCCcchHH-HHHhcC
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFH------P-DS-QIYIPVPTWSNHHN-IWRDAH 165 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~------p-gd-~Vlv~~P~y~~y~~-~~~~~G 165 (337)
..+|-+.++++. + . +. ++.+++|++|...++.+...+. + ++ .|+...=+|.+... .+...|
T Consensus 119 ~~~la~~L~~~~-~-----~--~~--~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~ 188 (474)
T PLN02624 119 FPEFAEYLTSMF-G-----Y--DM--VLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSC 188 (474)
T ss_pred HHHHHHHHHhhc-C-----C--Ce--EEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCC
Confidence 345666666653 2 1 22 4678889999998886544321 1 33 57777767766532 222222
Q ss_pred ceeeEe---eeccC---CCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHH-HHHHHHHHHHhcCceeEEcccC
Q 047180 166 VTQRTF---HYYHP---GTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEE-QWKEISYQIKAKGHFPFFDMAY 238 (337)
Q Consensus 166 ~~~~~~---~~~~~---~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~-~~~~l~~~~~~~~~~ii~De~Y 238 (337)
-....- |.... -.+ -|++.+++.++..+.+...+++.+++||+|.+++.+ .+++|.++|++||+++|.||+|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~ 267 (474)
T PLN02624 189 DNEATRGFGPLLPGHLKVDF-GDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQ 267 (474)
T ss_pred CccccccCCCCCCCceEeCC-CCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccc
Confidence 110000 11000 001 167888888865434455566688999999998777 4999999999999999999999
Q ss_pred CCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHH
Q 047180 239 QGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALI 318 (337)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~ 318 (337)
.+|... ....... .....++++ +|||.+|.+++++|++++ ++++.+.+ .........+.+.+.+.+
T Consensus 268 tG~Grt---G~~~a~~-~~~i~pDiv---~lsK~lggG~~pigav~~---~~~i~~~~----~~~~~~~T~~g~pl~~aa 333 (474)
T PLN02624 268 TGLART---GKMLACD-WEEVRPDVV---ILGKALGGGVIPVSAVLA---DKDVMLCI----KPGEHGSTFGGNPLASAV 333 (474)
T ss_pred cCcCcC---cchhhHH-hcCCCCCEE---EecccccCCCCcceeeee---cHHHHhHh----ccCCcCCCCCCCHHHHHH
Confidence 887421 1111111 111123333 368999987799999986 34443333 222111222356677877
Q ss_pred HHHHhC
Q 047180 319 VSTILG 324 (337)
Q Consensus 319 ~~~~l~ 324 (337)
+...|+
T Consensus 334 a~aaLe 339 (474)
T PLN02624 334 AMAALQ 339 (474)
T ss_pred HHHHHH
Confidence 777765
No 235
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.35 E-value=1.1e-10 Score=112.96 Aligned_cols=185 Identities=14% Similarity=0.082 Sum_probs=109.4
Q ss_pred EEeeccchhHHHHHHHHHhhhC-----C-CCeEEEcCCCCcchHH-HHHhcCceeeEe---eeccC-CC-CCCChHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFH-----P-DSQIYIPVPTWSNHHN-IWRDAHVTQRTF---HYYHP-GT-KGLDFAALMD 188 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~-----p-gd~Vlv~~P~y~~y~~-~~~~~G~~~~~~---~~~~~-~~-~~~d~~~l~~ 188 (337)
++.+++|++|...++.+...+. + .+.|+..+=.|..... .+...|.....- |.... .. .-.|++.+++
T Consensus 95 ~~f~~SGseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~ 174 (397)
T TIGR03246 95 VFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKA 174 (397)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHH
Confidence 5789999999999887764331 2 3678888888887643 334343211100 00000 00 0127888888
Q ss_pred HHHcCCCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEe
Q 047180 189 DIKNAPNGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQ 267 (337)
Q Consensus 189 ~l~~~~~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (337)
.+.+ ....+++ .+.+++.|.. ++.+.+++|.++|++||+++|.||+|.+|... . .......+ .....+ .
T Consensus 175 ~l~~--~~aavi~-Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~-G--~~~a~~~~-gv~pDi---~ 244 (397)
T TIGR03246 175 LISD--KTCAVIV-EPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRT-G--ELYAYMHY-GVTPDI---L 244 (397)
T ss_pred Hhcc--CeEEEEE-ecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCcc-c--cchhhhhc-CCCCCE---E
Confidence 8752 2334444 4344445544 38999999999999999999999999888321 1 11111111 111222 3
Q ss_pred cccccccccccccceeEeeeCCHHHHHHHHHHHHhhh-cccccCCChhHHHHHHHHhC
Q 047180 268 SYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLA-RPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 268 S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~~~~~~l~ 324 (337)
+|||.+| .|+++|++++ ++++.+.+ .... ..+++ .+.+++.++...|+
T Consensus 245 t~~K~lg-gG~pigav~~---~~~i~~~~----~~~~~~~t~~-~~p~~~aaa~a~l~ 293 (397)
T TIGR03246 245 TSAKALG-GGFPIGAMLT---TTEIAAHL----KVGTHGTTYG-GNPLACAVAGKVLD 293 (397)
T ss_pred Eeehhhh-CCcceeEEEE---cHHHHHhc----cCCCcCCCCC-CCHHHHHHHHHHHH
Confidence 7899998 7999999986 34444433 2221 22343 45566777666664
No 236
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.33 E-value=4.1e-11 Score=116.80 Aligned_cols=155 Identities=18% Similarity=0.133 Sum_probs=113.7
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~~ 170 (337)
..+|++.+|++.-+.+ .+.|.+|++|+.+++..+.. +||+|+++...|+.....+ +..|++++.
T Consensus 66 ~~~le~~lA~l~g~~~----------av~~sSGt~Al~~al~~ll~--~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~ 133 (433)
T PRK08134 66 VAVLEERVAALEGGVG----------AIATASGQAALHLAIATLMG--AGSHIVASSALYGGSHNLLHYTLRRFGIETTF 133 (433)
T ss_pred HHHHHHHHHHHhCCCc----------EEEeCCHHHHHHHHHHHHhC--CCCEEEEeCCccHHHHHHHHHHHhhCCeEEEE
Confidence 4678899998763221 36799999999988876644 8999999999998654443 457888887
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++.. |++.+++.++. +.++|++ .+|+||||.+.+ +++|+++|+++++++|+|.++.--. ...
T Consensus 134 vd~~-------d~~~l~~~i~~--~TklV~~-e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~---~~~-- 195 (433)
T PRK08134 134 VKPG-------DIDGWRAAIRP--NTRLLFG-ETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPY---LLR-- 195 (433)
T ss_pred ECCC-------CHHHHHHhcCC--CCeEEEE-ECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCcccc---cCC--
Confidence 7641 78899988863 3445554 689999999987 6778899999999999999874211 100
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
++ ..+- -+++.|.+|.++-+|-.+|.+++
T Consensus 196 -pl----~~Ga-D~vv~S~tK~l~g~g~~~gG~v~ 224 (433)
T PRK08134 196 -PF----EHGA-DLVYHSATKFLGGHGTAIGGVLV 224 (433)
T ss_pred -ch----hcCC-CEEEeccccccCCCCCceEEEEE
Confidence 11 1122 36778999999988888887765
No 237
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.30 E-value=4.8e-10 Score=109.21 Aligned_cols=186 Identities=13% Similarity=0.071 Sum_probs=115.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCce-------------eeEeeeccCCCCC----CC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHVT-------------QRTFHYYHPGTKG----LD 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~~-------------~~~~~~~~~~~~~----~d 182 (337)
+..+++|++|...++.+...+....+|+...-+|.+...... ..|.. +..+|+.+. ..+ -+
T Consensus 104 ~~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ 182 (421)
T PRK06777 104 TAFFTTGAEAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNE-LHGVSVEEA 182 (421)
T ss_pred EEEeCCcHHHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcc-ccCcCHHHH
Confidence 466889999999988765543334678888888888754332 23311 111111110 111 12
Q ss_pred hHHHHHHHHc--CCCC-eEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh
Q 047180 183 FAALMDDIKN--APNG-SFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK 258 (337)
Q Consensus 183 ~~~l~~~l~~--~~~~-~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 258 (337)
++.+++.+.. .+.. ..+++ -.-++..|. +++++.+++|.++|+++|+++|+||+|.+|... ....+...+ .
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~-Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~---g~~~~~~~~-~ 257 (421)
T PRK06777 183 LSSVERLFKADIAPDQVAAILL-EPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFART---GKLFAMEYY-D 257 (421)
T ss_pred HHHHHHHHHhccCCCceEEEEE-CCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccC---Cchhhhhhc-C
Confidence 5566766652 2223 34454 445778885 689999999999999999999999999988531 111122212 1
Q ss_pred cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhc-ccccCCChhHHHHHHHHhC
Q 047180 259 DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLAR-PMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 259 ~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~~~~~~l~ 324 (337)
..++++ +|||.++ +|+|+||+++ ++++.+.+ ..... .++ +.+.++|.++..+|+
T Consensus 258 ~~pDiv---~~sK~l~-~G~pigav~~---~~~i~~~~----~~~~~~~T~-~~~p~~~aaa~a~L~ 312 (421)
T PRK06777 258 VKPDLI---TMAKSLG-GGMPISAVVG---RAEVMDAP----APGGLGGTY-AGNPLAVAAALAVLD 312 (421)
T ss_pred CCCCEE---eeehhhc-CCCceEEEEE---cHHHHhcc----CCCCCCCCC-CcCHHHHHHHHHHHH
Confidence 123433 6999999 8999999986 34444433 22222 334 457888988888886
No 238
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.27 E-value=7.9e-10 Score=108.61 Aligned_cols=188 Identities=13% Similarity=0.041 Sum_probs=109.2
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH-HhcCce-------------eeEeeeccC--CCCCCC--
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW-RDAHVT-------------QRTFHYYHP--GTKGLD-- 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~-~~~G~~-------------~~~~~~~~~--~~~~~d-- 182 (337)
+..+++|++|...++.+...+....+|+...-+|.+..... ...|.. +..+|..+. ...+..
T Consensus 118 v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (451)
T PRK06918 118 VLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEE 197 (451)
T ss_pred EEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchH
Confidence 57899999999999876554333468888888898865333 222210 122222110 001111
Q ss_pred ------hHHHHHHHHc--CCCCeEEEEeCCCCCCC-CC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHH
Q 047180 183 ------FAALMDDIKN--APNGSFFLLHACAHNPT-GV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKA 252 (337)
Q Consensus 183 ------~~~l~~~l~~--~~~~~~ili~~~p~NPT-G~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~ 252 (337)
.+.+++.+.. .+.+...+| ..|-+.+ |. +.+++.+++|.++|++||+++|+||+|.+|... ....+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~iAavi-~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~---g~~~a 273 (451)
T PRK06918 198 QYDDFMIEEFKNFFISEVAPETIAAVV-MEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFART---GKYFA 273 (451)
T ss_pred HHHHHHHHHHHHHHHhhcCCCceEEEE-ECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCcc---Cceeh
Confidence 1223333321 122334444 4577776 54 455666999999999999999999999998532 11122
Q ss_pred HHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 253 IRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 253 ~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
...+. ..++ +.||||.++ +|+|+||+++ .+++.+.+ .........+.+.++|.++..+|+
T Consensus 274 ~~~~~-v~pD---i~t~sK~l~-~G~pig~v~~---~~~i~~~~----~~~~~~~T~~g~~l~~aaa~a~l~ 333 (451)
T PRK06918 274 IEHFD-VVPD---LITVSKSLG-AGVPISGVIG---RKEIMDES----APGELGGTYAGSPLGCAAALAVLD 333 (451)
T ss_pred hHhcC-CCCC---EEeeehhhc-CCCccEEEEE---cHHHHhcc----CCCCcCcCCCcCHHHHHHHHHHHH
Confidence 22221 1123 448999999 8999999986 34444333 222222223467788888555554
No 239
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.27 E-value=1.3e-10 Score=111.01 Aligned_cols=170 Identities=19% Similarity=0.098 Sum_probs=115.2
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY 174 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~ 174 (337)
..+|-+.+++|+-.++ .+.+++|+.|+.+++.++. ..+||+|++|.-+|+.....+..+|++++.+++
T Consensus 27 ~~~fE~~~a~~~g~~~----------~~~~~sgt~Al~~al~~l~-~~~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di- 94 (363)
T PF01041_consen 27 VEEFEKEFAEYFGVKY----------AVAVSSGTSALHLALRALG-LGPGDEVIVPAYTFPATASAILWAGAEPVFVDI- 94 (363)
T ss_dssp HHHHHHHHHHHHTSSE----------EEEESSHHHHHHHHHHHTT-GGTTSEEEEESSS-THHHHHHHHTT-EEEEE-B-
T ss_pred HHHHHHHHHHHhCCCe----------EEEeCChhHHHHHHHHhcC-CCcCceEecCCCcchHHHHHHHHhccEEEEEec-
Confidence 5678899999873222 5788999999999998864 348999999999999999999999999999998
Q ss_pred cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHH
Q 047180 175 HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIR 254 (337)
Q Consensus 175 ~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 254 (337)
+++++.+|++.+++.++. ++++|++. +.-|... ++++|.++|+++|++||+|-+..--+. +. + +
T Consensus 95 ~~~~~~id~~~~~~~i~~--~t~ai~~~----h~~G~~~---d~~~i~~~~~~~~i~lIeD~a~a~g~~--~~-g----~ 158 (363)
T PF01041_consen 95 DPETLNIDPEALEKAITP--KTKAILVV----HLFGNPA---DMDAIRAIARKHGIPLIEDAAQAFGAR--YK-G----R 158 (363)
T ss_dssp ETTTSSB-HHHHHHHHHT--TEEEEEEE-----GGGB------HHHHHHHHHHTT-EEEEE-TTTTT-E--ET-T----E
T ss_pred cCCcCCcCHHHHHHHhcc--CccEEEEe----cCCCCcc---cHHHHHHHHHHcCCcEEEccccccCce--eC-C----E
Confidence 556899999999999984 33455543 4455544 688999999999999999987653221 10 0 1
Q ss_pred HhhhcCCeEEEEecc--cccccccccccceeEeeeCCHHHHHHHHH
Q 047180 255 IFLKDGHLLGLAQSY--AKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 255 ~~~~~~~~~i~~~S~--SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
..-..++ +.+.|| +|.+. +|. -|+++. .++++.++++.
T Consensus 159 ~~G~~gd--~~~fSf~~~K~i~-~ge-GG~v~~--~~~~~~~~~~~ 198 (363)
T PF01041_consen 159 PVGSFGD--IAIFSFHPTKIIT-TGE-GGAVVT--NDPELAERARA 198 (363)
T ss_dssp ETTSSSS--EEEEESSTTSSS--SSS--EEEEE--STHHHHHHHHH
T ss_pred eccCCCC--ceEecCCCCCCCc-CCC-CeeEEe--cHHHHHHHhhh
Confidence 0111233 444455 79986 465 477764 67877666653
No 240
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.27 E-value=5.9e-10 Score=108.04 Aligned_cols=186 Identities=11% Similarity=0.022 Sum_probs=117.0
Q ss_pred EEeeccchhHHHHHHHHHhhh----C--CC-CeEEEcCCCCcchHH-HHHhcCceeeE---eeeccCC--CCCCChHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H--PD-SQIYIPVPTWSNHHN-IWRDAHVTQRT---FHYYHPG--TKGLDFAALM 187 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~--pg-d~Vlv~~P~y~~y~~-~~~~~G~~~~~---~~~~~~~--~~~~d~~~l~ 187 (337)
+..+++|++|...++.+...+ . ++ .+|+...-+|.+... .+...|..... .|+...- -.-.|++.++
T Consensus 101 v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 180 (408)
T PRK04612 101 VFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALE 180 (408)
T ss_pred EEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHH
Confidence 578999999999888665433 1 12 468999999988653 33333322111 0110000 0112678888
Q ss_pred HHHHcCCCCeEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE
Q 047180 188 DDIKNAPNGSFFLLHACAHNPTGVDPS--EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL 265 (337)
Q Consensus 188 ~~l~~~~~~~~ili~~~p~NPTG~~~s--~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (337)
+.+.. .....++ ..|.+++|.+++ ++.+++|.++|+++++++|+||+|.+|... .. ..... .......
T Consensus 181 ~~~~~--~~~aavi-~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~----G~-~~a~~--~~~~~pd 250 (408)
T PRK04612 181 AAMAG--GDVAAVM-LEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRT----GT-LFAHW--QEQVTPD 250 (408)
T ss_pred HhhCC--CCEEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC----Cc-hhhhh--hcCCCCC
Confidence 77742 2334444 468899998877 678999999999999999999999987431 11 11111 1123556
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+.+|||.++ +|+|+|++++ .+++.+.+.. .....+++ .+.+++.++..+|+
T Consensus 251 i~t~~K~l~-~G~piga~~~---~~~~~~~~~~---~~~~~t~~-~~p~~~aaa~a~L~ 301 (408)
T PRK04612 251 IVTLAKALG-GGFPIGAMLA---GPKVAETMQF---GAHGTTFG-GNPLAAAVARVALR 301 (408)
T ss_pred EEEEcchhc-CCCceEEEEE---CHHHHhhhcC---CCcCCCCC-CCHHHHHHHHHHHH
Confidence 789999999 8999999875 3444443322 11223444 46778888877775
No 241
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.26 E-value=1.7e-10 Score=112.40 Aligned_cols=156 Identities=16% Similarity=0.078 Sum_probs=108.9
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----HHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----WRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~~~~G~~~~~ 170 (337)
...|.+.++++.-.. ..+.+.+|+.|+.+++..+.. +||+|+++...|...... ++..|.+++.
T Consensus 71 ~~~Le~~lA~l~g~~----------~av~~sSG~aAi~~al~all~--~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~ 138 (436)
T PRK07812 71 QDVVEQRIAALEGGV----------AALLLASGQAAETFAILNLAG--AGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSF 138 (436)
T ss_pred HHHHHHHHHHHhCCC----------eEEEEccHHHHHHHHHHHHhC--CCCEEEEeCCcchHHHHHHHHHhhcCeEEEEE
Confidence 356888888875221 136788889999888876655 899999999888775433 3446777766
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++ +. .|++.+++++. ++.++ |+..+|+||||.+.+ +++|+++|+++++++|+|+++..-. ..
T Consensus 139 vd--d~----~d~e~l~~ai~--~~tkl-V~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~---~~--- 200 (436)
T PRK07812 139 VE--DP----DDLDAWRAAVR--PNTKA-FFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPY---LI--- 200 (436)
T ss_pred EC--CC----CCHHHHHHhCC--CCCeE-EEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccc---cC---
Confidence 63 11 37888888775 23344 445789999999987 5677888999999999999864311 10
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
..+ ..+.+ +++.|++|.+|-.|--+|.+++
T Consensus 201 ---~pl-~~GaD-ivv~S~tK~lgg~G~~i~G~vv 230 (436)
T PRK07812 201 ---RPL-EHGAD-IVVHSATKYLGGHGTAIAGVIV 230 (436)
T ss_pred ---Cch-hcCCC-EEEEecccccCCCCCeEEEEEE
Confidence 111 12333 5559999999877777888776
No 242
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.26 E-value=1.5e-09 Score=105.64 Aligned_cols=187 Identities=12% Similarity=0.001 Sum_probs=108.8
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH-HHhcCc-------------eeeEeeeccCCCC-----CC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI-WRDAHV-------------TQRTFHYYHPGTK-----GL 181 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~-~~~~G~-------------~~~~~~~~~~~~~-----~~ 181 (337)
+..+++|++|...++.+........+|+...-+|.+.... +...|. .+..+|..+.... ..
T Consensus 97 v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (420)
T TIGR00700 97 SVFFNSGAEAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQL 176 (420)
T ss_pred EEEeCCcHHHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccch
Confidence 5678899999999987655443346788889889886532 222221 1112222100000 01
Q ss_pred ----ChHHHHHHHH--cCCCCe-EEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 182 ----DFAALMDDIK--NAPNGS-FFLLHACAHNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 182 ----d~~~l~~~l~--~~~~~~-~ili~~~p~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
+++.+++.+. ..++.. .+++=| -+.=+|.++ +++.+++|.++|++||+++|+||+|.+|... ....+.
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~iAavi~Ep-i~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~---g~~~a~ 252 (420)
T TIGR00700 177 STDGELAAARAIFVIDVGANNVAALVIEP-VQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFART---GAMFAC 252 (420)
T ss_pred hHHHHHHHHHHHHHhhcCCCcEEEEEECC-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCccc---chhHHH
Confidence 1445665553 122333 344433 344567765 5555999999999999999999999998532 111111
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHh
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTIL 323 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l 323 (337)
..+ ...+. +.+|||.++ +|||+||+++ ++++.+.+.. .....++ +.+.++|.++.++|
T Consensus 253 ~~~-~~~pD---i~~lsK~l~-~G~pig~v~~---~~~i~~~~~~---~~~~~T~-~~~pl~~aaa~a~l 310 (420)
T TIGR00700 253 EHE-GPEPD---LITTAKSLA-DGLPLSGVTG---RAEIMDAPAP---GGLGGTY-AGNPLACAAALAVL 310 (420)
T ss_pred hhc-CCCCC---EEEeecccc-CCcceEEEEe---cHHHHhhcCC---CCcCCCC-CcCHHHHHHHHHHH
Confidence 111 11123 345999999 8999999986 3444443321 1122334 45678888885555
No 243
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.25 E-value=5.8e-10 Score=107.45 Aligned_cols=204 Identities=17% Similarity=0.156 Sum_probs=133.9
Q ss_pred hHHHHH-HHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEc
Q 047180 72 ECVREA-ERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIP 150 (337)
Q Consensus 72 ~~v~~a-~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~ 150 (337)
.+++++ ...+..+.. .|..+....+|.+++++++ |.. . ++.|++|+.|+.++..+..+ |||+| +
T Consensus 50 ~aMs~~q~a~~~~GDe-~yag~~s~~~lE~~va~~~-G~~-------~--av~v~sGT~Al~ll~~l~l~--pGDeV--p 114 (450)
T TIGR02618 50 NAMSDKQWAGLMMGDE-AYAGSRNFYHLERTVRELY-GFK-------Y--VVPTHQGRGAENLLSQIAIK--PGDYV--P 114 (450)
T ss_pred HHHHHHHHHHhhhcch-hhcCCCcHHHHHHHHHHHH-CCC-------e--EEEcCCHHHHHHHHHHhCCC--CcCEE--C
Confidence 556665 333321212 4877777889999999986 432 1 57899999999887654444 99987 7
Q ss_pred CCCC-cchHHHHHhcCceeeEeeec--------cCCCCCCChHHHHHHHHcCC--CCeEEEEeCCCCC-CCCCCCCHHHH
Q 047180 151 VPTW-SNHHNIWRDAHVTQRTFHYY--------HPGTKGLDFAALMDDIKNAP--NGSFFLLHACAHN-PTGVDPSEEQW 218 (337)
Q Consensus 151 ~P~y-~~y~~~~~~~G~~~~~~~~~--------~~~~~~~d~~~l~~~l~~~~--~~~~ili~~~p~N-PTG~~~s~~~~ 218 (337)
+|+| ..+...++..|+.++.++.. ++.++.+|++++++.++... ..+.+.+ .+++| ..|.++|.+++
T Consensus 115 sn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~-e~t~N~~GG~pvs~~~l 193 (450)
T TIGR02618 115 GNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICL-AVTVNLAGGQPVSMANM 193 (450)
T ss_pred CceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEE-EEecccCCCeeCCHHHH
Confidence 7888 44455578899987777542 13357789999999987421 1122333 44677 56899999999
Q ss_pred HHHHHHHHhcCceeEEcccCCC----CC---CCCCccchHHH----HHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 219 KEISYQIKAKGHFPFFDMAYQG----FA---SGDPERDAKAI----RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 219 ~~l~~~~~~~~~~ii~De~Y~~----~~---~~~~~~~~~~~----~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
+++.++|+++|+.|++|-+..- |. .+.+ .+ .++ +.+.+..+ . +..|..|.++.+ +|=+++ +
T Consensus 194 ~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~-~~-~~i~ei~~e~~~~aD-~-~~~S~~Kd~~~~---~GG~l~-~ 265 (450)
T TIGR02618 194 REVRELCEAHGIKVFYDATRCVENAYFIKEREQGY-ED-KSIAEILKEMMSYAD-G-CTMSGKKDCLVN---IGGFLC-M 265 (450)
T ss_pred HHHHHHHHHcCCEEEEEccchhhChhhhhcccccc-cC-CCHHHHHHHHhccCc-E-EEEeeccCCCCC---CceEEE-e
Confidence 9999999999999999986532 11 0001 11 122 22222222 3 667888988754 455554 3
Q ss_pred CCHHHHHHHHHH
Q 047180 288 EDEKQAVAVKSQ 299 (337)
Q Consensus 288 ~~~~~~~~~~~~ 299 (337)
+++++.++++..
T Consensus 266 ~d~~l~~k~r~~ 277 (450)
T TIGR02618 266 NDDEMFQSAKEL 277 (450)
T ss_pred CCHHHHHHHHHH
Confidence 788888887664
No 244
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.24 E-value=8.2e-10 Score=104.49 Aligned_cols=170 Identities=19% Similarity=0.097 Sum_probs=122.3
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY 174 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~ 174 (337)
..+|-+++++|+--++ .+.++.|+.|+.+++.+|. ..|||+|++|+-+|..-...+-..|+++|.+.+
T Consensus 36 v~~FE~~~ae~~G~k~----------ava~~sgT~AL~laL~al~-ig~GDeVI~ps~TfvATan~i~~~Ga~PVFvDi- 103 (374)
T COG0399 36 VRRFEQAFAEYLGVKY----------AVAVSSGTAALHLALLALA-IGPGDEVIVPSFTFVATANAVLLVGAKPVFVDI- 103 (374)
T ss_pred HHHHHHHHHHHhCCCe----------EEEecChHHHHHHHHHhcC-CCCCCEEEecCCchHHHHHHHHHcCCeEEEEec-
Confidence 4678999999873222 4678999999999998776 569999999999999999999999999999998
Q ss_pred cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHH
Q 047180 175 HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIR 254 (337)
Q Consensus 175 ~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~ 254 (337)
+++++.+|++.++++++.. .+.|+..-- -|... ++++|.++|++||++||+|-+.. +... +. +. .+-
T Consensus 104 d~~T~nid~~~ie~aIt~~--tKAIipVhl----~G~~~---dm~~i~~la~~~~l~vIEDaAqa-~Ga~-y~-gk-~vG 170 (374)
T COG0399 104 DPDTLNIDPDLIEAAITPR--TKAIIPVHL----AGQPC---DMDAIMALAKRHGLPVIEDAAQA-HGAT-YK-GK-KVG 170 (374)
T ss_pred CCcccCCCHHHHHHHcccC--CeEEEEehh----ccCCC---CHHHHHHHHHHcCCeEEEEcchh-ccCe-ec-Cc-ccc
Confidence 5567999999999999842 344444333 34443 57788899999999999998753 2110 10 00 011
Q ss_pred HhhhcCCeEEEEecc--cccccccccccceeEeeeCCHHHHHHHHH
Q 047180 255 IFLKDGHLLGLAQSY--AKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 255 ~~~~~~~~~i~~~S~--SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
..+ .+-+-|| +|.+. +| -=|.++ +.|+++.++++.
T Consensus 171 ---t~G--d~~~fSF~~~K~it-tg-EGGav~--tnd~ela~k~~~ 207 (374)
T COG0399 171 ---SFG--DIGAFSFHATKNLT-TG-EGGAVV--TNDEELAEKARS 207 (374)
T ss_pred ---ccc--ceEEEEecCCCCcc-cc-CceEEE--eCCHHHHHHHHH
Confidence 112 2334455 89998 56 457665 478887777654
No 245
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.23 E-value=1.8e-09 Score=105.26 Aligned_cols=174 Identities=13% Similarity=0.051 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh------------hhCCCCeEEEcCCCCcchHHHHHh
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK------------RFHPDSQIYIPVPTWSNHHNIWRD 163 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~------------~~~pgd~Vlv~~P~y~~y~~~~~~ 163 (337)
.+|-+.+|+|+ +.. + .++.+.|-.|-..++.+|. ....+|.|+.-.-.......-++.
T Consensus 150 ~~LE~~LA~f~-g~e------~---all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~l 219 (476)
T PLN02955 150 RLLESSLADLK-KKE------D---CLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRL 219 (476)
T ss_pred HHHHHHHHHHH-CCC------c---EEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHh
Confidence 66888899987 321 1 2445555444333333331 001344555544444444455555
Q ss_pred c----CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC
Q 047180 164 A----HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 164 ~----G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
. |++++.|+- -|++.|++.+...+....+|+.-.--+++|.+.+ +++|.++|++++.++|+||+|.
T Consensus 220 s~~~~~a~~~~f~H-------ND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~ 289 (476)
T PLN02955 220 AERQGNVEVFVYRH-------CDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHG 289 (476)
T ss_pred ccccCCceEEEeCC-------CCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEccccc
Confidence 5 455555432 3788898888765443445554556899999988 6677788889999999999998
Q ss_pred CCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHH
Q 047180 240 GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
.++.|.. .......+.-..+..++++||||.||. +-||+++ +.+.++.++
T Consensus 290 ~Gv~G~~--G~G~~e~~g~~~di~ii~~TLsKA~G~---~GGfi~g---s~~~~~~l~ 339 (476)
T PLN02955 290 TFVCGEN--GGGVAEEFNCEADVDLCVGTLSKAAGC---HGGFIAC---SKKWKQLIQ 339 (476)
T ss_pred CceecCC--CCcHHHHhCCCCCCcEEEEeCccchhc---cCceeec---HHHHHHHHH
Confidence 7776521 111122222123567889999999875 4588764 455544443
No 246
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.22 E-value=1.2e-09 Score=106.58 Aligned_cols=185 Identities=12% Similarity=0.049 Sum_probs=113.6
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCc-------------eeeEeeeccCCCCCCC----
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHV-------------TQRTFHYYHPGTKGLD---- 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~-------------~~~~~~~~~~~~~~~d---- 182 (337)
++.+++|++|...++.+........+|+...-+|.+...... ..|. .++.+|+.+. ..+.+
T Consensus 104 v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~ 182 (425)
T PRK07495 104 TIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVE-LHGVSVEQS 182 (425)
T ss_pred EEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcc-cccccHHHH
Confidence 578999999999988765543334688888888888653221 1221 1222332111 12232
Q ss_pred hHHHHHHHHc---CCCCeEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh
Q 047180 183 FAALMDDIKN---APNGSFFLLHACAHNPTG-VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK 258 (337)
Q Consensus 183 ~~~l~~~l~~---~~~~~~ili~~~p~NPTG-~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 258 (337)
++.+++.+.. ..+...+++-|..+| +| .+++++.+++|.++|+++|+++|+||+|.+|... . .... +..
T Consensus 183 ~~~l~~~~~~~~~~~~iaavi~EPv~g~-~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~-G--~~~a---~~~ 255 (425)
T PRK07495 183 LAALDKLFKADVDPQRVAAIIIEPVQGE-GGFYPAPAAFMKALRELCDQHGILLIADEVQTGFART-G--KLFA---MEH 255 (425)
T ss_pred HHHHHHHHHhccCCCceEEEEECCccCC-CCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcC-C--Ccee---ecc
Confidence 3444665542 123356777788888 88 5689999999999999999999999999987421 1 1101 111
Q ss_pred cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhh-hcccccCCChhHHHHHHHHh
Q 047180 259 DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQL-ARPMYSNPPVHGALIVSTIL 323 (337)
Q Consensus 259 ~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~~~~~~l 323 (337)
...+.-+.+|||.++ .|+|+|++++ +.++.+.+ ... ...++ +.+.+++.++..+|
T Consensus 256 -~gv~pDi~tlsK~l~-~G~pigav~~---~~~i~~~~----~~~~~~~T~-~~~pl~~aaa~a~l 311 (425)
T PRK07495 256 -HEVAADLTTMAKGLA-GGFPLAAVTG---RAEIMDAP----GPGGLGGTY-GGNPLGIAAAHAVL 311 (425)
T ss_pred -cCCCCCEEeehhhhc-CCccceEEEE---cHHHHhcc----CCCCcCCCC-CCCHHHHHHHHHHH
Confidence 122334688999999 7999999986 34443333 221 12344 35667777444443
No 247
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.18 E-value=1.6e-10 Score=96.54 Aligned_cols=116 Identities=13% Similarity=0.179 Sum_probs=77.8
Q ss_pred CCCCCchhhHHHHHhcC-----CCC-CeeEeeeeeeec----------CC--CCcccchHHHHHHHHhcCcCCCCCCCCC
Q 047180 32 PAAKDPILGVTEAFLAD-----PSP-DKVNVGVGAYRD----------DN--GKPVVLECVREAERRIAGTANMEYLPMG 93 (337)
Q Consensus 32 ~~~~~~~~~~~~~~~~~-----~~~-~~i~l~~G~~~~----------~~--~~~~~~~~v~~a~~~~~~~~~~~Y~~~~ 93 (337)
....++.+..-+.+.++ .++ .+|+|+..+... ++ ++..+++.+.++...+ ..|.+..
T Consensus 18 ~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~-----a~Y~~~~ 92 (153)
T PLN02994 18 HGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI-----ALFQDYH 92 (153)
T ss_pred CCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH-----hcCCCCC
Confidence 34445555555555554 333 489988875310 00 1112222333332221 3488899
Q ss_pred CCHHHHHHHHHHHhCCCC--cccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc
Q 047180 94 GSVKMVEETLKLAYGDNS--EFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSN 156 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~--~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~ 156 (337)
|.++||+++|+|+.++.+ ..+++++ +++|.|+++++.+++.++.+ |||.|+|++|+|+.
T Consensus 93 G~~~lR~AiA~~l~~~~g~~v~~~pd~--Ivvt~Ga~~al~~l~~~l~d--pGD~VlVp~P~Y~~ 153 (153)
T PLN02994 93 GLANFRKAIANFMAEARGGRVKFDADM--IVLSAGATAANEIIMFCIAD--PGDAFLVPTPYYAA 153 (153)
T ss_pred CcHHHHHHHHHHHHHHhCCCCccchhh--eEEcCCHHHHHHHHHHHHcC--CCCEEEEeCCCCCC
Confidence 999999999999966544 3456665 58999999999999999887 99999999999974
No 248
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.16 E-value=7.1e-10 Score=102.39 Aligned_cols=207 Identities=16% Similarity=0.032 Sum_probs=134.1
Q ss_pred cchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEE
Q 047180 70 VLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYI 149 (337)
Q Consensus 70 ~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv 149 (337)
+.|.+.+++.+...+.. .|+......+|.+.+++.+ +.. . .+.+++|+.+-.+++.++.+ |++.|++
T Consensus 7 ~~~~m~~a~~~a~~gd~-~Yg~D~~~~~l~~~i~~l~-g~e-------~--a~f~~sGT~An~~al~~~~~--~~~~vi~ 73 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGDD-AYGEDPTTARLEERIAELF-GKE-------A--ALFVPSGTMANQLALRAHLR--PGESVIC 73 (290)
T ss_dssp S-HHEEHHHHHTTSB-C-CTTSSHHHHHHHHHHHHHH-TSS-------E--EEEESSHHHHHHHHHHHHHH--TTEEEEE
T ss_pred CCHHHHHHHHccccCCc-ccCCChhHHHHHHHHHHHc-CCC-------E--EEEeCCCChHHHHHHHHHHh--cCCceec
Confidence 45667777755533333 5887767788999999875 432 1 35788899998888887777 9999999
Q ss_pred cCCCCcch---HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEeCCCCCCC-CCCCCHHHHHHHH
Q 047180 150 PVPTWSNH---HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLHACAHNPT-GVDPSEEQWKEIS 222 (337)
Q Consensus 150 ~~P~y~~y---~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~~~p~NPT-G~~~s~~~~~~l~ 222 (337)
..++.... .......|.++++++..+ +..+|++++++.+... ..+..+|.+.+|+|-. |.++|.+++++|.
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~~~~~l~~~~--~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~ 151 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGAKLIPLPSDD--DGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAIS 151 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTCEEEEEBECT--GTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHH
T ss_pred cccceeeeeccchhhHhcCcEEEECCCcc--cCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHH
Confidence 99854422 233467999999987632 2679999999988762 2345566668899985 8899999999999
Q ss_pred HHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHH
Q 047180 223 YQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQ 301 (337)
Q Consensus 223 ~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~ 301 (337)
++|++|++.+..|=+-..-.. .....+++.+.. .-.++++ |+||..+++ .|-+++ .+++.+++.....+
T Consensus 152 ~~a~~~gl~lhmDGARl~~a~---~~~~~~~~e~~~-~~D~v~~-~~tK~~g~~---~Gavl~--~~~~~i~~~~~~~k 220 (290)
T PF01212_consen 152 ELAREHGLPLHMDGARLANAA---AALGVSLAEIAA-GADSVSF-GGTKNGGAP---GGAVLA--GNKEFIAKARRQRK 220 (290)
T ss_dssp HHHHHHT-EEEEEETTHHHHH---CHHHHHHHHHHT-TSSEEEE-ETTSTT-SS---SEEEEE--ESHHHHHHHHHHHH
T ss_pred HHHHhCceEEEEehhhHHHhh---hcccccHHHHhh-hCCEEEE-EEEcccccc---cceEEE--echHHHHHHHHHHH
Confidence 999999999999976321110 000112333332 2345554 799999875 566665 46665554444333
No 249
>PRK04311 selenocysteine synthase; Provisional
Probab=99.14 E-value=5.5e-09 Score=102.47 Aligned_cols=218 Identities=17% Similarity=0.165 Sum_probs=131.8
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCC---CC--CHHHHHHHHHHHhCCCCcccccCceeEEee
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPM---GG--SVKMVEETLKLAYGDNSEFIKDKRIAAVQS 124 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~---~G--~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 124 (337)
...||.+.-.+.+.-+....++.+.+++.+. .......|.-. .| +..+++.++++. +. +. .+++
T Consensus 79 r~vinatg~v~~tNlg~s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~-Ga-------e~--a~vv 148 (464)
T PRK04311 79 RPVINATGVVLHTNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT-GA-------ED--ALVV 148 (464)
T ss_pred cceecCCccEEeccCCCCCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh-CC-------Ce--EEEE
Confidence 3578766444544445556677787777654 22112223211 12 246778888765 32 11 3577
Q ss_pred ccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc------hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeE
Q 047180 125 LSGTGACRLFADFQKRFHPDSQIYIPVPTWSN------HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 125 ~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~------y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
++++.|+.+++..+. +||+|++++-.+.. ....++..|++++.+... ...+++++++++.+ +.++
T Consensus 149 ~sgtaAl~l~l~~l~---~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~----~~t~~~dle~aI~~--~Tkl 219 (464)
T PRK04311 149 NNNAAAVLLALNALA---AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTT----NRTHLRDYEQAINE--NTAL 219 (464)
T ss_pred CCHHHHHHHHHHHhC---CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCC----CCCCHHHHHHhcCc--cCeE
Confidence 888899988776653 89999998764331 123567789999888652 23568888888863 3344
Q ss_pred EEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC----CCCCccchHHHHHhhhcCCeEEEEeccccc
Q 047180 199 FLLHACAHNPT--GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA----SGDPERDAKAIRIFLKDGHLLGLAQSYAKN 272 (337)
Q Consensus 199 ili~~~p~NPT--G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 272 (337)
++ ..+++||+ |.. ..-.+++|+++|++||+++|+|...+-+. ++-..+. .+......+. -+++.|..|.
T Consensus 220 V~-~vh~sN~~i~G~~-~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p--~~~~~l~~Ga-Div~fSg~K~ 294 (464)
T PRK04311 220 LL-KVHTSNYRIEGFT-KEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEP--TVQELLAAGV-DLVTFSGDKL 294 (464)
T ss_pred EE-EEcCCCccccccC-CcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCC--chhhHHhcCC-cEEEecCccc
Confidence 44 47899994 532 12358889999999999999999543221 1100010 1111112232 3677899999
Q ss_pred ccccccccceeEeeeCCHHHHHHHH
Q 047180 273 MGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 273 ~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
+|-| ..|++++ +++.+++++
T Consensus 295 LgGp--~~G~i~g---~~~li~~l~ 314 (464)
T PRK04311 295 LGGP--QAGIIVG---KKELIARLK 314 (464)
T ss_pred ccCC--ceEEEEE---cHHHHHHHh
Confidence 8733 5898875 566666554
No 250
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.07 E-value=7.8e-09 Score=99.83 Aligned_cols=164 Identities=22% Similarity=0.147 Sum_probs=116.9
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh-hCCCCeEEEcCCCCcchH----HHHHhcCceee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR-FHPDSQIYIPVPTWSNHH----NIWRDAHVTQR 169 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~-~~pgd~Vlv~~P~y~~y~----~~~~~~G~~~~ 169 (337)
+++.|+.+++++-... .+ +++.|.|+|+++.+++..+.. +.+||+|++..=-++.-. ...+..|++++
T Consensus 68 ~e~aRe~va~~~~a~~-----~~--eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~ 140 (405)
T COG0520 68 YEAAREAVARFLNADS-----SD--EIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVR 140 (405)
T ss_pred HHHHHHHHHHHhCCCC-----CC--eEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEE
Confidence 4678889999873221 12 368999999999999987753 338999999987776543 44556799999
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.+|+. ++..++.+.++..+. +++.++.++.=+|-||.+.+ +++|+++|++++.++++|-+.. ...... +
T Consensus 141 ~i~~~--~~g~~~~~~~~~~i~---~~Tklvais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~-~~h~~i--d 209 (405)
T COG0520 141 VIPLD--DDGLLDLDALEKLIT---PKTKLVALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQA-AGHLPI--D 209 (405)
T ss_pred EEecC--CCCCcCHHHHHHhcC---CCceEEEEECccccccccch---HHHHHHHHHHcCCEEEEECccc-cCccCC--C
Confidence 99984 367899999998665 33445555889999999987 7789999999999999997632 211111 1
Q ss_pred hHHHHHhhhcCCeEEEEecccc-cccccccccceeEe
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAK-NMGLYGQRVGCLSV 285 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK-~~~~~G~RvG~~~~ 285 (337)
+...+.. +++.|-=| .+|..| +|.+.+
T Consensus 210 ------v~~l~~D-f~afsgHKwl~gP~G--iGvLy~ 237 (405)
T COG0520 210 ------VQELGCD-FLAFSGHKWLLGPTG--IGVLYV 237 (405)
T ss_pred ------chhcCCC-EEEEcccccccCCCc--eEEEEE
Confidence 1122223 44556679 777656 788876
No 251
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.07 E-value=4.9e-09 Score=102.29 Aligned_cols=156 Identities=13% Similarity=0.023 Sum_probs=108.0
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH----HHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH----NIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~----~~~~~~G~~~~~ 170 (337)
...|++.++++.-.. ..+.+.+|+.|+.+++..+.. +||+|++++..|+... ..++..|++++.
T Consensus 71 ~~~le~~la~l~g~~----------~~v~fsSG~~Ai~~al~~ll~--~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~ 138 (437)
T PRK05613 71 VEALENRIASLEGGV----------HAVAFASGQAAETAAILNLAG--AGDHIVTSPRLYGGTETLFLVTLNRLGIEVTF 138 (437)
T ss_pred HHHHHHHHHHHhCCC----------eEEEeCCHHHHHHHHHHHhcC--CCCEEEECCCccHHHHHHHHHHHHhcCeEEEE
Confidence 356778888875221 135677777888776655544 8999999999999764 345678988887
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++ +. .|++.+++++.+ +.+++++ .+|.||+|.+.+ +++|+++|+++|+++|+|.+...-. ..
T Consensus 139 vd--~~----~d~e~l~~~l~~--~tk~V~~-e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~---~~--- 200 (437)
T PRK05613 139 VE--NP----DDPESWQAAVQP--NTKAFFG-ETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAA---LV--- 200 (437)
T ss_pred EC--CC----CCHHHHHHhCCc--cCeEEEE-ECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCcccc---cc---
Confidence 75 11 278899888863 3344544 679999998776 6678888999999999999864311 10
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
.++ ..+- =+++.|++|.++-.|.-+|-+++
T Consensus 201 ~p~----~~Ga-Divv~S~~K~l~G~gd~~gG~vv 230 (437)
T PRK05613 201 RPL----ELGA-DVVVASLTKFYTGNGSGLGGVLI 230 (437)
T ss_pred ChH----HhCC-CEEEeeccceecCCCcceeEEEE
Confidence 111 1122 36677889999876776676665
No 252
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.06 E-value=3.1e-08 Score=97.08 Aligned_cols=186 Identities=12% Similarity=0.017 Sum_probs=113.5
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCc------------eeeEeeeccCCCCCC------
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHV------------TQRTFHYYHPGTKGL------ 181 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~------------~~~~~~~~~~~~~~~------ 181 (337)
.+.+++|++|...++.+...+....+|+...-+|.+...... ..|. .+..+|+.+ .+..
T Consensus 105 ~f~~~sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 182 (442)
T TIGR00709 105 QFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPH--EYRCPFGIGG 182 (442)
T ss_pred EEeCCCHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCc--cccccccCCc
Confidence 355689999999998776554334689999999998764433 2321 122222211 1111
Q ss_pred --Ch----HHHHHHHHc---C-CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchH
Q 047180 182 --DF----AALMDDIKN---A-PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 182 --d~----~~l~~~l~~---~-~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
+. +.+++.+.. . .+...+++-|.++|+...+++++.+++|.++|++||+++|.||+|.+|... ....
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRt---G~~~ 259 (442)
T TIGR00709 183 EAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRS---GTMF 259 (442)
T ss_pred hhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCC---Cchh
Confidence 11 112333321 1 233556666777777667799999999999999999999999999998521 1112
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
....+ ...+++++ |||.++. |+++|++++ +++ .+.+. ......+++ .+.+++.++..+|+
T Consensus 260 a~~~~-gv~PDiv~---~gK~l~~-G~Pigav~~---~~~-~~~~~---~~~~~~T~~-gnpla~aaa~a~L~ 319 (442)
T TIGR00709 260 AFEHA-GIEPDFVV---MSKAVGG-GLPLAVLLI---APE-FDAWQ---PAGHTGTFR-GNQLAMVTGTEALN 319 (442)
T ss_pred HHHHc-CCCCcEEE---EcccccC-CcccEEEEE---chH-HhccC---CCcCCCCCC-cCHHHHHHHHHHHH
Confidence 22222 22244554 7999996 999999986 233 23321 111223443 56778888877775
No 253
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.06 E-value=3.8e-08 Score=96.50 Aligned_cols=231 Identities=13% Similarity=-0.027 Sum_probs=125.7
Q ss_pred chHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEE
Q 047180 71 LECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYI 149 (337)
Q Consensus 71 ~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv 149 (337)
.|.|.+|+++ +... ..+....+..+.+..+++.+.... +....++ ++.+++|++|...++.+...+...++|+.
T Consensus 74 ~p~v~~ai~~q~~~~--~~~~~~~~~~~~~~~la~~l~~~~-p~~~~~~--v~f~~sGseA~e~AlklAr~~tgr~~ii~ 148 (443)
T PRK06058 74 APRVVEAVREQVARF--THTCFMVTPYEGYVAVAEQLNRLT-PGDHEKR--SALFNSGAEAVENAVKIARSYTGRQAVVV 148 (443)
T ss_pred CHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhC-CCCCCCE--EEEeCCcHHHHHHHHHHHHHhhCCCeEEE
Confidence 4556666544 3221 112222223345555666654332 1000123 46788889999988875544333479999
Q ss_pred cCCCCcchHHHHH-hcCc-------------eeeEeeeccCCCC----CCC--------hHHHHHHHHcCCCCeEEEEeC
Q 047180 150 PVPTWSNHHNIWR-DAHV-------------TQRTFHYYHPGTK----GLD--------FAALMDDIKNAPNGSFFLLHA 203 (337)
Q Consensus 150 ~~P~y~~y~~~~~-~~G~-------------~~~~~~~~~~~~~----~~d--------~~~l~~~l~~~~~~~~ili~~ 203 (337)
..++|.++..... ..|. .+..+|+....+. ..+ ++.+++.+. +.+...++ .
T Consensus 149 ~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~iAavi-~ 225 (443)
T PRK06058 149 FDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVG--ADNLAAVI-I 225 (443)
T ss_pred ECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhC--CCceEEEE-E
Confidence 9999999864332 2221 1122221110000 011 111222221 22334444 4
Q ss_pred CCCCCCCCC--CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccc
Q 047180 204 CAHNPTGVD--PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVG 281 (337)
Q Consensus 204 ~p~NPTG~~--~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 281 (337)
.|-+++|-+ .+++.+++|.++|++||+++|.||++.+|..- ........+ ...+++++ ++|.+| .|+++|
T Consensus 226 EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRt---G~~fa~~~~-gv~PDiv~---~gK~l~-~G~Pi~ 297 (443)
T PRK06058 226 EPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFART---GAWFACEHE-GIVPDLIT---TAKGIA-GGLPLS 297 (443)
T ss_pred CCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---hhhhHHHhc-CCCCCEEE---Eccccc-CCCccE
Confidence 678887644 46899999999999999999999999988421 111111111 11234443 489999 899999
Q ss_pred eeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 282 CLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
++++ .+++.+.+.. .....++ +.+.+++.++...|+
T Consensus 298 av~~---~~~i~~~~~~---~~~~~T~-~gnpl~~aaa~a~L~ 333 (443)
T PRK06058 298 AVTG---RAEIMDAPHP---GGLGGTY-GGNPVACAAALAAIE 333 (443)
T ss_pred EEEE---cHHHHhhccC---CCCCCCC-CCCHHHHHHHHHHHH
Confidence 9886 4444443321 1112334 356778888777765
No 254
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.05 E-value=2.6e-08 Score=97.46 Aligned_cols=214 Identities=15% Similarity=0.118 Sum_probs=125.5
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCC---CC--CHHHHHHHHHHHhCCCCcccccCceeEEeec
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPM---GG--SVKMVEETLKLAYGDNSEFIKDKRIAAVQSL 125 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~---~G--~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 125 (337)
..||.+.-.+.+.-+..+.++.+.++..+. .......|.-. .| +..+++.++++. +.. + .++++
T Consensus 75 ~vinatg~v~~tNlg~s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~-gae------~---alvv~ 144 (454)
T TIGR00474 75 RVINATGVVLHTNLGRAPLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT-GAE------D---ALVVN 144 (454)
T ss_pred ceeCCCCcEEeccCCCCCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh-CCC------c---EEEEC
Confidence 456644323443334455567777777553 22112223211 12 256788888875 321 1 24577
Q ss_pred cchhHHHHHHHHHhhhCCCCeEEEcCCCCcch------HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 126 SGTGACRLFADFQKRFHPDSQIYIPVPTWSNH------HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y------~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
+++.|+.+++..+. +||+|++++-.+..| ...++..|++++.++.. ...+++++++++.. +++++
T Consensus 145 sg~aAi~l~l~~l~---~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~----~~~~l~dle~aI~~--~T~lv 215 (454)
T TIGR00474 145 NNAAAVLLALNTLA---KGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTT----NRTHLKDYEDAITE--NTALL 215 (454)
T ss_pred CHHHHHHHHHHHhC---CcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCC----CCCCHHHHHHhcCc--CCEEE
Confidence 78888887776543 899999998765433 23567789999888652 23578889888752 33444
Q ss_pred EEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCC----CCCccchHHHHHhhhcCCeEEEEecccccc
Q 047180 200 LLHACAHNPT--GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFAS----GDPERDAKAIRIFLKDGHLLGLAQSYAKNM 273 (337)
Q Consensus 200 li~~~p~NPT--G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~----~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 273 (337)
++ .+++||+ |.. ....+++|+++|+++|+.+++|....-+.. +-..+ +.+......+-. +++.|..|.+
T Consensus 216 ~~-~h~sN~~~~G~~-~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~--p~~~~~~~~GaD-iv~fSg~K~L 290 (454)
T TIGR00474 216 LK-VHTSNYRIVGFT-EEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDE--PTVQEVIAAGVD-LVTFSGDKLL 290 (454)
T ss_pred EE-EccCcccccCCC-CCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCC--cccccHhHcCCC-EEEecCcccc
Confidence 44 6789996 631 112477899999999999999976332210 00000 001111122323 6778889998
Q ss_pred cccccccceeEeeeCCHHHHH
Q 047180 274 GLYGQRVGCLSVLCEDEKQAV 294 (337)
Q Consensus 274 ~~~G~RvG~~~~~~~~~~~~~ 294 (337)
|-| ..|++++ ..+.++
T Consensus 291 gGp--~~G~i~g---~~~~i~ 306 (454)
T TIGR00474 291 GGP--QAGIIVG---KKELIE 306 (454)
T ss_pred CCC--eEEEEEE---CHHHHH
Confidence 744 4898875 344443
No 255
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.02 E-value=4.5e-08 Score=93.92 Aligned_cols=197 Identities=15% Similarity=0.089 Sum_probs=121.4
Q ss_pred CCCCCCCCCH---HHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-
Q 047180 87 MEYLPMGGSV---KMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR- 162 (337)
Q Consensus 87 ~~Y~~~~G~~---~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~- 162 (337)
+-|+- .|.| .|.+.+++..-+. ..+.+..|..|+..++..+.. +||.|++++..|..-...++
T Consensus 47 ~~Y~R-~gnPt~~~le~~la~Le~g~----------~a~~~~SGmaAi~~~l~~ll~--~Gd~iv~~~~~Y~~t~~~~~~ 113 (386)
T PF01053_consen 47 YIYSR-YGNPTVRALEQRLAALEGGE----------DALLFSSGMAAISAALLALLK--PGDHIVASDDLYGGTYRLLEE 113 (386)
T ss_dssp CSBTT-TC-HHHHHHHHHHHHHHT-S----------EEEEESSHHHHHHHHHHHHS---TTBEEEEESSSSHHHHHHHHH
T ss_pred cceec-cccccHHHHHHHHHHhhccc----------ceeeccchHHHHHHHHHhhcc--cCCceEecCCccCcchhhhhh
Confidence 45653 3554 4666676654221 246788999999888776666 89999999999998776665
Q ss_pred ---hcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-ceeEEcccC
Q 047180 163 ---DAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKG-HFPFFDMAY 238 (337)
Q Consensus 163 ---~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~-~~ii~De~Y 238 (337)
..|.++..++. -|++++++++.. +..+|+.-+|.||+..+. ++++|+++|++++ +++|+|..+
T Consensus 114 ~l~~~gv~v~~~d~-------~d~~~l~~~l~~---~t~~v~~EspsNP~l~v~---Dl~~i~~~a~~~g~~~~vVDnT~ 180 (386)
T PF01053_consen 114 LLPRFGVEVTFVDP-------TDLEALEAALRP---NTKLVFLESPSNPTLEVP---DLEAIAKLAKEHGDILVVVDNTF 180 (386)
T ss_dssp CHHHTTSEEEEEST-------TSHHHHHHHHCT---TEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTT
T ss_pred hhcccCcEEEEeCc-------hhHHHHHhhccc---cceEEEEEcCCCcccccc---cHHHHHHHHHHhCCceEEeeccc
Confidence 36777665532 478999998863 344445588999997776 5778889999998 999999988
Q ss_pred CCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccc-cceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHH
Q 047180 239 QGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQR-VGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGAL 317 (337)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R-vG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~ 317 (337)
..-.. + .++. .+ --|++.|.+|.++=.|-- .|.+++ .+..+..++++..... .-...+.+...
T Consensus 181 atp~~--~----~pL~----~G-aDivv~S~TKyl~Ghsdv~~G~vv~-~~~~~~~~~l~~~~~~----~G~~~~p~da~ 244 (386)
T PF01053_consen 181 ATPYN--Q----NPLE----LG-ADIVVHSATKYLSGHSDVMGGAVVV-NGSSELYDRLREFRRL----LGATLSPFDAW 244 (386)
T ss_dssp THTTT--C-----GGG----GT--SEEEEETTTTTTTSSSE-EEEEEE-SSHHHHHHHHHHHHHH----HT-B--HHHHH
T ss_pred cceee--e----ccCc----CC-ceEEEeeccccccCCcceeeEEEEE-Cchhhhhhhhcchhhh----cCccchHHHHH
Confidence 54321 1 1111 12 237789999999734433 455543 2225555555432221 12234555555
Q ss_pred HHHHHhCC
Q 047180 318 IVSTILGD 325 (337)
Q Consensus 318 ~~~~~l~~ 325 (337)
.+.+-|+.
T Consensus 245 ll~rgl~T 252 (386)
T PF01053_consen 245 LLLRGLRT 252 (386)
T ss_dssp HHHHHHTT
T ss_pred HHhcCCCc
Confidence 55555554
No 256
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.00 E-value=5e-08 Score=94.42 Aligned_cols=189 Identities=19% Similarity=0.160 Sum_probs=121.2
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc-hHHHHHhcCc
Q 047180 88 EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSN-HHNIWRDAHV 166 (337)
Q Consensus 88 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~-y~~~~~~~G~ 166 (337)
.|..+....+|-+++++++ |.. . .+.|+.|+.|+.++..+... |||+| +.-+|.. ....+...|+
T Consensus 73 ~Yagd~s~~~LE~~vAe~l-G~e-------~--aV~v~sGTaAl~ll~~l~v~--pGd~V--p~n~~f~Tt~ahI~~~Ga 138 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY-GFK-------H--VVPTHQGRGAENLLSRIAIK--PGQYV--PGNMYFTTTRYHQELNGG 138 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH-CCC-------e--EEEeCCHHHHHHHHHHhCCC--CcCEE--CCccchHhhHHHHHhCCc
Confidence 4877777889999999986 432 1 46888999999986544433 89975 4433333 3344788898
Q ss_pred eeeEeeec--------cCCCCCCChHHHHHHHHcCC-CCeEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 167 TQRTFHYY--------HPGTKGLDFAALMDDIKNAP-NGSFFLLHACAHNPT-GVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 167 ~~~~~~~~--------~~~~~~~d~~~l~~~l~~~~-~~~~ili~~~p~NPT-G~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
..+.+... ++.++.+|++++++.+++.. .+..++..-.++|-. |..+|.++++++.++|++||+.|++|-
T Consensus 139 ~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~Da 218 (460)
T PRK13237 139 IFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDA 218 (460)
T ss_pred EEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEEC
Confidence 76666311 23467899999999987531 111112223468998 799999999999999999999999998
Q ss_pred cCC-C---CCC---CCCccchHHHH----HhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 237 AYQ-G---FAS---GDPERDAKAIR----IFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 237 ~Y~-~---~~~---~~~~~~~~~~~----~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+.. + |.. ..+. + .++. .+.+.. + .++.||+|.++.+ . =|+++. .|+++.++++.
T Consensus 219 Ara~gna~fI~~re~~y~-~-~~i~ei~~e~~s~a-D-~~t~S~~K~~~~~-~-GG~i~t--~D~eL~~~~r~ 283 (460)
T PRK13237 219 TRCVENAYFIKEREEGYQ-D-KSIKEIVHEMFSYA-D-GCTMSGKKDCLVN-I-GGFLAM--NDEELFDEAKE 283 (460)
T ss_pred cchhcChhhhcccccccC-C-CcHhHHhhhccCcC-c-EEEEeCCCCCCCC-C-ceEEEE--CCHHHHHHHHH
Confidence 653 1 110 0011 1 1121 111112 2 4456799999853 2 366653 78887777654
No 257
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=98.98 E-value=5e-08 Score=90.23 Aligned_cols=229 Identities=14% Similarity=0.003 Sum_probs=141.1
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeE
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQI 147 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~V 147 (337)
..+.|++.+++.+.+....-.|+...-...+-+.+++.+ ++ ..++.+++||.+-.+++....+ ||+.|
T Consensus 10 ~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~~ae~~-g~---------~a~~Fv~sGT~aN~lal~~~~~--~~~~v 77 (342)
T COG2008 10 AGPTPEMREALAAANAVGDDVYGEDPTTNALEQRIAELF-GK---------EAALFVPSGTQANQLALAAHCQ--PGESV 77 (342)
T ss_pred CCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHHHHHHh-CC---------ceEEEecCccHHHHHHHHHhcC--CCCeE
Confidence 456788999887764334456766544445555555543 32 2367888999998888877766 89888
Q ss_pred EEcCCCCcchH---HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc----CCCCeEEEEeCCCCCCCCCCCCHHHHHH
Q 047180 148 YIPVPTWSNHH---NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN----APNGSFFLLHACAHNPTGVDPSEEQWKE 220 (337)
Q Consensus 148 lv~~P~y~~y~---~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~~~ili~~~p~NPTG~~~s~~~~~~ 220 (337)
++..-.- .|. ..++..| .+.+++..+..+..+++++++..+.. +..++.+++.+ .||=-|.+||.+++++
T Consensus 78 i~~~~aH-i~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~-~~te~GtVy~l~el~~ 154 (342)
T COG2008 78 ICHETAH-IYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLEN-TATEGGTVYPLDELEA 154 (342)
T ss_pred EEecccc-ceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEee-ccCCCceecCHHHHHH
Confidence 8865433 232 2334333 23334443445688999999997763 22334555442 3445599999999999
Q ss_pred HHHHHHhcCceeEEcccCC--CCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 221 ISYQIKAKGHFPFFDMAYQ--GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 221 l~~~~~~~~~~ii~De~Y~--~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
|.++|+++++.|-.|=+-. .++.- ..+ .+... .+-+++++ ++||..+.| +|.+++ .|.+.++++.-
T Consensus 155 i~~~~k~~~l~LHmDGAR~~nA~val--g~~---~~~~~-~~~D~v~~-~~tK~g~~~---~gAiv~--gn~~~~~~a~~ 222 (342)
T COG2008 155 ISAVCKEHGLPLHMDGARLANALVAL--GVA---LKTIK-SYVDSVSF-CLTKGGGAP---VGAIVF--GNRDFAKRARR 222 (342)
T ss_pred HHHHHHHhCCceeechHHHHHHHHHc--CCC---HHHHH-hhCCEEEE-ecccCCcce---eeeEEE--cCHHHHHHHHH
Confidence 9999999999999997532 12111 011 12221 12345554 579988654 788876 68888887765
Q ss_pred HHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 299 QLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 299 ~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
.-+. ....++ ...+.......+|++
T Consensus 223 ~rK~-~Ggl~~-k~r~laA~~~~~l~~ 247 (342)
T COG2008 223 WRKR-AGGLMR-KARFLAAQGLYALED 247 (342)
T ss_pred HHHH-hcccHh-hhhHHHHHHHHHHhc
Confidence 3332 222333 345555556666775
No 258
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=98.96 E-value=7.4e-08 Score=94.25 Aligned_cols=189 Identities=14% Similarity=0.056 Sum_probs=108.3
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH-HhcCc--e-----------eeEeeeccCCC--CC----
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW-RDAHV--T-----------QRTFHYYHPGT--KG---- 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~-~~~G~--~-----------~~~~~~~~~~~--~~---- 180 (337)
++.+++|++|...++.+........+|+..+-.|....... ...+. . +..+|..+... .+
T Consensus 106 v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (433)
T PRK08117 106 FFFSNSGAEAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPE 185 (433)
T ss_pred EEEeCcHHHHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchh
Confidence 56789999999988875443322368888888887754322 12211 0 12222211000 00
Q ss_pred ----CChHHHHHHHHc--CCCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 181 ----LDFAALMDDIKN--APNGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 181 ----~d~~~l~~~l~~--~~~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
-|++.+++.++. .+.....++.-.-+.-.|.+ .+++.+++|.++|++||+++|+||+|.+|... . .....
