Query 047180
Match_columns 337
No_of_seqs 183 out of 1786
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 14:47:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047180.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047180hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3k7y_A Aspartate aminotransfer 100.0 2.1E-58 7.1E-63 444.6 33.0 312 23-336 1-314 (405)
2 4h51_A Aspartate aminotransfer 100.0 2.8E-58 9.4E-63 445.0 29.5 313 20-336 14-330 (420)
3 3meb_A Aspartate aminotransfer 100.0 6.8E-49 2.3E-53 382.7 32.6 314 22-335 20-349 (448)
4 4f4e_A Aromatic-amino-acid ami 100.0 2.2E-48 7.6E-53 375.4 33.3 310 23-333 21-331 (420)
5 7aat_A Aspartate aminotransfer 100.0 4.2E-48 1.4E-52 370.5 31.4 312 24-335 1-314 (401)
6 4eu1_A Mitochondrial aspartate 100.0 2.9E-46 9.8E-51 359.1 29.0 307 25-335 15-322 (409)
7 3fsl_A Aromatic-amino-acid ami 100.0 6.7E-45 2.3E-49 347.3 34.8 306 26-332 1-308 (397)
8 1yaa_A Aspartate aminotransfer 100.0 8E-43 2.7E-47 335.2 31.8 305 24-328 2-315 (412)
9 2q7w_A Aspartate aminotransfer 100.0 1.6E-42 5.6E-47 330.6 30.2 301 26-327 1-302 (396)
10 1ajs_A Aspartate aminotransfer 100.0 3.1E-42 1.1E-46 330.9 31.9 303 25-327 4-314 (412)
11 2ay1_A Aroat, aromatic amino a 100.0 8.5E-42 2.9E-46 325.7 30.4 298 26-327 1-299 (394)
12 3rq1_A Aminotransferase class 100.0 6.7E-42 2.3E-46 329.3 22.9 298 30-335 13-326 (418)
13 3t18_A Aminotransferase class 100.0 6.1E-42 2.1E-46 329.1 22.3 296 24-327 6-317 (413)
14 1b5p_A Protein (aspartate amin 100.0 5.9E-40 2E-44 312.8 23.1 272 29-325 7-281 (385)
15 3dyd_A Tyrosine aminotransfera 100.0 1.4E-39 4.7E-44 314.9 22.9 286 26-324 27-315 (427)
16 3b46_A Aminotransferase BNA3; 100.0 3E-38 1E-42 307.3 21.7 283 21-325 22-322 (447)
17 3tcm_A Alanine aminotransferas 100.0 2.3E-37 7.8E-42 305.6 25.9 244 72-325 110-367 (500)
18 3jtx_A Aminotransferase; NP_28 100.0 2.6E-37 9.1E-42 294.6 21.9 265 48-334 27-301 (396)
19 3ihj_A Alanine aminotransferas 100.0 5.8E-37 2E-41 302.6 23.6 292 23-325 28-366 (498)
20 3h14_A Aminotransferase, class 100.0 3.2E-36 1.1E-40 287.0 23.2 276 29-333 7-285 (391)
21 3fvs_A Kynurenine--oxoglutarat 100.0 1.9E-36 6.6E-41 291.2 20.0 275 27-325 7-294 (422)
22 1gd9_A Aspartate aminotransfer 100.0 5.4E-36 1.8E-40 285.1 22.8 274 30-326 7-281 (389)
23 3ele_A Amino transferase; RER0 100.0 2.1E-36 7.2E-41 288.7 18.6 257 51-326 35-303 (398)
24 3aow_A Putative uncharacterize 100.0 4.9E-36 1.7E-40 292.1 21.0 271 31-326 59-336 (448)
25 2x5f_A Aspartate_tyrosine_phen 100.0 9E-36 3.1E-40 287.8 21.9 270 51-331 47-332 (430)
26 2r2n_A Kynurenine/alpha-aminoa 100.0 1.4E-35 4.7E-40 286.5 22.8 269 35-325 16-309 (425)
27 3e2y_A Kynurenine-oxoglutarate 100.0 5.5E-36 1.9E-40 286.7 19.2 254 50-324 22-286 (410)
28 2o1b_A Aminotransferase, class 100.0 5.7E-36 1.9E-40 287.4 18.0 274 29-325 25-300 (404)
29 3ppl_A Aspartate aminotransfer 100.0 7.9E-36 2.7E-40 288.1 18.2 252 51-325 33-306 (427)
30 1j32_A Aspartate aminotransfer 100.0 7.6E-35 2.6E-39 277.0 23.8 254 50-325 29-284 (388)
31 3ezs_A Aminotransferase ASPB; 100.0 6E-35 2E-39 276.4 22.8 274 34-333 5-286 (376)
32 2x5d_A Probable aminotransfera 100.0 1.4E-35 4.6E-40 285.0 18.2 277 27-325 11-292 (412)
33 1o4s_A Aspartate aminotransfer 100.0 6.9E-35 2.4E-39 278.1 22.1 275 30-326 18-294 (389)
34 1bw0_A TAT, protein (tyrosine 100.0 5E-35 1.7E-39 281.0 21.0 281 33-325 14-305 (416)
35 1u08_A Hypothetical aminotrans 100.0 7.5E-35 2.6E-39 277.1 22.0 252 51-325 30-283 (386)
36 3qgu_A LL-diaminopimelate amin 100.0 4.3E-35 1.5E-39 284.5 20.6 253 48-325 66-337 (449)
37 3ei9_A LL-diaminopimelate amin 100.0 6.2E-35 2.1E-39 282.0 20.7 248 49-325 54-325 (432)
38 2dou_A Probable N-succinyldiam 100.0 4.2E-35 1.4E-39 277.9 18.3 252 50-325 24-277 (376)
39 3g0t_A Putative aminotransfera 100.0 3.7E-35 1.3E-39 283.5 16.5 273 39-327 32-327 (437)
40 1iay_A ACC synthase 2, 1-amino 100.0 1E-33 3.5E-38 273.1 25.6 264 52-335 37-324 (428)
41 3nra_A Aspartate aminotransfer 100.0 4E-35 1.4E-39 280.3 15.4 254 52-325 40-300 (407)
42 2o0r_A RV0858C (N-succinyldiam 100.0 2.9E-34 1E-38 275.6 21.1 273 28-325 5-280 (411)
43 3piu_A 1-aminocyclopropane-1-c 100.0 1.3E-33 4.5E-38 273.1 24.6 263 52-334 39-328 (435)
44 3d6k_A Putative aminotransfera 100.0 4.8E-34 1.6E-38 275.4 21.1 260 38-325 21-304 (422)
45 1yiz_A Kynurenine aminotransfe 100.0 4.9E-34 1.7E-38 275.3 20.9 254 51-325 37-302 (429)
46 1xi9_A Putative transaminase; 100.0 7.7E-34 2.6E-38 272.2 22.0 262 41-324 29-296 (406)
47 1vp4_A Aminotransferase, putat 100.0 1.2E-33 4.2E-38 272.7 20.7 255 50-325 42-306 (425)
48 2gb3_A Aspartate aminotransfer 100.0 2.4E-33 8.3E-38 269.2 22.5 275 25-325 14-291 (409)
49 4dq6_A Putative pyridoxal phos 100.0 2.4E-33 8.1E-38 266.3 22.1 254 50-325 31-287 (391)
50 2zc0_A Alanine glyoxylate tran 100.0 5.2E-33 1.8E-37 266.0 24.0 253 52-326 35-294 (407)
51 3fdb_A Beta C-S lyase, putativ 100.0 1.1E-33 3.6E-38 267.7 18.7 250 50-325 22-271 (377)
52 1c7n_A Cystalysin; transferase 100.0 4.3E-33 1.5E-37 265.9 22.6 255 51-325 31-287 (399)
53 3get_A Histidinol-phosphate am 100.0 9.8E-33 3.3E-37 260.4 24.2 249 51-333 30-280 (365)
54 2z61_A Probable aspartate amin 100.0 7.6E-33 2.6E-37 261.8 23.0 257 34-325 10-269 (370)
55 1fg7_A Histidinol phosphate am 100.0 6.5E-33 2.2E-37 261.7 21.3 238 52-334 30-270 (356)
56 3ly1_A Putative histidinol-pho 100.0 9.3E-33 3.2E-37 259.2 22.2 253 49-334 14-267 (354)
57 3kax_A Aminotransferase, class 100.0 9.4E-33 3.2E-37 261.5 22.4 255 50-325 23-279 (383)
58 2zyj_A Alpha-aminodipate amino 100.0 1.5E-32 5.2E-37 262.3 23.6 251 50-327 31-286 (397)
59 3g7q_A Valine-pyruvate aminotr 100.0 1E-33 3.4E-38 271.6 15.1 270 35-330 14-301 (417)
60 3ez1_A Aminotransferase MOCR f 100.0 6.5E-33 2.2E-37 267.0 20.7 254 51-325 25-299 (423)
61 3dzz_A Putative pyridoxal 5'-p 100.0 1.9E-32 6.6E-37 260.0 22.7 255 51-325 27-283 (391)
62 3asa_A LL-diaminopimelate amin 100.0 6.9E-33 2.4E-37 265.2 19.6 250 48-326 30-292 (400)
63 1v2d_A Glutamine aminotransfer 100.0 1.7E-32 5.7E-37 260.5 21.4 262 30-325 7-269 (381)
64 1d2f_A MALY protein; aminotran 100.0 1.3E-32 4.5E-37 261.9 20.6 254 51-325 28-283 (390)
65 3ffh_A Histidinol-phosphate am 100.0 4.8E-32 1.7E-36 255.4 23.5 249 49-333 30-278 (363)
66 3if2_A Aminotransferase; YP_26 100.0 1.8E-33 6.2E-38 272.5 12.3 276 35-330 14-327 (444)
67 3l8a_A METC, putative aminotra 100.0 3.6E-32 1.2E-36 262.1 20.6 256 50-325 60-317 (421)
68 2zy4_A L-aspartate beta-decarb 100.0 5.8E-33 2E-37 276.7 15.1 221 53-296 106-338 (546)
69 3f6t_A Aspartate aminotransfer 100.0 9.4E-33 3.2E-37 274.6 14.7 249 52-324 104-400 (533)
70 3op7_A Aminotransferase class 100.0 2.5E-31 8.4E-36 251.7 22.4 215 85-325 55-269 (375)
71 1lc5_A COBD, L-threonine-O-3-p 100.0 1.8E-30 6.1E-35 245.1 25.6 258 37-331 11-268 (364)
72 3euc_A Histidinol-phosphate am 100.0 8E-31 2.7E-35 247.4 22.6 247 50-332 29-278 (367)
73 3ftb_A Histidinol-phosphate am 100.0 8.9E-31 3E-35 246.2 21.2 244 50-333 25-269 (361)
74 3b1d_A Betac-S lyase; HET: PLP 100.0 7E-34 2.4E-38 271.3 0.0 253 52-325 32-287 (392)
75 3bwn_A AT1G70560, L-tryptophan 100.0 9.9E-32 3.4E-36 257.1 14.6 233 49-326 20-266 (391)
76 1uu1_A Histidinol-phosphate am 100.0 3.5E-30 1.2E-34 240.6 21.7 238 51-335 19-257 (335)
77 3cq5_A Histidinol-phosphate am 100.0 2.2E-30 7.6E-35 245.1 18.9 245 52-328 31-279 (369)
78 3p1t_A Putative histidinol-pho 100.0 8.8E-30 3E-34 237.2 22.1 236 51-333 16-251 (337)
79 3hdo_A Histidinol-phosphate am 100.0 1.2E-28 4E-33 232.3 24.6 240 51-334 26-268 (360)
80 3fkd_A L-threonine-O-3-phospha 100.0 3.8E-29 1.3E-33 234.6 18.1 230 51-327 15-244 (350)
81 2hox_A ALLIIN lyase 1; cystein 100.0 2.7E-29 9.3E-34 243.1 10.2 229 51-325 56-299 (427)
82 3a2b_A Serine palmitoyltransfe 99.9 2.3E-26 7.9E-31 219.3 20.0 241 51-325 43-289 (398)
83 1e5e_A MGL, methionine gamma-l 99.9 9.5E-26 3.3E-30 216.6 24.4 229 54-326 21-260 (404)
84 1bs0_A Protein (8-amino-7-oxon 99.9 3.6E-24 1.2E-28 203.0 22.7 237 51-325 39-282 (384)
85 3tqx_A 2-amino-3-ketobutyrate 99.9 6.7E-24 2.3E-28 201.6 16.7 239 51-325 43-292 (399)
86 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 1E-23 3.4E-28 198.5 17.6 203 50-285 6-222 (371)
87 2rfv_A Methionine gamma-lyase; 99.9 3.9E-23 1.3E-27 197.6 21.5 228 55-325 24-260 (398)
88 1sff_A 4-aminobutyrate aminotr 99.9 5.9E-24 2E-28 204.3 14.1 246 51-324 41-313 (426)
89 1eg5_A Aminotransferase; PLP-d 99.9 1.7E-23 5.9E-28 197.4 14.7 225 68-325 11-253 (384)
90 1t3i_A Probable cysteine desul 99.9 4.7E-23 1.6E-27 196.9 16.7 208 52-295 28-250 (420)
91 2dr1_A PH1308 protein, 386AA l 99.9 6.8E-23 2.3E-27 193.6 16.9 228 68-325 29-272 (386)
92 1vjo_A Alanine--glyoxylate ami 99.9 2.5E-23 8.6E-28 197.6 13.5 226 69-325 44-287 (393)
93 1fc4_A 2-amino-3-ketobutyrate 99.9 3.6E-23 1.2E-27 197.2 13.4 238 50-325 44-294 (401)
94 1jg8_A L-ALLO-threonine aldola 99.9 1.7E-22 5.7E-27 188.8 15.6 212 52-297 4-224 (347)
95 2eh6_A Acoat, acetylornithine 99.9 1.2E-22 4E-27 191.8 14.5 242 51-325 28-287 (375)
96 2ez2_A Beta-tyrosinase, tyrosi 99.9 5.3E-22 1.8E-26 192.6 19.3 222 51-298 33-280 (456)
97 3kki_A CAI-1 autoinducer synth 99.9 4.3E-22 1.5E-26 190.7 17.2 210 52-297 60-276 (409)
98 4adb_A Succinylornithine trans 99.9 3.2E-22 1.1E-26 190.8 16.2 240 51-324 39-297 (406)
99 1kmj_A Selenocysteine lyase; p 99.9 1.3E-21 4.5E-26 185.8 19.2 208 52-295 23-245 (406)
100 1svv_A Threonine aldolase; str 99.9 1E-22 3.4E-27 190.4 10.8 219 51-297 13-237 (359)
101 1ibj_A CBL, cystathionine beta 99.9 5.6E-22 1.9E-26 193.7 15.8 229 52-326 90-328 (464)
102 2bwn_A 5-aminolevulinate synth 99.9 2.3E-21 8E-26 184.8 19.6 224 70-324 61-293 (401)
103 2w8t_A SPT, serine palmitoyltr 99.9 1E-21 3.6E-26 189.4 17.1 204 51-285 64-275 (427)
104 1elu_A L-cysteine/L-cystine C- 99.9 6.7E-23 2.3E-27 193.9 8.4 201 52-285 16-233 (390)
105 3f9t_A TDC, L-tyrosine decarbo 99.9 5.3E-22 1.8E-26 187.6 13.7 207 69-292 41-264 (397)
106 2po3_A 4-dehydrase; external a 99.9 1.2E-21 4.1E-26 188.7 16.2 201 55-298 20-223 (424)
107 2ord_A Acoat, acetylornithine 99.9 4.1E-22 1.4E-26 189.9 12.7 235 51-324 40-296 (397)
108 2oga_A Transaminase; PLP-depen 99.9 2.7E-21 9.3E-26 184.7 17.4 205 51-298 30-237 (399)
109 4eb5_A Probable cysteine desul 99.9 1.7E-21 5.8E-26 183.8 14.1 188 68-286 10-212 (382)
110 3i4j_A Aminotransferase, class 99.9 1.9E-21 6.6E-26 187.4 14.4 255 51-324 29-311 (430)
111 2aeu_A Hypothetical protein MJ 99.9 5.8E-21 2E-25 181.4 17.4 219 52-325 29-253 (374)
112 1b9h_A AHBA synthase, protein 99.9 1.9E-21 6.4E-26 184.6 14.0 182 71-285 16-200 (388)
113 3lvm_A Cysteine desulfurase; s 99.9 2.1E-21 7.2E-26 186.1 14.3 203 50-286 20-238 (423)
114 2z9v_A Aspartate aminotransfer 99.9 6.5E-21 2.2E-25 180.7 15.7 197 68-296 18-217 (392)
115 2eo5_A 419AA long hypothetical 99.9 8.7E-21 3E-25 182.5 16.8 243 51-325 42-326 (419)
116 3dxv_A Alpha-amino-epsilon-cap 99.9 4.6E-21 1.6E-25 185.2 14.4 249 51-324 43-314 (439)
117 1ax4_A Tryptophanase; tryptoph 99.9 2.3E-20 7.8E-25 181.5 19.4 225 51-298 34-290 (467)
118 3a9z_A Selenocysteine lyase; P 99.9 1.8E-20 6.1E-25 180.4 18.2 199 52-285 18-258 (432)
119 1pff_A Methionine gamma-lyase; 99.8 2.4E-20 8.1E-25 173.3 17.9 186 97-324 2-194 (331)
120 3ruy_A Ornithine aminotransfer 99.8 9.9E-21 3.4E-25 179.9 15.6 238 51-325 36-298 (392)
121 1vef_A Acetylornithine/acetyl- 99.8 7.7E-21 2.6E-25 180.8 14.7 245 51-324 45-299 (395)
122 3cai_A Possible aminotransfera 99.8 2.6E-20 8.9E-25 177.5 18.4 200 52-285 26-239 (406)
123 1v72_A Aldolase; PLP-dependent 99.8 1.2E-20 4E-25 176.3 15.2 215 51-297 7-233 (356)
124 2ch1_A 3-hydroxykynurenine tra 99.8 1.2E-20 3.9E-25 179.2 15.3 224 69-325 28-274 (396)
125 2huf_A Alanine glyoxylate amin 99.8 8.7E-21 3E-25 179.9 14.3 206 51-297 18-228 (393)
126 1iug_A Putative aspartate amin 99.8 1.1E-20 3.8E-25 176.2 14.5 219 69-324 11-244 (352)
127 3cog_A Cystathionine gamma-lya 99.8 5.6E-20 1.9E-24 176.4 19.5 190 93-325 67-262 (403)
128 1m32_A 2-aminoethylphosphonate 99.8 1.4E-20 4.8E-25 176.1 14.9 197 53-285 5-206 (366)
129 1cs1_A CGS, protein (cystathio 99.8 1.4E-19 4.7E-24 172.1 21.6 192 92-325 51-247 (386)
130 3l44_A Glutamate-1-semialdehyd 99.8 3.1E-20 1E-24 179.2 17.0 244 51-324 55-318 (434)
131 1gc0_A Methionine gamma-lyase; 99.8 7.9E-20 2.7E-24 174.7 18.8 216 68-325 37-261 (398)
132 3acz_A Methionine gamma-lyase; 99.8 1.3E-19 4.4E-24 172.9 20.1 197 87-325 51-254 (389)
133 4hvk_A Probable cysteine desul 99.8 1.4E-20 4.8E-25 176.9 13.2 159 97-286 47-212 (382)
134 4a6r_A Omega transaminase; tra 99.8 4.6E-20 1.6E-24 179.7 16.9 254 51-324 50-337 (459)
135 3mad_A Sphingosine-1-phosphate 99.8 7.5E-20 2.6E-24 180.6 18.3 207 68-285 110-325 (514)
136 3n5m_A Adenosylmethionine-8-am 99.8 5.2E-20 1.8E-24 178.7 16.7 251 51-324 49-336 (452)
137 3qhx_A Cystathionine gamma-syn 99.8 3.4E-19 1.2E-23 170.2 21.9 190 94-325 67-261 (392)
138 1n8p_A Cystathionine gamma-lya 99.8 6.6E-20 2.2E-24 175.3 16.8 189 93-325 55-252 (393)
139 3zrp_A Serine-pyruvate aminotr 99.8 4.9E-20 1.7E-24 173.7 15.6 197 69-296 12-210 (384)
140 3lws_A Aromatic amino acid bet 99.8 2.8E-20 9.6E-25 174.4 13.5 181 87-298 41-228 (357)
141 3gju_A Putative aminotransfera 99.8 1.8E-19 6E-24 175.6 19.4 255 51-324 51-343 (460)
142 3ndn_A O-succinylhomoserine su 99.8 1.7E-19 5.8E-24 173.7 18.9 154 96-285 84-242 (414)
143 3k28_A Glutamate-1-semialdehyd 99.8 1.9E-20 6.6E-25 180.5 12.1 249 51-325 53-317 (429)
144 3dr4_A Putative perosamine syn 99.8 8.4E-20 2.9E-24 173.5 16.4 204 51-297 22-228 (391)
145 2c81_A Glutamine-2-deoxy-scyll 99.8 8.2E-20 2.8E-24 175.4 16.4 195 68-298 12-215 (418)
146 2pb2_A Acetylornithine/succiny 99.8 8.7E-20 3E-24 175.7 16.1 238 51-324 57-315 (420)
147 1zod_A DGD, 2,2-dialkylglycine 99.8 7.1E-20 2.4E-24 176.5 15.0 247 52-324 44-319 (433)
148 4ffc_A 4-aminobutyrate aminotr 99.8 1.5E-19 5.3E-24 175.8 16.3 248 52-324 65-339 (453)
149 3uwc_A Nucleotide-sugar aminot 99.8 1.9E-19 6.4E-24 169.7 16.2 201 52-297 7-210 (374)
150 3nx3_A Acoat, acetylornithine 99.8 1.8E-19 6.1E-24 171.5 16.2 239 51-324 36-294 (395)
151 1s0a_A Adenosylmethionine-8-am 99.8 3.4E-19 1.2E-23 171.6 18.2 249 52-324 44-325 (429)
152 2yrr_A Aminotransferase, class 99.8 5.1E-20 1.7E-24 171.4 12.0 194 69-296 10-207 (353)
153 2dkj_A Serine hydroxymethyltra 99.8 8.7E-20 3E-24 173.8 13.5 211 51-298 23-249 (407)
154 3fq8_A Glutamate-1-semialdehyd 99.8 2.8E-19 9.5E-24 172.1 17.0 246 51-324 52-315 (427)
155 1o69_A Aminotransferase; struc 99.8 1.9E-19 6.6E-24 171.6 15.6 195 68-298 8-207 (394)
156 3kgw_A Alanine-glyoxylate amin 99.8 1.1E-19 3.6E-24 171.9 13.5 194 69-296 33-231 (393)
157 3isl_A Purine catabolism prote 99.8 3.8E-19 1.3E-23 169.7 17.0 195 69-297 21-220 (416)
158 3nyt_A Aminotransferase WBPE; 99.8 2.2E-19 7.6E-24 169.4 15.0 194 69-298 13-209 (367)
159 1mdo_A ARNB aminotransferase; 99.8 2.4E-19 8.2E-24 170.1 14.8 190 71-298 19-211 (393)
160 3vax_A Putative uncharacterize 99.8 9.3E-20 3.2E-24 173.2 11.6 160 95-285 65-233 (400)
161 1wyu_B Glycine dehydrogenase s 99.8 6.5E-19 2.2E-23 172.4 17.2 172 92-285 102-284 (474)
162 3a8u_X Omega-amino acid--pyruv 99.8 3.3E-18 1.1E-22 165.8 21.8 251 52-324 51-343 (449)
163 3oks_A 4-aminobutyrate transam 99.8 4.3E-19 1.5E-23 172.5 15.6 250 52-324 62-341 (451)
164 3pj0_A LMO0305 protein; struct 99.8 1.9E-19 6.6E-24 168.7 12.5 198 70-298 27-230 (359)
165 2cb1_A O-acetyl homoserine sul 99.8 6.8E-19 2.3E-23 169.0 16.0 165 86-286 47-217 (412)
166 3nnk_A Ureidoglycine-glyoxylat 99.8 5.5E-19 1.9E-23 168.3 15.2 196 69-297 23-222 (411)
167 2cy8_A D-phgat, D-phenylglycin 99.8 3.5E-19 1.2E-23 172.9 14.0 242 51-325 57-320 (453)
168 3ht4_A Aluminum resistance pro 99.8 2.9E-18 9.8E-23 165.9 20.2 156 124-298 89-258 (431)
169 2bkw_A Alanine-glyoxylate amin 99.8 9.7E-19 3.3E-23 165.0 16.3 192 69-285 15-214 (385)
170 3f0h_A Aminotransferase; RER07 99.8 4.9E-19 1.7E-23 166.8 13.9 151 121-296 74-227 (376)
171 3dod_A Adenosylmethionine-8-am 99.8 7.3E-19 2.5E-23 170.6 15.3 249 51-324 44-333 (448)
172 2oqx_A Tryptophanase; lyase, p 99.8 5.1E-18 1.7E-22 164.9 19.5 172 51-237 32-225 (467)
173 3mc6_A Sphingosine-1-phosphate 99.8 6.6E-19 2.2E-23 172.9 13.1 187 86-285 96-293 (497)
174 2fnu_A Aminotransferase; prote 99.8 8.9E-18 3E-22 158.0 20.3 193 68-298 9-206 (375)
175 3i5t_A Aminotransferase; pyrid 99.8 6E-18 2E-22 165.7 19.8 254 51-324 54-344 (476)
176 3frk_A QDTB; aminotransferase, 99.8 4E-18 1.4E-22 160.9 17.6 194 68-297 13-209 (373)
177 3i16_A Aluminum resistance pro 99.8 2.6E-17 8.8E-22 158.9 23.4 175 93-298 73-269 (427)
178 4e77_A Glutamate-1-semialdehyd 99.8 1.4E-18 4.9E-23 167.3 14.7 248 51-324 53-316 (429)
179 2e7u_A Glutamate-1-semialdehyd 99.8 1.3E-18 4.5E-23 167.3 13.6 240 51-324 52-314 (424)
180 3jzl_A Putative cystathionine 99.8 1.6E-17 5.6E-22 159.5 20.8 179 87-299 54-253 (409)
181 1z7d_A Ornithine aminotransfer 99.8 6.4E-18 2.2E-22 163.4 17.8 235 52-324 66-327 (433)
182 2epj_A Glutamate-1-semialdehyd 99.8 1.8E-18 6.2E-23 166.8 13.9 238 51-324 56-319 (434)
183 2oat_A Ornithine aminotransfer 99.8 1.6E-17 5.4E-22 161.0 20.3 219 70-324 93-338 (439)
184 3ffr_A Phosphoserine aminotran 99.8 3.6E-18 1.2E-22 159.5 13.9 148 121-298 64-214 (362)
185 1qgn_A Protein (cystathionine 99.8 4.2E-17 1.4E-21 158.3 21.7 166 95-298 116-286 (445)
186 3hvy_A Cystathionine beta-lyas 99.8 4.7E-17 1.6E-21 157.0 21.9 179 87-298 69-269 (427)
187 3n0l_A Serine hydroxymethyltra 99.8 6.6E-18 2.2E-22 161.3 15.3 154 121-298 91-250 (417)
188 3tfu_A Adenosylmethionine-8-am 99.8 6.5E-18 2.2E-22 164.6 15.4 235 70-324 92-354 (457)
189 3hmu_A Aminotransferase, class 99.8 1.9E-17 6.4E-22 162.0 18.4 253 51-324 55-340 (472)
190 3ju7_A Putative PLP-dependent 99.8 3.4E-17 1.2E-21 155.6 19.1 198 68-298 12-214 (377)
191 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.8 1.7E-17 5.9E-22 160.3 17.2 183 71-285 42-232 (437)
192 3nmy_A Xometc, cystathionine g 99.7 5E-17 1.7E-21 155.8 19.0 189 95-325 69-263 (400)
193 2ctz_A O-acetyl-L-homoserine s 99.7 3.2E-17 1.1E-21 157.9 17.5 184 68-286 30-221 (421)
194 3ri6_A O-acetylhomoserine sulf 99.7 5E-17 1.7E-21 157.2 17.7 157 94-286 83-243 (430)
195 3ecd_A Serine hydroxymethyltra 99.7 1.5E-17 5.2E-22 159.0 13.4 154 122-297 98-257 (425)
196 1w23_A Phosphoserine aminotran 99.7 1.4E-18 4.7E-23 162.7 5.9 191 53-285 4-208 (360)
197 2dgk_A GAD-beta, GADB, glutama 99.7 5E-17 1.7E-21 157.8 16.9 202 70-285 54-275 (452)
198 2fq6_A Cystathionine beta-lyas 99.7 8.8E-17 3E-21 154.8 18.2 165 95-298 84-255 (415)
199 1qz9_A Kynureninase; kynurenin 99.7 8.5E-17 2.9E-21 153.6 16.2 157 95-285 73-241 (416)
200 3h7f_A Serine hydroxymethyltra 99.7 3.8E-17 1.3E-21 158.6 13.0 212 52-298 46-270 (447)
201 2c0r_A PSAT, phosphoserine ami 99.7 6.8E-18 2.3E-22 158.6 7.6 171 121-324 71-253 (362)
202 2cjg_A L-lysine-epsilon aminot 99.7 2.7E-17 9.2E-22 159.7 11.7 246 52-324 55-346 (449)
203 3gbx_A Serine hydroxymethyltra 99.7 3.6E-16 1.2E-20 149.2 15.5 141 124-285 98-244 (420)
204 2z67_A O-phosphoseryl-tRNA(SEC 99.7 4.5E-16 1.5E-20 151.5 16.0 165 121-296 152-320 (456)
205 1rv3_A Serine hydroxymethyltra 99.7 2E-16 6.7E-21 155.2 12.9 206 51-286 44-269 (483)
206 1js3_A DDC;, DOPA decarboxylas 99.7 4.2E-16 1.4E-20 152.7 14.3 209 71-292 87-321 (486)
207 3e9k_A Kynureninase; kynurenin 99.7 8.7E-16 3E-20 149.4 15.0 168 95-285 113-290 (465)
208 2vi8_A Serine hydroxymethyltra 99.6 9.4E-16 3.2E-20 145.7 13.9 195 71-298 36-248 (405)
209 3b8x_A WBDK, pyridoxamine 5-ph 99.6 2.7E-15 9.3E-20 142.4 15.9 151 68-240 11-166 (390)
210 2x3l_A ORN/Lys/Arg decarboxyla 99.6 8.9E-16 3E-20 149.0 12.6 168 89-286 53-225 (446)
211 2vyc_A Biodegradative arginine 99.6 2.2E-15 7.6E-20 155.0 16.2 154 121-285 224-398 (755)
212 3vp6_A Glutamate decarboxylase 99.6 1.5E-15 5.1E-20 150.0 13.8 208 73-295 111-337 (511)
213 2okj_A Glutamate decarboxylase 99.6 4.7E-15 1.6E-19 145.9 15.3 193 87-294 122-333 (504)
214 3hbx_A GAD 1, glutamate decarb 99.6 6.9E-15 2.3E-19 144.9 16.3 202 69-285 67-290 (502)
215 1c4k_A Protein (ornithine deca 99.6 3.3E-15 1.1E-19 152.8 13.6 168 95-284 175-366 (730)
216 2qma_A Diaminobutyrate-pyruvat 99.6 3.5E-15 1.2E-19 146.6 12.2 206 68-291 110-342 (497)
217 2jis_A Cysteine sulfinic acid 99.6 4.4E-14 1.5E-18 139.4 15.7 188 87-290 138-343 (515)
218 2fyf_A PSAT, phosphoserine ami 99.5 6.6E-15 2.2E-19 140.2 8.5 160 95-296 80-243 (398)
219 2yky_A Beta-transaminase; tran 99.3 4.7E-16 1.6E-20 151.6 0.0 240 51-324 100-350 (465)
220 3n75_A LDC, lysine decarboxyla 99.5 8.3E-14 2.8E-18 141.6 15.5 168 95-286 197-381 (715)
221 2a7v_A Serine hydroxymethyltra 99.5 1.3E-13 4.6E-18 135.0 13.8 202 52-286 55-279 (490)
222 3ke3_A Putative serine-pyruvat 99.5 6.7E-13 2.3E-17 125.6 17.9 156 121-296 54-220 (379)
223 1ohv_A 4-aminobutyrate aminotr 99.5 1.2E-13 3.9E-18 135.1 10.2 249 51-324 63-369 (472)
224 1wyu_A Glycine dehydrogenase ( 99.5 4.4E-13 1.5E-17 129.4 13.3 155 96-285 111-274 (438)
225 4e1o_A HDC, histidine decarbox 99.4 5.1E-13 1.8E-17 130.7 13.0 207 72-292 93-327 (481)
226 3k40_A Aromatic-L-amino-acid d 99.4 4.2E-12 1.4E-16 124.1 13.4 207 73-292 89-320 (475)
227 3hl2_A O-phosphoseryl-tRNA(SEC 98.8 1.3E-07 4.5E-12 90.6 17.1 165 120-296 136-306 (501)
228 3bc8_A O-phosphoseryl-tRNA(SEC 98.7 1.3E-07 4.5E-12 91.0 14.7 167 121-297 119-289 (450)
229 4ao9_A Beta-phenylalanine amin 98.6 5.3E-07 1.8E-11 87.3 13.7 210 52-285 88-300 (454)
230 4atq_A 4-aminobutyrate transam 98.1 5.6E-05 1.9E-09 73.1 16.1 186 121-324 128-340 (456)
231 3e77_A Phosphoserine aminotran 97.9 1.6E-05 5.6E-10 75.0 6.2 156 96-285 61-219 (377)
232 3qm2_A Phosphoserine aminotran 97.8 2.1E-05 7.3E-10 74.4 6.4 159 93-285 72-234 (386)
233 3m5u_A Phosphoserine aminotran 97.8 0.00015 5.2E-09 67.9 12.1 160 96-296 53-214 (361)
234 4a0g_A Adenosylmethionine-8-am 97.8 3.3E-05 1.1E-09 80.2 7.9 127 184-324 577-716 (831)
235 4e3q_A Pyruvate transaminase; 97.6 0.0019 6.5E-08 62.6 17.3 191 121-324 131-358 (473)
236 3ou5_A Serine hydroxymethyltra 97.6 0.00026 9E-09 67.7 10.1 194 68-285 64-278 (490)
237 3gh5_A HEX1, beta-hexosaminida 77.8 23 0.00078 34.3 12.0 69 159-234 206-274 (525)
238 1jak_A Beta-N-acetylhexosamini 77.0 19 0.00066 34.7 11.3 26 209-234 224-249 (512)
239 4fgs_A Probable dehydrogenase 76.1 11 0.00038 33.2 8.7 95 123-224 33-133 (273)
240 1now_A Beta-hexosaminidase bet 76.0 11 0.00039 36.3 9.4 25 210-234 214-238 (507)
241 3guy_A Short-chain dehydrogena 72.6 29 0.001 28.8 10.3 94 123-223 5-101 (230)
242 2gjx_A Beta-hexosaminidase alp 63.9 9.6 0.00033 36.8 5.8 27 208-234 207-233 (507)
243 2yl5_A Beta-N-acetylhexosamini 61.4 6.5 0.00022 37.3 4.1 29 206-234 85-113 (442)
244 4a29_A Engineered retro-aldol 60.8 16 0.00055 31.9 6.1 79 146-235 81-159 (258)
245 1ofu_X SULA, hypothetical prot 59.1 56 0.0019 24.7 9.7 103 121-231 7-112 (119)
246 1i4n_A Indole-3-glycerol phosp 58.7 19 0.00064 31.3 6.3 80 146-236 78-157 (251)
247 1c7s_A Beta-N-acetylhexosamini 57.4 23 0.00078 36.5 7.5 27 208-234 392-418 (858)
248 4g81_D Putative hexonate dehyd 56.9 63 0.0022 27.8 9.5 95 122-223 12-115 (255)
249 2yl6_A Beta-N-acetylhexosamini 56.4 6.9 0.00024 37.0 3.3 29 206-234 82-110 (434)
250 3m1a_A Putative dehydrogenase; 55.2 93 0.0032 26.5 10.4 95 122-223 8-108 (281)
251 3rd5_A Mypaa.01249.C; ssgcid, 54.9 51 0.0017 28.5 8.7 93 122-222 19-112 (291)
252 3rwb_A TPLDH, pyridoxal 4-dehy 53.6 42 0.0014 28.4 7.7 95 122-223 9-109 (247)
253 1hjs_A Beta-1,4-galactanase; 4 48.9 20 0.00068 32.4 5.0 37 205-241 49-85 (332)
254 1fob_A Beta-1,4-galactanase; B 47.6 22 0.00075 32.1 5.1 74 158-241 12-85 (334)
255 3gem_A Short chain dehydrogena 46.9 1.3E+02 0.0044 25.5 9.9 91 123-223 31-127 (260)
256 3tsm_A IGPS, indole-3-glycerol 46.6 54 0.0019 28.7 7.3 58 169-236 119-176 (272)
257 3ppi_A 3-hydroxyacyl-COA dehyd 46.1 1.3E+02 0.0046 25.5 10.0 95 122-223 33-138 (281)
258 2o23_A HADH2 protein; HSD17B10 46.0 1.3E+02 0.0045 25.1 9.9 63 122-191 15-78 (265)
259 4eso_A Putative oxidoreductase 45.8 73 0.0025 26.9 8.1 94 123-223 12-111 (255)
260 3ozo_A N-acetylglucosaminidase 45.2 32 0.0011 33.6 6.1 25 210-234 250-274 (572)
261 3h7a_A Short chain dehydrogena 44.9 1.4E+02 0.0047 25.1 10.3 94 122-223 10-112 (252)
262 3tpc_A Short chain alcohol deh 44.3 61 0.0021 27.4 7.3 95 122-223 10-114 (257)
263 3gvc_A Oxidoreductase, probabl 43.9 61 0.0021 28.0 7.3 95 122-223 32-132 (277)
264 1pii_A N-(5'phosphoribosyl)ant 43.5 41 0.0014 31.9 6.4 79 146-235 85-163 (452)
265 2ya0_A Putative alkaline amylo 43.1 15 0.00051 37.1 3.5 35 205-242 247-281 (714)
266 4b79_A PA4098, probable short- 43.0 1.1E+02 0.0037 26.2 8.6 91 123-224 15-106 (242)
267 4fn4_A Short chain dehydrogena 42.8 73 0.0025 27.4 7.5 95 123-224 11-115 (254)
268 4dyv_A Short-chain dehydrogena 42.1 1.6E+02 0.0055 25.1 10.3 95 122-223 31-132 (272)
269 4gkb_A 3-oxoacyl-[acyl-carrier 40.8 1.2E+02 0.0039 26.1 8.5 95 122-224 10-112 (258)
270 1bqc_A Protein (beta-mannanase 39.4 74 0.0025 27.7 7.2 19 156-174 36-54 (302)
271 3l6e_A Oxidoreductase, short-c 39.1 70 0.0024 26.7 6.8 95 122-223 6-106 (235)
272 3tfo_A Putative 3-oxoacyl-(acy 39.1 99 0.0034 26.4 7.9 95 122-223 7-110 (264)
273 3grp_A 3-oxoacyl-(acyl carrier 39.0 73 0.0025 27.2 7.0 95 122-223 30-130 (266)
274 3rcn_A Beta-N-acetylhexosamini 38.4 18 0.00063 35.2 3.1 28 207-234 215-242 (543)
275 3qlj_A Short chain dehydrogena 38.0 1.1E+02 0.0039 26.8 8.3 95 122-223 30-143 (322)
276 3rih_A Short chain dehydrogena 37.9 1.5E+02 0.0051 25.7 8.9 95 122-223 44-148 (293)
277 4gqr_A Pancreatic alpha-amylas 37.3 23 0.00079 33.2 3.7 28 214-241 75-102 (496)
278 3ged_A Short-chain dehydrogena 37.0 1.4E+02 0.0047 25.5 8.4 94 123-224 6-105 (247)
279 4dqx_A Probable oxidoreductase 36.8 2E+02 0.0068 24.5 10.4 95 122-223 30-130 (277)
280 1yht_A DSPB; beta barrel, hydr 36.6 22 0.00074 32.7 3.2 25 210-234 89-113 (367)
281 2r8w_A AGR_C_1641P; APC7498, d 36.5 2.3E+02 0.008 25.3 10.6 81 128-236 116-196 (332)
282 4e6p_A Probable sorbitol dehyd 36.4 1.4E+02 0.0046 25.2 8.3 95 122-223 11-111 (259)
283 1o5k_A DHDPS, dihydrodipicolin 36.4 2.2E+02 0.0076 25.0 10.2 26 128-155 94-119 (306)
284 3bk2_A RNAse J, metal dependen 36.4 1.3E+02 0.0044 29.1 8.9 100 121-230 309-423 (562)
285 1hxh_A 3BETA/17BETA-hydroxyste 36.3 1.3E+02 0.0044 25.2 8.1 95 122-223 9-109 (253)
286 4hp8_A 2-deoxy-D-gluconate 3-d 35.7 1.5E+02 0.0053 25.3 8.4 94 122-224 12-109 (247)
287 2ojp_A DHDPS, dihydrodipicolin 35.7 1.9E+02 0.0063 25.3 9.2 25 197-223 129-153 (292)
288 2ya1_A Putative alkaline amylo 35.4 22 0.00076 37.4 3.4 28 215-242 561-588 (1014)
289 3pxx_A Carveol dehydrogenase; 35.3 73 0.0025 27.2 6.4 95 122-223 13-126 (287)
290 2qv5_A AGR_C_5032P, uncharacte 34.5 2.3E+02 0.0077 24.5 10.0 86 143-233 54-159 (261)
291 4ibo_A Gluconate dehydrogenase 34.0 1.8E+02 0.0061 24.7 8.8 95 122-223 29-132 (271)
292 3f9i_A 3-oxoacyl-[acyl-carrier 33.2 2E+02 0.007 23.6 9.2 65 122-193 17-82 (249)
293 3lyl_A 3-oxoacyl-(acyl-carrier 31.8 2.2E+02 0.0074 23.5 9.0 95 122-223 8-111 (247)
294 3op4_A 3-oxoacyl-[acyl-carrier 31.5 1.3E+02 0.0043 25.2 7.2 95 122-223 12-112 (248)
295 2ew8_A (S)-1-phenylethanol deh 31.5 1.9E+02 0.0066 23.9 8.4 95 122-223 10-111 (249)
296 4hv4_A UDP-N-acetylmuramate--L 30.9 2E+02 0.0068 27.2 9.2 44 122-168 27-70 (494)
297 4egf_A L-xylulose reductase; s 30.9 1.8E+02 0.0062 24.5 8.2 50 122-173 23-77 (266)
298 3gaf_A 7-alpha-hydroxysteroid 30.8 2.4E+02 0.0081 23.6 10.3 95 122-223 15-117 (256)
299 1lwj_A 4-alpha-glucanotransfer 29.6 45 0.0015 31.0 4.3 29 214-242 68-96 (441)
300 3imf_A Short chain dehydrogena 29.4 1.7E+02 0.0059 24.5 7.7 95 122-223 9-112 (257)
301 4es6_A Uroporphyrinogen-III sy 29.3 24 0.00082 30.2 2.1 58 143-201 5-64 (254)
302 3is3_A 17BETA-hydroxysteroid d 29.3 1.1E+02 0.0037 26.1 6.4 95 122-223 21-125 (270)
303 1ur4_A Galactanase; hydrolase, 29.2 2.5E+02 0.0085 25.9 9.2 30 213-242 86-115 (399)
304 3zv4_A CIS-2,3-dihydrobiphenyl 29.0 2.7E+02 0.0091 23.7 9.9 50 122-173 8-58 (281)
305 3fkr_A L-2-keto-3-deoxyarabona 28.9 3E+02 0.01 24.2 11.0 36 196-237 138-174 (309)
306 3t7c_A Carveol dehydrogenase; 28.8 2.3E+02 0.0077 24.4 8.6 95 122-223 31-147 (299)
307 1ht6_A AMY1, alpha-amylase iso 28.8 49 0.0017 30.5 4.3 29 214-242 67-95 (405)
308 2qq5_A DHRS1, dehydrogenase/re 28.6 2.3E+02 0.0077 23.7 8.4 62 122-190 8-73 (260)
309 1g94_A Alpha-amylase; beta-alp 28.6 37 0.0013 31.8 3.4 30 214-243 63-92 (448)
310 3sc4_A Short chain dehydrogena 28.6 2.5E+02 0.0085 23.9 8.8 95 122-223 12-122 (285)
311 2z1k_A (NEO)pullulanase; hydro 28.0 50 0.0017 31.0 4.3 29 214-242 95-123 (475)
312 3n74_A 3-ketoacyl-(acyl-carrie 27.2 2.7E+02 0.0092 23.1 10.3 95 122-223 12-113 (261)
313 1hdc_A 3-alpha, 20 beta-hydrox 27.1 2.7E+02 0.0093 23.1 8.6 95 122-223 8-108 (254)
314 4aie_A Glucan 1,6-alpha-glucos 27.0 52 0.0018 31.3 4.3 29 214-242 78-106 (549)
315 1wza_A Alpha-amylase A; hydrol 26.9 55 0.0019 30.9 4.4 29 214-242 80-108 (488)
316 2hmc_A AGR_L_411P, dihydrodipi 26.7 2.1E+02 0.0073 25.7 8.1 81 128-236 105-187 (344)
317 4fc7_A Peroxisomal 2,4-dienoyl 26.7 2.1E+02 0.0071 24.3 7.9 95 122-223 30-134 (277)
318 1oft_A SULA, hypothetical prot 26.7 2.4E+02 0.0083 22.4 11.5 98 126-231 54-154 (161)
319 1gcy_A Glucan 1,4-alpha-maltot 26.3 55 0.0019 31.4 4.3 29 214-242 91-119 (527)
320 1ud2_A Amylase, alpha-amylase; 26.2 46 0.0016 31.4 3.7 29 214-242 79-107 (480)
321 1mxg_A Alpha amylase; hyperthe 26.1 59 0.002 30.3 4.3 29 214-242 85-113 (435)
322 3dgp_A RNA polymerase II trans 26.0 70 0.0024 22.5 3.6 29 213-241 30-58 (80)
323 3zq4_A Ribonuclease J 1, RNAse 25.9 2.4E+02 0.0083 27.1 8.9 99 121-230 294-408 (555)
324 3tzq_B Short-chain type dehydr 25.9 3E+02 0.01 23.2 11.4 95 122-223 14-116 (271)
325 3uve_A Carveol dehydrogenase ( 25.8 1.3E+02 0.0045 25.6 6.4 95 122-223 14-134 (286)
326 4imr_A 3-oxoacyl-(acyl-carrier 25.8 3E+02 0.01 23.3 10.2 97 122-223 36-138 (275)
327 2guy_A Alpha-amylase A; (beta- 25.7 54 0.0018 30.9 4.0 29 214-242 96-124 (478)
328 3tsc_A Putative oxidoreductase 25.7 1.5E+02 0.0052 25.1 6.8 95 122-223 14-130 (277)
329 2uvd_A 3-oxoacyl-(acyl-carrier 25.6 2.8E+02 0.0096 22.8 8.5 95 122-223 7-111 (246)
330 3sju_A Keto reductase; short-c 25.6 2.3E+02 0.008 24.0 8.0 95 122-223 27-130 (279)
331 1jae_A Alpha-amylase; glycosid 25.3 50 0.0017 31.1 3.7 30 214-243 73-102 (471)
332 3bh4_A Alpha-amylase; calcium, 25.2 49 0.0017 31.2 3.7 29 214-242 77-105 (483)
333 1wpc_A Glucan 1,4-alpha-maltoh 25.1 49 0.0017 31.2 3.7 29 214-242 81-109 (485)
334 2nu8_A Succinyl-COA ligase [AD 25.0 1.3E+02 0.0045 26.2 6.3 47 183-238 78-124 (288)
335 4dmm_A 3-oxoacyl-[acyl-carrier 25.0 1.5E+02 0.005 25.2 6.5 95 122-223 31-135 (269)
336 2aaa_A Alpha-amylase; glycosid 24.9 54 0.0018 31.0 3.9 29 214-242 96-124 (484)
337 1ua7_A Alpha-amylase; beta-alp 24.8 51 0.0017 30.5 3.6 30 214-243 73-102 (422)
338 1i4n_A Indole-3-glycerol phosp 24.7 2.2E+02 0.0076 24.4 7.5 78 145-234 125-207 (251)
339 3nyw_A Putative oxidoreductase 24.4 3E+02 0.01 22.8 9.3 95 122-223 10-115 (250)
340 1wcw_A Uroporphyrinogen III sy 24.3 53 0.0018 28.0 3.4 60 143-205 7-68 (261)
341 2fcj_A Small toprim domain pro 24.3 31 0.001 26.3 1.6 28 210-238 34-61 (119)
342 1hvx_A Alpha-amylase; hydrolas 24.2 52 0.0018 31.4 3.7 29 214-242 80-108 (515)
343 1uls_A Putative 3-oxoacyl-acyl 24.1 2.1E+02 0.0071 23.7 7.2 93 122-223 8-106 (245)
344 3v2g_A 3-oxoacyl-[acyl-carrier 23.6 2.4E+02 0.0084 23.8 7.7 95 122-223 34-138 (271)
345 2dh2_A 4F2 cell-surface antige 23.5 67 0.0023 29.8 4.2 29 214-242 80-108 (424)
346 3kux_A Putative oxidoreductase 23.5 2.4E+02 0.0081 25.0 7.9 17 145-161 69-85 (352)
347 3zxy_A Subtilisin-like protein 23.4 62 0.0021 28.0 3.7 69 165-234 73-142 (282)
348 1xky_A Dihydrodipicolinate syn 23.1 1.1E+02 0.0038 27.0 5.4 79 128-235 94-173 (301)
349 3zu3_A Putative reductase YPO4 23.1 4.5E+02 0.015 24.3 10.4 13 212-224 189-201 (405)
350 1vli_A Spore coat polysacchari 22.8 4.4E+02 0.015 24.1 10.5 89 129-234 101-192 (385)
351 1vl8_A Gluconate 5-dehydrogena 22.8 2.9E+02 0.0099 23.2 8.0 95 122-223 24-128 (267)
352 2wc7_A Alpha amylase, catalyti 22.6 56 0.0019 30.9 3.5 28 215-242 102-129 (488)
353 3bzy_B ESCU; auto cleavage pro 22.3 53 0.0018 23.2 2.4 22 216-237 27-48 (83)
354 3rkr_A Short chain oxidoreduct 22.3 3.4E+02 0.012 22.6 10.6 94 122-223 32-136 (262)
355 1spx_A Short-chain reductase f 22.3 2.5E+02 0.0085 23.6 7.5 29 122-152 9-38 (278)
356 3oec_A Carveol dehydrogenase ( 22.2 3.1E+02 0.01 23.8 8.2 95 122-223 49-164 (317)
357 1j0h_A Neopullulanase; beta-al 22.2 73 0.0025 31.0 4.3 29 214-242 221-249 (588)
358 1jr2_A Uroporphyrinogen-III sy 22.2 52 0.0018 28.6 2.9 60 143-205 20-85 (286)
359 1wzl_A Alpha-amylase II; pullu 22.1 69 0.0024 31.1 4.1 29 214-242 218-246 (585)
360 2cc0_A Acetyl-xylan esterase; 21.8 1.7E+02 0.0057 23.6 6.0 67 159-232 112-179 (195)
361 3lf2_A Short chain oxidoreduct 21.8 3.3E+02 0.011 22.7 8.2 95 122-223 11-116 (265)
362 3sx2_A Putative 3-ketoacyl-(ac 21.7 3.1E+02 0.011 23.0 8.0 93 122-223 16-127 (278)
363 2wqp_A Polysialic acid capsule 21.6 4.5E+02 0.015 23.7 9.6 88 129-233 91-180 (349)
364 2c07_A 3-oxoacyl-(acyl-carrier 21.6 3.7E+02 0.013 22.7 8.6 94 122-222 47-149 (285)
365 3i16_A Aluminum resistance pro 21.6 26 0.00087 32.9 0.8 14 92-105 98-111 (427)
366 3s55_A Putative short-chain de 21.4 3.6E+02 0.012 22.6 8.6 95 122-223 13-128 (281)
367 1f2d_A 1-aminocyclopropane-1-c 21.4 4.2E+02 0.014 23.3 10.0 17 157-173 118-134 (341)
368 3u5t_A 3-oxoacyl-[acyl-carrier 21.4 2.7E+02 0.0092 23.5 7.5 95 122-223 30-134 (267)
369 1zja_A Trehalulose synthase; s 21.3 78 0.0027 30.5 4.3 29 214-242 78-106 (557)
370 3dhu_A Alpha-amylase; structur 21.1 67 0.0023 29.9 3.7 29 214-242 82-110 (449)
371 3edm_A Short chain dehydrogena 21.1 3.6E+02 0.012 22.4 10.9 95 122-223 11-116 (259)
372 2jah_A Clavulanic acid dehydro 20.9 3.5E+02 0.012 22.2 9.1 95 122-223 10-113 (247)
373 3pgx_A Carveol dehydrogenase; 20.7 1.9E+02 0.0065 24.5 6.4 95 122-223 18-134 (280)
374 3kvo_A Hydroxysteroid dehydrog 20.7 4.4E+02 0.015 23.3 11.7 95 122-223 48-158 (346)
375 1m53_A Isomaltulose synthase; 20.5 83 0.0028 30.5 4.3 29 214-242 91-119 (570)
376 2x9g_A PTR1, pteridine reducta 20.5 2.6E+02 0.009 23.7 7.3 50 122-173 26-81 (288)
377 3hvy_A Cystathionine beta-lyas 20.3 28 0.00096 32.6 0.8 13 92-104 99-111 (427)
378 3jug_A Beta-mannanase; TIM-bar 20.2 79 0.0027 28.6 3.8 76 158-234 60-143 (345)
379 1uok_A Oligo-1,6-glucosidase; 20.0 87 0.003 30.2 4.3 29 214-242 77-105 (558)
No 1
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=2.1e-58 Score=444.64 Aligned_cols=312 Identities=29% Similarity=0.550 Sum_probs=271.3
Q ss_pred cccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh--cCcCCCCCCCCCCCHHHHH
Q 047180 23 MSSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI--AGTANMEYLPMGGSVKMVE 100 (337)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~--~~~~~~~Y~~~~G~~~lr~ 100 (337)
|.|+|++++..++++++++.+.++++..+++|||++|.|.++++++++++.+++|.+ + +....++|+|..|.++||+
T Consensus 1 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~ 79 (405)
T 3k7y_A 1 MDKLLSSLENIEVDNILKTAREFKEDTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFST 79 (405)
T ss_dssp CCCGGGGCCCCCCCHHHHHHHHHTTSSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHH
T ss_pred CcchhhcCCCCCCChHHHHHHHHhcCCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHH
Confidence 668899999999999999999999888889999999998888887888999999876 5 3345679999999999999
Q ss_pred HHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCC
Q 047180 101 ETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKG 180 (337)
Q Consensus 101 aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~ 180 (337)
++++|+++++.+.++++++++++|.|+++|+.++++++..+.| |+|++++|+|++|..+++.+|++++.+|+.++++++
T Consensus 80 aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~ 158 (405)
T 3k7y_A 80 LTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLID 158 (405)
T ss_dssp HHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTE
T ss_pred HHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCC
Confidence 9999998887666667777778999999999999988876557 999999999999999999999999999985555699
Q ss_pred CChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcC
Q 047180 181 LDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDG 260 (337)
Q Consensus 181 ~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~ 260 (337)
+|++.+++++.+.+++++++++|+||||||.++|+++|++|+++|++|+++||+||+|.+|.+++...+..+++.+...+
T Consensus 159 ~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~ 238 (405)
T 3k7y_A 159 INYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKN 238 (405)
T ss_dssp ECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTT
T ss_pred cCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcC
Confidence 99999999997644456778777779999999999999999999999999999999999998753323344555565556
Q ss_pred CeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhhh
Q 047180 261 HLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKEV 336 (337)
Q Consensus 261 ~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~el 336 (337)
+++++++||||+|||+|||+||++++.+++++++++.+++..+.+..|++++.++|.++..+|+++++.++|.+++
T Consensus 239 ~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l 314 (405)
T 3k7y_A 239 IAFSVCQSFSKNMSLYGERAGALHIVCKNQEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKEL 314 (405)
T ss_dssp CCEEEEEECTTTSCCTTTTEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CcEEEEeeCCccCCCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 7999999999999999999999987778899888888888877777888899999999999999988888887665
No 2
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=2.8e-58 Score=444.97 Aligned_cols=313 Identities=43% Similarity=0.732 Sum_probs=273.7
Q ss_pred ccccccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHH
Q 047180 20 ARWMSSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKM 98 (337)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~l 98 (337)
+|...+.|++++..|+++|+.+.+.+++++++ +|||++|.|.+++|+|+++++|++|.+.+ +.+..++|.|..|+++|
T Consensus 14 ~m~~~~~~~~v~~~p~d~i~~l~~~~~~d~~~-kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~l 92 (420)
T 4h51_A 14 AMTTAERWQKIQAQAPDVIFDLAKRAAAAKGP-KANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPF 92 (420)
T ss_dssp -CCHHHHHHTCCCCCCCHHHHHHHHHHHCCSS-CEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHH
T ss_pred hhhhhHHHhCCCCCCCChHHHHHHHHhcCCCC-CEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHH
Confidence 34445668999999999999999999999876 99999999999999999999999998876 55556789999999999
Q ss_pred HHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh--CCCCeEEEcCCCCcchHHHHHhcCce-eeEeeecc
Q 047180 99 VEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF--HPDSQIYIPVPTWSNHHNIWRDAHVT-QRTFHYYH 175 (337)
Q Consensus 99 r~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~--~pgd~Vlv~~P~y~~y~~~~~~~G~~-~~~~~~~~ 175 (337)
|+++++++++.+. ..+++..++|.||++|+..++.++.+. .|||+|++++|+|++|..+++.+|++ +..+++++
T Consensus 93 r~aia~~~~g~~~---~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~ 169 (420)
T 4h51_A 93 IDEAVKIIYGNTV---ELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYD 169 (420)
T ss_dssp HHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEE
T ss_pred HHHHHHHhcCCCc---cccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccc
Confidence 9999999988753 345666789999999999988777653 38999999999999999999999998 45666666
Q ss_pred CCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHH
Q 047180 176 PGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRI 255 (337)
Q Consensus 176 ~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~ 255 (337)
++++++|++.+.+.+...+++++++++|+||||||.++|+++|++|+++|+++++++|+||+|++|.+++.+.+...++.
T Consensus 170 ~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~ 249 (420)
T 4h51_A 170 PKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARL 249 (420)
T ss_dssp GGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred ccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHh
Confidence 66788999999998887777788888899999999999999999999999999999999999999998754444445555
Q ss_pred hhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 256 FLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 256 ~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
+.+.+.++++++||||+|+|+|||+||++++..+.+...++.+++..+.+..+++++.++|.++..+|+++.+..+|.++
T Consensus 250 ~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~ 329 (420)
T 4h51_A 250 FARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTKRADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAE 329 (420)
T ss_dssp HHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred HHhhCceEEEEeccccccccccCceEEEEecccCHHHHHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHH
Confidence 66667899999999999999999999999998999988999999998899999999999999999999999999999987
Q ss_pred h
Q 047180 336 V 336 (337)
Q Consensus 336 l 336 (337)
+
T Consensus 330 ~ 330 (420)
T 4h51_A 330 L 330 (420)
T ss_dssp H
T ss_pred H
Confidence 6
No 3
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=6.8e-49 Score=382.74 Aligned_cols=314 Identities=40% Similarity=0.689 Sum_probs=260.0
Q ss_pred ccccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhc---CcCCCCCCCCCCCHHH
Q 047180 22 WMSSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIA---GTANMEYLPMGGSVKM 98 (337)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~---~~~~~~Y~~~~G~~~l 98 (337)
-|||+|++++..++++++.+.+.++++..+.+|||++|.|.+.++.+++.++++++++++. ....++|.+..|.++|
T Consensus 20 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~l 99 (448)
T 3meb_A 20 GSMSVFSGFPASPPDAILNLTVLYNADTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLF 99 (448)
T ss_dssp --CCTTTTCCCCCCCTTHHHHHHHHHCCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHH
T ss_pred chhhHHhcCCCCCCChHHHHHHHHHhCCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHH
Confidence 3779999999999999999999999998888999999999777777788899999876652 3456789999999999
Q ss_pred HHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH----hcCceeeEeeec
Q 047180 99 VEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR----DAHVTQRTFHYY 174 (337)
Q Consensus 99 r~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~----~~G~~~~~~~~~ 174 (337)
|+++++|+++.....+++++|.+++|.||++++.+++.++..+.|||+|++++|+|++|...++ ..|++++.+|+.
T Consensus 100 r~~ia~~l~g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~ 179 (448)
T 3meb_A 100 LEAAQFLMFGKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYL 179 (448)
T ss_dssp HHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCB
T ss_pred HHHHHHHhcCCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEecc
Confidence 9999999977654434456764455999999999865444444499999999999999999999 999999999986
Q ss_pred cCC-CCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 175 HPG-TKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 175 ~~~-~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
+++ ++++|++.+++++++.+.+++++++|+||||||.+++.++|++|+++|+++|+++|+||+|.+|.+++.+.+..++
T Consensus 180 ~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~ 259 (448)
T 3meb_A 180 RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAV 259 (448)
T ss_dssp CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHH
T ss_pred ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhH
Confidence 554 5899999999999865445677777999999999999999999999999999999999999999865322233455
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeee--------CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC--------EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~--------~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
..+...+.++++++||||+||++|+|+||+.+.+ ++++.++.+.+++....+..+++++.++|.++..+|++
T Consensus 260 ~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~ 339 (448)
T 3meb_A 260 RMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHD 339 (448)
T ss_dssp HHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTS
T ss_pred HHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcC
Confidence 5555556789999999999999999999984444 45666667777777777788889999999999999999
Q ss_pred HHHHHHHHhh
Q 047180 326 AELKKLWLKE 335 (337)
Q Consensus 326 ~~~~~~w~~e 335 (337)
+++.++|.++
T Consensus 340 ~~l~~~~~~~ 349 (448)
T 3meb_A 340 KRLLQMFYDN 349 (448)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHH
Confidence 8888888544
No 4
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=2.2e-48 Score=375.43 Aligned_cols=310 Identities=39% Similarity=0.712 Sum_probs=257.5
Q ss_pred cccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHH
Q 047180 23 MSSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEE 101 (337)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~a 101 (337)
||++|+++...++++++.+...++++..+++|||++|.+.++++.+++++.+.+|+.+. .....++|++..|.++||++
T Consensus 21 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~G~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 100 (420)
T 4f4e_A 21 SMSLFSAVELAPRDPILGLNEAFNADTRPTKVNLGVGVYTNEDGKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDAS 100 (420)
T ss_dssp -CCTTTTCCCCCCCHHHHHHHHHHHCCCSSCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHHH
T ss_pred ccCHhhcCCcCCCChHHHHHHHHHhcCCCCcEEeeeeeeECCCCCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHHH
Confidence 67899999999999999999988888778899999998776677677778999887764 44346789999999999999
Q ss_pred HHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCC
Q 047180 102 TLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGL 181 (337)
Q Consensus 102 ia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~ 181 (337)
+++++.+.+...++++++++++|+|+++++.++++++....|||+|++++|+|++|...++..|++++.+|+.+++++++
T Consensus 101 ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 180 (420)
T 4f4e_A 101 VQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNGV 180 (420)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTEE
T ss_pred HHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCcc
Confidence 99999877654445664457899999999999965444344999999999999999999999999999999854456899
Q ss_pred ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCC
Q 047180 182 DFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGH 261 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 261 (337)
|++.+++.+++.+++++++++|+||||||.+++.++|++|+++|+++|++||+||+|.+|.++ .+.+..++..+....+
T Consensus 181 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~-~~~~~~~~~~~~~~~~ 259 (420)
T 4f4e_A 181 NFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGES-IEADAAAVRLFAAANL 259 (420)
T ss_dssp CHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSC-TTGGGHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCC-cchhhHHHHHHHhcCC
Confidence 999999999754445567777999999999999999999999999999999999999999864 2223345555555567
Q ss_pred eEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 262 LLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 262 ~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
++++++||||+||++|||+||++++.++++.++++...+....+..+++++.++|.++..+|+++.+.++|.