T Consensus 186 ~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~-G--~~~~~ 262 (433)
T PRK08117 186 VCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRT-G--EWFAA 262 (433)
T ss_pred HHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCcc-c--cchhH
Confidence 145556666542 12233333333233334554 68999999999999999999999999987421 1 11111
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
..+ + -..-+.+|||.+| .|+++|++++ ++++.+.+.. .....++ +.+.+++.++..+|+
T Consensus 263 ~~~---g-v~pDi~t~sK~lg-~G~pigav~~---~~~i~~~~~~---~~~~~T~-~~np~~~aaa~a~L~ 321 (433)
T PRK08117 263 QTF---G-VVPDIMTIAKGIA-SGLPLSAVVA---SKELMEQWPL---GSHGTTF-GGNPVACAAALATLE 321 (433)
T ss_pred hhc---C-CCCCEeehhhhcc-CCCcceeEEE---cHHHHhhccC---CCCCCCC-CcCHHHHHHHHHHHH
Confidence 111 1 1112469999999 8999998875 4555444321 1112233 346777877777766
No 259
>PRK08114 cystathionine beta-lyase; Provisional
Probab=98.94 E-value=1.3e-07 Score=91.08 Aligned_cols=172 Identities=12% Similarity=-0.010 Sum_probs=112.3
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
.+.+.+|+.|+..++..+.. +||+|++++..|.+-...+ +..|.++..++. .|.+.+++++.. +.
T Consensus 80 a~~~~SGmaAi~~~~~~ll~--~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~-------~d~~~l~~~l~~--~T 148 (395)
T PRK08114 80 CALYPCGAAAVANAILAFVE--QGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP-------LIGADIAKLIQP--NT 148 (395)
T ss_pred EEEEhHHHHHHHHHHHHHcC--CCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC-------CCHHHHHHhcCC--Cc
Confidence 46788899999988766655 9999999998887665443 567888776642 367888888853 33
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAK--GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~--~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
++|+ +-+|.||||.+.+ +++|+++|+++ ++++|+|.++.-=.. + + +. +.+ -=+++.|.+|.++
T Consensus 149 rlV~-~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~--~--~--pl----~~G-aDivv~S~tKyl~ 213 (395)
T PRK08114 149 KVVF-LESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL--F--K--AL----DFG-IDISIQAGTKYLV 213 (395)
T ss_pred eEEE-EECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc--c--C--HH----HcC-CcEEEEcCccccc
Confidence 4554 4789999999986 67788888897 499999998753111 1 1 11 112 1377899999886
Q ss_pred ccc-cccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 275 LYG-QRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 275 ~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
-+| .-.|.++ .+++..+++..... ..-.+.+.+..+.+.+-|+.
T Consensus 214 Ghsdv~~G~v~---~~~~~~~~l~~~~~----~~G~~~~p~~a~l~~rgl~T 258 (395)
T PRK08114 214 GHSDAMIGTAV---ANARCWEQLRENSY----LMGQMVDADTAYMTSRGLRT 258 (395)
T ss_pred CCCcceeEEEE---cCHHHHHHHHHHHH----hccCCCCHHHHHHHHcCCCc
Confidence 565 5567443 35555444443211 11224455555555444443
No 260
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=98.92 E-value=2.7e-07 Score=89.72 Aligned_cols=156 Identities=10% Similarity=0.020 Sum_probs=97.6
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH-HhcCc------------eeeEeeeccCCCC-CCChHHHH
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW-RDAHV------------TQRTFHYYHPGTK-GLDFAALM 187 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~-~~~G~------------~~~~~~~~~~~~~-~~d~~~l~ 187 (337)
+.+++|++|...++.+........+|+...-+|.+....+ ...|. .++.+|+.+.... .-+++.++
T Consensus 103 f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 182 (412)
T TIGR02407 103 FPGPTGTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFE 182 (412)
T ss_pred EeCCCchHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHH
Confidence 4468999999999876654433478999999998875432 22221 1122222110000 01356677
Q ss_pred HHHHcCC---CCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCC-CCCccchHHHHHhhhcCCe
Q 047180 188 DDIKNAP---NGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFAS-GDPERDAKAIRIFLKDGHL 262 (337)
Q Consensus 188 ~~l~~~~---~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~-~~~~~~~~~~~~~~~~~~~ 262 (337)
+.+.+.. .....++.-.-+++.|. +++++.+++|.++|+++|+++|+||++.+|.- |. ...... ....++
T Consensus 183 ~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~----~~a~~~-~~v~PD 257 (412)
T TIGR02407 183 KLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGT----FFSFEP-AGIEPD 257 (412)
T ss_pred HHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccch----hHHhcc-cCCCCC
Confidence 7775321 12233444557888998 68999999999999999999999999987731 10 001110 111234
Q ss_pred EEEEecccccccccccccceeEe
Q 047180 263 LGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 263 ~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+ .+|||.++-.|+|+|++++
T Consensus 258 i---~~~~K~lg~~G~pigav~~ 277 (412)
T TIGR02407 258 I---VCLSKSISGYGLPLALTLI 277 (412)
T ss_pred E---EEechhccCCccceeEEEE
Confidence 3 3589999933999999987
No 261
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.91 E-value=1e-07 Score=92.99 Aligned_cols=166 Identities=13% Similarity=0.034 Sum_probs=99.9
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-C-CCeEEEcCCCCcchHHHH-HhcCce------------eeEeeeccCCCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-P-DSQIYIPVPTWSNHHNIW-RDAHVT------------QRTFHYYHPGTKGL 181 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-p-gd~Vlv~~P~y~~y~~~~-~~~G~~------------~~~~~~~~~~~~~~ 181 (337)
+..+++|++|...++.+...+ . + ..+|+...-+|.+..... ...+.. +..+++...+....
T Consensus 105 v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 184 (423)
T PRK05964 105 VFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQA 184 (423)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHH
Confidence 467899999999988765433 1 2 368999998898754322 222211 11222211000011
Q ss_pred ChHHHHHHHHcCCCCe-EEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc
Q 047180 182 DFAALMDDIKNAPNGS-FFLLHACAHNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD 259 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~-~ili~~~p~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 259 (337)
+++.+++.+...+... .+++-|..++.+|... +.+.+++|.++|++||+++|+||++.+|... ........+ ..
T Consensus 185 ~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~---G~~~a~~~~-~v 260 (423)
T PRK05964 185 TLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRT---GTLFACEQA-GV 260 (423)
T ss_pred HHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---cchhHHHhc-CC
Confidence 2677777776433333 3444332477788765 9999999999999999999999999887421 011111111 11
Q ss_pred CCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 260 GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 260 ~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
.+.+ .++||.++-.++++|++++ ++++.+.+
T Consensus 261 ~pDi---~~~~K~l~gG~~p~~av~~---~~~i~~~~ 291 (423)
T PRK05964 261 SPDI---MCLSKGLTGGYLPLAATLC---TAEIFEAF 291 (423)
T ss_pred CCCe---eeeehhhhcCcccceEEEE---cHHHHHhh
Confidence 2233 4679999854489999764 56665554
No 262
>PRK06434 cystathionine gamma-lyase; Validated
Probab=98.89 E-value=1.2e-07 Score=91.13 Aligned_cols=161 Identities=12% Similarity=0.068 Sum_probs=101.5
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH----HHHHhcCceeeEe
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH----NIWRDAHVTQRTF 171 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~----~~~~~~G~~~~~~ 171 (337)
.+|-+.++++.-+.+ .+.+++|+.|+.+++..+.. |||+|+++.+.|..-. ..+...|.+++.+
T Consensus 67 ~~lE~~la~leg~~~----------av~~sSG~aAi~~al~all~--~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fv 134 (384)
T PRK06434 67 QAFEEKYAVLENAEH----------ALSFSSGMGAITSAILSLIK--KGKRILSISDLYGQTFYFFNKVLKTLGIHVDYI 134 (384)
T ss_pred HHHHHHHHHHhCCCc----------EEEeCCHHHHHHHHHHHHhC--CCCEEEEecCccchHHHHHHHHHHhcCcEEEEE
Confidence 456667777652221 46788899999988876655 9999999987665543 5667789998888
Q ss_pred eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchH
Q 047180 172 HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
+..+.+.+. +.. ++.+++++ .+|.|||+.+. ++++|+++|++++ +++|.++..-.. . .
T Consensus 135 d~~~~~~~~---------l~~-~~tklv~~-e~~snpt~~v~---Di~~I~~la~~~~--lvVD~t~~s~~~----~--~ 192 (384)
T PRK06434 135 DTDRLNSLD---------FDP-SNYDLIYA-ESITNPTLKVP---DIKNVSSFCHEND--VIVDATFASPYN----Q--N 192 (384)
T ss_pred CCCChhhee---------ecC-CCeeEEEE-EcCCCCCceee---cHHHHHHHHHHcC--eEEECCCCCccc----C--C
Confidence 763211222 111 12344444 78999999874 5788888899988 355998632111 0 1
Q ss_pred HHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHH
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~ 297 (337)
++. .+ --+++.|.+|.++-+| .=-|.++ +.+++..++++
T Consensus 193 pl~----~g-aDivv~S~tK~i~G~~d~~gG~vv--~~~~~~~~~~~ 232 (384)
T PRK06434 193 PLD----LG-ADVVIHSATKYISGHSDVVMGVAG--TNNKSIFNNLV 232 (384)
T ss_pred chh----cC-CCEEEeecccccCCCCCceEEEEe--cCcHHHHHHHH
Confidence 121 12 2366678999997555 3345443 35666555554
No 263
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=98.87 E-value=4.8e-07 Score=88.36 Aligned_cols=156 Identities=10% Similarity=0.042 Sum_probs=96.1
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCc------------eeeEeeeccCCCCC-CChHHHH
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHV------------TQRTFHYYHPGTKG-LDFAALM 187 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~------------~~~~~~~~~~~~~~-~d~~~l~ 187 (337)
+.+++|++|...++.+........+|+...-+|.+... .+...|. .++.+|+....+.. -|++.++
T Consensus 107 f~~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~ 186 (425)
T PRK09264 107 FTGPTGTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLE 186 (425)
T ss_pred EeCCCHHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHH
Confidence 34589999999998776544334688888888888653 2222221 12233321110001 2567788
Q ss_pred HHHHcCC---CC-eEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCe
Q 047180 188 DDIKNAP---NG-SFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHL 262 (337)
Q Consensus 188 ~~l~~~~---~~-~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 262 (337)
+.+.+.. .. ..+++=+- +.-.|. +++++.+++|.++|++||+++|+||++.+|..- ........+ ...++
T Consensus 187 ~~l~~~~~~~~~~aavi~Epv-~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~Grt---G~~~~~~~~-~v~PD 261 (425)
T PRK09264 187 KLLEDSSSGVDLPAAVIVETV-QGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRT---GTFFSFERA-GITPD 261 (425)
T ss_pred HHHHhccCCCCceEEEEEecc-cCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccc---cHHHHHhhc-CCCCC
Confidence 7775421 12 34554443 333565 679999999999999999999999999887321 011111111 11234
Q ss_pred EEEEecccccccccccccceeEe
Q 047180 263 LGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 263 ~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+ .+|||.+|..|+++|++++
T Consensus 262 i---~t~~K~l~~~G~pigav~~ 281 (425)
T PRK09264 262 I---VTLSKSISGYGLPMALVLI 281 (425)
T ss_pred E---EEeccccCCCccceEEEEE
Confidence 3 3679999966999999987
No 264
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=98.86 E-value=6.3e-07 Score=85.61 Aligned_cols=219 Identities=16% Similarity=0.111 Sum_probs=124.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhc---CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIA---GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~---~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
..++||+.-.|..-..+|....++.+++++.. ...-.-++...=..+|-+.+|+|+ |.. . .++-..|
T Consensus 39 ~~~~nf~SNdYLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~-g~e-------~--al~f~SG 108 (388)
T COG0156 39 RKVLNFCSNDYLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL-GAE-------A--ALLFSSG 108 (388)
T ss_pred ceeEeeeccCcccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh-CCC-------c--EEEEccc
Confidence 56788887666432222222222333333310 011111222223456778889886 331 1 2333344
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC--C-CeEEEEeCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP--N-GSFFLLHAC 204 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~--~-~~~ili~~~ 204 (337)
=.|-..++..|.. ++|.|+.-.-.--....-++..+++.+.+. . -|+++|++.+++.+ . +.++|+.-+
T Consensus 109 y~AN~~~i~~l~~--~~dli~~D~lnHASiidG~rls~a~~~~f~---H----nD~~~Le~~l~~~~~~~~~~~~Ivteg 179 (388)
T COG0156 109 FVANLGLLSALLK--KGDLIFSDELNHASIIDGIRLSRAEVRRFK---H----NDLDHLEALLEEARENGARRKLIVTEG 179 (388)
T ss_pred chhHHHHHHHhcC--CCcEEEEechhhhhHHHHHHhCCCcEEEec---C----CCHHHHHHHHHhhhccCCCceEEEEec
Confidence 3333333445555 788888888776667777788888888763 1 47889998887521 1 234444333
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEeccccccccccccccee
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQRVGCL 283 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~~ 283 (337)
==-=.|-+. .+++|++++++|+.++++||+|.-=+.|+ ...-....+--. .+..|+++||||.||..| ||+
T Consensus 180 VfSMdGdiA---pL~~l~~L~~ky~a~L~VDEAHa~Gv~G~--~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v 251 (388)
T COG0156 180 VFSMDGDIA---PLPELVELAEKYGALLYVDEAHAVGVLGP--NGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYI 251 (388)
T ss_pred cccCCCCcC---CHHHHHHHHHHhCcEEEEEccccccccCC--CCccHHHHhCCCCccceEEEEEchhhhcccC---cee
Confidence 222345554 47789999999999999999997544442 111112222111 234788999999999655 666
Q ss_pred EeeeCCHHHHHHHHHH
Q 047180 284 SVLCEDEKQAVAVKSQ 299 (337)
Q Consensus 284 ~~~~~~~~~~~~~~~~ 299 (337)
. .+..+++.++..
T Consensus 252 ~---g~~~~~d~L~~~ 264 (388)
T COG0156 252 A---GSAALIDYLRNR 264 (388)
T ss_pred e---CcHHHHHHHHHh
Confidence 5 466666665553
No 265
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=98.86 E-value=4.4e-07 Score=86.79 Aligned_cols=171 Identities=20% Similarity=0.195 Sum_probs=116.1
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh-hCCCCeEEEcCCCCcchH----HHHHhcCceeeE
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR-FHPDSQIYIPVPTWSNHH----NIWRDAHVTQRT 170 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~-~~pgd~Vlv~~P~y~~y~----~~~~~~G~~~~~ 170 (337)
.+.|+.+++++ +-. .++ .++.+.+++.++..++..+.. +.+||+|++.+=.|+.-. ...+..|.++..
T Consensus 46 ~~~r~~la~~l-g~~----~~~--~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~ 118 (371)
T PF00266_consen 46 EEAREALAKLL-GAP----PDE--EVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRV 118 (371)
T ss_dssp HHHHHHHHHHH-TSS----TTE--EEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEE
T ss_pred HHHHHHHHHhc-CCc----ccc--ccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcc
Confidence 46778888877 321 012 357889999999999877632 338999999998888766 233467899988
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++... +..+|++.+++.+. ++.+++.+ +.-+|-||...+ +++|.++|++++++++.|-+.. +...+++
T Consensus 119 i~~~~--~~~~~~~~~~~~l~--~~~~lv~~-~~~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~-~g~~~id--- 186 (371)
T PF00266_consen 119 IPADP--GGSLDLEDLEEALN--PDTRLVSI-SHVENSTGVRNP---IEEIAKLAHEYGALLVVDAAQS-AGCVPID--- 186 (371)
T ss_dssp EEEGT--TSSCSHHHHHHHHH--TTESEEEE-ESBETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTT-TTTSS-----
T ss_pred ccccc--cchhhhhhhhhhhc--cccceEEe-ecccccccEEee---eceehhhhhccCCceeEechhc-ccccccc---
Confidence 88732 46789999999997 23334444 666889999887 6678899999999999998764 2111111
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+...+.. +++.|.-|.+|.+| +|++++ +++.++++
T Consensus 187 -----~~~~~~D-~~~~s~~Kl~gp~G--~g~l~v---~~~~~~~~ 221 (371)
T PF00266_consen 187 -----LDELGAD-FLVFSSHKLGGPPG--LGFLYV---RPEAIERL 221 (371)
T ss_dssp -----TTTTTES-EEEEESTSTTSSST--EEEEEE---EHHHHHHH
T ss_pred -----ccccccc-eeeecccccCCCCc--hhhhee---hhhhhhcc
Confidence 1122222 45667788667666 698887 45555554
No 266
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=98.85 E-value=2.7e-08 Score=95.59 Aligned_cols=171 Identities=14% Similarity=0.039 Sum_probs=112.4
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCC----CCCh-----HHHHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTK----GLDF-----AALMDDIK 191 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~----~~d~-----~~l~~~l~ 191 (337)
.+.|+|++.++..++..+.. |||+|+++.=+--.....+.+.|++++.++-.++ .+ +++. +.+++++.
T Consensus 85 ~flvnGsT~g~~a~i~a~~~--~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~~~-~~gi~~~i~~~~~~~~~i~~~l~ 161 (417)
T PF01276_consen 85 FFLVNGSTSGNQAMIMALCR--PGDKVLVDRNCHKSVYNALILSGAIPVYIPPEDN-EYGIIGGISPDEFNEEDIEEALK 161 (417)
T ss_dssp EEESSHHHHHHHHHHHHHTT--TTCEEEEETT--HHHHHHHHHHTEEEEEEEEEE--TTS-BEEB-GGGGSHHHHHHHHH
T ss_pred EEEecCchHHHHHHHHHhcC--CCCEEEEcCCcHHHHHHHHHHcCCeEEEecCCcc-ccCCccCCChhhhhHHHHHHHHH
Confidence 57899999999998887777 9999999999999888899999999998865432 23 3455 88999998
Q ss_pred cCCCCeE---EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHHHhhh--cCCeEEE
Q 047180 192 NAPNGSF---FLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIRIFLK--DGHLLGL 265 (337)
Q Consensus 192 ~~~~~~~---ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~~~~~--~~~~~i~ 265 (337)
+.+..+. +++ .+| +=-|.++. +++|+++|.++++.|++||||.... |.++..+. +..-++ ....+++
T Consensus 162 ~~p~~k~~~~vvl-t~P-TY~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a--~~~gad~~~~~~~~v 234 (417)
T PF01276_consen 162 EHPDAKAPRLVVL-TSP-TYYGVCYD---IKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSA--LALGADRPNDPGIIV 234 (417)
T ss_dssp HCTTCHCESEEEE-ESS--TTSEEE----HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTC--SSTTSS-CTSBEEEE
T ss_pred hCccccCceEEEE-eCC-CCCeEEEC---HHHHHHHhcccCCEEEEEccccccccCCCCccch--hhccCccccccceee
Confidence 8765544 454 343 55799985 6678889999999999999997643 21111100 000011 1246788
Q ss_pred EecccccccccccccceeEeeeCCH-HHHHHHHHHHHhh
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDE-KQAVAVKSQLQQL 303 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~-~~~~~~~~~l~~~ 303 (337)
+.|.=|+.+ ++.=+.++-...+. -..+++.+.+...
T Consensus 235 vqS~HKtL~--altQts~lh~~~~~~v~~~~~~~~l~~~ 271 (417)
T PF01276_consen 235 VQSTHKTLP--ALTQTSMLHVKGDRIVDHERVNEALSMH 271 (417)
T ss_dssp EEEHHHHSS--S-TT-EEEEEETCCCTTHHHHHHHHHHH
T ss_pred eechhhccc--ccccceEEEecCCCcccHHHHHHHHHHH
Confidence 999999985 67666655444443 3346666666544
No 267
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=98.85 E-value=5.6e-07 Score=87.62 Aligned_cols=219 Identities=15% Similarity=0.091 Sum_probs=118.7
Q ss_pred CchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCC---CCC---HHHHH----HHHH
Q 047180 36 DPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPM---GGS---VKMVE----ETLK 104 (337)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~---~G~---~~lr~----aia~ 104 (337)
..+++++++-.... .+.++|--.+ -+..|.+++|.... ......+|+.+ .|. .+|-+ .+++
T Consensus 14 ~~~~~~~~~~~~~~-~~~~~l~~se-------n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~ 85 (416)
T PRK13034 14 DEVFAAINKELERQ-QDHLELIASE-------NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQ 85 (416)
T ss_pred HHHHHHHHHHHHHH-hcCeeecccc-------cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHH
Confidence 45677664332222 3567766542 34577787766542 11111112111 232 34444 6666
Q ss_pred HHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch-HHHHHh--cCcee--eEeeeccCCCC
Q 047180 105 LAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH-HNIWRD--AHVTQ--RTFHYYHPGTK 179 (337)
Q Consensus 105 ~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y-~~~~~~--~G~~~--~~~~~~~~~~~ 179 (337)
++ +.. .. .+.+++|+.|+..++..+.. |||+|+++..+|... ..-++. .|... +.+.. +..++
T Consensus 86 l~-g~~-------~a-lv~~~SG~~A~~~~l~al~~--~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~ 153 (416)
T PRK13034 86 LF-GCD-------YA-NVQPHSGSQANGAVYLALLK--PGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGV-DRLTG 153 (416)
T ss_pred Hh-CCC-------ce-EEecCCcHHHHHHHHHHhcC--CCCEEEEcCccceeeeecCCcceeccceeeeEEccc-ccccC
Confidence 54 321 11 23467889999888877765 999999999988762 211111 12111 23332 22346
Q ss_pred CCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc
Q 047180 180 GLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD 259 (337)
Q Consensus 180 ~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 259 (337)
.+|++++++.+... +.++ |+...+. +|... ++.+|.++|+++++++|+|+++.--..+. +. ....+
T Consensus 154 ~~d~~~le~~l~~~-~~kl-Vi~~~~~--~g~~~---dl~~l~~la~~~g~~livD~Aha~G~~~~---g~-~~~~~--- 219 (416)
T PRK13034 154 LIDYDEVEELAKEH-KPKL-IIAGFSA--YPREL---DFARFREIADEVGALLMVDMAHIAGLVAA---GE-HPNPF--- 219 (416)
T ss_pred CcCHHHHHHHHhhc-CCeE-EEECCCc--ccccc---CHHHHHHHHHHcCCEEEEeCcccccCccc---CC-CCCCC---
Confidence 68999999887542 2334 4434443 34443 57778888999999999999864211110 00 00011
Q ss_pred CCeEEEEecccccccccccccceeEeeeCCHHH
Q 047180 260 GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQ 292 (337)
Q Consensus 260 ~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~ 292 (337)
..--+++.|++|.++-+. -|+++. .++..
T Consensus 220 ~~~Di~~~s~~K~l~g~~--GG~v~~--~~~~~ 248 (416)
T PRK13034 220 PHAHVVTTTTHKTLRGPR--GGMILT--NDEEI 248 (416)
T ss_pred CCceEEEEeCcccCCCCC--CeEEEE--CcHHH
Confidence 112377789999994222 365543 44443
No 268
>PRK02769 histidine decarboxylase; Provisional
Probab=98.84 E-value=7.7e-08 Score=92.36 Aligned_cols=155 Identities=21% Similarity=0.203 Sum_probs=108.8
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEE
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFL 200 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~il 200 (337)
..+|.||+++...++....++.++++|++++-..+.....++..|.+.+.++.. + ++.+|+++|++.+.+...+++++
T Consensus 87 G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~-~-~g~id~~~L~~~i~~~~~~t~lv 164 (380)
T PRK02769 87 GYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL-P-NGEIDYDDLISKIKENKNQPPII 164 (380)
T ss_pred EEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC-C-CCcCcHHHHHHHHHhCCCCcEEE
Confidence 467999999976665444444578999999999999989999999988888873 3 56799999999987542235555
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcC---ceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc
Q 047180 201 LHACAHNPTGVDPSEEQWKEISYQIKAKG---HFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG 277 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~~~~l~~~~~~~~---~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 277 (337)
+.+.++|+||.+-+ +++|+++|++++ +++.+|-+|..+.-. +.+....+. +.. +-..+ .-|.-|.++.|
T Consensus 165 v~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p-~~~~~~~~d-~~~-~vDsi-s~s~HK~~~~P- 236 (380)
T PRK02769 165 FANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILP-FVNNPPPFS-FAD-GIDSI-AISGHKFIGSP- 236 (380)
T ss_pred EEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeec-ccCccccCC-ccC-CCCEE-EECCcccCCCC-
Confidence 56789999999977 556778888997 699999999875421 111110111 111 22333 34667988732
Q ss_pred cccceeEe
Q 047180 278 QRVGCLSV 285 (337)
Q Consensus 278 ~RvG~~~~ 285 (337)
..+|.+++
T Consensus 237 ~g~G~l~~ 244 (380)
T PRK02769 237 MPCGIVLA 244 (380)
T ss_pred CCcEEEEE
Confidence 45888876
No 269
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=98.84 E-value=1.7e-08 Score=92.83 Aligned_cols=193 Identities=15% Similarity=0.069 Sum_probs=106.5
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh--C--CCCeEEEcCCCCcchHHHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF--H--PDSQIYIPVPTWSNHHNIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~--~--pgd~Vlv~~P~y~~y~~~~~~~G~~~~~ 170 (337)
.++|.++|.+.-.--++. ..+++ -+++..|+++.+..++-+|+-. . +.-.|+...|+|+.|.............
T Consensus 45 s~eL~~~Ir~LH~~VGNA-vt~gr-~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~ 122 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNA-VTDGR-YIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYK 122 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB---TTS-EEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEE
T ss_pred cHHHHHHHHHHHHHhccc-cccCc-EEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcc
Confidence 367888887764222222 33344 3577888999998888777654 2 2368999999999999877665544444
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
..- +...|. ........|=+.++||||.|.. .+.+ ++..+..+|.|-+|-.=. .
T Consensus 123 w~G-da~~~~----------~~~~~~~~IElVTSPNNPDG~l-----r~~V---~~g~~~k~I~D~AYYWPh-------y 176 (363)
T PF04864_consen 123 WAG-DASNFK----------NSDNPSPYIELVTSPNNPDGQL-----REAV---LNGSSGKVIHDLAYYWPH-------Y 176 (363)
T ss_dssp EEE-ECCCGT----------T-S-CCGEEEEEESS-TTT-----------S---STTTEEEEEEE-TT-STT-------T
T ss_pred ccc-cHHhhc----------cCCCCCCeEEEEeCCCCCcccc-----cchh---cCCCCcceeeeeeeeccc-------c
Confidence 433 221221 1111235665568999999985 2222 344556689999985321 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.++.. ..++=|.+-|+||.=|=+|-|+||.++ +|+++.+++...+.. ...+++.=+|.=+..+|.
T Consensus 177 TpI~~---~aD~DiMLFT~SK~TGHAGSR~GWAlV--KD~~Va~kM~~y~~l----nTiGvS~dsQLRa~kiLk 241 (363)
T PF04864_consen 177 TPITA---PADHDIMLFTLSKLTGHAGSRFGWALV--KDEEVAKKMTKYMEL----NTIGVSRDSQLRALKILK 241 (363)
T ss_dssp S---S----B--SEEEEEHHHHCS-GGG-EEEEEE--S-HHHHHHHHHHHHH----HCSS--HHHHHHHHHHHH
T ss_pred cccCC---CCCCceEEEEEecccCccccccceeee--cCHHHHHHHHHHHHH----hcccCcHHHHHHHHHHHH
Confidence 12221 123457778999999999999999987 899888877765553 234567667765555543
No 270
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=98.82 E-value=2.1e-07 Score=88.40 Aligned_cols=202 Identities=17% Similarity=0.089 Sum_probs=138.1
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh------cCcCC-CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI------AGTAN-MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~------~~~~~-~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
..+.+.|-.|.. .+.++.|.+|+... ++... .+|-+..+..+-|+.+|+++... +.+ ++
T Consensus 41 ~~~~vyld~~at------~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd------~~d--Ii 106 (428)
T KOG1549|consen 41 GTRPVYLDNQAT------GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINAD------PSD--IV 106 (428)
T ss_pred CCccEEEecCcC------CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCC------CCc--EE
Confidence 345666666542 33456676666553 22222 33334445778899999988432 233 57
Q ss_pred eeccchhHHHHHHHHHhhhCCCC----eEEEcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC
Q 047180 123 QSLSGTGACRLFADFQKRFHPDS----QIYIPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN 195 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~~pgd----~Vlv~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 195 (337)
.|.|+|+++.+++.-+..+ ++| .|++..--|+.... .++..|.+++.+|+. +.+..|.+.+++.++. +
T Consensus 107 Fts~ATEs~Nlvl~~v~~~-~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~--~ 181 (428)
T KOG1549|consen 107 FTSGATESNNLVLKGVARF-FGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRS--K 181 (428)
T ss_pred EeCCchHHHHHHHHHhhcc-ccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCC--C
Confidence 9999999999998766543 567 99999988888754 456688999999984 3577899999999873 4
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
++++.| -.=+|=+|.+.+ +++|+++|+++++.++.|.+.. ... ..-| +. +.+.. ++..|.=|.||.
T Consensus 182 T~lv~I-~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQa-vG~--i~vD---V~---eln~D-~~s~s~HK~ygp 247 (428)
T KOG1549|consen 182 TRLVSI-MHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQA-VGK--IPVD---VQ---ELNAD-FLSISAHKIYGP 247 (428)
T ss_pred ceEEEE-EecccCcccccc---HHHHHHHhCcCCcEEEeehhhh-cCC--cccc---HH---HcCch-heeeecccccCC
Confidence 444444 566899999998 6678899999999999998753 211 1111 11 12222 333456799999
Q ss_pred cccccceeEee
Q 047180 276 YGQRVGCLSVL 286 (337)
Q Consensus 276 ~G~RvG~~~~~ 286 (337)
+| +|++.+-
T Consensus 248 ~~--iGaLYvr 256 (428)
T KOG1549|consen 248 PG--IGALYVR 256 (428)
T ss_pred Cc--ceEEEEc
Confidence 99 9999973
No 271
>PLN03032 serine decarboxylase; Provisional
Probab=98.82 E-value=8.3e-08 Score=91.74 Aligned_cols=155 Identities=15% Similarity=0.088 Sum_probs=105.4
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEE
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFL 200 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~il 200 (337)
.++|.|||+|..+++....+..++..|+++.-.-+.....++..|.+++.+|+ ++ ++.+|+++|++.+.+....++++
T Consensus 88 G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~-d~-~g~id~~~L~~~i~~~~~~~~lv 165 (374)
T PLN03032 88 GYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPT-LP-SGEIDYDDLERALAKNRDKPAIL 165 (374)
T ss_pred EEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeee-CC-CCcCcHHHHHHHHHHcCCCCEEE
Confidence 57899999998877765443335668888887777788888999998888887 33 57899999999997532234455
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcC-----ceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 201 LHACAHNPTGVDPSEEQWKEISYQIKAKG-----HFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~~~~l~~~~~~~~-----~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
+.+-.+|+||.+- .+++|+++|++++ +++.+|-+|....-. +....+... +. .+-.. +.-|.-|.++.
T Consensus 166 v~tagtt~tG~id---pi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p-~~~~~~~~~-~~-~~vDS-is~s~HK~~g~ 238 (374)
T PLN03032 166 NVNIGTTVKGAVD---DLDRILRILKELGYTEDRFYIHCDGALFGLMMP-FVSRAPEVT-FR-KPIGS-VSVSGHKFLGC 238 (374)
T ss_pred EEEecCcCCccCC---CHHHHHHHHHHhCCCCCCeeEEEEccchhhhhh-ccCCCcccC-CC-cCCcE-EEECcccccCC
Confidence 5567899999994 4667888888986 589999998764311 111100000 11 11122 33477898873
Q ss_pred cccccceeEe
Q 047180 276 YGQRVGCLSV 285 (337)
Q Consensus 276 ~G~RvG~~~~ 285 (337)
-.-+|.+++
T Consensus 239 -P~g~G~ll~ 247 (374)
T PLN03032 239 -PMPCGVALT 247 (374)
T ss_pred -CcCeEEEEE
Confidence 244788776
No 272
>PRK06541 hypothetical protein; Provisional
Probab=98.80 E-value=1e-06 Score=86.88 Aligned_cols=163 Identities=12% Similarity=0.080 Sum_probs=99.0
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-C-CCeEEEcCCCCcchHHH-HHhcCce------------eeEeeeccCCC---
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-P-DSQIYIPVPTWSNHHNI-WRDAHVT------------QRTFHYYHPGT--- 178 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-p-gd~Vlv~~P~y~~y~~~-~~~~G~~------------~~~~~~~~~~~--- 178 (337)
+..+++|++|...++.+.... . + ..+|+...=+|.+.... +...|.. +..+|..+...
T Consensus 115 v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 194 (460)
T PRK06541 115 VFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPE 194 (460)
T ss_pred EEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccc
Confidence 567999999999888655432 1 2 36788888888776532 2222211 12222111000
Q ss_pred CCCC--------hHHHHHHHHcC-CCCeEEEEeCCC-CCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCCCCC-CCCC
Q 047180 179 KGLD--------FAALMDDIKNA-PNGSFFLLHACA-HNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDP 246 (337)
Q Consensus 179 ~~~d--------~~~l~~~l~~~-~~~~~ili~~~p-~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~ 246 (337)
+.-+ ++.+++.+... +.....++ ..| ++++|.+.+ ++.+++|.++|+++|+++|.||++.+|. .+.
T Consensus 195 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi-~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~- 272 (460)
T PRK06541 195 LGDDPEAFGRWAADRIEEAIEFEGPDTVAAVF-LEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGE- 272 (460)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEE-ECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCch-
Confidence 1112 25566666532 23344444 345 999999865 9999999999999999999999998872 221
Q ss_pred ccchHHHHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHH
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...++++ +|||.++ .|+ ++|++++ .+++.+.+
T Consensus 273 ---~~a~~~~-gv~PDiv---t~gK~l~-~G~~pigav~~---~~~i~~~~ 312 (460)
T PRK06541 273 ---MFGCERF-GYVPDII---TCAKGIT-SGYSPLGAMIA---SDRLFEPF 312 (460)
T ss_pred ---hhhhhhc-CCCCCEE---Eeccccc-CCccceeEEEE---cHHHHHHh
Confidence 1111111 1123444 4899999 797 9999986 45544444
No 273
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.79 E-value=1.7e-06 Score=82.64 Aligned_cols=191 Identities=18% Similarity=0.112 Sum_probs=120.3
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCceeeEe
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQRTF 171 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~~~~ 171 (337)
..|-++++.+--+. ..+.+..|..|+..++..+.+ +||.|++++..|..-.. .++..|.++..+
T Consensus 66 ~~lE~~~a~LEg~~----------~~~afsSGmaAI~~~~l~ll~--~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~ 133 (396)
T COG0626 66 DALEEALAELEGGE----------DAFAFSSGMAAISTALLALLK--AGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV 133 (396)
T ss_pred HHHHHHHHHhhCCC----------cEEEecCcHHHHHHHHHHhcC--CCCEEEecCCccchHHHHHHHHHHhcCeEEEEE
Confidence 45666667654121 246889999999997766666 89999999999888554 445677776655
Q ss_pred eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchH
Q 047180 172 HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
.. .+.+..++++.+ ++.++|++ =+|.|||-.+.. +.+|+++|+++++++|+|..|..-.+. .
T Consensus 134 d~-------~~~~~~~~~~~~-~~tk~v~l-EtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q---~--- 195 (396)
T COG0626 134 DP-------GDDEALEAAIKE-PNTKLVFL-ETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQ---R--- 195 (396)
T ss_pred CC-------CChHHHHHHhcc-cCceEEEE-eCCCCccccccc---HHHHHHHHHhcCCEEEEECCccccccc---C---
Confidence 32 234555555542 23445554 889999998865 778889999999999999988654321 1
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++. .+ -=|+++|.+|.+|=.+-=+|=+++ +++++..+.+...... .+=...+.+..+.+.+=|+.
T Consensus 196 PL~----~G-aDIVvhSaTKyl~GHsDvl~G~v~-~~~~~~~~~~~~~~~~---~~G~~l~p~dA~l~lRGlkT 260 (396)
T COG0626 196 PLE----LG-ADIVVHSATKYLGGHSDVLGGVVL-TPNEELYELLFFAQRA---NTGAVLSPFDAWLLLRGLRT 260 (396)
T ss_pred hhh----cC-CCEEEEeccccccCCcceeeeEEe-cChHHHHHHHHHHHHh---hcCCCCCHHHHHHHHhccch
Confidence 121 12 237889999999856655555443 3555555544322221 11123444555555444443
No 274
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.76 E-value=1.1e-06 Score=81.75 Aligned_cols=159 Identities=21% Similarity=0.209 Sum_probs=103.3
Q ss_pred eeccchhHHHHHHHHHhhhCCCCeEEE-cCCCCcchHHHH----------HhcCceeeEeeeccCCCCCCChHHHHHHHH
Q 047180 123 QSLSGTGACRLFADFQKRFHPDSQIYI-PVPTWSNHHNIW----------RDAHVTQRTFHYYHPGTKGLDFAALMDDIK 191 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~~pgd~Vlv-~~P~y~~y~~~~----------~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~ 191 (337)
+..+||.||.+++..+.+ |||+.+. ...-|......+ +..|.++..+++.+ +..+|++.+++++.
T Consensus 77 q~vSGTHAi~~~Lfg~Lr--pGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~--dg~~D~~~i~~~~~ 152 (403)
T PF06838_consen 77 QFVSGTHAIALALFGVLR--PGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTE--DGTIDWEAIKKALK 152 (403)
T ss_dssp TS-SHHHHHHHHHHHH----TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-T--TSSB-HHHHHHHHH
T ss_pred cccchHHHHHHHHHhcCC--CCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecC--CCCcCHHHHHHhhc
Confidence 456789999998877666 9999884 445555555554 45667788888853 57899999999998
Q ss_pred cCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh--cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecc
Q 047180 192 NAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKA--KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSY 269 (337)
Q Consensus 192 ~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~--~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 269 (337)
++.++++|+-|..--+=..++.++++++++++++ .++++++|.+|.+|+.. .+ |.. .+ -=++.+|+
T Consensus 153 --~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~--~E---P~~----vG-ADl~aGSL 220 (403)
T PF06838_consen 153 --PNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVET--QE---PTE----VG-ADLMAGSL 220 (403)
T ss_dssp --TTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSS--S----GGG----GT--SEEEEET
T ss_pred --cCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccc--cC---ccc----cc-hhheeccc
Confidence 3567888877666666667899999999999998 58999999999999742 11 111 12 12778999
Q ss_pred ccccccccc--ccceeEeeeCCHHHHHHHHHHHH
Q 047180 270 AKNMGLYGQ--RVGCLSVLCEDEKQAVAVKSQLQ 301 (337)
Q Consensus 270 SK~~~~~G~--RvG~~~~~~~~~~~~~~~~~~l~ 301 (337)
=|+-| .|+ -=||+++ ..+++++....|.
T Consensus 221 IKNpG-GgiAptGGYIaG---r~~lVe~~a~RLT 250 (403)
T PF06838_consen 221 IKNPG-GGIAPTGGYIAG---RKDLVERAAYRLT 250 (403)
T ss_dssp TSGGG-TTT-SS-EEEEE---SHHHHHHHHHHHS
T ss_pred eeCCC-CCccCcCCEEec---hHHHHHHHHhhhc
Confidence 99998 676 3477764 6888887766554
No 275
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=98.72 E-value=2e-06 Score=83.16 Aligned_cols=212 Identities=12% Similarity=-0.006 Sum_probs=121.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|....--|. ..|.+.+|+++ +.. ..+.+. ....+....+++++.... + .++ ++.+++|++
T Consensus 36 ~~~lD~~sg~~~~~lGh--~~p~v~~a~~~q~~~-~~~~~~--~~~~~~~~~la~~l~~~~-~---~~~--v~f~~SGse 104 (395)
T PRK03715 36 KRYLDFIQGWAVNCLGH--CNPGMVEALAAQAEK-LINPSP--AFYNEPMAKLAGLLTQHS-C---FDK--VFFANSGAE 104 (395)
T ss_pred CEEEECCcChhhccCCC--CCHHHHHHHHHHHHh-cccccc--cccCHHHHHHHHHHhhcc-C---CCE--EEEeCCcHH
Confidence 45688876522111121 24566666543 321 122221 123456777888875432 1 123 578999999
Q ss_pred HHHHHHHHHhhhC----CC-CeEEEcCCCCcchHH-HHHhcCceeeEeeecc-CCCC----CCChHHHHHHHHcCCCCeE
Q 047180 130 ACRLFADFQKRFH----PD-SQIYIPVPTWSNHHN-IWRDAHVTQRTFHYYH-PGTK----GLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 130 al~~~~~~l~~~~----pg-d~Vlv~~P~y~~y~~-~~~~~G~~~~~~~~~~-~~~~----~~d~~~l~~~l~~~~~~~~ 198 (337)
|...++.+...+. +| .+|+..+..|..... .+...|.......+.. ..++ -.|++.+++.+.+ ....
T Consensus 105 A~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~aa 182 (395)
T PRK03715 105 ANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITD--KTVA 182 (395)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCC--CceE
Confidence 9999887765321 23 679999999988643 3334443211111100 0011 1367888877742 2334
Q ss_pred EEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch-HHHHHhhhcCCeEEEEeccccccccc
Q 047180 199 FLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA-KAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 199 ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
+++ ...++..|.. .+++.+++|.++|+++|+++|.||++.+|.. ... .....+ ...+++ .+|||.+| .
T Consensus 183 vi~-Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GR----tG~~~a~~~~-gv~PDi---~t~gK~lg-~ 252 (395)
T PRK03715 183 VML-EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGR----TGTLFAYELS-GIEPDI---MTLGKGIG-G 252 (395)
T ss_pred EEE-eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCC----CcchhhHhhc-CCCCce---eeehhhhh-C
Confidence 444 4344444554 4799999999999999999999999998731 111 111111 112333 46799999 5
Q ss_pred ccccceeEe
Q 047180 277 GQRVGCLSV 285 (337)
Q Consensus 277 G~RvG~~~~ 285 (337)
|+-+|.+++
T Consensus 253 G~p~~av~~ 261 (395)
T PRK03715 253 GVPLAALLA 261 (395)
T ss_pred CcceEEEEE
Confidence 888998865
No 276
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=98.72 E-value=2.2e-06 Score=84.09 Aligned_cols=188 Identities=11% Similarity=0.072 Sum_probs=106.4
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCc-------------eeeEeeeccCCC--CC-CC-
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHV-------------TQRTFHYYHPGT--KG-LD- 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~-------------~~~~~~~~~~~~--~~-~d- 182 (337)
+..+++|++|...++.+........+|+...-+|.+... .+...|. .++.+|..+... +. .+
T Consensus 106 v~f~~SGseA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 185 (445)
T PRK08593 106 VTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDA 185 (445)
T ss_pred EEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcH
Confidence 568899999999988765433223578888888888643 3323321 122233211100 00 01
Q ss_pred ------hHHHHHHHHcC--CCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 183 ------FAALMDDIKNA--PNGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 183 ------~~~l~~~l~~~--~~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
++.+++.+... +.....+|.-..+...|.+ .+++.+++|.++|+++|+++|.||++.+|... ......
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~Grt---G~~~a~ 262 (445)
T PRK08593 186 NFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRT---GKWSSI 262 (445)
T ss_pred HHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcC---chHHHH
Confidence 13344434321 1233444445566677876 79999999999999999999999999887321 111111
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHh
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTIL 323 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l 323 (337)
..+ ...+++ .+|||.++ .|+++|++++ ++++.+.+.. .....+++ .+.+++.++...|
T Consensus 263 ~~~-gv~pDi---~t~gK~l~-~G~p~gav~~---~~~i~~~~~~---~~~~~T~~-~~pl~~aaa~a~l 320 (445)
T PRK08593 263 SHF-NITPDL---MSFGKSLA-GGMPMSAIVG---RKEIMESLEA---PAHLFTTG-ANPVSCAAALATI 320 (445)
T ss_pred Hhc-CCCCCE---eeeccccc-CCcccEEEEE---cHHHHhhhcc---CCCCCCCC-CCHHHHHHHHHHH
Confidence 111 112333 37899999 6899999875 4555444421 11112333 3445555555544
No 277
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=98.69 E-value=7.5e-07 Score=86.86 Aligned_cols=156 Identities=15% Similarity=0.007 Sum_probs=103.5
Q ss_pred ceeEEeeccchhHHHHHHHHHhhh------CCC-----CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHH
Q 047180 118 RIAAVQSLSGTGACRLFADFQKRF------HPD-----SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAAL 186 (337)
Q Consensus 118 ~i~~~~t~g~~~al~~~~~~l~~~------~pg-----d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l 186 (337)
.+...+|.||++|..+++...... ..| ..|+++.-..+.....++..|.+++.+|+. ++++.+|++.|
T Consensus 101 ~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d-~~~~~vd~~~L 179 (431)
T TIGR01788 101 EAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMD-PGRYVIDPEQV 179 (431)
T ss_pred CCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecC-CCceeeCHHHH
Confidence 344566899999988876443210 011 368888888888888888899999999883 33457999999
Q ss_pred HHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc------CceeEEcccCCCCCCCCCccchHHHHHhhhcC
Q 047180 187 MDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK------GHFPFFDMAYQGFASGDPERDAKAIRIFLKDG 260 (337)
Q Consensus 187 ~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~------~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 260 (337)
++.+.+ + +.+|+..-.||.||.+-+ +++|+++|+++ ++++.+|-+|.++... +....... .+...+
T Consensus 180 ~~~i~~--~-t~lV~~t~g~t~tG~idp---i~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p-~~~~~~~~-~~~~~~ 251 (431)
T TIGR01788 180 VEAVDE--N-TIGVVCILGTTYTGEYED---VKALNDALDEYNAKTGWDIPIHVDAASGGFIAP-FVYPDLEW-DFRLPR 251 (431)
T ss_pred HHHHhh--C-CeEEEEEeCCCCCcccCC---HHHHHHHHHHHHhhhCCCceEEEecccHHHHHH-HhCCCchh-hcCCCC
Confidence 999873 3 345555779999999977 45677778888 8999999999864310 00000001 111111
Q ss_pred CeEEEEecccccc-cccccccceeEe
Q 047180 261 HLLGLAQSYAKNM-GLYGQRVGCLSV 285 (337)
Q Consensus 261 ~~~i~~~S~SK~~-~~~G~RvG~~~~ 285 (337)
-..+ .-|.-|.+ +..| +|++++
T Consensus 252 ~DSi-s~s~HK~~~~P~g--~G~l~~ 274 (431)
T TIGR01788 252 VKSI-NVSGHKYGLVYPG--VGWVIW 274 (431)
T ss_pred ceEE-EECchhccCCCCC--cEEEEE
Confidence 2223 34677975 6544 788876
No 278
>PRK15029 arginine decarboxylase; Provisional
Probab=98.66 E-value=1e-06 Score=90.57 Aligned_cols=192 Identities=11% Similarity=0.036 Sum_probs=123.9
Q ss_pred CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEe
Q 047180 92 MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTF 171 (337)
Q Consensus 92 ~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~ 171 (337)
+.|.-.=-|..|..++|-+ + ..+.|+|++.++..+++.+.. +||+|+++.=+--.....+.+.|++++.+
T Consensus 203 p~G~I~eAq~~aA~~fgA~-------~-t~FlvNGST~gn~a~i~a~~~--~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl 272 (755)
T PRK15029 203 HTGAFGESEKYAARVFGAD-------R-SWSVVVGTSGSNRTIMQACMT--DNDVVVVDRNCHKSIEQGLILTGAKPVYM 272 (755)
T ss_pred CCcHHHHHHHHHHHHhCCC-------c-EEEEeCChhHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 4564433344444455543 2 257899999999888777666 99999999999998888999999998887
Q ss_pred eeccCCCC----CCC-----hHHHHHHHHcCCCCe--------EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 172 HYYHPGTK----GLD-----FAALMDDIKNAPNGS--------FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 172 ~~~~~~~~----~~d-----~~~l~~~l~~~~~~~--------~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
+-.- +.+ +++ ++.+++++++.+..+ .+++ .|| +=-|.++. +++|+++|.++++.|++
T Consensus 273 ~P~~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvl-t~P-TY~Gv~~d---i~~I~~~~h~~~~~llv 346 (755)
T PRK15029 273 VPSR-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVV-TNC-TYDGVCYN---AKEAQDLLEKTSDRLHF 346 (755)
T ss_pred cccc-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEE-ECC-CCcceeeC---HHHHHHHHHhcCCeEEE
Confidence 4311 222 234 889999987765433 4444 444 55799986 56788999999999999
Q ss_pred cccCCCCCCCCCccchHHHHHh-----hhcCCeEEEEecccccccccccccceeEeeeCCH--HHHHHHHHHHHhh
Q 047180 235 DMAYQGFASGDPERDAKAIRIF-----LKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE--KQAVAVKSQLQQL 303 (337)
Q Consensus 235 De~Y~~~~~~~~~~~~~~~~~~-----~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~--~~~~~~~~~l~~~ 303 (337)
||||..... |....+....+ ...+...+++.|.=|+.+ ++.-|.++-...+. -..+++...+...
T Consensus 347 DEAhGah~~--F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~--alTQaS~LHv~~~~~~id~~r~~~~l~~~ 418 (755)
T PRK15029 347 DEAWYGYAR--FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLN--ALSQASYIHVREGRGAINFSRFNQAYMMH 418 (755)
T ss_pred ECccccccc--cCccccccccccccccccCCCceEEEEchhhccc--chhhhhhheeCCCccccCHHHHHHHHHHH
Confidence 999976431 21111110112 112345688999999985 66666554332221 1135566655543
No 279
>PLN02263 serine decarboxylase
Probab=98.65 E-value=3.9e-07 Score=88.96 Aligned_cols=180 Identities=13% Similarity=0.013 Sum_probs=122.5
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~ 173 (337)
+..++-+.+.+|+.+--+ ++++.....+|.||+++..+++.+-.+..+...+++++-+-..+..+++..|.+++.+|.
T Consensus 130 ~s~~~E~~Vi~wla~L~g--~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~ 207 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWE--IEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDT 207 (470)
T ss_pred hHHHHHHHHHHHHHHHhC--CCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEecc
Confidence 456777778888643211 222222357899999998887766555445568899999888899999999999999998
Q ss_pred ccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCc-----eeEEcccCCCCCCCCCcc
Q 047180 174 YHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGH-----FPFFDMAYQGFASGDPER 248 (337)
Q Consensus 174 ~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~-----~ii~De~Y~~~~~~~~~~ 248 (337)
++ ++.+|++.|++++.+...++++|+-+-+.-+||++ +.+++|.++|+++++ |+-+|-+|.++.-. +.+
T Consensus 208 -d~-~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lP-f~~ 281 (470)
T PLN02263 208 -LV-SGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMP-FVK 281 (470)
T ss_pred -CC-CCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhh-hcc
Confidence 33 68999999999887543345666556788899998 667888899999986 99999999887521 111
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
..+.+. +.. .-..|. -+.=|..+. -.-.|.+.+
T Consensus 282 ~~~~~d-f~~-~vDSIs-vD~HK~l~~-P~~cgvll~ 314 (470)
T PLN02263 282 RAPKVT-FKK-PIGSVS-VSGHKFVGC-PMPCGVQIT 314 (470)
T ss_pred cccccC-CCc-CccEEE-ECCccccCC-CcCEEEEEE
Confidence 110000 110 111222 355687764 466777665
No 280
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=98.64 E-value=9.3e-07 Score=83.78 Aligned_cols=173 Identities=17% Similarity=0.124 Sum_probs=111.3
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh----cCceeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD----AHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~----~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
.+....|..|+..++..|.. +|+.++..+..|..-...++. .|.+...+.+ -|++++++++.+ +.
T Consensus 95 ~l~fsSGmaA~~~al~~L~~--~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~-------~~~~~~~~~i~~--~t 163 (409)
T KOG0053|consen 95 ALLFSSGMAAITVALLHLLP--AGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV-------DDLKKILKAIKE--NT 163 (409)
T ss_pred EEEecccHHHHHHHHHHhcC--CCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech-------hhHHHHHHhhcc--Cc
Confidence 46778888888888877665 899999999999998776654 4444443322 246677776652 34
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
++++ +=+|.||++.+.. +++|+++|+++|++||+|+.+...... + ++. + + -=|++.|.+|.+|=.
T Consensus 164 ~~V~-~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~----~--pL~-l---G-ADIV~hSaTKyi~Gh 228 (409)
T KOG0053|consen 164 KAVF-LESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ----D--PLP-L---G-ADIVVHSATKYIGGH 228 (409)
T ss_pred eEEE-EECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc----C--hhh-c---C-CCEEEEeeeeeecCC
Confidence 4444 4899999999976 556777777999999999998776421 1 121 1 1 127889999999744
Q ss_pred ccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+-=+|=+++. .+++..++++. +....-.+++.+......+=|.
T Consensus 229 sdvi~G~iv~-n~~~~~~~l~~----~~~~lg~~~~p~~~~ll~Rglk 271 (409)
T KOG0053|consen 229 SDVIGGSVVL-NSEELASRLKF----LQEDLGWCEDPFDLFLLSRGLK 271 (409)
T ss_pred cceeeeEEec-CcHHHHHHHHH----HHHHhcCCCCHHHHHHHhcCcc
Confidence 4434433332 34665555544 2222333566555544443333
No 281
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=98.61 E-value=1.9e-06 Score=84.42 Aligned_cols=155 Identities=16% Similarity=0.090 Sum_probs=96.4
Q ss_pred EeeccchhHHHHHHHHHhhhCC-------------------------------CCeEEEcCCCCcchHHH---HHhcC--
Q 047180 122 VQSLSGTGACRLFADFQKRFHP-------------------------------DSQIYIPVPTWSNHHNI---WRDAH-- 165 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~p-------------------------------gd~Vlv~~P~y~~y~~~---~~~~G-- 165 (337)
++..+|+.|...+...+.. | ||+|+-.++.-+.+... ....|
T Consensus 115 vqp~Sg~~An~~v~~all~--~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~ 192 (493)
T PRK13580 115 VQPHSGADANLVAFWAILA--HKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKM 192 (493)
T ss_pred ccCCCcHHHHHHHHHHHhc--ccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhhe
Confidence 5677888887777766664 4 79999998887666332 11222
Q ss_pred ceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC-CCCC
Q 047180 166 VTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG-FASG 244 (337)
Q Consensus 166 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~-~~~~ 244 (337)
.+.+.|++ +.++..+|++++++.+.. .++.+++....++ ++ .. .+++|.++|+++|.+++.|+++.- +..+
T Consensus 193 ~~~~~y~v-d~~~g~iD~d~l~~~~~~--~~plvii~g~S~~-~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg 264 (493)
T PRK13580 193 FHQRSYGV-DPDTGLLDYDEIAALARE--FKPLILVAGYSAY-PR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAG 264 (493)
T ss_pred eeeEeccc-CcccCccCHHHHHHHHhh--cCCEEEEeCcccc-CC-Cc---CHHHHHHHHHHcCCEEEEECchhhceecc
Confidence 56677777 334578999999998874 3445555444444 33 54 477888889999999999998752 2211
Q ss_pred CCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 245 DPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+.. ......+ .+.+ +++.|++|++. |-+-|++++ ++++++.+
T Consensus 265 ~~~--~~~~~~~--~~~D-~vtgT~hKaL~--GP~GG~I~~---~~~l~~~L 306 (493)
T PRK13580 265 KVF--TGDEDPV--PHAD-IVTTTTHKTLR--GPRGGLVLA---KKEYADAV 306 (493)
T ss_pred ccc--hhhcCCC--CCCc-EEEeCChhhcc--CCCeEEEEe---cHHHHHHH
Confidence 110 0000001 1112 67799999983 334588765 45554444
No 282
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=98.60 E-value=5.6e-07 Score=87.24 Aligned_cols=140 Identities=16% Similarity=0.065 Sum_probs=94.1
Q ss_pred EEeeccchhHHHHHHHHHhhhCCC---CeEEEcCCCCcc--h--HHHHHhcCcee----eEeeeccCCCCCCChHHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPD---SQIYIPVPTWSN--H--HNIWRDAHVTQ----RTFHYYHPGTKGLDFAALMDD 189 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pg---d~Vlv~~P~y~~--y--~~~~~~~G~~~----~~~~~~~~~~~~~d~~~l~~~ 189 (337)
++.|.|+++++.+++..+.. ++ +.|++....|+. | ...++..|.++ +.++. ..++.+|++.+++.
T Consensus 89 v~~~~~~t~~l~~~~~~~~~--~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~ 164 (406)
T TIGR01814 89 VVVMNTLTINLHLLLASFYK--PTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDT 164 (406)
T ss_pred EEEeCCchHHHHHHHHHhcC--CcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHH
Confidence 47899999999998876533 43 368888899987 3 22345678886 34443 22456788999887
Q ss_pred HHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecc
Q 047180 190 IKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSY 269 (337)
Q Consensus 190 l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 269 (337)
+....+++.+++++.++|.||.+.+ +++|+++|+++|+++++|++.. +..-+++ +...+. -+++.|.
T Consensus 165 ~~~~~~~t~lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~-~G~~~id--------~~~~gv-D~~~~s~ 231 (406)
T TIGR01814 165 IEKNGDDIAVILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHA-VGNVPLD--------LHDWGV-DFACWCT 231 (406)
T ss_pred HHhcCCCeEEEEEeccccccceecC---HHHHHHHHHHcCCEEEEEcccc-cCCcccc--------cccCCC-CEEEEcC
Confidence 7543234555656889999999997 7778889999999999998754 2110011 111122 3566788
Q ss_pred cccc-cccc
Q 047180 270 AKNM-GLYG 277 (337)
Q Consensus 270 SK~~-~~~G 277 (337)
-|.+ |-||
T Consensus 232 hK~l~g~pG 240 (406)
T TIGR01814 232 YKYLNAGPG 240 (406)
T ss_pred ccccCCCCC
Confidence 8986 3455
No 283
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=98.57 E-value=1e-06 Score=81.71 Aligned_cols=159 Identities=16% Similarity=0.063 Sum_probs=115.8
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH----HHHHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH----NIWRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~----~~~~~~G~~~~~ 170 (337)
...|-+.|+..--| +..+.+.+|+.|+.+++.-+.. +||.|+-.+--|.+-. ..++..|.++..
T Consensus 64 ~~vlE~RiAaLEGG----------~aa~a~aSG~AA~~~ai~~la~--aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~f 131 (426)
T COG2873 64 TDVLEERIAALEGG----------VAALAVASGQAAITYAILNLAG--AGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRF 131 (426)
T ss_pred HHHHHHHHHHhhcc----------hhhhhhccchHHHHHHHHHhcc--CCCeeEeeccccCchHHHHHHHHHhcCcEEEE
Confidence 34577777775322 2246788899999988877777 9999999988887754 455778988877
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
+. ..|++.+++++.+ +++.+++ =+-.||-+.++. +++|+++|+++++.+|+|..+..=
T Consensus 132 vd-------~~d~~~~~~aI~~--nTkavf~-EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atp--------- 189 (426)
T COG2873 132 VD-------PDDPENFEAAIDE--NTKAVFA-ETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATP--------- 189 (426)
T ss_pred eC-------CCCHHHHHHHhCc--ccceEEE-EeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcc---------
Confidence 63 2468999999873 4556665 678999999986 778999999999999999865431
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
.-++++.. + -=|++.|.||..|=.|--+|=+++-+++
T Consensus 190 yl~rP~~h-G-ADIVvHS~TK~igGhGt~iGG~iVD~G~ 226 (426)
T COG2873 190 YLCRPIEH-G-ADIVVHSATKYIGGHGTAIGGVIVDGGK 226 (426)
T ss_pred eecchhhc-C-CCEEEEeecccccCCccccceEEEeCCc
Confidence 01222211 1 2377899999998889999988875443
No 284
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=98.53 E-value=1.2e-05 Score=78.97 Aligned_cols=188 Identities=14% Similarity=0.064 Sum_probs=103.9
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH-HHhcCce-------------eeEeeeccCCC--CC-CC-
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI-WRDAHVT-------------QRTFHYYHPGT--KG-LD- 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~-~~~~G~~-------------~~~~~~~~~~~--~~-~d- 182 (337)
+..+++|++|...++.+.......++|+...-+|.+.... +...|.. +..+|..+... +. -|
T Consensus 118 v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (441)
T PRK05769 118 VFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENP 197 (441)
T ss_pred EEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCch
Confidence 5789999999999887654432346888888888886532 2332211 22222211000 00 01
Q ss_pred -------hHHHHHHH-Hc--CCCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchH
Q 047180 183 -------FAALMDDI-KN--APNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 183 -------~~~l~~~l-~~--~~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
++.+++.+ .. .+.....++.=.-+.-.|. ..+++.|++|.++|+++|+++|.||++.+|... . ...
T Consensus 198 ~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~-G--~~~ 274 (441)
T PRK05769 198 EECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRT-G--KMF 274 (441)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc-c--cee
Confidence 23344422 21 1223333332222333455 467899999999999999999999999987321 0 011
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
....+ ...++++ +|||.++ .|+++|++++ ++++. ..+......++++ +.+++.++..+|+
T Consensus 275 a~~~~-gv~pDiv---t~~K~l~-~G~p~gav~~---~~~i~----~~~~~~~~~T~~g-~p~~~aaa~a~L~ 334 (441)
T PRK05769 275 AIEHF-GVEPDII---TLAKAIA-GGLPLGAVIG---RAELM----FLPPGSHANTFGG-NPVAAAAALATLE 334 (441)
T ss_pred hhhcc-CCCCCEE---EEccccc-CCcccEEEEE---ehhhh----hcCCCCCCCCCCc-CHHHHHHHHHHHH
Confidence 11111 1123444 4899999 7999999875 33332 2122223344543 5566766666654
No 285
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.52 E-value=1.6e-05 Score=77.69 Aligned_cols=163 Identities=15% Similarity=0.106 Sum_probs=99.4
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCceeeE--------eee-ccCCC---CCCChHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHVTQRT--------FHY-YHPGT---KGLDFAALM 187 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~~~~~--------~~~-~~~~~---~~~d~~~l~ 187 (337)
+..+++|++|...++.+...+....+|+...=+|.+... .+...|..... ++- ..++. .--|++.++
T Consensus 112 v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 191 (428)
T PRK12389 112 VRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALK 191 (428)
T ss_pred EEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHH
Confidence 567999999999998766554334688888888888653 33333321110 000 00000 012678888
Q ss_pred HHHHcCCCCe-EEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE
Q 047180 188 DDIKNAPNGS-FFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL 265 (337)
Q Consensus 188 ~~l~~~~~~~-~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (337)
+.+....... .+++=+ -+.-.|.+ .+++.|++|.++|+++|+++|.||+..+|..+ + ......+ ...+++
T Consensus 192 ~~l~~~~~~vaavi~EP-v~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~-~---~~a~~~~-gv~PDi-- 263 (428)
T PRK12389 192 EALDKWGDEVAAVLVEP-IVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFM-Y---GGAQDLL-GVEPDL-- 263 (428)
T ss_pred HHHHhcCCcEEEEEEeC-CCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccC-c---chhhHHh-CCCCCe--
Confidence 8886433333 444433 34445654 57889999999999999999999999887322 1 0011111 112344
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHH
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
.+|+|.+| .|+-+|.+++ ++++.+.+
T Consensus 264 -vt~gK~lg-gG~Pi~av~~---~~~i~~~~ 289 (428)
T PRK12389 264 -TALGKIIG-GGLPIGAYGG---RKDIMEQV 289 (428)
T ss_pred -eeechhhc-CCCceeEEeE---HHHHHhhh
Confidence 36799998 6899998864 45554444
No 286
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=98.49 E-value=1.9e-05 Score=77.97 Aligned_cols=163 Identities=17% Similarity=0.130 Sum_probs=97.3
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH-HhcCcee--e------Eeeec-cCC----CCCCChHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW-RDAHVTQ--R------TFHYY-HPG----TKGLDFAAL 186 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~-~~~G~~~--~------~~~~~-~~~----~~~~d~~~l 186 (337)
+..+++|++|...++++...+...++|+...=+|.+....+ ...+... . .+|.. ..+ .+ -|++.+
T Consensus 158 v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l 236 (474)
T PLN02482 158 VRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAV 236 (474)
T ss_pred EEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHH
Confidence 46789999999999876654433468888888888864221 1111000 0 00100 000 01 167888
Q ss_pred HHHHHcCCCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE
Q 047180 187 MDDIKNAPNGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL 265 (337)
Q Consensus 187 ~~~l~~~~~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (337)
++.+...+.....+|.-.-..-.|.+ .+++.|++|.++|+++|+++|.||+..+|..+. ......+ ...+++
T Consensus 237 ~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGfR~g~----~ga~~~~-gv~PDi-- 309 (474)
T PLN02482 237 KKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGFRIAY----GGAQEYF-GITPDL-- 309 (474)
T ss_pred HHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCeecCc----chHhHHh-CCCCCE--
Confidence 88886543333333333233335654 458899999999999999999999998874321 1111111 112344
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHH
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
.+|+|.+| .|+-+|.+++ +.++.+.+
T Consensus 310 -~t~gK~lg-gG~Pigav~g---~~ei~~~~ 335 (474)
T PLN02482 310 -TTLGKVIG-GGLPVGAYGG---RREIMEMV 335 (474)
T ss_pred -EEecchhh-CCCceEEEEE---cHHHHHhh
Confidence 36799999 7999999854 45554443
No 287
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=98.47 E-value=7.1e-06 Score=74.07 Aligned_cols=203 Identities=15% Similarity=0.114 Sum_probs=122.9
Q ss_pred cchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEE
Q 047180 70 VLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIY 148 (337)
Q Consensus 70 ~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vl 148 (337)
|-.++++|+... ..+..+++-| -...|-+.+|+. +|+. . ..+++.|..+-+-.++.-+.+ +|.+|+
T Consensus 34 PTdeMr~am~eA~vgDdVyGeD~--tt~rLE~~vA~l-~GKE------A--gLFv~SGTmgNllaIm~Hc~~--rg~eii 100 (384)
T KOG1368|consen 34 PTDEMRRAMAEASVGDDVYGEDP--TTNRLEQRVAEL-FGKE------A--GLFVPSGTMGNLLAIMVHCHQ--RGSEII 100 (384)
T ss_pred ChHHHHHHHhhcccCcccccCCc--cHHHHHHHHHHH-hCcc------c--eeeecccccccHHHHHHHhcC--CCceEE
Confidence 345677776654 3344555544 456788888885 4542 1 124444555555444444444 899999
Q ss_pred EcCCCCcc-hH--HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC-----CCeEEEEeCCCCCCCC-CCCCHHHHH
Q 047180 149 IPVPTWSN-HH--NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP-----NGSFFLLHACAHNPTG-VDPSEEQWK 219 (337)
Q Consensus 149 v~~P~y~~-y~--~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-----~~~~ili~~~p~NPTG-~~~s~~~~~ 219 (337)
+-+-.--- |+ .+....|..+.++. ++++.-+|+++++.++.... +.+.++++-|-||-+| .+++.++++
T Consensus 101 ~gd~~HI~~~E~gg~s~l~gv~~~tv~--~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~ 178 (384)
T KOG1368|consen 101 VGDRAHIHRYEQGGISQLAGVHVRTVK--NENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELD 178 (384)
T ss_pred eccchheeehhccChhhhccceeEeee--eCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHH
Confidence 98754321 22 23445666666553 45567899999999987311 1234444455566666 999999999
Q ss_pred HHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHH
Q 047180 220 EISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 220 ~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
++.++|++|++-+-.|-+-..-+. ... ..+++.+.+..+.+-+| |||.+|.| +|-+++ ++.+.+++.+
T Consensus 179 ~v~~lak~~glkLH~DGARi~NAa--vas-gV~vk~i~~~fDSVsiC--LSKglgAP---VGSViV--G~k~FI~kA~ 246 (384)
T KOG1368|consen 179 RVKALAKRHGLKLHMDGARIFNAA--VAS-GVPVKKICSAFDSVSIC--LSKGLGAP---VGSVIV--GSKDFIDKAR 246 (384)
T ss_pred HHHHHHhccCCeeecchhhhhhHH--HHc-CCCHHHHHHhhhhhhhh--hhccCCCC---cccEEE--ccHHHHHHHH
Confidence 999999999999999976422110 000 11222222222333333 78998876 999987 6777666543
No 288
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=98.46 E-value=2.5e-05 Score=76.50 Aligned_cols=164 Identities=13% Similarity=0.074 Sum_probs=95.7
Q ss_pred EEeeccchhHHHHHHHHHhhhC---CCCeEEEcCCCCcchHH-HHHhcCceee---EeeeccCCC--CCCChHHHHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFH---PDSQIYIPVPTWSNHHN-IWRDAHVTQR---TFHYYHPGT--KGLDFAALMDDIK 191 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~---pgd~Vlv~~P~y~~y~~-~~~~~G~~~~---~~~~~~~~~--~~~d~~~l~~~l~ 191 (337)
++.+++|++|..+++.+..... ...+|+...-.|.+... .+...|.... ..|+...-. .-.|.+.+++.++
T Consensus 137 v~f~~SGsEA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~ 216 (442)
T TIGR03372 137 SFFCNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALN 216 (442)
T ss_pred EEEeCCchHHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHH
Confidence 4678999999999987655432 23679999999988653 3333332111 011100000 0125666666664
Q ss_pred c---CCCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHHHhhhcCCeEEEE
Q 047180 192 N---APNGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIRIFLKDGHLLGLA 266 (337)
Q Consensus 192 ~---~~~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~ 266 (337)
. .+.+...+|.-+-+---|.. .+++-+++|.++|+++|+++|.||+..+|. .| ..+....+ ...++++
T Consensus 217 ~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG----~~~a~e~~-gv~PDiv-- 289 (442)
T TIGR03372 217 ECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTG----KMFACEHE-GVQPDIL-- 289 (442)
T ss_pred HHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccc----cchhhhhc-CCCCCee--
Confidence 2 22233333333233334554 578899999999999999999999998773 11 11111111 1123443
Q ss_pred ecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 267 QSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 267 ~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
+|||.+| .| +-+|.+++ .+++.+.+
T Consensus 290 -t~gK~lg-~G~~Pigavv~---~~~i~~~~ 315 (442)
T TIGR03372 290 -CLAKALG-GGVMPIGATIA---TEAVFSVL 315 (442)
T ss_pred -eehhhhc-CCcccceEEEe---cHHHHHhh
Confidence 3899998 68 68998875 35554444
No 289
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=98.42 E-value=2.8e-05 Score=76.62 Aligned_cols=214 Identities=13% Similarity=0.065 Sum_probs=116.5
Q ss_pred chhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCC---CCC------HH-HHHHHHHH
Q 047180 37 PILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPM---GGS------VK-MVEETLKL 105 (337)
Q Consensus 37 ~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~---~G~------~~-lr~aia~~ 105 (337)
.+.++...-.. ...+.|+|...+ -..+|.+.+++... ......+|+.+ .|. .+ .|+.++++
T Consensus 21 ~~~~~~~~~~~-~~~~~l~l~~se-------n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~l 92 (452)
T PTZ00094 21 ELYELIEKEKE-RQIEGLELIASE-------NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEA 92 (452)
T ss_pred HHHHHHHHHHH-HHHcCeeEeccc-------ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHH
Confidence 45555543222 124578888764 23567777776542 11111122221 232 11 33455555
Q ss_pred HhCCCCcccccCce-eEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh----------cCceeeEeeec
Q 047180 106 AYGDNSEFIKDKRI-AAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD----------AHVTQRTFHYY 174 (337)
Q Consensus 106 ~~~~~~~~~~~~~i-~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~----------~G~~~~~~~~~ 174 (337)
+ +-. ++.+ ..+.+.+|+.+..+++..+.+ |||+|++.....+.+...... .+.+++.++.
T Consensus 93 f-~a~-----~~~~~~~~~~~sgt~an~~v~~al~~--~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~- 163 (452)
T PTZ00094 93 F-GLD-----PEEWGVNVQPYSGSPANFAVYTALLQ--PHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQV- 163 (452)
T ss_pred h-CCC-----cccceeecCCCchHHHHHHHHHHhcC--CCCEEEecccccCCcccccccccccccccceeeeeeeeccc-
Confidence 4 321 2221 112336788888877766655 899999977666655432211 1123344444
Q ss_pred cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC-CCCCCCccchHHH
Q 047180 175 HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG-FASGDPERDAKAI 253 (337)
Q Consensus 175 ~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~-~~~~~~~~~~~~~ 253 (337)
+. +..+|++++++.+.+.. .+++++ . ++.+|...+ +++|.++|+++|+++++|++..- ....+... .+
T Consensus 164 ~~-~g~id~~~L~~~l~~~~-~~lvi~-~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~--~~- 232 (452)
T PTZ00094 164 NE-KGLIDYDKLEELAKAFR-PKLIIA-G--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLP--SP- 232 (452)
T ss_pred CC-CCCcCHHHHHHHHHHhC-CCEEEE-e--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCC--CC-
Confidence 22 46789999999986432 234443 2 344998777 55677888999999999998642 22111100 00
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+. +. =+++.|..|+++ |-+-|++++
T Consensus 233 --~~--~~-D~l~~S~hK~l~--GP~Gg~l~~ 257 (452)
T PTZ00094 233 --FP--YA-DVVTTTTHKSLR--GPRSGLIFY 257 (452)
T ss_pred --CC--CC-cEEEcCCccCCC--CCCceEEEE
Confidence 11 11 266789999873 333477765
No 290
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=98.41 E-value=1.3e-05 Score=84.98 Aligned_cols=138 Identities=11% Similarity=0.038 Sum_probs=99.4
Q ss_pred CCCCCCCC---CCCH----HHHHHHHHHHhCCCCcccccCceeEEeeccch----hHHHHHHHHHhhhCCCC----eEEE
Q 047180 85 ANMEYLPM---GGSV----KMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT----GACRLFADFQKRFHPDS----QIYI 149 (337)
Q Consensus 85 ~~~~Y~~~---~G~~----~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~----~al~~~~~~l~~~~pgd----~Vlv 149 (337)
..|-|.|. +|+. ++|+.+++++ +- +. ++.+.+++ .++.+++..+.+ .+|| +|++
T Consensus 553 ~~hp~~p~~~~~g~~~~~~~~r~~la~i~-g~-------~~--v~f~pnaga~ge~a~~~vi~~~~~-~~Gd~~r~~vli 621 (993)
T PLN02414 553 NIHPFAPVDQAQGYQEMFEDLGDLLCEIT-GF-------DS--FSLQPNAGAAGEYAGLMVIRAYHL-SRGDHHRNVCII 621 (993)
T ss_pred hcCCCCCHHHHHHHHHHHHHHHHHHHHHh-CC-------Ce--EEEcCCCcHHHHHHHHHHHHHHHh-ccCCCCCCEEEe
Confidence 35666663 4544 4555555544 32 23 34565555 677777766644 1387 8999
Q ss_pred cCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC
Q 047180 150 PVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKG 229 (337)
Q Consensus 150 ~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~ 229 (337)
+.-.-......+...|.+++.+|+ ++ +..+|+++|++.++++.++..+|++.+|+|=+|... .+++|+++|+++|
T Consensus 622 ~~~aH~sn~a~a~~~G~~vv~v~~-d~-~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~---~I~eI~~iah~~G 696 (993)
T PLN02414 622 PVSAHGTNPASAAMCGMKIVVVGT-DA-KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEE---GIDEICDIIHDNG 696 (993)
T ss_pred CCCcCccCHHHHHHCCCEEEEecc-CC-CCCcCHHHHHHHHhccCCCeEEEEEECCCccccccc---hHHHHHHHHHHcC
Confidence 998888888888889999999998 33 468999999999975333345555578999999874 4788999999999
Q ss_pred ceeEEcccC
Q 047180 230 HFPFFDMAY 238 (337)
Q Consensus 230 ~~ii~De~Y 238 (337)
.+++.|-+.
T Consensus 697 alv~vDgAq 705 (993)
T PLN02414 697 GQVYMDGAN 705 (993)
T ss_pred CEEEEEecC
Confidence 999999876
No 291
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=98.40 E-value=3.6e-05 Score=75.62 Aligned_cols=183 Identities=14% Similarity=0.043 Sum_probs=123.4
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhC---CC---C------eEEEcCCCCcchHHHH
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFH---PD---S------QIYIPVPTWSNHHNIW 161 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~---pg---d------~Vlv~~P~y~~y~~~~ 161 (337)
+..++=+.+.+|+..-.. .+ +.....+|.||+++..+++.+..+.. .+ . +|+++.=.-..+...+
T Consensus 98 ~a~~~E~~~v~~l~~l~~--~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa 174 (460)
T COG0076 98 AAAELEERVVNMLSDLLG--AP-EEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAA 174 (460)
T ss_pred hHHHHHHHHHHHHHHHhC--CC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHH
Confidence 566677777777633211 11 22346789999999887775554321 11 1 6888888888899999
Q ss_pred HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 162 RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 162 ~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
+..|.+...+|+... ++.+|++++++++.+.....+|+. .-+.-|||.+ +.+++|+++|+++++++.+|-+|.++
T Consensus 175 ~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~-~aGtT~~G~i---Ddi~~ia~ia~~~~i~lHVDAA~GG~ 249 (460)
T COG0076 175 RYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVG-TAGTTDTGSI---DDIEELADIAEEYGIWLHVDAAFGGF 249 (460)
T ss_pred HHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEE-EecCCCCCcc---CCHHHHHHHHHHcCCcEEEEccccce
Confidence 999999999998443 689999999999986322211333 4578889986 77899999999999999999999998
Q ss_pred CCCCCccchHHHHHhhhcCCeEEEE-ecccccccccccccceeEeeeCCHH
Q 047180 242 ASGDPERDAKAIRIFLKDGHLLGLA-QSYAKNMGLYGQRVGCLSVLCEDEK 291 (337)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~i~~-~S~SK~~~~~G~RvG~~~~~~~~~~ 291 (337)
.-. |.+.. .. +...-+.+-.+ -++=|... +=.-.||+++ +|++
T Consensus 250 ~~p-f~~~~--~~-~~f~l~~vdSIt~d~HK~g~-aP~~~G~il~--rd~e 293 (460)
T COG0076 250 LLP-FLEPD--GR-WDFGLEGVDSITVDGHKYGL-APIGCGVVLF--RDEE 293 (460)
T ss_pred eec-ccCcc--ch-hhcCCCCceEEEECcccccC-CCCCceEEEE--ECHH
Confidence 632 21111 11 11111233332 46778654 4466888877 6774
No 292
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=98.39 E-value=3.5e-05 Score=76.23 Aligned_cols=143 Identities=17% Similarity=0.118 Sum_probs=83.0
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCC---CCcchHHHHH---hcCce----eeEeeeccCCCCCCChHHHHHHHH
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVP---TWSNHHNIWR---DAHVT----QRTFHYYHPGTKGLDFAALMDDIK 191 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P---~y~~y~~~~~---~~G~~----~~~~~~~~~~~~~~d~~~l~~~l~ 191 (337)
++...|+.|...++..|.. |||+|+..+. ++..+..... ..+.. +++|.. +.++..+|++++++.+.
T Consensus 104 v~~~SG~~AN~av~~aL~~--pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~-~~~~g~iD~d~Le~~l~ 180 (475)
T PLN03226 104 VQPLSGSPANFAVYTALLQ--PHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRL-DESTGLIDYDKLEKKAM 180 (475)
T ss_pred cCcCchHHHHHHHHHHhCC--CCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeee-cCCCCCcCHHHHHHHHh
Confidence 3456677777666666666 9999999653 2232222211 11121 113333 33467899999999886
Q ss_pred cCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEeccc
Q 047180 192 NAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQSYA 270 (337)
Q Consensus 192 ~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 270 (337)
+.+ .+++++ . .+| +|...+ +++|.++|+++|.+++.|+++. ++...+.. + ..+. ..+ +++.|++
T Consensus 181 ~~~-pklIv~-~-~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~----~-~p~~--~~D-iv~~t~h 245 (475)
T PLN03226 181 LFR-PKLIIA-G-ASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEA----A-SPFE--YCD-VVTTTTH 245 (475)
T ss_pred hcC-CeEEEE-e-cCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCC----C-CCCC--CCe-EEEecCc
Confidence 432 334443 2 344 666654 5578899999999999999764 23221110 0 0111 122 6678999
Q ss_pred ccc-cccccccceeEe
Q 047180 271 KNM-GLYGQRVGCLSV 285 (337)
Q Consensus 271 K~~-~~~G~RvG~~~~ 285 (337)
|++ |..| |++++
T Consensus 246 K~L~GP~G---g~I~~ 258 (475)
T PLN03226 246 KSLRGPRG---GMIFF 258 (475)
T ss_pred ccccCCCc---eEEEE
Confidence 999 5444 77664
No 293
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=98.39 E-value=8.6e-06 Score=83.18 Aligned_cols=194 Identities=14% Similarity=0.148 Sum_probs=118.0
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCcee
Q 047180 89 YLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQ 168 (337)
Q Consensus 89 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~ 168 (337)
.....|...=-|..|..+++-+ + ..+.|+|++.++..++.++.. +||.|+++.=+--.....+.+.|+++
T Consensus 190 Ll~~~G~i~eAe~~AA~~fgAd-------~-tyfvvNGTS~~n~av~~a~~~--~Gd~VLvdRN~HKSv~haLilsga~P 259 (714)
T PRK15400 190 LLDHSGPHKEAEEYIARVFNAD-------R-SYMVTNGTSTANKIVGMYSAP--AGSTVLIDRNCHKSLTHLMMMSDVTP 259 (714)
T ss_pred CCCCChHHHHHHHHHHHHhCCC-------c-EEEEeCchHHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHcCCeE
Confidence 3345565443444444455543 2 257899999999888877666 99999999998888888899999999
Q ss_pred eEeeeccCCCCC----CC-----hHHHHHHHHcCCCCe---EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 169 RTFHYYHPGTKG----LD-----FAALMDDIKNAPNGS---FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 169 ~~~~~~~~~~~~----~d-----~~~l~~~l~~~~~~~---~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
+.++... +.++ ++ .+.+++++.+.+..+ .+++ .|| +=-|.+++.+ +|++.|..++ |++||
T Consensus 260 VYl~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vi-t~p-TYdG~~yd~~---~I~~~~~~~~--ilvDE 331 (714)
T PRK15400 260 IYFRPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVI-TNS-TYDGLLYNTD---FIKKTLDVKS--IHFDS 331 (714)
T ss_pred EEecccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEE-ECC-CCccEecCHH---HHHHHhCCCC--EEEEc
Confidence 9875422 2332 34 789999998765433 3444 444 6679999865 5566666666 68999
Q ss_pred cCCCCC-CCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhh
Q 047180 237 AYQGFA-SGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQL 303 (337)
Q Consensus 237 ~Y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~ 303 (337)
||.... |.+.-.+..++...+...+.++++.|.=|..+ |+.=+.++-..++ -..+++.+.+...
T Consensus 332 Awgah~~F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~--alTQaS~LHvkg~-vd~~~~n~a~~m~ 396 (714)
T PRK15400 332 AWVPYTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVKGD-VNEETFNEAYMMH 396 (714)
T ss_pred cchhhhccCcccCCcChhhcCCCCCCceEEEEchhhccc--chhHHhHHHHcCC-CCHHHHHHHHHHH
Confidence 997653 21111111122111111245688899999874 5544433222121 1124555555543
No 294
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.39 E-value=4.1e-05 Score=74.88 Aligned_cols=164 Identities=16% Similarity=0.126 Sum_probs=94.9
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCceeeE----e--eeccCC--CCC-CChHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQRT----F--HYYHPG--TKG-LDFAALM 187 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~~~----~--~~~~~~--~~~-~d~~~l~ 187 (337)
+..+++|++|...++.+...+....+|+...-+|.+... .....+..... + +..... ... -|.+.++
T Consensus 113 v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~ 192 (433)
T PRK00615 113 IRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQ 192 (433)
T ss_pred EEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHH
Confidence 567899999999998765543223678888888888541 11111110000 0 000000 001 1678888
Q ss_pred HHHHcCCCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEE
Q 047180 188 DDIKNAPNGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLA 266 (337)
Q Consensus 188 ~~l~~~~~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (337)
+.+.....+...+|.-.-..=.|.. .+++.+++|.++|++||+++|.||++.+|..+ .......+ ...++++
T Consensus 193 ~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~R~G----~~ga~~~~-gv~PDi~-- 265 (433)
T PRK00615 193 TVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGFRVA----QGGAAAIY-HVKPDIT-- 265 (433)
T ss_pred HHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccccccc----HhHHHHhc-CCCCCeE--
Confidence 8886433333333322222323554 56889999999999999999999999887322 11111111 1123443
Q ss_pred ecccccccccccccceeEeeeCCHHHHHHH
Q 047180 267 QSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 267 ~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
.|||.+| .|+-+|++++ ++++.+.+
T Consensus 266 -~~gK~lg-gG~p~~av~~---~~~i~~~~ 290 (433)
T PRK00615 266 -VYGKILG-GGLPAAAVVA---HKSIMDHL 290 (433)
T ss_pred -EEccccc-CCcceeeeee---cHHHHhhh
Confidence 3899998 5788888775 45554443
No 295
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=98.36 E-value=2.9e-05 Score=74.25 Aligned_cols=151 Identities=16% Similarity=0.110 Sum_probs=94.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHh-cCceeeE---eeeccC---CCCCCChHHHHHHHHc
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRD-AHVTQRT---FHYYHP---GTKGLDFAALMDDIKN 192 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~-~G~~~~~---~~~~~~---~~~~~d~~~l~~~l~~ 192 (337)
++.+++|++|+..++.+.... .| ++|+...-+|......+-. .|..... -|.... ..+ .|.+.+++.+..
T Consensus 84 v~~~~SGseA~e~Alklar~~-~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-~d~~~l~~~i~~ 161 (364)
T PRK04013 84 VYMGNSGTEAVEAALKFARLY-TGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-NDVEAAKEAITK 161 (364)
T ss_pred EEEeCchHHHHHHHHHHHHHH-hCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-CCHHHHHHHhcC
Confidence 467899999999998776544 45 8999999999886533322 2211000 010000 011 256778877752
Q ss_pred CCCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccc
Q 047180 193 APNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAK 271 (337)
Q Consensus 193 ~~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 271 (337)
+...+++-+ -+.-.|. ..+++.|++|.++|+++|+++|.||+..+|..|.+ .....+ ...+++++ |+|
T Consensus 162 --~~aAvivEp-i~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~RtG~~----~a~~~~-gv~PDiv~---~gK 230 (364)
T PRK04013 162 --ETAAVIFEP-IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGLRTGKF----LAIEHY-KVEPDIVT---MGK 230 (364)
T ss_pred --CcEEEEEcC-CcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCCCch----hHHHhc-CCCCCEEE---ecc
Confidence 334555533 3333344 56788999999999999999999999988843321 111112 22244444 599
Q ss_pred cccccccccceeEe
Q 047180 272 NMGLYGQRVGCLSV 285 (337)
Q Consensus 272 ~~~~~G~RvG~~~~ 285 (337)
.+| .|+-+|.++.
T Consensus 231 ~lg-gG~P~~a~~~ 243 (364)
T PRK04013 231 GIG-NGVPVSLTLT 243 (364)
T ss_pred ccc-CCceeEEEEe
Confidence 999 5899998875
No 296
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=98.35 E-value=6.1e-06 Score=78.06 Aligned_cols=190 Identities=18% Similarity=0.067 Sum_probs=121.7
Q ss_pred cccchHHHHHHHHh------cCcCCCCCCC--CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHH--
Q 047180 68 PVVLECVREAERRI------AGTANMEYLP--MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADF-- 137 (337)
Q Consensus 68 ~~~~~~v~~a~~~~------~~~~~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~-- 137 (337)
.++.|.+.+++... ++...|.|+- .+...+-|+.||+.+ +- +++ +++.|.||+++..+++.-
T Consensus 11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll-ga-----~~~--eIiFTSG~TEsnNlaI~g~~ 82 (386)
T COG1104 11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL-GA-----DPE--EIIFTSGATESNNLAIKGAA 82 (386)
T ss_pred CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh-CC-----CCC--eEEEecCCcHHHHHHHHhhH
Confidence 44566666665442 2233444432 123456777888876 32 233 368999999999988754
Q ss_pred HhhhC--CCCeEEEcCCCCcchHHHHHhc---CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCC
Q 047180 138 QKRFH--PDSQIYIPVPTWSNHHNIWRDA---HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVD 212 (337)
Q Consensus 138 l~~~~--pgd~Vlv~~P~y~~y~~~~~~~---G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~ 212 (337)
..... .|..|++..=--+.....++.. |.++.++|+. . +..+|+++|++++++ ++++|.+-.-||=||.+
T Consensus 83 ~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~-~-~G~v~~e~L~~al~~---~T~LVSim~aNnE~G~I 157 (386)
T COG1104 83 LAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVD-S-NGLVDLEQLEEALRP---DTILVSIMHANNETGTI 157 (386)
T ss_pred HhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCC-C-CCeEcHHHHHHhcCC---CceEEEEEecccCeeec
Confidence 22211 3678888877666666666655 9999998873 3 577899999999973 35555556789999999
Q ss_pred CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 213 PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 213 ~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
-+ +++|.++|++++++..+|-+- .+.. . ++. +...+-..+.+ |-=|.+|.-| +|.+++
T Consensus 158 Qp---I~ei~~i~k~~~i~fHvDAvQ-a~Gk--i-----pi~-~~~~~vD~ls~-SaHK~~GpkG--iGaLyv 215 (386)
T COG1104 158 QP---IAEIGEICKERGILFHVDAVQ-AVGK--I-----PID-LEELGVDLLSF-SAHKFGGPKG--IGALYV 215 (386)
T ss_pred cc---HHHHHHHHHHcCCeEEEehhh-hcCc--e-----ecc-ccccCcceEEe-ehhhccCCCc--eEEEEE
Confidence 77 567889999999999999653 2210 0 010 11111122322 3348888877 688775
No 297
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=98.35 E-value=1e-05 Score=76.94 Aligned_cols=145 Identities=17% Similarity=0.130 Sum_probs=101.5
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch--HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeE
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH--HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y--~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
.+++.+|+.++..++.-+.. |||+|++..=+..+. ..+++..|++++.+... -+..+|+++++++|++.++.+.
T Consensus 59 ~ll~gsGt~amEAav~sl~~--pgdkVLv~~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~ 134 (383)
T COG0075 59 VLLSGSGTLAMEAAVASLVE--PGDKVLVVVNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKA 134 (383)
T ss_pred EEEcCCcHHHHHHHHHhccC--CCCeEEEEeCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccE
Confidence 56777889999988866666 999999998887774 57999999999888652 2467899999999986554444
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc-ccc
Q 047180 199 FLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG-LYG 277 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G 277 (337)
+.+ ...--+||+.- .+++|+++|++|+.++|+|-+=+ |.-.++ . ..+.+-++++ .+-=|.++ .||
T Consensus 135 V~~-vH~ETSTGvln---pl~~I~~~~k~~g~l~iVDaVsS-~Gg~~~-------~-vd~wgiDv~i-tgSQK~l~~PPG 200 (383)
T COG0075 135 VAV-VHNETSTGVLN---PLKEIAKAAKEHGALLIVDAVSS-LGGEPL-------K-VDEWGIDVAI-TGSQKALGAPPG 200 (383)
T ss_pred EEE-EeccCcccccC---cHHHHHHHHHHcCCEEEEEeccc-CCCccc-------c-hhhcCccEEE-ecCchhccCCCc
Confidence 444 44466788876 57789999999999999997632 211111 1 1223334444 45578874 456
Q ss_pred cccceeEe
Q 047180 278 QRVGCLSV 285 (337)
Q Consensus 278 ~RvG~~~~ 285 (337)
+|++.+
T Consensus 201 --la~v~~ 206 (383)
T COG0075 201 --LAFVAV 206 (383)
T ss_pred --cceeEE
Confidence 466554
No 298
>PLN02590 probable tyrosine decarboxylase
Probab=98.32 E-value=1.6e-05 Score=79.48 Aligned_cols=204 Identities=15% Similarity=0.069 Sum_probs=127.3
Q ss_pred HHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC-----ceeEEeeccchhHHHHHHHHHhhh-------
Q 047180 74 VREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK-----RIAAVQSLSGTGACRLFADFQKRF------- 141 (337)
Q Consensus 74 v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-----~i~~~~t~g~~~al~~~~~~l~~~------- 141 (337)
+-+.+...-......|..+.+..++-+.+.+|+.+.-+ +++. .-..++|.||++|...++.+-.+.
T Consensus 147 lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~g--lp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~ 224 (539)
T PLN02590 147 LGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQ--LPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGK 224 (539)
T ss_pred HHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhC--CCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcc
Confidence 44544443122234555566777888888888744321 1111 123577899998876655332221
Q ss_pred --CCCCeEEEcCCCCcchHHHHHhcCc---eeeEeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEeCCCCCCCCCCC
Q 047180 142 --HPDSQIYIPVPTWSNHHNIWRDAHV---TQRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLHACAHNPTGVDP 213 (337)
Q Consensus 142 --~pgd~Vlv~~P~y~~y~~~~~~~G~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~~~p~NPTG~~~ 213 (337)
.|.-.|++.+-+-.....+++.+|. +++.+|+...+++.+|++.|++++.+. ...+++|+-+-..=.||++
T Consensus 225 ~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai- 303 (539)
T PLN02590 225 TLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV- 303 (539)
T ss_pred cCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc-
Confidence 0222566677777778888999887 488888743335789999999998642 1234566656677778887
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc--CCeEEEEecccccccccccccceeEeeeCCHH
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD--GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEK 291 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~ 291 (337)
+.+++|+++|+++++|+-+|-+|.++.. +.. ..+.+... .-+.+. -++-|.++. ..-.|.+.+ .++.
T Consensus 304 --Dpl~~Ia~i~~~~g~WlHVDaA~GG~al--~~~---~~r~~~~Gie~ADSit-~D~HK~l~~-p~~cg~llv--r~~~ 372 (539)
T PLN02590 304 --DPLVPLGNIAKKYGIWLHVDAAYAGNAC--ICP---EYRKFIDGIENADSFN-MNAHKWLFA-NQTCSPLWV--KDRY 372 (539)
T ss_pred --CCHHHHHHHHHHhCCeEEEecchhhhhh--cCh---hhHHHhcCCccCCEEE-ECchhhcCc-CcCEEEEEe--cCHH
Confidence 6688899999999999999999998752 111 12222111 112333 357788875 466777665 5553
No 299
>PLN02271 serine hydroxymethyltransferase
Probab=98.28 E-value=3.8e-05 Score=76.11 Aligned_cols=144 Identities=17% Similarity=0.113 Sum_probs=93.8
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH---------HhcCce--eeEeeeccCCCCCCChHHHHHHH
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW---------RDAHVT--QRTFHYYHPGTKGLDFAALMDDI 190 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~---------~~~G~~--~~~~~~~~~~~~~~d~~~l~~~l 190 (337)
++..+|+.|...++..|.+ |||+|+..+..++++.... ...|.. .++|++ ++++..+|.+++++..
T Consensus 218 VQp~SGs~AN~aV~~ALl~--PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~-d~~~g~IDyd~lek~a 294 (586)
T PLN02271 218 VQPYSCTSANFAVYTGLLL--PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKV-NPQTGYIDYDKLEEKA 294 (586)
T ss_pred eeeccHHHHHHHHHHHhcC--CCCEEEEecCCCCCchhcccccccccccccccceEEEEEccc-ccccCccCHHHHHHHh
Confidence 5677888888777777765 9999999999999886542 334543 444445 3346789999999854
Q ss_pred HcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEecc
Q 047180 191 KNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQSY 269 (337)
Q Consensus 191 ~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 269 (337)
.. .+ +.+|+...-.|| ..+ .+++|.++|++++++++.|.++. ++...+... .+ +. +.+ ++..|.
T Consensus 295 ~~-~r-PKLII~g~Sayp--r~~---D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~--sP---~~--~aD-vvt~TT 359 (586)
T PLN02271 295 LD-FR-PKILICGGSSYP--REW---DYARFRQIADKCGAVLMCDMAHISGLVAAKECV--NP---FD--YCD-IVTSTT 359 (586)
T ss_pred hh-cC-CeEEEECchhcc--CcC---CHHHHHHHHHHcCCEEEEECcccccccccCcCC--CC---Cc--CCc-EEEeCC
Confidence 43 23 344443545677 333 46677888999999999999874 343221100 01 11 112 567788
Q ss_pred cccccccccccceeEe
Q 047180 270 AKNMGLYGQRVGCLSV 285 (337)
Q Consensus 270 SK~~~~~G~RvG~~~~ 285 (337)
-|++. |=|-|.+++
T Consensus 360 HKtLr--GPrGG~I~~ 373 (586)
T PLN02271 360 HKSLR--GPRGGIIFY 373 (586)
T ss_pred cccCC--CCCceEEEe
Confidence 99983 556577775
No 300
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=98.26 E-value=0.00023 Score=70.12 Aligned_cols=156 Identities=16% Similarity=0.147 Sum_probs=90.6
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCc-------------eeeEeeeccCCC--CC----
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHV-------------TQRTFHYYHPGT--KG---- 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~-------------~~~~~~~~~~~~--~~---- 180 (337)
+..+++|++|...++.+........+|+...-+|.+... .+...|. .++.+|+.+... +.
T Consensus 116 v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 195 (457)
T PRK05639 116 VLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGY 195 (457)
T ss_pred EEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcccccccccccc
Confidence 567899999999998765543334688888888888543 2222221 122233211100 00
Q ss_pred CChH--------HHHHHHHc---CCCCe-EEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCc
Q 047180 181 LDFA--------ALMDDIKN---APNGS-FFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPE 247 (337)
Q Consensus 181 ~d~~--------~l~~~l~~---~~~~~-~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~ 247 (337)
-|.+ .+++.+.. .+.+. .+++=| -+--.|. ..+++-+++|.++|+++|+++|.||+..+|...
T Consensus 196 ~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EP-iqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~Grt--- 271 (457)
T PRK05639 196 EEPDELINRFLDYLENYVFSHVVPPDEVAALFAEP-IQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRT--- 271 (457)
T ss_pred CCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcC---
Confidence 0222 23333321 12233 344433 3444565 567999999999999999999999999887311
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
........+ ...+++++ |+|.++ .|+-+|.+++
T Consensus 272 G~~~a~~~~-gv~PDiv~---~gK~l~-gG~pi~av~~ 304 (457)
T PRK05639 272 GKWFASEWF-EVKPDLII---FGKGVA-SGMGLSGVIG 304 (457)
T ss_pred chHHHHHhc-CCCCCEEE---echhhc-CCCcceeEEe
Confidence 011111111 12245555 799998 5888898875
No 301
>PLN02880 tyrosine decarboxylase
Probab=98.26 E-value=5.1e-05 Score=75.40 Aligned_cols=187 Identities=14% Similarity=0.032 Sum_probs=117.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccccC-----ceeEEeeccchhHHHHHHHHHhhhC---------CCCeEEEcCC
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGDNSEFIKDK-----RIAAVQSLSGTGACRLFADFQKRFH---------PDSQIYIPVP 152 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-----~i~~~~t~g~~~al~~~~~~l~~~~---------pgd~Vlv~~P 152 (337)
..|..+.+..++-+.+.+|+.+--+ ++++ .-..++|.||+++...++.+-.+.. +.-.|++.+-
T Consensus 112 ~~~~~sp~~~~lE~~vi~wl~~l~g--~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~ 189 (490)
T PLN02880 112 FSWITSPAATELEMIVLDWLAKLLN--LPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQ 189 (490)
T ss_pred cccccCcccHHHHHHHHHHHHHHhC--CCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCC
Confidence 3444445667788888888743221 1111 1125678899988766554332210 1125666776
Q ss_pred CCcchHHHHHhcCce---eeEeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 047180 153 TWSNHHNIWRDAHVT---QRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIK 226 (337)
Q Consensus 153 ~y~~y~~~~~~~G~~---~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~ 226 (337)
+-.....++..+|.. ++.+|....+++.+|++.|++++.+. ...+++|+-+-..-+||.+-+ +++|+++|+
T Consensus 190 aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~ 266 (490)
T PLN02880 190 THSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAK 266 (490)
T ss_pred chHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHH
Confidence 766777888889974 78888743346789999999988642 223456665667788898865 677888999
Q ss_pred hcCceeEEcccCCCCCCCCCccchHHHHH-hhhc-CCeEEEEecccccccccccccceeEe
Q 047180 227 AKGHFPFFDMAYQGFASGDPERDAKAIRI-FLKD-GHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 227 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
++|+|+.+|-+|.+...- . ...+. +... .-+ -+..++-|.++. ..-.|++.+
T Consensus 267 ~~~iwlHVDaA~gg~~~~--~---~~~~~~l~gie~aD-Sit~d~HKwl~~-P~~~g~llv 320 (490)
T PLN02880 267 SNGMWFHVDAAYAGSACI--C---PEYRHYIDGVEEAD-SFNMNAHKWFLT-NFDCSLLWV 320 (490)
T ss_pred HcCCEEEEehhhHHHHHh--C---HHHHHHhcCchhcC-EEEECchhhcCC-CccEEEEEE
Confidence 999999999999886421 0 01111 1110 112 334577898864 566777776
No 302
>PRK05965 hypothetical protein; Provisional
Probab=98.26 E-value=0.0003 Score=69.42 Aligned_cols=163 Identities=18% Similarity=0.178 Sum_probs=96.7
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-C-CCeEEEcCCCCcchHHH-HHhcCce------------eeEeeeccCCC--C
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-P-DSQIYIPVPTWSNHHNI-WRDAHVT------------QRTFHYYHPGT--K 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-p-gd~Vlv~~P~y~~y~~~-~~~~G~~------------~~~~~~~~~~~--~ 179 (337)
++.+++|++|...++++.... . + ..+|+...-+|.+.... ....|.. +..+|...... +
T Consensus 110 v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (459)
T PRK05965 110 VYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPV 189 (459)
T ss_pred EEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCccccccc
Confidence 567899999999998765433 1 2 25799999999887532 2222211 11121100000 1
Q ss_pred CCC--------hHHHHHHHHcCC-CC-eEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 180 GLD--------FAALMDDIKNAP-NG-SFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 180 ~~d--------~~~l~~~l~~~~-~~-~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
.-| ++.+++.+.... .. ..+++=| -+.-.|. +.+++-+++|.++|++||+++|.||+..+|. .|.
T Consensus 190 ~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEP-iqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~-- 266 (459)
T PRK05965 190 GDDPQAIIAASVAALRAKVAELGADNVAAFFCEP-IQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGP-- 266 (459)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCceEEEEEec-cccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCch--
Confidence 112 245666665322 23 3445534 4444565 5788999999999999999999999999883 221
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...+++++ |+|.++ .| +-+|.+++ .+++.+.+
T Consensus 267 --~~a~~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~~---~~~i~~~~ 306 (459)
T PRK05965 267 --LFACEAE-GVVPDLMT---VAKGLT-SGYVPMGAVLM---SDHVYQGI 306 (459)
T ss_pred --hhhHhhc-CCCCCeEE---echhhc-cCCcceeEEEE---cHHHHHHH
Confidence 1111111 11245554 589998 68 48999875 45554444
No 303
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=98.26 E-value=0.00016 Score=71.28 Aligned_cols=164 Identities=12% Similarity=0.073 Sum_probs=95.4
Q ss_pred EEeeccchhHHHHHHHHHhhhCC--C-CeEEEcCCCCcchHH-HHHhcCceeeE---eeeccCCC--CCCChHHHHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHP--D-SQIYIPVPTWSNHHN-IWRDAHVTQRT---FHYYHPGT--KGLDFAALMDDIK 191 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~p--g-d~Vlv~~P~y~~y~~-~~~~~G~~~~~---~~~~~~~~--~~~d~~~l~~~l~ 191 (337)
+..+++|++|...++.+...+.. | ..|+...-+|.+... .+...|..... .|....-. .-.|.+.+++.+.
T Consensus 144 v~f~~SGsEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~ 223 (459)
T PRK11522 144 SFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALS 223 (459)
T ss_pred EEEeCCchHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHH
Confidence 56799999999999876554321 3 368888888888653 33333322111 11111000 0115677777665
Q ss_pred c---CCCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHHHhhhcCCeEEEE
Q 047180 192 N---APNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIRIFLKDGHLLGLA 266 (337)
Q Consensus 192 ~---~~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~ 266 (337)
. ...+...++.-.-+.=.|. +.+++.+++|.++|+++|+++|.||+..+|. .| ..+....+ ...++++
T Consensus 224 ~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG----~~~a~e~~-gv~PDiv-- 296 (459)
T PRK11522 224 ECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTG----KMFACEHE-NVQPDIL-- 296 (459)
T ss_pred HhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccc----hhhhhhcc-CCCCCEE--
Confidence 3 1222333333323333455 4578889999999999999999999998762 11 11111111 1123433
Q ss_pred ecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 267 QSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 267 ~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
+|+|.+| .| +-+|.+++ .+++.+.+
T Consensus 297 -t~gK~lg-gG~~Pigav~~---~~~i~~~~ 322 (459)
T PRK11522 297 -CLAKALG-GGVMPIGATIA---TEEVFSVL 322 (459)
T ss_pred -Eechhhh-CCCccceeEEE---cHHHHHHh
Confidence 6899998 57 58998875 34544433
No 304
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=98.21 E-value=1.8e-05 Score=75.89 Aligned_cols=202 Identities=16% Similarity=0.115 Sum_probs=117.7
Q ss_pred HHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCC-c--ccccCceeEEeeccchhHHHHHHHHHhhhC------C
Q 047180 74 VREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNS-E--FIKDKRIAAVQSLSGTGACRLFADFQKRFH------P 143 (337)
Q Consensus 74 v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~-~--~~~~~~i~~~~t~g~~~al~~~~~~l~~~~------p 143 (337)
+.+.+... +. ....|..+....++-+.+.+|+.+--+ + ....+.-..++|.||+++...++.+..+.. .
T Consensus 56 ~~~~l~~~~n~-n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~ 134 (373)
T PF00282_consen 56 LADLLASALNQ-NGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAK 134 (373)
T ss_dssp HHHHHHHHHT--BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhcc-cccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhc
Confidence 34544443 32 233343333455666777777633211 1 011111346899999999877664432210 1
Q ss_pred C-----C-eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCCCCCCCCCCC
Q 047180 144 D-----S-QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACAHNPTGVDPS 214 (337)
Q Consensus 144 g-----d-~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p~NPTG~~~s 214 (337)
| + .|++.+=+-.....++..+|..++.+|+.+ ++.+|+++|++.+.+.. ...++|+-+-..-.||.+
T Consensus 135 ~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~-- 210 (373)
T PF00282_consen 135 GVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI-- 210 (373)
T ss_dssp TTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB--
T ss_pred ccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc--
Confidence 2 2 456666466667889999999999999843 58899999998876531 124345546677778887
Q ss_pred HHHHHHHHHHHHhcCceeEEcccCCC--CCCCCCccchHHHHHhhhc--CCeEEEEecccccccccccccceeEeeeCCH
Q 047180 215 EEQWKEISYQIKAKGHFPFFDMAYQG--FASGDPERDAKAIRIFLKD--GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 215 ~~~~~~l~~~~~~~~~~ii~De~Y~~--~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
+.+++|+++|+++++|+-+|-+|.+ +....+ +.+... .-..|. -++-|.++. -.-.|++.+ .++
T Consensus 211 -D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~-------~~~~~gi~~adSit-~d~HK~l~~-P~~~~~~l~--r~~ 278 (373)
T PF00282_consen 211 -DPLEEIADICEKYNIWLHVDAAYGGSALLSPEY-------RHLLFGIERADSIT-IDPHKWLGV-PYGCGVLLV--RDK 278 (373)
T ss_dssp --SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTT-------GGGGTTGGGESEEE-EETTTTTS--SSS-EEEEE--SSG
T ss_pred -cCHHHHhhhccccceeeeecccccccccccccc-------cccccccccccccc-cchhhhhcC-CccceeEEe--ecc
Confidence 8889999999999999999999998 322111 111110 112333 367899885 457888765 666
Q ss_pred HH
Q 047180 291 KQ 292 (337)
Q Consensus 291 ~~ 292 (337)
..
T Consensus 279 ~~ 280 (373)
T PF00282_consen 279 SD 280 (373)
T ss_dssp GG
T ss_pred cc
Confidence 54
No 305
>PRK12403 putative aminotransferase; Provisional
Probab=98.20 E-value=0.00032 Score=69.26 Aligned_cols=163 Identities=18% Similarity=0.142 Sum_probs=89.8
Q ss_pred EEeeccchhHHHHHHHHHhhh-----CCCC-eEEEcCCCCcchHH-HHHhcCce-----------eeEeeeccC--CCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRF-----HPDS-QIYIPVPTWSNHHN-IWRDAHVT-----------QRTFHYYHP--GTKG 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~-----~pgd-~Vlv~~P~y~~y~~-~~~~~G~~-----------~~~~~~~~~--~~~~ 180 (337)
++.+++|++|...++.+...+ .+++ .|+...-+|..... .+...|.+ +..+|.... ..+.
T Consensus 118 v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 197 (460)
T PRK12403 118 AIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGE 197 (460)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccC
Confidence 578999999999988776533 1333 45555667777532 33333322 222221000 0011
Q ss_pred CC--------hHHHHHHHHcC-CCCe-EEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCcc
Q 047180 181 LD--------FAALMDDIKNA-PNGS-FFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPER 248 (337)
Q Consensus 181 ~d--------~~~l~~~l~~~-~~~~-~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~ 248 (337)
.. .+.+++.+.+. +... .+++=+- +.=.|. ..+++-+++|.++|++||+++|.||+..+|. .|.
T Consensus 198 ~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv-~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~--- 273 (460)
T PRK12403 198 LTPAEFGRRAALQLEEKILELGAENVAGFVAEPF-QGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGE--- 273 (460)
T ss_pred CChHHHHHHHHHHHHHHHHHhCCCceEEEEEccc-cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch---
Confidence 11 24455555322 2233 3444332 333355 4678999999999999999999999998773 221
Q ss_pred chHHHHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHH
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...+++++ |+|.++ .|. -+|.+++ .+++.+.+
T Consensus 274 -~~a~e~~-gv~PDiv~---~gK~lg-gG~~Piga~v~---~~~i~~~~ 313 (460)
T PRK12403 274 -WFAHEHF-GFEPDTLS---IAKGLT-SGYVPMGGLVL---SKRIAEAL 313 (460)
T ss_pred -hhhhhhc-CCCCCeEE---Eccccc-ccccceEEEEE---CHHHHHHH
Confidence 1111111 11234553 799998 574 8888775 35544443
No 306
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=98.19 E-value=0.00011 Score=75.20 Aligned_cols=191 Identities=9% Similarity=0.075 Sum_probs=115.0
Q ss_pred CCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceee
Q 047180 90 LPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQR 169 (337)
Q Consensus 90 ~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~ 169 (337)
....|...=-|..|..+++-+ + ..+.|+|++.++..++.++.. |||.|+++.=+--.....+.+.|++++
T Consensus 191 l~~~G~i~eAe~~aA~~fgAd-------~-tyfvvNGTS~~n~av~~a~~~--~Gd~VLvdRN~HKSv~~aLilsga~PV 260 (713)
T PRK15399 191 LDHTGPHLEAEEYIARTFGAE-------Q-SYIVTNGTSTSNKIVGMYAAP--AGSTLLIDRNCHKSLAHLLMMSDVVPI 260 (713)
T ss_pred CCCChHHHHHHHHHHHHhCCC-------c-EEEEeCChHHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHcCCeeE
Confidence 344565433344444455543 2 257899999999888877766 999999999998888888999999998
Q ss_pred EeeeccCCCCC----CCh-----HHHHHHHHcCCCC---eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCcee-EEcc
Q 047180 170 TFHYYHPGTKG----LDF-----AALMDDIKNAPNG---SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFP-FFDM 236 (337)
Q Consensus 170 ~~~~~~~~~~~----~d~-----~~l~~~l~~~~~~---~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~i-i~De 236 (337)
.++-.. +.++ ++. +.+++++.+.+.. ..+++ .+| +=-|.+++.+++ ++.| ++.+ ++||
T Consensus 261 Yl~P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvi-t~p-TYdGi~yd~~~I---~~~~---g~~~ilvDE 331 (713)
T PRK15399 261 WLKPTR-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVI-TNS-TYDGLLYNTDWI---KQTL---DVPSIHFDS 331 (713)
T ss_pred Eecccc-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEE-ECC-CCCceeeCHHHH---HHHh---CCCEEEEec
Confidence 875322 2233 344 8888888876532 24444 455 667999987664 4445 4545 6999
Q ss_pred cCCCCC-CCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHh
Q 047180 237 AYQGFA-SGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQ 302 (337)
Q Consensus 237 ~Y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~ 302 (337)
||.... |.+...+..++........-++++.|.=|..+ |+.=+.++-..++ -..+++.+.+..
T Consensus 332 Ahgah~~F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~--alTQaS~iHvk~~-vd~~~~n~a~~m 395 (713)
T PRK15399 332 AWVPYTHFHPIYQGKSGMSGERVPGKVIFETQSTHKMLA--AFSQASLIHIKGE-YDEETFNEAFMM 395 (713)
T ss_pred cchhhhhcCcccCCcChhhCCCCCCeeeeeeeehhcccc--ccchheeeeecCC-CCHHHHHHHHHH
Confidence 997643 22111111112100011123455789999974 6655544433222 223556665554
No 307
>PRK06062 hypothetical protein; Provisional
Probab=98.18 E-value=0.00038 Score=68.52 Aligned_cols=163 Identities=15% Similarity=0.118 Sum_probs=95.3
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCce-----------eeEeeeccCCC--CC--CC--
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHVT-----------QRTFHYYHPGT--KG--LD-- 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~~-----------~~~~~~~~~~~--~~--~d-- 182 (337)
+..+++|++|...++.+...+....+|+...-+|.+... .+...|.. +..++...... +. -|
T Consensus 115 v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 194 (451)
T PRK06062 115 VFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEE 194 (451)
T ss_pred EEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHH
Confidence 577999999999998765543234688888888888753 33222211 11121100000 10 12
Q ss_pred -----hHHHHHHHHcC-CCC-eEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch-HHH
Q 047180 183 -----FAALMDDIKNA-PNG-SFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA-KAI 253 (337)
Q Consensus 183 -----~~~l~~~l~~~-~~~-~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~-~~~ 253 (337)
++.+++.+... +.+ ..+++=+-..+ .|.+ .+++-+++|.++|+++|+++|.||+..+|.. ... ...
T Consensus 195 ~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~-gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGR----tG~~~a~ 269 (451)
T PRK06062 195 ECERALAHLERVIELEGPSTIAAILLESVPGT-AGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGR----TGKWFAI 269 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEccccCC-CCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCc----CcHHHHH
Confidence 56667766532 122 34444343333 3544 6899999999999999999999999988731 111 111
Q ss_pred HHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHH
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~ 296 (337)
..+ ...++++ .|+|.+| .|+ -+|.+++ .+++.+.+
T Consensus 270 ~~~-gv~PDi~---t~gK~lg-gG~~Pigav~~---~~~i~~~~ 305 (451)
T PRK06062 270 EHF-GVVPDLI---TFAKGVN-SGYVPLGGVAI---SEAIAATF 305 (451)
T ss_pred Hhc-CCCCCee---eechhhh-cCCcCcEEEEE---cHHHHHHh
Confidence 111 1123433 5799998 574 8888775 34554443
No 308
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.18 E-value=0.00037 Score=68.81 Aligned_cols=155 Identities=12% Similarity=0.053 Sum_probs=92.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCce------------eeEeeeccCCC--CC-C---
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHVT------------QRTFHYYHPGT--KG-L--- 181 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~~------------~~~~~~~~~~~--~~-~--- 181 (337)
+..+++|++|...++.+........+|+...-+|..... .+...|.. +..+|...... +. .
T Consensus 133 v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (459)
T PRK06082 133 VLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGS 212 (459)
T ss_pred EEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHH
Confidence 578999999999998765543334789998988888643 33333321 11122100000 10 0
Q ss_pred ---ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHHHhh
Q 047180 182 ---DFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIRIFL 257 (337)
Q Consensus 182 ---d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~~~~ 257 (337)
+++.+++.+........+++=+ -++-.+.+.+++-|++|.++|++||+++|.||+..+|. .| .......+
T Consensus 213 ~~~~~~~l~~~i~~~~~vAavIvEP-v~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG----~~fa~e~~- 286 (459)
T PRK06082 213 DVHYADYLEYVIEKEGGIGAFIAEA-VRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTG----EWFTHQAY- 286 (459)
T ss_pred HHHHHHHHHHHHhcCCCEEEEEECC-ccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc----hhhHhHhh-
Confidence 1244666665322223444433 33434557888999999999999999999999998873 11 11111111
Q ss_pred hcCCeEEEEecccccccccc-cccceeEe
Q 047180 258 KDGHLLGLAQSYAKNMGLYG-QRVGCLSV 285 (337)
Q Consensus 258 ~~~~~~i~~~S~SK~~~~~G-~RvG~~~~ 285 (337)
...+++++ |+|.+| .| +-+|.+++
T Consensus 287 gv~PDiv~---~gKgl~-gG~~P~~av~~ 311 (459)
T PRK06082 287 GIEPDILC---IGKGLG-GGLVPIAAMIT 311 (459)
T ss_pred CCCCCEEE---eccccc-CCCCcceEEEE
Confidence 12244544 799999 57 48888875
No 309
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=98.18 E-value=0.00011 Score=73.34 Aligned_cols=195 Identities=11% Similarity=-0.010 Sum_probs=118.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCC-CCc--cc------ccCceeEEeeccchhHHHHHHHHHhhhC---------------
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGD-NSE--FI------KDKRIAAVQSLSGTGACRLFADFQKRFH--------------- 142 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~-~~~--~~------~~~~i~~~~t~g~~~al~~~~~~l~~~~--------------- 142 (337)
..|..+....++-+.+.+|+.+. +.. .+ .++.-..++|.||+.|...++.+-.+..
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence 33444445666777777776221 000 00 1112235778999988766654332210
Q ss_pred ---------CCCeEEEcCCCCcchHHHHHhcCc---eeeEeeeccCCCCCCChHHHHHHHHc---CCCCeEEEEeCCCCC
Q 047180 143 ---------PDSQIYIPVPTWSNHHNIWRDAHV---TQRTFHYYHPGTKGLDFAALMDDIKN---APNGSFFLLHACAHN 207 (337)
Q Consensus 143 ---------pgd~Vlv~~P~y~~y~~~~~~~G~---~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~~ili~~~p~N 207 (337)
++..|++.+-.-.....+++..|. +++.+|+ ++ ++.+|++.|++.+.+ ...+.++++.+..++
T Consensus 199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~-d~-~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt 276 (522)
T TIGR03799 199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKT-DA-NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTT 276 (522)
T ss_pred hhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEe-CC-CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence 134677777777777778888887 7888988 33 578999999998863 222345555455677
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHH-hhhc-CCeEEEEecccccccccccccceeEe
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRI-FLKD-GHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
.||.+-+ +++|+++|+++++++.+|-+|..... +.. ..+. +... .-+. ++-|.=|.++.| .-+|.+++
T Consensus 277 ~tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~--~~~---~~r~~l~gle~aDS-it~d~HK~l~~P-~g~G~llv 346 (522)
T TIGR03799 277 ETGNIDP---LDEMADIAQELGCHFHVDAAWGGATL--LSN---TYRHLLKGIERADS-VTIDAHKQLYVP-MGAGMVLF 346 (522)
T ss_pred CCCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHH--hCH---HHHHHhcCchhCCE-EEEChhhcCCcC-cccEEEEE
Confidence 9999976 66788899999999999999986431 101 0111 1111 1233 344677965433 44788776
Q ss_pred eeCCHHHHHH
Q 047180 286 LCEDEKQAVA 295 (337)
Q Consensus 286 ~~~~~~~~~~ 295 (337)
.++...+.