T Consensus 260 ~~i~~~S~SK~~~~~G~RiG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 331 (420)
T 4f4e_A 260 NVFVSSSFSKSFSLYGERVGALSIITDSKDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWV 331 (420)
T ss_dssp CEEEEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHH
T ss_pred CEEEEEeCCccCcCcCCCcEEEEEEcCCHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHH
Confidence 899999999999999999999987667888877777777766667788889999999999999976655443
No 5
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=4.2e-48 Score=370.49 Aligned_cols=312 Identities=54% Similarity=0.931 Sum_probs=256.7
Q ss_pred ccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHH
Q 047180 24 SSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEET 102 (337)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~ai 102 (337)
+|+|++++..++++++++.+.++.+..+++|||++|.|.+..+.+++.+.+++++.++ ......+|++..|.++||+++
T Consensus 1 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 80 (401)
T 7aat_A 1 SSWWSHVEMGPPDPILGVTEAFKRDTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRAS 80 (401)
T ss_dssp CCSSTTCCCCCCCHHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred CChhhcCCCCCCChhHHHHHHHhhCCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHH
Confidence 3679999999999999999999988888899999999865555566677888887765 333567899999999999999
Q ss_pred HHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-CCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCC
Q 047180 103 LKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF-HPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGL 181 (337)
Q Consensus 103 a~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~-~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~ 181 (337)
++|+.++++..+++++|.++.|.||++++.+++.++..+ .|||+|++++|+|+.|...++..|++++.+|+.+++++++
T Consensus 81 a~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 160 (401)
T 7aat_A 81 AELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSL 160 (401)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEE
T ss_pred HHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCcc
Confidence 999987766666677764445999999999988766522 2899999999999999999999999999999865556899
Q ss_pred ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCC
Q 047180 182 DFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGH 261 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 261 (337)
|++.+++.+++.++++.++++|+||||||.+++.+++++|+++|++||++||+||+|.+|.+++...+..++..+....+
T Consensus 161 d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~ 240 (401)
T 7aat_A 161 DFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGI 240 (401)
T ss_dssp CHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTC
T ss_pred CHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCC
Confidence 99999888875444556677799999999999999999999999999999999999999986421112233444445567
Q ss_pred eEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 262 LLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 262 ~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
++++++||||.||++|+|+||++++.++++..+.+...+....+..+.+++.++|.++..+++++++.+.|.++
T Consensus 241 ~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 314 (401)
T 7aat_A 241 DVVLSQSYAKNMGLYGERAGAFTVICRDAEEAKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVE 314 (401)
T ss_dssp CCEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred cEEEEecCCcccccccCceEEEEEEeCCHHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHH
Confidence 99999999999999999999999877788877777777777666677788899999999999988776666543
No 6
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2.9e-46 Score=359.08 Aligned_cols=307 Identities=44% Similarity=0.762 Sum_probs=234.5
Q ss_pred cccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHH
Q 047180 25 SWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLK 104 (337)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~ 104 (337)
++|++++..++++++++.+.++++..+++|||++|.|.+..+.+.+.++++++ .....++|.+..|.++||+++++
T Consensus 15 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~v~~a~~~a----~~~~~~~y~~~~g~~~lr~~ia~ 90 (409)
T 4eu1_A 15 QTQGPGSMGKPDPILGLGQDFRMDPAKRKVNLSIGVYRDDADQPFVLECVKQA----TLGTNMDYAPVTGIASFVEEAQK 90 (409)
T ss_dssp ------------CHHHHHHHHHHCCCSSCEECCCSSCCCTTSCCCCCHHHHTC----CCCSCCCCCCTTCCHHHHHHHHH
T ss_pred hHhhcCCCCCCChHHHHHHHHhhCCCcCceeeeeeEEECCCCCEeecHHHHhc----CccccccCCCCCCcHHHHHHHHH
Confidence 56999999999999999999998888899999999875443334444444433 33456789999999999999999
Q ss_pred HHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-CCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCCh
Q 047180 105 LAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF-HPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDF 183 (337)
Q Consensus 105 ~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~-~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~ 183 (337)
|+++.+...+++++|..++|.||++++.++..++..+ .+||+|++++|+|+.|...++..|++++.+|+.+++++++|+
T Consensus 91 ~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 170 (409)
T 4eu1_A 91 LCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGLNL 170 (409)
T ss_dssp HHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEECH
T ss_pred HHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcCcH
Confidence 9977665444466765567999999999876555433 388999999999999999999999999999985555789999
Q ss_pred HHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeE
Q 047180 184 AALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLL 263 (337)
Q Consensus 184 ~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
+.+++.+++.+.+++++++|+||||||.+++.+++++|+++|+++|++||+||+|.+|.+++...+..++..+....+++
T Consensus 171 ~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (409)
T 4eu1_A 171 AGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNL 250 (409)
T ss_dssp HHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCC
T ss_pred HHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcE
Confidence 99999997544456677779999999999999999999999999999999999999998642111123344444455789
Q ss_pred EEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 264 GLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 264 i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
++++||||+||++|+|+||+++..++++.++.+.+.+....+..+.+++.++|.++..+|+++++.++|.++
T Consensus 251 i~~~S~SK~~g~~G~riG~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 322 (409)
T 4eu1_A 251 IVAQSFSKNFGLYGHRCGALHISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKE 322 (409)
T ss_dssp EEEEECTTTSSCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred EEEecCcccccCccCCceEEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHH
Confidence 999999999999999999983333678877777777776666677888999999999999998776777443
No 7
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=6.7e-45 Score=347.26 Aligned_cols=306 Identities=40% Similarity=0.696 Sum_probs=250.9
Q ss_pred ccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-h-cCcCCCCCCCCCCCHHHHHHHH
Q 047180 26 WWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-I-AGTANMEYLPMGGSVKMVEETL 103 (337)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~-~~~~~~~Y~~~~G~~~lr~aia 103 (337)
+|++++..++++++.+...++.+..+++|||++|.|.+.++.++.++.+.+++.+ . .....++|++..|.+++|++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la 80 (397)
T 3fsl_A 1 MFQKVDAYAGDPILTLMERFKEDPRSDKVNLSIGLYYNEDGIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAIA 80 (397)
T ss_dssp CCTTCCCCCCCHHHHHHHHHHTCCCSCCEECSSCCCCCTTSCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHHH
T ss_pred CcccCCCCCCCchhhHHHHHhcCCCCCeEEEeeeEEECCCCCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHHH
Confidence 3788999999999999999998888899999999876666666666889888766 5 4334678999899999999999
Q ss_pred HHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCCh
Q 047180 104 KLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDF 183 (337)
Q Consensus 104 ~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~ 183 (337)
+++.+.+...++++++.+++|+|+++++.++++++....|||+|++++|+|+.|...++..|++++.+|+.+++++++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 160 (397)
T 3fsl_A 81 PLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVRF 160 (397)
T ss_dssp HHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEECH
T ss_pred HHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCcH
Confidence 99977665444566334689999999999986544433489999999999999999999999999999985444688999
Q ss_pred HHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeE
Q 047180 184 AALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLL 263 (337)
Q Consensus 184 ~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
+.+++.+.+.+.++.++++|+||||||.+++.+++++|+++|+++|++||+||+|.+|.++ ......++..+....+++
T Consensus 161 ~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~~ 239 (397)
T 3fsl_A 161 NDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAG-MEEDAYAIRAIASAGLPA 239 (397)
T ss_dssp HHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSC-TTGGGHHHHHHHHTTCCE
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccC-cccccHHHHHHHhcCCCE
Confidence 9999999754345677777999999999999999999999999999999999999999864 112234444454556789
Q ss_pred EEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHH
Q 047180 264 GLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLW 332 (337)
Q Consensus 264 i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w 332 (337)
++++||||.||++|+|+||++++.++++.++++...+....+..+++++.++|.++..+|.+..+.++|
T Consensus 240 i~~~S~SK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 308 (397)
T 3fsl_A 240 LVSNSFSKIFSLYGERVGGLSVMCEDAEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASW 308 (397)
T ss_dssp EEEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHH
T ss_pred EEEecccccccCcCCCeeEEEEecCCHHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHH
Confidence 999999999999999999998776788877777776666556677888999999999999987654433
No 8
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=8e-43 Score=335.17 Aligned_cols=305 Identities=41% Similarity=0.750 Sum_probs=238.3
Q ss_pred ccccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-h-cCcCCCCCCCCCCCHHHHHH
Q 047180 24 SSWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-I-AGTANMEYLPMGGSVKMVEE 101 (337)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~-~~~~~~~Y~~~~G~~~lr~a 101 (337)
||+|+++...++++++.+...+++..++++|||+.|.+.+.++.+++++.+.+++.+ . .....++|.+..|.++||++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ 81 (412)
T 1yaa_A 2 ATLFNNIELLPPDALFGIKQRYGQDQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSN 81 (412)
T ss_dssp TTTTTTCCCCCCCTTHHHHHHHHTCCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHH
T ss_pred cchhccCcccCCCcHHHHHHHHhcCCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHH
Confidence 357899999999999999988887766789999999987666766778889988876 5 33345689888999999999
Q ss_pred HHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCC
Q 047180 102 TLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGL 181 (337)
Q Consensus 102 ia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~ 181 (337)
+++|+.+.++..+++++|.+++|.||++++.+++.++..+.|||+|++++|+|+.|...++..|++++.+|+.+++++++
T Consensus 82 ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 161 (412)
T 1yaa_A 82 AAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSL 161 (412)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEE
T ss_pred HHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCcc
Confidence 99999765554455666532239999999998865444344899999999999999999999999999999733336889
Q ss_pred ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCC
Q 047180 182 DFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGH 261 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 261 (337)
|++.+++.+.+.+..++++++|+||||||.+++.+++++|+++|+++|++||+||+|.+|.++.......++..+....+
T Consensus 162 d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (412)
T 1yaa_A 162 DLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLS 241 (412)
T ss_dssp CHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTT
T ss_pred CHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCC
Confidence 99999999875433456666699999999999999999999999999999999999999975410001223433433445
Q ss_pred ---eEEEEecccccccccccccceeEeee----CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHH
Q 047180 262 ---LLGLAQSYAKNMGLYGQRVGCLSVLC----EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAEL 328 (337)
Q Consensus 262 ---~~i~~~S~SK~~~~~G~RvG~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 328 (337)
++++++||||.||++|+|+||+++.. ++++.++.+.+++....+..+++++.++|.++..+|++.++
T Consensus 242 ~~~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~ 315 (412)
T 1yaa_A 242 TVSPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPEL 315 (412)
T ss_dssp TTCCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHH
T ss_pred CCcceEEEeccCCCCCCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHH
Confidence 89999999999999999999997222 14553444555555545566777889999999999998753
No 9
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.6e-42 Score=330.63 Aligned_cols=301 Identities=39% Similarity=0.711 Sum_probs=223.2
Q ss_pred ccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHH
Q 047180 26 WWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLK 104 (337)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~ 104 (337)
+|+++...++++++.+...++....++.|||+.|.+.+.++.+++++.+.+++.+. .....++|.+..|.++||+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (396)
T 2q7w_A 1 MFENITAAPADPILGLADLFRADERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE 80 (396)
T ss_dssp -CTTCCCCCC-----------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred CccccccCCCchHHHHHHHHhccCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHH
Confidence 37788888888888887777665556789999998765555556778888887664 32245689888999999999999
Q ss_pred HHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChH
Q 047180 105 LAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFA 184 (337)
Q Consensus 105 ~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~ 184 (337)
|+.+.+...+++++|.+++|+||++++.+++.++..+.|||+|++++|+|+.|...++..|++++.+|+..++++++|++
T Consensus 81 ~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 160 (396)
T 2q7w_A 81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHH
Confidence 99766544345666532249999999999987665444899999999999999999999999999999843346889999
Q ss_pred HHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEE
Q 047180 185 ALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLG 264 (337)
Q Consensus 185 ~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 264 (337)
.+++.+.+.+.+++++++|+||||||.+++.+++++|+++|+++|++||+||+|.+|.++. .....++..+....++++
T Consensus 161 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~i 239 (396)
T 2q7w_A 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGL-EEDAEGLRAFAAMHKELI 239 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCH-HHHTHHHHHHHHHCSCEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCc-cchhHHHHHHHhcCCcEE
Confidence 9999987543335666679999999999999999999999999999999999999997531 001223444444456899
Q ss_pred EEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 265 LAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 265 ~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
+++||||.||++|+|+||+++.+++++.++.+...+....+..+++++.++|.++..+|++.+
T Consensus 240 ~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 302 (396)
T 2q7w_A 240 VASSYSXNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVATILSNDA 302 (396)
T ss_dssp EEEECTTTTTCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHH
T ss_pred EEEeccccccccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChh
Confidence 999999999999999999985334676556666666654556677779999999999999863
No 10
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=3.1e-42 Score=330.88 Aligned_cols=303 Identities=46% Similarity=0.780 Sum_probs=239.7
Q ss_pred cccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhc--CcCCCCCCCCCCCHHHHHHH
Q 047180 25 SWWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIA--GTANMEYLPMGGSVKMVEET 102 (337)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~--~~~~~~Y~~~~G~~~lr~ai 102 (337)
++|+++...+++++..+.+.+++..+++.|||+.|.+.+.++.+.+++.+.+++.+.. ....++|.+..|.++||+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 4 SVFAEVPQAQPVLVFKLIADFREDPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp CTTTTCCCCCCCHHHHHHHHHHTCCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred chhhhCcccCCchHHHHHHHHhhcCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence 4688899999999999998887766678999999987655555667788998887652 23456898889999999999
Q ss_pred HHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCC-----CeEEEcCCCCcchHHHHHhcCce-eeEeeeccC
Q 047180 103 LKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPD-----SQIYIPVPTWSNHHNIWRDAHVT-QRTFHYYHP 176 (337)
Q Consensus 103 a~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg-----d~Vlv~~P~y~~y~~~~~~~G~~-~~~~~~~~~ 176 (337)
++|+.+.++..+++++|.+++|+||++|+.+++.++..+.|| |+|++++|+|+.|...++..|++ ++.+|+..+
T Consensus 84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 163 (412)
T 1ajs_A 84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT 163 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence 999976655444566653223999999999987544433489 99999999999999999999999 999997433
Q ss_pred CCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHh
Q 047180 177 GTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIF 256 (337)
Q Consensus 177 ~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 256 (337)
+++++|++.+++.+.+.+.+.+++++|+||||||.+++.+++++|+++|+++|++||+||+|.+|.++.......++..+
T Consensus 164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 243 (412)
T 1ajs_A 164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243 (412)
T ss_dssp TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence 46889999999988754334566666999999999999999999999999999999999999999753100012234434
Q ss_pred hhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 257 LKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 257 ~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
....++++++.||||.||++|+|+||++++.++++.++.+..++....+..+++++.++|.++..+|++.+
T Consensus 244 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 314 (412)
T 1ajs_A 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPE 314 (412)
T ss_dssp HHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHH
T ss_pred hccCCcEEEEEecccccCCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcc
Confidence 44457899999999999999999999987444677666666666655556777778999999999999865
No 11
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=8.5e-42 Score=325.73 Aligned_cols=298 Identities=35% Similarity=0.654 Sum_probs=236.1
Q ss_pred ccccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHH
Q 047180 26 WWRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLK 104 (337)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~ 104 (337)
+|++++..+++.++.+...++.+..++.|||+.|.+.+.++.+++++.+.+++.+. .....++|++..|.++||+++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (394)
T 2ay1_A 1 MLGNLKPQAPDKILALMGEFRADPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE 80 (394)
T ss_dssp CGGGCCCCCCCSHHHHHHHHHHCCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred CCccCccCCCccHHHHHHHHHhCCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHH
Confidence 37889999999999998888776667899999998765555456778898887764 32246689888999999999999
Q ss_pred HHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChH
Q 047180 105 LAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFA 184 (337)
Q Consensus 105 ~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~ 184 (337)
|+.+.+ +++++|.+++|+||++|+.+++.++..+.|||+|++++|+|+.|...++..|++++.+|+..++++++|++
T Consensus 81 ~~~~~~---~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 157 (394)
T 2ay1_A 81 LILGDG---LKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFE 157 (394)
T ss_dssp HHHGGG---CCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHH
T ss_pred HHhCCC---CCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHH
Confidence 985542 23455432249999999999987766545899999999999999999999999999999853346889999
Q ss_pred HHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEE
Q 047180 185 ALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLG 264 (337)
Q Consensus 185 ~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 264 (337)
.+++.+.+.+.+++++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++ ...+..++..+...+++++
T Consensus 158 ~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~~~i 236 (394)
T 2ay1_A 158 GMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDG-LEEDAAGTRLIASRIPEVL 236 (394)
T ss_dssp HHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSC-HHHHHHHHHHHHHHCSSEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccC-cccchHHHHHHhhcCCCEE
Confidence 999998754333566667999999999999999999999999999999999999998753 1001223443444456899
Q ss_pred EEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 265 LAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 265 ~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
+++||||.||++|+|+||+++.+++++.++.+...+....+..+++++.++|.++..+|++.+
T Consensus 237 ~~~s~sK~~~~~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 299 (394)
T 2ay1_A 237 IAASCSKNFGIYRERTGCLLALCADAATRELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPE 299 (394)
T ss_dssp EEEECTTTTTCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHH
T ss_pred EEEeccCCCcCcCCccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChH
Confidence 999999999999999999986434677666666666544556677778999999999998763
No 12
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=6.7e-42 Score=329.32 Aligned_cols=298 Identities=20% Similarity=0.298 Sum_probs=229.7
Q ss_pred CCCCCCCchhhHHHHHhcCC----CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHH
Q 047180 30 VEPAAKDPILGVTEAFLADP----SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKL 105 (337)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 105 (337)
....+++.++.+.+.+++.. ..++|+|++|.|.+.++++.+++.+.++++++......+|++..|.++||+++++|
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~ 92 (418)
T 3rq1_A 13 KGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSEHVGYAPIAGIPDFLCAAEKE 92 (418)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHHHHSCCCTTCCHHHHHHHHHH
T ss_pred CCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccccCCCCCCCChHHHHHHHHHH
Confidence 33456677888876665433 34789999999887777788888999888765322346899999999999999999
Q ss_pred HhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 106 AYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 106 ~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
+.+.+++.. ...+++|+|+++++.+++..+.+ |||+|++++|+|+.|...++..|++++.+|+.++ ++++|++.
T Consensus 93 ~~~~~~~~~---~~~i~~t~g~~~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~ 166 (418)
T 3rq1_A 93 CFGNFRPEG---HIRSIATAGGTGGIHHLIHNYTE--PGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDE-HNNFNHEA 166 (418)
T ss_dssp HHGGGCCSS---EEEEEEESHHHHHHHHHHHHHSC--TTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCT-TSSBCHHH
T ss_pred HhcccCccc---cccEEECCchHHHHHHHHHHhcC--CCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCC-CCCcCHHH
Confidence 976543321 12468999999999999988766 9999999999999999999999999999998443 47899999
Q ss_pred HHHHHHcC--CCCeEEEEeCCC-CCCCCCCCCHHHHHHHHHHHH------hcCceeEEcccCCCCCCCCCccchHHH-HH
Q 047180 186 LMDDIKNA--PNGSFFLLHACA-HNPTGVDPSEEQWKEISYQIK------AKGHFPFFDMAYQGFASGDPERDAKAI-RI 255 (337)
Q Consensus 186 l~~~l~~~--~~~~~ili~~~p-~NPTG~~~s~~~~~~l~~~~~------~~~~~ii~De~Y~~~~~~~~~~~~~~~-~~ 255 (337)
+++.+.+. ++.+.++++++| |||||.+++.+++++|+++|+ +++++||+||+|.+|.+.. ....++ ..
T Consensus 167 l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~--~~~~~~~~~ 244 (418)
T 3rq1_A 167 FQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEK--DEVRAFFNK 244 (418)
T ss_dssp HHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCH--HHHHGGGGG
T ss_pred HHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCCh--HHHHHHHHH
Confidence 99988742 123445555889 999999999999999999999 8999999999999987421 111111 11
Q ss_pred hhhcCCe--EEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 256 FLKDGHL--LGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 256 ~~~~~~~--~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
+....++ +++++||||+||++|+|+||++++++++++++.+........+..|++++.++|.++..+|++.++.+.|.
T Consensus 245 ~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 324 (418)
T 3rq1_A 245 FSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYE 324 (418)
T ss_dssp GTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHH
Confidence 1112234 58899999999999999999987656788887776644443344567789999999999999986656565
Q ss_pred hh
Q 047180 334 KE 335 (337)
Q Consensus 334 ~e 335 (337)
++
T Consensus 325 ~~ 326 (418)
T 3rq1_A 325 AE 326 (418)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 13
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=6.1e-42 Score=329.14 Aligned_cols=296 Identities=19% Similarity=0.228 Sum_probs=228.9
Q ss_pred ccccccCCCCCCCchhhHHHHHhcCC----CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHH
Q 047180 24 SSWWRNVEPAAKDPILGVTEAFLADP----SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMV 99 (337)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr 99 (337)
+++........+++++.+.+.+++.. +.++|+|+.|.+.+.++++.+++.+.+|++++.....++|.+..|.++||
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr 85 (413)
T 3t18_A 6 MTIKRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRSHIASYAPIEGEKDYR 85 (413)
T ss_dssp SSCTTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHHHHHSCCCTTCCHHHH
T ss_pred hhhhhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcccccCcCCCCCCHHHH
Confidence 44444566677788888877665432 34789999999877777777888899888775322346899989999999
Q ss_pred HHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCC
Q 047180 100 EETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTK 179 (337)
Q Consensus 100 ~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~ 179 (337)
+++++|+.+.+.+. +++ .+++|+|+++++.+++..+.+ |||+|++++|+|+.|...++..|++++.+|+.++ ++
T Consensus 86 ~~la~~~~~~~~~~-~~~--~i~~t~g~~~al~~~~~~~~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~ 159 (413)
T 3t18_A 86 KIVIDTLFGPYKPE-GYI--SAIATPGGTGAIRSAIFSYLD--EGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTD-DF 159 (413)
T ss_dssp HHHHHHHHGGGCCS-SEE--EEEEESHHHHHHHHHHHHHCC--SSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCT-TS
T ss_pred HHHHHHHhcccCcc-ccC--cEEEcCccHHHHHHHHHHhcC--CCCEEEECCCCcccHHHHHHHhCCeEEEeeccCC-CC
Confidence 99999987654332 222 468999999999999988766 9999999999999999999999999999998443 47
Q ss_pred CCChHHHHHHHHcC--CCCeEEEEeCCC-CCCCCCCCCHHHHHHHHHHHH------hcCceeEEcccCCCCCCCCCccch
Q 047180 180 GLDFAALMDDIKNA--PNGSFFLLHACA-HNPTGVDPSEEQWKEISYQIK------AKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 180 ~~d~~~l~~~l~~~--~~~~~ili~~~p-~NPTG~~~s~~~~~~l~~~~~------~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++|++.+++.+.+. ++.+.++++++| |||||.+++.+++++|+++|+ ++|++||+||+|.+|.+.. ...
T Consensus 160 ~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~--~~~ 237 (413)
T 3t18_A 160 AFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDG--DQQ 237 (413)
T ss_dssp SBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSS--STT
T ss_pred CcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCCh--hhH
Confidence 99999999988641 123445555889 999999999999999999999 8999999999999997542 111
Q ss_pred HHH-HHhhhcCCe--EEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 251 KAI-RIFLKDGHL--LGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 251 ~~~-~~~~~~~~~--~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
.++ ..+....++ +++++||||.||++|+|+||++++.+++++++.+...........|++++.++|.++..+|++.+
T Consensus 238 ~~~~~~~~~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 317 (413)
T 3t18_A 238 RKFFEKFSNLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAEN 317 (413)
T ss_dssp TGGGGGGTTCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHH
T ss_pred HHHHHHHhhcCCCeeEEEEEecCccCCCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChH
Confidence 111 112222334 58889999999999999999987555788877776543333334566789999999999999765
No 14
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=5.9e-40 Score=312.84 Aligned_cols=272 Identities=17% Similarity=0.139 Sum_probs=205.2
Q ss_pred cCCCCCCCchhhHHHHHhcC--CCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHH
Q 047180 29 NVEPAAKDPILGVTEAFLAD--PSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKL 105 (337)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~ 105 (337)
++...+.+++..+...+++. ..++.|+|+.|.+. ..+++.+.+++.+. .. ...+|++..|.++||+++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~lr~~ia~~ 80 (385)
T 1b5p_A 7 RVQAMKPSATVAVNAKALELRRQGVDLVALTAGEPD-----FDTPEHVKEAARRALAQ-GKTKYAPPAGIPELREALAEK 80 (385)
T ss_dssp HHHHCCCCHHHHHHHHHHHHHHTTCCCEECCCSSCS-----SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHH
T ss_pred HHhhcCcchHHHHHHHHHHHHhcCCCEEEecCCCCC-----CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHH
Confidence 34444555565555444321 23578999999652 33456777776553 33 245798888999999999999
Q ss_pred HhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 106 AYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 106 ~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
+...++..+++++ +++|+|+++++.+++..+.+ |||+|++++|+|+.|...++..|++++.+|+..++++.+|++.
T Consensus 81 ~~~~~g~~~~~~~--i~~t~g~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 156 (385)
T 1b5p_A 81 FRRENGLSVTPEE--TIVTVGGSQALFNLFQAILD--PGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPER 156 (385)
T ss_dssp HHHTTCCCCCGGG--EEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred HHHHhCCCCChHH--EEEcCChHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence 9654443345555 57899999999999987765 9999999999999999999999999999998533467899999
Q ss_pred HHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE
Q 047180 186 LMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL 265 (337)
Q Consensus 186 l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (337)
+++.+.. +..++++|+||||||.+++.+++++|+++|+++|++||+||+|.++.++. . ..++..+.. +++++
T Consensus 157 l~~~l~~---~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~--~~~~~~~~~--~~~i~ 228 (385)
T 1b5p_A 157 VRRAITP---RTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-E--HFSPGRVAP--EHTLT 228 (385)
T ss_dssp HHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-C--CCCGGGTCT--TTEEE
T ss_pred HHHhcCC---CCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-C--CCCHHHcCC--CCEEE
Confidence 9887752 34444558999999999999999999999999999999999999987632 1 112222322 57999
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++||||.||++|+|+||+++ ++++++++.. .......+++.++|.++..+|++
T Consensus 229 ~~s~SK~~~~~G~RiG~~~~---~~~~~~~l~~----~~~~~~~~~~~~~~~a~~~~l~~ 281 (385)
T 1b5p_A 229 VNGAAKAFAMTGWRIGYACG---PKEVIKAMAS----VSRQSTTSPDTIAQWATLEALTN 281 (385)
T ss_dssp EEESTTTTTCGGGCCEEEEC---CHHHHHHHHH----HHHTTTCSCCHHHHHHHHHHHHC
T ss_pred EEechhhcCCcccceEEEEe---CHHHHHHHHH----HHhhccCCCCHHHHHHHHHHHhC
Confidence 99999999999999999986 4555555443 33333456889999999999975
No 15
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=1.4e-39 Score=314.86 Aligned_cols=286 Identities=15% Similarity=0.140 Sum_probs=207.4
Q ss_pred ccccCCCCCCCchhhHHHHHhcCCCC--CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHH
Q 047180 26 WWRNVEPAAKDPILGVTEAFLADPSP--DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEET 102 (337)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~ai 102 (337)
+|+.+...+.+++..+.+.++.+..+ +.|+|+.|.+. ..+..++++.+.+|+.+. ......+|.+..|.++||+++
T Consensus 27 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~i~l~~g~~~-~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~l 105 (427)
T 3dyd_A 27 RPSDMAKKTFNPIRAIVDNMKVKPNPNKTMISLSIGDPT-VFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEI 105 (427)
T ss_dssp CCCC----------------CCCCCTTSCCEECCCSCTT-TTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCCHHHHHHH
T ss_pred chhhHhhcccchHHHHHHHHhhcccCCCCEEeCCCcCCC-ccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCcHHHHHHH
Confidence 47788888888999998888777654 45999999853 233466788898887764 333356899999999999999
Q ss_pred HHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCC
Q 047180 103 LKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLD 182 (337)
Q Consensus 103 a~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d 182 (337)
++++.+. +...++++ +++|+||++|+.+++.++.+ |||+|++++|+|++|...++..|++++.+|+.+++++++|
T Consensus 106 a~~~~~~-~~~~~~~~--v~~t~g~t~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 180 (427)
T 3dyd_A 106 ASYYHCP-EAPLEAKD--VILTSGCSQAIDLCLAVLAN--PGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSWEID 180 (427)
T ss_dssp HHHHCBT-TBCCCGGG--EEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEEC
T ss_pred HHHHhhc-CCCCChHH--EEEecCcHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCC
Confidence 9998655 33344555 57999999999999988876 8999999999999999999999999999998655568899
Q ss_pred hHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCe
Q 047180 183 FAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHL 262 (337)
Q Consensus 183 ~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~ 262 (337)
++.+++.+.+ +..++++++||||||.+++.++|++|+++|+++++++|+||+|.+|.++. ....++..+ ....+
T Consensus 181 ~~~l~~~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g--~~~~~~~~~-~~~~~ 254 (427)
T 3dyd_A 181 LKQLEYLIDE---KTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSD--CKYEPLATL-STDVP 254 (427)
T ss_dssp HHHHHSSCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSS--CCCCCGGGG-CSSCC
T ss_pred HHHHHHHhcc---CCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCC--CcCccHHHh-CCCCc
Confidence 9999987753 34444558899999999999999999999999999999999999997642 111122222 22346
Q ss_pred EEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 263 LGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 263 ~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+++++||||.|+++|+|+||+++...+....+.+.+.+....+. ..+++.++|.++..+|+
T Consensus 255 vi~~~S~sK~~~~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~ 315 (427)
T 3dyd_A 255 ILSCGGLAKRWLVPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILC 315 (427)
T ss_dssp EEEEEESTTTSSCGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHH
T ss_pred EEEEeeccccCCCcCcceEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHH
Confidence 89999999999999999999987532211112344444443333 34688999999999998
No 16
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-38 Score=307.35 Aligned_cols=283 Identities=13% Similarity=0.081 Sum_probs=210.8
Q ss_pred cccccccccCCCCCCCchhhHHHHHhc------CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCC
Q 047180 21 RWMSSWWRNVEPAAKDPILGVTEAFLA------DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMG 93 (337)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~ 93 (337)
..|++.|.... .+.+.+..+.+..++ ...++.|||+.|.+. ..+++.+.+++.+. ......+|++..
T Consensus 22 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-----~~~~~~v~~a~~~~~~~~~~~~Y~~~~ 95 (447)
T 3b46_A 22 KVVANKYFTSN-TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFS-----YSPPQFAIKEAQKALDIPMVNQYSPTR 95 (447)
T ss_dssp CCCCCHHHHSC-CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCS-----SCCCHHHHHHHHHHTTSGGGGSCCCTT
T ss_pred hhhhccccccc-cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCC-----CCCCHHHHHHHHHHHhCcCCCCCCCCC
Confidence 33667787766 445555555544421 134578999999752 33567788877654 322346899989
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~ 173 (337)
|.++||+++++|+....+...++++ +++|+|+++++.+++..+.+ |||+|++++|+|+.|...++..|++++.+|+
T Consensus 96 g~~~lr~~ia~~l~~~~g~~~~~~~--v~~t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~ 171 (447)
T 3b46_A 96 GRPSLINSLIKLYSPIYNTELKAEN--VTVTTGANEGILSCLMGLLN--AGDEVIVFEPFFDQYIPNIELCGGKVVYVPI 171 (447)
T ss_dssp CCHHHHHHHHHHHTTTTTSCCCGGG--EEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCChhh--EEEeCCHHHHHHHHHHHHcC--CCCEEEEeCCCchhHHHHHHHcCCEEEEEeC
Confidence 9999999999999654443344554 57999999999999988765 8999999999999999999999999999998
Q ss_pred ccCC----------CCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCC
Q 047180 174 YHPG----------TKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFAS 243 (337)
Q Consensus 174 ~~~~----------~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~ 243 (337)
..++ ++++|++.+++.+. + +..++++++||||||.+++.+++++|+++|++||++||+||+|.++.+
T Consensus 172 ~~~~~~~~~~~~~~~~~~d~~~l~~~l~--~-~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~ 248 (447)
T 3b46_A 172 NPPKELDQRNTRGEEWTIDFEQFEKAIT--S-KTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYF 248 (447)
T ss_dssp ECCGGGGTSCBCSTTSEECHHHHHTTCC--T-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBC
T ss_pred CCccccccccccccCcccCHHHHHHhhc--c-CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhccc
Confidence 4331 46799999998775 2 334444479999999999999999999999999999999999999876
Q ss_pred CCCccchHHHHHh-hhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHH
Q 047180 244 GDPERDAKAIRIF-LKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTI 322 (337)
Q Consensus 244 ~~~~~~~~~~~~~-~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~ 322 (337)
+. ...++..+ ....++++++.||||.||++|||+||+++ .++++++.+.. .......+++.+.|.++..+
T Consensus 249 ~g---~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~--~~~~l~~~l~~----~~~~~~~~~~~~~~~a~~~a 319 (447)
T 3b46_A 249 TD---SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLS--LNAELLSYAAK----AHTRICFASPSPLQEACANS 319 (447)
T ss_dssp SS---CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEEC--SCHHHHHHHHH----HHHHHTSSCCHHHHHHHHHH
T ss_pred CC---CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEe--CCHHHHHHHHH----HHhhccCCCChHHHHHHHHH
Confidence 42 11112222 12235799999999999999999999985 25666665543 22222235688899999989
Q ss_pred hCC
Q 047180 323 LGD 325 (337)
Q Consensus 323 l~~ 325 (337)
|++
T Consensus 320 L~~ 322 (447)
T 3b46_A 320 IND 322 (447)
T ss_dssp HHH
T ss_pred HhC
Confidence 875
No 17
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=2.3e-37 Score=305.59 Aligned_cols=244 Identities=15% Similarity=0.135 Sum_probs=189.3
Q ss_pred hHHHHHHHHhcC--c-CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh-hhCCCCeE
Q 047180 72 ECVREAERRIAG--T-ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK-RFHPDSQI 147 (337)
Q Consensus 72 ~~v~~a~~~~~~--~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~-~~~pgd~V 147 (337)
+.+.++.+.+.. . ...+|.++.|.++||+++++|+.++++...++++ +++|+|+++++.+++.++. . +||+|
T Consensus 110 ~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~--i~~t~G~~~al~~~~~~l~~~--~gd~V 185 (500)
T 3tcm_A 110 DSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADD--IFLTDGASPGVHLMMQLLIRN--EKDGI 185 (500)
T ss_dssp HHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGG--EEEESSSHHHHHHHHHHHCCS--TTEEE
T ss_pred HHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCccc--EEEcCCHHHHHHHHHHHHcCC--CCCEE
Confidence 345555555532 2 4678999999999999999998644333345555 5899999999999998875 5 89999
Q ss_pred EEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 047180 148 YIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLHACAHNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 148 lv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~ 224 (337)
++++|+|+.|...++..|++++.|++.++++|++|++.|++++++. ..+..++++++||||||.++|.++|++|+++
T Consensus 186 lv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~l 265 (500)
T 3tcm_A 186 LVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKF 265 (500)
T ss_dssp EEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred EEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHH
Confidence 9999999999999999999999999866556899999999998742 1123344446899999999999999999999
Q ss_pred HHhcCceeEEcccCCCCCCCCCccchHHHHHhh-h-----cCCeEEEEecccccc-cccccccceeEeeeCCHHHHHHHH
Q 047180 225 IKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL-K-----DGHLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 225 ~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-~-----~~~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
|++++++||+||+|.++.+++. ....++..+. . ...++++++||||+| |++|+|+||+++...++++++.+.
T Consensus 266 a~~~~~~li~Deay~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~ 344 (500)
T 3tcm_A 266 CKNEGLVLLADEVYQENIYVDN-KKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIY 344 (500)
T ss_dssp HHHHTCEEEEECTTTTCBCCTT-CCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHH
T ss_pred HHHcCCEEEEecCccccccCCC-CCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHH
Confidence 9999999999999999886421 1111222221 1 123689999999999 999999999987544677766665
Q ss_pred HHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 298 SQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 298 ~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
. .. ....+++.++|.++..++++
T Consensus 345 ~----~~-~~~~~~~~~~q~~~~~~l~~ 367 (500)
T 3tcm_A 345 K----IA-SVNLCSNITGQILASLVMNP 367 (500)
T ss_dssp H----HH-HTTCCCCHHHHHHHHHHHSC
T ss_pred H----HH-hcccCCCHHHHHHHHHHhcC
Confidence 4 22 23557899999999999985
No 18
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=2.6e-37 Score=294.57 Aligned_cols=265 Identities=12% Similarity=0.061 Sum_probs=201.2
Q ss_pred CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcc-cccC-ceeEEeec
Q 047180 48 DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEF-IKDK-RIAAVQSL 125 (337)
Q Consensus 48 ~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~-~~~~-~i~~~~t~ 125 (337)
+.+.+.|||+.|.+. ..+++.+.+++.+... ...+|++..|..++|+++++|+.++++.. .+++ + +++|+
T Consensus 27 ~~g~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~-~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~--i~~t~ 98 (396)
T 3jtx_A 27 PEGMEAVPLHIGEPK-----HPTPKVITDALTASLH-ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNE--ILPVL 98 (396)
T ss_dssp CTTCCCEECSCCSCC-----SCCCHHHHHHHHHTGG-GGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTS--EEEES
T ss_pred ccCCCeEEeCCcCCC-----CCCCHHHHHHHHHHhh-hccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCe--EEEcC
Confidence 345679999999642 3356788888766422 35689988999999999999986544332 3345 5 57899
Q ss_pred cchhHHHHHHHHHhhhCCC-----CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEE
Q 047180 126 SGTGACRLFADFQKRFHPD-----SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFL 200 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~pg-----d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~il 200 (337)
|+++++.+++..+.. +| |+|+++.|+|+.|...++..|++++.+|+ +++++.+|++.+++++.. +.++++
T Consensus 99 g~~~al~~~~~~~~~--~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~d~~~l~~~~~~--~~~~v~ 173 (396)
T 3jtx_A 99 GSREALFSFVQTVLN--PVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNPDWRSISEEVWK--RTKLVF 173 (396)
T ss_dssp SHHHHHHHHHHHHCC--C---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCCCGGGSCHHHHH--TEEEEE
T ss_pred CcHHHHHHHHHHHhC--CCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCccCHHHHHHhhcc--CcEEEE
Confidence 999999999988766 76 79999999999999999999999999998 555677899999998874 334444
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHh---hhcCCeEEEEecccccccccc
Q 047180 201 LHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIF---LKDGHLLGLAQSYAKNMGLYG 277 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~---~~~~~~~i~~~S~SK~~~~~G 277 (337)
+++||||||.+++.+++++|+++|++++++||+||+|.++.++. .........+ ....++++++.||||.|+++|
T Consensus 174 -l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 251 (396)
T 3jtx_A 174 -VCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDG-NKPLGCLQAAAQLGRSRQKLLMFTSLSKRSNVPG 251 (396)
T ss_dssp -EESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTT-CCCCCHHHHHHHTTCCCTTEEEEEESTTTSSCGG
T ss_pred -EECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCchHHhhhhhcccccCcEEEEeccccccCCcc
Confidence 47899999999999999999999999999999999999987642 1111111111 112468999999999999999
Q ss_pred cccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 278 QRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 278 ~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
+|+||++. ++++++.+.. .......+++.++|.++..+|++.+..++.++
T Consensus 252 ~r~G~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 301 (396)
T 3jtx_A 252 LRSGFVAG---DAELLKNFLL----YRTYHGSAMSIPVQRASIAAWDDEQHVIDNRR 301 (396)
T ss_dssp GCCEEEEE---CHHHHHHHHH----HHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHH
T ss_pred cceEEEEe---CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999875 5666665543 22222346788999999999987554444443
No 19
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=5.8e-37 Score=302.56 Aligned_cols=292 Identities=14% Similarity=0.148 Sum_probs=202.4
Q ss_pred cccccccCCCCCCCchhhHHHHHhcC--CC-----CCeeEeeeeeeecCCCC---------------------cccchHH
Q 047180 23 MSSWWRNVEPAAKDPILGVTEAFLAD--PS-----PDKVNVGVGAYRDDNGK---------------------PVVLECV 74 (337)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~i~l~~G~~~~~~~~---------------------~~~~~~v 74 (337)
|+....++.+.-..++...++++++. .+ ..+|++.+|.+...... .++...+
T Consensus 28 ~~~~~~~~~y~~rg~~~~~a~~~~~~~~~g~~~~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~ 107 (498)
T 3ihj_A 28 MNPQVKAVEYAVRGPIVLKAGEIELELQRGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAK 107 (498)
T ss_dssp ETTEEEEEEEEECCHHHHHHHHHHHHHHTTCCCSSSSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHH
T ss_pred HHHHHHHhhhhhcCHHHHHHHHHHHHHhccCCCchhhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHH
Confidence 44444455555555566666555442 12 27899999976321111 1122333
Q ss_pred HHHHHHhc-C--cCCCCCCCCCCCHHHHHHHHHHHhCCCC-cccccCceeEEeeccchhHHHHHHHHHhhhCCCC----e
Q 047180 75 REAERRIA-G--TANMEYLPMGGSVKMVEETLKLAYGDNS-EFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDS----Q 146 (337)
Q Consensus 75 ~~a~~~~~-~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~-~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd----~ 146 (337)
.++.+.+. . ....+|+++.|.+++|+++++|+..+++ ...++++ +++|+|+++++.++++++.. +|| +
T Consensus 108 ~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~--i~~t~G~~~ai~~~~~~l~~--~gd~~~d~ 183 (498)
T 3ihj_A 108 KRARRILQACGGNSLGSYSASQGVNCIREDVAAYITRRDGGVPADPDN--IYLTTGASDGISTILKILVS--GGGKSRTG 183 (498)
T ss_dssp HHHHHHHHHC----------CCSCHHHHHHHHHHHHHHTTTCCCCGGG--EEEESSHHHHHHHHHHHHCC--CCGGGSEE
T ss_pred HHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCccc--EEEcCCHHHHHHHHHHHHcC--CCCCCCCE
Confidence 44433342 1 1356899999999999999999965432 3345565 57899999999999988876 765 9
Q ss_pred EEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 047180 147 IYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACAHNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 147 Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p~NPTG~~~s~~~~~~l~~ 223 (337)
|+++.|+|+.|...++..|++++.|++.++++|++|+++|++.+++.+ +.+++++ +|||||||.+++.+++++|++
T Consensus 184 Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l-~np~NPTG~v~s~~~l~~i~~ 262 (498)
T 3ihj_A 184 VMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCI-INPGNPTGQVQSRKCIEDVIH 262 (498)
T ss_dssp EEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEE-ESSCTTTCCCCCHHHHHHHHH
T ss_pred EEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEE-ECCCCCCCCcCCHHHHHHHHH
Confidence 999999999999999999999999998655578999999999987532 1234444 699999999999999999999
Q ss_pred HHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh-------cCCeEEEEecccccc-cccccccceeEeeeCCHHHHHH
Q 047180 224 QIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK-------DGHLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 224 ~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-------~~~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~ 295 (337)
+|++++++||+||+|.++.+++. ....++..+.. ...++++++||||.| |++|+|+||+++...++++++.
T Consensus 263 la~~~~~~li~De~y~~~~~~~~-~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~ 341 (498)
T 3ihj_A 263 FAWEEKLFLLADEVYQDNVYSPD-CRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQ 341 (498)
T ss_dssp HHHHHTCEEEEECTTTTCBCCTT-CCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHH
T ss_pred HHHHcCcEEEEEcCccccccCCC-CCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHH
Confidence 99999999999999999987521 11122332221 123689999999999 8999999999865557777666
Q ss_pred HHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 296 VKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 296 ~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+... .. .+.+++.++|.++..++++
T Consensus 342 l~~~----~~-~~~~~~~~~q~a~~~~l~~ 366 (498)
T 3ihj_A 342 LVKL----LS-VRLCPPVSGQAAMDIVVNP 366 (498)
T ss_dssp HHHH----HH-HSCCCCHHHHHHHHHHTCC
T ss_pred HHHH----Hh-ccCCCCHHHHHHHHHHhcC
Confidence 5542 22 4567899999999999985
No 20
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=3.2e-36 Score=287.03 Aligned_cols=276 Identities=16% Similarity=0.096 Sum_probs=197.4
Q ss_pred cCCCCCCCchhhHH---HHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHH
Q 047180 29 NVEPAAKDPILGVT---EAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKL 105 (337)
Q Consensus 29 ~~~~~~~~~~~~~~---~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~ 105 (337)
++...+++.+..+. .++..+ +.+.|||+.|.+. ..+++.+.+++.+.......+|++..|..++|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~-g~~~i~l~~g~~~-----~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~ia~~ 80 (391)
T 3h14_A 7 SRSAVDPFIVMDVMEAARRAEEA-GRRIIHMEVGQPG-----TGAPRGAVEALAKSLETDALGYTVALGLPALRQRIARL 80 (391)
T ss_dssp STTCCCCCTTHHHHHHHHHHHHT-TCCCEECCCSSCS-----SCSCHHHHHHHHHHHC----------CCHHHHHHHHHH
T ss_pred hHhhcCcchHHHHHHHHHHHHhc-CCCeEEccCCCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCChHHHHHHHHHH
Confidence 44444445554444 334333 3578999999642 34567788877664222346899889999999999999
Q ss_pred HhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 106 AYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 106 ~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
+.+.++...++++ +++|+|+++++.+++..+.. |||+|+++.|+|+.|...++..|++++.+|+..+.++.+|++.
T Consensus 81 ~~~~~g~~~~~~~--v~~t~g~~~al~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 156 (391)
T 3h14_A 81 YGEWYGVDLDPGR--VVITPGSSGGFLLAFTALFD--SGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPAD 156 (391)
T ss_dssp HHHHHCCCCCGGG--EEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHH
T ss_pred HHHHhCCCCCHHH--EEEecChHHHHHHHHHHhcC--CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence 8543332244555 57899999999999988766 8999999999999999999999999999998544457789988
Q ss_pred HHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEE
Q 047180 186 LMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGL 265 (337)
Q Consensus 186 l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (337)
+++. +.+++++ ++||||||.+++.+++++|+++|+++|+++|+||+|.++.++.. ..+ +....+++++
T Consensus 157 l~~~-----~~~~v~i-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~---~~~---~~~~~~~~i~ 224 (391)
T 3h14_A 157 FAGL-----DLAGLMV-ASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK---AVT---ALELTDECYV 224 (391)
T ss_dssp HTTS-----CCSEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC---CCC---GGGTCSSSEE
T ss_pred HHhc-----CCeEEEE-CCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC---CcC---hhhcCCCEEE
Confidence 7654 2345554 78999999999999999999999999999999999999876421 111 1122468999
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
++||||.||++|+|+||+++ ++++++.+.. .......+++.++|.++..+|+..+..++.+
T Consensus 225 ~~s~sK~~g~~G~r~G~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 285 (391)
T 3h14_A 225 INSFSKYFSMTGWRVGWMVV---PEDQVRVVER----IAQNMFICAPHASQVAALAALDCDAELQANL 285 (391)
T ss_dssp EEESSSTTCCTTSCCEEEEC---CGGGHHHHHH----HHHHTTCCCCHHHHHHHHHHTTCHHHHHHHH
T ss_pred EEechhccCCccceeEEEEe---CHHHHHHHHH----HHhhhccCCCHHHHHHHHHHhCChHHHHHHH
Confidence 99999999999999999986 3445454433 2333344678899999988888654444433
No 21
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.9e-36 Score=291.18 Aligned_cols=275 Identities=14% Similarity=0.048 Sum_probs=207.1
Q ss_pred cccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcC-CCCCCCCCCCHHHHHHHHH
Q 047180 27 WRNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTA-NMEYLPMGGSVKMVEETLK 104 (337)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~-~~~Y~~~~G~~~lr~aia~ 104 (337)
++++...+.+.+..+...... ++.|+|+.|.+ ...+++.+.+++.+. .... ..+|++..|.+++|+++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~---~~~i~l~~g~~-----~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la~ 78 (422)
T 3fvs_A 7 ARRLDGIDYNPWVEFVKLASE---HDVVNLGQGFP-----DFPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILAS 78 (422)
T ss_dssp CGGGTTCCCCHHHHHHHHHHT---SCCEECCCSSC-----SSCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHHHH
T ss_pred HHHhhccCccHHHHHHHHhhc---CCceEeCCCCC-----CCCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHHHH
Confidence 456666666777666654432 47899999964 244677888887664 3222 4689988899999999999
Q ss_pred HHhCCCCccccc-CceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc--------
Q 047180 105 LAYGDNSEFIKD-KRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH-------- 175 (337)
Q Consensus 105 ~~~~~~~~~~~~-~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~-------- 175 (337)
|+...++..+++ ++ +++|+|+++++.+++..+.. +||+|+++.|+|+.|...++..|++++.+|+..
T Consensus 79 ~~~~~~g~~~~~~~~--i~~~~g~~~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~ 154 (422)
T 3fvs_A 79 FFGELLGQEIDPLRN--VLVTVGGYGALFTAFQALVD--EGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGEL 154 (422)
T ss_dssp HHHHHHTCCCCHHHH--EEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSC
T ss_pred HHHHhhCCCCCCCCc--EEEECChHHHHHHHHHHHcC--CCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccccccc
Confidence 985433333444 34 57899999999999988765 899999999999999999999999999999853
Q ss_pred --CCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 176 --PGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 176 --~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
..++.+|++.+++.+.. +..++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.++.. ...++
T Consensus 155 ~~~~~~~~d~~~l~~~~~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~ 229 (422)
T 3fvs_A 155 GSSSNWQLDPMELAGKFTS---RTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGH--QHISI 229 (422)
T ss_dssp CBGGGSBCCHHHHHTTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCG
T ss_pred ccccCCCCCHHHHHhhcCC---CceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC--CCCCh
Confidence 12466899999887752 344445589999999999999999999999999999999999999876421 11122
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
..+....++++++.||||.||++|+|+||+++ ++++++.+.. .......+++.++|.++..+|++
T Consensus 230 ~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~ 294 (422)
T 3fvs_A 230 ASLPGMWERTLTIGSAGKTFSATGWKVGWVLG---PDHIMKHLRT----VHQNSVFHCPTQSQAAVAESFER 294 (422)
T ss_dssp GGSTTTGGGEEEEEEHHHHHTCGGGCCEEEEC---CHHHHHHHHH----HHHTTTCCCCHHHHHHHHHHHHH
T ss_pred hhcccccCcEEEEecchhccCCccceEEEEEe---CHHHHHHHHH----HHhhccCCCCcHHHHHHHHHHhh
Confidence 22322235789999999999999999999985 4555554433 22333345788999999988863
No 22
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=5.4e-36 Score=285.08 Aligned_cols=274 Identities=15% Similarity=0.108 Sum_probs=204.3
Q ss_pred CCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhC
Q 047180 30 VEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYG 108 (337)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~ 108 (337)
+...+.+.+..+...+++. ++.|||+.|.+. +.+++.+.+++.+. .. ...+|++..|..++|+++++|+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~--~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la~~~~~ 78 (389)
T 1gd9_A 7 LELVSASEIRKLFDIAAGM--KDVISLGIGEPD-----FDTPQHIKEYAKEALDK-GLTHYGPNIGLLELREAIAEKLKK 78 (389)
T ss_dssp HHHSCCCHHHHHHHHHHTC--SSCEECCCCSCS-----SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHHHH
T ss_pred hHhCChhHHHHHHHHHhhh--cCeEecCCCCCC-----CCCCHHHHHHHHHHHhC-CCCCCCCCCCcHHHHHHHHHHHHH
Confidence 3444556677777666554 468999998642 33567777776653 33 245798888999999999999853
Q ss_pred CCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHH
Q 047180 109 DNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMD 188 (337)
Q Consensus 109 ~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~ 188 (337)
..+...++++ ++++|+|+++++.+++..+.. +||+|++++|+|+.|...++..|++++.+|+..++++.+|++.+++
T Consensus 79 ~~g~~~~~~~-~v~~~~g~~~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 155 (389)
T 1gd9_A 79 QNGIEADPKT-EIMVLLGANQAFLMGLSAFLK--DGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDELKK 155 (389)
T ss_dssp HHCCCCCTTT-SEEEESSTTHHHHHHHTTTCC--TTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHHHH
T ss_pred HhCCCCCCCC-eEEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHHHH
Confidence 3222133444 147899999999999877655 8999999999999999999999999999998433357789999999
Q ss_pred HHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEec
Q 047180 189 DIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 189 ~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
.+.+ +..++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++. . ...++..+....++++++.|
T Consensus 156 ~l~~---~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~-~-~~~~~~~~~~~~~~~i~~~s 230 (389)
T 1gd9_A 156 YVTD---KTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDD-A-RHYSIASLDGMFERTITVNG 230 (389)
T ss_dssp HCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTT-C-CCCCGGGSTTCGGGEEEEEE
T ss_pred hcCc---CceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCC-C-CCCCHhhccCCCCCEEEEec
Confidence 8853 33444458999999999999999999999999999999999999987531 1 01122222221347899999
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
|||.||++|+|+||+++ ++++++++.. .......+++.++|.++..+|++.
T Consensus 231 ~sK~~~~~G~r~G~~~~---~~~~~~~l~~----~~~~~~~~~~~~~~~a~~~~l~~~ 281 (389)
T 1gd9_A 231 FSKTFAMTGWRLGFVAA---PSWIIERMVK----FQMYNATCPVTFIQYAAAKALKDE 281 (389)
T ss_dssp STTTTTCGGGCCEEEEC---CHHHHHHHHH----HHTTTTCSCCHHHHHHHHHHHTCH
T ss_pred ChhhcCCcccceEEEEE---CHHHHHHHHH----HHhhhccCCCHHHHHHHHHHHhCC
Confidence 99999999999999986 4555555543 223333467889999999999873
No 23
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=2.1e-36 Score=288.75 Aligned_cols=257 Identities=14% Similarity=0.142 Sum_probs=193.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcC---CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTA---NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~---~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
++.|||+.|.+ ...+++.+.+++.+. .... ..+|++..|..+||+++++|+...++...++++ +++|+|
T Consensus 35 ~~~i~l~~~~~-----~~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~--i~~~~g 107 (398)
T 3ele_A 35 ENVYDFSIGNP-----SIPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVETRAAIAEFLNNTHGTHFNADN--LYMTMG 107 (398)
T ss_dssp GGCEECCSCCC-----CSCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG--EEEESS
T ss_pred CCeEEeecCCC-----CCCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHH--EEEccC
Confidence 56899999853 234567788877654 2211 468998899999999999998543332244555 578999
Q ss_pred chhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCC
Q 047180 127 GTGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACA 205 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p 205 (337)
+++++.+++..+.. || |+|++++|+|+.|...++..|++++.+|+. ++++++|++.+++.+.. +..++++++|
T Consensus 108 ~~~al~~~~~~l~~--~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~---~~~~v~~~~p 181 (398)
T 3ele_A 108 AAASLSICFRALTS--DAYDEFITIAPYFPEYKVFVNAAGARLVEVPAD-TEHFQIDFDALEERINA---HTRGVIINSP 181 (398)
T ss_dssp HHHHHHHHHHHHCC--STTCEEEEESSCCTHHHHHHHHTTCEEEEECCC-TTTSSCCHHHHHHTCCT---TEEEEEECSS
T ss_pred HHHHHHHHHHHHcC--CCCCEEEEeCCCchhhHHHHHHcCCEEEEEecC-CcCCcCCHHHHHHHhCc---CCCEEEEcCC
Confidence 99999999988766 99 999999999999999999999999999984 34689999999988752 3444455899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHh------cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccc
Q 047180 206 HNPTGVDPSEEQWKEISYQIKA------KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQR 279 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~------~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 279 (337)
|||||.+++.+++++|+++|++ +|++||+||+|.+|.++.. .. .......+++++++||||.||++|+|
T Consensus 182 ~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~--~~---~~~~~~~~~~i~~~s~sK~~~~~G~r 256 (398)
T 3ele_A 182 NNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGI--KV---PFVTKYYDNTLVCYSYSKSLSLPGER 256 (398)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTC--CC---CCGGGTCSSEEEEEESTTTSSCTTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCC--Cc---CChHhhcCCeEEEEehhhcCCCccce
Confidence 9999999999999999999999 9999999999999876421 11 11223346899999999999999999
Q ss_pred cceeEeeeCCHHHHHHHHHHHHhhhcc-cccCCChhHHHHHHHHhCCH
Q 047180 280 VGCLSVLCEDEKQAVAVKSQLQQLARP-MYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 280 vG~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~q~~~~~~l~~~ 326 (337)
+||++++..-.+ ...+...+...... .+.+++.++|.++..++++.
T Consensus 257 ~G~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 303 (398)
T 3ele_A 257 IGYVLVPDEVYD-KAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGAT 303 (398)
T ss_dssp CEEEECCTTSTT-HHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCC
T ss_pred eEEEEEcchhhh-HHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCH
Confidence 999987421111 11233333322222 24567889999998888764
No 24
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=4.9e-36 Score=292.09 Aligned_cols=271 Identities=13% Similarity=0.119 Sum_probs=202.6
Q ss_pred CCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCc--CCCCCCCCCCCHHHHHHHHHHHh
Q 047180 31 EPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGT--ANMEYLPMGGSVKMVEETLKLAY 107 (337)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~--~~~~Y~~~~G~~~lr~aia~~~~ 107 (337)
.....+.+..+..... .++.|||+.|.+. ...++++.+.+++.+. ... ...+|++..|.++||+++++|+.
T Consensus 59 ~~~~~s~~~~~~~~~~---~~~~i~l~~g~p~---~~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~~g~~~lr~~ia~~~~ 132 (448)
T 3aow_A 59 LEMRASEVRELLKLVE---TSDIISLAGGLPN---PKTFPKEIIRDILVEIMEKYADKALQYGTTKGFTPLRETLMKWLG 132 (448)
T ss_dssp HHCCCCHHHHHHHHHH---TSSSEECCCCCCC---GGGSCHHHHHHHHHHHHHHSHHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred hcCCCcHHHHHHHhcc---CCCcEeCCCCCCC---chhCCHHHHHHHHHHHHHhhhHHHhCCCCCCCcHHHHHHHHHHHH
Confidence 3344455555554332 3568999999763 2234567777776553 221 23579998999999999999984
Q ss_pred CCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHH
Q 047180 108 GDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALM 187 (337)
Q Consensus 108 ~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~ 187 (337)
...+.. ++++ +++|+|+++++.+++.++.+ |||+|+++.|+|+.|...++..|++++.+|+. + .++|++.|+
T Consensus 133 ~~~g~~-~~~~--v~~t~G~~~al~~~~~~l~~--~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~--~g~d~~~L~ 204 (448)
T 3aow_A 133 KRYGIS-QDND--IMITSGSQQALDLIGRVFLN--PGDIVVVEAPTYLAALQAFNFYEPQYIQIPLD-D--EGMKVEILE 204 (448)
T ss_dssp HHHCCC-TTSE--EEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEE-T--TEECHHHHH
T ss_pred HhcCcC-Chhh--EEEeCcHHHHHHHHHHHHcC--CCCEEEEeCCChHHHHHHHHHcCCEEEEeccC-C--CCCCHHHHH
Confidence 332221 3444 58999999999999988865 89999999999999999999999999999984 3 359999999
Q ss_pred HHHH----cCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeE
Q 047180 188 DDIK----NAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLL 263 (337)
Q Consensus 188 ~~l~----~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
+.++ +.++.++++++|+||||||.+++.+++++|+++|+++|++||+||+|.++.++. ....++..+. ..+++
T Consensus 205 ~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g--~~~~~~~~~~-~~~~v 281 (448)
T 3aow_A 205 EKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSG--NPEKKIKALD-NEGRV 281 (448)
T ss_dssp HHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSS--CCCCCTGGGC-TTSCE
T ss_pred HHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC--CCCcCHHhcC-CCCCE
Confidence 9886 322334555679999999999999999999999999999999999999987631 1111222231 23579
Q ss_pred EEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 264 GLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 264 i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
+++.||||.|+ +|+|+||+++ ++++++++.. .......+++.++|.++..+|++.