T Consensus 347 --r~~~~~~~ 354 (522)
T TIGR03799 347 --KDPALMSA 354 (522)
T ss_pred --eCHHHHHH
Confidence 56655443
No 310
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=98.17 E-value=7.3e-05 Score=73.82 Aligned_cols=187 Identities=14% Similarity=0.114 Sum_probs=121.9
Q ss_pred CCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeE
Q 047180 91 PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRT 170 (337)
Q Consensus 91 ~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~ 170 (337)
...|.-.=-|..|..+++.+ . ..++++|.++|...+.+.+.. |||.|+++..+--+....+-++|+.++.
T Consensus 67 ~p~G~i~eAqe~aA~~fgAd-------~-tyFvvNGTS~ank~vi~a~~~--~GD~VLvdRN~HKSi~~glilaGa~Pvy 136 (557)
T COG1982 67 DPEGPIKEAQELAARVFGAD-------H-TYFVVNGTSTANKAVINAVLT--PGDKVLVDRNCHKSIHHGLILAGATPVY 136 (557)
T ss_pred CCCccHHHHHHHHHHHhCCC-------c-eEEEECCccHHHHHHHHhhcC--CCCEEEecCCccHHHHHHHHHcCCceEE
Confidence 34564433344444455653 1 157899999999888887776 9999999999999888888899999887
Q ss_pred eeeccCCC----CCCChHHHHHHHHcCCCC-eEEEEeCCCCCCC--CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCC
Q 047180 171 FHYYHPGT----KGLDFAALMDDIKNAPNG-SFFLLHACAHNPT--GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFAS 243 (337)
Q Consensus 171 ~~~~~~~~----~~~d~~~l~~~l~~~~~~-~~ili~~~p~NPT--G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~ 243 (337)
+.-..... .+++.+.+++++.+++.. +.+++ .||| |.+++.+ +|++.+...++++..||+..-. +
T Consensus 137 l~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vi----tnpTYdGv~~n~~---~i~~~~~~~~a~v~~deah~~~-~ 208 (557)
T COG1982 137 LEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVI----TNPTYDGVCYNLR---KIVELLHHYGAWVLYDEAHPAH-F 208 (557)
T ss_pred ecCCCCccccccCCCCHHHHHHHHHhChhhheeEEE----ecCccceEeecHH---HHHHHHhhcCceEEhhhcCccc-c
Confidence 64322111 467899999988877665 55555 4555 8998755 5677777889999999976432 1
Q ss_pred CCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC--HHHHHHHHHHHHh
Q 047180 244 GDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED--EKQAVAVKSQLQQ 302 (337)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~--~~~~~~~~~~l~~ 302 (337)
+ +. +..+. ........++..|.=|..+ ++.-+-++-. .+ .-..+++.+.+..
T Consensus 209 ~-~~-~~l~~--~~~~~~~~~~tqS~HK~l~--alSQaS~iHv-~~~~~~~~~r~nea~~~ 262 (557)
T COG1982 209 D-FS-PMLPE--SALNGGADFVTQSTHKLLA--ALSQASMIHV-KDGRAVNHERFNEALMM 262 (557)
T ss_pred c-cc-ccCcc--hhhhcCceEEEechhhhhh--hhhhhHHHhh-CCCccCCHHHHHHHHHH
Confidence 1 11 11111 1122356788899999886 5655544322 22 2224566665554
No 311
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=98.17 E-value=0.00015 Score=70.89 Aligned_cols=163 Identities=10% Similarity=-0.040 Sum_probs=93.1
Q ss_pred EEeeccchhHHHHHHHHHhhhC-----CC-CeEEEcCCCCcchHHHH-HhcCce-------------eeEeeeccCCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFH-----PD-SQIYIPVPTWSNHHNIW-RDAHVT-------------QRTFHYYHPGTKG 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~-----pg-d~Vlv~~P~y~~y~~~~-~~~G~~-------------~~~~~~~~~~~~~ 180 (337)
+..+++|++|...++.+...+. +| .+|+...-+|......+ ...|.. ...+|... ..+.
T Consensus 108 v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~ 186 (427)
T TIGR00508 108 VFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQ-NRFD 186 (427)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCC-cccc
Confidence 5788899999988886544321 23 67999999998864322 222311 01111100 0111
Q ss_pred -----CChHHHHHHHHcCCCCeEEEEeCCC--CCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHH
Q 047180 181 -----LDFAALMDDIKNAPNGSFFLLHACA--HNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKA 252 (337)
Q Consensus 181 -----~d~~~l~~~l~~~~~~~~ili~~~p--~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~ 252 (337)
-|++++++.+.....+...++. -| ++-.|. +++.+.+++|.++|+++++++|.||++.+|... .....
T Consensus 187 ~~~~~~~~~~l~~~l~~~~~~vaaviv-EPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~---G~~~~ 262 (427)
T TIGR00508 187 EEWNEEAITPLAKLMELHSDEIAAVIL-EPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRT---GKLFA 262 (427)
T ss_pred chhHHHHHHHHHHHHHhcCCcEEEEEE-echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcC---Cccch
Confidence 1456677777543333333432 33 454555 568999999999999999999999999776321 00111
Q ss_pred HHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHH
Q 047180 253 IRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 253 ~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~ 296 (337)
...+ ...+.+++ +||.++ .|+ -++.+++ ++++.+.+
T Consensus 263 ~~~~-~v~pDi~~---~gK~l~-gG~~p~~a~~~---~~~~~~~~ 299 (427)
T TIGR00508 263 CEHA-GVVPDILC---VGKALT-GGYMTLSATVT---TDKVAQTI 299 (427)
T ss_pred hhhc-CCCCCEEE---echhhh-cCcccceEEEE---cHHHHHHH
Confidence 1111 11234443 799996 675 4555543 45554444
No 312
>PRK07482 hypothetical protein; Provisional
Probab=98.15 E-value=0.00064 Score=67.13 Aligned_cols=155 Identities=16% Similarity=0.107 Sum_probs=91.1
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-C-CCeEEEcCCCCcchHHHH-HhcCc------------eeeEeeeccCCC---
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-P-DSQIYIPVPTWSNHHNIW-RDAHV------------TQRTFHYYHPGT--- 178 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-p-gd~Vlv~~P~y~~y~~~~-~~~G~------------~~~~~~~~~~~~--- 178 (337)
+..+++|++|...++.+...+ . + ..+|+...-+|.+..... ...|. .+..++.....+
T Consensus 114 v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 193 (461)
T PRK07482 114 VYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRAD 193 (461)
T ss_pred EEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccc
Confidence 568999999999998765432 1 2 257888888898864321 21221 111111100000
Q ss_pred CC--------CChHHHHHHHHcC-CCC-eEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCC
Q 047180 179 KG--------LDFAALMDDIKNA-PNG-SFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDP 246 (337)
Q Consensus 179 ~~--------~d~~~l~~~l~~~-~~~-~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~ 246 (337)
.+ .+++.+++.+... +.. ..+++=| -+.-.|.+ .+++-+++|.++|++||+++|.||+..+|. .+.
T Consensus 194 ~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EP-vqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~- 271 (461)
T PRK07482 194 AGMSEEQFSAYCADELEELILAEGPDTIAAFIAEP-VLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGS- 271 (461)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcc-
Confidence 00 0346667666422 233 3445434 33334555 688999999999999999999999999883 321
Q ss_pred ccchHHHHHhhhcCCeEEEEeccccccccccc-ccceeEe
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSV 285 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~ 285 (337)
......+ ...+++++ ++|.++ .|. -+|.+++
T Consensus 272 ---~~a~~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~~ 303 (461)
T PRK07482 272 ---MFGSDHY-GIEPDLIT---VAKGLT-SAYAPLSGSIV 303 (461)
T ss_pred ---hhhHHhc-CCCCCEEE---Eccccc-cCccccceeee
Confidence 1111111 22345655 589998 575 7887765
No 313
>PRK13578 ornithine decarboxylase; Provisional
Probab=98.14 E-value=7.3e-05 Score=76.57 Aligned_cols=177 Identities=12% Similarity=0.128 Sum_probs=109.4
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCce
Q 047180 89 YLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHVT 167 (337)
Q Consensus 89 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~~ 167 (337)
.....|...=-|..|..+++-+ + ..+.|+|++.++..++.++.. |||.|+++.=+--.... ++.+.|++
T Consensus 169 L~~~eG~i~eAq~~AA~~fgAd-------~-tyFlvNGTS~gn~a~i~a~~~--~Gd~VLvdRN~HKSv~hgaLiLsGa~ 238 (720)
T PRK13578 169 LLIHEGAAKDAQKHAAKVFNAD-------K-TYFVLNGTSASNKVVTNALLT--PGDLVLFDRNNHKSNHHGALIQAGAT 238 (720)
T ss_pred CCCCChHHHHHHHHHHHHhCCC-------c-eEEEeCChhHHHHHHHHHhcC--CCCEEEeecccHHHHHHHHHHHcCCe
Confidence 3345565443444444455643 2 257899999999988877766 99999999988877666 48899999
Q ss_pred eeEeeeccCCCCC----CCh-----HHHHHHHHcC-CC-------CeEEEEeCCCCCCCCCCCCHHHHHHHHHH-HHhcC
Q 047180 168 QRTFHYYHPGTKG----LDF-----AALMDDIKNA-PN-------GSFFLLHACAHNPTGVDPSEEQWKEISYQ-IKAKG 229 (337)
Q Consensus 168 ~~~~~~~~~~~~~----~d~-----~~l~~~l~~~-~~-------~~~ili~~~p~NPTG~~~s~~~~~~l~~~-~~~~~ 229 (337)
++.++-.. +.++ ++. +.+++++.+. +. .+.+++ .+| +=-|.++.. ++|+++ +..++
T Consensus 239 PVYl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvi-t~p-TYdG~~ydi---~~I~~~~~h~~~ 312 (720)
T PRK13578 239 PVYLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVI-QLG-TYDGTIYNA---RQVVDKIGHLCD 312 (720)
T ss_pred EEEeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEE-ECC-CCcceeecH---HHHHHHhhccCC
Confidence 88875322 2233 354 4488888765 22 133444 333 557999975 556666 56677
Q ss_pred ceeEEcccCCCCC-CCCCccchHHHH-HhhhcCCeEEEEecccccccccccccceeE
Q 047180 230 HFPFFDMAYQGFA-SGDPERDAKAIR-IFLKDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 230 ~~ii~De~Y~~~~-~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
.|++||||.... |.+.-.+.++.. .+....+-++++.|.=|..+ ++-=+.++
T Consensus 313 -~llvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~--alTQaS~L 366 (720)
T PRK13578 313 -YILFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQA--GFSQTSQI 366 (720)
T ss_pred -cEEEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcch--hhhhHhhh
Confidence 899999987653 221101111111 01111235688899999984 56545443
No 314
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=98.09 E-value=0.00021 Score=63.99 Aligned_cols=213 Identities=14% Similarity=0.051 Sum_probs=135.1
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY 174 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~ 174 (337)
+..|.+-+++|+ +-+ . +=+|+|+-++-...+..+.. +||.|++..-.--.-.-+++.+|.++..+|-.
T Consensus 63 I~~F~~dlaeFl-g~D-----~----~R~t~GARe~KfavMhal~~--~gd~vV~D~~aHYttyvAAEragl~v~eVp~t 130 (382)
T COG1103 63 IKDFLEDLAEFL-GMD-----E----VRVTAGAREAKFAVMHALCK--EGDWVVVDSLAHYTTYVAAERAGLNVAEVPNT 130 (382)
T ss_pred HHHHHHHHHHHh-CCc-----e----eeecccchhhHHHHHHHhcc--CCCEEEEcCcchHHHHHHHHhcCCeEEecCCC
Confidence 456777888886 332 1 24799999999988888777 89999998765444344778899999999964
Q ss_pred cCCCCCCChHHHHHHHHcCC----CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 175 HPGTKGLDFAALMDDIKNAP----NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 175 ~~~~~~~d~~~l~~~l~~~~----~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
...++.++++...+.+++.. +...+.++..| .|..=+..+-++++++|+++++.++..-+|.-=. .
T Consensus 131 g~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~---Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Gr---m---- 200 (382)
T COG1103 131 GYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHV---DGEYGNLADAKKVAKICREYGVPLLLNCAYTVGR---M---- 200 (382)
T ss_pred CCCceEecHHHHHHHHHHHHhccCCCceEEEEecc---CCCcCCchhhHHHHHHHHHcCCceEeecceeecc---c----
Confidence 44568899888777665421 22445555555 4444455677899999999999999999995210 0
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHh---hh-cccccCCChhHHHHHHHHhCCH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQ---LA-RPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~---~~-~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
+++ ..+.+.+ ++++|=-|+++. .--+|.+.. ..+..+.+...-.. .. -.+..| .+-+.-+++.+-+-|
T Consensus 201 -pvs-~ke~g~D-FiVgSGHKsmAA-s~PiGvl~~---~eE~ae~V~r~Sg~~~~~KEvellGC-T~rGapivTlmASfP 272 (382)
T COG1103 201 -PVS-GKEIGAD-FIVGSGHKSMAA-SAPIGVLAM---SEEWAEIVLRRSGRAFPKKEVELLGC-TVRGAPIVTLMASFP 272 (382)
T ss_pred -ccc-ccccCCC-EEEecCccchhc-cCCeeEEee---hhHHHHHHHhhcccccccceeeeecc-cccCchHHHHHhcCH
Confidence 111 1111222 556777899985 446898865 34444433221111 00 013334 345665666555544
Q ss_pred H---HHHHHHhhhC
Q 047180 327 E---LKKLWLKEVQ 337 (337)
Q Consensus 327 ~---~~~~w~~el~ 337 (337)
. -.+.|.+|++
T Consensus 273 ~V~eRVkrWdeEv~ 286 (382)
T COG1103 273 HVVERVKRWDEEVE 286 (382)
T ss_pred HHHHHHHHHHHHHH
Confidence 3 4678888863
No 315
>PRK07046 aminotransferase; Validated
Probab=98.09 E-value=0.00079 Score=66.31 Aligned_cols=161 Identities=13% Similarity=0.037 Sum_probs=96.1
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH--HHHhcCceee------Eee--eccC---CCCCCChHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN--IWRDAHVTQR------TFH--YYHP---GTKGLDFAALM 187 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~--~~~~~G~~~~------~~~--~~~~---~~~~~d~~~l~ 187 (337)
+..+++|++|...++++...+...++|+...=+|.+... .....+.+.. .++ .... -.| -|++.++
T Consensus 133 v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~ 211 (453)
T PRK07046 133 WQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALE 211 (453)
T ss_pred EEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHH
Confidence 467899999999988765544334788888888888632 1111111110 000 0000 011 1788888
Q ss_pred HHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEe
Q 047180 188 DDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQ 267 (337)
Q Consensus 188 ~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (337)
+.+.. .+-..+++=|-..|---...+.+.+++|.++|+++|+++|.||+.. |..+ + .... ..+ ...++++
T Consensus 212 ~~l~~-~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g-~-Gg~~--~~~-gv~PDi~--- 281 (453)
T PRK07046 212 AALAD-GDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSG-P-GGYT--RAH-GLEPDFL--- 281 (453)
T ss_pred HHhCC-CCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccC-C-cchh--HHh-CCCccce---
Confidence 87742 2234455544444443355677899999999999999999999976 4322 1 1111 111 2223444
Q ss_pred cccccccccccccceeEeeeCCHHHHHHH
Q 047180 268 SYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 268 S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
.|+|.+| .|+-+|.+++ ..++.+.+
T Consensus 282 t~gK~lg-gG~Pi~av~g---~~~i~~~~ 306 (453)
T PRK07046 282 VVGKPIA-GGVPCAVYGF---SAELAERA 306 (453)
T ss_pred eehhhhc-CCCcceeeee---hHHHHHHH
Confidence 4799999 6999998765 45554444
No 316
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.08 E-value=0.0001 Score=70.18 Aligned_cols=164 Identities=12% Similarity=-0.021 Sum_probs=92.0
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeecc-chhHHHHHHHHHhh-hCCCCeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS-GTGACRLFADFQKR-FHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g-~~~al~~~~~~l~~-~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
+.+.|+.+++++ +.. +++. ++.|.| +|+++..++.-+.. ..+||.|++ .|.......+++..|.+++.++
T Consensus 46 ~~~~r~~l~~l~-~~~----~~~~--vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~ 117 (355)
T cd00611 46 VNEAESDLRELL-NIP----DNYK--VLFLQGGATGQFAAVPLNLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVA 117 (355)
T ss_pred HHHHHHHHHHHh-CCC----CCce--EEEEcCCchHHHHHHHHhcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEe
Confidence 345677777766 321 1232 567777 89999999876642 124555544 3333333347788899888887
Q ss_pred eccCCCCCCC-hHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchH
Q 047180 173 YYHPGTKGLD-FAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 173 ~~~~~~~~~d-~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
..+...+ .+ ++..+..+. ++.+. |..+...|.||..+. ++++.+|+++++|-+-. +..-+. +
T Consensus 118 ~~~~g~~-~~~~~~~~~~~~--~~~~l-V~~~h~~t~tG~~~~--------~i~~~~g~~~~VDa~qs-~g~~~i--d-- 180 (355)
T cd00611 118 AKEEGKY-TKIPDVETWDLA--PDAAY-VHYCSNETIHGVEFD--------EVPDTGGVPLVADMSSN-ILSRPI--D-- 180 (355)
T ss_pred cccccCC-CCCCCHhhcCCC--CCCCE-EEEeCCcccccEEcc--------eecccCCCeEEEEcccc-ccCCCC--C--
Confidence 6221111 13 222222232 33344 444777999999743 34445899999997643 211111 1
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHH
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~ 295 (337)
+.+. .+ .+.|.-|.||.+| +|++++ +++.+++
T Consensus 181 ----v~~~--~~-~~ss~~K~lGP~G--~g~l~~---~~~~~~~ 212 (355)
T cd00611 181 ----VSKF--GV-IYAGAQKNLGPAG--VTVVIV---RKDLLGK 212 (355)
T ss_pred ----HHHh--CE-EEeecccccCCCc--eEEEEE---CHHHHhh
Confidence 1111 23 4466789999877 677765 4554443
No 317
>PRK06917 hypothetical protein; Provisional
Probab=98.07 E-value=0.00084 Score=66.04 Aligned_cols=164 Identities=12% Similarity=0.017 Sum_probs=94.4
Q ss_pred EEeeccchhHHHHHHHHHhhh-----CCC-CeEEEcCCCCcchHHH-HHhcCce------------eeEeeeccCCCC--
Q 047180 121 AVQSLSGTGACRLFADFQKRF-----HPD-SQIYIPVPTWSNHHNI-WRDAHVT------------QRTFHYYHPGTK-- 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~-----~pg-d~Vlv~~P~y~~y~~~-~~~~G~~------------~~~~~~~~~~~~-- 179 (337)
+..+++|++|...++.+.... .+| .+|+...-+|...... +...|.. +..+|.......
T Consensus 94 v~f~~sGsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 173 (447)
T PRK06917 94 SFFVNSGSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPV 173 (447)
T ss_pred EEEeCChHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCccccccc
Confidence 478899999999988765322 023 6899989888886533 2333211 111111000000
Q ss_pred CC--------ChHHHHHHHHcCC--CCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 180 GL--------DFAALMDDIKNAP--NGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 180 ~~--------d~~~l~~~l~~~~--~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
.- +.+.+++.+.... +-..+++=|-..|--|. ..+++-+++|.++|+++|+++|.||+..+|. .+.
T Consensus 174 ~~~~~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~-- 251 (447)
T PRK06917 174 QKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGA-- 251 (447)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccc--
Confidence 00 2345666665332 22344543333333344 5689999999999999999999999998872 221
Q ss_pred cchHHHHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...++++ +|+|.++ .|+ -+|.+++ .+++.+.+
T Consensus 252 --~~a~~~~-gv~PDi~---~~gK~l~-~G~~Pi~a~~~---~~~i~~~~ 291 (447)
T PRK06917 252 --MFAMEHW-GVEPDIM---TLGKGLG-AGYTPIAATVV---SDRVMEPI 291 (447)
T ss_pred --hhhHHhc-CCCCCEE---Eeeehhc-cCCcceEEEEE---cHHHHHHH
Confidence 1111111 1123443 5699998 575 7888875 45554444
No 318
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.07 E-value=0.001 Score=65.58 Aligned_cols=163 Identities=10% Similarity=-0.015 Sum_probs=96.8
Q ss_pred EEeeccchhHHHHHHHHHhhh-----CC-CCeEEEcCCCCcchHH-HHHhcCce------------eeEeeeccCCC--C
Q 047180 121 AVQSLSGTGACRLFADFQKRF-----HP-DSQIYIPVPTWSNHHN-IWRDAHVT------------QRTFHYYHPGT--K 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~-----~p-gd~Vlv~~P~y~~y~~-~~~~~G~~------------~~~~~~~~~~~--~ 179 (337)
+..+++|++|...++.+...+ .+ ..+|+...-+|.+... .+...|.. +..+|..+... +
T Consensus 117 v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 196 (453)
T PRK06943 117 AFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARP 196 (453)
T ss_pred EEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCcccccc
Confidence 567999999999988765321 12 3679999988988642 22222211 11222211000 0
Q ss_pred C--------CChHHHHHHHHcCCCCeEEEEeCCC--CCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 180 G--------LDFAALMDDIKNAPNGSFFLLHACA--HNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 180 ~--------~d~~~l~~~l~~~~~~~~ili~~~p--~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
. -+++.+++.+...+.+...+|+ -| +.-.|. ..+++-+++|.++|++||+++|.||+..+|. .|.
T Consensus 197 ~~~~~~~~~~~~~~l~~~l~~~~~~iAAvii-EPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~-- 273 (453)
T PRK06943 197 GETAADVAARALADVRRLFAERAGKIAALIV-EPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGT-- 273 (453)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCceEEEEE-eccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcc--
Confidence 0 0245666666543333344443 34 555566 5789999999999999999999999998883 221
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...+++++ |+|.++ .| +-+|.+++ .+++.+.+
T Consensus 274 --~fa~~~~-gv~PDivt---~gKgl~-gG~~Pi~av~~---~~ei~~~~ 313 (453)
T PRK06943 274 --FFACEQA-GVWPDFLC---LSKGIS-GGYLPLSLVLS---RDAIFAAF 313 (453)
T ss_pred --hhHHHhC-CCCCCeEe---eehhhc-cCcccceEEEE---cHHHHHhh
Confidence 1111111 22345655 489998 68 58998875 45544443
No 319
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=98.05 E-value=9.5e-05 Score=77.73 Aligned_cols=144 Identities=13% Similarity=0.109 Sum_probs=94.8
Q ss_pred CCCCCCC---CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh------CCCCeEEEcCCCCcc
Q 047180 86 NMEYLPM---GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF------HPDSQIYIPVPTWSN 156 (337)
Q Consensus 86 ~~~Y~~~---~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~------~pgd~Vlv~~P~y~~ 156 (337)
.+.|.|. +|..++.....+|+....+ .+ .+ .++.+||+.+-...+.++... ...++|+++.-.-+.
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltG--md--~~-Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgt 590 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITG--FD--AI-SLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGT 590 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHC--CC--Cc-ccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCc
Confidence 3445543 4555555555555533211 11 12 456777766554333333221 123689999877755
Q ss_pred hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 157 HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 157 y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
....++.+|.+++.++. ++ ++.+|+++|++.++++..+..+|+..+|+| +|..-+ .+++|+++|++++.+++.|-
T Consensus 591 nPasa~~~G~~Vv~V~~-d~-~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDg 665 (939)
T TIGR00461 591 NPASAAMAGMQVVPVNC-DQ-DGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDG 665 (939)
T ss_pred CHHHHHHCCCEEEEecc-CC-CCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEe
Confidence 55668889999999997 33 578999999999975323455555578999 888753 38889999999999999998
Q ss_pred cCC
Q 047180 237 AYQ 239 (337)
Q Consensus 237 ~Y~ 239 (337)
++.
T Consensus 666 Aq~ 668 (939)
T TIGR00461 666 ANM 668 (939)
T ss_pred cCh
Confidence 873
No 320
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.04 E-value=0.00032 Score=68.64 Aligned_cols=147 Identities=14% Similarity=0.130 Sum_probs=83.9
Q ss_pred EEeeccchhHHHHHHHHHhhhCCC-CeEEEc-CCCCcc----hHHHHHhc-Cce--ee--EeeeccCCCCCCChHHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPD-SQIYIP-VPTWSN----HHNIWRDA-HVT--QR--TFHYYHPGTKGLDFAALMDD 189 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pg-d~Vlv~-~P~y~~----y~~~~~~~-G~~--~~--~~~~~~~~~~~~d~~~l~~~ 189 (337)
+..+++|++|...++.+...+ .| ..|+.. .=.|.. |....... |.. .. .+.+ . + -|++.+++.
T Consensus 107 v~f~~sGseA~e~AlklAr~~-tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~-~---~-~d~~~l~~~ 180 (431)
T PRK06209 107 VKFCKNGSDATSAAVRLARAY-TGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF-R---Y-NDIASLEAL 180 (431)
T ss_pred EEEecCHHHHHHHHHHHHHHH-hCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc-C---C-CCHHHHHHH
Confidence 568999999999998765443 34 345443 111211 10000000 100 00 0111 0 1 268888888
Q ss_pred HHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecc
Q 047180 190 IKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSY 269 (337)
Q Consensus 190 l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 269 (337)
+...+.+...++. -|- .|...+.+.+++|.++|+++++++|.||+..+|... . ..........+.+ .+|
T Consensus 181 l~~~~~~~aavi~-Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~-~----~g~~~~~gv~PDi---~t~ 249 (431)
T PRK06209 181 FEDHPGRIACVIL-EPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWH-M----RGAQKLYGIVPDL---SCF 249 (431)
T ss_pred HHhCCCCEEEEEE-ccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcC-c----chhhHHhCCCcce---eee
Confidence 8644333333432 342 455788999999999999999999999998777321 0 0111111112333 567
Q ss_pred cccccccccccceeEe
Q 047180 270 AKNMGLYGQRVGCLSV 285 (337)
Q Consensus 270 SK~~~~~G~RvG~~~~ 285 (337)
||.+| .|+-+|++++
T Consensus 250 gK~lg-gG~p~~av~~ 264 (431)
T PRK06209 250 GKALG-NGFAVSALAG 264 (431)
T ss_pred hhhhc-CCcccEEEEE
Confidence 99999 5888898875
No 321
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.04 E-value=0.0012 Score=65.31 Aligned_cols=163 Identities=11% Similarity=0.047 Sum_probs=96.3
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-C-CCeEEEcCCCCcchHHH-HHhcCce------------eeEeeeccCC--CC
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-P-DSQIYIPVPTWSNHHNI-WRDAHVT------------QRTFHYYHPG--TK 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-p-gd~Vlv~~P~y~~y~~~-~~~~G~~------------~~~~~~~~~~--~~ 179 (337)
+..+++|++|...++.+...+ . + ..+|+...-+|.+.... +...|.. +..+|..... ..
T Consensus 110 v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~ 189 (466)
T PRK07030 110 CFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPE 189 (466)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCcccccc
Confidence 577999999999988765332 1 2 35788889888886432 2222211 1222221100 01
Q ss_pred CC--------ChHHHHHHHHcCCCCeEEEEeCCC--CCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 180 GL--------DFAALMDDIKNAPNGSFFLLHACA--HNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 180 ~~--------d~~~l~~~l~~~~~~~~ili~~~p--~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
+. +++.+++.+...+.....+|. -| +.-.|. ..+++.+++|.++|+++|+++|.||+..+|. .+.
T Consensus 190 ~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~-EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~-- 266 (466)
T PRK07030 190 GMSWEEHSRRMFAHMEQTLAEHHDEIAAVIV-EPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGT-- 266 (466)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCceEEEEE-ecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcccc--
Confidence 11 245566666543333344442 34 344455 5778999999999999999999999998883 221
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...+++++ |+|.++ .| +-+|.+++ ++++.+.+
T Consensus 267 --~~a~~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~~---~~ei~~~~ 306 (466)
T PRK07030 267 --MFACEQA-GIRPDFLC---LSKALT-GGYLPLAAVLT---TDTVYQAF 306 (466)
T ss_pred --chHHHhc-CCCCCEEe---eehhcc-CCcccceEEEe---cHHHHHHH
Confidence 1111111 22245555 489998 68 48998875 45554444
No 322
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.04 E-value=0.00042 Score=67.73 Aligned_cols=164 Identities=11% Similarity=0.017 Sum_probs=93.9
Q ss_pred EEeeccchhHHHHHHHHHhhh-----CCCCeEEEcCCCCcchHHH-HHhcCce-------------eeEeeeccCC---C
Q 047180 121 AVQSLSGTGACRLFADFQKRF-----HPDSQIYIPVPTWSNHHNI-WRDAHVT-------------QRTFHYYHPG---T 178 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~-----~pgd~Vlv~~P~y~~y~~~-~~~~G~~-------------~~~~~~~~~~---~ 178 (337)
+..+++|++|...++.+...+ ....+|+...-+|.+.... +...|.. ++.+|..... .
T Consensus 106 v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 185 (428)
T PRK07986 106 VFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGE 185 (428)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchh
Confidence 578999999999988765443 1236899999999875422 2222211 1112211000 0
Q ss_pred C-CCChHHHHHHHHcCCCCeEEEEeCC-CCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHH
Q 047180 179 K-GLDFAALMDDIKNAPNGSFFLLHAC-AHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIR 254 (337)
Q Consensus 179 ~-~~d~~~l~~~l~~~~~~~~ili~~~-p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~ 254 (337)
+ .-|++.+++.+...+.+...+++-. .+.=.|. ..+++.+++|.++|+++|+++|.||+..+|. .|.. ....
T Consensus 186 ~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~----fa~~ 261 (428)
T PRK07986 186 WDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKL----FACE 261 (428)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCe----eeec
Confidence 1 1145677777754333333444322 1333454 4577999999999999999999999998772 1100 0111
Q ss_pred HhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 255 IFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 255 ~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
.+ ...++++ .|+|.++ .| +-+|.+++ .+++.+.+
T Consensus 262 ~~-gv~PDi~---t~gK~l~-gG~~p~~av~~---~~~i~~~~ 296 (428)
T PRK07986 262 HA-GIAPDIL---CLGKALT-GGTMTLSATLT---TREVAETI 296 (428)
T ss_pred cc-CCCCCEE---Eechhhh-CCcccCcchhc---hHHHHHHh
Confidence 11 1123444 4899997 57 47777654 44544444
No 323
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.03 E-value=0.00084 Score=63.83 Aligned_cols=249 Identities=13% Similarity=0.079 Sum_probs=136.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC--cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG--TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...|||..|.--..-|+ ..|.+.+|+++ ++. .....|. .+.+..+++.+.... + ..++ ++.+++|
T Consensus 42 ~~YlDf~~Giav~~lGH--~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s-~--~~d~--vff~NSG 109 (404)
T COG4992 42 REYLDFAAGIAVNNLGH--CHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELS-P--FADR--VFFCNSG 109 (404)
T ss_pred CEeeeeccceeeeccCC--CCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhC-c--cccE--EEEcCCc
Confidence 46789876642222222 45667666644 321 1112232 234555555553321 1 1244 5789999
Q ss_pred hhHHHHHHHHHhhhCC---CCeEEEcCCCCcchHHHHHhcCceeeE----eeeccCCCCC--CChHHHHHHHHcCCCCeE
Q 047180 128 TGACRLFADFQKRFHP---DSQIYIPVPTWSNHHNIWRDAHVTQRT----FHYYHPGTKG--LDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 128 ~~al~~~~~~l~~~~p---gd~Vlv~~P~y~~y~~~~~~~G~~~~~----~~~~~~~~~~--~d~~~l~~~l~~~~~~~~ 198 (337)
++|...++.+-..+.. .-+|+...=+|.+-....-.++.+... .|+.+.-.+. =|++.+++++.+ +...
T Consensus 110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~--~taA 187 (404)
T COG4992 110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDE--DTAA 187 (404)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhcc--CeEE
Confidence 9999999987666542 237777777776644322222222210 0221110011 178999998874 3444
Q ss_pred EEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc
Q 047180 199 FLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG 277 (337)
Q Consensus 199 ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 277 (337)
+++ =.=+==.|+. .+++-++++-++|++||+++|.||+-.++.-- ...+....+ .-.++++ ++.|.+| .|
T Consensus 188 viv-EPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRT---Gk~fA~e~~-gV~PDI~---tlaK~Lg-GG 258 (404)
T COG4992 188 VIV-EPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRT---GKLFAYEHY-GVEPDIL---TLAKALG-GG 258 (404)
T ss_pred EEE-ecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCcc---chHHHHHHh-CCCCCEE---Eeecccc-CC
Confidence 554 4345666665 46677899999999999999999999888420 111221111 1123443 4689999 79
Q ss_pred cccceeEeeeCCHHHHHHHHHHHHh-hhcccccCCChhHHHHHHHHh---CCHHHHH
Q 047180 278 QRVGCLSVLCEDEKQAVAVKSQLQQ-LARPMYSNPPVHGALIVSTIL---GDAELKK 330 (337)
Q Consensus 278 ~RvG~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~q~~~~~~l---~~~~~~~ 330 (337)
+-+|.++. . +.. .+.+.. ...+++.+ +.++..++..+| .++++.+
T Consensus 259 ~PigA~la--~-~~~----~~~~~~G~HgSTfGG-NpLacAv~~a~l~~l~~e~ll~ 307 (404)
T COG4992 259 FPIGAMLA--T-EEI----ASAFTPGDHGSTFGG-NPLACAVALAVLEVLLEEGLLE 307 (404)
T ss_pred ccceeeEE--c-hhh----hhcCCCCcccCCCCc-CHHHHHHHHHHHHHHcchhHHH
Confidence 99999875 2 221 222221 12345554 556666555544 4555443
No 324
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=98.03 E-value=0.0013 Score=65.74 Aligned_cols=164 Identities=13% Similarity=0.049 Sum_probs=92.4
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-CC-CeEEEcCCCCcchHH-HHHhcCce------------eeEeeeccCCCCC-
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-PD-SQIYIPVPTWSNHHN-IWRDAHVT------------QRTFHYYHPGTKG- 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-pg-d~Vlv~~P~y~~y~~-~~~~~G~~------------~~~~~~~~~~~~~- 180 (337)
+..+++|++|...++.+.... . ++ .+|+..+-.|..... .+...|.. +..+++...-.+.
T Consensus 154 v~f~~SGsEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 233 (504)
T PLN02760 154 VFFTNSGSEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHL 233 (504)
T ss_pred EEEeCChHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCC
Confidence 467899999999988766421 1 23 688999988888643 22333321 1111110000000
Q ss_pred ----------CChHHHHHHHHcC-CCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 181 ----------LDFAALMDDIKNA-PNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 181 ----------~d~~~l~~~l~~~-~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
...+.+++.+... +.+...+|.=.-+.=.|. ..+++-+++|.++|+++|+++|.||+..+|. .|.
T Consensus 234 ~~~~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~-- 311 (504)
T PLN02760 234 PGETEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGT-- 311 (504)
T ss_pred CCCcHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccch--
Confidence 0123455555422 233333433222333354 4678999999999999999999999998873 221
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...++ +.+|+|.+| .| +-+|.+++ ++++.+.+
T Consensus 312 --~~a~e~~-gv~PD---ivtlgK~lg-gG~~PigAv~~---~~~i~d~~ 351 (504)
T PLN02760 312 --MFGCDKY-NIKPD---LVSLAKALS-SAYMPIGAVLV---SPEISDVI 351 (504)
T ss_pred --hhHHHhc-CCCCc---EEEeccccc-CCccccceEee---cHHHHhhh
Confidence 1111111 11233 356799998 46 48898765 45554444
No 325
>PLN02724 Molybdenum cofactor sulfurase
Probab=98.03 E-value=0.00014 Score=76.57 Aligned_cols=172 Identities=14% Similarity=0.107 Sum_probs=102.0
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH---HHhcCceeeEe
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI---WRDAHVTQRTF 171 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~---~~~~G~~~~~~ 171 (337)
+.+.|+.+++++ +-. ++++.++.|.|+++++.+++..+. +.+||+|++..=-++..... ++..|+++..+
T Consensus 80 ~e~aR~~ia~~l-ga~-----~~~~~VvFtsnaT~alnlva~~l~-~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v 152 (805)
T PLN02724 80 IESARQQVLEYF-NAP-----PSDYACVFTSGATAALKLVGETFP-WSSESHFCYTLENHNSVLGIREYALEKGAAAIAV 152 (805)
T ss_pred HHHHHHHHHHHh-CCC-----ccceEEEEeCChHHHHHHHHHHCC-CCCCCeEEEeeccccchHHHHHHHHHcCCeEEec
Confidence 457788888886 321 233346889999999999987663 34899999976666554433 34568888888
Q ss_pred eeccC------CCCCCCh--HHHHHHHH----cC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc-----Cce
Q 047180 172 HYYHP------GTKGLDF--AALMDDIK----NA---PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK-----GHF 231 (337)
Q Consensus 172 ~~~~~------~~~~~d~--~~l~~~l~----~~---~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~-----~~~ 231 (337)
++... ....++. +.+++.++ .. ..+..++..+.-+|-||.+.+.+..+.+.+.+.++ +++
T Consensus 153 ~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~ 232 (805)
T PLN02724 153 DIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWM 232 (805)
T ss_pred cchhccccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceE
Confidence 76311 1112332 44554421 00 12234555588899999999987654444433222 357
Q ss_pred eEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc-ccccccceeEe
Q 047180 232 PFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG-LYGQRVGCLSV 285 (337)
Q Consensus 232 ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~ 285 (337)
+++|-+-. +...+. + +. ..+.. +++.|+=|.|| ..| +|++++
T Consensus 233 v~vDaaQ~-~g~~pi--D---v~---~~~~D-fl~~S~HK~~GgP~G--~G~L~v 275 (805)
T PLN02724 233 VLLDAAKG-CGTSPP--D---LS---RYPAD-FVVVSFYKIFGYPTG--LGALLV 275 (805)
T ss_pred EEeehhhh-cCCCCC--C---hh---hcCCC-EEEEecceeccCCCC--ceEEEE
Confidence 89997632 211111 1 11 11223 44456779998 444 788876
No 326
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.03 E-value=0.0014 Score=62.27 Aligned_cols=204 Identities=16% Similarity=0.062 Sum_probs=122.8
Q ss_pred CCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHH-HHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCC
Q 047180 66 GKPVVLECVREAERRI-AGTANMEYLPMGGSVKMV-EETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHP 143 (337)
Q Consensus 66 ~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr-~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~p 143 (337)
|.....+...++...+ .......|.-..|...-| ..+++..++-. +....++++..+.|+.++...+..
T Consensus 35 G~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~------~aea~~ivnnn~aAVll~~~al~~--- 105 (395)
T COG1921 35 GRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLT------GAEAAAIVNNNAAAVLLTLNALAE--- 105 (395)
T ss_pred CCccCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHhccc------chhheeeECCcHHHHHHHHhhhcc---
Confidence 3444556666665554 222222443333433323 34455544432 122357888888888888877764
Q ss_pred CCeEEEc----C-CCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHH
Q 047180 144 DSQIYIP----V-PTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQW 218 (337)
Q Consensus 144 gd~Vlv~----~-P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~ 218 (337)
+.+|++. . ++-+....+++.+|++++++-.. ......+++.++.+. ..-.+.+. ++|-+--..++ .
T Consensus 106 ~~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~-ta~llkV~-s~~~~f~~~l~---~ 176 (395)
T COG1921 106 GKEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINEN-TALLLKVH-SSNYGFTGMLS---E 176 (395)
T ss_pred CCeEEEEccccccCCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccC-CeeEEEEe-ecccccccccc---H
Confidence 4455443 1 57778889999999999988542 234567788888642 22234442 33432222233 4
Q ss_pred HHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 219 KEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 219 ~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
++++++|+++++.++.|.+-...+.. + +.++.+...+.. +++.|=-|.|| |-+-|.+++ ..+++++++.
T Consensus 177 ~~l~~ia~~~~lpvivD~aSg~~v~~---e--~~l~~~la~GaD-LV~~SgdKllg--GPqaGii~G---kKelI~~lq~ 245 (395)
T COG1921 177 EELVEIAHEKGLPVIVDLASGALVDK---E--PDLREALALGAD-LVSFSGDKLLG--GPQAGIIVG---KKELIEKLQS 245 (395)
T ss_pred HHHHHHHHHcCCCEEEecCCcccccc---c--cchhHHHhcCCC-EEEEecchhcC--CCccceEec---hHHHHHHHHh
Confidence 56888899999999999987666421 1 113334444543 44467789998 889999875 6777777654
No 327
>PRK07678 aminotransferase; Validated
Probab=98.03 E-value=0.0012 Score=64.99 Aligned_cols=163 Identities=13% Similarity=0.065 Sum_probs=93.2
Q ss_pred EEeeccchhHHHHHHHHHhhhC-----CC-CeEEEcCCCCcchHHH-HHhcCce------------eeEeeeccCCC--C
Q 047180 121 AVQSLSGTGACRLFADFQKRFH-----PD-SQIYIPVPTWSNHHNI-WRDAHVT------------QRTFHYYHPGT--K 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~-----pg-d~Vlv~~P~y~~y~~~-~~~~G~~------------~~~~~~~~~~~--~ 179 (337)
+..+++|++|...++.+...+. +| .+|+...-+|.+.... +...|.. +..+|..+... +
T Consensus 108 v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (451)
T PRK07678 108 IFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPG 187 (451)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccc
Confidence 5789999999998886654321 23 5788888888886432 2222211 12222111000 0
Q ss_pred CC-----C---hHHHHHHHHc-CCCCe-EEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 180 GL-----D---FAALMDDIKN-APNGS-FFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 180 ~~-----d---~~~l~~~l~~-~~~~~-~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
+. | .+.+++.+.. .+.+. .+++=|-..+ .|.+ .+++-+++|.++|++||+++|.||+..+|. .|.
T Consensus 188 ~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~-gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~-- 264 (451)
T PRK07678 188 IESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITG-GGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGK-- 264 (451)
T ss_pred cCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCch--
Confidence 00 1 1224555542 22333 3444333333 4554 688999999999999999999999998883 221
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...++++ +|+|.+| .| +-+|.+++ .+++.+.+
T Consensus 265 --~~~~~~~-gv~PDiv---t~gK~lg-gG~~Pi~av~~---~~~i~~~~ 304 (451)
T PRK07678 265 --AFGFMNY-GVKPDII---TMAKGIT-SAYLPLSATAV---KKEIYEAF 304 (451)
T ss_pred --hHHHHhc-CCCCCEE---Eeecccc-cCCcceeEEEE---cHHHHHHH
Confidence 1112211 1124444 5699998 46 68998875 45554444
No 328
>PRK07480 putative aminotransferase; Validated
Probab=98.02 E-value=0.0013 Score=64.83 Aligned_cols=190 Identities=16% Similarity=0.110 Sum_probs=101.2
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-CC-CeEEEcCCCCcchHH-HHHhcCce------------eeEeeeccC--CCC
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-PD-SQIYIPVPTWSNHHN-IWRDAHVT------------QRTFHYYHP--GTK 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-pg-d~Vlv~~P~y~~y~~-~~~~~G~~------------~~~~~~~~~--~~~ 179 (337)
+..+++|++|...++.+...+ . +| .+|+...=+|.+... .+...|.. +..++.... ..+
T Consensus 114 v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 193 (456)
T PRK07480 114 VFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGG 193 (456)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCccccccc
Confidence 567899999999988765443 1 23 468888888877532 22222211 111111000 000
Q ss_pred CCC--------hHHHHHHHHc-CCCCe-EEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 180 GLD--------FAALMDDIKN-APNGS-FFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 180 ~~d--------~~~l~~~l~~-~~~~~-~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
..+ .+.+++.+.. .+... .+++=| -+.-.|. ..+++.+++|.++|++||+++|.||+..+|. .|.
T Consensus 194 ~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EP-iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-- 270 (456)
T PRK07480 194 DMTPEEFGLAAARQLEAKILELGADNVAAFIGEP-IQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGE-- 270 (456)
T ss_pred CCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcc--
Confidence 011 2445444432 22233 344433 3333466 4678889999999999999999999998883 221
Q ss_pred cchHHHHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHHHHHHHh-hhcccccCCChhHHHHHHHHhC
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAVKSQLQQ-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
......+ ...++++ .|+|.++ .|. -+|.+++ ++++.+.+...-.. ....++++ +.++..++.+.|+
T Consensus 271 --~~a~~~~-gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~~i~~~~~~~~~~~~~~~T~~g-npl~~Aaa~a~L~ 338 (456)
T PRK07480 271 --WFGSQHF-GIKPDLM---TIAKGLT-SGYIPMGAVGV---GDRVAEVLIEEGGEFNHGFTYSG-HPVAAAVALANLR 338 (456)
T ss_pred --hhhhhhc-CCCCCee---eeehhhc-cCCccceEEEE---cHHHHHHHhcCCCCcccCCCCCc-CHHHHHHHHHHHH
Confidence 1111111 1123443 5699998 574 7888875 45554444210011 12234443 4555555555553
No 329
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=97.99 E-value=0.00029 Score=67.57 Aligned_cols=212 Identities=16% Similarity=0.119 Sum_probs=124.1
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCC-CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPM-GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
..||+..|-=..--|+ ..|.|.+|+++. ..+ ..|+.+ .---++-+.+++.+ +.+ +.| -.++.||+
T Consensus 54 ~YIDy~~~~Gp~ilGH--~~p~V~~Av~~~l~~G--~~fg~Pte~Ei~~Aell~~~~-----p~~--e~v--rfvnSGTE 120 (432)
T COG0001 54 EYIDYVLGWGPLILGH--AHPAVVEAVQEQLERG--LSFGAPTELEVELAELLIERV-----PSI--EKV--RFVNSGTE 120 (432)
T ss_pred EeeehhccCcccccCC--CCHHHHHHHHHHHHhc--CCCCCCCHHHHHHHHHHHHhc-----Ccc--cEE--EEecchhH
Confidence 4677655521111122 346688877654 443 345432 22223444444432 111 344 46888999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCceee--Eeeecc------CC-C--CC-CChHHHHHHHHcCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHVTQR--TFHYYH------PG-T--KG-LDFAALMDDIKNAPNG 196 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~~~~--~~~~~~------~~-~--~~-~d~~~l~~~l~~~~~~ 196 (337)
|...++++-.-....|+|+...=+|..+...+- .+|.-.- ..|... .+ . .. =|++.+++.+++....
T Consensus 121 AtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~~ 200 (432)
T COG0001 121 ATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGDD 200 (432)
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCCc
Confidence 988887665433346999999999998765443 2331111 101100 00 0 00 1789999998875333
Q ss_pred -eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 197 -SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 197 -~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
..||+=|-+.|=-=+...++.++.|.++|+++|.++|.||+-.+|... + ...+.. + ...+++ ..|.|..|
T Consensus 201 IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~-~-gGaq~~--~-gi~PDl---ttlGKiIG- 271 (432)
T COG0001 201 IAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVA-L-GGAQGY--Y-GVEPDL---TTLGKIIG- 271 (432)
T ss_pred EEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccC-C-cccccc--c-CcCcch---hhhhhhhc-
Confidence 456666777774444567788999999999999999999998887532 1 111111 1 111223 46899999
Q ss_pred cccccceeEe
Q 047180 276 YGQRVGCLSV 285 (337)
Q Consensus 276 ~G~RvG~~~~ 285 (337)
.|+-+|.+.+
T Consensus 272 GGlP~ga~gG 281 (432)
T COG0001 272 GGLPIGAFGG 281 (432)
T ss_pred CCcceeeecc
Confidence 8999998754
No 330
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=97.97 E-value=0.0012 Score=64.29 Aligned_cols=218 Identities=16% Similarity=0.119 Sum_probs=119.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCc--CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGT--ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...||+..|.--..-| ...|.|.+|+++ ++.- ....|.......+|-+.+.+.+-+.. .+ .++.+++|
T Consensus 56 ~~ylDf~sgi~v~~~G--H~hP~Vv~Av~~q~~~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~-----~~--~~~f~~sG 126 (447)
T COG0160 56 NEYLDFLSGIAVLNLG--HNHPRVVEAVKRQLAKLNHTHTRDLYYEPYVELAEKLTALAPGSG-----LK--KVFFGNSG 126 (447)
T ss_pred CEEEEcccCcchhccC--CCCHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHhCCccc-----CC--eEEecCCc
Confidence 4568887753111112 234666666654 4221 22334333233344444444332111 12 25789999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCce-------------eeEeeeccCCC--CCC--------Ch
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHVT-------------QRTFHYYHPGT--KGL--------DF 183 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~~-------------~~~~~~~~~~~--~~~--------d~ 183 (337)
++|..+++.+-........|+...=.|.+-.. .+..+|.. ++.+|+.++-. ++. ..
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~ 206 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL 206 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence 99999998766544345788888888877543 22222221 44444422211 121 12
Q ss_pred HHHHHHHHc---CCCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc
Q 047180 184 AALMDDIKN---APNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD 259 (337)
Q Consensus 184 ~~l~~~l~~---~~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 259 (337)
+.++..+.. .+.....+|.=.=+.=.|. +.+++-+++|.++|++||+++|.||+-.+|.-- ...+....+ ..
T Consensus 207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRT---G~~fa~E~~-gv 282 (447)
T COG0160 207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRT---GKMFAFEHF-GV 282 (447)
T ss_pred HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc---ccchhhhhc-CC
Confidence 334443332 1223344443434555555 467788899999999999999999999888521 112222221 11
Q ss_pred CCeEEEEecccccccccccccceeEe
Q 047180 260 GHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 260 ~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
.+++| ++||.+|- |+-+|.++.
T Consensus 283 ~PDiv---t~aK~ig~-G~Pl~avv~ 304 (447)
T COG0160 283 EPDIV---TLAKSLGG-GLPLSAVVG 304 (447)
T ss_pred CCCEE---EecccccC-CCceeEEec
Confidence 23444 47999994 999999875
No 331
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.97 E-value=0.0023 Score=63.26 Aligned_cols=154 Identities=13% Similarity=0.032 Sum_probs=91.3
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH-HHhcCc------------eeeEeeeccCCC--CC------
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI-WRDAHV------------TQRTFHYYHPGT--KG------ 180 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~-~~~~G~------------~~~~~~~~~~~~--~~------ 180 (337)
+.+++|++|...++++........+|+...-+|.+.... +...|. .+..+|+..... ++
T Consensus 131 f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 210 (464)
T PRK06938 131 FCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAG 210 (464)
T ss_pred EeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhH
Confidence 334789999999987655432346888888888886532 222221 112222211000 01
Q ss_pred --CChHHHHHHHHcCC----CCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHH
Q 047180 181 --LDFAALMDDIKNAP----NGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKA 252 (337)
Q Consensus 181 --~d~~~l~~~l~~~~----~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~ 252 (337)
.+++.+++.+.+.. .-..+++=|-..+- |. ..+++-+++|.++|+++|+++|.||+..+|. .| ....
T Consensus 211 ~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~g-G~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG----~~~a 285 (464)
T PRK06938 211 VRANLHYLENLLDDPESGVVLPAAVILEVVQGEG-GVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTG----KMFA 285 (464)
T ss_pred HHHHHHHHHHHHHhhccCCCceEEEEEccccCCC-CCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc----HHHH
Confidence 12566777665321 12344443433332 55 4679999999999999999999999999883 22 1111
Q ss_pred HHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 253 IRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 253 ~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
...+ ...+++++ ++|.+| .|+-+|.+++
T Consensus 286 ~e~~-gv~PDiv~---~gKglg-gG~PlsAv~~ 313 (464)
T PRK06938 286 FEHA-GIIPDVVV---LSKAIG-GSLPLAVVVY 313 (464)
T ss_pred HHhc-CCCCCEEE---eecccc-CCCceEEEee
Confidence 1111 12245555 489998 6899999875
No 332
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.94 E-value=0.00087 Score=65.57 Aligned_cols=163 Identities=12% Similarity=0.013 Sum_probs=94.3
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-CC-CeEEEcCCCCcchHH-HHHhcCce-------------eeEeeeccCCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-PD-SQIYIPVPTWSNHHN-IWRDAHVT-------------QRTFHYYHPGTKG 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-pg-d~Vlv~~P~y~~y~~-~~~~~G~~-------------~~~~~~~~~~~~~ 180 (337)
+..+++|++|...++.+.... . +| .+|+...-+|.+... .+...|.. +..+|.... .+.
T Consensus 107 v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~ 185 (429)
T PRK06173 107 IFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSI-KFG 185 (429)
T ss_pred EEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCc-ccc
Confidence 578999999999888665432 1 23 578888988988532 22222210 111221100 011
Q ss_pred -----CChHHHHHHHHcCCCCeEEEEeCCC--CCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHH
Q 047180 181 -----LDFAALMDDIKNAPNGSFFLLHACA--HNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKA 252 (337)
Q Consensus 181 -----~d~~~l~~~l~~~~~~~~ili~~~p--~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~ 252 (337)
-+++.+++.+...+.+...++. -| +.-.|.. .+++-+++|.++|++||+++|.||+..+|... .....
T Consensus 186 ~~~~~~~l~~l~~~i~~~~~~iAAvi~-EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~Grt---G~~~a 261 (429)
T PRK06173 186 EEWNDEAIEPLQDLLEQKGDEIAALIL-EPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRT---GKLFA 261 (429)
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEE-cchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcC---CcchH
Confidence 1355666777543334444443 34 5555665 79999999999999999999999999876311 11111
Q ss_pred HHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHH
Q 047180 253 IRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 253 ~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~ 296 (337)
...+ ...+++++ |+|.++ .|. -+|.+++ ++++.+.+
T Consensus 262 ~~~~-gv~PDiv~---~gK~l~-gG~~p~~a~~~---~~~i~~~~ 298 (429)
T PRK06173 262 LEHA-GVVPDIMC---IGKALT-GGYLTLSATIT---TEAIAQTI 298 (429)
T ss_pred HHhc-CCCCCEEE---eehhhh-CCccccceEEe---cHHHHHHH
Confidence 1111 11234443 899997 674 5666654 44444433
No 333
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.94 E-value=0.0015 Score=64.46 Aligned_cols=163 Identities=12% Similarity=0.053 Sum_probs=96.8
Q ss_pred EEeeccchhHHHHHHHHHhhh-----CC-CCeEEEcCCCCcchHH-HHHhcCce------------eeEeeeccCC--CC
Q 047180 121 AVQSLSGTGACRLFADFQKRF-----HP-DSQIYIPVPTWSNHHN-IWRDAHVT------------QRTFHYYHPG--TK 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~-----~p-gd~Vlv~~P~y~~y~~-~~~~~G~~------------~~~~~~~~~~--~~ 179 (337)
+..+++|++|...++.+.... .+ ..+|+...-+|.+... .+...|.. +..+|..+.. .+
T Consensus 119 v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~ 198 (460)
T PRK06916 119 VFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPY 198 (460)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCccccccc
Confidence 578999999999988765432 13 3688999988888543 23333211 1222211000 01
Q ss_pred C--------CChHHHHHHHHcCCCCeEEEEeCCC--CCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 180 G--------LDFAALMDDIKNAPNGSFFLLHACA--HNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 180 ~--------~d~~~l~~~l~~~~~~~~ili~~~p--~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
. -+++.+++.+...+.....++. -| +.-.|.+ ++++-|++|.++|+++|+++|.||+..+|. .|
T Consensus 199 ~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~-EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG--- 274 (460)
T PRK06916 199 GNDKAEIVKKHLEELEELLKEKHEEIAAIIV-EPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTG--- 274 (460)
T ss_pred CCChHHHHHHHHHHHHHHHHhCCCcEEEEEE-eccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCc---
Confidence 1 1245566666543333343432 34 4555665 699999999999999999999999998873 22
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
.......+ ...++++ .++|.++ .| +-+|.+++ .+++.+.+
T Consensus 275 -~~~a~~~~-gv~PDiv---~~gK~l~-gG~~Pi~av~~---~~ei~~~~ 315 (460)
T PRK06916 275 -KMFACEHE-NVTPDIM---TAGKGLT-GGYLPIAITVT---TDEIYNAF 315 (460)
T ss_pred -hhhHHHhc-CCCCCee---eeehhhh-cCccccceeee---cHHHHHHh
Confidence 11111111 1224554 4699998 68 48998875 45554444
No 334
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=97.93 E-value=0.00057 Score=65.05 Aligned_cols=143 Identities=13% Similarity=-0.051 Sum_probs=87.2
Q ss_pred EEeecc-chhHHHHHHHHHhhhCCCCeEEEcCCCCcch--HHHHHhcCceeeEeeeccC--CCCCCChHHHHHHHHcCCC
Q 047180 121 AVQSLS-GTGACRLFADFQKRFHPDSQIYIPVPTWSNH--HNIWRDAHVTQRTFHYYHP--GTKGLDFAALMDDIKNAPN 195 (337)
Q Consensus 121 ~~~t~g-~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y--~~~~~~~G~~~~~~~~~~~--~~~~~d~~~l~~~l~~~~~ 195 (337)
++++.| |++++..++.-+.. +||++++..=+..+. ..+++..|. ++.+...+. ....+|++.++. .++
T Consensus 58 v~~~~gsgT~a~ea~~~nl~~--~~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~~----~~~ 130 (349)
T TIGR01364 58 VLFLQGGATGQFAAVPLNLLA--EGKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWEI----SED 130 (349)
T ss_pred EEEEcCCchHHHHHHHHhcCC--CCCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcCC----CCC
Confidence 456655 89999999866554 788887776555443 457778888 666554211 122445554441 123
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
.+.+. .+...|.||...+ ++++.++.++++|-+-. +...+.+ +.+. + +++.|.-|.||.
T Consensus 131 ~~~v~-~th~ETstGv~~~--------~l~~~~~~l~iVDavss-~g~~~id--------~~~~-d--~~~~ssqK~lgP 189 (349)
T TIGR01364 131 AAYVH-YCANETIHGVEFR--------ELPDVKNAPLVADMSSN-ILSRPID--------VSKF-G--LIYAGAQKNIGP 189 (349)
T ss_pred CCEEE-EcCCCCcccEecc--------eecccCCCeEEEEcccc-ccCccCC--------HHHc-c--EEEEecccccCC
Confidence 33433 3666899999765 55666899999997643 2211111 1122 2 667777899998
Q ss_pred cccccceeEeeeCCHHHHHHH
Q 047180 276 YGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+| +|++++ +++.++++
T Consensus 190 ~G--lg~l~~---s~~~~~~~ 205 (349)
T TIGR01364 190 AG--LTVVIV---RKDLLGRA 205 (349)
T ss_pred Cc--eEEEEE---CHHHHhhc
Confidence 88 677765 45555443
No 335
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=97.92 E-value=0.0009 Score=63.04 Aligned_cols=208 Identities=18% Similarity=0.178 Sum_probs=125.5
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCC---CCC------HHHHHHHHHHHhCCCCcccccCceeE
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPM---GGS------VKMVEETLKLAYGDNSEFIKDKRIAA 121 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~---~G~------~~lr~aia~~~~~~~~~~~~~~~i~~ 121 (337)
..|+|-..+ -++.++|.+|.-.. ......+|+-- .|. +.|-..-+..+|+-. .. .
T Consensus 27 ~~ieLIASE-------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~-------~a-n 91 (413)
T COG0112 27 EHIELIASE-------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAE-------YA-N 91 (413)
T ss_pred hceeeeecc-------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCC-------cc-c
Confidence 467776543 35778888887553 22223344321 232 223333344455543 22 2
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH---HhcC--ceeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW---RDAH--VTQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~---~~~G--~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
++-.+|++|-.....+|.+ |||+|+-.+-...+|...- ...| .++++|++ +.++..+|.|++++...+.+ .
T Consensus 92 VQPhSGs~AN~av~~All~--pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~v-d~et~~IDyD~~~k~a~e~k-P 167 (413)
T COG0112 92 VQPHSGSQANQAVYLALLQ--PGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGV-DPETGLIDYDEVEKLAKEVK-P 167 (413)
T ss_pred cCCCCchHHHHHHHHHHcC--CCCeEecccCCCCCcccCCCCCCccceeEEeEeccc-ccccCccCHHHHHHHHHHhC-C
Confidence 5677788887777777777 9999999999888886432 2233 35777877 44578899999999877543 2
Q ss_pred eEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 197 SFFLLHACAHNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
+++++ . +..|+ .-+++++.++|.+-|.+++.|.++. +|+-+.... .|++. -=++.+|--|+|.
T Consensus 168 K~ii~-G------~SaY~r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p--~P~~~------AdvVTtTTHKTlr 232 (413)
T COG0112 168 KLIIA-G------GSAYSRPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHP--NPLPH------ADVVTTTTHKTLR 232 (413)
T ss_pred CEEEE-C------ccccccccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCC--CCCCc------cceEeCCcccCCC
Confidence 34443 2 22222 2468888899999999999999873 444321111 11111 1245567789984
Q ss_pred ccccccceeEeeeCCHHHHHHHH
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
|=|=|.+.. .++++.+++.
T Consensus 233 --GPrGG~Il~--~~eel~kkin 251 (413)
T COG0112 233 --GPRGGIILT--NDEELAKKIN 251 (413)
T ss_pred --CCCceEEEe--ccHHHHHHhh
Confidence 889887764 4445544443
No 336
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=97.92 E-value=0.00016 Score=69.52 Aligned_cols=203 Identities=19% Similarity=0.157 Sum_probs=106.1
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCC---CCCC------HHHHHHHHHHHhCCCCcccccCceeE
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLP---MGGS------VKMVEETLKLAYGDNSEFIKDKRIAA 121 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~---~~G~------~~lr~aia~~~~~~~~~~~~~~~i~~ 121 (337)
..|+|--.+ -.+.|.+.+++... ......+|+- ..|. +.+-+.-+.-+|+-. + ++..+ .
T Consensus 21 ~~l~LiaSE-------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~-~--~~w~a-n 89 (399)
T PF00464_consen 21 STLNLIASE-------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAE-P--KEWYA-N 89 (399)
T ss_dssp HSEE-CTT------------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-S-T--TTEEE-E
T ss_pred cCccccCcc-------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCC-c--ccceE-E
Confidence 457776543 34667788776543 2222223321 1242 222333333455543 1 11122 4
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----------HhcCceeeEeeeccCCCCCCChHHHHHHHH
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----------RDAHVTQRTFHYYHPGTKGLDFAALMDDIK 191 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----------~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~ 191 (337)
+...+|+.|...++..|.+ |||+|+..++...++...= .-...+.++|++ +++++.+|.+++++.+.
T Consensus 90 vqp~SGs~An~av~~aLl~--pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~-d~~~~~ID~d~l~~~a~ 166 (399)
T PF00464_consen 90 VQPHSGSQANLAVYMALLK--PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPV-DPDTGLIDYDELEKLAK 166 (399)
T ss_dssp ---SSHHHHHHHHHHHHT---TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB--TTTSSB-HHHHHHHHH
T ss_pred eecCCchHHHHHHHHHHHh--hcCcEEecChhhcccccccccccccccccccceEEEEeeee-ecCCCeECHHHHHHHHh
Confidence 6788888888888877777 9999999999887774311 112356888888 44578999999999887
Q ss_pred cCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEeccc
Q 047180 192 NAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQSYA 270 (337)
Q Consensus 192 ~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 270 (337)
..++ ++|++ . .++ ..-.-+++++.++|.+.+.+|+.|-++. +|+.+.... .++. . -+ |+..|.-
T Consensus 167 ~~kP-klIi~-G-~S~----y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~-----~P~~-~-AD-vvt~sTh 231 (399)
T PF00464_consen 167 EHKP-KLIIC-G-ASS----YPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFP-----NPFP-Y-AD-VVTGSTH 231 (399)
T ss_dssp HH---SEEEE-E--SS----TSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS-------GCC-T-SS-EEEEESS
T ss_pred hcCC-CEEEE-C-chh----ccCccCHHHHHHHHHhcCcEEEecccccccceehheec-----Cccc-c-ce-EEEeecc
Confidence 6433 45554 3 222 2233568889999999999999998863 343221111 1121 1 13 5567788
Q ss_pred ccccccccccceeEe
Q 047180 271 KNMGLYGQRVGCLSV 285 (337)
Q Consensus 271 K~~~~~G~RvG~~~~ 285 (337)
|+| +|=|-|.++.
T Consensus 232 Ktl--~GPrggiI~~ 244 (399)
T PF00464_consen 232 KTL--RGPRGGIILT 244 (399)
T ss_dssp GGG---SSS-EEEEE
T ss_pred ccc--cccCceEEEE
Confidence 998 4889888765
No 337
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.92 E-value=0.0002 Score=76.19 Aligned_cols=137 Identities=11% Similarity=0.043 Sum_probs=90.2
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh--hCCCC----eEEEcCCCCcchHHHHHhcCc
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR--FHPDS----QIYIPVPTWSNHHNIWRDAHV 166 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~--~~pgd----~Vlv~~P~y~~y~~~~~~~G~ 166 (337)
+|..++...+.+|+..-.+ . +.+ .++.+||+.+-...+.++.. ..+|| +|++++-.++.....++..|.
T Consensus 538 qG~l~~i~e~q~~l~eltG--~--d~~-sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~ 612 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITG--Y--DAV-SLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGM 612 (954)
T ss_pred HHHHHHHHHHHHHHHHHHC--C--CCE-EECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCC
Confidence 4555555555666533222 1 233 35666776665443333332 12555 699999988777778899999
Q ss_pred eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC
Q 047180 167 TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 167 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
+++.+++. . +..+|+++|++++.....+.+.++..+|++= -.-.+.+++|+++|+++|+++++|.++.
T Consensus 613 ~vv~v~~d-~-~G~iD~~~L~~~i~~~~~~la~V~it~pst~---G~~e~~I~eI~~i~h~~G~~v~VDgA~~ 680 (954)
T PRK05367 613 KVVVVACD-E-NGNIDLDDLRAKAEEHADNLAAIMITYPSTH---GVFEETIREICEIVHEHGGQVYLDGANM 680 (954)
T ss_pred EEEEECCC-C-CCCcCHHHHHHHHhccCCCeEEEEEEcCCCC---eeecCCHHHHHHHHHHcCCEEEEECcCh
Confidence 99999873 3 4689999999988753333444454555443 2223458899999999999999999984
No 338
>PRK06105 aminotransferase; Provisional
Probab=97.92 E-value=0.0021 Score=63.42 Aligned_cols=163 Identities=15% Similarity=0.110 Sum_probs=92.3
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-C-CCeEEEcCCCCcchHHHH-HhcCce------------eeEeeeccCCCCC-
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-P-DSQIYIPVPTWSNHHNIW-RDAHVT------------QRTFHYYHPGTKG- 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-p-gd~Vlv~~P~y~~y~~~~-~~~G~~------------~~~~~~~~~~~~~- 180 (337)
+..+++|++|...++.+.... . + ..+|+...=+|.+..... ...|.. +..+|..+...+.
T Consensus 112 v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 191 (460)
T PRK06105 112 VFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGL 191 (460)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCccccccc
Confidence 567999999999998764322 1 2 257888888887764222 222211 1111111000000
Q ss_pred ----------CChHHHHHHHHcC-CCCe-EEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCC
Q 047180 181 ----------LDFAALMDDIKNA-PNGS-FFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDP 246 (337)
Q Consensus 181 ----------~d~~~l~~~l~~~-~~~~-~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~ 246 (337)
..++.+++.+... +.+. .+++=+ -+.-.|.+ .+++-+++|.++|+++|+++|.||++.+|. .|.
T Consensus 192 ~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEP-iqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~- 269 (460)
T PRK06105 192 PGESEEAFATRLANELEALILAEGPDTIAAFIGEP-VMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGN- 269 (460)
T ss_pred CCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEcc-ccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCch-
Confidence 0134566666422 2333 344423 23334554 689999999999999999999999998873 221
Q ss_pred ccchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...++++ .|||.++ .| +-+|.+++ ++++.+.+
T Consensus 270 ---~f~~~~~-~v~PDi~---~~gK~lg-gG~~P~~av~~---~~~i~~~~ 309 (460)
T PRK06105 270 ---MFGCETF-GIKPDIL---VMSKQLS-SSYQPLSAVLM---NEKVYDPI 309 (460)
T ss_pred ---hhhHHhc-CCCCCee---eeecccc-cCcccceEEEE---cHHHHHHH
Confidence 1111111 1123433 5799998 46 57888875 45554444
No 339
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=97.91 E-value=0.0028 Score=62.59 Aligned_cols=155 Identities=18% Similarity=0.142 Sum_probs=89.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCc------------eeeEeeeccCCC--CC----C
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHV------------TQRTFHYYHPGT--KG----L 181 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~------------~~~~~~~~~~~~--~~----~ 181 (337)
.+.+++|++|...++.+.......++|+...-+|.+...... ..|. .+..+|..+... +. -
T Consensus 124 ~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (459)
T PRK06931 124 QFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEA 203 (459)
T ss_pred EEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchh
Confidence 356689999999998765544344689989989988764333 2221 112222211100 00 0
Q ss_pred ChHHH----HHHHHc---CCC-CeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchH
Q 047180 182 DFAAL----MDDIKN---APN-GSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAK 251 (337)
Q Consensus 182 d~~~l----~~~l~~---~~~-~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~ 251 (337)
+.+.+ ++.+.. .+. -..+++=|-..+- |. ..+++-+++|.++|+++|+++|.||+..+|. .|. ..
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~g-G~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~----~~ 278 (459)
T PRK06931 204 GVKALTYYFENFIEDVESGVRKPAAVILEAIQGEG-GVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGK----MF 278 (459)
T ss_pred HHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCC-CCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCch----HH
Confidence 12222 222221 112 2345554544443 44 5689999999999999999999999998883 221 11
Q ss_pred HHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
....+ ...+++++ ++|.++ .|+-+|.++.
T Consensus 279 a~~~~-gv~PDivt---~gK~l~-gG~Pi~av~~ 307 (459)
T PRK06931 279 AFEHA-GIEPDIIV---MSKAVG-GGLPLAVLGI 307 (459)
T ss_pred Hhhhc-CCCCCEEE---eccccc-CCcceeeeee
Confidence 11111 11244544 589998 6899997653
No 340
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=97.87 E-value=0.0023 Score=62.93 Aligned_cols=164 Identities=15% Similarity=0.073 Sum_probs=93.7
Q ss_pred EEeeccchhHHHHHHHHHhhhC-----C-CCeEEEcCCCCcchHH-HHHhcCc------------eeeEeeecc-CCC--
Q 047180 121 AVQSLSGTGACRLFADFQKRFH-----P-DSQIYIPVPTWSNHHN-IWRDAHV------------TQRTFHYYH-PGT-- 178 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~-----p-gd~Vlv~~P~y~~y~~-~~~~~G~------------~~~~~~~~~-~~~-- 178 (337)
+..+++|++|...++.+...+. + ..+|+...-+|.+... .+...|. .+..+|... ...
T Consensus 109 v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 188 (442)
T PRK13360 109 VFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNA 188 (442)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccc
Confidence 5789999999999886554331 2 2579989988888642 2222221 112222210 000
Q ss_pred CCC--------ChHHHHHHHHcC-CCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 179 KGL--------DFAALMDDIKNA-PNGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 179 ~~~--------d~~~l~~~l~~~-~~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
+.. ..+.+++.+... +.+...++.-.-+--.|.. .+++.+++|.++|+++|+++|.||+..+|. .|..
T Consensus 189 ~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~- 267 (442)
T PRK13360 189 FSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAP- 267 (442)
T ss_pred cCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccc-
Confidence 111 134666666532 2333344433233334554 678999999999999999999999998873 2211
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
.....+ ...++++ +|||.++ .| +-+|.+++ ++++.+.+
T Consensus 268 ---~a~~~~-gv~PDiv---t~gK~l~-gG~~P~gav~~---~~~i~~~~ 306 (442)
T PRK13360 268 ---FAAQYF-GVTPDLL---TCAKGLT-NGAIPMGAVFV---SSEIHDAF 306 (442)
T ss_pred ---hhhhhc-CCCCcee---eeeeccc-cCccceEEEEE---cHHHHHHh
Confidence 111111 1123333 7899998 46 67888765 45554444
No 341
>PRK07481 hypothetical protein; Provisional
Probab=97.86 E-value=0.0045 Score=60.97 Aligned_cols=163 Identities=17% Similarity=0.157 Sum_probs=91.3
Q ss_pred EEeeccchhHHHHHHHHHhhhC-----CC-CeEEEcCCCCcchHH-HHHhcCce------------eeEeeeccCC--CC
Q 047180 121 AVQSLSGTGACRLFADFQKRFH-----PD-SQIYIPVPTWSNHHN-IWRDAHVT------------QRTFHYYHPG--TK 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~-----pg-d~Vlv~~P~y~~y~~-~~~~~G~~------------~~~~~~~~~~--~~ 179 (337)
+..+++|++|...++.+..... +| .+|+...=+|.+... .+...|.. +..++..... .+
T Consensus 107 v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 186 (449)
T PRK07481 107 VFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPF 186 (449)
T ss_pred EEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCccccccc
Confidence 5789999999999887654321 23 578888888888543 22222211 1112210000 01
Q ss_pred C-CChHHH--------HHHHH-cCCCC-eEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCC
Q 047180 180 G-LDFAAL--------MDDIK-NAPNG-SFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDP 246 (337)
Q Consensus 180 ~-~d~~~l--------~~~l~-~~~~~-~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~ 246 (337)
. -|++.+ ++.+. ..++. ..+++=| -+.=.|. ..+++-+++|.++|+++|+++|.||+..+|. .+.
T Consensus 187 ~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEP-vqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~- 264 (449)
T PRK07481 187 TEQDPEELARICARLLEREIAFQGPDTIAAFIAEP-VQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGS- 264 (449)
T ss_pred CCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEec-ccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCch-
Confidence 1 133333 33332 11223 3444433 2333455 5688899999999999999999999998873 210
Q ss_pred ccchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...+++++ ++|.++ .| +-+|.+++ .+++.+.+
T Consensus 265 ---~~a~~~~-gv~PDiv~---~gKgl~-gG~~Pi~av~~---~~~i~~~~ 304 (449)
T PRK07481 265 ---WFGSRGW-GVKPDIMC---LAKGIT-SGYVPLGATMV---NARIADAF 304 (449)
T ss_pred ---hhHhhhc-CCCCCEEE---Eeeccc-CCCcCceEEEE---cHHHHHHH
Confidence 1111111 11244544 589998 57 58998875 34444443
No 342
>PRK07483 hypothetical protein; Provisional
Probab=97.84 E-value=0.0025 Score=62.64 Aligned_cols=164 Identities=15% Similarity=0.156 Sum_probs=91.6
Q ss_pred EEeeccchhHHHHHHHHHhhhC-----CC-CeEEEcCCCCcchHH-HHHhcCce------------eeEeeeccCCCC--
Q 047180 121 AVQSLSGTGACRLFADFQKRFH-----PD-SQIYIPVPTWSNHHN-IWRDAHVT------------QRTFHYYHPGTK-- 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~-----pg-d~Vlv~~P~y~~y~~-~~~~~G~~------------~~~~~~~~~~~~-- 179 (337)
+..+++|++|...++.+...+. +| .+|+...-+|.+... .+...|.. +..+|....-+.
T Consensus 93 v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 172 (443)
T PRK07483 93 VYFVSGGSEAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQR 172 (443)
T ss_pred EEEcCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccc
Confidence 5679999999999887655431 23 578888888887642 22222211 111111000000
Q ss_pred -CCC--------hHHHHHHHHc-CCCCe-EEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCC
Q 047180 180 -GLD--------FAALMDDIKN-APNGS-FFLLHACAHNPTG-VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDP 246 (337)
Q Consensus 180 -~~d--------~~~l~~~l~~-~~~~~-~ili~~~p~NPTG-~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~ 246 (337)
..+ ++.+++.+.. .+... .+++=|-..+=.| ...+++.+++|.++|++||+++|.||+..+|. .|
T Consensus 173 ~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG-- 250 (443)
T PRK07483 173 AGESDEAYGQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTG-- 250 (443)
T ss_pred cCCCHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCc--
Confidence 000 2455554532 22233 3444222111124 56789999999999999999999999998883 21
Q ss_pred ccchHHHHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHH
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~ 296 (337)
.......+ ...+++++ |+|.++ .|+ -+|.+++ .+++.+.+
T Consensus 251 --~~~a~~~~-gv~PDiv~---~gK~l~-gG~~Pi~av~~---~~~i~~~~ 291 (443)
T PRK07483 251 --TLFACEED-GVAPDLVT---IAKGLG-AGYQPIGAVLA---SDRIYDAI 291 (443)
T ss_pred --HHHHHhhc-CCCCCeee---ehhhhc-cCccccEEEEE---cHHHHHHH
Confidence 11111111 11244544 589998 685 8998875 44444433
No 343
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.84 E-value=0.0012 Score=65.37 Aligned_cols=163 Identities=12% Similarity=0.021 Sum_probs=97.3
Q ss_pred EEeeccchhHHHHHHHHHhhhC-----C-CCeEEEcCCCCcchHHHH-HhcCce------------eeEeeeccCC--CC
Q 047180 121 AVQSLSGTGACRLFADFQKRFH-----P-DSQIYIPVPTWSNHHNIW-RDAHVT------------QRTFHYYHPG--TK 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~-----p-gd~Vlv~~P~y~~y~~~~-~~~G~~------------~~~~~~~~~~--~~ 179 (337)
+..+++|++|...++.+...+. + ..+|+...-+|.+..... ...|.. +..+|..+.. .+
T Consensus 132 v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~ 211 (472)
T PRK08742 132 VFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEP 211 (472)
T ss_pred EEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCcccccc
Confidence 5789999999999887654431 2 268999998898875322 222211 1122221100 01
Q ss_pred CC--------ChHHHHHHHHcCCCCeEEEEeCCC--CCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 180 GL--------DFAALMDDIKNAPNGSFFLLHACA--HNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 180 ~~--------d~~~l~~~l~~~~~~~~ili~~~p--~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
+. +++.+++.+...+.....+|. -| ++-.|. ..+++.+++|.++|+++|+++|.||+..+|. .|.
T Consensus 212 ~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~-EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~-- 288 (472)
T PRK08742 212 GQSAEDYALQAADALQALFEQSPGEICALIL-EPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGT-- 288 (472)
T ss_pred CCCHHHHHHHHHHHHHHHHHhCCCceEEEEE-ccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCcc--
Confidence 11 245566666533333344443 34 555566 5789999999999999999999999998884 221
Q ss_pred cchHHHHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...+++++ |+|.++ .|+ -+|.+++ ++++.+.+
T Consensus 289 --~~a~e~~-gv~PDiv~---~gKgl~-gG~~Plaav~~---~~ei~~~~ 328 (472)
T PRK08742 289 --LFACEQA-GVMPDLLC---LSKGLT-GGFLPLSAVLA---TQQLYDAF 328 (472)
T ss_pred --chHHHhc-CCCCCEEE---Eccccc-CCCCCcceeec---cHHHHHHh
Confidence 1111111 22345555 489998 584 7888875 45554443
No 344
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=97.84 E-value=0.00073 Score=64.01 Aligned_cols=216 Identities=14% Similarity=0.071 Sum_probs=110.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCC-CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLP-MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
...+|+..|.-...-| .-.|.+.+++++ +... .|.. .....+.+..+++.+...- +. ..++ +..+++|+
T Consensus 16 ~~~lD~~~~~~~~~lG--h~~p~i~~ai~~~~~~~---~~~~~~~~~~~~~~~la~~L~~~~-p~-~~~~--v~f~~sGs 86 (339)
T PF00202_consen 16 REYLDFMSGYGSVNLG--HNHPEIAEAIAEQANKL---NYVSFSGFTHPEAAELAEKLAELF-PG-GLDR--VFFANSGS 86 (339)
T ss_dssp EEEEESSHHHHTTTT---BT-HHHHHHHHHHHHHC---SSCSTTTSEEHHHHHHHHHHHHHS-ST-TEEE--EEEESSHH
T ss_pred CEEEECCCCccceecC--CCccccchhHHHHhhhc---ccccccceeccchhhhhhhhhhcc-cc-ccce--eeeccCch
Confidence 3467876553211111 234566666554 3211 1222 2223345555566553321 10 1123 56789999
Q ss_pred hHHHHHHHHHh------hhCCCCeEEEcCCCCcchHH-HHHhcCc------------eeeEeeeccCCC---CCCChHHH
Q 047180 129 GACRLFADFQK------RFHPDSQIYIPVPTWSNHHN-IWRDAHV------------TQRTFHYYHPGT---KGLDFAAL 186 (337)
Q Consensus 129 ~al~~~~~~l~------~~~pgd~Vlv~~P~y~~y~~-~~~~~G~------------~~~~~~~~~~~~---~~~d~~~l 186 (337)
+|+..++.+.. ....-..|+...-+|..... .+...+- .+..+|+.+... ..-..+.+
T Consensus 87 eAve~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 166 (339)
T PF00202_consen 87 EAVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNAL 166 (339)
T ss_dssp HHHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHH
Confidence 99999986554 21134799999999987653 2222221 123333311000 00001112
Q ss_pred HHHHHc--CCCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHHHhhhcCCe
Q 047180 187 MDDIKN--APNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIRIFLKDGHL 262 (337)
Q Consensus 187 ~~~l~~--~~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~~~~~~~~~ 262 (337)
++.+.+ .+.-..+++=|-..+ .|. .++++-+++|.++|+++|+++|.||+..+|. .|.+ ..... ....++
T Consensus 167 ~~~~~~~~~~~iaavivEPi~g~-~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~----~a~~~-~gv~PD 240 (339)
T PF00202_consen 167 EELIAALNADEIAAVIVEPIQGE-GGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKF----FASEH-YGVDPD 240 (339)
T ss_dssp HHHHHHHHGGGEEEEEEESSBTT-TTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSS----SGHHH-HTSSSS
T ss_pred HHHHHhhcCCcEEEEEEeccccc-cCccccccchhhehcccccccccceecccccccccccCCc----cceec-ccccCc
Confidence 222221 122234555443333 454 4578889999999999999999999999983 3311 11111 222345
Q ss_pred EEEEecccccccccccccceeEe
Q 047180 263 LGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 263 ~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+++ |+|.++ .|+-+|.+++
T Consensus 241 iv~---~gK~l~-gG~p~sav~~ 259 (339)
T PF00202_consen 241 IVT---FGKGLG-GGLPISAVLG 259 (339)
T ss_dssp EEE---EEGGGG-TTSSEEEEEE
T ss_pred ccc---cccchh-hhhhcccccc
Confidence 655 469999 6899998876
No 345
>PRK07036 hypothetical protein; Provisional
Probab=97.83 E-value=0.0055 Score=60.62 Aligned_cols=164 Identities=15% Similarity=0.174 Sum_probs=92.4
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-C-CCeEEEcCCCCcchHHHH-HhcCce------------eeEeeeccCC--CC
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-P-DSQIYIPVPTWSNHHNIW-RDAHVT------------QRTFHYYHPG--TK 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-p-gd~Vlv~~P~y~~y~~~~-~~~G~~------------~~~~~~~~~~--~~ 179 (337)
+..+++|++|...++.+.... . + ..+|+...-+|.+....+ ...|.. +..+|..... ..
T Consensus 115 v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 194 (466)
T PRK07036 115 VFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPA 194 (466)
T ss_pred EEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCccccccc
Confidence 578999999999988765332 1 2 267888888888864322 222211 2222211100 01
Q ss_pred CCC--------hHHHHHHHHc-CCCC-eEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCc
Q 047180 180 GLD--------FAALMDDIKN-APNG-SFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPE 247 (337)
Q Consensus 180 ~~d--------~~~l~~~l~~-~~~~-~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~ 247 (337)
+.. .+.+++.+.. .+.. ..+++=| -+.-.|. ..+++-+++|.++|++||+++|.||+..+|. .|.
T Consensus 195 ~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EP-v~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~-- 271 (466)
T PRK07036 195 GMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEP-ILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGH-- 271 (466)
T ss_pred CCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeC-CcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCch--
Confidence 111 2334444432 1223 3444433 3333455 5688999999999999999999999998873 221
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
...........++++ .|+|.++ .| +-+|.+++ ++++.+.+
T Consensus 272 --~~~~~~~~gv~PDiv---t~gK~l~-gG~~Pi~av~~---~~~i~~~~ 312 (466)
T PRK07036 272 --FFASEAVFGIQPDII---TFAKGLT-SGYQPLGAVII---SERLLDVI 312 (466)
T ss_pred --hhhhhhhcCCCCCEE---EEccccc-cCccccEEEEE---cHHHHHHH
Confidence 111110111123443 4699998 58 48898875 45554444
No 346
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=97.83 E-value=0.0014 Score=63.97 Aligned_cols=159 Identities=11% Similarity=-0.002 Sum_probs=89.9
Q ss_pred EEeeccchhHHHHHHHHHhhhC-----CC-CeEEEcCCCCcchHHH-HHhcCc-------------eeeEeeeccCCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFH-----PD-SQIYIPVPTWSNHHNI-WRDAHV-------------TQRTFHYYHPGTKG 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~-----pg-d~Vlv~~P~y~~y~~~-~~~~G~-------------~~~~~~~~~~~~~~ 180 (337)
+..+++|++|...++.+...+. ++ .+|+...-+|.+.... +...+. ....+|.... ..
T Consensus 103 v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~--~~ 180 (422)
T PRK05630 103 VFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV--RG 180 (422)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc--cC
Confidence 5788999999998886554331 23 5799999889875422 222221 1122222110 11
Q ss_pred CCh-------HHHHHHHHcCCCCeEEEEeCCC--CCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 181 LDF-------AALMDDIKNAPNGSFFLLHACA--HNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 181 ~d~-------~~l~~~l~~~~~~~~ili~~~p--~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
.+. +.+++.+. .+...+|. -| +.-.|. ..+.+-+++|.++|+++++++|.||+..+|... ...
T Consensus 181 ~~~~~~~~~~~~~~~~~~---~~iAAvi~-EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~Grt---G~~ 253 (422)
T PRK05630 181 SSPQEISEYLRSLELLID---ETVAAIII-EPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRT---GEL 253 (422)
T ss_pred CChHHHHHHHHHHHHHHh---hceEEEEE-echhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcC---chh
Confidence 111 23333332 12333332 34 555676 467889999999999999999999999887310 111
Q ss_pred HHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
.....+ ...++++ +|+|.++ .| .-+|++++ ++++.+.+
T Consensus 254 ~a~~~~-gv~PDi~---t~gK~l~-gG~~p~~av~~---~~~i~~~~ 292 (422)
T PRK05630 254 FATLAA-GVTPDIM---CVGKALT-GGFMSFAATLC---TDKVAQLI 292 (422)
T ss_pred hHHHhc-CCCCCee---eeechhh-cCccccceeec---cHHHHHHH
Confidence 111111 1123444 6799886 47 47888775 45444433
No 347
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=97.81 E-value=0.003 Score=61.20 Aligned_cols=232 Identities=16% Similarity=0.115 Sum_probs=133.6
Q ss_pred cchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEE
Q 047180 70 VLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYI 149 (337)
Q Consensus 70 ~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv 149 (337)
+.+.+.+|+.. .+ -.|..+.....|.+.+++.+ |.. ..+.|..|.++-.++..++.. .|||++.+
T Consensus 55 pS~~m~aAM~~--GD--D~Y~gdpSv~~Lee~vael~-G~E---------~alpthqGRgaE~Il~~~~~~-~~g~e~g~ 119 (467)
T TIGR02617 55 VTQSMQAAMMR--GD--EAYSGSRSYYALAESVKNIF-GYQ---------YTIPTHQGRGAEQIYIPVLIK-KREQEKGL 119 (467)
T ss_pred CCHHHHHHHHc--CC--cccccCchHHHHHHHHHHHh-CCc---------eEEECCCCchHHHHHHHhhcc-cccccccc
Confidence 45556666543 22 24776667778999999965 542 146787788877777665543 25777775
Q ss_pred cCC-------C-CcchHHHHHhcCceeeEeeec--------cCCCCCCChHHHHHHHHcCC-CC-eE--EEEeCCCCCCC
Q 047180 150 PVP-------T-WSNHHNIWRDAHVTQRTFHYY--------HPGTKGLDFAALMDDIKNAP-NG-SF--FLLHACAHNPT 209 (337)
Q Consensus 150 ~~P-------~-y~~y~~~~~~~G~~~~~~~~~--------~~~~~~~d~~~l~~~l~~~~-~~-~~--ili~~~p~NPT 209 (337)
..+ + |..-...+...|+.++.++.. .+.+..+|++++++.+.... .+ .. .=+.||-+ -
T Consensus 120 ~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~--G 197 (467)
T TIGR02617 120 DRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSA--G 197 (467)
T ss_pred cccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecC--C
Confidence 554 1 222235678899988876431 12235789999999997521 11 11 11123222 5
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCC----CCC--CCCccchHHHHHhh----hcCCeEEEEecccccccccccc
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQG----FAS--GDPERDAKAIRIFL----KDGHLLGLAQSYAKNMGLYGQR 279 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~----~~~--~~~~~~~~~~~~~~----~~~~~~i~~~S~SK~~~~~G~R 279 (337)
|.++|.+.++++.++|++||+.++.|-+=.. |.- +.... ..+++.+. +..+ . +..|+||.++.|
T Consensus 198 Gqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~-~~si~eI~rE~~~~aD-s-vt~slsKglgAp--- 271 (467)
T TIGR02617 198 GQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYK-NWSIEQITRETYKYAD-M-LAMSAKKDAMVP--- 271 (467)
T ss_pred CEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhc-CCCHHHHHHHhhccCC-E-EEEEcCCCCCCc---
Confidence 8899999999999999999999999963210 100 00000 11223222 2223 3 345899998764
Q ss_pred cceeEeeeCCH---HHHHHHHHHHHhh-hcccccCCChhHHHHHHHHhCC
Q 047180 280 VGCLSVLCEDE---KQAVAVKSQLQQL-ARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 280 vG~~~~~~~~~---~~~~~~~~~l~~~-~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+|-+++. .++ ++.++++..+-.. --.+|++.+.-.+.+++.-|.+
T Consensus 272 vGg~Lag-~d~~~~~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e 320 (467)
T TIGR02617 272 MGGLLCF-KDDSFFDVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD 320 (467)
T ss_pred ccceEEe-cchhHHHHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhh
Confidence 7776653 455 4444433311111 1134666666666666655553
No 348
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=97.80 E-value=0.0071 Score=59.50 Aligned_cols=163 Identities=13% Similarity=0.076 Sum_probs=92.4
Q ss_pred EEeeccchhHHHHHHHHHhhhC-----C-CCeEEEcCCCCcchHHH-HHhcCc------------eeeEeeecc-CC--C
Q 047180 121 AVQSLSGTGACRLFADFQKRFH-----P-DSQIYIPVPTWSNHHNI-WRDAHV------------TQRTFHYYH-PG--T 178 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~-----p-gd~Vlv~~P~y~~y~~~-~~~~G~------------~~~~~~~~~-~~--~ 178 (337)
+..+++|++|...++.+...+. + ..+|+...-+|.+.... +...|. .+..+|... .. .
T Consensus 112 v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (445)
T PRK09221 112 VFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENA 191 (445)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccc
Confidence 4678999999998886654331 1 25788888888876432 222221 112222110 00 0
Q ss_pred CCC--------ChHHHHHHHHcCC-CCe-EEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCC
Q 047180 179 KGL--------DFAALMDDIKNAP-NGS-FFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDP 246 (337)
Q Consensus 179 ~~~--------d~~~l~~~l~~~~-~~~-~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~ 246 (337)
+.. ..+.+++.+.... .+. .+++=+ -+.-.|. ..+++-+++|.++|+++|+++|.||+..+|. .|.
T Consensus 192 ~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Ep-v~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~- 269 (445)
T PRK09221 192 FSKGQPEHGAELADDLERLVALHDASTIAAVIVEP-MAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGA- 269 (445)
T ss_pred cCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEec-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCch-
Confidence 111 1245666665332 233 344433 3444565 4578889999999999999999999998773 221
Q ss_pred ccchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHH
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~ 296 (337)
......+ ...+++ .+|||.++ .| +-+|.+++ ++++.+.+
T Consensus 270 ---~~~~~~~-gv~PDi---~~~gK~l~-gG~~Pi~av~~---~~~i~~~~ 309 (445)
T PRK09221 270 ---AFAAERF-GVTPDI---ITFAKGLT-NGAIPMGAVIA---SDEIYDAF 309 (445)
T ss_pred ---hhHHHhc-CCCCCE---EEeccccc-cCcccceeeEE---cHHHHHhh
Confidence 1111111 112233 36799997 35 57888764 45555544
No 349
>PRK06149 hypothetical protein; Provisional
Probab=97.76 E-value=0.0027 Score=68.32 Aligned_cols=165 Identities=13% Similarity=0.099 Sum_probs=94.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH-HhcCc-----e--------eeEeeeccCC--CCC-CC-
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW-RDAHV-----T--------QRTFHYYHPG--TKG-LD- 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~-~~~G~-----~--------~~~~~~~~~~--~~~-~d- 182 (337)
++.+++|++|...++++...+.....|+..+=+|.+..... ...+. . +..++..+.. .+. .+
T Consensus 644 v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~ 723 (972)
T PRK06149 644 VFLVNSGSEANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADS 723 (972)
T ss_pred EEEeCCchHHHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCccc
Confidence 57899999999998875544333467888888888654221 11110 0 1222211100 011 11
Q ss_pred ----hHHHHHHHHc---CCCC-eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHH
Q 047180 183 ----FAALMDDIKN---APNG-SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAI 253 (337)
Q Consensus 183 ----~~~l~~~l~~---~~~~-~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~ 253 (337)
.+.+++.++. ...+ ..+++=+-..|--..+.+++-+++|.++|+++|+++|.||+..+|. .|. .....
T Consensus 724 ~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~---~~~a~ 800 (972)
T PRK06149 724 AADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGH---YFWGF 800 (972)
T ss_pred HHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCc---cchhh
Confidence 1333333321 2222 3444444445555567889999999999999999999999998773 111 01111
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
..+ ...++++ +|+|.+| .|+-+|.+++ +.++.+.+
T Consensus 801 e~~-gv~PDiv---t~gK~lg-~G~Pl~av~~---~~~i~~~~ 835 (972)
T PRK06149 801 EQQ-GVVPDII---TMAKGMG-NGHPLGAVIT---RREIAEAL 835 (972)
T ss_pred hhc-CCCCCEE---Eeccccc-CCeeeEEEEE---cHHHHhhh
Confidence 111 1123444 6799999 6899999875 45544443
No 350
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=97.66 E-value=0.0011 Score=60.57 Aligned_cols=110 Identities=8% Similarity=0.061 Sum_probs=79.0
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCC-Ccc-hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeE
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPT-WSN-HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~-y~~-y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
.++...|+.+...++-=+.+ |||.|++..-+ |+. +..+.+..|+++..++. + -+....++.+.++++.+.. ++
T Consensus 71 f~isgsGh~g~E~al~N~le--Pgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~-~-~G~~~~le~i~~~lsqh~p-~~ 145 (385)
T KOG2862|consen 71 FVISGSGHSGWEAALVNLLE--PGDNVLVVSTGTWGQRAADCARRYGAEVDVVEA-D-IGQAVPLEEITEKLSQHKP-KA 145 (385)
T ss_pred EEEecCCcchHHHHHHhhcC--CCCeEEEEEechHHHHHHHHHHhhCceeeEEec-C-cccCccHHHHHHHHHhcCC-ce
Confidence 45666668888877633334 99998887654 443 35678899999988865 2 2567889999999987543 34
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccC
Q 047180 199 FLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAY 238 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y 238 (337)
+++ + ||=|..-...+-++.+-++|++|+.++++|-+-
T Consensus 146 vfv-~--hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~Va 182 (385)
T KOG2862|consen 146 VFV-T--HGDSSTGVLQDLLAISGELCHKHEALLLVDTVA 182 (385)
T ss_pred EEE-E--ecCccccccchHHHHHHHHhhcCCeEEEEechh
Confidence 443 4 666555555666778889999999999999764
No 351
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=97.57 E-value=0.0047 Score=62.73 Aligned_cols=94 Identities=11% Similarity=0.135 Sum_probs=68.4
Q ss_pred eEEEcCCCCcchHHHHHhcCc---eeeEeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEeCCCCCCCCCCCCHHHHH
Q 047180 146 QIYIPVPTWSNHHNIWRDAHV---TQRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLHACAHNPTGVDPSEEQWK 219 (337)
Q Consensus 146 ~Vlv~~P~y~~y~~~~~~~G~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~~~p~NPTG~~~s~~~~~ 219 (337)
+++++.-.-.....++...|. .++.+|+ ++ ++.+|++.|++.+.+. ....+.|+-+-..-.+|++=+.+++.
T Consensus 224 ~vl~s~~aHyS~~KAa~ilGlG~~~vv~Vpv-D~-~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~ 301 (608)
T TIGR03811 224 KWLVPQTKHYSWLKAADIIGIGLDQVIPVPV-DS-NYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIV 301 (608)
T ss_pred EEEECCCccHHHHHHHHHcCCCcccEEEeec-CC-CCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHH
Confidence 466666656666778888888 4889998 33 5899999999888642 22334455466788889986666666
Q ss_pred HHHHHHHhcCc--eeEEcccCCCC
Q 047180 220 EISYQIKAKGH--FPFFDMAYQGF 241 (337)
Q Consensus 220 ~l~~~~~~~~~--~ii~De~Y~~~ 241 (337)
+|++.++++++ ++-+|-+|.++
T Consensus 302 ~l~~~~~~~gl~~~lHVDAAyGG~ 325 (608)
T TIGR03811 302 ALRNKLMKEGIYFYLHVDAAYGGY 325 (608)
T ss_pred HHHHHHHHcCCceeEeeeccccch
Confidence 66655588897 69999999985
No 352
>PRK06148 hypothetical protein; Provisional
Probab=97.57 E-value=0.0053 Score=66.37 Aligned_cols=165 Identities=15% Similarity=0.140 Sum_probs=94.6
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH-HHhcCc------------eeeEeeeccC--CCCCC-C--
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI-WRDAHV------------TQRTFHYYHP--GTKGL-D-- 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~-~~~~G~------------~~~~~~~~~~--~~~~~-d-- 182 (337)
+..+++|++|..+++++........+|+...-+|.+.... +...|. .+..++..+. ..+.. +
T Consensus 683 v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 762 (1013)
T PRK06148 683 AFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAE 762 (1013)
T ss_pred EEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhh
Confidence 5788999999999987655443346888888888876432 221210 0111111000 00111 1
Q ss_pred -----hHHHHHHHH---cCCCC-eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHH
Q 047180 183 -----FAALMDDIK---NAPNG-SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKA 252 (337)
Q Consensus 183 -----~~~l~~~l~---~~~~~-~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~ 252 (337)
.+.+++.+. ..+.. ..+++=+-..+--....+++-+++|.++|+++|+++|.||+..+|. .|. ....
T Consensus 763 ~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~---~~~a 839 (1013)
T PRK06148 763 HGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGS---HWWA 839 (1013)
T ss_pred hHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCC---cchh
Confidence 123444443 22222 3344434444444457789999999999999999999999998883 221 0111
Q ss_pred HHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 253 IRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 253 ~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
...+ ...+.++ +++|.+| .|+-+|.+++ .+++.+.+
T Consensus 840 ~e~~-gv~PDiv---t~gK~lg-gG~Plgav~~---~~ei~~~~ 875 (1013)
T PRK06148 840 FETQ-GVVPDIV---TMGKPIG-NGHPMGAVVT---TREIADSF 875 (1013)
T ss_pred hhhc-CCCccee---eeccccc-CCcceEEEEE---cHHHHhhc
Confidence 1111 1123443 4699999 6999999875 45554443
No 353
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=97.56 E-value=0.023 Score=53.97 Aligned_cols=191 Identities=15% Similarity=0.109 Sum_probs=111.3
Q ss_pred EEeeccchhHHHHHHHHHhhhC----CCC--eEEEcCCCCcchH-HHHHhcCceeeEeeeccC-CCC----CCChHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFH----PDS--QIYIPVPTWSNHH-NIWRDAHVTQRTFHYYHP-GTK----GLDFAALMD 188 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~----pgd--~Vlv~~P~y~~y~-~~~~~~G~~~~~~~~~~~-~~~----~~d~~~l~~ 188 (337)
+...+.|++|...++.+-.++. |-+ .|+-..=+|.+-. .++..++..-...|..+- .+. -=|...+++
T Consensus 119 vff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k 198 (433)
T KOG1401|consen 119 VFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEK 198 (433)
T ss_pred EEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHH
Confidence 4789999999998886544432 112 3777777777653 344444444343333110 010 115788888
Q ss_pred HHHcCCCC-eEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEE
Q 047180 189 DIKNAPNG-SFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLA 266 (337)
Q Consensus 189 ~l~~~~~~-~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (337)
.++.+... ..+++ =.-+---|.. .+++.+..|...|+++++++|.||+..+|..- ...+....+. ..+++
T Consensus 199 ~~~~h~~~IaAVIv-EPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~---g~~~a~e~~~-~~PDI--- 270 (433)
T KOG1401|consen 199 LFESHKGEIAAVIV-EPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRL---GYGWAQEYFG-VTPDI--- 270 (433)
T ss_pred HHHhCCCceEEEEE-ecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCcccc---chHHHHHHhC-cCCcc---
Confidence 88765422 33444 2233334443 67899999999999999999999999887421 1122333332 22333
Q ss_pred ecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 267 QSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 267 ~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.++.|.++ .|+-+|..++ ++++.+.+......+...++++ +.++..++...|+
T Consensus 271 ~t~aK~L~-gGlPigA~~v---~~kV~~~i~~~~~l~hg~Tf~g-npLacsa~~~~l~ 323 (433)
T KOG1401|consen 271 TTVAKPLG-GGLPIGATGV---RDKVAEMISPGDHLYHGGTFSG-NPLACSAGIKVLD 323 (433)
T ss_pred eeehhhcc-CCceeEEEee---hHHHHhhcCCCCccccCcccCC-ChhhhhHHHHHHH
Confidence 35689999 7999999875 4554444432222222334443 5566666665554
No 354
>PRK12566 glycine dehydrogenase; Provisional
Probab=97.51 E-value=0.0018 Score=68.19 Aligned_cols=144 Identities=17% Similarity=0.109 Sum_probs=90.7
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-----CC-CCeEEEcCCCCcc
Q 047180 86 NMEYLP---MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF-----HP-DSQIYIPVPTWSN 156 (337)
Q Consensus 86 ~~~Y~~---~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~-----~p-gd~Vlv~~P~y~~ 156 (337)
.+-|.| ++|+-++...+.+++..-.+- +.+ .++-++|..+-...+.++... .+ .++|+++.=..+.
T Consensus 529 ~hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~-Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgt 603 (954)
T PRK12566 529 LHPFAPREQAEGYRAMIDELEAWLCAITGF----DAI-CMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGT 603 (954)
T ss_pred CCCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeE-eecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEeccccccc
Confidence 367877 678766666665555322111 111 344555555543333333321 02 3678888755533
Q ss_pred hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 157 HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 157 y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
-...+...|.+++.+++. + +..+|+++|++.+.+...+.+.|.+.+| .|+-++ ++.+++|+++|+++|.+++.|-
T Consensus 604 Npasa~~~GieVv~Vp~D-~-~G~iDle~L~a~I~~~~~~laaVmiT~P--nt~Gv~-e~~V~eI~~iah~~Galv~vDg 678 (954)
T PRK12566 604 NPASAQMAGMRVVIVECD-P-DGNVDLDDLKAKAAAAGDRLSCLMITYP--STHGVY-EEGIREICEVVHQHGGQVYMDG 678 (954)
T ss_pred CHHHHHHCCCEEEEeccC-C-CCCcCHHHHHHHhhccCCCEEEEEEEec--CcCcee-cchHHHHHHHHHHcCCEEEEEe
Confidence 344577889999999984 3 4689999999998744444455554544 344445 5779999999999999999998
Q ss_pred cCC
Q 047180 237 AYQ 239 (337)
Q Consensus 237 ~Y~ 239 (337)
+..
T Consensus 679 A~~ 681 (954)
T PRK12566 679 ANL 681 (954)
T ss_pred eCh
Confidence 763
No 355
>PRK08297 L-lysine aminotransferase; Provisional
Probab=97.49 E-value=0.0084 Score=58.95 Aligned_cols=122 Identities=9% Similarity=0.070 Sum_probs=73.3
Q ss_pred EEeeccchhHHHHHHHHHhhh--------C---C-CCeEEEcCCCCcchHHH-HHhcCceee-----------Ee--eec
Q 047180 121 AVQSLSGTGACRLFADFQKRF--------H---P-DSQIYIPVPTWSNHHNI-WRDAHVTQR-----------TF--HYY 174 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~--------~---p-gd~Vlv~~P~y~~y~~~-~~~~G~~~~-----------~~--~~~ 174 (337)
+..+++|++|...++.+...+ . + ..+|+...-+|.+.... +...|.... .+ |..
T Consensus 113 v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK08297 113 LFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKL 192 (443)
T ss_pred EEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCC
Confidence 578999999999998765432 1 1 25799999888886533 333332110 01 100
Q ss_pred c-C-CCCC---C------ChHHHHHHHHcCCCCe-EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 175 H-P-GTKG---L------DFAALMDDIKNAPNGS-FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 175 ~-~-~~~~---~------d~~~l~~~l~~~~~~~-~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
. + .... . +++.+++.+...+... .+++=|-..+---.+.+++.+++|.++|++||+++|.||++.+|.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfG 272 (443)
T PRK08297 193 RFPLPGEDLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVG 272 (443)
T ss_pred CCCCcccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccC
Confidence 0 0 0000 0 2344555565433333 344433333322245889999999999999999999999999883
No 356
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=97.43 E-value=0.0022 Score=61.35 Aligned_cols=172 Identities=9% Similarity=-0.000 Sum_probs=94.2
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch--HHHHHhcCceeeEeeeccCCCCCCChHHHHH-HHHcCCCCe
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH--HNIWRDAHVTQRTFHYYHPGTKGLDFAALMD-DIKNAPNGS 197 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y--~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~~ 197 (337)
++.+.+|++++..++.-+.. +||++++..=+..+. ..+++..|.. ..+...... ...+..++++ .+.+ +.+
T Consensus 70 ~~~~gsgt~~~Ea~~~nl~~--~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~-g~~~~~~~~~~~l~~--~~~ 143 (360)
T PRK05355 70 LFLQGGASLQFAMVPMNLLG--GGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDD-GFTYIPPLDEWQLSD--DAA 143 (360)
T ss_pred EEEcCCchHHHHHHHHhcCC--CCCeEEEEECCHHHHHHHHHHHHhCCc-eEEeccccc-CCCCCCChhhccCCC--CCC
Confidence 34456668889988755444 788888776555553 3567778854 444332111 2233344444 4542 233
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc
Q 047180 198 FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG 277 (337)
Q Consensus 198 ~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 277 (337)
.+.+ +...|.||...+ .+++| ++.++|+|-+-. +...+++ ..+. . +++.|-=|.||.+|
T Consensus 144 ~V~~-th~eTstGv~~~--~i~~i------~g~l~vVDavss-~g~~~id--------v~~~--d-~~~~ssqK~lgP~G 202 (360)
T PRK05355 144 YVHY-TSNETIDGTEFH--ELPDT------GDVPLVADMSSD-ILSRPID--------VSKF--G-LIYAGAQKNIGPAG 202 (360)
T ss_pred EEEE-ccCCCcceEecC--ccccc------CCCcEEEEcCcc-ccCccCC--------HHHc--c-EEEEeccccccCCc
Confidence 4444 666889999874 24444 899999997643 2211111 1122 2 66667779999877
Q ss_pred cccceeEeeeCCHHHHHHHHHHHH--------hhhcccccCCChhHHHHHHHHhC
Q 047180 278 QRVGCLSVLCEDEKQAVAVKSQLQ--------QLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 278 ~RvG~~~~~~~~~~~~~~~~~~l~--------~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+|++++ +++.++++...+. .........|+..+-.+...+|+
T Consensus 203 --lg~l~~---s~~~l~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~ 252 (360)
T PRK05355 203 --LTIVIV---REDLLGRALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFK 252 (360)
T ss_pred --eEEEEE---CHHHHhhcccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHH
Confidence 577765 4554444322000 00112334566666555555554
No 357
>PRK05367 glycine dehydrogenase; Provisional
Probab=97.37 E-value=0.0073 Score=64.55 Aligned_cols=148 Identities=11% Similarity=0.109 Sum_probs=92.6
Q ss_pred EeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCC-----CC----HHHHHHHHHHHhCCCCcccccCceeEEeec
Q 047180 55 NVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMG-----GS----VKMVEETLKLAYGDNSEFIKDKRIAAVQSL 125 (337)
Q Consensus 55 ~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~-----G~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 125 (337)
-++.|.|. ...|+.+.+-+.+ ++.+...|+|.+ |. -+|++.+++.. |-+ ..+ +....
T Consensus 80 ~ig~G~y~-----~~~P~vi~~~i~~-~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt-G~~-----~an--aSl~d 145 (954)
T PRK05367 80 YIGQGYYG-----THTPPVILRNILE-NPAWYTAYTPYQPEISQGRLEALLNFQTMVADLT-GLE-----IAN--ASLLD 145 (954)
T ss_pred ccCCCCCC-----CcCcHHHHHHHHh-CcchhhccCCCChHHHHHHHHHHHHHHHHHHHHH-CCC-----hhh--ccccc
Confidence 35677663 3566666553322 344456777743 43 23555566553 322 223 24566
Q ss_pred cchhHHHHHHHHHhhhCC--CCeEEEcCCCCcchHHHH----HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 126 SGTGACRLFADFQKRFHP--DSQIYIPVPTWSNHHNIW----RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~p--gd~Vlv~~P~y~~y~~~~----~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
+++.+...++..+. +.+ +|+|++++-.||.....+ +..|.+++.++.. . |.+ . .+...
T Consensus 146 ~aTAa~ea~~~a~~-~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~-~-----d~~-------~--~~~~~ 209 (954)
T PRK05367 146 EATAAAEAMALAKR-VSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAA-K-----ALD-------H--DDVFG 209 (954)
T ss_pred cHHHHHHHHHHhhh-hccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCc-c-----CCC-------c--ccEEE
Confidence 77777776665543 334 489999999999987654 5689999988752 1 111 1 12333
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
++..+| |-+|.+.+ +++|++.|+++|.++++|-
T Consensus 210 vlvq~p-~~~G~i~d---~~~i~~~ah~~Gal~~vda 242 (954)
T PRK05367 210 VLLQYP-GTSGEVRD---YTALIAAAHARGALVAVAA 242 (954)
T ss_pred EEEecC-CCCeeecc---HHHHHHHHHHcCCEEEEEe
Confidence 333444 78999974 8899999999999999985
No 358
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=97.33 E-value=0.028 Score=59.17 Aligned_cols=79 Identities=16% Similarity=0.129 Sum_probs=54.6
Q ss_pred CCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHHHhhhcCCeEEEEecccccccccc-cccce
Q 047180 206 HNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGC 282 (337)
Q Consensus 206 ~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~ 282 (337)
+.=.|.+ ++++-+++|.++|+++|+++|.||+..+|. .|. ......+ ...+++++ ++|.++ .| +-+|.
T Consensus 595 qGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~----~fa~e~~-gv~PDIi~---~gKgLt-gG~~Plaa 665 (817)
T PLN02974 595 HGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGV----ESAWELL-GCKPDIAC---YAKLLT-GGLVPLAA 665 (817)
T ss_pred cCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccc----hhhHHhc-CCCCCEEe---eccccc-CCCCccEE
Confidence 5666776 478999999999999999999999999983 221 1111111 12244544 689998 68 58998
Q ss_pred eEeeeCCHHHHHHH
Q 047180 283 LSVLCEDEKQAVAV 296 (337)
Q Consensus 283 ~~~~~~~~~~~~~~ 296 (337)
+++ ++++.+.+
T Consensus 666 ~l~---~~~I~~~f 676 (817)
T PLN02974 666 TLA---TEEVFEAF 676 (817)
T ss_pred EEE---cHHHHHhh
Confidence 875 45555554
No 359
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.31 E-value=0.0067 Score=55.31 Aligned_cols=146 Identities=18% Similarity=0.137 Sum_probs=95.1
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEc--CCCCcchHH----------HHHhcCceeeEeeeccCCCCCCChHHHHHH
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIP--VPTWSNHHN----------IWRDAHVTQRTFHYYHPGTKGLDFAALMDD 189 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~--~P~y~~y~~----------~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~ 189 (337)
.+...|+.|+..++.-+.+ |||+.+.. .|+- .... .++..|.....+|+.. +..+|.+.++..
T Consensus 87 pq~isGTHAI~~aLfg~LR--pgDell~i~G~PYD-TLeevIG~rg~~~gSL~dfgi~Y~~v~Lt~--~gkiD~~~v~~~ 161 (416)
T COG4100 87 PQIISGTHAIACALFGILR--PGDELLYITGSPYD-TLEEVIGLRGEGQGSLKDFGIKYKAVPLTA--DGKIDIQAVKTA 161 (416)
T ss_pred eeeecchhHHHHHHHhccC--CCCeEEEecCCcch-hHHHHhccCCCCcccHHHhCcceeeccccc--CCcccHHHHHHh
Confidence 3566789999888765555 99987643 3432 2222 3456677777788743 467999999998
Q ss_pred HHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh--cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEe
Q 047180 190 IKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKA--KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQ 267 (337)
Q Consensus 190 l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~--~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (337)
++. ..+++.+.-|..---=--++-+++++++++.++ .++++++|.+|.+|+.. . + |.. . + -=++.+
T Consensus 162 i~~--~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~-~-E---Pt~-v---G-aDliAG 229 (416)
T COG4100 162 ISD--RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEE-K-E---PTH-V---G-ADLIAG 229 (416)
T ss_pred cCc--cceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhc-c-C---ccc-c---c-hhhhcc
Confidence 873 456677654432222233678899999999988 57999999999999742 1 1 110 0 1 124557
Q ss_pred ccccccccccc--ccceeEe
Q 047180 268 SYAKNMGLYGQ--RVGCLSV 285 (337)
Q Consensus 268 S~SK~~~~~G~--RvG~~~~ 285 (337)
|+=|+-| .|+ --||+++
T Consensus 230 SLIKNpG-GgiaktGGYiaG 248 (416)
T COG4100 230 SLIKNPG-GGIAKTGGYIAG 248 (416)
T ss_pred ceeeCCC-Cceeeccceeec
Confidence 8888876 454 2366654
No 360
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=97.22 E-value=0.0037 Score=60.14 Aligned_cols=160 Identities=13% Similarity=0.013 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeec-cchhHHHHHHHHHhhhCC-CCeEEEcCCCCcch-HH-HHHhcCc-eee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSL-SGTGACRLFADFQKRFHP-DSQIYIPVPTWSNH-HN-IWRDAHV-TQR 169 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~-g~~~al~~~~~~l~~~~p-gd~Vlv~~P~y~~y-~~-~~~~~G~-~~~ 169 (337)
+.+.|+.+++++ +.. ++++ ++++. +|+++++.++.-+.. + ++.|++ +=.|+.- .. +.+..|. +++
T Consensus 50 ~~~~r~~l~~l~-~~~----~~~~--v~~~~gs~T~~~~~~~~~l~~--~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~ 119 (378)
T PRK03080 50 LKRVIEGTRELL-SLP----EGYE--VGIVPGSDTGAWEMALWSLLG--ARRVDHLA-WESFGSKWATDVVKQLKLEDPR 119 (378)
T ss_pred HHHHHHHHHHHh-CCC----CCce--EEEECCchHHHHHHHHHhcCC--CCcceEEE-eCHHHHHHHHHHHhhcCCCCce
Confidence 345666677665 321 1223 45554 789999998866532 3 344444 2233331 12 2356788 877
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++.. .+..+|+++++ . .+.+.+ +..+|.||...+.+ +|++ +++|+++|+|-+- .+..-+++
T Consensus 120 ~~~~~--~g~~~d~~~i~----~---~~~V~~-~h~~t~tG~~~pi~---~I~~--~~~g~~~vVDa~q-s~G~~pid-- 181 (378)
T PRK03080 120 VLEAD--YGSLPDLSAVD----F---DRDVVF-TWNGTTTGVRVPVA---RWIG--ADREGLTICDATS-AAFALPLD-- 181 (378)
T ss_pred EeccC--CCCCCCHhhcC----C---CCCEEE-EecCCccceeccch---hhcc--ccCCCeEEEeccc-ccccCCCC--
Confidence 77652 23456666532 1 223333 66689999999854 4555 6789999999753 33221121
Q ss_pred hHHHHHhhhcCCeEEEEecccccccc-cccccceeEeeeCCHHHHHHH
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGL-YGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+. + -. +++.|.-|.++. +| +|++++ +++.++++
T Consensus 182 ---v~---~--iD-~~~~s~~K~l~~P~G--~g~l~v---~~~~~~~~ 215 (378)
T PRK03080 182 ---WS---K--LD-VYTFSWQKVLGGEGG--HGMAIL---SPRAVERL 215 (378)
T ss_pred ---HH---H--Cc-EEEEehhhhCCCCCc--eEEEEE---CHHHHHhh
Confidence 11 1 12 555666799863 55 688776 45555544
No 361
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=97.19 E-value=0.0055 Score=58.50 Aligned_cols=140 Identities=15% Similarity=0.147 Sum_probs=98.1
Q ss_pred CCCCCCCC---CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhC--C----CCeEEEcCCCCc
Q 047180 85 ANMEYLPM---GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFH--P----DSQIYIPVPTWS 155 (337)
Q Consensus 85 ~~~~Y~~~---~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~--p----gd~Vlv~~P~y~ 155 (337)
..|-|.|. +|+.++...+.+|+....+ . +.| .++-+.|.++=+.-+.++.... . .++|+||+-.-.
T Consensus 94 ~iHP~~pe~~vqG~l~li~~Lq~~L~~ITG--~--Dav-sLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHG 168 (496)
T COG1003 94 NIHPFQPEEQVQGYLELIYELQEWLKEITG--M--DAV-SLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHG 168 (496)
T ss_pred hcCCCCChHHHHHHHHHHHHHHHHHHHhcC--C--cee-eccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccC
Confidence 45667663 6777788888888855432 2 223 3566666555444444433221 2 379999998888
Q ss_pred chHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 156 NHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 156 ~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
.--..+.++|.++|.+++.+ +..+|+++|++++.+ +...+.+. ||.-.-+=++.+++|+++..++|-.|-.|
T Consensus 169 TNPASAam~G~~VV~V~~~~--~G~VDlddLk~k~~~---~~AalMiT---nPsT~GvFE~~I~ei~~ivH~~Gg~vY~D 240 (496)
T COG1003 169 TNPASAAMAGFKVVVVKCDE--NGNVDLDDLRAKAED---NLAALMIT---NPSTLGVFEEDIREICEIVHEAGGQVYYD 240 (496)
T ss_pred CChhhHhhcCceEEEEecCC--CCCccHHHHHHHhcc---ceeEEEec---cCcccccchhhHHHHHHHHHHcCCEEEec
Confidence 87888899999999999843 467899999998863 33444444 44555556788999999999999999999
Q ss_pred cc
Q 047180 236 MA 237 (337)
Q Consensus 236 e~ 237 (337)
-+
T Consensus 241 GA 242 (496)
T COG1003 241 GA 242 (496)
T ss_pred Cc
Confidence 65
No 362
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=97.07 E-value=0.056 Score=52.98 Aligned_cols=121 Identities=9% Similarity=0.068 Sum_probs=73.3
Q ss_pred EEeeccchhHHHHHHHHHhhhC---------C---CCeEEEcCCCCcchHH-HHHhcCce-ee------------Eeeec
Q 047180 121 AVQSLSGTGACRLFADFQKRFH---------P---DSQIYIPVPTWSNHHN-IWRDAHVT-QR------------TFHYY 174 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~---------p---gd~Vlv~~P~y~~y~~-~~~~~G~~-~~------------~~~~~ 174 (337)
+..+++|++|...++.+...+. + +.+|+...=+|.+... .+...|.. .. +.|..
T Consensus 106 v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~ 185 (431)
T TIGR03251 106 LFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKL 185 (431)
T ss_pred EEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcc
Confidence 5789999999999887654321 1 3679999988888653 23333321 00 01100
Q ss_pred ----cCCCCC-------CChHHHHHHHHcCCCCe-EEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 175 ----HPGTKG-------LDFAALMDDIKNAPNGS-FFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 175 ----~~~~~~-------~d~~~l~~~l~~~~~~~-~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
...... -+++.+++.+...+... .+++=+ -+.-.|.+ .+++.+++|.++|++||+++|.||++.+|
T Consensus 186 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEP-v~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~ 264 (431)
T TIGR03251 186 TFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEP-IQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGV 264 (431)
T ss_pred cCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEec-cccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcc
Confidence 000000 02344445554333333 444433 34445654 78999999999999999999999999987
Q ss_pred C
Q 047180 242 A 242 (337)
Q Consensus 242 ~ 242 (337)
.
T Consensus 265 G 265 (431)
T TIGR03251 265 G 265 (431)
T ss_pred C
Confidence 4
No 363
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=96.92 E-value=0.014 Score=56.09 Aligned_cols=194 Identities=16% Similarity=0.172 Sum_probs=115.0
Q ss_pred CCCCchhhHHHHHhc-CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCC-C
Q 047180 33 AAKDPILGVTEAFLA-DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGD-N 110 (337)
Q Consensus 33 ~~~~~~~~~~~~~~~-~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~-~ 110 (337)
.+.+.+.++++.... +.. ...++..|... .+.+.....+.++....+.-..--| .+..++-.++.+++..- +
T Consensus 61 l~~d~v~~~i~~~~~ld~~-~~~~~vS~~v~--~~~~~~~~l~~~~~~k~N~l~~d~f---p~~~~~e~~~Vnm~~~L~~ 134 (491)
T KOG1383|consen 61 LPKDAVLELINDELMLDGN-PRLGLASGVVY--WGEPELDKLIMEAYNKFNPLHPDEF---PVVRKLEAECVNMIANLFN 134 (491)
T ss_pred CCHHHHHHHHHHHhccCCC-cccCeeeEEEe--cCCcchhhHHHHHHhhcCccCcccc---chhHHHHHHHHHHHHHHhc
Confidence 344556666544432 332 33444555432 1222222333444443311111123 24555555655554221 1
Q ss_pred CcccccCceeEEeeccchhHHHHHHHHHhhhC-C--C---CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChH
Q 047180 111 SEFIKDKRIAAVQSLSGTGACRLFADFQKRFH-P--D---SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFA 184 (337)
Q Consensus 111 ~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~-p--g---d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~ 184 (337)
.+ ++. -...|.|+++++.++........ . | ..++++.-.-..+....+..+.++..+|+ ++.++.+|+.