T Consensus 282 i~~~S~SK~~~-~GlriG~v~~---~~~l~~~l~~----~~~~~~~~~~~~~q~a~~~~L~~~ 336 (448)
T 3aow_A 282 IYLGTFSKILA-PGFRIGWMVG---DPGIIRKMEI----AKQSTDLCTNVFGQVVAWRYVDGG 336 (448)
T ss_dssp EEEEESTTTTC-GGGCCEEEEE---CHHHHHHHHH----HHHHHHSSCCHHHHHHHHHHHHTT
T ss_pred EEEccchhhcc-ccccEEEEEe---CHHHHHHHHH----HHHHhcCCCCHHHHHHHHHHHHhC
Confidence 99999999999 9999999986 4666665543 222223357889999999999874
No 25
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=9e-36 Score=287.75 Aligned_cols=270 Identities=17% Similarity=0.211 Sum_probs=200.8
Q ss_pred CCeeEeeeeee-ecCCCCcccchHH--HHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCce-eEEeec
Q 047180 51 PDKVNVGVGAY-RDDNGKPVVLECV--REAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRI-AAVQSL 125 (337)
Q Consensus 51 ~~~i~l~~G~~-~~~~~~~~~~~~v--~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i-~~~~t~ 125 (337)
++.|||+.|.+ . +..++.+ .+++.+ +......+|++..|.++||+++++|+.+++ ...+++++ .+++|+
T Consensus 47 ~~~i~l~~g~~~~-----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 47 STTYNATIGMATN-----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN 120 (430)
T ss_dssp TCSEECCCSSCEE-----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred CCcEEeeeeeccC-----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence 56899999976 3 1123333 333322 222135689988899999999999985443 22344441 147899
Q ss_pred cchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh-cCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCC
Q 047180 126 SGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD-AHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHAC 204 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~-~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~ 204 (337)
|+++++.+++..+.. |||+|++++|+|+.|...++. .|++++.+|+..+ ++++|++++++.+...+.+..++++++
T Consensus 121 g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~~~v~i~~ 197 (430)
T 2x5f_A 121 ALTHGLSLVGDLFVN--QDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDK-DGHYTTDSLVEALQSYNKDKVIMILNY 197 (430)
T ss_dssp HHHHHHHHHHHHHCC--TTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCT-TSCBCSHHHHHHHHHCCSSEEEEEECS
T ss_pred CchHHHHHHHHHHhC--CCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCc-cCCcCHHHHHHHHHhcCCCCEEEEEcC
Confidence 999999999988765 899999999999999999999 9999999998433 378999999999875333445555589
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHh-----cCceeEEcccCCCCCCCCCccchHHHH-HhhhcCCe---EEEEecccccccc
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKA-----KGHFPFFDMAYQGFASGDPERDAKAIR-IFLKDGHL---LGLAQSYAKNMGL 275 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~-----~~~~ii~De~Y~~~~~~~~~~~~~~~~-~~~~~~~~---~i~~~S~SK~~~~ 275 (337)
||||||.+++.+++++|+++|++ +|++||+||+|.++.++. ....++. .+....++ ++++.||||.||+
T Consensus 198 p~nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 275 (430)
T 2x5f_A 198 PNNPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYED--VYTQSLFTALTNLHSNAILPIRLDGATKEFFA 275 (430)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSS--SCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTC
T ss_pred CCCCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCc--ccchHHHHHHhhccCCcceEEEEEecccCCCC
Confidence 99999999999999999999999 999999999999987642 1111222 34332457 8999999999999
Q ss_pred cccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC-CHHHHHH
Q 047180 276 YGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG-DAELKKL 331 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~-~~~~~~~ 331 (337)
+|+|+||+++..+++++++.+........+..+.+++.++|.++..+|+ +.++.++
T Consensus 276 ~G~riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 332 (430)
T 2x5f_A 276 WGFRVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKE 332 (430)
T ss_dssp GGGCCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHH
T ss_pred CCCCeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHH
Confidence 9999999986334677766665432221222455689999999999998 8644333
No 26
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.4e-35 Score=286.48 Aligned_cols=269 Identities=14% Similarity=0.102 Sum_probs=193.3
Q ss_pred CCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-----h---cCcCCCCCCCCCCCHHHHHHHHHHH
Q 047180 35 KDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-----I---AGTANMEYLPMGGSVKMVEETLKLA 106 (337)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-----~---~~~~~~~Y~~~~G~~~lr~aia~~~ 106 (337)
++.+..+.+...+. .++.|+|+.|.|.. ..++...+..+... + ......+|.+..|+++||+++++|+
T Consensus 16 ~~~~~~~~~~~~~~-~~~~i~l~~G~p~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l 91 (425)
T 2r2n_A 16 PSPIRTMTDILSRG-PKSMISLAGGLPNP---NMFPFKTAVITVENGKTIQFGEEMMKRALQYSPSAGIPELLSWLKQLQ 91 (425)
T ss_dssp CCSGGGHHHHHHHS-CTTCEECCCCCCCG---GGCSEEEEEEEETTSCCEEECHHHHHHHTSCCCTTCCHHHHHHHHHHH
T ss_pred CchHHHHHHHhhcC-CCCeEEcCCcCCCc---hhCCHHHHHHHHhhcccccccccchhhhcCCCCCCCCHHHHHHHHHHH
Confidence 34455555444432 24689999997631 12221111110000 0 0011257999999999999999998
Q ss_pred hCCCCcccc-------cCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCC
Q 047180 107 YGDNSEFIK-------DKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTK 179 (337)
Q Consensus 107 ~~~~~~~~~-------~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~ 179 (337)
.+.++...+ ++ ++++|+|+++++.+++.++.+ |||+|++++|+|+.|...++..|++++.+|+. + +
T Consensus 92 ~~~~g~~~~~~~~~~~~~--~i~~t~G~~~al~~~~~~l~~--~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~-~--~ 164 (425)
T 2r2n_A 92 IKLHNPPTIHYPPSQGQM--DLCVTSGSQQGLCKVFEMIIN--PGDNVLLDEPAYSGTLQSLHPLGCNIINVASD-E--S 164 (425)
T ss_dssp HHHHCCTTTTSCGGGTCE--EEEEESSHHHHHHHHHHHHCC--TTCEEEEESSCCHHHHHHHGGGTCEEEEECEE-T--T
T ss_pred HHhcCCCCccccccCCcC--cEEEeCcHHHHHHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcCCEEEEeCcC-C--C
Confidence 543332221 12 368999999999999988866 89999999999999999999999999999983 3 4
Q ss_pred CCChHHHHHHHHcC----------CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 180 GLDFAALMDDIKNA----------PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 180 ~~d~~~l~~~l~~~----------~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
++|++.+++.+++. ++.++++++|+||||||.+++.+++++|+++|+++|++||+||+|.++.++.. .
T Consensus 165 ~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~--~ 242 (425)
T 2r2n_A 165 GIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKF--R 242 (425)
T ss_dssp EECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSS--C
T ss_pred CCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCC--C
Confidence 68999999988631 23456667789999999999999999999999999999999999999875311 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
..++..+. ..+++++++||||.|+ +|||+||++++ +++++++.. .......+++.++|.++..+|++
T Consensus 243 ~~~~~~~~-~~~~~i~~~s~SK~~~-~GlRiG~~~~~---~~l~~~l~~----~~~~~~~~~~~~~q~a~~~~l~~ 309 (425)
T 2r2n_A 243 VPTFLSMD-VDGRVIRADSFSKIIS-SGLRIGFLTGP---KPLIERVIL----HIQVSTLHPSTFNQLMISQLLHE 309 (425)
T ss_dssp CCCTGGGC-TTSCEEEEEESTTTTC-STTCCEEEEEE---HHHHHHHHH----HHHTTTCSSCHHHHHHHHHHHHH
T ss_pred CCCccccC-CCCCEEEEccchhhcc-CccceEEEecC---HHHHHHHHH----HHHHhcCCCCHHHHHHHHHHHHh
Confidence 11222232 2357999999999999 99999999863 455555443 23333346789999999999986
No 27
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=5.5e-36 Score=286.71 Aligned_cols=254 Identities=13% Similarity=0.041 Sum_probs=194.6
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc-CceeEEeeccc
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD-KRIAAVQSLSG 127 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~g~ 127 (337)
.+++|+|+.|.+ ..++++.+.+++.+. .....++|++..|..++|+++++|+...++...++ ++ +++|+|+
T Consensus 22 ~~~~i~l~~~~~-----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~--i~~~~g~ 94 (410)
T 3e2y_A 22 DPSVVNLGQGFP-----DISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEE--ILVAVGA 94 (410)
T ss_dssp STTSEECSSCCC-----CSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTS--EEEESHH
T ss_pred CCCeEEecCCCC-----CCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCC--EEEeCCc
Confidence 367999999964 244667888887664 33345689988899999999999985433332334 44 5789999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc---------CCCCCCChHHHHHHHHcCCCCeE
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH---------PGTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~---------~~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
++++.+++..+.. +||+|+++.|+|+.|...++..|.+++.+++.. ..++.+|++.+++.+.. +..
T Consensus 95 ~~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~---~~~ 169 (410)
T 3e2y_A 95 YGSLFNSIQGLVD--PGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSS---KTK 169 (410)
T ss_dssp HHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCT---TEE
T ss_pred HHHHHHHHHHhcC--CCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCC---Cce
Confidence 9999999988765 899999999999999999999999999998742 12456899999887742 344
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccc
Q 047180 199 FLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ 278 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 278 (337)
++++++||||||.+++.+++++|+++|+++|+++|+||+|.+|.++.. ...++..+....++++++.||||.||++|+
T Consensus 170 ~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~S~sK~~g~~G~ 247 (410)
T 3e2y_A 170 AIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGH--THVKIATLPGMWERTITIGSAGKTFSVTGW 247 (410)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSTTCGGGEEEEEEHHHHSSCGGG
T ss_pred EEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC--CCCCHHHcCCccCeEEEEecchhhcCCCCc
Confidence 444589999999999999999999999999999999999999876421 111222232233688999999999999999
Q ss_pred ccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 279 RVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 279 RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
|+||+++ ++++++.+.. .......+++.++|.++..+|+
T Consensus 248 r~G~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~ 286 (410)
T 3e2y_A 248 KLGWSIG---PAHLIKHLQT----VQQNSFYTCATPLQAALAEAFW 286 (410)
T ss_dssp CCEEEEC---CHHHHHHHHH----HHHTTTCCCCHHHHHHHHHHHH
T ss_pred eEEEEEE---CHHHHHHHHH----HHHhhccCCChHHHHHHHHHHH
Confidence 9999985 4555555432 3333334578899999998886
No 28
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=5.7e-36 Score=287.36 Aligned_cols=274 Identities=12% Similarity=0.077 Sum_probs=197.2
Q ss_pred cCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHh
Q 047180 29 NVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAY 107 (337)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~ 107 (337)
++...+...+..+........+.+.|||+.|.+. ..+++.+.+++.+. ......+|++..|..+||+++++|+.
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~g~~~idl~~g~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~ 99 (404)
T 2o1b_A 25 KLANIPDSYFGKTMGRKIEHGPLPLINMAVGIPD-----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVDFYQ 99 (404)
T ss_dssp HHHTSCCCTTC-------CCCSSCCEECCCCSCS-----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHHHHH
T ss_pred HhhhCCchHHHHHHHHHHhcCCCCEEecCCcCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Confidence 3444444444444433332333468999999752 23467788877664 32224579887899999999999984
Q ss_pred CCCCccccc-CceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHH
Q 047180 108 GDNSEFIKD-KRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAAL 186 (337)
Q Consensus 108 ~~~~~~~~~-~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l 186 (337)
...+...++ ++ +++|+|+++++.+++..+.. |||+|++++|+|+.|...++..|++++.+|+.. +++.+|++.+
T Consensus 100 ~~~g~~~~~~~~--v~~t~G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l 174 (404)
T 2o1b_A 100 RQYNVTLDKEDE--VCILYGTKNGLVAVPTCVIN--PGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKV 174 (404)
T ss_dssp HHHCCCCCTTTS--EEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGS
T ss_pred HHhCCCCCCccc--EEEcCCcHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHH
Confidence 332221233 44 57899999999999988765 899999999999999999999999999999843 4567899999
Q ss_pred HHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEE
Q 047180 187 MDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLA 266 (337)
Q Consensus 187 ~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (337)
++.+.. +.+++++ ++||||||.+++.+++++|+++|+++|++||+||+|.++.++. . ..++..+....++++++
T Consensus 175 ~~~l~~--~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~-~~~~~~~~~~~~~~i~~ 248 (404)
T 2o1b_A 175 DSQIID--KTKLIYL-TYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDA--K-NPSILASENGKDVAIEI 248 (404)
T ss_dssp CHHHHH--HEEEEEE-CSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSS--C-CCCGGGSTTHHHHEEEE
T ss_pred HHhhcc--CceEEEE-cCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--C-CCChhhcCCCCCCEEEE
Confidence 988862 2344444 7899999999999999999999999999999999999987531 1 11111121112478999
Q ss_pred ecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 267 QSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 267 ~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
.||||.||++|+|+||+++ ++++++++.. .......+++.++|.++..+|++
T Consensus 249 ~s~sK~~g~~G~r~G~~~~---~~~~~~~l~~----~~~~~~~~~~~~~~~a~~~~l~~ 300 (404)
T 2o1b_A 249 YSLSKGYNMSGFRVGFAVG---NKDMIQALKK----YQTHTNAGMFGALQDAAIYALNH 300 (404)
T ss_dssp EESTTTTTCGGGCCEEEEE---CHHHHHHHHH----HHHHHCCCCCHHHHHHHHHHHHH
T ss_pred EecchhccCchhheEeEec---CHHHHHHHHH----HHhhccCCCCHHHHHHHHHHHhc
Confidence 9999999999999999875 5666665543 22222346788999999999876
No 29
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=7.9e-36 Score=288.06 Aligned_cols=252 Identities=17% Similarity=0.104 Sum_probs=188.0
Q ss_pred CCeeEeeeeeeecCCCCccc-chHHHHHH--HH-hc--CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEee
Q 047180 51 PDKVNVGVGAYRDDNGKPVV-LECVREAE--RR-IA--GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQS 124 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~-~~~v~~a~--~~-~~--~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 124 (337)
+.+|||+.|.+.. ..++ .+.+.++. ++ +. ....++|++..|.++||+++++|+ + .++++ +++|
T Consensus 33 ~~~i~~~~G~p~~---~~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~-~-----~~~~~--i~~t 101 (427)
T 3ppl_A 33 NLKLDLTRGKPSS---EQLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL-G-----VPVEQ--VLAG 101 (427)
T ss_dssp CCCEECCCCSCCH---HHHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH-T-----SCGGG--EEEC
T ss_pred CceEecCCCCCCh---HHCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh-C-----CCcce--EEEe
Confidence 5689999997631 1222 22455554 33 22 223578999999999999999998 2 23454 5789
Q ss_pred ccchhHH--HHHHHHHhhhCC----------CCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc
Q 047180 125 LSGTGAC--RLFADFQKRFHP----------DSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN 192 (337)
Q Consensus 125 ~g~~~al--~~~~~~l~~~~p----------gd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~ 192 (337)
+|+++++ .+++.++....| ||+|++++|+|+.|...++..|++++.+|+.+ .++|++.+++++..
T Consensus 102 ~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~---~g~d~~~l~~~l~~ 178 (427)
T 3ppl_A 102 DASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNE---DGPDMDAVEELVKN 178 (427)
T ss_dssp SSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEET---TEECHHHHHHHTTS
T ss_pred CCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCC---CCCCHHHHHHHHhc
Confidence 9999999 467666654224 89999999999999999999999999999843 35999999998842
Q ss_pred CCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH-HhcCceeEEcccCCCCCCCCCccchHHHHHhh---hcCCeEEEEec
Q 047180 193 APNGSFFLLHACAHNPTGVDPSEEQWKEISYQI-KAKGHFPFFDMAYQGFASGDPERDAKAIRIFL---KDGHLLGLAQS 268 (337)
Q Consensus 193 ~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~-~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~---~~~~~~i~~~S 268 (337)
++.++++++++||||||.+++.+++++|+++| +++|++||+||+|.++.++.......++..+. ...+++++++|
T Consensus 179 -~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 257 (427)
T 3ppl_A 179 -PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTS 257 (427)
T ss_dssp -TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEE
T ss_pred -CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEec
Confidence 33456666779999999999999999999999 99999999999999976532111111122221 23468999999
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|||+ +++|+|+||+++ ++++++.+.. .......+++.+.|.++..+|++
T Consensus 258 ~SK~-~~~G~r~G~~~~---~~~l~~~~~~----~~~~~~~~~~~~~q~~~~~~l~~ 306 (427)
T 3ppl_A 258 TSKI-TLAGAGVSFFLT---SAENRKWYTG----HAGIRGIGPNKVNQLAHARYFGD 306 (427)
T ss_dssp STTT-SCTTSSCEEEEC---CHHHHHHHHH----HHHHHCSCCCHHHHHHHHHHHCS
T ss_pred hhhc-cCcCccEEEEEc---CHHHHHHHHH----HhhcccCCCCHHHHHHHHHHHhC
Confidence 9999 789999999986 4555555543 23333446789999999999998
No 30
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=7.6e-35 Score=277.02 Aligned_cols=254 Identities=16% Similarity=0.134 Sum_probs=191.6
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
+++.+||+.|.+. ...++.+.+++.+. .. ...+|++..|..++|+++++|+....+...++++ +++|+|++
T Consensus 29 g~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~--v~~~~g~~ 100 (388)
T 1j32_A 29 GIDVCSFSAGEPD-----FNTPKHIVEAAKAALEQ-GKTRYGPAAGEPRLREAIAQKLQRDNGLCYGADN--ILVTNGGK 100 (388)
T ss_dssp TCCCEECCCSSCS-----SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG--EEEESHHH
T ss_pred CCCEEECCCCCCC-----CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhh--EEEcCCHH
Confidence 3568999999642 33467777776653 33 2457988889999999999998533222233454 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.. +||+|++++|+|+.|...++..|.+++.+|+..++++.+|++.+++.+.. +..++++++||||
T Consensus 101 ~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~v~~~~p~np 175 (388)
T 1j32_A 101 QSIFNLMLAMIE--PGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITP---KTKLLVFNTPSNP 175 (388)
T ss_dssp HHHHHHHHHHCC--TTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHHHCCT---TEEEEEEESSCTT
T ss_pred HHHHHHHHHhcC--CCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHHhcCc---CceEEEEeCCCCC
Confidence 999999987755 89999999999999999999999999999874333578999999998852 3444445889999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh-cCCeEEEEecccccccccccccceeEeee
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK-DGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
||.+++.+++++|+++|+++|+++|+||+|.++.++.. ...++..+.. ...+++++.||||.||++|+|+||+++
T Consensus 176 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~-- 251 (388)
T 1j32_A 176 TGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDA--QHLSIGAASPEAYERSVVCSGFAKTYAMTGWRVGFLAG-- 251 (388)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHHTEEEEEESTTTTTCTTTCCEEEEC--
T ss_pred CCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC--CCCCHHHccccccCCEEEEeechhccCCcccceEEEEe--
Confidence 99999999999999999999999999999999875321 1111222211 123689999999999999999999985
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++.. .......+++.++|.++..+|+.
T Consensus 252 -~~~~~~~l~~----~~~~~~~~~~~~~~~a~~~~l~~ 284 (388)
T 1j32_A 252 -PVPLVKAATK----IQGHSTSNVCTFAQYGAIAAYEN 284 (388)
T ss_dssp -CHHHHHHHHH----HHHTTTCSCCHHHHHHHHHHHHS
T ss_pred -CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHHhC
Confidence 4555554433 33333346788999988888873
No 31
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=6e-35 Score=276.42 Aligned_cols=274 Identities=11% Similarity=0.048 Sum_probs=202.1
Q ss_pred CCCchhhHHHHHhcC-CCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCc
Q 047180 34 AKDPILGVTEAFLAD-PSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSE 112 (337)
Q Consensus 34 ~~~~~~~~~~~~~~~-~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~ 112 (337)
+++++..+...++.. ...+.|||+.|.+. ..+++.+.+++.+.. ....+|++..|..++|+++++|+.+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~~~g~~i~l~~~~~~-----~~~~~~v~~a~~~~~-~~~~~y~~~~g~~~lr~~la~~l~~~~g~ 78 (376)
T 3ezs_A 5 EPYPFERLRALLKEITPKKRGLDLGIGEPQ-----FETPKFIQDALKNHT-HSLNIYPKSAFEESLRAAQRGFFKRRFKI 78 (376)
T ss_dssp CCCHHHHHHHHHTTCCCSSCCCBCSSCCCC-----SCCCHHHHHHHHTTG-GGGGSCCCTTCCHHHHHHHHHHHHHHHSC
T ss_pred CcchHHHHHHHHHhhhccCCEEEeCCCCCC-----CCCCHHHHHHHHHhh-hhcCCCCCCCCCHHHHHHHHHHHHHHhCC
Confidence 344566666555442 22378999999642 335677888876632 33568998899999999999998543222
Q ss_pred ccccCceeEEeeccchhHHHHHHHHHhhhCC--CCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHH
Q 047180 113 FIKDKRIAAVQSLSGTGACRLFADFQKRFHP--DSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDI 190 (337)
Q Consensus 113 ~~~~~~i~~~~t~g~~~al~~~~~~l~~~~p--gd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l 190 (337)
..++++ +++|+|+++++.+++..+.. + ||+|+++.|+|+.|...++..|++++.+|+.+. .++++ .+++.+
T Consensus 79 ~~~~~~--i~~t~g~~~al~~~~~~~~~--~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~-~l~~~~ 151 (376)
T 3ezs_A 79 ELKENE--LISTLGSREVLFNFPSFVLF--DYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKE--NDFTP-SLNEKE 151 (376)
T ss_dssp CCCGGG--EEEESSSHHHHHHHHHHHTT--TCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGG--GTSCC-CCCHHH
T ss_pred CCCHHH--EEECcCcHHHHHHHHHHHcC--CCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCC--CCcch-hHHhhh
Confidence 234555 57899999999999988876 8 999999999999999999999999999998433 24444 555555
Q ss_pred HcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh-----cCCeEEE
Q 047180 191 KNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK-----DGHLLGL 265 (337)
Q Consensus 191 ~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-----~~~~~i~ 265 (337)
.. +.+++++ ++||||||.+++.+++++|+++|+++|+++|+||+|.++.++. . ..+...... ..+++++
T Consensus 152 ~~--~~~~v~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~i~ 225 (376)
T 3ezs_A 152 LQ--EVDLVIL-NSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENT--P-PPSLLEACMLAGNEAFKNVLV 225 (376)
T ss_dssp HH--HCSEEEE-CSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSS--C-CCCHHHHHHHTTCTTCTTEEE
T ss_pred cc--CCCEEEE-cCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCC--C-CCCHHHccccccccccCcEEE
Confidence 53 2345555 7999999999999999999999999999999999999987642 1 111211211 3468999
Q ss_pred EecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 266 AQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 266 ~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
+.||||.||++|+|+||+++ ++++++.+.. .......+++.++|.++..+|++.+..++.+
T Consensus 226 ~~s~sK~~g~~G~r~G~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 286 (376)
T 3ezs_A 226 IHSLSKRSSAPGLRSGFIAG---DSRLLEKYKA----FRAYLGYTSANAIQKASEAAWLDDRHAEFFR 286 (376)
T ss_dssp EEESTTTTTCGGGCCEEEEE---CHHHHHHHHH----HHTTTCCCCCHHHHHHHHHHHHCSHHHHHHH
T ss_pred EecchhccCCccceeEEEee---CHHHHHHHHH----HHhhhcCCCChHHHHHHHHHHhCcHHHHHHH
Confidence 99999999999999999875 5666555543 3333334678899999999998755444433
No 32
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.4e-35 Score=284.97 Aligned_cols=277 Identities=11% Similarity=0.041 Sum_probs=191.1
Q ss_pred cccCCCCCCCchhhHHH---HHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHH
Q 047180 27 WRNVEPAAKDPILGVTE---AFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEET 102 (337)
Q Consensus 27 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~ai 102 (337)
..++...+.+.+..+.. +++.+ +.+.|||+.|.+. ..+++.+.+++.+. .....++|++..|..+||+++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~idl~~g~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i 84 (412)
T 2x5d_A 11 FARIDRLPPYVFNITAELKMAARRR-GEDIIDLSMGNPD-----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAI 84 (412)
T ss_dssp ----------CHHHHHHHHHHHHHT-TCCCEECSSCCCC-----SCCCHHHHHHHHHTC---------CTTCCHHHHHHH
T ss_pred hHHHhhcCchHHHHHHHHHHHHhhc-CCCEEecCCCCCC-----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHH
Confidence 33444444444444333 23333 3568999999642 33567788887664 322356798888999999999
Q ss_pred HHHHhCCCCccccc-CceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCC
Q 047180 103 LKLAYGDNSEFIKD-KRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGL 181 (337)
Q Consensus 103 a~~~~~~~~~~~~~-~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~ 181 (337)
++|+....+...++ ++ +++|+|+++++.+++..+.. |||+|++++|+|+.|...++..|++++.+|+.++.++.+
T Consensus 85 a~~~~~~~g~~~~~~~~--v~~t~g~~~a~~~~~~~~~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 160 (412)
T 2x5d_A 85 SHWYRDRYDVQIDPESE--AIVTIGSKEGLAHLMLATLD--HGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFN 160 (412)
T ss_dssp HHHHHHHHCCCCCTTTS--EEEESCHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHH
T ss_pred HHHHHHHhCCCCCCCcC--EEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCC
Confidence 99984322221333 34 57899999999999988765 899999999999999999999999999998743223447
Q ss_pred ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCC
Q 047180 182 DFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGH 261 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 261 (337)
|++.+++.+.. +.+++++ ++||||||.+++.+++++|+++|+++|++||+||+|.++.++. ....++..+....+
T Consensus 161 d~~~l~~~i~~--~~~~v~l-~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~ 235 (412)
T 2x5d_A 161 ELERAIRESIP--KPRMMIL-GFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDG--WKAPSIMQVPGAKD 235 (412)
T ss_dssp HHHHHHHTEES--CCSEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTT--CCCCCGGGSTTGGG
T ss_pred CHHHHHHhccc--CceEEEE-CCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCC--CCCCChhhccCccC
Confidence 88999887752 3345555 7999999999999999999999999999999999999987521 11112222221135
Q ss_pred eEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 262 LLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 262 ~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+++++.||||.||++|+|+||+++ ++++++.+... ......+++.++|.++..+|++
T Consensus 236 ~~i~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~ 292 (412)
T 2x5d_A 236 IAVEFFTLSKSYNMAGWRIGFMVG---NPELVSALARI----KSYHDYGTFTPLQVAAIAALEG 292 (412)
T ss_dssp TEEEEEECC-CCSCTTSCCEEEEE---CHHHHHHHHHH----HHHHCCCCCHHHHHHHHHHHHS
T ss_pred cEEEEecCccccCCcccceEEEEc---CHHHHHHHHHH----HhhhccCCCHHHHHHHHHHHhC
Confidence 789999999999999999999986 56666655432 2222235788999999999985
No 33
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=6.9e-35 Score=278.14 Aligned_cols=275 Identities=16% Similarity=0.094 Sum_probs=202.6
Q ss_pred CCCCCCCchhhHHHHHhcC--CCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHh
Q 047180 30 VEPAAKDPILGVTEAFLAD--PSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAY 107 (337)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~ 107 (337)
+...+.+.+..+...+++. .+++.|+|+.|.+. ...++.+.+++.+.......+|++..|..+||+++++|+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~y~~~~g~~~lr~~la~~~~ 92 (389)
T 1o4s_A 18 ISEIPISKTMELDAKAKALIKKGEDVINLTAGEPD-----FPTPEPVVEEAVRFLQKGEVKYTDPRGIYELREGIAKRIG 92 (389)
T ss_dssp HHHSCCCSSHHHHHHHHHHHHTTCCCEECCCSSCS-----SCCCHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHH
T ss_pred HhhcCccHHHHHHHHHHHHHhcCCCEEEccCCCCC-----CCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHH
Confidence 4444555565555444332 23568999998642 2345778777765312223579888899999999999985
Q ss_pred CCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHH
Q 047180 108 GDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALM 187 (337)
Q Consensus 108 ~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~ 187 (337)
..++...++++ +++|+|+++++.+++..+.. |||+|++++|+|+.|...++..|++++.+|+..++++.+|++.++
T Consensus 93 ~~~g~~~~~~~--v~~~~g~t~al~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 168 (389)
T 1o4s_A 93 ERYKKDISPDQ--VVVTNGAKQALFNAFMALLD--PGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVE 168 (389)
T ss_dssp HHHTCCCCGGG--EEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHH
T ss_pred HHhCCCCCHHH--EEEecCHHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHH
Confidence 33222133454 57899999999999988755 899999999999999999999999999999843235788999999
Q ss_pred HHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEe
Q 047180 188 DDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQ 267 (337)
Q Consensus 188 ~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (337)
+.+++ +..++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++. ...++..+....++++++.
T Consensus 169 ~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g---~~~~~~~~~~~~~~~i~~~ 242 (389)
T 1o4s_A 169 GLLVG---KTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD---EFTSILDVSEGFDRIVYIN 242 (389)
T ss_dssp HTCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS---CCCCHHHHCSSSTTEEEEE
T ss_pred Hhccc---CceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC---CCCCHhhcCCCCCcEEEEe
Confidence 88753 33444458999999999999999999999999999999999999987531 1112233322235789999
Q ss_pred cccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 268 SYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 268 S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
||||.||++|+|+||+++ ++++++.+.. .......+++.++|.++..+|++.
T Consensus 243 s~sK~~~~~G~r~G~l~~---~~~~~~~l~~----~~~~~~~~~~~~~~~a~~~~l~~~ 294 (389)
T 1o4s_A 243 GFSKSHSMTGWRVGYLIS---SEKVATAVSK----IQSHTTSCINTVAQYAALKALEVD 294 (389)
T ss_dssp ESTTTTTCGGGCCEEEEC---CHHHHHHHHH----HHHHHTCSCCHHHHHHHHHHTTCC
T ss_pred echhhcCCcccceEEEEe---CHHHHHHHHH----HhhhcccCCCHHHHHHHHHHHhcc
Confidence 999999999999999986 4555555443 222223457888999999999863
No 34
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=5e-35 Score=280.99 Aligned_cols=281 Identities=15% Similarity=0.130 Sum_probs=201.9
Q ss_pred CCCCchhhHHHHHhcCCC-CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhC--
Q 047180 33 AAKDPILGVTEAFLADPS-PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYG-- 108 (337)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~-~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~-- 108 (337)
...+++..+...+.+... .+.|+|+.|.+... +...+++.+.+++.+. ......+|++..|..++|+++++|+.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~p~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~lr~~la~~~~~~~ 92 (416)
T 1bw0_A 14 LVFNPIRTVSDNAKPSPSPKPIIKLSVGDPTLD-KNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNSF 92 (416)
T ss_dssp TCCCHHHHHHHTCCCCCSCSCCEECCCCCTTTT-SCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHhhcCCCeEEecCcCCCcc-cCCCCCHHHHHHHHHHhhCCccCCcCCCCCCHHHHHHHHHHHHhhh
Confidence 333455555554433222 46899999975311 1345667788877653 333346798888999999999999861
Q ss_pred ----CCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChH
Q 047180 109 ----DNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFA 184 (337)
Q Consensus 109 ----~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~ 184 (337)
+.+...++++ +++|+|+++++.+++..+.. |||+|++++|+|+.|...++..|++++.+|+..++++.+|++
T Consensus 93 ~~~~~~~~~~~~~~--v~~~~g~~~al~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 168 (416)
T 1bw0_A 93 VHKEELKSTIVKDN--VVLCSGGSHGILMAITAICD--AGDYALVPQPGFPHYETVCKAYGIGMHFYNCRPENDWEADLD 168 (416)
T ss_dssp CCSTTTGGGCCGGG--EEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTTEECHH
T ss_pred cccccCCCCCCcce--EEEeCChHHHHHHHHHHhCC--CCCEEEEcCCCcHhHHHHHHHcCcEEEEeecCcccCCCCCHH
Confidence 2233344555 57899999999999988765 899999999999999999999999999999843334778999
Q ss_pred HHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc--chHHHHHhhhcCCe
Q 047180 185 ALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER--DAKAIRIFLKDGHL 262 (337)
Q Consensus 185 ~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~--~~~~~~~~~~~~~~ 262 (337)
.+++.+.. ++.++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++.... ...++..+. ...+
T Consensus 169 ~l~~~l~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~-~~~~ 244 (416)
T 1bw0_A 169 EIRRLKDD---KTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVADFE-TTVP 244 (416)
T ss_dssp HHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTSSC-CSCC
T ss_pred HHHHHhcc---CCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHHcc-CCCc
Confidence 99998752 23444457899999999999999999999999999999999999987532100 111111121 1236
Q ss_pred EEEEecccccccccccccceeEeeeCCH-HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 263 LGLAQSYAKNMGLYGQRVGCLSVLCEDE-KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 263 ~i~~~S~SK~~~~~G~RvG~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+++++||||.|+++|+|+||+++. ++ +.++.+...+.......+ +++.++|.++..+|+.