T Consensus 135 ~~---~~~-~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~-~~~~~~~D~~ 209 (491)
T KOG1383|consen 135 AP---SDS-CGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPL-DEGDYRVDPG 209 (491)
T ss_pred CC---ccc-cCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEEEeeec-cccceEecHH
Confidence 11 122 24678999999555543222110 1 2 34455544445566777888899999998 4468999999
Q ss_pred HHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh-cCceeEEcccCCCCCC
Q 047180 185 ALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKA-KGHFPFFDMAYQGFAS 243 (337)
Q Consensus 185 ~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~-~~~~ii~De~Y~~~~~ 243 (337)
++.+.+. +++++++-.-|+-|+|.. +..++|++++.+ .++-+-.|-+-++|.-
T Consensus 210 k~~~~i~---eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~ 263 (491)
T KOG1383|consen 210 KVVRMID---ENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFIN 263 (491)
T ss_pred HHHHHhc---cceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCccccc
Confidence 9998876 345666667799999986 788899999998 9999999999888863
No 364
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=96.81 E-value=0.032 Score=50.89 Aligned_cols=99 Identities=18% Similarity=0.117 Sum_probs=61.3
Q ss_pred CChHHHHHHHHcC-CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc
Q 047180 181 LDFAALMDDIKNA-PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD 259 (337)
Q Consensus 181 ~d~~~l~~~l~~~-~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 259 (337)
.|...+++++..+ ..+..+++.-.--.=.|-+.+ +++|.+++++++.+++.||++..+.+|.. ..-.-..+--.
T Consensus 177 ~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~t--GrGt~E~~~vm 251 (417)
T KOG1359|consen 177 VDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGET--GRGTAEEFGVM 251 (417)
T ss_pred chhHHHHHHHHHhhhheEEEEEecceeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCC--CCChHHHhCCC
Confidence 4555666555432 223345554433344566655 56788889999999999999987766421 11111222223
Q ss_pred CCeEEEEecccccccccccccceeEee
Q 047180 260 GHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 260 ~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
++-.++.++++|..| |---||..+|
T Consensus 252 ~~vdiinsTLgKAlG--ga~GGyttgp 276 (417)
T KOG1359|consen 252 GDVDIINSTLGKALG--GASGGYTTGP 276 (417)
T ss_pred Ccceehhhhhhhhhc--CCCCCCccCC
Confidence 445666789999997 6667998764
No 365
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=96.75 E-value=0.013 Score=55.74 Aligned_cols=165 Identities=15% Similarity=0.085 Sum_probs=92.3
Q ss_pred EEeeccchhH-HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccC-CCCCCChHHHHHHHHcCCCCeE
Q 047180 121 AVQSLSGTGA-CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHP-GTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 121 ~~~t~g~~~a-l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
.++++.++|. +.+.+..+.....++.|+.+.=.--.-.-+++.+|.+++.+|...+ +.-..|.+.+++.+++.....+
T Consensus 77 ~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~i 156 (389)
T PF05889_consen 77 CFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGADNI 156 (389)
T ss_dssp EEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGE
T ss_pred eEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCe
Confidence 4677777765 5555566653334677777653322333456678999888885322 2233467888887765433334
Q ss_pred EEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHh---hhcCCeEEEEeccccccc
Q 047180 199 FLLHACAHNPTGVDPSE-EQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIF---LKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~-~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~S~SK~~~ 274 (337)
+.++..+ ++..... +++++|+++|+++|+..|..-||.--. ..-...+ ...+.-=+++.|.-|+|=
T Consensus 157 Lcvlttt---scfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~-------~~~~~~i~~a~~~GRvda~vqS~dkNF~ 226 (389)
T PF05889_consen 157 LCVLTTT---SCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQS-------SKCMHLIQQAWRVGRVDAFVQSTDKNFM 226 (389)
T ss_dssp EEEEEES---STTTTB----HHHHHHHHHHHT--EEEEGTTTTT--------HHHHHHHHHHHHHSTCSEEEEEHHHHHC
T ss_pred EEEEEec---CccCCCCCccHHHHHHHHHHcCCceEEccchhhhH-------HHHHHHHHHHHhcCCcceeeeecCCCEE
Confidence 3333322 3333333 359999999999999999999996321 1111111 112322357799999997
Q ss_pred ccccccceeEeeeCCHHHHHHHHH
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
.| +|-.++.+.++..++.+.+
T Consensus 227 VP---vGgai~As~~~~~i~~vs~ 247 (389)
T PF05889_consen 227 VP---VGGAIMASFDPSGILAVSK 247 (389)
T ss_dssp EE---SSHEEEEESSHHHHHHHHH
T ss_pred ec---CCCcEEEecCHHHHHHHHH
Confidence 54 5666666678877766543
No 366
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=96.62 E-value=0.0032 Score=59.32 Aligned_cols=159 Identities=14% Similarity=0.126 Sum_probs=37.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCc------chHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWS------NHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP 194 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~------~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 194 (337)
.++++....|+.+++..+. +|.+|++..=--. -...+++..|++++++=.. ..-.++++++++.+
T Consensus 65 A~VvNnnaAAv~L~l~~la---~~~EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI~e-- 135 (367)
T PF03841_consen 65 ALVVNNNAAAVLLALNTLA---KGKEVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAITE-- 135 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccccccccc---cccccccccccccccccccccccccccccccccccccc----cccccccccccccc--
Confidence 4677777888888877665 4777776532211 1345778899999988542 23346677788863
Q ss_pred CCeEEEEeCCCCCC--CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC----CCCCccchHHHHHhhhcCCeEEEEec
Q 047180 195 NGSFFLLHACAHNP--TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA----SGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 195 ~~~~ili~~~p~NP--TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
++.+++-..++|- .|..=+ -.++++++++++|++.++.|-.-.-+. ++ . .+.+.+..+...+-+ +++.|
T Consensus 136 -~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~g-l-~~Ep~v~~~~~~GaD-lV~fS 210 (367)
T PF03841_consen 136 -NTAALLKVHTSNFRIQGFTGE-VSLEELAELAKEHGLPVIVDLGSGLLVDLSPYG-L-PDEPTVQEYLAAGAD-LVTFS 210 (367)
T ss_dssp ---------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT------------CCCCT-S-EEEEE
T ss_pred -ccccccccccccccccccccc-ccHHHHHHHHhhcCCcEEEECCCCCCcCccccc-C-ccccHHHHHhhcCCC-EEEEE
Confidence 2333333445565 343322 257889999999999999997542221 11 0 011122323333433 44456
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
=-|.+| |-..|.+++ ..+++++++.
T Consensus 211 GdKlLG--GPQaGiI~G---kk~lI~~lk~ 235 (367)
T PF03841_consen 211 GDKLLG--GPQAGIIVG---KKELIEKLKK 235 (367)
T ss_dssp TTSSSS--S-S-EEEEE---EHHHHHHHHH
T ss_pred CCCcCC--CCCeEEEEe---CHHHHHHHhh
Confidence 689998 667899885 5777777764
No 367
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=96.57 E-value=0.043 Score=58.79 Aligned_cols=146 Identities=14% Similarity=0.097 Sum_probs=88.5
Q ss_pred eeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCC-----C----CHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 56 VGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMG-----G----SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 56 l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~-----G----~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
++.|.|. ...++.+.+++..- ......|+|.+ | +.+++..++++. |- +.++ +-.+.+
T Consensus 108 iG~G~y~-----~~~P~~v~~~i~~~-~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt-G~-----~~an--aSL~d~ 173 (993)
T PLN02414 108 IGMGYYN-----THVPPVILRNILEN-PGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT-GL-----PMSN--ASLLDE 173 (993)
T ss_pred cCCCCCC-----ccCCHHHHHHHHhC-hHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh-CC-----Chhh--EeecCC
Confidence 4555542 34666675655442 23334555543 4 345666777764 32 2334 356788
Q ss_pred chhHHHHHHHHHhhhCCC--CeEEEcCCCCcchHHHHH----hcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEE
Q 047180 127 GTGACRLFADFQKRFHPD--SQIYIPVPTWSNHHNIWR----DAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFL 200 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pg--d~Vlv~~P~y~~y~~~~~----~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~il 200 (337)
++.+...++..+. +.+| |+|++++-.||.+...++ ..|.+++.+++.+ .+ ... .....++
T Consensus 174 aTAaaea~~~a~~-~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~-----~~------~~~--~~v~~vl 239 (993)
T PLN02414 174 GTAAAEAMAMCNN-ILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKD-----FD------YSS--GDVCGVL 239 (993)
T ss_pred hHHHHHHHHHHHh-cccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchh-----hc------ccc--CceEEEE
Confidence 8888777665543 2334 789999999999876664 4688888887621 11 011 1112333
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 201 LHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
+ -+| |-+|.+.+ +++|++.|+++|+++++
T Consensus 240 v-q~P-~~~G~v~d---v~~I~~~ah~~GaL~iV 268 (993)
T PLN02414 240 V-QYP-ATDGEVLD---YAEFVKNAHANGVKVVM 268 (993)
T ss_pred E-ecC-CCCeEEcC---HHHHHHHHHHcCCEEEE
Confidence 3 122 34999964 78899999999999998
No 368
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=96.50 E-value=0.24 Score=47.15 Aligned_cols=106 Identities=17% Similarity=0.151 Sum_probs=65.6
Q ss_pred ChHHHHHHHHcCCC-CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcC
Q 047180 182 DFAALMDDIKNAPN-GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDG 260 (337)
Q Consensus 182 d~~~l~~~l~~~~~-~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 260 (337)
|+++|++.|+..++ .++++-.-+=|.=+|.+-+ +++|++++.++|.+-+.||++.-=.+|+- .. .+..-...-
T Consensus 288 D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---leelcDvah~yGAiTFlDEVHAVGlYG~r--Ga-GvgerdGvm 361 (570)
T KOG1360|consen 288 DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEELCDVAHKYGAITFLDEVHAVGLYGPR--GA-GVGERDGVM 361 (570)
T ss_pred CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC---HHHHHHHHHHhCceeeeehhhhhccccCC--CC-CccccCCcc
Confidence 78888888876432 2344444567899999988 55688999999999999998752112210 00 000000000
Q ss_pred Ce-EEEEecccccccccccccceeEeeeCCHHHHHHHHHH
Q 047180 261 HL-LGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQ 299 (337)
Q Consensus 261 ~~-~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~ 299 (337)
++ =|+.+++.|+||.-| ||+.. ...+++-+++.
T Consensus 362 ~kvDiIsGTLgKafGcVG---GYIAa---t~~LvDmiRSy 395 (570)
T KOG1360|consen 362 HKVDIISGTLGKAFGCVG---GYIAA---TRKLVDMIRSY 395 (570)
T ss_pred hhhhhcccchhhhccccc---ceehh---hhhHHHHHHHh
Confidence 11 256689999999744 77753 55666666653
No 369
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=96.43 E-value=0.049 Score=51.06 Aligned_cols=141 Identities=13% Similarity=0.079 Sum_probs=98.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh---CCCCeEEEcCCCCcch-HHHHH
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF---HPDSQIYIPVPTWSNH-HNIWR 162 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~---~pgd~Vlv~~P~y~~y-~~~~~ 162 (337)
-.|.-+.++-.|.+++.+.+ |-. . ++.|.-|-+|-.++...+... -||.+..+++=+|..- ....+
T Consensus 73 EAYagsrs~~~L~~avkdif-Gfq-------~--~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~ 142 (471)
T COG3033 73 EAYAGSRSYYALADAVKDIF-GFQ-------Y--TIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQ 142 (471)
T ss_pred hhhcccccHHHHHHHHHHhc-Cce-------e--eeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHH
Confidence 35888889999999998864 531 1 345777777766666544431 1666666666555543 45667
Q ss_pred hcCceeeEeeeccCC--------CCCCChHHHHHHHHcCCC--CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCcee
Q 047180 163 DAHVTQRTFHYYHPG--------TKGLDFAALMDDIKNAPN--GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFP 232 (337)
Q Consensus 163 ~~G~~~~~~~~~~~~--------~~~~d~~~l~~~l~~~~~--~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~i 232 (337)
..|+.++.++..... ...+|+++|+..+.+... -+.|++.-..|--.|.-.|.+.+++..++|+++++.+
T Consensus 143 ~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipv 222 (471)
T COG3033 143 INGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPV 222 (471)
T ss_pred hcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcE
Confidence 899988888763221 235789999998876422 2344444445777899999999999999999999999
Q ss_pred EEccc
Q 047180 233 FFDMA 237 (337)
Q Consensus 233 i~De~ 237 (337)
+.|-+
T Consensus 223 v~Da~ 227 (471)
T COG3033 223 VMDAA 227 (471)
T ss_pred Eeehh
Confidence 99964
No 370
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=96.39 E-value=0.15 Score=49.02 Aligned_cols=143 Identities=13% Similarity=0.092 Sum_probs=86.6
Q ss_pred EEeeccchhHHHHHHHHHh-hhCCCCeEEEcCCCCcch-H-HHHHhcCc-eeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 121 AVQSLSGTGACRLFADFQK-RFHPDSQIYIPVPTWSNH-H-NIWRDAHV-TQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~-~~~pgd~Vlv~~P~y~~y-~-~~~~~~G~-~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
++++.+|++++..++.-+. . +||.|++.. .|+.- . .+++..|. ++..+.. +-+..+|+++++. ..
T Consensus 61 ~~l~GsGT~a~Eaa~~nl~~~--~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~------~~ 129 (374)
T TIGR01365 61 GIVPASDTGAVEMALWSMLGC--RGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF------KN 129 (374)
T ss_pred EEECCchHHHHHHHHHHcCCC--CCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC------CC
Confidence 4667888999998875443 4 788999877 66664 4 67888998 4565543 2245678887762 12
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
.+++ +..--.||...+.+ +++..+ ++.++|+|-+-. +...+++ +.. -. +++.|--|+++.|
T Consensus 130 ~v~~--vhnETSTGv~npv~---~i~~~~--~~~lliVDavSs-~g~~~l~--------~d~--iD-v~~tgsQK~L~~p 190 (374)
T TIGR01365 130 DVVF--TWNGTTSGVRVPNG---DFIPAD--REGLTICDATSA-AFAQDLD--------YHK--LD-VVTFSWQKVLGGE 190 (374)
T ss_pred CEEE--ecCCCchheecccc---cccccc--CCCcEEEEccch-hcCCCCC--------hhH--Cc-EEEEechhccCCC
Confidence 2333 43356788888753 333211 588999997643 3211111 111 22 4456779999877
Q ss_pred ccccceeEeeeCCHHHHHHHH
Q 047180 277 GQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~ 297 (337)
+- +|++++ +++.+++..
T Consensus 191 pG-ls~v~v---s~~Al~~~~ 207 (374)
T TIGR01365 191 GA-HGMLIL---SPRAVARLE 207 (374)
T ss_pred Cc-eEEEEE---CHHHHHHHh
Confidence 63 666665 565555543
No 371
>PLN02452 phosphoserine transaminase
Probab=96.10 E-value=0.42 Score=45.81 Aligned_cols=142 Identities=13% Similarity=0.032 Sum_probs=78.3
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc--hHHHHHhcCceeeEeeeccCCC--CCCChHHHHHHHHcCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSN--HHNIWRDAHVTQRTFHYYHPGT--KGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~--y~~~~~~~G~~~~~~~~~~~~~--~~~d~~~l~~~l~~~~~~ 196 (337)
++...||+.++..+..-|.. +||++++..=+... +...++..|...+-... ...+ ..++++++ ...+..
T Consensus 74 ~~l~Gsgt~~~ea~~~nl~~--~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~ 146 (365)
T PLN02452 74 LFLQGGASTQFAAIPLNLCK--PGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEW----ELTPDA 146 (365)
T ss_pred EEEeCccHHHHHHHHHhcCC--CCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHc----CCCCCC
Confidence 45667779999988765544 78888887755444 23566777764332211 1111 23565554 222222
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
+.+. .+...-.||..+.. ++++. ++++|+|-+-. +....++ +.+. .+++ .|.-|.+|.+
T Consensus 147 ~~v~-~~hnETstGv~~~~--~~~i~------~~~lvVDa~Ss-~g~~pid--------v~~~--~v~~-~saqK~lGP~ 205 (365)
T PLN02452 147 KFVH-ICANETIHGVEFKD--YPDVG------NVPLVADMSSN-FLSKPVD--------VSKY--GVIY-AGAQKNVGPS 205 (365)
T ss_pred cEEE-ECCCCCCCcEecCc--ccccC------CCeEEEECCcc-ccCcccC--------HHHc--CEEE-EecccccCCC
Confidence 3333 35556677886542 33332 37899997643 3211111 1111 3444 5889999999
Q ss_pred ccccceeEeeeCCHHHHHH
Q 047180 277 GQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~ 295 (337)
| +|++++ +++.+++
T Consensus 206 G--l~~v~v---r~~~l~~ 219 (365)
T PLN02452 206 G--VTIVII---RKDLIGN 219 (365)
T ss_pred C--eEEEEE---cHHHHhh
Confidence 9 577765 4544443
No 372
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=95.97 E-value=0.5 Score=46.17 Aligned_cols=164 Identities=11% Similarity=0.009 Sum_probs=89.1
Q ss_pred EEeeccchhHHHHHHHHHhhh----C-CC-CeEEEcCCCCcchHH-HHHhcCc-------------eeeEeeecc---CC
Q 047180 121 AVQSLSGTGACRLFADFQKRF----H-PD-SQIYIPVPTWSNHHN-IWRDAHV-------------TQRTFHYYH---PG 177 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~----~-pg-d~Vlv~~P~y~~y~~-~~~~~G~-------------~~~~~~~~~---~~ 177 (337)
++.|.+|++|+..++.+.... . |. .+++.-..+|.+-.- .+...|. .+..+|... ..
T Consensus 108 vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~ 187 (449)
T COG0161 108 VFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRG 187 (449)
T ss_pred EEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccC
Confidence 588999999999888544332 1 33 348888888876432 2222220 011111100 00
Q ss_pred C---CC----CChHHHHHHHHcCC-CCeEEEEe-CCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCc
Q 047180 178 T---KG----LDFAALMDDIKNAP-NGSFFLLH-ACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPE 247 (337)
Q Consensus 178 ~---~~----~d~~~l~~~l~~~~-~~~~ili~-~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~ 247 (337)
. +. -..++|++.+..+. .+...+|. |--+--+|.. +++.-|+++-++|++||+++|.||+=.+|.-
T Consensus 188 ~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGR---- 263 (449)
T COG0161 188 FFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGR---- 263 (449)
T ss_pred CCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCc----
Confidence 0 11 12456777666543 33333332 2212225554 6677899999999999999999999888742
Q ss_pred cchHHHHHhhhc----CCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 248 RDAKAIRIFLKD----GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 248 ~~~~~~~~~~~~----~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
... .|+.+ .+++++ ++|...-.=+-+|.+++ +.++.+.+.+
T Consensus 264 TG~----~FA~e~~gi~PDi~~---~aKGLT~GY~Pl~a~l~---~~~I~~~~~~ 308 (449)
T COG0161 264 TGK----MFACEHAGIVPDILC---LAKGLTGGYLPLSAVLT---SDRIYEAFSD 308 (449)
T ss_pred Cch----hhhhhhcCCCCCeee---ecccccccchhhHhHhh---hHHHHHHHhc
Confidence 111 12221 245555 46766533335665553 4555555544
No 373
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=95.81 E-value=0.28 Score=46.85 Aligned_cols=169 Identities=14% Similarity=0.092 Sum_probs=84.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEE--EcCCCCcc-hHHHHHhcCceeeEeeeccCC--CCCCChHHHHHHHHcCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIY--IPVPTWSN-HHNIWRDAHVTQRTFHYYHPG--TKGLDFAALMDDIKNAPN 195 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vl--v~~P~y~~-y~~~~~~~G~~~~~~~~~~~~--~~~~d~~~l~~~l~~~~~ 195 (337)
.+.+.||+++...+..-|.. +||+++ +.+=.|+. +...++..| ++..+...... +..++++.+ ...++
T Consensus 71 lfl~GggT~~~ea~~~Nll~--~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~----~~~~d 143 (364)
T PRK12462 71 VFLQGGSSLQFSMIPMNFSR--PGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL----DWDAR 143 (364)
T ss_pred EEEeccHHHHHHHHHHHcCC--CCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh----ccCCC
Confidence 45566679999888754444 788554 55545554 234556666 44333211111 123444443 21122
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
...+.+ |.-.-.||..++ ++.+.++.++|.|-+-. +...+++ +.+ . . ++..|.=|++|.
T Consensus 144 ~~~v~~-t~NETstGv~~~--------~~~~~~~~llvvD~sS~-~~s~pid--------~~~-~-d-vi~agsQKnlgP 202 (364)
T PRK12462 144 APFRHY-VSNETVEGLQFP--------DAAGLPDSPLIADMSSD-FMSRPFD--------VEA-Y-G-MVYAHAQKNLGP 202 (364)
T ss_pred CcEEEE-ccCCCCceEecC--------cccccCCCeEEEEcCch-hhCCCCC--------hHH-c-c-EEEeeccccCCC
Confidence 233333 533556788775 22333689999997643 3221111 111 1 3 444566899999
Q ss_pred cccccceeEeeeCCHHHHHHHHHHHHhh--------hcccccCCChhHHHHHHHH
Q 047180 276 YGQRVGCLSVLCEDEKQAVAVKSQLQQL--------ARPMYSNPPVHGALIVSTI 322 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~q~~~~~~ 322 (337)
||+ +.+++ +++.+++.....-.+ ..+++..||.+.-.++..+
T Consensus 203 ~Gl--tvviv---s~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~ 252 (364)
T PRK12462 203 AGV--TVAII---RRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALV 252 (364)
T ss_pred Cce--EEEEE---CHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHH
Confidence 886 44443 455444432210000 1234445666665555555
No 374
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=95.78 E-value=0.13 Score=50.85 Aligned_cols=122 Identities=11% Similarity=0.009 Sum_probs=74.5
Q ss_pred EEeeccchhHHHHHHHHHhhhC------------------------CC---CeEEEcCCCCcchHHH-HHhcCce-----
Q 047180 121 AVQSLSGTGACRLFADFQKRFH------------------------PD---SQIYIPVPTWSNHHNI-WRDAHVT----- 167 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~------------------------pg---d~Vlv~~P~y~~y~~~-~~~~G~~----- 167 (337)
++.+++|++|...++.+...+. +| .+|+...-+|.+.... +...|..
T Consensus 125 v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~ 204 (464)
T TIGR00699 125 VWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKL 204 (464)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCcccccc
Confidence 5789999999999987653220 11 2799999999886533 3233321
Q ss_pred ------eeEeeeccCC-CCC-----------CChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhc
Q 047180 168 ------QRTFHYYHPG-TKG-----------LDFAALMDDIKNAPNGSFFLLHACAHNPTGVDP-SEEQWKEISYQIKAK 228 (337)
Q Consensus 168 ------~~~~~~~~~~-~~~-----------~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~-s~~~~~~l~~~~~~~ 228 (337)
...+|+.... .+. -+++.+++.+.........+|.-.-+.-.|.+. +++-+++|.++|+++
T Consensus 205 ~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~ 284 (464)
T TIGR00699 205 DIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH 284 (464)
T ss_pred CCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc
Confidence 0111111000 000 134556666754333333333333344456665 799999999999999
Q ss_pred CceeEEcccCCCCC
Q 047180 229 GHFPFFDMAYQGFA 242 (337)
Q Consensus 229 ~~~ii~De~Y~~~~ 242 (337)
|+++|.||+..+|.
T Consensus 285 g~lLI~DEV~tGfG 298 (464)
T TIGR00699 285 NVAFIVDEVQTGVG 298 (464)
T ss_pred CCEEEEeeeeeCCC
Confidence 99999999998874
No 375
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=95.75 E-value=0.17 Score=48.30 Aligned_cols=160 Identities=11% Similarity=-0.035 Sum_probs=84.4
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEee-ccchhHHHHHHHHHhhhCCCCeEEEcCCCCc-chHHHHHhc--CceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQS-LSGTGACRLFADFQKRFHPDSQIYIPVPTWS-NHHNIWRDA--HVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t-~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~-~y~~~~~~~--G~~~~~ 170 (337)
+.+.|+.+++++... ++.+ ++.+ .+|+.++..++..+.. ++..++..=.|+ .+...++.. +.++..
T Consensus 43 ~~~~r~~l~~l~~~~-----~~~~--v~f~~gs~T~a~~~~~~~l~~---~~~l~i~~G~~~~~~~~~a~~~~~~~~~~~ 112 (361)
T TIGR01366 43 VGRVREGLAELFSLP-----DGYE--VILGNGGATAFWDAATFGLIE---KKSLHLSFGEFSSKFAKAVKLAPWLGEPII 112 (361)
T ss_pred HHHHHHHHHHHhCCC-----CCce--EEEECCchhHHHHHHHHhccc---ccccEEecCHHHHHHHHHHHhhhccCCceE
Confidence 345677777766221 1123 3455 5589999988865532 233333332232 223344432 235555
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++. +. +..++. .+. ++ ..+|..+...|-||.+.+.+++ ++++++++|+|-+-. +..... +
T Consensus 113 ~~~-~~-~~~~~~-----~~~--~~-~~lV~~~h~et~tG~~~pi~~I------~~~~g~~~iVDavqs-~g~~~i--d- 172 (361)
T TIGR01366 113 VTA-DP-GSAPEP-----QAD--PG-VDVIAWAHNETSTGVAVPVRRP------EGSDDALVVIDATSG-AGGLPV--D- 172 (361)
T ss_pred Eec-CC-CCCCCC-----ccC--CC-CCEEEEcccCCccceecccccc------cccCCCeEEEEcCcc-ccCCCC--C-
Confidence 554 21 222332 121 23 3344447789999999986553 478899999997643 221111 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+ .. -++ ++.|--|.||.+|- ++++++ +++.++++
T Consensus 173 --v---~~--~D~-~~~s~~K~lg~~~G-l~~~~~---s~~~~~~~ 206 (361)
T TIGR01366 173 --I---AE--TDV-YYFAPQKNFASDGG-LWLAIM---SPAALERI 206 (361)
T ss_pred --H---HH--CCE-EEEEchhhcCCCCc-eEEEEE---CHHHHhhh
Confidence 1 11 133 55677899998853 444333 45544443
No 376
>PLN02672 methionine S-methyltransferase
Probab=95.70 E-value=0.26 Score=53.26 Aligned_cols=216 Identities=10% Similarity=0.042 Sum_probs=128.1
Q ss_pred hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh----CCCCeEEEcCCCCcc
Q 047180 81 IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF----HPDSQIYIPVPTWSN 156 (337)
Q Consensus 81 ~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~----~pgd~Vlv~~P~y~~ 156 (337)
+......-|.|+.|...||+.||.|+...+...+.+++| ++-+.-..|+..++++++-. ..+.+..+| ..
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 487 (1082)
T PLN02672 414 LKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNV--VVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KK 487 (1082)
T ss_pred HccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccce--EEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HH
Confidence 334456789899999999999999985544444667764 56666788888777665421 123333333 12
Q ss_pred hHHHHHhcCcee-----eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCce
Q 047180 157 HHNIWRDAHVTQ-----RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHF 231 (337)
Q Consensus 157 y~~~~~~~G~~~-----~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ 231 (337)
+...+...|... ..+.+.+. -..- +.+.+.+++.. ..++++.- --+-..|....+.|++.+++.|..
T Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 559 (1082)
T PLN02672 488 WLTSLAIENATSDSKSDDVITVIEA-PRQS--DLVIELIKKLK--PQVVVTGM---ADFEMRTSTAFEHLLNVTAEIGAR 559 (1082)
T ss_pred HHhHhhhhcccccCccCCeEEEEeC-CCcc--hHHHHHHHhCC--CeEEEEec---cchhhhhHHHHHHHHHHHHhhCcE
Confidence 344444443110 01111111 0122 24444454322 33444321 225567778899999999999999
Q ss_pred eEEccc-CCCCCCCCCccchHHHHHhhhc--CCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccc
Q 047180 232 PFFDMA-YQGFASGDPERDAKAIRIFLKD--GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMY 308 (337)
Q Consensus 232 ii~De~-Y~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~ 308 (337)
++.|+. |.++.+. ......++.++.. ..+..++.++-|+=-.+.|-+.|++- .+..+. ..|.+...-++
T Consensus 560 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~ 631 (1082)
T PLN02672 560 LFLDISDHLELSSL--PGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVIS--ENEAVL----KALSKTGEVLE 631 (1082)
T ss_pred EEEehhhheeeccC--CCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEec--CcHHHH----HHHHHHHHhhc
Confidence 999974 5555542 1222234444432 35778888999998888999999873 444444 44444444556
Q ss_pred cCCChhHHHH
Q 047180 309 SNPPVHGALI 318 (337)
Q Consensus 309 ~~~~~~~q~~ 318 (337)
++.+...|.-
T Consensus 632 ~~~~~~~~~~ 641 (1082)
T PLN02672 632 GRTAIISQFY 641 (1082)
T ss_pred cchHHHHHHH
Confidence 7777666654
No 377
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=94.84 E-value=0.98 Score=43.48 Aligned_cols=153 Identities=13% Similarity=0.127 Sum_probs=85.8
Q ss_pred eeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCC--CHHHHHHHHHH------HhCCCCcccccCceeEEeeccc
Q 047180 56 VGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGG--SVKMVEETLKL------AYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 56 l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G--~~~lr~aia~~------~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
+|.|.|. ..+|+.|.+-+-+ ++++...|+|.+- .+...|++-+| +.|-+. . + .-.-.++
T Consensus 80 iG~GyY~-----~~~P~vI~rnile-~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~V---A--N--ASm~Dea 146 (450)
T COG0403 80 IGAGYYD-----TYTPPVILRNILE-NPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDV---A--N--ASMLDEA 146 (450)
T ss_pred ccCcccC-----CcCcHHHHHHhhc-CccccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCc---c--c--chhhhhH
Confidence 5777763 5567777653222 4566778888531 11233343333 223221 0 0 0122344
Q ss_pred hhHHHHHHHHHhhhC-CCCeEEEcCCCCcchHHHHH----hcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEe
Q 047180 128 TGACRLFADFQKRFH-PDSQIYIPVPTWSNHHNIWR----DAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLH 202 (337)
Q Consensus 128 ~~al~~~~~~l~~~~-pgd~Vlv~~P~y~~y~~~~~----~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~ 202 (337)
+.+-..++.+..... +.++++|+.=++|.+...++ -.|.+++.++.. |.+.+++. . ......+++
T Consensus 147 TAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~-~-~~~~~gv~v- 216 (450)
T COG0403 147 TAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESA-D-DGDVFGVLV- 216 (450)
T ss_pred HHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhc-c-ccCeEEEEE-
Confidence 444444333322211 35899999999999988775 345566655431 66777765 3 223344555
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
++|...=...+++++|.+.+++++.++++
T Consensus 217 ---QyP~~~G~~~~d~~~l~~~~h~~~al~~v 245 (450)
T COG0403 217 ---QYPNTFGIVEEDLRALIEAAHSAGALVIV 245 (450)
T ss_pred ---ecCCCCCccchhHHHHHHHHhhcCCEEEE
Confidence 44444435567899999999999876665
No 378
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=94.79 E-value=0.043 Score=52.87 Aligned_cols=92 Identities=20% Similarity=0.155 Sum_probs=70.0
Q ss_pred eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC---CeEEEEeCCCCCCCCCCCCHHHHHHHH
Q 047180 146 QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN---GSFFLLHACAHNPTGVDPSEEQWKEIS 222 (337)
Q Consensus 146 ~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~ili~~~p~NPTG~~~s~~~~~~l~ 222 (337)
.++..+-+-..........|.++..++.+ + +++++.+.|.+++++... .+.+++- +-=|..+-.-+++++|.
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~td-~-n~~mr~~~L~~AIe~D~arGlIPf~v~a---t~GTT~~ca~D~l~elg 258 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPTD-E-NFGMRGDTLRKAIEEDIARGLIPFFVCA---TLGTTSSCAFDELEELG 258 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeecc-c-CcCCCHHHHHHHHHHHHhCCCccEEEEE---eecCccccccccHHHhc
Confidence 56777777788888888889998888873 3 799999999998876321 2344443 23344445668999999
Q ss_pred HHHHhcCceeEEcccCCCCC
Q 047180 223 YQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 223 ~~~~~~~~~ii~De~Y~~~~ 242 (337)
.+|+++++|+-+|.+|.+-+
T Consensus 259 ~Vc~~~glWLHVDAAYAGsa 278 (511)
T KOG0628|consen 259 PVCREEGLWLHVDAAYAGSA 278 (511)
T ss_pred chhhhcCEEEEeehhhcccc
Confidence 99999999999999998644
No 379
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=94.44 E-value=3.4 Score=39.44 Aligned_cols=191 Identities=16% Similarity=0.133 Sum_probs=105.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH-HHHHhcC
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH-NIWRDAH 165 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~-~~~~~~G 165 (337)
..|... -..+|-+++++.+-+. + + .++.+++|++|-.+++.+.......-.++-..-+|..-. ..+...|
T Consensus 87 ~~~~~~-pi~~~Ae~L~s~~P~~----l--~--~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~ 157 (442)
T KOG1404|consen 87 SGYLNP-PIHDLAEALVSKLPGD----L--K--VVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTG 157 (442)
T ss_pred ccccCC-cHHHHHHHHHHhCCCC----c--e--EEEEecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhccccc
Confidence 456532 3567888887765322 1 1 257899999999988865544322335555566665543 3344444
Q ss_pred ceeeEeeeccC----------C----CCCCC-----h----HHHHHHHHcC-CCCeEEEEeCCCCCCCCCC-CCHHHHHH
Q 047180 166 VTQRTFHYYHP----------G----TKGLD-----F----AALMDDIKNA-PNGSFFLLHACAHNPTGVD-PSEEQWKE 220 (337)
Q Consensus 166 ~~~~~~~~~~~----------~----~~~~d-----~----~~l~~~l~~~-~~~~~ili~~~p~NPTG~~-~s~~~~~~ 220 (337)
......++... + -|+=+ - +++++.+... +.....++-=+-+---|.+ +++--+++
T Consensus 158 ~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka 237 (442)
T KOG1404|consen 158 LSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKA 237 (442)
T ss_pred CCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHH
Confidence 44333322110 0 00001 1 2333333221 2232333312222223433 67788999
Q ss_pred HHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE-EecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 221 ISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL-AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 221 l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
.-++|+++|.+.|.||+-.+|..- ...+. |.. .+++= +-+++|..| .|.-+|.++. .+++.+-+.+
T Consensus 238 ~~~~v~k~Ggl~IaDEVqtGfGRt---G~~wg---fe~--h~v~PDIvTmAKgiG-nG~Pl~AVvt---t~EIa~v~~~ 304 (442)
T KOG1404|consen 238 AYKVVRKRGGLFIADEVQTGFGRT---GHMWG---FES--HGVVPDIVTMAKGIG-NGFPLGAVVT---TPEIADVLNQ 304 (442)
T ss_pred HHHHHHHcCCEEEehhhhhccccc---ccccc---ccc--cCCCccHHHHHhhcc-CCCcceeeec---CHHHHHHHHh
Confidence 999999999999999998887421 01111 211 11111 458999999 6999999874 5666555444
No 380
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=94.02 E-value=1.3 Score=47.29 Aligned_cols=147 Identities=12% Similarity=0.124 Sum_probs=85.3
Q ss_pred eeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCC-----CC----HHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 56 VGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMG-----GS----VKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 56 l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~-----G~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
++.|.|. ...++.+.+.+.. ++++...|+|.+ |. -+|...+++.. |-+ ..+ .-...+
T Consensus 69 ig~G~y~-----~~~p~~i~r~v~~-~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt-Gm~-----~aN--aSl~d~ 134 (939)
T TIGR00461 69 IGMGYYG-----TILPPVIQRNLLE-NPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT-GLP-----VAN--ASLLDE 134 (939)
T ss_pred CCCCcCC-----CcCChHHHHHHHh-CchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH-CCC-----hhh--hhccch
Confidence 3666653 4466777654333 344456777754 32 22334444432 322 111 123345
Q ss_pred chhHHHHHHHHHh-hhCCCCeEEEcCCCCcchHHHHH----hcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEE
Q 047180 127 GTGACRLFADFQK-RFHPDSQIYIPVPTWSNHHNIWR----DAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLL 201 (337)
Q Consensus 127 ~~~al~~~~~~l~-~~~pgd~Vlv~~P~y~~y~~~~~----~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili 201 (337)
++.+...++.... ...++++|+|++=.+|.+...++ ..|.+++.++ ++++++.+ +...+++
T Consensus 135 atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~----~~~~v~~ 200 (939)
T TIGR00461 135 GTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV----DVFGCLL 200 (939)
T ss_pred hhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC----CEEEEEE
Confidence 5555554443322 11135899999999999886555 6788877663 23444433 2234444
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 202 HACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 202 ~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
.+| |=+|.+. ++++|++.+++++.+++.+
T Consensus 201 -q~P-n~~G~ie---d~~~i~~~~h~~gal~~~~ 229 (939)
T TIGR00461 201 -QYP-ATDGSIL---DYKQLIDALHSHKSLVSVA 229 (939)
T ss_pred -ECC-CCCeEEe---cHHHHHHHHHHcCCEEEEE
Confidence 455 6789885 6889999999999988885
No 381
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=93.03 E-value=0.78 Score=44.71 Aligned_cols=74 Identities=15% Similarity=0.174 Sum_probs=46.7
Q ss_pred CCeEEEcCCCCcchHHHHH----hcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHH
Q 047180 144 DSQIYIPVPTWSNHHNIWR----DAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWK 219 (337)
Q Consensus 144 gd~Vlv~~P~y~~y~~~~~----~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~ 219 (337)
.++|+++.-.+|.+...++ ..|.+++.++..+ +...| . .+...+++ .+| |=.|.+-+ ++
T Consensus 154 ~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~--~~~~d--------~--~~~a~v~v-q~P-n~~G~~ed---~~ 216 (429)
T PF02347_consen 154 RNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDE--DGTTD--------D--DDTAAVMV-QNP-NTFGVFED---IK 216 (429)
T ss_dssp --EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBT--TCSB---------S--TTEEEEEE-ESS--TTSB--T---HH
T ss_pred CcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecccc--cCCcc--------c--cCeEEEEe-ecC-CCCceEee---HH
Confidence 4699999999999988554 4788899888743 22233 1 23334444 566 46787754 88
Q ss_pred HHHHHHHhcCceeEE
Q 047180 220 EISYQIKAKGHFPFF 234 (337)
Q Consensus 220 ~l~~~~~~~~~~ii~ 234 (337)
+|.+++.+++.+++.
T Consensus 217 ~i~~~~h~~gal~~~ 231 (429)
T PF02347_consen 217 EIADIAHAAGALVIV 231 (429)
T ss_dssp HHHHHHHHTT-EEEE
T ss_pred HHHHHHHHcCCEEEE
Confidence 999999999988776
No 382
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=92.54 E-value=1.9 Score=39.05 Aligned_cols=148 Identities=18% Similarity=0.121 Sum_probs=81.0
Q ss_pred eeccchhH-HHHHHHHHhhhCCCCe--EEEcCCCCcchHHHHHhcCceeeEee-eccCCCCCCChHHHHHHHHcCCCCeE
Q 047180 123 QSLSGTGA-CRLFADFQKRFHPDSQ--IYIPVPTWSNHHNIWRDAHVTQRTFH-YYHPGTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 123 ~t~g~~~a-l~~~~~~l~~~~pgd~--Vlv~~P~y~~y~~~~~~~G~~~~~~~-~~~~~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
+++-++|. +.+.+..+....|..+ ||.---.-+.+..+ -.+|.+++-+. ..+.+.-.-|++.+++.+++..+. .
T Consensus 80 vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi-~~agfepiiie~i~d~d~l~tdleav~~~iee~g~d-c 157 (432)
T KOG3843|consen 80 VVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSI-IHAGFEPIIIENILDGDELITDLEAVEAIIEELGED-C 157 (432)
T ss_pred EEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHH-HhcCCCceeeeccccchHHHHhHHHHHHHHHHhCCc-e
Confidence 34444433 4444444443335432 23222222233333 35888866553 333322344788888887764443 3
Q ss_pred EEEeCCCCCCCCCC--CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh---hcCCeEEEEecccccc
Q 047180 199 FLLHACAHNPTGVD--PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL---KDGHLLGLAQSYAKNM 273 (337)
Q Consensus 199 ili~~~p~NPTG~~--~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~S~SK~~ 273 (337)
++++ |.-|..- -+++.+++|+.+|..|++.-|+..+|.--. ...+.... ..+.---++.|+-|+|
T Consensus 158 ilci---~sttscfapr~pd~leaiaaica~~diphivnnayglqs-------ee~i~~iaa~~~~grida~vqsldknf 227 (432)
T KOG3843|consen 158 ILCI---HSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQS-------EECIHKIAAAAECGRIDAFVQSLDKNF 227 (432)
T ss_pred EEEE---eecccccCCCCCchHHHHHHHHHccCchhhhccccccch-------HHHHHHHHHHhhhccHHHHHHHhhhcc
Confidence 4433 3333322 356899999999999999999999996321 11222221 2222224568999999
Q ss_pred cccccccceeEe
Q 047180 274 GLYGQRVGCLSV 285 (337)
Q Consensus 274 ~~~G~RvG~~~~ 285 (337)
-.| +|=.++
T Consensus 228 ~vp---vggaii 236 (432)
T KOG3843|consen 228 MVP---VGGAII 236 (432)
T ss_pred eee---cchhHh
Confidence 875 555444
No 383
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.46 E-value=0.45 Score=46.02 Aligned_cols=136 Identities=14% Similarity=0.105 Sum_probs=71.0
Q ss_pred CCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---------CCC-CeEEEEeCCCCCCCCCC
Q 047180 143 PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---------APN-GSFFLLHACAHNPTGVD 212 (337)
Q Consensus 143 pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---------~~~-~~~ili~~~p~NPTG~~ 212 (337)
||.-|+--.---.....-++..|+.++-+.- + |...|++.|.+ ++. ++++++.-.---=-|.
T Consensus 220 ~gsLIiSDelNHaSi~~GaRLSgAtiRVfkH----N---dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~- 291 (519)
T KOG1357|consen 220 KGSLIISDELNHASLITGARLSGATTRVFRH----N---DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGT- 291 (519)
T ss_pred CCcceeeccccchheeccccccCceEEEEec----C---CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCe-
Confidence 6655655554444455556777877765532 1 23444444432 111 1233332111001122
Q ss_pred CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh--cCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 213 PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK--DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 213 ~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
-..+.+++++.+++..+++.||++..=+-| .... ....+.. ..+--|..++|.|+||..| ||+.+ ++
T Consensus 292 --iv~Lp~vvalkkkykayl~lDEAHSiGA~g--~tGr-gvce~~g~d~~dvDImMGtftKSfga~G---Gyiag---sk 360 (519)
T KOG1357|consen 292 --IVDLPEVVALKKKYKAYLYLDEAHSIGAMG--ATGR-GVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAG---SK 360 (519)
T ss_pred --ecccHHHHHhhccccEEEEeeccccccccC--CCCc-ceeeccCCCchhheeecceehhhccccc---ceecC---cH
Confidence 235778999999999999999998642211 0000 0111111 1123455689999999766 77653 55
Q ss_pred HHHHHHH
Q 047180 291 KQAVAVK 297 (337)
Q Consensus 291 ~~~~~~~ 297 (337)
++++.++
T Consensus 361 ~lid~lr 367 (519)
T KOG1357|consen 361 ELIDYLR 367 (519)
T ss_pred HHHhhhc
Confidence 5555443
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=90.39 E-value=1.1 Score=43.12 Aligned_cols=80 Identities=14% Similarity=-0.007 Sum_probs=53.6
Q ss_pred hHHHHHhcC---ceeeEeeeccCCCCCCChHHHHHHHHcCCCC--eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCce
Q 047180 157 HHNIWRDAH---VTQRTFHYYHPGTKGLDFAALMDDIKNAPNG--SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHF 231 (337)
Q Consensus 157 y~~~~~~~G---~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~--~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ 231 (337)
....+...| -.++.++. ++ ...+++++|++.+..+..+ .=++++++ -=|-+.=--+.+..++++|++|++|
T Consensus 210 i~kaAa~lg~gtd~c~~v~t-~e-~Gkm~~~dLe~kile~k~kg~~Pf~vnaT--aGTTV~GAFDdL~~iadiC~k~~lW 285 (510)
T KOG0629|consen 210 IKKAAAFLGLGTDHCIKVKT-DE-RGKMIPDDLEKKILEAKAKGGVPFFVNAT--AGTTVLGAFDDLNGIADICEKHKLW 285 (510)
T ss_pred HHHHHHHhccCCceeEEecc-cc-cCccchHHHHHHHHHHHhcCCCCeEEEec--CCceeeeccCcHHHHHHHHHhcCEE
Confidence 345556666 35777776 33 5789999999987654322 11344332 2222222236799999999999999
Q ss_pred eEEcccCCC
Q 047180 232 PFFDMAYQG 240 (337)
Q Consensus 232 ii~De~Y~~ 240 (337)
+-+|.+|.+
T Consensus 286 mHvDAAwGG 294 (510)
T KOG0629|consen 286 MHVDAAWGG 294 (510)
T ss_pred EEeeccccc
Confidence 999999987
No 385
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=90.13 E-value=3.3 Score=42.08 Aligned_cols=143 Identities=15% Similarity=0.073 Sum_probs=92.9
Q ss_pred CCCCCCCC---CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH---hhh-CCC--CeEEEcCCCCc
Q 047180 85 ANMEYLPM---GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ---KRF-HPD--SQIYIPVPTWS 155 (337)
Q Consensus 85 ~~~~Y~~~---~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l---~~~-~pg--d~Vlv~~P~y~ 155 (337)
..|-|.|. +|+.++...+-.++....+ + +.+ .++-+.|.++-+.-+.++ .+. +.| ..++||.-.-.
T Consensus 567 nIHPF~P~eQaqGY~~lf~~Le~~Lc~iTG--~--D~~-s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHG 641 (1001)
T KOG2040|consen 567 NIHPFAPVEQAQGYQQLFTELEKDLCEITG--F--DSF-SLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHG 641 (1001)
T ss_pred cCCCCCchHHHhhHHHHHHHHHHHhheeec--c--cce-eecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccC
Confidence 45667774 5777777776666643221 1 222 355555544433333322 221 122 67888887777
Q ss_pred chHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 156 NHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 156 ~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
.--..+.++|.+++++.+.. +..+|..+|.+..+++.+.-..+.+.+| +..-.=++.++.++++..+||--|-.|
T Consensus 642 TNPASA~MagmkvvpV~~~~--~G~id~~dLk~kaekh~~~Laa~MvTYP---ST~GvfE~~i~d~cd~iHehGGQVYlD 716 (1001)
T KOG2040|consen 642 TNPASAAMAGMKVVPVGCDA--NGNIDMVDLKAKAEKHKDNLAALMVTYP---STHGVFEEGIDDICDIIHEHGGQVYLD 716 (1001)
T ss_pred CChhhHHhcCCEEEEeeccC--CCCccHHHHHHHHHHhhhhhheeEEecc---cccccccccHHHHHHHHHhcCCEEEec
Confidence 77778899999999998743 4679999999888765443333333444 444445677899999999999999999
Q ss_pred cc
Q 047180 236 MA 237 (337)
Q Consensus 236 e~ 237 (337)
-+
T Consensus 717 GA 718 (1001)
T KOG2040|consen 717 GA 718 (1001)
T ss_pred CC
Confidence 65
No 386
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=89.31 E-value=2.5 Score=39.50 Aligned_cols=105 Identities=10% Similarity=0.053 Sum_probs=65.2
Q ss_pred EEeeccchhHHHHHH-HHHhhhCCCCeEEEcCC-CCcchH----HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC
Q 047180 121 AVQSLSGTGACRLFA-DFQKRFHPDSQIYIPVP-TWSNHH----NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP 194 (337)
Q Consensus 121 ~~~t~g~~~al~~~~-~~l~~~~pgd~Vlv~~P-~y~~y~----~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 194 (337)
++++.+.+--++-.+ .++. ..+|+.|+++.= +||.-. ..++..|.. +.+ ...+.++.+++++.
T Consensus 96 vvv~dtts~nl~k~L~aalr-~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~----~~~~~P~~~~~~~~--- 164 (407)
T COG3844 96 VVVTDTTSINLFKVLAAALR-PQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL----EGVIAPRALEEAIT--- 164 (407)
T ss_pred eEEeCCcchHHHHHHHHHhc-cCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc----eeeeChHHHHHhhc---
Confidence 455655554444333 3333 225888777653 344322 233334322 211 13456778888776
Q ss_pred CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC
Q 047180 195 NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
+...+++++.=|--||..+. +.+|-+++.+++++++-|-++.
T Consensus 165 dd~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHs 206 (407)
T COG3844 165 DDVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHS 206 (407)
T ss_pred cceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcc
Confidence 35667777888888999986 6678888999999999998875
No 387
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=87.39 E-value=3.7 Score=38.46 Aligned_cols=126 Identities=17% Similarity=0.152 Sum_probs=72.0
Q ss_pred ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcC
Q 047180 182 DFAALMDDIKNAPNGSFFLLHACAHNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDG 260 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 260 (337)
|.++|+.+++. +.-..+++ -.-+--.|.+.+ ..-+++..++|.+|++++|.||+-.++..- .. .... ......
T Consensus 195 d~eale~~l~~-~~vaaFiv-EPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RT-Gk--~la~-d~env~ 268 (427)
T KOG1402|consen 195 DAEALEVALKS-PNVAAFIV-EPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLART-GK--LLAC-DYENVR 268 (427)
T ss_pred CHHHHHHHhcC-CCeeEEEe-eccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhccccc-Cc--EEEe-ehhhcC
Confidence 57888888875 32233444 345666676654 456899999999999999999998887521 00 0000 011123
Q ss_pred CeEEEEeccccccccccc-ccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 261 HLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 261 ~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
++++++ .|.++ .|+ -+..+. .+.++...+.. .+ ..+++. -+.++.+++.++|+
T Consensus 269 PDivil---gKalS-GG~~Pvsavl---~~~~im~~~~p-ge--HgsTyg-gNpLg~~vaiAale 322 (427)
T KOG1402|consen 269 PDIVIL---GKALS-GGVYPVSAVL---ADDDIMLNIKP-GE--HGSTYG-GNPLGCAVAIAALE 322 (427)
T ss_pred CCeEEE---ecccc-CCeeeeEEEE---ecHHHHhccCC-Cc--cccccC-CChHHHHHHHHHHH
Confidence 455554 57776 454 333333 25554433221 11 234454 35677777776665
No 388
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=85.87 E-value=13 Score=35.80 Aligned_cols=129 Identities=13% Similarity=0.054 Sum_probs=72.9
Q ss_pred CCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCce
Q 047180 88 EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVT 167 (337)
Q Consensus 88 ~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~ 167 (337)
-|+...-.-++-+.||+|+ |.. +. ++...|= .++..+..+++. .||.+.+..=.-.....-++....+
T Consensus 134 FYGt~DvHldlE~~iakF~-G~E------~a--ivYs~gF-~ti~S~ipafsK--rGDIi~~de~~nfaIq~GlqlSRS~ 201 (467)
T KOG1358|consen 134 FYGTIDVHLDLEKRIAKFM-GTE------DA--IVYSYGF-STIESAIPAFSK--RGDIIFVDEAVNFAIQKGLQLSRST 201 (467)
T ss_pred ccccceeecccHHHHHHhh-CCc------ce--eeecccc-chhhhcchhhhc--cCcEEEEehhhhHHHHHHHhhhhhe
Confidence 4666655667888899986 332 11 2233322 233333344554 6998887765555444455555445
Q ss_pred eeEeeeccCCCCCCChHHHHHHHHc-------CCC----CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 168 QRTFHYYHPGTKGLDFAALMDDIKN-------APN----GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 168 ~~~~~~~~~~~~~~d~~~l~~~l~~-------~~~----~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
++.+ .. -|.++++..+.+ .++ +..+++-. ---+||...+ +.+|+++..++.+.||.||
T Consensus 202 i~~F---kh----ndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EG-l~~N~g~i~p---l~~iv~lk~Kyk~RvildE 270 (467)
T KOG1358|consen 202 ISYF---KH----NDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEG-LYANTGDICP---LPEIVKLKNKYKFRVILDE 270 (467)
T ss_pred eEEe---cC----CCHHHHHHhccCcchhhhhccccccceEEEEEEe-eccCCCcccc---cHHHHHHHhhheEEEEEec
Confidence 5543 22 133444333322 111 23344433 3455888877 5567888889999999999
Q ss_pred cCC
Q 047180 237 AYQ 239 (337)
Q Consensus 237 ~Y~ 239 (337)
.|+
T Consensus 271 s~S 273 (467)
T KOG1358|consen 271 SLS 273 (467)
T ss_pred ccc
Confidence 885
No 389
>PRK12566 glycine dehydrogenase; Provisional
Probab=82.35 E-value=28 Score=37.50 Aligned_cols=71 Identities=8% Similarity=0.045 Sum_probs=46.0
Q ss_pred CCeEEEcCCCCcchHHHHH----hcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHH
Q 047180 144 DSQIYIPVPTWSNHHNIWR----DAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWK 219 (337)
Q Consensus 144 gd~Vlv~~P~y~~y~~~~~----~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~ 219 (337)
..+|+|+.=..|.+...++ ..|.+++. +++++.+. .+...+++ -+| |=.|.+ ++++
T Consensus 168 ~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~--~~~~~v~v-q~P-~~~G~i---~d~~ 227 (954)
T PRK12566 168 SNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAA--HAVFGALL-QYP-DTHGEI---RDLR 227 (954)
T ss_pred CCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCC--CCEEEEEE-ECC-CCceEE---ccHH
Confidence 4689999999999887665 34545442 22223222 12234445 456 568888 4688
Q ss_pred HHHHHHHhcCceeEE
Q 047180 220 EISYQIKAKGHFPFF 234 (337)
Q Consensus 220 ~l~~~~~~~~~~ii~ 234 (337)
+|.+.+++++.++|.
T Consensus 228 ~i~~~~h~~gal~~~ 242 (954)
T PRK12566 228 PLIDQLHGQQALACV 242 (954)
T ss_pred HHHHHHHHcCCEEEE
Confidence 999999998877653
No 390
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=80.92 E-value=12 Score=35.63 Aligned_cols=157 Identities=16% Similarity=0.125 Sum_probs=86.2
Q ss_pred cccchHHHHHHHH-hcCcCCCCCCCC--CCCHHHHHHHHHHH-------hCCCCcccccCceeEEeeccchhHHHHHHHH
Q 047180 68 PVVLECVREAERR-IAGTANMEYLPM--GGSVKMVEETLKLA-------YGDNSEFIKDKRIAAVQSLSGTGACRLFADF 137 (337)
Q Consensus 68 ~~~~~~v~~a~~~-~~~~~~~~Y~~~--~G~~~lr~aia~~~-------~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~ 137 (337)
-++..+|.+|+-. +.....-+|+-. -|=.++.+.|-..+ |+-+ .+...| .++.-+|+-|-..+...
T Consensus 50 NFts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ld---p~kWGV-NVQp~SGSPANfavYta 125 (477)
T KOG2467|consen 50 NFTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLD---PEKWGV-NVQPYSGSPANFAVYTA 125 (477)
T ss_pred cchHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCC---HHHCce-eeccCCCCchhhHHHhh
Confidence 3567788888765 322223344332 13234554443332 2322 112233 46788888887777777
Q ss_pred HhhhCCCCeEEEcCCCCcchHH-----HHHhcCc-----eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 138 QKRFHPDSQIYIPVPTWSNHHN-----IWRDAHV-----TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 138 l~~~~pgd~Vlv~~P~y~~y~~-----~~~~~G~-----~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
+.. |+|.+.=.+---.++.. --+..-+ +-.+|.+ ++++.-+|.|.|++....- ++.++| |
T Consensus 126 ll~--Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv-~~~TG~IDYD~Le~~A~~f--rPk~ii-a---- 195 (477)
T KOG2467|consen 126 LLK--PHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKV-DPSTGYIDYDKLEKTATLF--RPKLII-A---- 195 (477)
T ss_pred hcC--CCCeeeeccCCCCCccccccccCCceeeeeeeecccCceee-CCCCCceehHHHHHHHHhc--CCcEEE-e----
Confidence 766 99888755433333321 0011111 1122333 3456778999999876543 334444 3
Q ss_pred CCCCCCCH-HHHHHHHHHHHhcCceeEEcccCC
Q 047180 208 PTGVDPSE-EQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 208 PTG~~~s~-~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
-+..|++ -+..++-++|.+.+.+++.|.++.
T Consensus 196 -G~SaY~R~~DYaR~R~Iad~~gA~Lm~DMAHI 227 (477)
T KOG2467|consen 196 -GTSAYSRLIDYARFRKIADKVGAYLMADMAHI 227 (477)
T ss_pred -ccccchhhccHHHHHHHHHhcCceeehhhhhH
Confidence 2334444 356677788889999999999873
No 391
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=78.85 E-value=4.8 Score=37.99 Aligned_cols=70 Identities=7% Similarity=0.002 Sum_probs=45.4
Q ss_pred HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 158 HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 158 ~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
...+...+.++.+..+.+.+.|.+....+.+ ++..... .....+.|-.||++|+++|++.|++++|-||-
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~-lt~~ga~------~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPK-LTEIGGS------TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCccc-ccccccc------cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 3444556777777777665556655444432 2211110 12235667889999999999999999998886
No 392
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=76.29 E-value=12 Score=29.98 Aligned_cols=59 Identities=10% Similarity=0.144 Sum_probs=43.7
Q ss_pred ceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCC---CCCCCCCCCCHHHHHHHHHHHHhcC
Q 047180 166 VTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHAC---AHNPTGVDPSEEQWKEISYQIKAKG 229 (337)
Q Consensus 166 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~---p~NPTG~~~s~~~~~~l~~~~~~~~ 229 (337)
.+++.+|+ ...+|++.+.+++.+- ...++|+-|. +|..+|..+.+.+++.+-++.++.|
T Consensus 29 vriIrvpC----~Grv~~~~il~Af~~G-ADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 29 VRIIRVPC----SGRVDPEFILRAFEKG-ADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred eEEEEccC----CCccCHHHHHHHHHcC-CCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 56777777 3679999999999853 3345554444 4668999999999998888887755
No 393
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=73.27 E-value=9.6 Score=35.43 Aligned_cols=68 Identities=10% Similarity=0.042 Sum_probs=43.7
Q ss_pred HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 159 NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 159 ~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
..+...+.++....+.+.+.|.+....+.+ +...... .++ .+.|-.||++|+++|++.|+++|+-||-
T Consensus 23 d~ma~~K~N~lhlHl~D~~~~~le~~~~p~-l~~~g~~------~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 23 DVLARYKINTFHWHLTDDQAWRIESKKFPE-LAEKGGQ------INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHhCCcEEEEeeecCCCceEeeCccch-hhhhccc------ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 344566777777777665556665444433 2211111 112 3446689999999999999999998875
No 394
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=66.88 E-value=12 Score=35.01 Aligned_cols=62 Identities=10% Similarity=0.113 Sum_probs=39.7
Q ss_pred HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 159 NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 159 ~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
..+...+.++....+.+.+.|.+....+-+ +.. .. ..|-.||++++++|++.|+++||-||-
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~-lt~--~g-----------~~~~~yT~~di~elv~yA~~rgI~vIP 86 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPK-LQQ--KA-----------SDGLYYTQEQIREVVAYARDRGIRVVP 86 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCcc-ccc--cC-----------CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 344556677777776555455554333222 111 01 135679999999999999999988775
No 395
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=65.59 E-value=14 Score=35.16 Aligned_cols=65 Identities=12% Similarity=0.086 Sum_probs=43.4
Q ss_pred HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 159 NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 159 ~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
..+...+.++.+..+.+.+.|.+....+.+ ++.. . ...+|-.||++|+++|++.|++++|-||--
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~-Lt~~--g---------a~~~~~~YT~~di~eiv~yA~~rgI~vIPE 89 (348)
T cd06562 25 DAMAYNKLNVLHWHITDSQSFPLESPSYPE-LSKK--G---------AYSPSEVYTPEDVKEIVEYARLRGIRVIPE 89 (348)
T ss_pred HHHHHhCCcEEEEeEEcCCCceEeeCCCch-hhhc--c---------CcCCCceECHHHHHHHHHHHHHcCCEEEEe
Confidence 344556677777777665566666554443 3211 1 012467899999999999999999988863
No 396
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=62.97 E-value=11 Score=35.53 Aligned_cols=68 Identities=10% Similarity=0.009 Sum_probs=41.8
Q ss_pred HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 159 NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 159 ~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
..+...+.+.....+.+.+.|.+....+.+.-.. .. -+++.+ |-.||++++++|++.|+++||-||--
T Consensus 25 d~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~-ga-------~~~~~~-~~~yT~~di~~lv~yA~~~gI~VIPe 92 (351)
T PF00728_consen 25 DQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEK-GA-------YRPSDA-GGYYTKEDIRELVAYAKERGIEVIPE 92 (351)
T ss_dssp HHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHT-TT-------ESTTCT-ESEBEHHHHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHcCCcEEEEEEecCCCCccccCCCcccccc-Cc-------cccccc-cccCCHHHHHHHHHHHHHcCCceeee
Confidence 3445677777888776665666655444332221 00 011224 44999999999999999999888763
No 397
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=60.10 E-value=1.1e+02 Score=26.64 Aligned_cols=87 Identities=14% Similarity=0.019 Sum_probs=49.1
Q ss_pred hhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCC
Q 047180 128 TGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAH 206 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~ 206 (337)
..+-.++-.++. ++ ...++..+.=..-...++..|.+++...+ -|.+.|.++++. -. .++++..++
T Consensus 9 ~~G~~v~~~L~~---~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-------~~~~~l~~al~g--~d-~v~~~~~~~ 75 (233)
T PF05368_consen 9 NQGRSVVRALLS---AGFSVRALVRDPSSDRAQQLQALGAEVVEADY-------DDPESLVAALKG--VD-AVFSVTPPS 75 (233)
T ss_dssp HHHHHHHHHHHH---TTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-------T-HHHHHHHHTT--CS-EEEEESSCS
T ss_pred HHHHHHHHHHHh---CCCCcEEEEeccchhhhhhhhcccceEeeccc-------CCHHHHHHHHcC--Cc-eEEeecCcc
Confidence 344444434443 34 45555555533344566778998886644 267999999973 23 344433333
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCce
Q 047180 207 NPTGVDPSEEQWKEISYQIKAKGHF 231 (337)
Q Consensus 207 NPTG~~~s~~~~~~l~~~~~~~~~~ 231 (337)
+ .-..+.-..|++.|++.++=
T Consensus 76 ~----~~~~~~~~~li~Aa~~agVk 96 (233)
T PF05368_consen 76 H----PSELEQQKNLIDAAKAAGVK 96 (233)
T ss_dssp C----CCHHHHHHHHHHHHHHHT-S
T ss_pred h----hhhhhhhhhHHHhhhccccc
Confidence 3 33456778899999887643
No 398
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=59.44 E-value=26 Score=34.52 Aligned_cols=27 Identities=19% Similarity=-0.082 Sum_probs=23.9
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
+.|-.||++|+++|++.|++++|-||-
T Consensus 89 ~~~g~YT~~di~eiv~yA~~rgI~VIP 115 (445)
T cd06569 89 SGSGYYSRADYIEILKYAKARHIEVIP 115 (445)
T ss_pred ccCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 456789999999999999999998875
No 399
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=59.08 E-value=72 Score=29.79 Aligned_cols=167 Identities=13% Similarity=0.089 Sum_probs=88.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH-Hh------cCc-----eeeEe-eeccC--CCCC-----
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW-RD------AHV-----TQRTF-HYYHP--GTKG----- 180 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~-~~------~G~-----~~~~~-~~~~~--~~~~----- 180 (337)
.+.+++|++|-.+++++..++..-..|++.+-.|.++.+.. +. .|. +.+.+ |+.+- ..+.
T Consensus 105 c~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~ 184 (452)
T KOG1403|consen 105 CFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYP 184 (452)
T ss_pred EEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCC
Confidence 67899999999999988776654445555566666654322 10 111 12222 22110 0000
Q ss_pred -CC-----hHHHHHHHHcC---CCCeEEEEeCCCCCCCCCCCCH-HHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 181 -LD-----FAALMDDIKNA---PNGSFFLLHACAHNPTGVDPSE-EQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 181 -~d-----~~~l~~~l~~~---~~~~~ili~~~p~NPTG~~~s~-~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
-| .+.+++.+.+. ......++--+-+.=-|.++++ .-.+++++..+.++-+.|.||+--+|.. .-...
T Consensus 185 ~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGR--vG~hy 262 (452)
T KOG1403|consen 185 DADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGR--VGSHY 262 (452)
T ss_pred cccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccc--cchhh
Confidence 01 12233322221 1111222212223335666554 4567888888889999999999877742 11234
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
|+...+. .-+. +-++.|.+| .|.-++.++. .+++.+.|.
T Consensus 263 Wafq~y~-fiPD---IVtmgKpmG-NGhPVa~Vat---tkeIA~Af~ 301 (452)
T KOG1403|consen 263 WAFQTYN-FIPD---IVTMGKPMG-NGHPVAAVAT---TKEIAQAFH 301 (452)
T ss_pred hhhhhhc-cccc---hheecccCC-CCCeeeEEec---cHHHHHHhc
Confidence 4433221 1112 335789999 7999998763 455555543
No 400
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=57.49 E-value=79 Score=23.69 Aligned_cols=71 Identities=11% Similarity=0.006 Sum_probs=45.9
Q ss_pred CCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCce
Q 047180 152 PTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHF 231 (337)
Q Consensus 152 P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ 231 (337)
-....|...++..|++.+.+ . ....+.-....+++.+. ...+||+..+. .+-+-...+-+.|+++++.
T Consensus 10 ~~~~~~~~~~~~~G~~~~~h-g-~~~~~~~~~~~l~~~i~---~aD~VIv~t~~-------vsH~~~~~vk~~akk~~ip 77 (97)
T PF10087_consen 10 DRERRYKRILEKYGGKLIHH-G-RDGGDEKKASRLPSKIK---KADLVIVFTDY-------VSHNAMWKVKKAAKKYGIP 77 (97)
T ss_pred ccHHHHHHHHHHcCCEEEEE-e-cCCCCccchhHHHHhcC---CCCEEEEEeCC-------cChHHHHHHHHHHHHcCCc
Confidence 45567888999999998877 3 22122222234666664 23455554432 5677888899999999887
Q ss_pred eEE
Q 047180 232 PFF 234 (337)
Q Consensus 232 ii~ 234 (337)
++.
T Consensus 78 ~~~ 80 (97)
T PF10087_consen 78 IIY 80 (97)
T ss_pred EEE
Confidence 664
No 401
>PF04019 DUF359: Protein of unknown function (DUF359); InterPro: IPR007164 This is family of archaebacterial proteins, which are about 170 amino acids in length. They have no known function. The most conserved portion of the protein contains the sequence GEEDL that may be important for its function.
Probab=53.13 E-value=1.1e+02 Score=24.31 Aligned_cols=76 Identities=24% Similarity=0.256 Sum_probs=43.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHHh-cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeE
Q 047180 206 HNPTGVDPSEEQWKEISYQIKA-KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~-~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
.||-|. +|.+-|+.|.+.+.+ ....|++| .++|...+....-.....+++ ||-|| -|.++
T Consensus 40 ~NPpG~-It~el~~ai~~a~~~~~~~~I~V~----------GEEDL~~lPail~aP~gs~V~------YGQP~--eGvV~ 100 (121)
T PF04019_consen 40 KNPPGT-ITEELIEAIKKALESGKPVVIFVD----------GEEDLAVLPAILYAPEGSVVL------YGQPG--EGVVL 100 (121)
T ss_pred ECCCCc-ccHHHHHHHHHHHhCCCCEEEEEe----------ChHHHHHHHHHHhCCCCCEEE------ECCCC--CeEEE
Confidence 788887 788889988888744 45666665 234433333221112234444 66787 46555
Q ss_pred eeeCCHHHHHHHHHHHH
Q 047180 285 VLCEDEKQAVAVKSQLQ 301 (337)
Q Consensus 285 ~~~~~~~~~~~~~~~l~ 301 (337)
+. -+++...++.+-|+
T Consensus 101 v~-v~~~~k~~~~~ll~ 116 (121)
T PF04019_consen 101 VK-VTEEAKRRARELLK 116 (121)
T ss_pred EE-eCHHHHHHHHHHHH
Confidence 53 46666565555444
No 402
>cd07476 Peptidases_S8_thiazoline_oxidase_subtilisin-like_protease Peptidase S8 family domain in Thiazoline oxidase/subtilisin-like proteases. Thiazoline oxidase/subtilisin-like protease is produced by the symbiotic bacteria Prochloron spp. that inhabit didemnid family ascidians. The cyclic peptides of the patellamide class found in didemnid extracts are now known to be synthesized by the Prochloron spp. The prepatellamide is heterocyclized to form thiazole and oxazoline rings and the peptide is cleaved to form the two cyclic patellamides A and C. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution).
Probab=52.50 E-value=41 Score=30.54 Aligned_cols=70 Identities=7% Similarity=0.012 Sum_probs=38.2
Q ss_pred CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 165 HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 165 G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
++++..++.......+.+.+.+.+++...-...+=|+|+|-..++-.......+++.++.+.++++++|.
T Consensus 74 ~a~i~~~~v~~~~~~~~~~~~i~~ai~~a~~~g~~VIN~S~G~~~~~~~~~~~l~~a~~~a~~~gvlvv~ 143 (267)
T cd07476 74 LCRGLNIPIFAEDRRGCSQLDLARAINLALEQGAHIINISGGRLTQTGEADPILANAVAMCQQNNVLIVA 143 (267)
T ss_pred CCeEEEEEEEeCCCCCCCHHHHHHHHHHHHHCCCCEEEecCCcCCCCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 3455555553332334444444444432211123345566544443334456788888889999998887
No 403
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=51.65 E-value=16 Score=34.89 Aligned_cols=29 Identities=21% Similarity=0.137 Sum_probs=25.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
+.|.|-.||++|+++|++.|++++|-||-
T Consensus 76 ~~~~~~~YT~~di~eiv~yA~~rgI~VIP 104 (357)
T cd06563 76 GTPYGGFYTQEEIREIVAYAAERGITVIP 104 (357)
T ss_pred CCccCceECHHHHHHHHHHHHHcCCEEEE
Confidence 34567889999999999999999988775
No 404
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=47.75 E-value=1.9e+02 Score=25.14 Aligned_cols=96 Identities=15% Similarity=0.143 Sum_probs=53.8
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEE
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFL 200 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~il 200 (337)
++++.||..|..-+-.++. .|-.|.+.+|....-...+...| ++..+. . .+ +.+ .+. ...++
T Consensus 12 vlVvGgG~va~rk~~~Ll~---~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~---~-~~--~~~----dl~----~~~lV 73 (205)
T TIGR01470 12 VLVVGGGDVALRKARLLLK---AGAQLRVIAEELESELTLLAEQG-GITWLA---R-CF--DAD----ILE----GAFLV 73 (205)
T ss_pred EEEECcCHHHHHHHHHHHH---CCCEEEEEcCCCCHHHHHHHHcC-CEEEEe---C-CC--CHH----HhC----CcEEE
Confidence 5677888888877765554 47788888887764444444444 333221 1 12 222 132 23344
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCcee-EEcc-cCCCCC
Q 047180 201 LHACAHNPTGVDPSEEQWKEISYQIKAKGHFP-FFDM-AYQGFA 242 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~i-i~De-~Y~~~~ 242 (337)
+ ..+++| +-=+++++.|+++++++ +.|+ .+.+|.
T Consensus 74 i-~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e~~~f~ 109 (205)
T TIGR01470 74 I-AATDDE-------ELNRRVAHAARARGVPVNVVDDPELCSFI 109 (205)
T ss_pred E-ECCCCH-------HHHHHHHHHHHHcCCEEEECCCcccCeEE
Confidence 4 345554 23357899999999877 3444 334443
No 405
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=47.65 E-value=35 Score=32.28 Aligned_cols=92 Identities=17% Similarity=0.257 Sum_probs=57.0
Q ss_pred HHHHHHHHHhhhC-CCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 130 ACRLFADFQKRFH-PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 130 al~~~~~~l~~~~-pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
.+..+..+..+++ | ..-.|+.|...++....+++.++...+..+ +-...++.. .+-+++ --|
T Consensus 42 s~~~A~~fAq~~~~~------~~k~y~syEeLakd~~vDvVyi~~~~~qH~----evv~l~l~~---~K~VL~----EKP 104 (351)
T KOG2741|consen 42 SLERAKEFAQRHNIP------NPKAYGSYEELAKDPEVDVVYISTPNPQHY----EVVMLALNK---GKHVLC----EKP 104 (351)
T ss_pred cHHHHHHHHHhcCCC------CCccccCHHHHhcCCCcCEEEeCCCCccHH----HHHHHHHHc---CCcEEe----ccc
Confidence 5555554444432 2 244689999999998888888877443222 333333432 233444 444
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
. +++.+|.++|++.|+++++.+. |-.+..+
T Consensus 105 l--a~n~~e~~~iveaA~~rgv~~m-eg~~~R~ 134 (351)
T KOG2741|consen 105 L--AMNVAEAEEIVEAAEARGVFFM-EGLWWRF 134 (351)
T ss_pred c--cCCHHHHHHHHHHHHHcCcEEE-eeeeeec
Confidence 4 5688999999999999995544 4444444
No 406
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=46.99 E-value=19 Score=24.89 Aligned_cols=34 Identities=24% Similarity=0.362 Sum_probs=23.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccC
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAY 238 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y 238 (337)
|..|+|..+|.+++++.++-..+.+.+.+.+..|
T Consensus 25 ~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 25 PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp -GGG--TT--HHHHHHHHHHHHHTTSEE--TTEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEE
Confidence 4677999999999999999888888888777666
No 407
>cd06564 GH20_DspB_LnbB-like Glycosyl hydrolase family 20 (GH20) catalytic domain of dispersin B (DspB), lacto-N-biosidase (LnbB) and related proteins. Dispersin B is a soluble beta-N-acetylglucosamidase found in bacteria that hydrolyzes the beta-1,6-linkages of PGA (poly-beta-(1,6)-N-acetylglucosamine), a major component of the extracellular polysaccharide matrix. Lacto-N-biosidase hydrolyzes lacto-N-biose (LNB) type I oligosaccharides at the nonreducing terminus to produce lacto-N-biose as part of the GNB/LNB (galacto-N-biose/lacto-N-biose I) degradation pathway. The lacto-N-biosidase from Bifidobacterium bifidum has this GH20 domain, a carbohydrate binding module 32, and a bacterial immunoglobulin-like domain 2, as well as a YSIRK signal peptide and a G5 membrane anchor at the N and C termini, respectively. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=46.81 E-value=21 Score=33.49 Aligned_cols=27 Identities=19% Similarity=0.102 Sum_probs=23.9
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
+.|-.||++|+++|++.|++++|-||-
T Consensus 74 ~~~~~YT~~di~eiv~yA~~rgI~vIP 100 (326)
T cd06564 74 ANDGYYTKEEFKELIAYAKDRGVNIIP 100 (326)
T ss_pred CCCCcccHHHHHHHHHHHHHcCCeEec
Confidence 457789999999999999999988775
No 408
>PF00218 IGPS: Indole-3-glycerol phosphate synthase; InterPro: IPR013798 Indole-3-glycerol phosphate synthase (4.1.1.48 from EC) (IGPS) catalyses the fourth step in the biosynthesis of tryptophan, the ring closure of 1-(2-carboxy-phenylamino)-1-deoxyribulose into indol-3-glycerol-phosphate. In some bacteria, IGPS is a single chain enzyme. In others, such as Escherichia coli, it is the N-terminal domain of a bifunctional enzyme that also catalyses N-(5'-phosphoribosyl)anthranilate isomerase (5.3.1.24 from EC) (PRAI) activity (see IPR001240 from INTERPRO), the third step of tryptophan biosynthesis. In fungi, IGPS is the central domain of a trifunctional enzyme that contains a PRAI C-terminal domain and a glutamine amidotransferase (2.4.2 from EC) (GATase) N-terminal domain (see IPR000991 from INTERPRO). A structure of the IGPS domain of the bifunctional enzyme from the mesophilic bacterium E. coli (eIGPS) has been compared with the monomeric indole-3-glycerol phosphate synthase from the hyperthermophilic archaeon Sulfolobus solfataricus (sIGPS). Both are single-domain (beta/alpha)8 barrel proteins, with one (eIGPS) or two (sIGPS) additional helices inserted before the first beta strand []. ; GO: 0004425 indole-3-glycerol-phosphate synthase activity; PDB: 1VC4_A 1PII_A 1JCM_P 1I4N_B 1J5T_A 3TSM_B 4FB7_A 3QJA_A 1JUL_A 2C3Z_A ....
Probab=46.16 E-value=47 Score=30.13 Aligned_cols=78 Identities=12% Similarity=0.026 Sum_probs=47.5
Q ss_pred eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 146 QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 146 ~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
-|++....|.+....++..- +.+.+|+.. ++|-+|+.++.++-.. .. ..++++. .+++.++++++.+.|
T Consensus 86 SVlTe~~~F~Gs~~dL~~v~-~~~~~PvL~-KDFIid~~QI~eA~~~-GA-DaVLLI~-------~~L~~~~l~~l~~~a 154 (254)
T PF00218_consen 86 SVLTEPKFFGGSLEDLRAVR-KAVDLPVLR-KDFIIDPYQIYEARAA-GA-DAVLLIA-------AILSDDQLEELLELA 154 (254)
T ss_dssp EEE--SCCCHHHHHHHHHHH-HHSSS-EEE-ES---SHHHHHHHHHT-T--SEEEEEG-------GGSGHHHHHHHHHHH
T ss_pred EEECCCCCCCCCHHHHHHHH-HHhCCCccc-ccCCCCHHHHHHHHHc-CC-CEeehhH-------HhCCHHHHHHHHHHH
Confidence 45555666777665555432 234566644 3799999998877553 33 3444433 469999999999999
Q ss_pred HhcCceeEE
Q 047180 226 KAKGHFPFF 234 (337)
Q Consensus 226 ~~~~~~ii~ 234 (337)
++.|+-+++
T Consensus 155 ~~lGle~lV 163 (254)
T PF00218_consen 155 HSLGLEALV 163 (254)
T ss_dssp HHTT-EEEE
T ss_pred HHcCCCeEE
Confidence 999988777
No 409
>smart00642 Aamy Alpha-amylase domain.
Probab=44.85 E-value=31 Score=28.98 Aligned_cols=28 Identities=21% Similarity=0.278 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
+.++++++++-|+++++-||.|-+....
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 4699999999999999999999887654
No 410
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=44.77 E-value=1.4e+02 Score=27.85 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=46.6
Q ss_pred CCCCCCCHHHHHHHHHHHh----CCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCC--CeEEEcCCCCcchHHHHH
Q 047180 89 YLPMGGSVKMVEETLKLAY----GDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPD--SQIYIPVPTWSNHHNIWR 162 (337)
Q Consensus 89 Y~~~~G~~~lr~aia~~~~----~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg--d~Vlv~~P~y~~y~~~~~ 162 (337)
|.|. | +.++.+|.++. .++ .+.+... ++-..+|+-++.+++.+-. .| =.+++|+-.-.....+++
T Consensus 35 ~NP~-g--SvKDR~A~~mI~~Ae~~G--~l~pG~t-IVE~TSGNTGI~LA~vaa~---~Gy~~iivmP~~~S~er~~~l~ 105 (300)
T COG0031 35 FNPG-G--SVKDRIALYMIEDAEKRG--LLKPGGT-IVEATSGNTGIALAMVAAA---KGYRLIIVMPETMSQERRKLLR 105 (300)
T ss_pred cCCC-C--chhHHHHHHHHHHHHHcC--CCCCCCE-EEEcCCChHHHHHHHHHHH---cCCcEEEEeCCCCCHHHHHHHH
Confidence 4453 4 45666665542 222 1455554 4556677777777664433 35 355556656666788999
Q ss_pred hcCceeeEeee
Q 047180 163 DAHVTQRTFHY 173 (337)
Q Consensus 163 ~~G~~~~~~~~ 173 (337)
..|++++.+|-
T Consensus 106 a~GAevi~t~~ 116 (300)
T COG0031 106 ALGAEVILTPG 116 (300)
T ss_pred HcCCEEEEcCC
Confidence 99999998875
No 411
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=44.29 E-value=1.4e+02 Score=27.33 Aligned_cols=79 Identities=15% Similarity=0.087 Sum_probs=43.0
Q ss_pred hHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 129 GACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 129 ~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
+++.++-.+ .+ -| |.|++..|.|....+ .++ .+.+++..+.. +.++++. ++|.
T Consensus 87 ~ai~~a~~a-~~--~Gad~v~v~~P~y~~~~~-------------------~~l-~~~f~~va~a~-~lPv~iY-n~P~- 140 (293)
T PRK04147 87 EAQELAKYA-TE--LGYDAISAVTPFYYPFSF-------------------EEI-CDYYREIIDSA-DNPMIVY-NIPA- 140 (293)
T ss_pred HHHHHHHHH-HH--cCCCEEEEeCCcCCCCCH-------------------HHH-HHHHHHHHHhC-CCCEEEE-eCch-
Confidence 555554333 23 34 889999888754321 000 12233323222 2345554 3332
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
.||..++.+.+++|++ -.+++=|=|.
T Consensus 141 ~tg~~l~~~~l~~L~~---~pnvvgiK~s 166 (293)
T PRK04147 141 LTGVNLSLDQFNELFT---LPKVIGVKQT 166 (293)
T ss_pred hhccCCCHHHHHHHhc---CCCEEEEEeC
Confidence 3899999999888764 2466666664
No 412
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=43.51 E-value=3.2e+02 Score=26.53 Aligned_cols=38 Identities=5% Similarity=0.180 Sum_probs=24.0
Q ss_pred EEeeccchhHH-HHHHHHHhh------hCCCCeEEEcCCCCcchH
Q 047180 121 AVQSLSGTGAC-RLFADFQKR------FHPDSQIYIPVPTWSNHH 158 (337)
Q Consensus 121 ~~~t~g~~~al-~~~~~~l~~------~~pgd~Vlv~~P~y~~y~ 158 (337)
++++.|+++.. ..+.+.... +.+||.|++..|.+|++.
T Consensus 289 vii~tg~~g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~ 333 (422)
T TIGR00649 289 LIITTGSQGEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNE 333 (422)
T ss_pred EEEEeCCCCcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHH
Confidence 45666766544 333343321 126799999999999877
No 413
>PRK08265 short chain dehydrogenase; Provisional
Probab=43.10 E-value=2.4e+02 Score=24.95 Aligned_cols=95 Identities=13% Similarity=-0.012 Sum_probs=43.5
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
+++.|+++++-.. +..|.+ .|-.|++.+-.-.......+..+.++..++++ --|.+.+.+.+... -.+.
T Consensus 9 vlItGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----l~~~~~~~~~~~~~~~~~g~i 81 (261)
T PRK08265 9 AIVTGGATLIGAAVARALVA--AGARVAIVDIDADNGAAVAASLGERARFIATD-----ITDDAAIERAVATVVARFGRV 81 (261)
T ss_pred EEEECCCChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCeeEEEEec-----CCCHHHHHHHHHHHHHHhCCC
Confidence 3445555554433 344444 58777776543222333444445555555542 12344444433321 1122
Q ss_pred EEEEeCCC-CCCCCCCCCHHHHHHHHH
Q 047180 198 FFLLHACA-HNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p-~NPTG~~~s~~~~~~l~~ 223 (337)
-++++|-. ..+.+...+.++|++..+
T Consensus 82 d~lv~~ag~~~~~~~~~~~~~~~~~~~ 108 (261)
T PRK08265 82 DILVNLACTYLDDGLASSRADWLAALD 108 (261)
T ss_pred CEEEECCCCCCCCcCcCCHHHHHHHHh
Confidence 24443321 223344567777766544
No 414
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=43.10 E-value=2.8e+02 Score=25.76 Aligned_cols=81 Identities=10% Similarity=0.076 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCC
Q 047180 128 TGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAH 206 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~ 206 (337)
.+++.++-.+- + -| |.|++..|.|..... .++ .+.+++..+..+.-++++. ++|
T Consensus 90 ~~ai~~a~~A~-~--~Gad~vlv~~P~y~~~~~-------------------~~l-~~yf~~va~a~~~lPv~iY-n~P- 144 (309)
T cd00952 90 RDTIARTRALL-D--LGADGTMLGRPMWLPLDV-------------------DTA-VQFYRDVAEAVPEMAIAIY-ANP- 144 (309)
T ss_pred HHHHHHHHHHH-H--hCCCEEEECCCcCCCCCH-------------------HHH-HHHHHHHHHhCCCCcEEEE-cCc-
Confidence 46666654443 3 35 899999998743310 000 1223332322212345554 333
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 207 NPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 207 NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
.-||..++.+.+++|++ -.++.=|=|.
T Consensus 145 ~~tg~~l~~~~l~~L~~---~pnivgiKds 171 (309)
T cd00952 145 EAFKFDFPRAAWAELAQ---IPQVVAAKYL 171 (309)
T ss_pred hhcCCCCCHHHHHHHhc---CCCEEEEEec
Confidence 33899999998887753 2355555554
No 415
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=42.93 E-value=69 Score=30.59 Aligned_cols=30 Identities=17% Similarity=0.144 Sum_probs=26.9
Q ss_pred CCCHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 212 DPSEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 212 ~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
-.|++..++|-+++++|++..|+||+-.+-
T Consensus 288 haSp~Ff~kLrdi~~Kh~v~fivDEVQTGg 317 (484)
T KOG1405|consen 288 HASPDFFRKLRDITKKHGVAFIVDEVQTGG 317 (484)
T ss_pred cCCHHHHHHHHHHHHhcCeEEEeeeeecCC
Confidence 479999999999999999999999987553
No 416
>TIGR03793 TOMM_pelo TOMM propeptide domain. This model represents a domain that is conserved among a large number of putative thiazole/oxazole-modified microcins (TOMM). Oddly, most of this seqence region appears homologous to nitrile hydratase subunits. This family is expanded especially in Pelotomaculum thermopropionicum SI.
Probab=41.86 E-value=44 Score=24.33 Aligned_cols=17 Identities=24% Similarity=0.395 Sum_probs=15.2
Q ss_pred CCCCCCCCCCHHHHHHHH
Q 047180 205 AHNPTGVDPSEEQWKEIS 222 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~ 222 (337)
|.+|.| -+|.++|..++
T Consensus 59 P~~P~~-~lse~~L~~va 75 (77)
T TIGR03793 59 PVNPDI-ELTDEQLDAVA 75 (77)
T ss_pred cCCCCC-CCCHHHHHHhh
Confidence 799999 99999998775
No 417
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=41.52 E-value=30 Score=35.58 Aligned_cols=36 Identities=14% Similarity=0.216 Sum_probs=30.1
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 204 CAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 204 ~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+|++|+| +.++++++++-|.++|+-||.|-+|....
T Consensus 220 ~p~~~~~---~~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 220 NPYDPAT---RIRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred CCCccch---HHHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 4666665 36899999999999999999999997653
No 418
>PLN02970 serine racemase
Probab=41.21 E-value=1.6e+02 Score=27.64 Aligned_cols=51 Identities=14% Similarity=-0.081 Sum_probs=33.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
++...+|+.++.+++.+- ...-.-+|++|.-+.+.-...++..|++++.++
T Consensus 78 vv~aSsGN~g~alA~~a~-~~G~~~~ivvp~~~~~~k~~~~~~~GA~Vi~~~ 128 (328)
T PLN02970 78 VVTHSSGNHAAALALAAK-LRGIPAYIVVPKNAPACKVDAVIRYGGIITWCE 128 (328)
T ss_pred EEEECCcHHHHHHHHHHH-HcCCCEEEEECCCCCHHHHHHHHhcCCEEEEeC
Confidence 345567777777665332 211224777777666666778899999998775
No 419
>PRK09778 putative antitoxin of the YafO-YafN toxin-antitoxin system; Provisional
Probab=40.40 E-value=24 Score=26.74 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=25.0
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK 228 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~ 228 (337)
.++.|+| -|-|.|.+.+.+.++++++.+.+.
T Consensus 26 ~PVAILN--hN~PafY~Vpa~~yE~m~e~LeD~ 56 (97)
T PRK09778 26 QPVAVLS--NNRPAGYLLSASAFEALMDMLAEQ 56 (97)
T ss_pred CceEEec--CCceeEEEeCHHHHHHHHHHHHhH
Confidence 3566663 488999999999999999988754
No 420
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=40.05 E-value=1.8e+02 Score=25.79 Aligned_cols=70 Identities=13% Similarity=0.119 Sum_probs=47.5
Q ss_pred HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC---CCCCCCHHHHHHHHHHHHhcCceeE
Q 047180 158 HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP---TGVDPSEEQWKEISYQIKAKGHFPF 233 (337)
Q Consensus 158 ~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP---TG~~~s~~~~~~l~~~~~~~~~~ii 233 (337)
...++.+|.+++. |+ |+.|.+++...+-...-..+|+=....-=| -|..++++.+++|..+.+++++-+.
T Consensus 105 e~lc~~lGl~~~~-PL-----Wg~d~~ell~e~~~~Gf~~~Iv~Vsa~gL~~~~lGr~i~~~~~e~l~~l~~~ygi~~~ 177 (223)
T COG2102 105 ERLCEELGLKVYA-PL-----WGRDPEELLEEMVEAGFEAIIVAVSAEGLDESWLGRRIDREFLEELKSLNRRYGIHPA 177 (223)
T ss_pred HHHHHHhCCEEee-cc-----cCCCHHHHHHHHHHcCCeEEEEEEeccCCChHHhCCccCHHHHHHHHHHHHhcCCCcc
Confidence 4577888887653 55 788888877766543222233322333334 7899999999999999999987543
No 421
>COG1909 Uncharacterized protein conserved in archaea [Function unknown]
Probab=39.37 E-value=2.1e+02 Score=24.11 Aligned_cols=77 Identities=21% Similarity=0.170 Sum_probs=42.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcC-ceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeE
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKG-HFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~-~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
.||-|. +|.+-|+.|.+.+...+ +.|++| .++|...+....-.....+++ ||.||. |.++
T Consensus 85 ~NpPGt-It~el~~ai~~a~~~~k~~~I~V~----------GEEDLa~lp~i~~ap~~tvV~------YGqP~~--GvV~ 145 (167)
T COG1909 85 RNPPGT-ITFELIKAIEKALEDGKRVRIFVD----------GEEDLAVLPAILYAPLGTVVL------YGQPDE--GVVA 145 (167)
T ss_pred eCCCcE-eEHHHHHHHHHHHhcCCcEEEEEe----------ChhHHHHhHHHhhcCCCCEEE------eCCCCC--cEEE
Confidence 789997 68999999998877643 444444 223432232211112345665 567885 4333
Q ss_pred eeeCCHHHHHHHHHHHHh
Q 047180 285 VLCEDEKQAVAVKSQLQQ 302 (337)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~ 302 (337)
.. -+.+....+.+-|++
T Consensus 146 l~-V~~~~k~~v~~ll~k 162 (167)
T COG1909 146 LR-VTEELKEEVLELLAK 162 (167)
T ss_pred EE-ecHHHHHHHHHHHHH
Confidence 32 355555555554443
No 422
>COG0134 TrpC Indole-3-glycerol phosphate synthase [Amino acid transport and metabolism]
Probab=39.14 E-value=32 Score=31.11 Aligned_cols=78 Identities=10% Similarity=0.034 Sum_probs=50.7
Q ss_pred eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 146 QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 146 ~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
-|++..++|.+-...++.. ...+.+|+... +|-+|+.++.++-.. .. .+++++- .+++.+++++|++.|
T Consensus 84 SVLTd~~~F~Gs~e~L~~v-~~~v~~PvL~K-DFiiD~yQI~~Ar~~-GA-DavLLI~-------~~L~~~~l~el~~~A 152 (254)
T COG0134 84 SVLTDPKYFQGSFEDLRAV-RAAVDLPVLRK-DFIIDPYQIYEARAA-GA-DAVLLIV-------AALDDEQLEELVDRA 152 (254)
T ss_pred EEecCccccCCCHHHHHHH-HHhcCCCeeec-cCCCCHHHHHHHHHc-Cc-ccHHHHH-------HhcCHHHHHHHHHHH
Confidence 4555555666555555433 23455666443 799999888876542 22 3333322 468999999999999
Q ss_pred HhcCceeEE
Q 047180 226 KAKGHFPFF 234 (337)
Q Consensus 226 ~~~~~~ii~ 234 (337)
++.|+-+++
T Consensus 153 ~~LGm~~LV 161 (254)
T COG0134 153 HELGMEVLV 161 (254)
T ss_pred HHcCCeeEE
Confidence 999987766
No 423
>PRK13957 indole-3-glycerol-phosphate synthase; Provisional
Probab=38.89 E-value=1.3e+02 Score=27.19 Aligned_cols=76 Identities=11% Similarity=-0.018 Sum_probs=50.3
Q ss_pred EEcCCC-CcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 047180 148 YIPVPT-WSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIK 226 (337)
Q Consensus 148 lv~~P~-y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~ 226 (337)
+..+|. |.+....++..- +.+.+|+... +|-+|..++.++... .. ..++++. ..++.++++++.+.|.
T Consensus 80 VlTe~~~F~Gs~~~l~~v~-~~v~~PvL~K-DFIid~~QI~ea~~~-GA-DavLLI~-------~~L~~~~l~~l~~~a~ 148 (247)
T PRK13957 80 VLTDQSYFGGSLEDLKSVS-SELKIPVLRK-DFILDEIQIREARAF-GA-SAILLIV-------RILTPSQIKSFLKHAS 148 (247)
T ss_pred EEcCCCcCCCCHHHHHHHH-HhcCCCEEec-cccCCHHHHHHHHHc-CC-CEEEeEH-------hhCCHHHHHHHHHHHH
Confidence 344454 444455554432 2345676544 788999999887652 33 3444433 4688899999999999
Q ss_pred hcCceeEE
Q 047180 227 AKGHFPFF 234 (337)
Q Consensus 227 ~~~~~ii~ 234 (337)
+.|+-+++
T Consensus 149 ~lGle~LV 156 (247)
T PRK13957 149 SLGMDVLV 156 (247)
T ss_pred HcCCceEE
Confidence 99987776
No 424
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=38.82 E-value=37 Score=32.28 Aligned_cols=34 Identities=21% Similarity=0.171 Sum_probs=23.0
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeE
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPF 233 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii 233 (337)
++..-+++|.|.+|+.++++++.+.++++|+.+-
T Consensus 29 iV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~ 62 (351)
T PF03786_consen 29 IVTALHDIPNGEVWDYEEIRALKERIEAAGLTLS 62 (351)
T ss_dssp EEE--SSS-TTS---HHHHHHHHHHHHCTT-EEE
T ss_pred eeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 3336689999999999999999999999986543
No 425
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=38.61 E-value=26 Score=31.69 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++.|.++|+-||.|-++....
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhhhccccccceEEEeeeccccc
Confidence 47999999999999999999999987654
No 426
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=37.43 E-value=3.5e+02 Score=25.32 Aligned_cols=87 Identities=14% Similarity=0.280 Sum_probs=50.4
Q ss_pred CCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCCh---HHHHHHHHc-CCCCeEEEEeCCCCCCCCCCCCHHHH
Q 047180 143 PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDF---AALMDDIKN-APNGSFFLLHACAHNPTGVDPSEEQW 218 (337)
Q Consensus 143 pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~---~~l~~~l~~-~~~~~~ili~~~p~NPTG~~~s~~~~ 218 (337)
+.+-|.+..++--+..-. ...+.+...+.. .+..++. +.|.+.+.. ..+..++++. -+=|.|. +.+..
T Consensus 77 ~~~fv~v~g~TRinvki~-~~~~~~~Tein~---~Gp~is~~~~~~~l~~~~~~l~~~d~Vvls--GSlP~g~--~~d~y 148 (310)
T COG1105 77 PDAFVEVKGDTRINVKIL-DEEDGEETEINF---PGPEISEAELEQFLEQLKALLESDDIVVLS--GSLPPGV--PPDAY 148 (310)
T ss_pred CceEEEccCCCeeeEEEE-ecCCCcEEEecC---CCCCCCHHHHHHHHHHHHHhcccCCEEEEe--CCCCCCC--CHHHH
Confidence 557777777776554211 111111222221 1233443 444444444 3344555553 4567774 78899
Q ss_pred HHHHHHHHhcCceeEEccc
Q 047180 219 KEISYQIKAKGHFPFFDMA 237 (337)
Q Consensus 219 ~~l~~~~~~~~~~ii~De~ 237 (337)
.+|++.|++.+..++.|-.
T Consensus 149 ~~li~~~~~~g~~vilD~S 167 (310)
T COG1105 149 AELIRILRQQGAKVILDTS 167 (310)
T ss_pred HHHHHHHHhcCCeEEEECC
Confidence 9999999999999999953
No 427
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=37.35 E-value=66 Score=29.64 Aligned_cols=80 Identities=13% Similarity=-0.033 Sum_probs=42.6
Q ss_pred hHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 129 GACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 129 ~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
+++.++-. ..+ -| |.|++..|.|..... ..+ .+.+.+..+..++.++++. |+|..
T Consensus 84 ~~i~la~~-a~~--~Gad~v~v~~P~y~~~~~------~~i--------------~~yf~~v~~~~~~lpv~lY-n~P~~ 139 (290)
T TIGR00683 84 EAVELGKY-ATE--LGYDCLSAVTPFYYKFSF------PEI--------------KHYYDTIIAETGGLNMIVY-SIPFL 139 (290)
T ss_pred HHHHHHHH-HHH--hCCCEEEEeCCcCCCCCH------HHH--------------HHHHHHHHhhCCCCCEEEE-eCccc
Confidence 45555433 333 34 889998888754311 001 1222222222223345544 33322
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
||..++.+.+++|++ ..+++=|=|.
T Consensus 140 -tg~~l~~~~i~~L~~---~pnv~giK~s 164 (290)
T TIGR00683 140 -TGVNMGIEQFGELYK---NPKVLGVKFT 164 (290)
T ss_pred -cccCcCHHHHHHHhc---CCCEEEEEeC
Confidence 899999999888874 2466666663
No 428
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=36.38 E-value=94 Score=21.55 Aligned_cols=23 Identities=13% Similarity=0.044 Sum_probs=18.7
Q ss_pred CC-HHHHHHHHHHHHhcCceeEEc
Q 047180 213 PS-EEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 213 ~s-~~~~~~l~~~~~~~~~~ii~D 235 (337)
++ .+++++|.+++++=|-++|.|
T Consensus 47 ~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 47 LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred CCchHHHHHHHHHHHcCCEEEEeC
Confidence 55 599999999999877777764
No 429
>PRK08638 threonine dehydratase; Validated
Probab=36.02 E-value=2e+02 Score=27.12 Aligned_cols=51 Identities=10% Similarity=-0.059 Sum_probs=32.8
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
++.+.+|+.++.+++.+-.. .=.-.|++|.-.-+.-...++..|++++.++
T Consensus 78 vv~~SsGN~g~alA~~aa~~-G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~ 128 (333)
T PRK08638 78 VVACSAGNHAQGVALSCALL-GIDGKVVMPKGAPKSKVAATCGYGAEVVLHG 128 (333)
T ss_pred EEEeCCcHHHHHHHHHHHHc-CCCEEEEeCCCCcHHHHHHHHHcCCEEEEEC
Confidence 45556677777776644321 1124666666555666778899999998764
No 430
>PF13684 Dak1_2: Dihydroxyacetone kinase family
Probab=35.98 E-value=97 Score=28.98 Aligned_cols=68 Identities=12% Similarity=0.070 Sum_probs=30.7
Q ss_pred hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 157 HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 157 y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
+...++.+|+..+ ++ ..++..+..+++.+++.+.+.+.++++ ||-.|.++. .++.++++++++ +.|.+
T Consensus 108 ~~~lf~~~Gv~~v-i~--ggqt~nPS~~dl~~Ai~~~~a~~VivL-PNn~ni~~a------a~qa~~~~~~~~-v~Vip 175 (313)
T PF13684_consen 108 LAELFRSLGVDVV-IS--GGQTMNPSTEDLLNAIEKVGADEVIVL-PNNKNIILA------AEQAARLSEDKN-VVVIP 175 (313)
T ss_pred HHHHHHhCCCeEE-Ee--CCCCCCCCHHHHHHHHHhCCCCeEEEE-eCCchHHHH------HHHHHHHhcCCC-EEEEe
Confidence 3555566665433 11 111233455667666665444334443 433333322 344555554445 33433
No 431
>PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function.; GO: 0016787 hydrolase activity; PDB: 2F46_A 3GXH_B 3GXG_B.
Probab=35.28 E-value=44 Score=26.06 Aligned_cols=50 Identities=8% Similarity=0.058 Sum_probs=24.9
Q ss_pred CC-CeEEEcCCC--------CcchHHHHHhcCceeeEeeeccCCCCCCC---hHHHHHHHHcCCC
Q 047180 143 PD-SQIYIPVPT--------WSNHHNIWRDAHVTQRTFHYYHPGTKGLD---FAALMDDIKNAPN 195 (337)
Q Consensus 143 pg-d~Vlv~~P~--------y~~y~~~~~~~G~~~~~~~~~~~~~~~~d---~~~l~~~l~~~~~ 195 (337)
.| ++|+.-.|. +......++.+|.+++.+|+... .++ ++.+.+.+...+.
T Consensus 26 ~GfktVInlRpd~E~~~qp~~~~~~~~a~~~Gl~y~~iPv~~~---~~~~~~v~~f~~~l~~~~~ 87 (110)
T PF04273_consen 26 QGFKTVINLRPDGEEPGQPSSAEEAAAAEALGLQYVHIPVDGG---AITEEDVEAFADALESLPK 87 (110)
T ss_dssp CT--EEEE-S-TTSTTT-T-HHCHHHHHHHCT-EEEE----TT---T--HHHHHHHHHHHHTTTT
T ss_pred CCCcEEEECCCCCCCCCCCCHHHHHHHHHHcCCeEEEeecCCC---CCCHHHHHHHHHHHHhCCC
Confidence 35 666665444 23344678899999999998432 343 4566666765543
No 432
>cd06449 ACCD Aminocyclopropane-1-carboxylate deaminase (ACCD): Pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of 1-aminocyclopropane-L-carboxylate (ACC), a precursor of the plant hormone ethylene, to alpha-ketobutyrate and ammonia.
Probab=34.63 E-value=2.6e+02 Score=25.80 Aligned_cols=16 Identities=13% Similarity=-0.076 Sum_probs=12.7
Q ss_pred hHHHHHhcCceeeEee
Q 047180 157 HHNIWRDAHVTQRTFH 172 (337)
Q Consensus 157 y~~~~~~~G~~~~~~~ 172 (337)
-...++..|++++.++
T Consensus 100 ~~~~~~~~Ga~v~~~~ 115 (307)
T cd06449 100 NILLSRIMGADVRLVS 115 (307)
T ss_pred cHHHHHHCCCEEEEEC
Confidence 3566789999998875
No 433
>COG4567 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain [Signal transduction mechanisms / Transcription]
Probab=34.12 E-value=1.3e+02 Score=25.27 Aligned_cols=94 Identities=7% Similarity=0.094 Sum_probs=53.3
Q ss_pred eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeC
Q 047180 124 SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHA 203 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~ 203 (337)
-.|+.+++..+.. +... ..|.=++.--+|.+...+++....-...|-. . --|.|.+..++......... .
T Consensus 62 kL~~gsGL~~i~~-lr~~-~~d~rivvLTGy~sIATAV~AvKlGA~~YLa-K----PAdaDdi~aAl~~~~~d~~~---~ 131 (182)
T COG4567 62 KLGDGSGLAVIEA-LRER-RADMRIVVLTGYASIATAVEAVKLGACDYLA-K----PADADDILAALLRREPDEDT---A 131 (182)
T ss_pred eecCCCchHHHHH-HHhc-CCcceEEEEecchHHHHHHHHHHhhhhhhcC-C----CCChHHHHHHHhhcCCCccc---C
Confidence 3444455555443 3332 3455555556888887777653322233311 1 23678888888754222222 3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcC
Q 047180 204 CAHNPTGVDPSEEQWKEISYQIKAKG 229 (337)
Q Consensus 204 ~p~NPTG~~~s~~~~~~l~~~~~~~~ 229 (337)
.|+||+.+ .+=+||.|-+...+++
T Consensus 132 ~~~~pmS~--~rl~WEhIqrvl~e~~ 155 (182)
T COG4567 132 PPENPMSA--DRLRWEHIQRVLEECE 155 (182)
T ss_pred CCCCCCch--hHhhHHHHHHHHHHhC
Confidence 47999875 5778898888777653
No 434
>PLN02460 indole-3-glycerol-phosphate synthase
Probab=33.99 E-value=61 Score=30.66 Aligned_cols=79 Identities=9% Similarity=-0.060 Sum_probs=52.8
Q ss_pred eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 146 QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 146 ~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
-|+.....|.+-...++..-...+.+|+... +|-+|.-++.++-.. .. .+++++. .+++.++++++.+.|
T Consensus 157 SVLTd~~~F~Gs~e~L~~vr~~~v~lPvLrK-DFIID~yQI~eAr~~-GA-DAVLLIa-------aiL~~~~L~~l~~~A 226 (338)
T PLN02460 157 SVLTDEKYFQGSFENLEAIRNAGVKCPLLCK-EFIVDAWQIYYARSK-GA-DAILLIA-------AVLPDLDIKYMLKIC 226 (338)
T ss_pred EEecCcCcCCCCHHHHHHHHHcCCCCCEeec-cccCCHHHHHHHHHc-CC-CcHHHHH-------HhCCHHHHHHHHHHH
Confidence 4556666666665555443211156677544 799999888776442 22 3444433 578999999999999
Q ss_pred HhcCceeEE
Q 047180 226 KAKGHFPFF 234 (337)
Q Consensus 226 ~~~~~~ii~ 234 (337)
++.|+-+++
T Consensus 227 ~~LGme~LV 235 (338)
T PLN02460 227 KSLGMAALI 235 (338)
T ss_pred HHcCCeEEE
Confidence 999988776
No 435
>PRK07476 eutB threonine dehydratase; Provisional
Probab=33.98 E-value=2.4e+02 Score=26.26 Aligned_cols=50 Identities=14% Similarity=0.050 Sum_probs=31.8
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
+...+|+.+..+++..- ...-.-.|++|...-+.-...++..|++++.++
T Consensus 71 v~aSsGN~g~alA~~a~-~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~ 120 (322)
T PRK07476 71 VTASTGNHGRALAYAAR-ALGIRATICMSRLVPANKVDAIRALGAEVRIVG 120 (322)
T ss_pred EEECCChHHHHHHHHHH-HhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEEC
Confidence 45566777776665332 211124666666555667788899999998775
No 436
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=33.89 E-value=3.3e+02 Score=23.99 Aligned_cols=98 Identities=14% Similarity=0.141 Sum_probs=55.3
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCc--eeeEeeeccCCCCCCChHH-HHHHHHcCCCCeE
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHV--TQRTFHYYHPGTKGLDFAA-LMDDIKNAPNGSF 198 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~--~~~~~~~~~~~~~~~d~~~-l~~~l~~~~~~~~ 198 (337)
++|.|+.+-=..+++.+.. .|-+|++-+---......++..|. .-..+..+-. ..-|.+. |++....- .+.-
T Consensus 18 ~vtGg~sGIGrAia~~la~--~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS--~a~~v~~~l~e~~k~~-g~ps 92 (256)
T KOG1200|consen 18 AVTGGSSGIGRAIAQLLAK--KGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVS--KAHDVQNTLEEMEKSL-GTPS 92 (256)
T ss_pred EEecCCchHHHHHHHHHHh--cCcEEEEeecchhhHHHHHhhcCCCCccceeeeccC--cHHHHHHHHHHHHHhc-CCCc
Confidence 4455555555556677776 799999988777777777776665 2222222111 1122333 33333222 2445
Q ss_pred EEEeCCCCCCCCCC--CCHHHHHHHHHH
Q 047180 199 FLLHACAHNPTGVD--PSEEQWKEISYQ 224 (337)
Q Consensus 199 ili~~~p~NPTG~~--~s~~~~~~l~~~ 224 (337)
+++||---+-.|.. ++.++|...+.+
T Consensus 93 vlVncAGItrD~~Llrmkq~qwd~vi~v 120 (256)
T KOG1200|consen 93 VLVNCAGITRDGLLLRMKQEQWDSVIAV 120 (256)
T ss_pred EEEEcCccccccceeeccHHHHHHHHHh
Confidence 67777555555543 688899887763
No 437
>COG5625 Predicted transcription regulator containing HTH domain [Transcription]
Probab=33.61 E-value=41 Score=25.79 Aligned_cols=25 Identities=16% Similarity=0.224 Sum_probs=19.1
Q ss_pred cccccceeEeeeCCHHHHHHHHHHHH
Q 047180 276 YGQRVGCLSVLCEDEKQAVAVKSQLQ 301 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~~~~l~ 301 (337)
-|| +||+...++.++.++++.+.+.
T Consensus 73 kgW-vGYiya~~~P~k~leei~~~i~ 97 (113)
T COG5625 73 KGW-VGYIYATTPPPKPLEEIEEEIM 97 (113)
T ss_pred ccc-eeeEecCCCCchHHHHHHHHHH
Confidence 477 8999988888888887766443
No 438
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=32.65 E-value=3.6e+02 Score=25.05 Aligned_cols=48 Identities=21% Similarity=0.095 Sum_probs=30.1
Q ss_pred EeeccchhHHHHHHHHHhhhCCC--CeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 122 VQSLSGTGACRLFADFQKRFHPD--SQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pg--d~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
+...+|+.+..++..+-. .| -.|++|.-.-+.-...++..|++++.++
T Consensus 55 v~aSsGN~g~alA~~a~~---~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~ 104 (316)
T cd06448 55 VCSSGGNAGLAAAYAARK---LGVPCTIVVPESTKPRVVEKLRDEGATVVVHG 104 (316)
T ss_pred EEeCCcHHHHHHHHHHHH---cCCCEEEEECCCCCHHHHHHHHHcCCEEEEEC
Confidence 444566777766653322 24 3555555444555778889999998765
No 439
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=32.42 E-value=3.2e+02 Score=24.43 Aligned_cols=84 Identities=11% Similarity=0.129 Sum_probs=50.2
Q ss_pred EEeeccchhHHHHHH-HHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 121 AVQSLSGTGACRLFA-DFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 121 ~~~t~g~~~al~~~~-~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
+++|.+++|+|-.++ .-+.+ .|=.|+-..-.-..-.+.....|.++..+.+.+++ +...++..+.+.+..++=
T Consensus 10 VlItgcs~GGIG~ala~ef~~--~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~----~V~~v~~evr~~~~Gkld 83 (289)
T KOG1209|consen 10 VLITGCSSGGIGYALAKEFAR--NGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPE----EVVTVSGEVRANPDGKLD 83 (289)
T ss_pred EEEeecCCcchhHHHHHHHHh--CCeEEEEEccccchHhhHHHhhCCeeEEeccCChH----HHHHHHHHHhhCCCCceE
Confidence 567777788887765 33444 68777777666666666666788777766553321 233444444444555664
Q ss_pred EEeCCCCCCCC
Q 047180 200 LLHACAHNPTG 210 (337)
Q Consensus 200 li~~~p~NPTG 210 (337)
++.||..-|+-
T Consensus 84 ~L~NNAG~~C~ 94 (289)
T KOG1209|consen 84 LLYNNAGQSCT 94 (289)
T ss_pred EEEcCCCCCcc
Confidence 55455555543
No 440
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=32.26 E-value=60 Score=27.64 Aligned_cols=49 Identities=18% Similarity=0.167 Sum_probs=34.8
Q ss_pred CChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC
Q 047180 181 LDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG 240 (337)
Q Consensus 181 ~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~ 240 (337)
-|...+.+++. .-++.. -|.-++.+.++.|.+..++++++|+.|--|.+
T Consensus 12 ~D~~~lk~~~d-----~~~I~T------~Gs~i~~~~i~~i~~~~~~rgVIIfTDpD~~G 60 (174)
T TIGR00334 12 DDQARIKQAFD-----VDVIET------NGSALKDETINLIKKAQKKQGVIILTDPDFPG 60 (174)
T ss_pred hHHHHHHHhcC-----ceEEEE------CCCccCHHHHHHHHHHhhcCCEEEEeCCCCch
Confidence 46667766552 123332 25667999999999999999999999975543
No 441
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=32.15 E-value=2.8e+02 Score=25.41 Aligned_cols=86 Identities=12% Similarity=0.127 Sum_probs=45.8
Q ss_pred hhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec-------cCCCCCCChHHHHHHHHcCCCCeEEEE-eCCCC--CC
Q 047180 139 KRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY-------HPGTKGLDFAALMDDIKNAPNGSFFLL-HACAH--NP 208 (337)
Q Consensus 139 ~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~-------~~~~~~~d~~~l~~~l~~~~~~~~ili-~~~p~--NP 208 (337)
.+..++.+|++... ......++.+|..++.-.-. -..+...+++++.+++.....+..+++ |+.-+ ++
T Consensus 86 ~~~~~~~kv~viG~--~~l~~~l~~~G~~~~~~~~~~~~d~Vv~g~d~~~~~e~l~~a~~~i~~g~~fI~tNpD~~~p~~ 163 (269)
T COG0647 86 AKQKPGKKVYVIGE--EGLKEELEGAGFELVDEEEPARVDAVVVGLDRTLTYEKLAEALLAIAAGAPFIATNPDLTVPTE 163 (269)
T ss_pred HhhCCCCEEEEECC--cchHHHHHhCCcEEeccCCCCcccEEEEecCCCCCHHHHHHHHHHHHcCCcEEEeCCCccccCC
Confidence 34335678877763 45667788888776652110 112345677888777655433433333 22222 33
Q ss_pred CCCCCCHHHHHHHHHHHH
Q 047180 209 TGVDPSEEQWKEISYQIK 226 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~ 226 (337)
-|..+-.--+.++++.+.
T Consensus 164 ~g~~pgaGai~~~~~~~t 181 (269)
T COG0647 164 RGLRPGAGAIAALLEQAT 181 (269)
T ss_pred CCCccCcHHHHHHHHHhh
Confidence 455555555555555443
No 442
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=32.04 E-value=3.2e+02 Score=27.30 Aligned_cols=47 Identities=11% Similarity=0.100 Sum_probs=22.0
Q ss_pred CCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc--CceeEE
Q 047180 180 GLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK--GHFPFF 234 (337)
Q Consensus 180 ~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~--~~~ii~ 234 (337)
.++.+++.+.+.+.+ ..+|.+. +.+.+.....++++.+++. ++.||.
T Consensus 49 ~~~~~~~~~~l~~~~-pdvVgis-------~~t~~~~~a~~~~~~~k~~~P~~~iV~ 97 (497)
T TIGR02026 49 PLTDEKLVERLRAHC-PDLVLIT-------AITPAIYIACETLKFARERLPNAIIVL 97 (497)
T ss_pred CCCHHHHHHHHHhcC-cCEEEEe-------cCcccHHHHHHHHHHHHHHCCCCEEEE
Confidence 345555555554322 2233331 1223445555666666654 554443
No 443
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=31.95 E-value=3.5e+02 Score=23.67 Aligned_cols=89 Identities=15% Similarity=0.206 Sum_probs=53.4
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCC-cchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTW-SNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y-~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
++++.||..|..=+-.++. .|..|.+-+|.. +.+....+..+...+ + ..++.+.+. . ..+
T Consensus 15 VlvvGgG~va~rKa~~ll~---~ga~v~Vvs~~~~~el~~~~~~~~i~~~-----~---~~~~~~~~~-------~-~~l 75 (210)
T COG1648 15 VLVVGGGSVALRKARLLLK---AGADVTVVSPEFEPELKALIEEGKIKWI-----E---REFDAEDLD-------D-AFL 75 (210)
T ss_pred EEEECCCHHHHHHHHHHHh---cCCEEEEEcCCccHHHHHHHHhcCcchh-----h---cccChhhhc-------C-ceE
Confidence 5778888888887655554 699999999999 445555554442211 1 223333322 1 334
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCcee-EEcc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAKGHFP-FFDM 236 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~i-i~De 236 (337)
++.+. + +.+.=+++.+.|+++++++ +.|+
T Consensus 76 viaAt-~-------d~~ln~~i~~~a~~~~i~vNv~D~ 105 (210)
T COG1648 76 VIAAT-D-------DEELNERIAKAARERRILVNVVDD 105 (210)
T ss_pred EEEeC-C-------CHHHHHHHHHHHHHhCCceeccCC
Confidence 44343 2 2356688999999987654 3344
No 444
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=31.91 E-value=22 Score=24.80 Aligned_cols=23 Identities=26% Similarity=0.283 Sum_probs=19.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcC
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKG 229 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~ 229 (337)
+=|.|.. +.++++.|++++++++
T Consensus 15 ~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 15 RIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp B-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred eCCCEEE-CHHHHHHHHHHHHHhC
Confidence 5567887 9999999999999976
No 445
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=31.68 E-value=99 Score=28.67 Aligned_cols=80 Identities=18% Similarity=0.172 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCC
Q 047180 128 TGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAH 206 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~ 206 (337)
.+++.++-.+ .+ -| |.+++..|+|.-..+ .+ -.+.+....+.. +-++++. |.|
T Consensus 86 ~eai~lak~a-~~--~Gad~il~v~PyY~k~~~-------------------~g-l~~hf~~ia~a~-~lPvilY-N~P- 139 (299)
T COG0329 86 AEAIELAKHA-EK--LGADGILVVPPYYNKPSQ-------------------EG-LYAHFKAIAEAV-DLPVILY-NIP- 139 (299)
T ss_pred HHHHHHHHHH-Hh--cCCCEEEEeCCCCcCCCh-------------------HH-HHHHHHHHHHhc-CCCEEEE-eCc-
Confidence 3556555433 33 34 899999999863220 00 123343333332 2345554 444
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 207 NPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 207 NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
+.||..++.+.+.+|++ -.+++=|=|.
T Consensus 140 ~~tg~~l~~e~i~~la~---~~nivgiKd~ 166 (299)
T COG0329 140 SRTGVDLSPETIARLAE---HPNIVGVKDS 166 (299)
T ss_pred cccCCCCCHHHHHHHhc---CCCEEEEEeC
Confidence 78999999999887776 2355555554
No 446
>PRK01160 hypothetical protein; Provisional
Probab=30.42 E-value=3.2e+02 Score=23.38 Aligned_cols=78 Identities=17% Similarity=0.079 Sum_probs=42.5
Q ss_pred CCCCCCCCCHHHHHHHHHH---HHhc-CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccc
Q 047180 206 HNPTGVDPSEEQWKEISYQ---IKAK-GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVG 281 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~---~~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 281 (337)
.||-|. +|.+-|+.|-+. +... .+.|++| .++|...+....-.....+++ ||-|+ .|
T Consensus 90 ~NPpGt-It~el~~ai~~a~~~~~~~~~~~I~Vd----------GEEDLa~lP~il~aP~gs~Vl------YGQP~--eG 150 (178)
T PRK01160 90 RNPPGT-ITLALLRAIKKAFSLIERGKKVRIEVN----------GEEDLAVIPAVLYAPLGTVVA------YGQPD--EG 150 (178)
T ss_pred ECCCCc-ccHHHHHHHHHHHHhhhcCCeEEEEEc----------ChHHHHHHHHHHhcCCCCEEE------eCCCC--Cc
Confidence 799997 688888888775 3322 2355554 234433333221112345554 45566 46
Q ss_pred eeEeeeCCHHHHHHHHHHHHhh
Q 047180 282 CLSVLCEDEKQAVAVKSQLQQL 303 (337)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~~ 303 (337)
.+++ .-+++...++.+-|+++
T Consensus 151 vV~v-~v~~e~K~~~~~ll~~~ 171 (178)
T PRK01160 151 MVLI-KVTPECKRRCAEILRKM 171 (178)
T ss_pred EEEE-EeCHHHHHHHHHHHHHh
Confidence 5554 34677666666655543
No 447
>PLN00011 cysteine synthase
Probab=30.25 E-value=4.5e+02 Score=24.44 Aligned_cols=51 Identities=12% Similarity=0.032 Sum_probs=33.5
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
++...+|+.++.++..+-.. .=.-+|++|..+-+.-...++..|++++.++
T Consensus 72 vv~aSsGN~g~alA~~a~~~-G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~ 122 (323)
T PLN00011 72 LIEATAGNTGIGLACIGAAR-GYKVILVMPSTMSLERRIILRALGAEVHLTD 122 (323)
T ss_pred EEEeCCChHHHHHHHHHHHc-CCeEEEEeCCCCCHHHHHHHHHcCCEEEEEC
Confidence 34566777777766543321 1124667776666667788899999998775
No 448
>cd06565 GH20_GcnA-like Glycosyl hydrolase family 20 (GH20) catalytic domain of N-acetyl-beta-D-glucosaminidase (GcnA, also known as BhsA) and related proteins. GcnA is an exoglucosidase which cleaves N-acetyl-beta-D-galactosamine (NAG) and N-acetyl-beta-D-galactosamine residues from 4-methylumbelliferylated (4MU) substrates, as well as cleaving NAG from chito-oligosaccharides (i.e. NAG polymers). In contrast, sulfated forms of the substrate are unable to be cleaved and act instead as mild competitive inhibitors. Additionally, the enzyme is known to be poisoned by several first-row transition metals as well as by mercury. GcnA forms a homodimer with subunits comprised of three domains, an N-terminal zincin-like domain, this central catalytic GH20 domain, and a C-terminal alpha helical domain. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=30.18 E-value=64 Score=29.94 Aligned_cols=25 Identities=16% Similarity=-0.032 Sum_probs=21.9
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
+-.||++|+++|++.|+++++-||=
T Consensus 54 ~~~yT~~ei~ei~~yA~~~gI~vIP 78 (301)
T cd06565 54 RGAYTKEEIREIDDYAAELGIEVIP 78 (301)
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEe
Confidence 4459999999999999999987775
No 449
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=29.81 E-value=37 Score=31.54 Aligned_cols=27 Identities=7% Similarity=-0.012 Sum_probs=22.3
Q ss_pred CHHHHHHHHHHHHh-cCceeEEcccCCC
Q 047180 214 SEEQWKEISYQIKA-KGHFPFFDMAYQG 240 (337)
Q Consensus 214 s~~~~~~l~~~~~~-~~~~ii~De~Y~~ 240 (337)
...++++|++||.+ ++.+||.||++.-
T Consensus 157 ~~sRl~ql~~W~g~dfdgvivfDEcH~a 184 (303)
T PF13872_consen 157 YRSRLDQLVDWCGEDFDGVIVFDECHKA 184 (303)
T ss_pred ccchHHHHHHHHhcCCCceEEeccchhc
Confidence 34689999999954 7899999999863
No 450
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=29.70 E-value=3.1e+02 Score=22.40 Aligned_cols=92 Identities=15% Similarity=0.097 Sum_probs=48.8
Q ss_pred eeccchhHH--HHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEE
Q 047180 123 QSLSGTGAC--RLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFL 200 (337)
Q Consensus 123 ~t~g~~~al--~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~il 200 (337)
.+.|++|.+ .++-.++. .|-.|....-.=..... ..+.+++... -.|.+.+.+++.. -..++
T Consensus 2 ~V~GatG~vG~~l~~~L~~---~~~~V~~~~R~~~~~~~---~~~~~~~~~d-------~~d~~~~~~al~~---~d~vi 65 (183)
T PF13460_consen 2 LVFGATGFVGRALAKQLLR---RGHEVTALVRSPSKAED---SPGVEIIQGD-------LFDPDSVKAALKG---ADAVI 65 (183)
T ss_dssp EEETTTSHHHHHHHHHHHH---TTSEEEEEESSGGGHHH---CTTEEEEESC-------TTCHHHHHHHHTT---SSEEE
T ss_pred EEECCCChHHHHHHHHHHH---CCCEEEEEecCchhccc---ccccccceee-------ehhhhhhhhhhhh---cchhh
Confidence 345555443 33334444 35455544433222222 4455554332 2577889888863 23444
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCc---eeEEc
Q 047180 201 LHACAHNPTGVDPSEEQWKEISYQIKAKGH---FPFFD 235 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~~~~l~~~~~~~~~---~ii~D 235 (337)
. +-+.++. ..+..+.+++.|++.++ ++++.