T Consensus 245 ~i~~~s~sK~~~~~Glr~G~~~~~--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~a~~~~l~~ 305 (416)
T 1bw0_A 245 RVILGGTAKNLVVPGWRLGWLLYV--DPHGNGPSFLEGLKRVGMLVC-GPCTVVQAALGEALLN 305 (416)
T ss_dssp EEEEEESTTTTSCGGGCCEEEEEE--CTTCSCHHHHHHHHHHHHHHT-CSCHHHHHHHHHHHHS
T ss_pred EEEEecchhhCCCCCceEEEEEee--CchhhHHHHHHHHHHHhcccc-CCCcHHHHHHHHHHhc
Confidence 899999999999999999999874 33 233344433332221233 5788999999999874
No 35
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=7.5e-35 Score=277.08 Aligned_cols=252 Identities=11% Similarity=0.069 Sum_probs=190.7
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC-ceeEEeeccch
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK-RIAAVQSLSGT 128 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g~~ 128 (337)
++.|+|+.|.+. +.+++.+.+++.+. .. ...+|++..|..+||+++++|+....+...+++ + +++|+|++
T Consensus 30 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~--v~~~~g~~ 101 (386)
T 1u08_A 30 HQAINLSQGFPD-----FDGPRYLQERLAHHVAQ-GANQYAPMTGVQALREAIAQKTERLYGYQPDADSD--ITVTAGAT 101 (386)
T ss_dssp TTCEECCCSSCS-----SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTT--EEEESSHH
T ss_pred CCeEEecCCCCC-----CCCCHHHHHHHHHHHHh-hccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCC--EEEcCChH
Confidence 468999999652 33567788877654 32 246798888999999999999843222113344 5 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.. +||+|++++|+|+.|...++..|++++.+|+.. +++++|++.+++.+. + +..++++++||||
T Consensus 102 ~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~--~-~~~~v~l~~p~np 175 (386)
T 1u08_A 102 EALYAAITALVR--NGDEVICFDPSYDSYAPAIALSGGIVKRMALQP-PHFRVDWQEFAALLS--E-RTRLVILNTPHNP 175 (386)
T ss_dssp HHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECCT-TTCCCCHHHHHHHCC--T-TEEEEEEESSCTT
T ss_pred HHHHHHHHHhCC--CCCEEEEeCCCchhHHHHHHHcCCEEEEeecCc-ccCcCCHHHHHHhhc--c-cCEEEEEeCCCCC
Confidence 999999988765 899999999999999999999999999999843 357899999999885 2 3344445799999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|+++|++||+||+|.++.++.. ...++..+....++++++.||||.||++|+|+||+++
T Consensus 176 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~--- 250 (386)
T 1u08_A 176 SATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQ--GHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVA--- 250 (386)
T ss_dssp TCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSS--CCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEEC---
T ss_pred CCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCC--CCcChhcccCccCcEEEEecchhhcCCcccceEEEEc---
Confidence 99999999999999999999999999999999876311 1111222221235789999999999999999999986
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++.. .......+++.+.|.++..+|++
T Consensus 251 ~~~~~~~l~~----~~~~~~~~~~~~~~~a~~~~l~~ 283 (386)
T 1u08_A 251 PAPISAEIRK----VHQYLTFSVNTPAQLALADMLRA 283 (386)
T ss_dssp CHHHHHHHHH----HHHHHTSSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHH----HHHhhccCCChHHHHHHHHHHhC
Confidence 4555555543 22212234678899999888874
No 36
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=4.3e-35 Score=284.52 Aligned_cols=253 Identities=14% Similarity=0.131 Sum_probs=186.6
Q ss_pred CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-c----CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 48 DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-A----GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 48 ~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~----~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
..+.++|||+.|.+. ...++.|.+++.+. . ....++|++..|.++||+++++|+. ++...++++ ++
T Consensus 66 ~~~~~~i~l~~g~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~--i~ 136 (449)
T 3qgu_A 66 NPDAKIISLGIGDTT-----EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGALREAVASTFY--GHAGRAADE--IF 136 (449)
T ss_dssp CTTCCCEECSSCCCC-----CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGG--EE
T ss_pred CCCCCEEEeeCCCCC-----CCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHH--EE
Confidence 445679999999532 33566777766543 2 1345689988999999999999986 333344554 57
Q ss_pred eeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCce----------eeEeeeccCCCCCCChHHHHHHHHc
Q 047180 123 QSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVT----------QRTFHYYHPGTKGLDFAALMDDIKN 192 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~----------~~~~~~~~~~~~~~d~~~l~~~l~~ 192 (337)
+|+|+++++.++ ..+.+ |||+|++++|+|+.|...++..|++ ++.+|+.+.+++..|+++.
T Consensus 137 ~t~G~~~al~~~-~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 207 (449)
T 3qgu_A 137 ISDGSKCDIARI-QMMFG--SKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMVCNPDNHFFPDLSKA------ 207 (449)
T ss_dssp EESCHHHHHHHH-HHHHC--SSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEECCGGGTTCCCGGGC------
T ss_pred EccCHHHHHHHH-HHHhC--CCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEecccccCCcCChhHc------
Confidence 899999999988 55555 8999999999999999999999998 9999885433455554332
Q ss_pred CCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccc
Q 047180 193 APNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKN 272 (337)
Q Consensus 193 ~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 272 (337)
++.+++++ ++||||||.+++.++|++|+++|+++|++||+||+|.+|.++. ....++..+....++++++.||||.
T Consensus 208 -~~~~~v~l-~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~ 283 (449)
T 3qgu_A 208 -KRTDIIFF-CSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNP--DCPKTIYEIPGADEVAIETCSFSKY 283 (449)
T ss_dssp -CCCSEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCT--TSCSSGGGSTTGGGTEEEEEECSGG
T ss_pred -CCCCEEEE-eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCC--CCCCCHhhccCCCCcEEEEecchhh
Confidence 23455565 6899999999999999999999999999999999999987642 1111233232223578999999999
Q ss_pred ccccccccceeEeeeCCHHHHHH----HHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 273 MGLYGQRVGCLSVLCEDEKQAVA----VKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 273 ~~~~G~RvG~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
||++|+|+||++++ +++++. +...+.......+++++.++|.++..+|++
T Consensus 284 ~g~~G~r~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 337 (449)
T 3qgu_A 284 AGFTGVRLGWTVVP---KALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQP 337 (449)
T ss_dssp GTCTTCCCEEEECC---TTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSH
T ss_pred cCCccceeEEEecC---HHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhh
Confidence 99999999999873 222221 111222223345567889999999999986
No 37
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=6.2e-35 Score=282.05 Aligned_cols=248 Identities=15% Similarity=0.156 Sum_probs=180.4
Q ss_pred CCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-c----CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 49 PSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-A----GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 49 ~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~----~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
...++|+|++|.+. ...++.|.+|+.+. . ....++|++..|.++||+++++|+.+ +...++++ +++
T Consensus 54 ~~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~--~~~~~~~~--i~~ 124 (432)
T 3ei9_A 54 PDAQVISLGIGDTT-----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYG--GLGIGDDD--VFV 124 (432)
T ss_dssp TTCCCEECSSCCCC-----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHT--TTTCCGGG--EEE
T ss_pred CCCCeEEccCCCCC-----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHc--cCCCCcce--EEE
Confidence 34579999999653 34566677666543 2 13346898889999999999999863 22234555 578
Q ss_pred eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCc------------eeeEeeeccCCCCCCChHHHHHHHH
Q 047180 124 SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHV------------TQRTFHYYHPGTKGLDFAALMDDIK 191 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~------------~~~~~~~~~~~~~~~d~~~l~~~l~ 191 (337)
|+|+++++.++ ..+.+ |||+|++++|+|+.|...++..|. +++.+|+.+..++..|++.
T Consensus 125 t~G~~~al~~l-~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~------ 195 (432)
T 3ei9_A 125 SDGAKCDISRL-QVMFG--SNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST------ 195 (432)
T ss_dssp ESCHHHHHHHH-HHHHC--TTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG------
T ss_pred CCChHHHHHHH-HHHcC--CCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEEeccCcccCCcCChhh------
Confidence 99999999875 44444 899999999999999999988884 6777877433234445432
Q ss_pred cCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccc
Q 047180 192 NAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAK 271 (337)
Q Consensus 192 ~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 271 (337)
.++.+++++ |+||||||.+++.+++++|+++|+++|++||+||+|.+|.++. ...++..+....++++++.||||
T Consensus 196 -~~~~~~v~l-~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~---~~~~~~~~~~~~~~~i~~~S~SK 270 (432)
T 3ei9_A 196 -VGRTDIIFF-CSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDD---NPRSIFEIPGAEEVAMETASFSN 270 (432)
T ss_dssp -CCCCSEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSS---CCSSGGGSTTGGGTEEEEEESHH
T ss_pred -CCCCCEEEE-eCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCC---CCCChhhcCCCCCeEEEEecchh
Confidence 233455555 7899999999999999999999999999999999999997642 11122223222357899999999
Q ss_pred cccccccccceeEeeeCCHH-------HHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 272 NMGLYGQRVGCLSVLCEDEK-------QAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 272 ~~~~~G~RvG~~~~~~~~~~-------~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+||++|+|+||++++ ++. +++.+. ......+++++.++|.++..+|.+
T Consensus 271 ~~g~~G~r~G~~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~ 325 (432)
T 3ei9_A 271 YAGFTGVRLGWTVIP--KKLLYSDGFPVAKDFN----RIICTCFNGASNISQAGALACLTP 325 (432)
T ss_dssp HHCTTTTCCEEEECC--TTCBCTTSCBHHHHHH----HHHHHSCCCSCHHHHHHHHHHSSH
T ss_pred ccCCcccceEEEEEC--hHHhhcchHHHHHHHH----HHhccccCCCCHHHHHHHHHHHhc
Confidence 999999999999873 222 133332 222334556889999999999985
No 38
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=4.2e-35 Score=277.89 Aligned_cols=252 Identities=13% Similarity=0.082 Sum_probs=191.0
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC-ceeEEeeccc
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK-RIAAVQSLSG 127 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g~ 127 (337)
+.+.|||+.|.+. ...++.+.+++.+. .....++|++..|..++|+++++|+....+...+++ + +++|+|+
T Consensus 24 g~~~idl~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~--v~~~~g~ 96 (376)
T 2dou_A 24 GVGLIDLSIGSTD-----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRRE--ALALIGS 96 (376)
T ss_dssp TCCCEECSSCCCC-----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTS--EEEESSH
T ss_pred CCCEEeccCCCCC-----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCcc--EEEcCCc
Confidence 3568999999652 23467788887664 333356787767899999999999843322212333 4 5789999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
++++.+++..+.+ |||+|+++.|+|+.|...++..|++++.+|+ + +++.+|++.+++.+.. +.++++ +++|||
T Consensus 97 ~~a~~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~-~-~~~~~d~~~l~~~l~~--~~~~v~-l~~p~n 169 (376)
T 2dou_A 97 QEGLAHLLLALTE--PEDLLLLPEVAYPSYFGAARVASLRTFLIPL-R-EDGLADLKAVPEGVWR--EAKVLL-LNYPNN 169 (376)
T ss_dssp HHHHHHHHHHHCC--TTCEEEEESSCCHHHHHHHHHTTCEEEEECB-C-TTSSBCGGGSCHHHHH--HEEEEE-ECSSCT
T ss_pred HHHHHHHHHHhcC--CCCEEEECCCCcHhHHHHHHHcCCEEEEeeC-C-CCCCCCHHHHHHhhcc--CceEEE-ECCCCC
Confidence 9999999988765 8999999999999999999999999999987 3 3567899999988862 234444 478999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
|||.+++.+++++|+++|+++|++||+||+|.++.++. .. .+...+....++++++.||||.||++|+|+||+++
T Consensus 170 ptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~--~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-- 244 (376)
T 2dou_A 170 PTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEG--EA-PSPLALPGAKERVVELFSLSKSYNLAGFRLGFALG-- 244 (376)
T ss_dssp TTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS--CC-CCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEE--
T ss_pred CcCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCC--CC-CChhhcCCCCCcEEEEecchhhcCChhheeEEEec--
Confidence 99999999999999999999999999999999987531 11 11111112235789999999999999999999875
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++... ......+++.++|.++..+|++
T Consensus 245 -~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~ 277 (376)
T 2dou_A 245 -SEEALARLERV----KGVIDFNQYAGVLRMGVEALKT 277 (376)
T ss_dssp -CHHHHHHHHHH----HHHHCCCSCHHHHHHHHHHHTS
T ss_pred -CHHHHHHHHHH----HHhcccCCCHHHHHHHHHHHhC
Confidence 56666655432 2222235678999999999987
No 39
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=3.7e-35 Score=283.45 Aligned_cols=273 Identities=13% Similarity=0.055 Sum_probs=201.5
Q ss_pred hhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC
Q 047180 39 LGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK 117 (337)
Q Consensus 39 ~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~ 117 (337)
+.....+....+++.|||+.|.+. ..+++.+.+++.+. ......+|++..|..++|+++++|+...++...+++
T Consensus 32 ~~~~~~~~~~~g~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~ 106 (437)
T 3g0t_A 32 VALVTNLEKATGTKFCRMEMGVPG-----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKLFVNIDIPAR 106 (437)
T ss_dssp HHHHHHHHHHHTCCCEECCCCSCC-----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHHHHCCCCCGG
T ss_pred HHHHHHHHHhcCCCEEeccCcCCC-----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHHhhCCCCCcc
Confidence 333333333334679999999752 34567788777653 322236899989999999999999864333334455
Q ss_pred ceeEEeeccchhHHHHHHHHHh--hhCCCC--eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC
Q 047180 118 RIAAVQSLSGTGACRLFADFQK--RFHPDS--QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA 193 (337)
Q Consensus 118 ~i~~~~t~g~~~al~~~~~~l~--~~~pgd--~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 193 (337)
+ +++|+|+++++.+++..+. . +|| +|+++.|+|+.|...++..|++++.+|+. ++++.+|++.+++.+..
T Consensus 107 ~--i~~t~g~t~al~~~~~~l~~~~--~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~- 180 (437)
T 3g0t_A 107 A--CVPTVGSMQGCFVSFLVANRTH--KNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLESYLQT- 180 (437)
T ss_dssp G--EEEESHHHHHHHHHHHHHTTSC--TTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHHHHTT-
T ss_pred c--EEEeCCHHHHHHHHHHHHhcCC--CCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHHHHhc-
Confidence 5 5789999999999998886 5 899 99999999999999999999999999984 44677899999999843
Q ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch---HHH-HHhhhcCCeEEEEecc
Q 047180 194 PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA---KAI-RIFLKDGHLLGLAQSY 269 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~---~~~-~~~~~~~~~~i~~~S~ 269 (337)
++.+++++ ++||||||.+++.+++++|+++|+++|++||+||+|.++.++.. ... .++ ..+....++++++.||
T Consensus 181 ~~~~~v~l-~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~ 258 (437)
T 3g0t_A 181 GQFCSIIY-SNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKD-YSHPGEPLYQPSVANYTDNYILALSS 258 (437)
T ss_dssp TCCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSC-CCSTTSSCCCCCGGGTCSCEEEEEES
T ss_pred CCceEEEE-eCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCC-cCcccccchhhccCCCCCcEEEEEcC
Confidence 23345554 78999999999999999999999999999999999998875411 110 000 2232335688999999
Q ss_pred cccccccccccceeEeeeCCHHHHH-HH---HH----------HHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 270 AKNMGLYGQRVGCLSVLCEDEKQAV-AV---KS----------QLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 270 SK~~~~~G~RvG~~~~~~~~~~~~~-~~---~~----------~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
||.||++|+|+||+++ ++++++ .+ .. .+.........+++.++|.++..+|++.+
T Consensus 259 sK~~~~~G~r~G~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~ 327 (437)
T 3g0t_A 259 SKAFSYAGQRIGVLMI---SGKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKACN 327 (437)
T ss_dssp TTTTSCGGGCCEEEEE---CHHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHHH
T ss_pred ccCCCCccceeEEEEE---CHHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCcH
Confidence 9999999999999986 355444 30 00 03333333344678999999999998643
No 40
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=1e-33 Score=273.15 Aligned_cols=264 Identities=16% Similarity=0.211 Sum_probs=195.0
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcC-----------cCCCCCCCCCCCHHHHHHHHHHHhCCCCcc--cccCc
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAG-----------TANMEYLPMGGSVKMVEETLKLAYGDNSEF--IKDKR 118 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~-----------~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~--~~~~~ 118 (337)
..|+|+.++ ++..++.+.+++..... .....|++..|..+||+++++|+....++. .++++
T Consensus 37 ~~i~l~~~~------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 37 GVIQMGLAE------NQLCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp SBEECSSCC------CCSSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred ceeeecccc------chhhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 578888653 34455677777664210 113579888899999999999985322221 33455
Q ss_pred eeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH-HhcCceeeEeeeccCCCCCCChHHHHHHHHcC---C
Q 047180 119 IAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW-RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---P 194 (337)
Q Consensus 119 i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~-~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~ 194 (337)
+++|+|+++++.+++..+.. |||+|++++|+|+.|...+ +..|++++.+|+..++++++|++.+++.+... .
T Consensus 111 --i~~~~G~~~ai~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~ 186 (428)
T 1iay_A 111 --VVMAGGATGANETIIFCLAD--PGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSN 186 (428)
T ss_dssp --CEEEEHHHHHHHHHHHHHCC--TTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTT
T ss_pred --EEEccChHHHHHHHHHHhCC--CCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcC
Confidence 47899999999999988766 8999999999999998755 46899999998843345789999999988641 1
Q ss_pred CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-------CCeEEEEe
Q 047180 195 NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-------GHLLGLAQ 267 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-------~~~~i~~~ 267 (337)
.+..++++++||||||.+++.+++++|+++|++++++||+||+|.++.++.. ...++..+... .++++++.
T Consensus 187 ~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~viv~~ 264 (428)
T 1iay_A 187 IKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP--QFVSIAEILDEQEMTYCNKDLVHIVY 264 (428)
T ss_dssp CCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS--CCCCHHHHHTSGGGTTSCTTSEEEEE
T ss_pred CceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCC--CccCHHHhccccccccCCCCcEEEEe
Confidence 2344455589999999999999999999999999999999999999765311 11122223322 36899999
Q ss_pred cccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 268 SYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 268 S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
||||.||++|+|+||+++ +++++++.+.. .. .. .+++.++|.++..+|++.++.++|.++
T Consensus 265 s~sK~~g~~Glr~G~~~~--~~~~~~~~~~~----~~-~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~ 324 (428)
T 1iay_A 265 SLSKDMGLPGFRVGIIYS--FNDDVVNCARK----MS-SF-GLVSTQTQYFLAAMLSDEKFVDNFLRE 324 (428)
T ss_dssp ESTTTSSCGGGCEEEEEE--SCHHHHHHHHH----HH-TT-SCCCHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cchhhcCCCCceEEEEEe--CCHHHHHHHHH----HH-hc-ccCCHHHHHHHHHHhcChHHHHHHHHH
Confidence 999999999999999986 46666665543 21 22 357889999999999987644444443
No 41
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4e-35 Score=280.26 Aligned_cols=254 Identities=13% Similarity=0.081 Sum_probs=192.2
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc-CceeEEeeccchh
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD-KRIAAVQSLSGTG 129 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~g~~~ 129 (337)
..|||+.|.+. + ..+++.+.+|+.+. ......+|.+..|..++++++++++....+...++ ++ +++|+|+++
T Consensus 40 ~~id~~~g~~~---~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~--i~~~~g~~~ 113 (407)
T 3nra_A 40 RPVDFSHGDVD---A-HEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDG--LIITPGTQG 113 (407)
T ss_dssp CCEETTSCCTT---T-SCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTS--EEEESHHHH
T ss_pred ceeeecCcCCC---C-CCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCc--EEEeCCcHH
Confidence 36999998642 2 34567787776653 32223469888999999999999984432222323 34 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc----CCCCCCChHHHHHHHHcCCCCeEEEEeCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH----PGTKGLDFAALMDDIKNAPNGSFFLLHACA 205 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~----~~~~~~d~~~l~~~l~~~~~~~~ili~~~p 205 (337)
++.+++..+.. +||+|+++.|+|+.|...++..|++++.+|+.. ++++++|++.+++.+.+ +.+++++ ++|
T Consensus 114 a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~--~~~~v~~-~~p 188 (407)
T 3nra_A 114 ALFLAVAATVA--RGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKA--GARVFLF-SNP 188 (407)
T ss_dssp HHHHHHHTTCC--TTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHT--TCCEEEE-ESS
T ss_pred HHHHHHHHhCC--CCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhh--CCcEEEE-cCC
Confidence 99999887755 899999999999999999999999999998721 24688999999999974 3344444 789
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh-hcCCeEEEEecccccccccccccceeE
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL-KDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
|||||.+++.+++++|+++|+++|+++|+||+|.++.++. ....++..+. ...++++++.||||.||++|+|+||++
T Consensus 189 ~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~ 266 (407)
T 3nra_A 189 NNPAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAG--ASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAF 266 (407)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTT--CCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEE
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCC--CCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEE
Confidence 9999999999999999999999999999999999987642 1111222222 223578999999999999999999998
Q ss_pred eeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 285 VLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+ ++++++.+.. .......+++.++|.++..+|++
T Consensus 267 ~---~~~~~~~l~~----~~~~~~~~~~~~~~~a~~~~l~~ 300 (407)
T 3nra_A 267 G---SRAIIARMEK----LQAIVSLRAAGYSQAVLRGWFDE 300 (407)
T ss_dssp E---CHHHHHHHHH----HHHHHTSSSCHHHHGGGGGTTCC
T ss_pred c---CHHHHHHHHH----HHhhhccCCChHHHHHHHHHHhc
Confidence 5 5666555543 22333345678889988888875
No 42
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.9e-34 Score=275.58 Aligned_cols=273 Identities=16% Similarity=0.077 Sum_probs=197.6
Q ss_pred ccCCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHH
Q 047180 28 RNVEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLA 106 (337)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~ 106 (337)
+++...+.+.+..+.. +... ++.|||+.|.+. ..+++.+.+++.+. .. ...+|++..|..+||+++++|+
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~--~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la~~~ 75 (411)
T 2o0r_A 5 SRLRPYATTVFAEMSA-LATR--IGAVNLGQGFPD-----EDGPPKMLQAAQDAIAG-GVNQYPPGPGSAPLRRAIAAQR 75 (411)
T ss_dssp GGGGGGSSCHHHHHHH-HHHT--TTCEESSCSSCS-----SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHH
T ss_pred hHhHhcCccHHHHHHH-Hhhc--CCeeeccCcCCC-----CCCCHHHHHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHH
Confidence 3444444444434433 3222 358999998642 23567787777653 32 2567988889999999999998
Q ss_pred hCCCCcccccC-ceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccC-CCCCCChH
Q 047180 107 YGDNSEFIKDK-RIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHP-GTKGLDFA 184 (337)
Q Consensus 107 ~~~~~~~~~~~-~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~-~~~~~d~~ 184 (337)
....+...+++ + +++|+|+++++.+++..+.. |||+|++++|+|+.|...++..|.+++.+|+..+ .++.+|++
T Consensus 76 ~~~~g~~~~~~~~--v~~t~g~~~al~~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~ 151 (411)
T 2o0r_A 76 RRHFGVDYDPETE--VLVTVGATEAIAAAVLGLVE--PGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDAD 151 (411)
T ss_dssp HHHHCCCCCTTTS--EEEEEHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHH
T ss_pred HHHcCCCCCCCce--EEEeCCHHHHHHHHHHHhcC--CCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHH
Confidence 43222213344 4 57899999999999987765 8999999999999999999999999999987432 24668999
Q ss_pred HHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEE
Q 047180 185 ALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLG 264 (337)
Q Consensus 185 ~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 264 (337)
.+++.++. +..++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++. ....++..+.....+++
T Consensus 152 ~l~~~l~~---~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~i 226 (411)
T 2o0r_A 152 ALRRAVTP---RTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDH--ARHLPLAGFDGMAERTI 226 (411)
T ss_dssp HHHHHCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTT--CCCCCGGGSTTTGGGEE
T ss_pred HHHHhhcc---CceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC--CCCcChhhccCCCCCEE
Confidence 99998852 33444457999999999999999999999999999999999999987531 11112222221135789
Q ss_pred EEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 265 LAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 265 ~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++.||||.||++|+|+||+++ ++++++.+... ......+++.+.|.++..+|+.
T Consensus 227 ~~~s~sK~~~~~G~r~G~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~ 280 (411)
T 2o0r_A 227 TISSAAKMFNCTGWKIGWACG---PAELIAGVRAA----KQYLSYVGGAPFQPAVALALDT 280 (411)
T ss_dssp EEEEHHHHTTCTTTCEEEEEC---CHHHHHHHHHH----HHHHTSCCCTTHHHHHHHHHHH
T ss_pred EEeechhhcCCccceEEEEee---CHHHHHHHHHH----HhhccCCCChHHHHHHHHHHhC
Confidence 999999999999999999986 46666655432 2211224567889888888874
No 43
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.3e-33 Score=273.11 Aligned_cols=263 Identities=17% Similarity=0.215 Sum_probs=197.5
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcC------------CCCCCCCCCCHHHHHHHHHHHhC--CCCcccccC
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTA------------NMEYLPMGGSVKMVEETLKLAYG--DNSEFIKDK 117 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~------------~~~Y~~~~G~~~lr~aia~~~~~--~~~~~~~~~ 117 (337)
..|+|+++. ++...+.+.+++++..... ..+|++..|.++||+++++|+.. .+....+++
T Consensus 39 ~~i~lg~~~------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~ 112 (435)
T 3piu_A 39 GIIQMGLAE------NQLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPN 112 (435)
T ss_dssp SBEECSSCC------CCSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGG
T ss_pred CeEEecccc------ccccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHH
Confidence 467888753 4566778888776641111 14699999999999999999852 112223445
Q ss_pred ceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 118 RIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 118 ~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
+ +++|+||++++.+++.++.+ +||+|+++.|+|+.|...++ ..|++++.+++....++.+|++.+++.+++.
T Consensus 113 ~--v~~~~gg~~a~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 188 (435)
T 3piu_A 113 H--LVLTAGATSANETFIFCLAD--PGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKR 188 (435)
T ss_dssp G--EEEEEHHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHT
T ss_pred H--EEEcCChHHHHHHHHHHhcC--CCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhc
Confidence 4 57899999999999988866 89999999999999998888 7999999999854445789999999988741
Q ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc---------CCeEE
Q 047180 194 PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD---------GHLLG 264 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~---------~~~~i 264 (337)
..+..++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++.. ...++..+... .++++
T Consensus 189 ~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~--~~~~~~~~~~~~~~d~~~~~~~~~i 266 (435)
T 3piu_A 189 NLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP--SFISVMEVLKDRNCDENSEVWQRVH 266 (435)
T ss_dssp TCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS--CCCCHHHHHHC-------CGGGGEE
T ss_pred CCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC--CCcCHHHhccccccccccCCCCCEE
Confidence 12344555588999999999999999999999999999999999999765421 11122223222 46789
Q ss_pred EEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 265 LAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 265 ~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
++.||||.||++|+|+||+++ +++.+.+.+.. .. .+.+.+.+.|.++..+|++.++.++|.+
T Consensus 267 ~i~s~sK~~g~~G~r~G~~~~--~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 328 (435)
T 3piu_A 267 VVYSLSKDLGLPGFRVGAIYS--NDDMVVAAATK----MS--SFGLVSSQTQHLLSAMLSDKKLTKNYIA 328 (435)
T ss_dssp EEEESSSSSCCGGGCEEEEEE--SCHHHHHHHHH----HG--GGSCCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEEeeecccCCCceeEEEEEe--CCHHHHHHHHH----Hh--hcCCCCHHHHHHHHHHhcChHHHHHHHH
Confidence 999999999999999999976 46665554432 21 2234678899999999998766554443
No 44
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=4.8e-34 Score=275.43 Aligned_cols=260 Identities=15% Similarity=0.082 Sum_probs=188.4
Q ss_pred hhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-h--cC-cCCCCCCCCCCCHHHHHHHHHHHhCCCCcc
Q 047180 38 ILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-I--AG-TANMEYLPMGGSVKMVEETLKLAYGDNSEF 113 (337)
Q Consensus 38 ~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~--~~-~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~ 113 (337)
++....+++.. ..+|||+.|.+.. ...++++.+.+++.+ + .. ....+|++..|.++||+++++|+ +
T Consensus 21 ~~~~~~~l~~~--~~~i~l~~g~~~~--~~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~-~----- 90 (422)
T 3d6k_A 21 VTAKYAELKAK--NLSLDLTRGKPSA--EQLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL-G----- 90 (422)
T ss_dssp HHHHHHHHHHT--TCCEECCCCSCCH--HHHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH-T-----
T ss_pred HHHHHHHHhcc--CCeEeCCCCCCCh--hhCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh-C-----
Confidence 33444444443 3489999997520 002334456665432 1 12 23568999999999999999998 2
Q ss_pred cccCceeEEeeccchhHH--HHHHHHHhhhCC------------CCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCC
Q 047180 114 IKDKRIAAVQSLSGTGAC--RLFADFQKRFHP------------DSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTK 179 (337)
Q Consensus 114 ~~~~~i~~~~t~g~~~al--~~~~~~l~~~~p------------gd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~ 179 (337)
.++++ +++|+|+++++ .+++.++.. + +|+|++++|+|+.|...++..|++++.+|+. + .