T Consensus 66 ~-~~~~~~~----~~~~~~~~~~a~~~~~~~~~v~~s~ 98 (183)
T PF13460_consen 66 H-AAGPPPK----DVDAAKNIIEAAKKAGVKRVVYLSS 98 (183)
T ss_dssp E-CCHSTTT----HHHHHHHHHHHHHHTTSSEEEEEEE
T ss_pred h-hhhhhcc----cccccccccccccccccccceeeec
Confidence 4 3333333 37778889999988765 55554
No 451
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=29.58 E-value=1.7e+02 Score=22.22 Aligned_cols=19 Identities=26% Similarity=0.163 Sum_probs=9.1
Q ss_pred CHHHHHHHHHHHHhcCcee
Q 047180 214 SEEQWKEISYQIKAKGHFP 232 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~i 232 (337)
+.++.++|.+.+++++..+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~ 116 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKV 116 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCE
T ss_pred CHHHHHHHHHHHHHhCCEE
Confidence 4445555555555444433
No 452
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=28.95 E-value=76 Score=32.71 Aligned_cols=37 Identities=16% Similarity=0.214 Sum_probs=32.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCC
Q 047180 204 CAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFAS 243 (337)
Q Consensus 204 ~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~ 243 (337)
.|++.-| ++++++++++-|.+++|-||.|=+|..|..
T Consensus 205 Ap~sryG---tPedfk~fVD~aH~~GIgViLD~V~~HF~~ 241 (628)
T COG0296 205 APTSRYG---TPEDFKALVDAAHQAGIGVILDWVPNHFPP 241 (628)
T ss_pred cccccCC---CHHHHHHHHHHHHHcCCEEEEEecCCcCCC
Confidence 3677777 579999999999999999999999998853
No 453
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed
Probab=28.79 E-value=2.1e+02 Score=25.84 Aligned_cols=57 Identities=14% Similarity=0.060 Sum_probs=38.5
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
+.+|+.. .+|-.|+.++.++... . ...+++... .++.++++++++.|++.|+-++.|
T Consensus 110 v~iPvl~-kdfi~~~~qi~~a~~~-G-AD~VlLi~~-------~l~~~~l~~li~~a~~lGl~~lve 166 (260)
T PRK00278 110 VSLPVLR-KDFIIDPYQIYEARAA-G-ADAILLIVA-------ALDDEQLKELLDYAHSLGLDVLVE 166 (260)
T ss_pred cCCCEEe-eeecCCHHHHHHHHHc-C-CCEEEEEec-------cCCHHHHHHHHHHHHHcCCeEEEE
Confidence 4556543 3577787777776653 2 345555432 245689999999999999888887
No 454
>cd07484 Peptidases_S8_Thermitase_like Peptidase S8 family domain in Thermitase-like proteins. Thermitase is a non-specific, trypsin-related serine protease with a very high specific activity. It contains a subtilisin like domain. The tertiary structure of thermitase is similar to that of subtilisin BPN'. It contains a Asp/His/Ser catalytic triad. Members of the peptidases S8 (subtilisin and kexin) and S53 (sedolisin) clan include endopeptidases and exopeptidases. The S8 family has an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure and are not homologous to trypsin. Serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base. The S53 family contains a catalytic triad Glu/Asp/Ser with an additional acidic residue Asp in the oxyanion hole, similar to that of subtilisin. The serine residue here is the nucleophilic equivalent of the serine residue in the S8 family, while glutamic acid
Probab=28.29 E-value=1.4e+02 Score=26.54 Aligned_cols=64 Identities=11% Similarity=0.045 Sum_probs=34.6
Q ss_pred ceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 166 VTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 166 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
++++.+.+.+. ....+...+.+++.......+-+++.+ -|.......++++++.+.++++++|.
T Consensus 95 a~l~~~~v~~~-~~~~~~~~~~~ai~~a~~~~~~iin~S----~g~~~~~~~~~~~~~~a~~~gilvV~ 158 (260)
T cd07484 95 AKIMPVKVLDA-NGSGSLADIANGIRYAADKGAKVINLS----LGGGLGSTALQEAINYAWNKGVVVVA 158 (260)
T ss_pred CEEEEEEEECC-CCCcCHHHHHHHHHHHHHCCCeEEEec----CCCCCCCHHHHHHHHHHHHCCCEEEE
Confidence 45555554332 223345555544433211222234333 34443557788888999999988876
No 455
>PRK06483 dihydromonapterin reductase; Provisional
Probab=27.76 E-value=3.9e+02 Score=22.90 Aligned_cols=46 Identities=11% Similarity=-0.109 Sum_probs=22.4
Q ss_pred eeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeE
Q 047180 123 QSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRT 170 (337)
Q Consensus 123 ~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~ 170 (337)
++.|+++++-.. +..|.+ .|..|++.+-.-......++..|...+.
T Consensus 6 lItGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~ 52 (236)
T PRK06483 6 LITGAGQRIGLALAWHLLA--QGQPVIVSYRTHYPAIDGLRQAGAQCIQ 52 (236)
T ss_pred EEECCCChHHHHHHHHHHH--CCCeEEEEeCCchhHHHHHHHcCCEEEE
Confidence 445555444333 344444 6777776654333333444445544433
No 456
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=27.61 E-value=2.5e+02 Score=25.98 Aligned_cols=47 Identities=11% Similarity=0.015 Sum_probs=28.4
Q ss_pred hHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccC
Q 047180 183 FAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAY 238 (337)
Q Consensus 183 ~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y 238 (337)
++.++++.+. ..+.++++ .+ |. +.++-++|.++|+++++.|+==.+.
T Consensus 79 ~~~l~e~~~~-gvk~avI~-s~-----Gf--~~~~~~~l~~~a~~~girvlGPNc~ 125 (291)
T PRK05678 79 ADAILEAIDA-GIDLIVCI-TE-----GI--PVLDMLEVKAYLERKKTRLIGPNCP 125 (291)
T ss_pred HHHHHHHHHC-CCCEEEEE-CC-----CC--CHHHHHHHHHHHHHcCCEEECCCCC
Confidence 4666666552 33334444 32 22 3454568999999999988755443
No 457
>PRK07102 short chain dehydrogenase; Provisional
Probab=27.58 E-value=3.8e+02 Score=23.12 Aligned_cols=31 Identities=6% Similarity=0.051 Sum_probs=16.5
Q ss_pred eeccchhHHHHHH-HHHhhhCCCCeEEEcCCCCc
Q 047180 123 QSLSGTGACRLFA-DFQKRFHPDSQIYIPVPTWS 155 (337)
Q Consensus 123 ~t~g~~~al~~~~-~~l~~~~pgd~Vlv~~P~y~ 155 (337)
++.||++++-..+ ..|.+ .|-+|++.+-.-.
T Consensus 5 lItGas~giG~~~a~~l~~--~G~~Vi~~~r~~~ 36 (243)
T PRK07102 5 LIIGATSDIARACARRYAA--AGARLYLAARDVE 36 (243)
T ss_pred EEEcCCcHHHHHHHHHHHh--cCCEEEEEeCCHH
Confidence 4556665554433 34444 5777776654433
No 458
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=27.54 E-value=4.7e+02 Score=23.75 Aligned_cols=18 Identities=33% Similarity=0.385 Sum_probs=14.8
Q ss_pred CCC--CCCCCCHHHHHHHHH
Q 047180 206 HNP--TGVDPSEEQWKEISY 223 (337)
Q Consensus 206 ~NP--TG~~~s~~~~~~l~~ 223 (337)
||| ||..++.+.+++|++
T Consensus 131 n~P~~tg~~l~~~~l~~L~~ 150 (285)
T TIGR00674 131 NVPSRTGVSLYPETVKRLAE 150 (285)
T ss_pred ECcHHhcCCCCHHHHHHHHc
Confidence 455 799999999998874
No 459
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=27.15 E-value=5e+02 Score=23.95 Aligned_cols=148 Identities=14% Similarity=0.079 Sum_probs=72.5
Q ss_pred hHHHHHHHHhcCcCCCCCCC-CCCCHHHHHHHHHHHhCCCCcccccCce-eEEeeccchhHHHHH---HHHHhhhCCCCe
Q 047180 72 ECVREAERRIAGTANMEYLP-MGGSVKMVEETLKLAYGDNSEFIKDKRI-AAVQSLSGTGACRLF---ADFQKRFHPDSQ 146 (337)
Q Consensus 72 ~~v~~a~~~~~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~~~~~~~~~i-~~~~t~g~~~al~~~---~~~l~~~~pgd~ 146 (337)
..++.+++. ....|.. +....+|.+++.+...... ...++ .++-.-||.|.-.++ +..+.+ .|.+
T Consensus 55 ~~~~~a~~~----Ga~~~l~~P~~~~~l~~~l~~~~~~~~----~~~~vIav~~~KGGvGkTT~a~nLA~~la~--~g~~ 124 (322)
T TIGR03815 55 ALWRAAAAV----GAEHVAVLPEAEGWLVELLADLDQSPP----ARGVVVAVIGGRGGAGASTLAAALALAAAR--HGLR 124 (322)
T ss_pred HHHHHHHHh----ChhheeeCCCCHHHHHHHHHhhccCCC----CCceEEEEEcCCCCCcHHHHHHHHHHHHHh--cCCC
Confidence 345665543 1233443 2235678888876531111 11222 222234554443322 234444 5765
Q ss_pred EEE--cCCCCcchHHHHHhcCceeeE-e---eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHH
Q 047180 147 IYI--PVPTWSNHHNIWRDAHVTQRT-F---HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKE 220 (337)
Q Consensus 147 Vlv--~~P~y~~y~~~~~~~G~~~~~-~---~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~ 220 (337)
|++ .+|..+... ...|.+..+ + .+ ......+|.+.+.+.+.. .. .+-++ +.+.++ +..++.+.+++
T Consensus 125 VlLvD~D~~~~~~~---~~lg~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~-~~-~l~vl-~~~~~~-~~~~~~~~l~~ 196 (322)
T TIGR03815 125 TLLVDADPWGGGLD---LLLGAEDVPGLRWPDL-SQARGRLPAGALRDALPR-RG-GLSVL-SWGRAV-GAALPPAAVRA 196 (322)
T ss_pred EEEEecCCCCCCee---eeecCCCCCCcCHHHH-hhcCCCcCHHHHHHhCCC-cC-CeEEE-ecCCCC-cCCCCHHHHHH
Confidence 555 456655322 123332110 0 00 011234566666666543 22 23333 555544 45588899999
Q ss_pred HHHHHHhcCceeEEccc
Q 047180 221 ISYQIKAKGHFPFFDMA 237 (337)
Q Consensus 221 l~~~~~~~~~~ii~De~ 237 (337)
+++.++++-=+||.|-.
T Consensus 197 ~l~~l~~~~D~VIID~p 213 (322)
T TIGR03815 197 VLDAARRGGDLVVVDLP 213 (322)
T ss_pred HHHHHHhcCCEEEEeCC
Confidence 99988876667888865
No 460
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=26.96 E-value=95 Score=31.46 Aligned_cols=29 Identities=17% Similarity=0.286 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-+|..+.
T Consensus 158 ~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 158 GPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 57999999999999999999999987653
No 461
>COG4821 Uncharacterized protein containing SIS (Sugar ISomerase) phosphosugar binding domain [General function prediction only]
Probab=26.76 E-value=1.9e+02 Score=25.45 Aligned_cols=34 Identities=21% Similarity=0.361 Sum_probs=27.0
Q ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 194 PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
+.+.++++.+|--||.+. +++++++++|..||.=
T Consensus 104 ~~DVliviSnSGrNpvpi--------e~A~~~rekGa~vI~v 137 (243)
T COG4821 104 PNDVLIVISNSGRNPVPI--------EVAEYAREKGAKVIAV 137 (243)
T ss_pred CCCEEEEEeCCCCCCcch--------HHHHHHHhcCCeEEEE
Confidence 455678888999999987 5788999998777654
No 462
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=26.37 E-value=4.6e+02 Score=23.27 Aligned_cols=149 Identities=12% Similarity=0.059 Sum_probs=83.8
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEE---E---cCC-CC----cch---HHHHHhcCceeeEeeeccCCCCCCChHHHH
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIY---I---PVP-TW----SNH---HNIWRDAHVTQRTFHYYHPGTKGLDFAALM 187 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vl---v---~~P-~y----~~y---~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~ 187 (337)
....||..+...+..++.. |-.|. . .++ +| ++. .-.++..|..++...... ...-..+++.
T Consensus 5 aL~SGGKDS~~Al~~a~~~---G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve~L~ 79 (223)
T COG2102 5 ALYSGGKDSFYALYLALEE---GHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVEELK 79 (223)
T ss_pred EEEecCcHHHHHHHHHHHc---CCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHHHHH
Confidence 4567888887777777653 53221 1 122 12 222 124456777766665421 1233467887
Q ss_pred HHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEe
Q 047180 188 DDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQ 267 (337)
Q Consensus 188 ~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (337)
+.+.... .-.++ +|.++++.+..++=.+|++.++-++ ..+--.| +..-+..+...+-+.+++.
T Consensus 80 ~~l~~l~--~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~-----~PLWg~d---~~ell~e~~~~Gf~~~Iv~ 142 (223)
T COG2102 80 EALRRLK--VDGIV-------AGAIASEYQKERVERLCEELGLKVY-----APLWGRD---PEELLEEMVEAGFEAIIVA 142 (223)
T ss_pred HHHHhCc--ccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe-----ecccCCC---HHHHHHHHHHcCCeEEEEE
Confidence 7776432 12333 7999999999999999999998654 4443211 1223344555556677765
Q ss_pred cccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 268 SYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 268 S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
. ...|++..=+|.-+ +.+.++.++.
T Consensus 143 V--sa~gL~~~~lGr~i----~~~~~e~l~~ 167 (223)
T COG2102 143 V--SAEGLDESWLGRRI----DREFLEELKS 167 (223)
T ss_pred E--eccCCChHHhCCcc----CHHHHHHHHH
Confidence 3 23455544466543 4444454443
No 463
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=26.09 E-value=5e+02 Score=23.55 Aligned_cols=99 Identities=14% Similarity=0.058 Sum_probs=48.9
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH---HhcCc---eeeEeeeccCCCCCCChHHHH-HHHHc-C
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW---RDAHV---TQRTFHYYHPGTKGLDFAALM-DDIKN-A 193 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~---~~~G~---~~~~~~~~~~~~~~~d~~~l~-~~l~~-~ 193 (337)
++|.|+++-=..++..|.+ .|.+|.+..=.=..-.... ...|. ++..+.++-. ..-+.+.+. ..+++ .
T Consensus 12 lVTG~s~GIG~aia~~la~--~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~~~~l~~~~~~~~~ 87 (270)
T KOG0725|consen 12 LVTGGSSGIGKAIALLLAK--AGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVS--KEVDVEKLVEFAVEKFF 87 (270)
T ss_pred EEECCCChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCC--CHHHHHHHHHHHHHHhC
Confidence 4444444433344455566 7988888765544322222 22333 3555544211 112233332 23332 1
Q ss_pred CCCeEEEEeCCCCCCC--CCCCCHHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHNPT--GVDPSEEQWKEISYQ 224 (337)
Q Consensus 194 ~~~~~ili~~~p~NPT--G~~~s~~~~~~l~~~ 224 (337)
.+-.+++.|.-.++++ ...++.++|+++.++
T Consensus 88 GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~ 120 (270)
T KOG0725|consen 88 GKIDILVNNAGALGLTGSILDLSEEVFDKIMAT 120 (270)
T ss_pred CCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhh
Confidence 2234445443334434 477899999988875
No 464
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=26.07 E-value=1.1e+02 Score=28.89 Aligned_cols=77 Identities=16% Similarity=0.109 Sum_probs=42.0
Q ss_pred hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCC-eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 157 HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG-SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 157 y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
+....+..|.+.. +.++...|+-++ |+.+.-. ..+=+-++|.+ |-..+.+...++++-+++.|+-|+.|
T Consensus 8 ~~~~~E~~G~~f~-----~~~G~~~d~~~i---lk~~G~N~vRlRvwv~P~~--~g~~~~~~~~~~akrak~~Gm~vlld 77 (332)
T PF07745_consen 8 SLPEMEAAGVKFY-----DENGQEKDLFQI---LKDHGVNAVRLRVWVNPYD--GGYNDLEDVIALAKRAKAAGMKVLLD 77 (332)
T ss_dssp THHHHHHTT---B------TTSSB--HHHH---HHHTT--EEEEEE-SS-TT--TTTTSHHHHHHHHHHHHHTT-EEEEE
T ss_pred HHHHHHHcCCeEE-----CCCCCCCCHHHH---HHhcCCCeEEEEeccCCcc--cccCCHHHHHHHHHHHHHCCCeEEEe
Confidence 3455677886522 222333444444 4433222 12222233444 48899999999999999999999999
Q ss_pred ccCCCCCC
Q 047180 236 MAYQGFAS 243 (337)
Q Consensus 236 e~Y~~~~~ 243 (337)
--|+|+-.
T Consensus 78 fHYSD~Wa 85 (332)
T PF07745_consen 78 FHYSDFWA 85 (332)
T ss_dssp E-SSSS--
T ss_pred ecccCCCC
Confidence 99999853
No 465
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=25.86 E-value=1.4e+02 Score=27.33 Aligned_cols=28 Identities=29% Similarity=0.224 Sum_probs=20.6
Q ss_pred CCC--CCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 206 HNP--TGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 206 ~NP--TG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
||| ||..++.+.+++|++ -.+++-|=|.
T Consensus 135 n~P~~tg~~l~~~~~~~L~~---~pnivgiK~s 164 (288)
T cd00954 135 HIPALTGVNLTLEQFLELFE---IPNVIGVKFT 164 (288)
T ss_pred eCccccCCCCCHHHHHHHhc---CCCEEEEEeC
Confidence 455 799999999888875 3466666665
No 466
>PF04002 RadC: RadC-like JAB domain; InterPro: IPR001405 This family was named initially with reference to the Escherichia coli radC102 mutation which suggested that RadC was involved in repair of DNA lesions []. However the relevant mutation has subsequently been shown to be in recG, not radC []. In addition all attempts to characterise a radiation-related function for RadC in Streptococcus pneumoniae failed, suggesting that it is not involved in repair of DNA lesions, in recombination during transformation, in gene conversion, nor in mismatch repair [].; PDB: 2QLC_A.
Probab=25.84 E-value=1.9e+02 Score=22.82 Aligned_cols=57 Identities=21% Similarity=0.339 Sum_probs=28.9
Q ss_pred CChHH-HHHHHHcCCCCeEEEEeCCCCCCCCCC-CCHHHH---HHHHHHHHh-----cCceeEEcccCCCC
Q 047180 181 LDFAA-LMDDIKNAPNGSFFLLHACAHNPTGVD-PSEEQW---KEISYQIKA-----KGHFPFFDMAYQGF 241 (337)
Q Consensus 181 ~d~~~-l~~~l~~~~~~~~ili~~~p~NPTG~~-~s~~~~---~~l~~~~~~-----~~~~ii~De~Y~~~ 241 (337)
+++.+ +..++.. ....++++. |-|+|.. .|.+++ ++|.+.|+. .|.+||.++-|.-|
T Consensus 51 v~~R~I~~~al~~-~A~~vIl~H---NHPsG~~~PS~~D~~~T~~L~~~~~~l~I~llDHiIv~~~~~~S~ 117 (123)
T PF04002_consen 51 VDPREIFRRALRL-NASSVILAH---NHPSGDPEPSDADIALTRRLKKAARLLGIELLDHIIVGDGGYFSF 117 (123)
T ss_dssp CSHHHHHHHHHHT-T-SEEEEEE---E-TTS--S--HHHHHHHHHHHHHHHHHT-EEEEEEEEESSEEEET
T ss_pred ccHHHHHHHHHhh-CCceEEEEE---EcCCCCCCCCHhHHHHHHHHHHHHHHcCCeeeeEEEEeCCcEEEe
Confidence 34443 3445553 344666665 5566765 455555 566666666 35566666666444
No 467
>PRK13802 bifunctional indole-3-glycerol phosphate synthase/tryptophan synthase subunit beta; Provisional
Probab=25.79 E-value=1.7e+02 Score=30.66 Aligned_cols=78 Identities=6% Similarity=-0.020 Sum_probs=51.7
Q ss_pred eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 146 QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 146 ~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
-|+.....|.+-...++.. .+.+.+|+... +|-+|..++.++-.. .. ..|+++. .+++.+++++|.+.|
T Consensus 88 SVlTe~~~F~Gs~~~l~~v-r~~v~~PvLrK-DFIid~~QI~ea~~~-GA-DavLLI~-------~~L~~~~l~~l~~~a 156 (695)
T PRK13802 88 SVLTEGRRFLGSLDDFDKV-RAAVHIPVLRK-DFIVTDYQIWEARAH-GA-DLVLLIV-------AALDDAQLKHLLDLA 156 (695)
T ss_pred EEecCcCcCCCCHHHHHHH-HHhCCCCEEec-cccCCHHHHHHHHHc-CC-CEeehhH-------hhcCHHHHHHHHHHH
Confidence 3444445555555555443 23456777554 799999888876542 22 4455533 468889999999999
Q ss_pred HhcCceeEE
Q 047180 226 KAKGHFPFF 234 (337)
Q Consensus 226 ~~~~~~ii~ 234 (337)
++.|+-+++
T Consensus 157 ~~lGme~Lv 165 (695)
T PRK13802 157 HELGMTVLV 165 (695)
T ss_pred HHcCCeEEE
Confidence 999987776
No 468
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=25.75 E-value=87 Score=25.71 Aligned_cols=79 Identities=8% Similarity=0.044 Sum_probs=47.9
Q ss_pred CCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccC----CCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHH
Q 047180 142 HPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHP----GTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQ 217 (337)
Q Consensus 142 ~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~----~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~ 217 (337)
.+|++|.+..- ++++...++..+.++.-+..... ....+..+..++.+.. ..++++ ||.++--..
T Consensus 9 ~~~~~V~~VG~-f~P~~~~l~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~l~~---aD~vii-------TGsTlvN~T 77 (147)
T PF04016_consen 9 GPGDKVGMVGY-FQPLVEKLKERGAEVRVFDLNPDNIGEEPGDVPDEDAEEILPW---ADVVII-------TGSTLVNGT 77 (147)
T ss_dssp TTTSEEEEES---HCCHHHHCCCCSEEEEEESSGGG--SSCT-EEGGGHHHHGGG----SEEEE-------ECHHCCTTT
T ss_pred cCCCEEEEEcC-cHHHHHHHhcCCCCEEEEECCCCCCCCCCCcCCHHHHHHHHcc---CCEEEE-------EeeeeecCC
Confidence 37888888763 33466666666777777765331 1122334455555542 345565 788888888
Q ss_pred HHHHHHHHHhcCce
Q 047180 218 WKEISYQIKAKGHF 231 (337)
Q Consensus 218 ~~~l~~~~~~~~~~ 231 (337)
++.|++.|++...+
T Consensus 78 i~~iL~~~~~~~~v 91 (147)
T PF04016_consen 78 IDDILELARNAREV 91 (147)
T ss_dssp HHHHHHHTTTSSEE
T ss_pred HHHHHHhCccCCeE
Confidence 99999999854333
No 469
>KOG3851 consensus Sulfide:quinone oxidoreductase/flavo-binding protein [Energy production and conversion]
Probab=25.54 E-value=51 Score=31.14 Aligned_cols=50 Identities=10% Similarity=0.012 Sum_probs=31.6
Q ss_pred eEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceee
Q 047180 120 AAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQR 169 (337)
Q Consensus 120 ~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~ 169 (337)
.++++.||++++.++.++-..+..|...+++.--+.-|...+.+.|+-..
T Consensus 41 kvLVvGGGsgGi~~A~k~~rkl~~g~vgIvep~e~HyYQPgfTLvGgGl~ 90 (446)
T KOG3851|consen 41 KVLVVGGGSGGIGMAAKFYRKLGSGSVGIVEPAEDHYYQPGFTLVGGGLK 90 (446)
T ss_pred EEEEEcCCcchhHHHHHHHhhcCCCceEEecchhhcccCcceEEeccchh
Confidence 35778899999999998877654454444443344445555555554433
No 470
>PRK14467 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=25.44 E-value=5.2e+02 Score=24.59 Aligned_cols=18 Identities=28% Similarity=0.289 Sum_probs=9.0
Q ss_pred CCCCCHHHHHHHHHHHHh
Q 047180 210 GVDPSEEQWKEISYQIKA 227 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~ 227 (337)
|..=+.++.++|+++++.
T Consensus 262 GvNDs~e~a~~La~~l~~ 279 (348)
T PRK14467 262 GVNDSPEDALRLAQLIGK 279 (348)
T ss_pred CccCCHHHHHHHHHHHhc
Confidence 444445555555555544
No 471
>PRK06815 hypothetical protein; Provisional
Probab=25.26 E-value=4e+02 Score=24.72 Aligned_cols=51 Identities=12% Similarity=0.048 Sum_probs=31.6
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeee
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~ 173 (337)
+...+|+.+..++..+- ...-.-+|++|...-+.-...++..|++++.++-
T Consensus 72 v~aSsGN~g~alA~~a~-~~G~~~~i~~p~~~~~~k~~~~~~~GA~V~~~~~ 122 (317)
T PRK06815 72 ITASSGNHGQGVALAAK-LAGIPVTVYAPEQASAIKLDAIRALGAEVRLYGG 122 (317)
T ss_pred EEECCChHHHHHHHHHH-HhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 34456666665554322 2112246777766655567788999999998863
No 472
>PRK11761 cysM cysteine synthase B; Provisional
Probab=25.05 E-value=2.6e+02 Score=25.72 Aligned_cols=49 Identities=10% Similarity=0.021 Sum_probs=32.2
Q ss_pred EEeeccchhHHHHHHHHHhhhCCC--CeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPD--SQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pg--d~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
++...+|+.++.++..+-. .| -+|++|.-.-+.-...++..|++++.++
T Consensus 66 vv~aSsGN~g~alA~~a~~---~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~ 116 (296)
T PRK11761 66 LIEATSGNTGIALAMIAAI---KGYRMKLIMPENMSQERRAAMRAYGAELILVP 116 (296)
T ss_pred EEEeCCChHHHHHHHHHHH---cCCCEEEEECCCCCHHHHHHHHHcCCEEEEeC
Confidence 4556777777777654322 24 3555555444556778889999999886
No 473
>PRK10717 cysteine synthase A; Provisional
Probab=24.95 E-value=3e+02 Score=25.65 Aligned_cols=52 Identities=12% Similarity=0.031 Sum_probs=34.3
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeee
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~ 173 (337)
++.+.+|+.++.+++.+- ...-.-+|++|.-.-+.-...++..|++++.++-
T Consensus 67 vv~aSsGN~g~alA~~a~-~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~ 118 (330)
T PRK10717 67 IVEGTAGNTGIGLALVAA-ARGYKTVIVMPETQSQEKKDLLRALGAELVLVPA 118 (330)
T ss_pred EEEeCCcHHHHHHHHHHH-HcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCC
Confidence 455667777776665432 2112257777776655567788999999998863
No 474
>COG1111 MPH1 ERCC4-like helicases [DNA replication, recombination, and repair]
Probab=24.43 E-value=2e+02 Score=28.80 Aligned_cols=106 Identities=8% Similarity=-0.112 Sum_probs=55.6
Q ss_pred EEeeccchhHHHHHHH--HHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc--CCCCCCChHHHHHHHHcCCCC
Q 047180 121 AVQSLSGTGACRLFAD--FQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH--PGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~--~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~ 196 (337)
++.|.-|...+.++.. .| .+.+| +|++..||=|.-.+.++.. .++..+|-.+ .-+..++++.=+..+. .
T Consensus 35 vlPTGLGKT~IA~~V~~~~l-~~~~~-kvlfLAPTKPLV~Qh~~~~-~~v~~ip~~~i~~ltGev~p~~R~~~w~---~- 107 (542)
T COG1111 35 VLPTGLGKTFIAAMVIANRL-RWFGG-KVLFLAPTKPLVLQHAEFC-RKVTGIPEDEIAALTGEVRPEEREELWA---K- 107 (542)
T ss_pred EecCCccHHHHHHHHHHHHH-HhcCC-eEEEecCCchHHHHHHHHH-HHHhCCChhheeeecCCCChHHHHHHHh---h-
Confidence 4566666666655442 33 33366 9999999999887655432 1222222100 1135678887766664 2
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
..+++ ..|| +.--+-+..+.++= .=.+||.|||+..-
T Consensus 108 ~kVfv-aTPQ-----vveNDl~~Grid~~--dv~~lifDEAHRAv 144 (542)
T COG1111 108 KKVFV-ATPQ-----VVENDLKAGRIDLD--DVSLLIFDEAHRAV 144 (542)
T ss_pred CCEEE-eccH-----HHHhHHhcCccChH--HceEEEechhhhcc
Confidence 23444 3353 33222222222211 12568899998643
No 475
>PF06462 Hyd_WA: Propeller; InterPro: IPR006624 Tectonins I and II are two dominant proteins in the nuclei and nuclear matrix from plasmodia of Physarum polycephalum (Slime mold) which encode 217 and 353 amino acids, respectively. Tectonin I is homologous to the C-terminal two-thirds of tectonin II. Both proteins contain six tandem repeats that are each 33-37 amino acids in length and define a new consensus sequence. Homologous repeats are found in L-6, a bacterial lipopolysaccharide-binding lectin from horseshoe crab hemocytes. The repetitive sequences of the tectonins and L-6 are reminiscent of the WD repeats of the beta-subunit of G proteins, suggesting that they form beta-propeller domains. The tectonins may be lectins that function as part of a transmembrane signalling complex during phagocytosis [].
Probab=24.36 E-value=47 Score=19.63 Aligned_cols=11 Identities=27% Similarity=0.389 Sum_probs=8.7
Q ss_pred CCCCCCCCCCC
Q 047180 203 ACAHNPTGVDP 213 (337)
Q Consensus 203 ~~p~NPTG~~~ 213 (337)
-++.||+|..+
T Consensus 18 is~~~P~G~~W 28 (32)
T PF06462_consen 18 ISPSNPEGTSW 28 (32)
T ss_pred CCCCCCCCCCc
Confidence 36899999875
No 476
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=24.23 E-value=88 Score=25.14 Aligned_cols=48 Identities=15% Similarity=0.066 Sum_probs=28.2
Q ss_pred HHHHhcCceeeEeeeccCCCCCCC---hHHHHHHHHcCCCCeEEEEeCCCCCCCCC
Q 047180 159 NIWRDAHVTQRTFHYYHPGTKGLD---FAALMDDIKNAPNGSFFLLHACAHNPTGV 211 (337)
Q Consensus 159 ~~~~~~G~~~~~~~~~~~~~~~~d---~~~l~~~l~~~~~~~~ili~~~p~NPTG~ 211 (337)
..+...|.+++.+|+.. +.++ .+.+.+.+...+ .+ +++.|.-.+=||.
T Consensus 51 ~~a~~~gl~y~~iPv~~---~~~~~~~v~~f~~~~~~~~-~p-vL~HC~sG~Rt~~ 101 (135)
T TIGR01244 51 AAAEAAGVTYHHQPVTA---GDITPDDVETFRAAIGAAE-GP-VLAYCRSGTRSSL 101 (135)
T ss_pred HHHHHCCCeEEEeecCC---CCCCHHHHHHHHHHHHhCC-CC-EEEEcCCChHHHH
Confidence 45567899999999843 3454 445555565432 33 5555754444444
No 477
>KOG2656 consensus DNA methyltransferase 1-associated protein-1 [Chromatin structure and dynamics; Transcription]
Probab=24.16 E-value=74 Score=30.52 Aligned_cols=26 Identities=19% Similarity=-0.036 Sum_probs=22.7
Q ss_pred CCCCHHHHHHHHHHHHhcC--ceeEEcc
Q 047180 211 VDPSEEQWKEISYQIKAKG--HFPFFDM 236 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~--~~ii~De 236 (337)
..||.+|-+.|.++|+++| ++||.|-
T Consensus 131 n~WskeETD~LF~lck~fDLRf~VIaDR 158 (445)
T KOG2656|consen 131 NSWSKEETDYLFDLCKRFDLRFFVIADR 158 (445)
T ss_pred ccccHHHHHHHHHHHHhcCeeEEEEeec
Confidence 5799999999999999986 6777775
No 478
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=24.06 E-value=5.9e+02 Score=23.71 Aligned_cols=97 Identities=13% Similarity=0.071 Sum_probs=49.2
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch---HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCe
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH---HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGS 197 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y---~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 197 (337)
+++|.||.|-=..++.-+++ .|-++++-+=.=.+. ...++..| ++..|-++-.+ .=++..+.+.+++.-...
T Consensus 41 vLITGgg~GlGr~ialefa~--rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~--~eei~~~a~~Vk~e~G~V 115 (300)
T KOG1201|consen 41 VLITGGGSGLGRLIALEFAK--RGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISD--REEIYRLAKKVKKEVGDV 115 (300)
T ss_pred EEEeCCCchHHHHHHHHHHH--hCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCC--HHHHHHHHHHHHHhcCCc
Confidence 57777777665555544444 476665544333333 33444445 66666552221 112344444554432333
Q ss_pred EEEEeCCC---CCCCCCCCCHHHHHHHHH
Q 047180 198 FFLLHACA---HNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p---~NPTG~~~s~~~~~~l~~ 223 (337)
-+++ ||. ++-.....+++++++..+
T Consensus 116 ~ILV-NNAGI~~~~~ll~~~d~ei~k~~~ 143 (300)
T KOG1201|consen 116 DILV-NNAGIVTGKKLLDCSDEEIQKTFD 143 (300)
T ss_pred eEEE-eccccccCCCccCCCHHHHHHHHH
Confidence 4555 332 122233478888888655
No 479
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=24.05 E-value=6.1e+02 Score=23.87 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=66.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcC---CCCcchHHHHH
Q 047180 86 NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPV---PTWSNHHNIWR 162 (337)
Q Consensus 86 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~---P~y~~y~~~~~ 162 (337)
...|...+|.+.--+.|++-+.+.. + + ++++.++..|-.++.. . .+--|++.. |-=......++
T Consensus 64 ~i~~~na~~~~~~a~~iarql~~~~-----~-d--viv~i~tp~Aq~~~s~-~----~~iPVV~aavtd~v~a~Lv~~~~ 130 (322)
T COG2984 64 KIDYQNAQGDLGTAAQIARQLVGDK-----P-D--VIVAIATPAAQALVSA-T----KTIPVVFAAVTDPVGAKLVKSLE 130 (322)
T ss_pred EEEeecCCCChHHHHHHHHHhhcCC-----C-c--EEEecCCHHHHHHHHh-c----CCCCEEEEccCchhhccCCcccc
Confidence 3456778899988888888875543 1 1 3445555444333221 1 232344333 33222223333
Q ss_pred hcCceeeEeeeccCCCCCCChHHHHHHHHc-CCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 163 DAHVTQRTFHYYHPGTKGLDFAALMDDIKN-APNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 163 ~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
.-|..+..+. +..+.++-.+.++. .|.-+.+-+.++|+-+ -+...+++|-+.+++.|+-|++=
T Consensus 131 ~pg~NvTGvs------D~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~----ns~~l~eelk~~A~~~Gl~vve~ 194 (322)
T COG2984 131 QPGGNVTGVS------DLLPVAQQIELIKALLPNAKSIGVLYNPGEA----NSVSLVEELKKEARKAGLEVVEA 194 (322)
T ss_pred CCCCceeecC------CcchHHHHHHHHHHhCCCCeeEEEEeCCCCc----ccHHHHHHHHHHHHHCCCEEEEE
Confidence 4444555442 12334433333322 1333333223555443 56788999999999999999874
No 480
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=24.01 E-value=4.6e+02 Score=24.10 Aligned_cols=50 Identities=10% Similarity=0.050 Sum_probs=26.1
Q ss_pred Eeeccc---hhHHHHHHHHHhhhCCCCeEEEcCCC-CcchHHHHHhcCceeeEee
Q 047180 122 VQSLSG---TGACRLFADFQKRFHPDSQIYIPVPT-WSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 122 ~~t~g~---~~al~~~~~~l~~~~pgd~Vlv~~P~-y~~y~~~~~~~G~~~~~~~ 172 (337)
+++.|+ +.++.+++.+ ....-.-+|++|... -.....+++..|++++.++
T Consensus 59 vv~~g~ssGN~g~alA~~a-~~~G~~~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~ 112 (311)
T TIGR01275 59 VITVGAIQSNHARATALAA-KKLGLDAVLVLREKEELNGNLLLDKLMGAETRVYS 112 (311)
T ss_pred EEEcCCchhHHHHHHHHHH-HHhCCceEEEecCCccCCCCHHHHHHcCCEEEEEC
Confidence 567653 4444444322 221112355555422 2234556789999998765
No 481
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=23.87 E-value=81 Score=31.31 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 68999999999999999999999887654
No 482
>TIGR02064 dsrA sulfite reductase, dissimilatory-type alpha subunit. This model describes the alpha subunit of sulfite reductase.
Probab=23.85 E-value=71 Score=31.08 Aligned_cols=25 Identities=16% Similarity=0.206 Sum_probs=23.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcC
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKG 229 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~ 229 (337)
.+-|.|..+|.+++++|++++++++
T Consensus 86 v~~P~G~~~tteqLR~LaDiaekYG 110 (402)
T TIGR02064 86 VAQPSGKFYSTDYLRQLCDVWEKYG 110 (402)
T ss_pred EecCCCCCCCHHHHHHHHHHHHHhC
Confidence 4778999999999999999999986
No 483
>PRK02854 primosomal protein DnaI; Provisional
Probab=23.38 E-value=1e+02 Score=26.10 Aligned_cols=36 Identities=11% Similarity=0.116 Sum_probs=27.0
Q ss_pred HHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q 047180 190 IKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKA 227 (337)
Q Consensus 190 l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~ 227 (337)
+.+.....+.|++ -|-|...+++.+.+++|+++-.+
T Consensus 24 l~~A~G~pVAILN--~N~PaFY~Vpa~~yE~L~e~e~~ 59 (179)
T PRK02854 24 LAKAEGGVVAVFA--NNAPAFYAVTPARLAELLALEEK 59 (179)
T ss_pred HHhcCCCeEEEec--CCCceEEEeCHHHHHHHHHHHHH
Confidence 3333344566664 38899999999999999998665
No 484
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=23.16 E-value=2.8e+02 Score=25.19 Aligned_cols=61 Identities=16% Similarity=0.049 Sum_probs=0.0
Q ss_pred hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---CCCCeEEEEeCCCCCC--CCCCCCHHHHHHHHH
Q 047180 157 HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---APNGSFFLLHACAHNP--TGVDPSEEQWKEISY 223 (337)
Q Consensus 157 y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~~ili~~~p~NP--TG~~~s~~~~~~l~~ 223 (337)
....++.+|++.+-+-.... +..+-+.+.+.+++ ....++++- ||| ||..+|.+.+++|++
T Consensus 87 ~a~~a~~~G~d~v~~~~P~~--~~~~~~~l~~~~~~ia~~~~~pi~lY----n~P~~~g~~ls~~~~~~L~~ 152 (284)
T cd00950 87 LTKRAEKAGADAALVVTPYY--NKPSQEGLYAHFKAIAEATDLPVILY----NVPGRTGVNIEPETVLRLAE 152 (284)
T ss_pred HHHHHHHcCCCEEEEccccc--CCCCHHHHHHHHHHHHhcCCCCEEEE----EChhHhCCCCCHHHHHHHhc
No 485
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=23.14 E-value=2.3e+02 Score=22.10 Aligned_cols=34 Identities=9% Similarity=0.091 Sum_probs=22.8
Q ss_pred HHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeee
Q 047180 136 DFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 136 ~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~ 173 (337)
+.|.+ .|-+|.+-.+ +.|...++..|.+.++++.
T Consensus 20 ~~L~~--rGh~V~~~~~--~~~~~~v~~~Gl~~~~~~~ 53 (139)
T PF03033_consen 20 RALRR--RGHEVRLATP--PDFRERVEAAGLEFVPIPG 53 (139)
T ss_dssp HHHHH--TT-EEEEEET--GGGHHHHHHTT-EEEESSS
T ss_pred HHHhc--cCCeEEEeec--ccceecccccCceEEEecC
Confidence 45555 7877766665 5577778999999888754
No 486
>TIGR03599 YloV DAK2 domain fusion protein YloV. This model describes a protein family that contains an N-terminal DAK2 domain (pfam02734), so named because of similarity to the dihydroxyacetone kinase family family. The GTP-binding protein CgtA (a member of the obg family) is a bacterial GTPase associated with ribosome biogenesis, and it has a characteristic extension (TIGR03595) in certain lineages. This protein family described here was found, by the method of partial phylognetic profiling, to have a phylogenetic distribution strongly correlated to that of TIGR03595. This correlation implies some form of functional coupling.
Probab=23.09 E-value=2.1e+02 Score=29.04 Aligned_cols=76 Identities=14% Similarity=0.128 Sum_probs=44.2
Q ss_pred EEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 047180 147 IYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIK 226 (337)
Q Consensus 147 Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~ 226 (337)
|+...|+-. ....++..|+.++- + ..++..+..+++.+++...+.+.++|+ |||+ -..+..++-.++ .
T Consensus 317 ivAv~~g~g-~~~~f~~~Ga~~vi-~--ggqt~nPS~~dll~ai~~~~a~~V~iL---PNn~-nii~aA~qa~~~---~- 384 (530)
T TIGR03599 317 IVAVAPGEG-IAELFKSLGADVVI-E--GGQTMNPSTEDILKAIEKVNAKNVFVL---PNNK-NIILAAEQAAEL---A- 384 (530)
T ss_pred EEEEcCCch-HHHHHHHCCCCEEE-e--CCCCCCCCHHHHHHHHHhCCCCeEEEe---cCCc-cHHHHHHHHHHH---h-
Confidence 444455543 67788899987552 2 222334566889988887665555554 6885 444555544443 2
Q ss_pred hcCceeEE
Q 047180 227 AKGHFPFF 234 (337)
Q Consensus 227 ~~~~~ii~ 234 (337)
++++.||-
T Consensus 385 ~~~v~vvp 392 (530)
T TIGR03599 385 DKNVVVIP 392 (530)
T ss_pred CCcEEEEe
Confidence 45665554
No 487
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=23.04 E-value=5.5e+02 Score=23.67 Aligned_cols=51 Identities=12% Similarity=0.006 Sum_probs=30.5
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
++...+|+.++.++... ....-.-.|++|.-+-+.-...++..|++++.++
T Consensus 73 vv~~SsGN~g~alA~~a-~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~ 123 (324)
T cd01563 73 VACASTGNTSASLAAYA-ARAGIKCVVFLPAGKALGKLAQALAYGATVLAVE 123 (324)
T ss_pred EEEeCCCHHHHHHHHHH-HHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEEC
Confidence 34455778777766432 2211124555655553445667889999998764
No 488
>PRK10595 SOS cell division inhibitor; Provisional
Probab=23.01 E-value=4.6e+02 Score=22.07 Aligned_cols=92 Identities=9% Similarity=0.039 Sum_probs=55.4
Q ss_pred HHHHHHhhhC-CCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCC
Q 047180 133 LFADFQKRFH-PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGV 211 (337)
Q Consensus 133 ~~~~~l~~~~-pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~ 211 (337)
+++-+|.... .+..|+...|-+..|...+...|.....+-.....+..-.+..+|+++... .-..|+.-. |+
T Consensus 44 LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG-~~~aVL~Wl-p~----- 116 (164)
T PRK10595 44 LLLPLLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTG-NYSVVLGWL-PD----- 116 (164)
T ss_pred HHHHHHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhC-CCcEEEECC-cc-----
Confidence 4444444322 467888889999999999999998755554322212222346777777642 223344321 21
Q ss_pred CCCHHHHHHHHHHHHhcCce
Q 047180 212 DPSEEQWKEISYQIKAKGHF 231 (337)
Q Consensus 212 ~~s~~~~~~l~~~~~~~~~~ 231 (337)
-++.+++++|---|++-+.+
T Consensus 117 ~l~~~~~RRLQlAAe~g~~l 136 (164)
T PRK10595 117 ELTEEEHARLVDAAQEGNAM 136 (164)
T ss_pred cCCHHHHHHHHHHHHhCCCE
Confidence 46788888887666665543
No 489
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=23.00 E-value=34 Score=29.02 Aligned_cols=87 Identities=11% Similarity=0.088 Sum_probs=57.7
Q ss_pred CeEEEcCCCCcchHHHHHh--cCceeeEeeeccCCCCCCChHHHHHHHHcCCCC-e----------EEEEeCCCCCCCCC
Q 047180 145 SQIYIPVPTWSNHHNIWRD--AHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG-S----------FFLLHACAHNPTGV 211 (337)
Q Consensus 145 d~Vlv~~P~y~~y~~~~~~--~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~-~----------~ili~~~p~NPTG~ 211 (337)
-.-++|+|.++.|..-+.. .|..--.| +. +..++++++++.+++..+. + ++--|.++..|.|-
T Consensus 59 ~~~w~p~P~f~Iyi~nIhk~kHGSDSg~Y---D~-eGrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW 134 (174)
T PF05042_consen 59 QPSWIPDPFFRIYIKNIHKGKHGSDSGAY---DT-EGRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGW 134 (174)
T ss_pred CCCCCCCCceeEEeecccccccCCCcccc---cc-CCcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchh
Confidence 4458999999999765532 34333222 22 3568888888887764221 1 12335678999999
Q ss_pred CCCHHHHHHHHHHHHhcCceeEEc
Q 047180 212 DPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 212 ~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
..+.-||..+--+++.++-.+==|
T Consensus 135 ~a~~~EW~~~y~L~~d~dG~l~Ke 158 (174)
T PF05042_consen 135 FAAFFEWGALYILAKDKDGFLSKE 158 (174)
T ss_pred hhhhhHHHHHHHHHcCcCCcEeHH
Confidence 999999999999997655444333
No 490
>PRK06500 short chain dehydrogenase; Provisional
Probab=22.88 E-value=4.9e+02 Score=22.34 Aligned_cols=50 Identities=10% Similarity=-0.064 Sum_probs=25.1
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeee
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~ 173 (337)
+++.|+++++-.. +..|.+ .|..|++.+-.-.......+..|.++..+.+
T Consensus 9 vlItGasg~iG~~la~~l~~--~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~ 59 (249)
T PRK06500 9 ALITGGTSGIGLETARQFLA--EGARVAITGRDPASLEAARAELGESALVIRA 59 (249)
T ss_pred EEEeCCCchHHHHHHHHHHH--CCCEEEEecCCHHHHHHHHHHhCCceEEEEe
Confidence 3455665554433 344444 5767766554322223333445666655554
No 491
>PRK05638 threonine synthase; Validated
Probab=22.68 E-value=4.6e+02 Score=25.69 Aligned_cols=48 Identities=10% Similarity=0.013 Sum_probs=28.8
Q ss_pred EeeccchhHHHHHHHHHhhhCCCC--eEEEcCCCCcchHHHHHhcCceeeEee
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDS--QIYIPVPTWSNHHNIWRDAHVTQRTFH 172 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd--~Vlv~~P~y~~y~~~~~~~G~~~~~~~ 172 (337)
+....|+.+..+++.+- . .|= .|++|.=.-+.-...++..|++++.++
T Consensus 116 v~aSsGN~g~alA~~aa-~--~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 116 IVASDGNAAASVAAYSA-R--AGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred EEeCCChHHHHHHHHHH-H--cCCCEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 34556666666655332 2 353 455554333445667888999999875
No 492
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=22.60 E-value=8.5e+02 Score=24.99 Aligned_cols=86 Identities=9% Similarity=0.052 Sum_probs=50.5
Q ss_pred eeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEe
Q 047180 123 QSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLH 202 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~ 202 (337)
.+.|+.++=.++++.+........|.+-|+. -+..|.++..+|+... .+++.+ +++.....+++-.
T Consensus 120 lIiGAG~ag~~l~r~~~~~~~~~pV~fiDdd-------~~~~g~~i~Gv~V~g~----~~i~~~---v~~~~~~~iiiAi 185 (588)
T COG1086 120 LIIGAGSAGDLLLRALRRDPEYTPVAFLDDD-------PDLTGMKIRGVPVLGR----IEIERV---VEELGIQLILIAI 185 (588)
T ss_pred EEEcCchHHHHHHHHHHhCCCcceEEEECCC-------hhhcCCEEeceeeech----hHHHHH---HHHcCCceEEEec
Confidence 4445544444455555542222344444432 2578999999998532 234444 4433344455544
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCc
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGH 230 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~ 230 (337)
|+ ++.++++++.+.|.++++
T Consensus 186 ps--------~~~~~~~~i~~~l~~~~~ 205 (588)
T COG1086 186 PS--------ASQEERRRILLRLARTGI 205 (588)
T ss_pred CC--------CCHHHHHHHHHHHHhcCC
Confidence 43 799999999999999883
No 493
>PRK14457 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=22.57 E-value=6.5e+02 Score=23.85 Aligned_cols=69 Identities=12% Similarity=0.038 Sum_probs=36.8
Q ss_pred HhcCce-eeEeeeccCCCC-CCChHHHHHHHHcCCCCeEEEEeCCCCCCCCC----CCCHHHHHHHHHHHHhcCceeEE
Q 047180 162 RDAHVT-QRTFHYYHPGTK-GLDFAALMDDIKNAPNGSFFLLHACAHNPTGV----DPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 162 ~~~G~~-~~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~----~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
...|.+ .+.|++.+.-+. .-+.+.+.+.+...+ ..+=++ |-||.|. ..++++++++.++++++|+.+..
T Consensus 250 ~~~gr~I~iey~LIpGvNDs~e~a~~La~~l~~l~--~~VnLI--Pynp~~~~~~~~ps~e~i~~f~~~L~~~Gi~vtv 324 (345)
T PRK14457 250 AITGRRVSFEYILLGGVNDLPEHAEELANLLRGFQ--SHVNLI--PYNPIDEVEFQRPSPKRIQAFQRVLEQRGVAVSV 324 (345)
T ss_pred HHhCCEEEEEEEEECCcCCCHHHHHHHHHHHhcCC--CeEEEe--cCCCCCCCCCCCCCHHHHHHHHHHHHHCCCeEEE
Confidence 345544 455666442111 113344544444322 122222 5677664 46788888888888887776654
No 494
>TIGR00695 uxuA mannonate dehydratase. This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.
Probab=21.96 E-value=1.5e+02 Score=28.81 Aligned_cols=31 Identities=23% Similarity=0.142 Sum_probs=26.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeE
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHFPF 233 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii 233 (337)
.-+|-|.|-+|+.++++++-+.++++|+.+=
T Consensus 30 al~~~p~gevW~~~~i~~~k~~ie~~GL~~~ 60 (394)
T TIGR00695 30 ALHHIPNGEVWEKEEIRKRKEYIESAGLHWS 60 (394)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 4468899999999999999999999986543
No 495
>PLN03244 alpha-amylase; Provisional
Probab=21.92 E-value=1.4e+02 Score=31.69 Aligned_cols=40 Identities=13% Similarity=0.155 Sum_probs=33.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCC
Q 047180 204 CAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFAS 243 (337)
Q Consensus 204 ~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~ 243 (337)
++--|+-..=+.++++++++.|.++|+-||.|-+|..+..
T Consensus 429 ~fFApssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~ 468 (872)
T PLN03244 429 NFFAASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAA 468 (872)
T ss_pred cccccCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCC
Confidence 4556666666799999999999999999999999987753
No 496
>PRK14453 chloramphenicol/florfenicol resistance protein; Provisional
Probab=21.89 E-value=6.2e+02 Score=24.02 Aligned_cols=30 Identities=23% Similarity=0.162 Sum_probs=17.9
Q ss_pred CCCCCCCC------CCHHHHHHHHHHHHhcCceeEE
Q 047180 205 AHNPTGVD------PSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 205 p~NPTG~~------~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
|-||+|.. .++++++++.++.+++|+.+..
T Consensus 289 Pyn~~~~~~~~~~~ps~e~v~~f~~~L~~~Gi~vti 324 (347)
T PRK14453 289 PYNSTDKTPFKFQSSSAGQIKQFCSTLKSAGISVTV 324 (347)
T ss_pred cCCCCCCCCccCCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 45666542 4566666666666666655544
No 497
>cd04848 Peptidases_S8_Autotransporter_serine_protease_like Peptidase S8 family domain in Autotransporter serine proteases. Autotransporter serine proteases belong to Peptidase S8 or Subtilase family. Subtilases, or subtilisin-like serine proteases, have an Asp/His/Ser catalytic triad similar to that found in trypsin-like proteases, but do not share their three-dimensional structure (an example of convergent evolution). Autotransporters are a superfamily of outer membrane/secreted proteins of gram-negative bacteria. The presence of these subtilisin-like domains in these autotransporters are may enable them to be auto-catalytic and may also serve to allow them to act as a maturation protease cleaving other outer membrane proteins at the cell surface.
Probab=21.81 E-value=3.3e+02 Score=23.81 Aligned_cols=70 Identities=7% Similarity=0.003 Sum_probs=35.7
Q ss_pred CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCC-----------CCHHHHHHHHHHHHhcCceeE
Q 047180 165 HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVD-----------PSEEQWKEISYQIKAKGHFPF 233 (337)
Q Consensus 165 G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~-----------~s~~~~~~l~~~~~~~~~~ii 233 (337)
+++++.+.+........+...+.+.+.......+-|++.+-..+.... -..+.+.++.+.+.++++++|
T Consensus 71 ~a~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~iv 150 (267)
T cd04848 71 DATLYSARASASAGSTFSDADIAAAYDFLAASGVRIINNSWGGNPAIDTVSTTYKGSAATQGNTLLAALARAANAGGLFV 150 (267)
T ss_pred CCEEEEEeccCCCCcccchHHHHHHHHHHHhCCCeEEEccCCCCCcccccccchhhhccccchHHHHHHHHHhhCCeEEE
Confidence 466666665433211233334433333221122334444444443222 145777888888888998777
Q ss_pred E
Q 047180 234 F 234 (337)
Q Consensus 234 ~ 234 (337)
.
T Consensus 151 ~ 151 (267)
T cd04848 151 F 151 (267)
T ss_pred E
Confidence 5
No 498
>cd04728 ThiG Thiazole synthase (ThiG) is the tetrameric enzyme that is involved in the formation of the thiazole moiety of thiamin pyrophosphate, an essential ubiquitous cofactor that plays an important role in carbohydrate and amino acid metabolism. ThiG catalyzes the formation of thiazole from 1-deoxy-D-xylulose 5-phosphate (DXP) and dehydroglycine, with the help of the sulfur carrier protein ThiS that carries the sulfur needed for thiazole assembly on its carboxy terminus (ThiS-COSH).
Probab=21.79 E-value=6e+02 Score=22.96 Aligned_cols=75 Identities=8% Similarity=0.045 Sum_probs=46.6
Q ss_pred eEEEcCCCCcchH---HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHH
Q 047180 146 QIYIPVPTWSNHH---NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEIS 222 (337)
Q Consensus 146 ~Vlv~~P~y~~y~---~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~ 222 (337)
..++-+=.|+.+. .+++..|.+++.+.+...+...-.-+.+.+.+. .... -+++ | |--+.|.+|--+++
T Consensus 11 Rl~~Gtgky~s~~~~~~ai~aSg~~ivTva~rR~~~~~~~~~~~~~~i~---~~~~-~~lp---N-TaG~~ta~eAv~~a 82 (248)
T cd04728 11 RLLLGTGKYPSPAIMKEAIEASGAEIVTVALRRVNIGDPGGESFLDLLD---KSGY-TLLP---N-TAGCRTAEEAVRTA 82 (248)
T ss_pred ceEEecCCCCCHHHHHHHHHHhCCCEEEEEEEecccCCCCcchHHhhcc---ccCC-EECC---C-CCCCCCHHHHHHHH
Confidence 4555566676664 466789999999988543211122344555443 2223 3334 3 55568999999999
Q ss_pred HHHHhc
Q 047180 223 YQIKAK 228 (337)
Q Consensus 223 ~~~~~~ 228 (337)
+++++-
T Consensus 83 ~lare~ 88 (248)
T cd04728 83 RLAREA 88 (248)
T ss_pred HHHHHH
Confidence 999983
No 499
>TIGR02102 pullulan_Gpos pullulanase, extracellular, Gram-positive. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. In contrast, a glycogen debranching enzyme such GlgX, homologous to this family, can release glucose at alpha,1-6 linkages from glycogen first subjected to limit degradation by phosphorylase. Characterized members of this family include a surface-located pullulanase from Streptococcus pneumoniae (PubMed:11083842) and an extracellular bifunctional amylase/pullulanase with C-terminal pullulanase activity (PubMed:8798645).
Probab=21.76 E-value=1.2e+02 Score=33.75 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=28.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 204 CAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 204 ~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
+|++|.+. .+|++++++-|.++|+-||.|-+|...
T Consensus 546 dp~dp~~r---i~EfK~LV~alH~~GI~VILDVVyNHt 580 (1111)
T TIGR02102 546 DPKDPELR---IAEFKNLINEIHKRGMGVILDVVYNHT 580 (1111)
T ss_pred CCcCcccc---HHHHHHHHHHHHHCCCEEEEecccccc
Confidence 35566553 589999999999999999999999654
No 500
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=21.67 E-value=3.5e+02 Score=23.98 Aligned_cols=74 Identities=15% Similarity=0.117 Sum_probs=46.6
Q ss_pred HHHHHhcCce-eeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 158 HNIWRDAHVT-QRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 158 ~~~~~~~G~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
..+++..|+. +..+|+. . .-.+|++...-+.+.+.. +. --|||-+ +.+..++|+++|.+.++--|.=-
T Consensus 141 iaml~dmG~~SiKffPM~-G---l~~leE~~avA~aca~~g-~~-----lEPTGGI-dl~Nf~~I~~i~ldaGv~kviPH 209 (236)
T TIGR03581 141 IAMLKDMGGSSVKFFPMG-G---LKHLEEYAAVAKACAKHG-FY-----LEPTGGI-DLDNFEEIVQIALDAGVEKVIPH 209 (236)
T ss_pred HHHHHHcCCCeeeEeecC-C---cccHHHHHHHHHHHHHcC-Cc-----cCCCCCc-cHHhHHHHHHHHHHcCCCeeccc
Confidence 4566777776 6667762 1 112444443222211221 22 3789885 88889999999999888888888
Q ss_pred cCCCCC
Q 047180 237 AYQGFA 242 (337)
Q Consensus 237 ~Y~~~~ 242 (337)
+|..+.
T Consensus 210 IYssiI 215 (236)
T TIGR03581 210 VYSSII 215 (236)
T ss_pred cceecc
Confidence 887765
Done!