T Consensus 91 ~~~~~--i~~t~G~~~al~l~~~~~~l~~--~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~ 163 (422)
T 3d6k_A 91 LPADL--VVAQDGSSLNIMFDLISWSYTW--GNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMT-D--E 163 (422)
T ss_dssp CCGGG--EEECSSCHHHHHHHHHHHHHHH--CCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEE-T--T
T ss_pred CChhH--EEEecchHHHHHHHHHHHHhcC--cccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCC-C--C
Confidence 23455 57899999987 666676665 5 3479999999999999999999999999984 3 3
Q ss_pred CCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHH-hcCceeEEcccCCC--CCCCCCccchHHHHHh
Q 047180 180 GLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIK-AKGHFPFFDMAYQG--FASGDPERDAKAIRIF 256 (337)
Q Consensus 180 ~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~-~~~~~ii~De~Y~~--~~~~~~~~~~~~~~~~ 256 (337)
++|++.+++.++.. +.++++++|+||||||.+++.+++++|+++|+ ++|++||+||+|.+ |..+. ....++..+
T Consensus 164 g~d~~~l~~~l~~~-~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~--~~~~~~~~~ 240 (422)
T 3d6k_A 164 GPDMGVVRELVKDP-QVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEF--PIVHNVIEF 240 (422)
T ss_dssp EECHHHHHHHHTST-TEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCC--CCCCCHHHH
T ss_pred CCCHHHHHHHHhcC-CCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCC--CCCcChhhH
Confidence 59999999988631 23455657999999999999999999999999 99999999999986 54321 111122222
Q ss_pred ---hhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 257 ---LKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 257 ---~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
....+++++++||||. +++|+|+||+++ ++++++.+.. .......+++.++|.++..+|++
T Consensus 241 ~~~~~~~~~~i~~~S~SK~-~~~GlriG~~~~---~~~l~~~l~~----~~~~~~~~~~~~~q~a~~~~l~~ 304 (422)
T 3d6k_A 241 AQAAGNPNRFWFMSSTSKI-THAGSGVSFFAS---SKENIEWYAS----HANVRGIGPNKLNQLAHAQFFGD 304 (422)
T ss_dssp HHHTTCTTCEEEEEESTTT-SCTTSSCEEEEC---CHHHHHHHHH----HHHHHCSCCCHHHHHHHHHHHCS
T ss_pred hhccCCCCcEEEEcChhhh-cCcccceEEEEe---CHHHHHHHHH----HHHhhcCCCCHHHHHHHHHHHhC
Confidence 1234689999999999 789999999986 4666555543 22223346789999999999998
No 45
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=4.9e-34 Score=275.32 Aligned_cols=254 Identities=13% Similarity=0.004 Sum_probs=191.2
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCc--CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccC-ceeEEeecc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGT--ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDK-RIAAVQSLS 126 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~-~i~~~~t~g 126 (337)
++.|||+.|.+. ..+++.+.+++.+. ... ...+|++..|..++|+++++|+....+...+++ + +++|+|
T Consensus 37 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~--v~~~~g 109 (429)
T 1yiz_A 37 YKPLNLGQGFPD-----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTE--VLVTVG 109 (429)
T ss_dssp HCCEECCSSSCS-----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTS--EEEESH
T ss_pred CCEEEecCCCCC-----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCC--EEEecC
Confidence 358999999652 23567788877654 221 246798888999999999999843222113344 5 578999
Q ss_pred chhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCC--------CCCCChHHHHHHHHcCCCCeE
Q 047180 127 GTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPG--------TKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~--------~~~~d~~~l~~~l~~~~~~~~ 198 (337)
+++++.+++.++.. +||+|+++.|+|+.|...++..|.+++.+|+..++ ++++|++.+++.+. + +..
T Consensus 110 ~~~a~~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~--~-~~~ 184 (429)
T 1yiz_A 110 AYEALYATIQGHVD--EGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFN--E-KTK 184 (429)
T ss_dssp HHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCC--T-TEE
T ss_pred hHHHHHHHHHHhcC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhc--c-Cce
Confidence 99999999988765 89999999999999999999999999999984321 46799999999885 2 334
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccc
Q 047180 199 FLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ 278 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 278 (337)
++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++.. ...++..+....++++++.||||.||++|+
T Consensus 185 ~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~ 262 (429)
T 1yiz_A 185 MIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPF--EHIRICTLPGMWERTITIGSAGKTFSLTGW 262 (429)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTS--CCCCGGGSTTTGGGEEEEEEHHHHHTCGGG
T ss_pred EEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCC--CCcChhhccCCcCceEEEecchhccCCCCc
Confidence 444479999999999999999999999999999999999999875311 111222221123578999999999999999
Q ss_pred ccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 279 RVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 279 RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|+||+++ ++++++.+.. .......+++.+.|.++..+|++
T Consensus 263 r~G~~~~---~~~~~~~l~~----~~~~~~~~~~~~~~~a~~~~l~~ 302 (429)
T 1yiz_A 263 KIGWAYG---PEALLKNLQM----VHQNCVYTCATPIQEAIAVGFET 302 (429)
T ss_dssp CCEEEES---CHHHHHHHHH----HHHTTTCCCCHHHHHHHHHHHHH
T ss_pred ceEEEEe---CHHHHHHHHH----HHhhcccCCChHHHHHHHHHHhc
Confidence 9999986 4565555543 22222335788899999888876
No 46
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=7.7e-34 Score=272.23 Aligned_cols=262 Identities=14% Similarity=0.082 Sum_probs=194.1
Q ss_pred HHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCce
Q 047180 41 VTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRI 119 (337)
Q Consensus 41 ~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i 119 (337)
...++..+ +++.|+|+.|.+... ....++.+.+++.+ +.. ....|++..|..++|+++++|+....+...++++
T Consensus 29 ~~~~~~~~-g~~~i~l~~~~~~~~--~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~- 103 (406)
T 1xi9_A 29 PARELEKK-GIKVIRLNIGDPVKF--DFQPPEHMKEAYCKAIKE-GHNYYGDSEGLPELRKAIVEREKRKNGVDITPDD- 103 (406)
T ss_dssp CHHHHHHT-TCCCEECCCCCGGGT--TCCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGG-
T ss_pred HHHHHHHc-CCCEEEecCCCCCcC--CCCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHH-
Confidence 34444443 357899999865210 12345677777655 332 2347988889999999999998543222234454
Q ss_pred eEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 120 AAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 120 ~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
+++|+|+++++.+++..+.. |||+|++++|+|+.|...++..|++++.+|+..++++.+|++.+++.+++ +..+
T Consensus 104 -v~~t~g~~~al~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~---~~~~ 177 (406)
T 1xi9_A 104 -VRVTAAVTEALQLIFGALLD--PGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIRKKITD---RTKA 177 (406)
T ss_dssp -EEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHHHHCCT---TEEE
T ss_pred -EEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHHHhhCc---CceE
Confidence 57899999999999988755 89999999999999999999999999999984323567899999998863 3344
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCe-EEEEeccccccccccc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHL-LGLAQSYAKNMGLYGQ 278 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~~~G~ 278 (337)
+++++||||||.+++.+++++|+++|+++|++||+||+|.++.++. ...++..+. .++ ++++.||||.||++|+
T Consensus 178 v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~---~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~ 252 (406)
T 1xi9_A 178 IAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG---EHISPGSLT--KDVPVIVMNGLSKVYFATGW 252 (406)
T ss_dssp EEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS---CCCCHHHHC--SSSCEEEEEESTTTTCCGGG
T ss_pred EEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC---CCCCHHHcC--CCceEEEEeccccccCCCcc
Confidence 4457999999999999999999999999999999999999987531 111233332 456 8999999999999999
Q ss_pred ccceeEeeeCCH----HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 279 RVGCLSVLCEDE----KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 279 RvG~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
|+||+++. .++ ++++++.. ..... .+++.++|.++..+|+
T Consensus 253 r~G~~~~~-~~~~~~~~l~~~l~~----~~~~~-~~~~~~~~~a~~~~l~ 296 (406)
T 1xi9_A 253 RLGYMYFV-DPENKLSEVREAIDR----LARIR-LCPNTPAQFAAIAGLT 296 (406)
T ss_dssp CCEEEEEE-CTTCTTHHHHHHHHH----HHHHT-CCSCSHHHHHHHHHHH
T ss_pred EEEEEEEe-cCchhHHHHHHHHHH----HHHhh-cCCCHHHHHHHHHHHh
Confidence 99999831 244 55555543 22222 4577889999999995
No 47
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-33 Score=272.72 Aligned_cols=255 Identities=15% Similarity=0.173 Sum_probs=192.1
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCc--CCCCCCCCCCCHHHHHHHHHHHhCCCCcc-cccCceeEEeec
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGT--ANMEYLPMGGSVKMVEETLKLAYGDNSEF-IKDKRIAAVQSL 125 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~-~~~~~i~~~~t~ 125 (337)
.++.|||+.|.+. ....+++.+.+++.+. ... ...+|++..|.++||+++++|+..+++.. .++++ +++|+
T Consensus 42 ~~~~idl~~g~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~--v~~t~ 116 (425)
T 1vp4_A 42 DKDAISFGGGVPD---PETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQILKLLERMYGITGLDEDN--LIFTV 116 (425)
T ss_dssp STTCEECCCCSCC---GGGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGG--EEEEE
T ss_pred CCCceeCCCCCCC---cccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHHHHHHhccCCCCCCccc--EEEec
Confidence 4578999999752 1123456777776553 211 13579888899999999999985432211 23444 57899
Q ss_pred cchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC------CCCeEE
Q 047180 126 SGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA------PNGSFF 199 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~~~i 199 (337)
|+++++.+++..+.. |||+|++++|+|+.|...++..|++++.+|+. + .++|++.+++.+++. ++.+++
T Consensus 117 G~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~-~--~~~d~~~l~~~l~~~~~~~~~~~~~~v 191 (425)
T 1vp4_A 117 GSQQALDLIGKLFLD--DESYCVLDDPAYLGAINAFRQYLANFVVVPLE-D--DGMDLNVLERKLSEFDKNGKIKQVKFI 191 (425)
T ss_dssp HHHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEE-T--TEECHHHHHHHHHHHHHTTCGGGEEEE
T ss_pred cHHHHHHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcCCEEEEeccC-C--CCCCHHHHHHHHHhhhhcccCCCceEE
Confidence 999999999988765 89999999999999999999999999999984 3 258999999988641 123455
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQR 279 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 279 (337)
+++|+||||||.+++.+++++|+++|+++|++||+||+|.++.++. ....++..+. ..++++++.||||.|| +|+|
T Consensus 192 ~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~-~~~~~i~~~s~sK~~~-~G~r 267 (425)
T 1vp4_A 192 YVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEG--ETVDPIFKIG-GPERVVLLNTFSKVLA-PGLR 267 (425)
T ss_dssp EEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSS--CCCCCHHHHH-CTTTEEEEEESTTTTC-GGGC
T ss_pred EECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCC--CCCcCHHHhC-CCCCEEEEeccccccc-cccc
Confidence 4679999999999999999999999999999999999999987531 1111233332 2357899999999999 9999
Q ss_pred cceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 280 VGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 280 vG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+||+++ ++++++.+... ......+++.++|.++..+|++
T Consensus 268 ~G~~~~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~ 306 (425)
T 1vp4_A 268 IGMVAG---SKEFIRKIVQA----KQSADLCSPAITHRLAARYLER 306 (425)
T ss_dssp EEEEEC---CHHHHHHHHHH----HHHHHSSCCHHHHHHHHHHHHH
T ss_pred eEEEee---CHHHHHHHHHH----hhhhcCCCCHHHHHHHHHHHhc
Confidence 999986 46666655432 2222235688999999999975
No 48
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.4e-33 Score=269.18 Aligned_cols=275 Identities=16% Similarity=0.123 Sum_probs=199.2
Q ss_pred cccc-cCCCCCCCchhhHHHHHhc--CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHH
Q 047180 25 SWWR-NVEPAAKDPILGVTEAFLA--DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEE 101 (337)
Q Consensus 25 ~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~a 101 (337)
.+|+ ++...+++++..+...+++ ..+++.|+|+.|.+. ...++.+.++++.+.. ...+|++..|..++|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~-----~~~~~~v~~a~~~l~~-~~~~y~~~~g~~~l~~~ 87 (409)
T 2gb3_A 14 DVFSDRVLLTEESPIRKLVPFAEMAKKRGVRIHHLNIGQPD-----LKTPEVFFERIYENKP-EVVYYSHSAGIWELREA 87 (409)
T ss_dssp --CCHHHHSCCCCTTGGGHHHHHHHHHTTCEEEECSSCCCC-----SCCCTHHHHHHHHTCC-SSCCCCCTTCCHHHHHH
T ss_pred HHHHHHhhcCCccHHHHHHHHHHHHHhcCCCEEeccCCCCC-----CCCCHHHHHHHHHHhc-CCCCCCCCCCcHHHHHH
Confidence 3444 3444555555555544332 123568999998752 2345678777733432 24579888899999999
Q ss_pred HHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCC
Q 047180 102 TLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGL 181 (337)
Q Consensus 102 ia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~ 181 (337)
+++|+....+...++++ +++|+||++++.+++..+.. +||+|++++|+|+.|...++..|++++.+|+..++++.+
T Consensus 88 la~~~~~~~g~~~~~~~--v~~~~g~t~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~ 163 (409)
T 2gb3_A 88 FASYYKRRQRVDVKPEN--VLVTNGGSEAILFSFAVIAN--PGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI 163 (409)
T ss_dssp HHHHHHHTSCCCCCGGG--EEEESHHHHHHHHHHHHHCC--TTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHhCCCCCHHH--EEEeCCHHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc
Confidence 99998654333344454 57899999999999988755 899999999999999999999999999998743224444
Q ss_pred ChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCC
Q 047180 182 DFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGH 261 (337)
Q Consensus 182 d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 261 (337)
++.+++.+.+ +..++++++||||||.+++.+++++|+++|+++|++||+||+|.++.++. . ..+. +....+
T Consensus 164 -~~~l~~~l~~---~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~--~-~~~~--~~~~~~ 234 (409)
T 2gb3_A 164 -PQNLESFINE---RTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRG--E-FASA--LSIESD 234 (409)
T ss_dssp -CTTGGGGCCT---TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS--C-CCCG--GGSCCT
T ss_pred -HHHHHHhhCc---CCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCC--C-CCCc--cccCCC
Confidence 7888877642 33444558999999999999999999999999999999999999987531 1 1111 222235
Q ss_pred eEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 262 LLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 262 ~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+++++.||||.||++|+|+||+++ +++++++.+.. ...... +++.++|.++..+|+.
T Consensus 235 ~~i~~~s~sK~~g~~G~r~G~~~~--~~~~l~~~l~~----~~~~~~-~~~~~~~~a~~~~l~~ 291 (409)
T 2gb3_A 235 KVVVIDSVSKKFSACGARVGCLIT--RNEELISHAMK----LAQGRL-APPLLEQIGSVGLLNL 291 (409)
T ss_dssp TEEEEEESTTTTTCGGGCCEEEEC--SCHHHHHHHHH----HHHHSC-CCCHHHHHHHHHHHTC
T ss_pred CEEEEecchhccCCccceEEEEEE--CcHHHHHHHHH----HHhccC-CCCHHHHHHHHHHHhc
Confidence 689999999999999999999986 34355555543 222222 6788999999999975
No 49
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=2.4e-33 Score=266.33 Aligned_cols=254 Identities=12% Similarity=0.102 Sum_probs=192.1
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
..+.|+|+.|.+ ...+++.+.+++.+......++|++ |..++++++++++....+...++++ +++|+|+++
T Consensus 31 ~~~~i~l~~~~~-----~~~~~~~v~~a~~~~~~~~~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~--v~~~~g~~~ 101 (391)
T 4dq6_A 31 TNDLLPMWVADM-----DFKAAPCIIDSLKNRLEQEIYGYTT--RPDSYNESIVNWLYRRHNWKIKSEW--LIYSPGVIP 101 (391)
T ss_dssp CSCSEECCSSSC-----SSCCCHHHHHHHHHHHTTCCCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGG--EEEESCHHH
T ss_pred CCCceeccccCC-----CCCCCHHHHHHHHHHHhCCCCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHH--eEEcCChHH
Confidence 357899999853 2445678888876642223456765 6799999999998543332233454 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec--cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY--HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~--~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
++.+++..+.. +||+|+++.|+|+.|...++..|++++.+|+. .+.++.+|++++++.+++ ..++++++|||
T Consensus 102 a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~v~i~~p~n 175 (391)
T 4dq6_A 102 AISLLINELTK--ANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD----VKLFILCNPHN 175 (391)
T ss_dssp HHHHHHHHHSC--TTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT----EEEEEEESSBT
T ss_pred HHHHHHHHhCC--CCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc----CCEEEEECCCC
Confidence 99999988765 89999999999999999999999999999985 233466899999998863 44455588999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh-cCCeEEEEecccccccccccccceeEee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK-DGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
|||.+++.+++++|+++|+++|+++|+||+|.++.++.. ...++..+.. ..++++++.||||.||++|+|+||+++
T Consensus 176 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~- 252 (391)
T 4dq6_A 176 PVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH--KHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVL- 252 (391)
T ss_dssp TTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEEC-
T ss_pred CCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC--CccCHHHcCccccCcEEEEEechhhccCcccceEEEEe-
Confidence 999999999999999999999999999999999875311 1111222211 125789999999999999999999986
Q ss_pred eCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 287 CEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 287 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+++++.+.+...... ...++++.++|.++..+|.+
T Consensus 253 -~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~ 287 (391)
T 4dq6_A 253 -PDEKDYKLLDDAFTR---IDIKRNNCFSLVATEASYNN 287 (391)
T ss_dssp -CSHHHHHHHHHHHHH---TTCCCCCHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHh---hcCCCCCHHHHHHHHHHHhc
Confidence 455666665543221 22446788899988888874
No 50
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=5.2e-33 Score=266.01 Aligned_cols=253 Identities=17% Similarity=0.200 Sum_probs=190.4
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cC--cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AG--TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
+.|||+.|.+. ....+++.+.+++.+. .. .... |++..|..++|+++++|+....+...++++ +++|+|++
T Consensus 35 ~~idl~~g~~~---~~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la~~~~~~~g~~~~~~~--v~~t~g~t 108 (407)
T 2zc0_A 35 KLISLAAGDPD---PELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELAAFLKKYDHLEVSPEN--IVITIGGT 108 (407)
T ss_dssp CCEECCSCCCC---TTTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHHHHHHHHSCCCCCGGG--EEEESHHH
T ss_pred ceEeCCCCCCC---chhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHHHHHHHhcCCCCCcce--EEEecCHH
Confidence 68999998753 1223556777776553 21 1235 988889999999999998432222133444 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHH----cCCCCeEEEEeCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIK----NAPNGSFFLLHAC 204 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~----~~~~~~~ili~~~ 204 (337)
+++.+++..+.. +||+|+++.|+|+.|...++..|++++.+|+. + .++|++.+++.+. ..++.++++++++
T Consensus 109 ~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~--~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~ 183 (407)
T 2zc0_A 109 GALDLLGRVLID--PGDVVITENPSYINTLLAFEQLGAKIEGVPVD-N--DGMRVDLLEEKIKELKAKGQKVKLIYTIPT 183 (407)
T ss_dssp HHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHTTTCEEEEEEEE-T--TEECHHHHHHHHHHHHHTTCCEEEEEECCS
T ss_pred HHHHHHHHHhcC--CCCEEEEeCCChHHHHHHHHHcCCEEEEcccC-C--CCCCHHHHHHHHHhhhcccCCceEEEECCC
Confidence 999999988765 89999999999999999999999999999984 3 2589999999887 4223345556799
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeE
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
||||||.+++.+++++|+++|+++|++||+||+|.++.++. ....++..+. ..++++++.||||.|+ +|+|+||++
T Consensus 184 ~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~-~~~~~i~~~s~sK~~~-~G~r~G~~~ 259 (407)
T 2zc0_A 184 GQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEG--GDIVPLKALD-NEGRVIVAGTLSKVLG-TGFRIGWII 259 (407)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSC--SSCCCGGGGC-SSCCEEEEEESTTTTC-TTSCCEEEE
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCC--CCCCChhhcC-CCCCEEEEcccccccC-CCcceEEEe
Confidence 99999999999999999999999999999999999987531 1111222221 1247899999999999 999999998
Q ss_pred eeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 285 VLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
+ ++++++++.. .......+++.+.|.++..+|++.
T Consensus 260 ~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~ 294 (407)
T 2zc0_A 260 A---EGEILKKVLM----QKQPIDFCAPAISQYIALEYLKRG 294 (407)
T ss_dssp C---CHHHHHHHHH----HHTTTTSSSCHHHHHHHHHHHHTT
T ss_pred c---CHHHHHHHHH----HHHhhcCCCCHHHHHHHHHHHHcC
Confidence 6 4666555543 222222346889999999999864
No 51
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.1e-33 Score=267.70 Aligned_cols=250 Identities=10% Similarity=0.047 Sum_probs=191.1
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
+.+.|||+.|.+ ...+++.+.+++.+......++|++ .| .++|+++++++.+.++...++++ +++|+|+++
T Consensus 22 g~~~idl~~~~~-----~~~~~~~v~~a~~~~~~~~~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~--i~~t~g~~~ 92 (377)
T 3fdb_A 22 GQGVLPLWVAES-----DFSTCPAVLQAITDAVQREAFGYQP-DG-SLLSQATAEFYADRYGYQARPEW--IFPIPDVVR 92 (377)
T ss_dssp CTTSEECCSSCC-----CSCCCHHHHHHHHHHHHTTCCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGG--EEEESCHHH
T ss_pred CCCeeeecccCC-----CCCCCHHHHHHHHHHHHcCCCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHH--EEEeCChHH
Confidence 357899999853 2345677888776541223567988 88 89999999998543333234555 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++..+.. |||+|+++.|+|+.|...++..|++++.+|+. . + +|++++++.+.+ ..++++ +++|||||
T Consensus 93 a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~-~--~d~~~l~~~l~~--~~~~v~-i~~p~npt 163 (377)
T 3fdb_A 93 GLYIAIDHFTP--AQSKVIVPTPAYPPFFHLLSATQREGIFIDAT-G-G--INLHDVEKGFQA--GARSIL-LCNPYNPL 163 (377)
T ss_dssp HHHHHHHHHSC--TTCCEEEEESCCTHHHHHHHHHTCCEEEEECT-T-S--CCHHHHHHHHHT--TCCEEE-EESSBTTT
T ss_pred HHHHHHHHhcC--CCCEEEEcCCCcHhHHHHHHHcCCEEEEccCC-C-C--CCHHHHHHHhcc--CCCEEE-EeCCCCCC
Confidence 99999988766 89999999999999999999999999999973 2 2 999999999974 234444 47899999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|+++|+++|+++|+||+|.++.++. .....++..+.. .++++++.||||.||++|+|+||+++ ++
T Consensus 164 G~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~-~~~~i~~~s~sK~~g~~G~r~G~~~~--~~ 239 (377)
T 3fdb_A 164 GMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDG-QHTVAAGVSDTA-ASVCITITAPSKAWNIAGLKCAQIIF--SN 239 (377)
T ss_dssp TBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSS-CCCCGGGSCHHH-HHHEEEEECSTTTTTCGGGCCEEEEC--CS
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCC-CCCcccHHHccC-CCcEEEEEeChHhccCcchhheEEEe--CC
Confidence 999999999999999999999999999999987642 011112222222 35789999999999999999999876 46
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+++++.+.. .......+++.++|.++..+|++
T Consensus 240 ~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~ 271 (377)
T 3fdb_A 240 PSDAEHWQQ----LSPVIKDGASTLGLIAAEAAYRY 271 (377)
T ss_dssp HHHHHHHHH----SCHHHHCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHH----HHHhhcCCCCHHHHHHHHHHHhc
Confidence 666555543 22223346788999998888875
No 52
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=4.3e-33 Score=265.91 Aligned_cols=255 Identities=10% Similarity=0.025 Sum_probs=189.3
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.+.+||+.|.+ ...+++.+.+++.+.......+|++. ..++|+++++|+....+...++++ +++|+|++++
T Consensus 31 ~~~i~l~~~~~-----~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~--v~~t~g~~~a 101 (399)
T 1c7n_A 31 NEVVPLSVADM-----EFKNPPELIEGLKKYLDETVLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDW--IINTAGVVPA 101 (399)
T ss_dssp TTCCCCCSSSC-----SSCCCHHHHHHHHHHHHHCCCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGG--EEEESSHHHH
T ss_pred CCceeeeecCC-----CCCCCHHHHHHHHHHHhcCCCCCCCC--cHHHHHHHHHHHHHHhCCCCChhh--EEEcCCHHHH
Confidence 46899998853 13456778887765411234678764 899999999998432221133444 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCC-CCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPG-TKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
+.+++..+.. |||+|+++.|+|+.|...++..|++++.+|+..++ ++.+|++.+++.+++ ++.++++ +++|||||
T Consensus 102 ~~~~~~~l~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~-~~~~~v~-~~~~~npt 177 (399)
T 1c7n_A 102 VFNAVREFTK--PGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKD-KNNKALL-FCSPHNPV 177 (399)
T ss_dssp HHHHHHHHCC--TTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTC-TTEEEEE-EESSBTTT
T ss_pred HHHHHHHhcC--CCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhcc-CCCcEEE-EcCCCCCC
Confidence 9999988765 89999999999999999999999999999874222 355899999998863 2334444 58999999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh-cCCeEEEEecccccccccccccceeEeeeC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK-DGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
|.+++.+++++|+++|++++++||+||+|.++.++.. ...++..+.. ..++++++.||||.||++|+|+||+++ +
T Consensus 178 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~--~ 253 (399)
T 1c7n_A 178 GRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY--EHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIII--K 253 (399)
T ss_dssp TBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEEC--C
T ss_pred CcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CcccHHHcCccccCcEEEEEeChhhccccchheEEEEE--C
Confidence 9999999999999999999999999999999875311 1111222211 125789999999999999999999986 4
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++...... ..+++++.++|.++..+|++
T Consensus 254 ~~~~~~~l~~~~~~---~~~~~~~~~~~~a~~~~l~~ 287 (399)
T 1c7n_A 254 NPDIRERFTKSRDA---TSGMPFTTLGYKACEICYKE 287 (399)
T ss_dssp CHHHHHHHHHHHHH---TTCCCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhh---cccCCCCHHHHHHHHHHHhC
Confidence 56666665442211 12345788999998888874
No 53
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=9.8e-33 Score=260.37 Aligned_cols=249 Identities=12% Similarity=0.089 Sum_probs=190.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
++.|+|+.|.+. ..+++.+.+++.+... ...+|++..| .+||+++++++ + .++++ +++|+|++++
T Consensus 30 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~-~~~~y~~~~~-~~lr~~la~~~-~-----~~~~~--v~~~~g~~~a 94 (365)
T 3get_A 30 KEVIKLASNENP-----FGTPPKAIECLRQNAN-KAHLYPDDSM-IELKSTLAQKY-K-----VQNEN--IIIGAGSDQV 94 (365)
T ss_dssp SCCEECSSCCCT-----TCSCHHHHHHHHHHGG-GTTSCCCTTC-HHHHHHHHHHH-T-----CCGGG--EEEESSHHHH
T ss_pred CceEEecCCCCC-----CCCCHHHHHHHHHHHH-hhccCCCCCh-HHHHHHHHHHh-C-----CCcce--EEECCCHHHH
Confidence 578999998642 3466788887766422 3567877766 89999999987 3 22344 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+.+ +||+|+++.|+|+.|...++..|++++.+|+ +.+++ +|++++++.+. ++.++++ +++||||||
T Consensus 95 ~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~--~~~~~v~-~~~p~nptG 167 (365)
T 3get_A 95 IEFAIHSKLN--SKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHK--DEIKLIF-LCLPNNPLG 167 (365)
T ss_dssp HHHHHHHHCC--TTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTT--TTEEEEE-EESSCTTTC
T ss_pred HHHHHHHHhC--CCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhC--CCCCEEE-EcCCCCCCC
Confidence 9999888765 8999999999999999999999999999987 33467 99999999886 2334444 489999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCC--CCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFAS--GDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
.+++.+++++|+++| ++|+++|+||+|.++.+ .+. ....... .....+++++++||||.||++|+|+||+++
T Consensus 168 ~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~-~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~--- 241 (365)
T 3get_A 168 ECLDASEATEFIKGV-NEDCLVVIDAAYNEFASFKDSK-KHLEPCE-LIKEFDNVLYLGTFSKLYGLGGLRIGYGIA--- 241 (365)
T ss_dssp CCCCHHHHHHHHHTS-CTTSEEEEECTTHHHHHHHCGG-GCCCHHH-HHHHCTTEEEEEESSSTTSCTTTCCEEEEE---
T ss_pred CCcCHHHHHHHHHhC-CCCcEEEEeCccHHHhcccCCc-ccccHhH-HhccCCCEEEEeecchHhcCcchheEEEEc---
Confidence 999999999999999 67999999999998862 211 1111122 223346889999999999999999999986
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
++++++++.. .. ..+ +++.++|.++..+|++.+..++.+
T Consensus 242 ~~~~~~~~~~----~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~ 280 (365)
T 3get_A 242 NANIISAFYK----LR-APF-NVSNLALKAAVAAMDDDEFTEKTL 280 (365)
T ss_dssp CHHHHHHHHH----HS-CTT-CSCHHHHHHHHHHHTCHHHHHHHH
T ss_pred CHHHHHHHHH----hc-CCC-CcCHHHHHHHHHHhCCHHHHHHHH
Confidence 5666555543 22 234 478999999999999865444433
No 54
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=7.6e-33 Score=261.76 Aligned_cols=257 Identities=11% Similarity=0.091 Sum_probs=189.1
Q ss_pred CCCchhhHHHHHhcC--CCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCC
Q 047180 34 AKDPILGVTEAFLAD--PSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDN 110 (337)
Q Consensus 34 ~~~~~~~~~~~~~~~--~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~ 110 (337)
+.+.+.++....++. .+++.|+|+.|.+. +.+++.+.+++.+. .. ...+|++..|..++|+++++|+...+
T Consensus 10 ~~~~~~~~~~~~~~~~~~g~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~y~~~~~~~~l~~~la~~~~~~~ 83 (370)
T 2z61_A 10 ESFEVMDILALAQKLESEGKKVIHLEIGEPD-----FNTPKPIVDEGIKSLKE-GKTHYTDSRGILELREKISELYKDKY 83 (370)
T ss_dssp CCCTTHHHHHHHHHHHHTTCCCEECCCCSCS-----SCCCHHHHHHHHHHHHT-TCCSCCCTTCCHHHHHHHHHHHHHHS
T ss_pred cccHHHHHHHHHHHHHhcCCCEEEccCCCCC-----CCCCHHHHHHHHHHHHc-CccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 334454444333221 23568999998652 23457777776553 32 24679888899999999999985433
Q ss_pred CcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHH
Q 047180 111 SEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDI 190 (337)
Q Consensus 111 ~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l 190 (337)
+...++++ +++|+|+++++.+++..+.. |||+|++++|+|+.|...++..|++++.+| +|++++++.+
T Consensus 84 g~~~~~~~--v~~~~g~~~a~~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~~l 151 (370)
T 2z61_A 84 KADIIPDN--IIITGGSSLGLFFALSSIID--DGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEEAL 151 (370)
T ss_dssp SCCCCGGG--EEEESSHHHHHHHHHHHHCC--TTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHHHC
T ss_pred CCCCChhh--EEECCChHHHHHHHHHHhcC--CCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHHhc
Confidence 32244555 57899999999999988765 899999999999999999999999998876 6889999888
Q ss_pred HcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccc
Q 047180 191 KNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYA 270 (337)
Q Consensus 191 ~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 270 (337)
.+ +..++++++||||||.+++.+ |+++|+++|++||+||+|.++.++. ...++..+....++++++.|||
T Consensus 152 ~~---~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g---~~~~~~~~~~~~~~~i~~~s~s 221 (370)
T 2z61_A 152 SD---KTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEG---KCYSAIEFDENLEKTILINGFS 221 (370)
T ss_dssp CS---SEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSS---CCCCGGGTCTTCSSEEEEEEST
T ss_pred cc---CceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCC---CCcCHHHccCCCCcEEEEecCh
Confidence 53 334444589999999999988 9999999999999999999987531 1111222222235789999999
Q ss_pred ccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 271 KNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 271 K~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|.||++|+|+||+++ ++++++.+.. .......+++.++|.++..+|+.
T Consensus 222 K~~~~~G~r~G~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~ 269 (370)
T 2z61_A 222 KLYAMTGWRIGYVIS---NDEIIEAILK----LQQNLFISAPTISQYAALKAFEK 269 (370)
T ss_dssp TTTTCGGGCCEEEEC---CHHHHHHHHH----HHHHHTSSSCHHHHHHHGGGGSH
T ss_pred hccCCccceEEEEEE---CHHHHHHHHH----HHhhcccCCCHHHHHHHHHHHhc
Confidence 999999999999986 4565555543 22222346788999999999975
No 55
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=6.5e-33 Score=261.71 Aligned_cols=238 Identities=17% Similarity=0.168 Sum_probs=181.4
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGAC 131 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al 131 (337)
+.|||+.|++. ..+++.+ .+ .....|++. +..++|+++|+++ + .++++ +++|+|+++++
T Consensus 30 ~~i~l~~~~~~-----~~~~~~v-----a~--~~~~~Y~~~-~~~~lr~~la~~~-~-----~~~~~--v~~~~G~~~ai 88 (356)
T 1fg7_A 30 GDVWLNANEYP-----TAVEFQL-----TQ--QTLNRYPEC-QPKAVIENYAQYA-G-----VKPEQ--VLVSRGADEGI 88 (356)
T ss_dssp CSEECSSCCCS-----SCCCCCC-----CC--CCTTSCCCS-SCHHHHHHHHHHH-T-----SCGGG--EEEESHHHHHH
T ss_pred ceEEeeCCCCC-----CCCCHhH-----hh--hhhccCCCc-cHHHHHHHHHHHh-C-----CChHH--EEEcCCHHHHH
Confidence 57999998642 1223334 22 235678765 6899999999998 2 22344 57899999999
Q ss_pred HHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 132 RLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 132 ~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
.+++..+.. || |+|++++|+|+.|...++..|++++.+|+. +++++|++++++.+. +.++++ +|+||||||
T Consensus 89 ~~~~~~~~~--~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~---~~~~v~-l~~p~nptG 160 (356)
T 1fg7_A 89 ELLIRAFCE--PGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD---GVKVVY-VCSPNNPTG 160 (356)
T ss_dssp HHHHHHHCC--TTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT---TEEEEE-EESSCTTTC
T ss_pred HHHHHHHhC--CCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc---CCCEEE-EeCCCCCCC
Confidence 999988765 89 999999999999999999999999999874 257899999987764 234444 489999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|+++|+ ++++||+||+|.++..+ . +...+....+++++++||||.||++|+|+||+++ ++
T Consensus 161 ~~~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~---~---~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~---~~ 230 (356)
T 1fg7_A 161 QLINPQDFRTLLELTR-GKAIVVADEAYIEFCPQ---A---SLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLA---NE 230 (356)
T ss_dssp CCCCHHHHHHHHHHHT-TTCEEEEECTTGGGSGG---G---CSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEE---CH
T ss_pred CCCCHHHHHHHHHhCC-CCCEEEEEccchhhcCC---C---cHHHHHhhCCCEEEEecchHhhcCchhhhEEEEe---CH
Confidence 9999999999999999 99999999999988521 1 1112223345789999999999999999999986 56
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHH--HHHHHh
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAEL--KKLWLK 334 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~--~~~w~~ 334 (337)
++++.+.. . ...| +++.++|.++..+|++.++ .+++++
T Consensus 231 ~~~~~l~~----~-~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~ 270 (356)
T 1fg7_A 231 EVINLLMK----V-IAPY-PLSTPVADIAAQALSPQGIVAMRERVA 270 (356)
T ss_dssp HHHHHHHH----H-SCSS-CSCHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred HHHHHHHH----h-cCCC-CCCHHHHHHHHHHhcCccHHHHHHHHH
Confidence 65555443 2 2344 5788999999999997654 444443
No 56
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=9.3e-33 Score=259.24 Aligned_cols=253 Identities=12% Similarity=0.125 Sum_probs=193.7
Q ss_pred CCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 49 PSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 49 ~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
.....|||+.|.+. ..+++.+.+++.+... ....| |..|.++||+++++++ + .++++ +++|+|++
T Consensus 14 ~~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~-~~~~y-~~~~~~~l~~~la~~~-~-----~~~~~--i~~~~g~~ 78 (354)
T 3ly1_A 14 STDNPIRINFNENP-----LGMSPKAQAAARDAVV-KANRY-AKNEILMLGNKLAAHH-Q-----VEAPS--ILLTAGSS 78 (354)
T ss_dssp CSSSCEECSSCCCS-----SCCCHHHHHHHHHTGG-GTTSC-CHHHHHHHHHHHHHHT-T-----SCGGG--EEEESHHH
T ss_pred CCCceEEccCCCCC-----CCCCHHHHHHHHHHHh-hCcCC-CCCchHHHHHHHHHHh-C-----CChHH--EEEeCChH
Confidence 34578999998632 3466788888766422 24667 4568899999999987 3 22344 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.. +||+|+++.|+|+.|...++..|++++.+|+. + ++++|++.+++.+.+.++.+++++ ++||||
T Consensus 79 ~a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~-~~~~d~~~l~~~l~~~~~~~~v~l-~~p~np 153 (354)
T 3ly1_A 79 EGIRAAIEAYAS--LEAQLVIPELTYGDGEHFAKIAGMKVTKVKML-D-NWAFDIEGLKAAVAAYSGPSIVYL-VNPNNP 153 (354)
T ss_dssp HHHHHHHHHHCC--TTCEEEEESSSCTHHHHHHHHTTCEEEEECCC-T-TSCCCHHHHHHHHHTCSSCEEEEE-ESSCTT
T ss_pred HHHHHHHHHHhC--CCCeEEECCCCchHHHHHHHHcCCEEEEecCC-C-CCCCCHHHHHHHhccCCCCCEEEE-eCCCCC
Confidence 999999988765 89999999999999999999999999999873 2 589999999999974233445555 799999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcC-CeEEEEecccccccccccccceeEeee
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDG-HLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
||.+++.+++++|+++| ++|+++|+||+|.++.++.. ...... +.... ++++++.||||.||++|+|+||+++
T Consensus 154 tG~~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~--~~~~~~-~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-- 227 (354)
T 3ly1_A 154 TGTITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPR--FRSISP-MITQGAENIILLKTFSKIHAMAGMRVGYAVA-- 227 (354)
T ss_dssp TCCCCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTT--CCCSHH-HHHTTCSSEEEEEESSSTTCCGGGCCEEEEC--
T ss_pred cCCCcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccc--cCCHHH-HhhhcCCCEEEEeeChhhccChhhhheeeec--
Confidence 99999999999999999 89999999999999875321 111122 22333 6889999999999999999999985
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
+++++++ +...... .+++.++|.++..+|++.+..++.++
T Consensus 228 -~~~~~~~----~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~ 267 (354)
T 3ly1_A 228 -HPTVIAL----MGRYVAG--EKINFSGVDAALASMNDSAFITYSKK 267 (354)
T ss_dssp -CHHHHHH----HGGGTTC--SCCCHHHHHHHHHHTTCHHHHHHHHH
T ss_pred -CHHHHHH----HHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHH
Confidence 5555444 4433332 46889999999999998654444433
No 57
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=9.4e-33 Score=261.49 Aligned_cols=255 Identities=11% Similarity=0.071 Sum_probs=192.4
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
+.+.|||+.|.+ ...+++.+.+++.+.......+|++. ..++++++++++....+...++++ +++|+|+++
T Consensus 23 ~~~~i~l~~~~~-----~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~--v~~~~g~~~ 93 (383)
T 3kax_A 23 NEELIHAWIADM-----DFEVPQPIQTALKKRIEHPIFGYTLP--PENIGDIICNWTKKQYNWDIQKEW--IVFSAGIVP 93 (383)
T ss_dssp SSCCEECCCSSC-----SSCCCHHHHHHHHHHHHSCCCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGG--EEEESCHHH
T ss_pred CCCeeecccccC-----CCCCCHHHHHHHHHHHhcCCCCCCCC--CHHHHHHHHHHHHHHhCCCCChhh--EEEcCCHHH
Confidence 457899999853 24466788887765412234678765 678999999998543322233454 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccC-CCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHP-GTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~-~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
++.+++..+.+ +||+|+++.|+|+.|...++..|++++.+|+... .++.+|++.+++.+. ++.+++++ ++||||
T Consensus 94 a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~--~~~~~v~i-~~p~np 168 (383)
T 3kax_A 94 ALSTSIQAFTK--ENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQ--QGVKLMLL-CSPHNP 168 (383)
T ss_dssp HHHHHHHHHCC--TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHT--TTCCEEEE-ESSBTT
T ss_pred HHHHHHHHhCC--CCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhC--cCCeEEEE-eCCCCC
Confidence 99999888765 8999999999999999999999999999987432 235689999999984 23445555 889999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEecccccccccccccceeEeee
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
||.+++.+++++|+++|+++|+++|+||+|.++.++.. ...++..+... .++++++.||||.||++|+|+||+++
T Consensus 169 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-- 244 (383)
T 3kax_A 169 IGRVWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADH--THTPFASLSEELAARTITCMAPSKTFNIAGLQASIIII-- 244 (383)
T ss_dssp TTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEEC--
T ss_pred CCcCcCHHHHHHHHHHHHHCCCEEEEEccccccccCCC--CceeHhhcCccccCcEEEEEEChhhccCcchhheEEEe--
Confidence 99999999999999999999999999999999875311 11112222211 25789999999999999999999976
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+++++++.+...... ..+++++.++|.++..+|++
T Consensus 245 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~ 279 (383)
T 3kax_A 245 PNEKLRQAFTSIQYR---QGFHGLNIFAYTAMQSAYTE 279 (383)
T ss_dssp CCHHHHHHHHHHHHH---TTCCCCCHHHHHHHHHHTTT
T ss_pred CCHHHHHHHHHHHhh---cccCCCCHHHHHHHHHHHHh
Confidence 467766665542221 22346788999999999986
No 58
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.5e-32 Score=262.27 Aligned_cols=251 Identities=17% Similarity=0.182 Sum_probs=190.8
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cC--cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AG--TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
.++.|||+.|.+. ....+++.+.+++.+. .. ....+|++..|..+||+++++|+ + .++++ +++|+|
T Consensus 31 ~~~~i~l~~g~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~~~-g-----~~~~~--v~~~~g 99 (397)
T 2zyj_A 31 RPGILSFAGGLPA---PELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAEWI-G-----VRPEE--VLITTG 99 (397)
T ss_dssp STTCEEESSCCCC---GGGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHHHH-T-----SCGGG--EEEESH
T ss_pred CCCceecCCCCCC---chhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHHHh-C-----CChhh--EEEecc
Confidence 3568999998652 1123456777776553 21 12357988889999999999998 3 22344 578999
Q ss_pred chhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCC
Q 047180 127 GTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAH 206 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~ 206 (337)
+++++.+++..+.. +||+|+++.|+|+.|...++..|++++.+|+. + .++|++.+++.+++. +.++++++++||
T Consensus 100 ~~~al~~~~~~~~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~--~~~d~~~l~~~l~~~-~~~~v~~~~~~~ 173 (397)
T 2zyj_A 100 SQQALDLVGKVFLD--EGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAG-E--EGPDLDALEEVLKRE-RPRFLYLIPSFQ 173 (397)
T ss_dssp HHHHHHHHHHHHCC--TTCEEEEEESCCHHHHHHHHTTCCEEEEEEEE-T--TEECHHHHHHHHHHC-CCSCEEECCBSC
T ss_pred HHHHHHHHHHHhCC--CCCEEEEeCCCcHHHHHHHHHcCCEEEecCcC-C--CCCCHHHHHHHHhhc-CCeEEEECCCCc
Confidence 99999999888765 89999999999999999999999999999984 3 358999999988752 234555569999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc--CCeEEEEecccccccccccccceeE
Q 047180 207 NPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD--GHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 207 NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
||||.+++.+++++|+++|+++|++||+||+|.++.++. ....++..+... .++++++.||||.|| +|+|+||++
T Consensus 174 nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~G~r~G~~~ 250 (397)
T 2zyj_A 174 NPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGE--ARLPSLFELAREAGYPGVIYLGSFSKVLS-PGLRVAFAV 250 (397)
T ss_dssp TTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSS--CCCCCHHHHHHHHTCCCEEEEEESTTTTC-GGGCCEEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCC--CCCCchhhhCcccCCCeEEEEeccccccc-ccceeEEEe
Confidence 999999999999999999999999999999999987531 111122333222 157899999999999 999999998
Q ss_pred eeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 285 VLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
+ ++++++.+... ......+++.++|.++..+|++.+
T Consensus 251 ~---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~~l~~~~ 286 (397)
T 2zyj_A 251 A---HPEALQKLVQA----KQGADLHTPMLNQMLVHELLKEGF 286 (397)
T ss_dssp C---CHHHHHHHHHH----HHHHHSSCCHHHHHHHHHHHTTTH
T ss_pred c---CHHHHHHHHHH----HHhhcCCCCHHHHHHHHHHHHhCC
Confidence 6 46665555432 222223468899999999999753
No 59
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1e-33 Score=271.60 Aligned_cols=270 Identities=16% Similarity=0.148 Sum_probs=182.4
Q ss_pred CCchhhHHHHHhc-CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-c-C---cCCCCCCCCCCCHHHHHHHHHHHhC
Q 047180 35 KDPILGVTEAFLA-DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-A-G---TANMEYLPMGGSVKMVEETLKLAYG 108 (337)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~-~---~~~~~Y~~~~G~~~lr~aia~~~~~ 108 (337)
++.+..++.++.+ ..++++|+|+.|.+. ..+.+.+.+.++++++ . . ....+|++..|.++||+++++|+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~ 90 (417)
T 3g7q_A 14 HSGITRLMEDLNDGLRTPGAIMLGGGNPA---HIPAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLLRE 90 (417)
T ss_dssp --CHHHHHHHHHC-----CCEECSCCCCC---CCHHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhhccCCCceEecCcCCC---CCChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHHHH
Confidence 3445555555443 345789999999653 2233345677776654 1 1 1224799999999999999999854
Q ss_pred CCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCC-----eEEEc-CCCCcchHHHHHhc------CceeeEeeeccC
Q 047180 109 DNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDS-----QIYIP-VPTWSNHHNIWRDA------HVTQRTFHYYHP 176 (337)
Q Consensus 109 ~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd-----~Vlv~-~P~y~~y~~~~~~~------G~~~~~~~~~~~ 176 (337)
+++...++++ +++|+|+++++.+++.++.. +|| +|+++ +|+|+.|...+... +..++.++. +.
T Consensus 91 ~~g~~~~~~~--i~~t~G~t~al~~~~~~l~~--~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 165 (417)
T 3g7q_A 91 TLGWDIEPQN--IALTNGSQSAFFYLFNLFAG--RRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPE-GQ 165 (417)
T ss_dssp HHCCCCCGGG--EEEESCHHHHHHHHHHHHSB--C----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGG-GE
T ss_pred HhCCCCCccc--EEEeCCcHHHHHHHHHHHcC--CCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCC-cc
Confidence 3333345565 57899999999999988876 877 89997 99999998765422 223333332 11
Q ss_pred CCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHh
Q 047180 177 GTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIF 256 (337)
Q Consensus 177 ~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 256 (337)
.++.+|++.++ +. .++.++++++||||||.+++.+++++|+++|++||++||+||+|.++..+....+ ..
T Consensus 166 ~~~~~d~~~l~--~~---~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~~~~~~---~~-- 235 (417)
T 3g7q_A 166 FKYHVDFEHLH--IG---EETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPGIIFSE---AR-- 235 (417)
T ss_dssp EEEECCGGGCC--CC---TTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTCCBCSC---CC--
T ss_pred cccccCHHHhc--cc---cCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccccccccc---cc--
Confidence 13678998887 32 3455566689999999999999999999999999999999999986532100000 00
Q ss_pred hhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHH
Q 047180 257 LKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKK 330 (337)
Q Consensus 257 ~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~ 330 (337)
....++++++.|||| ++++|+|+||+++ ++++++++.. .......+++.++|.++..+|++.++.+
T Consensus 236 ~~~~~~~i~~~s~sK-~~~~G~r~G~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 301 (417)
T 3g7q_A 236 PLWNPNIILCMSLSK-LGLPGSRCGIIIA---NDKTITAIAN----MNGIISLAPGGMGPAMMCEMIKRNDLLR 301 (417)
T ss_dssp CCCCTTEEEEEESGG-GTCTTSCCEEEEC---CHHHHHHHHH----HHHHHCCCCCSHHHHHHHHHHHTTCHHH
T ss_pred cCCCCCEEEEEechh-ccCCCcceEEEEe---CHHHHHHHHH----hhcceeeCCCcHHHHHHHHHHcCcchHH
Confidence 112357999999999 7999999999875 5666555543 2233334578899999999998765433
No 60
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=6.5e-33 Score=267.00 Aligned_cols=254 Identities=13% Similarity=0.046 Sum_probs=188.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHH--Hh-c-CcCCCCC-CCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeec
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAER--RI-A-GTANMEY-LPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSL 125 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~--~~-~-~~~~~~Y-~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~ 125 (337)
...|||+.|.+.. ...+.++.+.+++. ++ . .....+| ++..|.++||+++++|+ + .++++ +++|+
T Consensus 25 ~~~i~l~~g~p~~--~~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~-~-----~~~~~--i~~t~ 94 (423)
T 3ez1_A 25 GLNLNMQRGQPAD--ADFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL-D-----VKAEN--VLVWN 94 (423)
T ss_dssp TCCEESCCCCCCH--HHHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT-T-----SCGGG--EEECS
T ss_pred CceEecCCCCCCh--HhCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh-C-----CChhh--EEEeC
Confidence 4689999997531 00234446777653 33 2 2234789 88899999999999997 2 23444 57899
Q ss_pred cchhHHH--HHHHHHhhhCC---------CCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC
Q 047180 126 SGTGACR--LFADFQKRFHP---------DSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP 194 (337)
Q Consensus 126 g~~~al~--~~~~~l~~~~p---------gd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 194 (337)
|+++++. +++..+....| ||+|++++|+|+.|...++..|++++.+|+.+ .++|++.+++++.+.+
T Consensus 95 G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~---~g~d~~~l~~~l~~~~ 171 (423)
T 3ez1_A 95 NSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQS---DGPDVDAVERLAGTDP 171 (423)
T ss_dssp SCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEET---TEECHHHHHHHHHSCT
T ss_pred CcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCC---CCCCHHHHHHHHhhCC
Confidence 9999997 77766543114 69999999999999999999999999999843 3699999999986333
Q ss_pred CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH-HhcCceeEEcccCCCCCCCC-CccchHHHHHh---hhcCCeEEEEecc
Q 047180 195 NGSFFLLHACAHNPTGVDPSEEQWKEISYQI-KAKGHFPFFDMAYQGFASGD-PERDAKAIRIF---LKDGHLLGLAQSY 269 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~-~~~~~~ii~De~Y~~~~~~~-~~~~~~~~~~~---~~~~~~~i~~~S~ 269 (337)
+.++++++|+||||||.+++.+++++|+++| +++|++||+||+|.++.+.+ ......++..+ ....+++++++||
T Consensus 172 ~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 251 (423)
T 3ez1_A 172 SVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFAST 251 (423)
T ss_dssp TEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEES
T ss_pred CceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCc
Confidence 4456667789999999999999999999999 99999999999999654321 00111112212 1234689999999
Q ss_pred cccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 270 AKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 270 SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
||. +++|+|+||+++ ++++++.+.. .......+++.+.|.++..+|++
T Consensus 252 sK~-~~~G~r~G~~~~---~~~~~~~~~~----~~~~~~~~~~~~~~~a~~~~l~~ 299 (423)
T 3ez1_A 252 SKI-TFAGAGLGFVAS---SEDNIRWLSK----YLGAQSIGPNKVEQARHVKFLTE 299 (423)
T ss_dssp TTT-SCSSSSCEEEEE---CHHHHHHHHH----HHHHSCSCCCHHHHHHHHHHHHH
T ss_pred hhh-ccCCcceEEEEe---CHHHHHHHHH----HHhhhccCCCHHHHHHHHHHHHh
Confidence 999 679999999986 4555555443 33333456889999999999987
No 61
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=1.9e-32 Score=260.05 Aligned_cols=255 Identities=12% Similarity=0.089 Sum_probs=192.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
.+.|||+.|.+ ...+++.+.+++.+......++|++. ..++++++++++....+...++++ +++|+|++++
T Consensus 27 ~~~i~~~~~~~-----~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~--i~~~~g~~~a 97 (391)
T 3dzz_A 27 EKELPMWIAEM-----DFKIAPEIMASMEEKLKVAAFGYESV--PAEYYKAVADWEEIEHRARPKEDW--CVFASGVVPA 97 (391)
T ss_dssp TTCEECCSSCC-----SSCCCHHHHHHHHHHHTTCCCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGG--EEEESCHHHH
T ss_pred CCceeccccCC-----CCCCCHHHHHHHHHHHhcCcCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHH--EEECCCHHHH
Confidence 47899999853 24467788887766422235678765 689999999998544332234454 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec-cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY-HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
+.+++..+.. +||+|+++.|+|+.|...++..|++++.+|+. ...++.+|++.+++++++ + +..++++++|||||
T Consensus 98 ~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~-~~~~v~i~~p~npt 173 (391)
T 3dzz_A 98 ISAMVRQFTS--PGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLAT-P-SVRMMVFCNPHNPI 173 (391)
T ss_dssp HHHHHHHHSC--TTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTS-T-TEEEEEEESSBTTT
T ss_pred HHHHHHHhCC--CCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhc-c-CceEEEEECCCCCC
Confidence 9999988765 89999999999999999999999999999874 233456999999999863 2 33444458899999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEecccccccccccccceeEeeeC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
|.+++.+++++|+++|+++|+++|+||+|.++.++.. ...++..+... .++++++.||||.||++|+|+||+++ +
T Consensus 174 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~--~ 249 (391)
T 3dzz_A 174 GYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDE--DITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAII--P 249 (391)
T ss_dssp TBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC--CCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEEC--C
T ss_pred CcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCC--CceehhhcCccccCcEEEEEeChhhccccchhheEEEE--C
Confidence 9999999999999999999999999999999875311 11122222211 35799999999999999999999986 4
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++.+...... ....+++.++|.++..+|++
T Consensus 250 ~~~~~~~~~~~~~~---~~~~~~~~~~~~a~~~~l~~ 283 (391)
T 3dzz_A 250 NPDLRARAEESFFL---AGIGEPNLLAIPAAIAAYEE 283 (391)
T ss_dssp SHHHHHHHHHHHHH---HTCSSCCTTHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh---hccCCCCHHHHHHHHHHHhc
Confidence 67776666543221 12335778889888888874
No 62
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=6.9e-33 Score=265.23 Aligned_cols=250 Identities=17% Similarity=0.153 Sum_probs=178.4
Q ss_pred CCCCCeeEeeeeeeecCCCCcccchHHHHHHHHh-c----CcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 48 DPSPDKVNVGVGAYRDDNGKPVVLECVREAERRI-A----GTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 48 ~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~----~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
+.+++.|+|+.|.+. .++++.+.+++.+. . ....++|++..|.++||+++++|+. . +. .++++ ++
T Consensus 30 ~~~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~-~-g~-~~~~~--v~ 99 (400)
T 3asa_A 30 NPQHTVINLSIGDTT-----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY-R-GF-VDAKE--IF 99 (400)
T ss_dssp CTTSCCEECSSCCCC-----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS-T-TS-SCGGG--EE
T ss_pred cCCCceEeccCCCCC-----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH-c-CC-CCHHH--EE
Confidence 345678999999642 33556676666542 1 1134679888899999999999974 2 21 23454 57
Q ss_pred eeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCce-eeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEE
Q 047180 123 QSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVT-QRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLL 201 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~-~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili 201 (337)
+|+|+++++.+++.++ . |||+|++++|+|+.|...++..|.+ ++.+|+.+.+++..|+++ . ++.+++++
T Consensus 100 ~~~G~~~al~~~~~~~-~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~----~---~~~~~v~l 169 (400)
T 3asa_A 100 ISDGAKVDLFRLLSFF-G--PNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE----D---THIDILCL 169 (400)
T ss_dssp EESCHHHHHHHHHHHH-C--SSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT----T---CCCSEEEE
T ss_pred EccChHHHHHHHHHHc-C--CCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh----c---cCccEEEE
Confidence 8999999999876554 3 8999999999999999999999999 999987432234444332 1 23345555
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccc
Q 047180 202 HACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVG 281 (337)
Q Consensus 202 ~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 281 (337)
++||||||.+++.+++++|+++|+++|++||+||+|.+|.++.. ...++..+....++++++.||||.||++|+|+|
T Consensus 170 -~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~g~~GlriG 246 (400)
T 3asa_A 170 -CSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPS--LPKSIFEIPDARFCAIEINSFSKPLGFAGIRLG 246 (400)
T ss_dssp -ESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTT--SCSSGGGSTTGGGTEEEEEECCGGGTTTTCCCE
T ss_pred -eCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCC--CCCchhhCCCCCCceEEEecchhhcCCcchhee
Confidence 68999999999999999999999999999999999998875311 011122221112468999999999999999999
Q ss_pred eeEeeeCCHHH-------HHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 282 CLSVLCEDEKQ-------AVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 282 ~~~~~~~~~~~-------~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
|++++ ++. ++.+.... ....+++++.++|.++..+|++.
T Consensus 247 ~~~~~---~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~l~~~ 292 (400)
T 3asa_A 247 WTVIP---QELTYADGHFVIQDWERF---LSTTFNGASIPAQEAGVAGLSIL 292 (400)
T ss_dssp EEECC---TTCBCTTSCBHHHHHHHH---HHHHCCCCCHHHHHHHHHHHHHT
T ss_pred EEeeC---hhhccchhhhHHHHHHHH---hccCccCCChHHHHHHHHHhCcH
Confidence 99863 233 23332211 12234467889999999888753
No 63
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=1.7e-32 Score=260.45 Aligned_cols=262 Identities=20% Similarity=0.149 Sum_probs=191.7
Q ss_pred CCCCCCCchhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCC
Q 047180 30 VEPAAKDPILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGD 109 (337)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~ 109 (337)
+...+.+.+..+....+. ++.|||+.|.+. ..+++.+.+++.+.... ...|++..|..+||+++++|+ +.
T Consensus 7 ~~~~~~~~~~~~~~~~~~---~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~-~~ 76 (381)
T 1v2d_A 7 TEAAKESIFPRMSGLAQR---LGAVNLGQGFPS-----NPPPPFLLEAVRRALGR-QDQYAPPAGLPALREALAEEF-AV 76 (381)
T ss_dssp GGGC---CHHHHHHHHHH---HTCEECCCCSCS-----SCCCHHHHHHHHHHTTT-SCSCCCTTCCHHHHHHHHHHH-TS
T ss_pred hhhcCccHHHHHHHHHhc---CCeEEecCCCCC-----CCCCHHHHHHHHHHHHH-hcCCCCCCCCHHHHHHHHHhc-CC
Confidence 333333444444433322 458999999652 23567788877664222 457988889999999999995 32
Q ss_pred CCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc-CCCCCCChHHHHH
Q 047180 110 NSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH-PGTKGLDFAALMD 188 (337)
Q Consensus 110 ~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~-~~~~~~d~~~l~~ 188 (337)
++++ +++|+|+++++.+++..+.. +||+|++++|+|+.|...++..|++++.+|+.. ++++.+|++.+++
T Consensus 77 -----~~~~--v~~~~g~~~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~ 147 (381)
T 1v2d_A 77 -----EPES--VVVTSGATEALYVLLQSLVG--PGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPEGFRLDLSALEK 147 (381)
T ss_dssp -----CGGG--EEEESSHHHHHHHHHHHHCC--TTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHT
T ss_pred -----Chhh--EEEcCChHHHHHHHHHHhCC--CCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCccCCcCHHHHHH
Confidence 2344 57899999999999987755 899999999999999999999999999998740 2247899999988
Q ss_pred HHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEec
Q 047180 189 DIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 189 ~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
.+. + +..++++++||||||.+++.+++++|+++|+++|+++|+||+|.++.++.... ++..+ ..++++++.|
T Consensus 148 ~l~--~-~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~---~~~~~--~~~~~~~~~s 219 (381)
T 1v2d_A 148 ALT--P-RTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPR---RLREF--APERTFTVGS 219 (381)
T ss_dssp TCC--T-TEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC---CHHHH--CTTTEEEEEE
T ss_pred hcC--c-CCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCC---CHHHh--cCCCEEEEee
Confidence 774 2 33444447999999999999999999999999999999999999987531111 12222 2357899999
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|||.||++|+|+||+++ ++++++.+... ......+++.+.|.++..+|+.
T Consensus 220 ~sK~~~~~G~r~G~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~a~~~~l~~ 269 (381)
T 1v2d_A 220 AGKRLEATGYRVGWIVG---PKEFMPRLAGM----RQWTSFSAPTPLQAGVAEALKL 269 (381)
T ss_dssp HHHHTTCGGGCCEEEEC---CTTTHHHHHHH----HHHHTSSCCHHHHHHHHHHHHH
T ss_pred chhhcCCcccceEEEEe---CHHHHHHHHHH----HhhcccCCCcHHHHHHHHHHhC
Confidence 99999999999999986 34455554432 2222235678899988888873
No 64
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=1.3e-32 Score=261.93 Aligned_cols=254 Identities=13% Similarity=0.047 Sum_probs=185.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHH-HHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVK-MVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~-lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
++.|||+.|.+ ...+++.+.+++.+.......+|++. ..+ +|+++++|+....+...++++ +++|+|+++
T Consensus 28 ~~~i~l~~~~~-----~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~--v~~t~g~~~ 98 (390)
T 1d2f_A 28 ADLLPFTISDM-----DFATAPCIIEALNQRLMHGVFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQT--VVYGPSVIY 98 (390)
T ss_dssp --CEECCSSSC-----SSCCCHHHHHHHHHHHTTCCCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGG--EEEESCHHH
T ss_pred CCeeEeeecCC-----CCCCCHHHHHHHHHHHhCCCCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHH--EEEcCCHHH
Confidence 36899998854 23466788888766422234678764 788 999999998543332234455 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCC-CCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPG-TKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
++.+++..+.. |||+|+++.|+|+.|...++..|++++.+|+..++ ++.+|++.+++.++.. +..++++++||||
T Consensus 99 al~~~~~~l~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~--~~~~v~l~~p~np 174 (390)
T 1d2f_A 99 MVSELIRQWSE--TGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKP--ECKIMLLCSPQNP 174 (390)
T ss_dssp HHHHHHHHSSC--TTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTST--TEEEEEEESSCTT
T ss_pred HHHHHHHHhcC--CCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccC--CCeEEEEeCCCCC
Confidence 99999988765 89999999999999999999999999999974331 3568999999988632 2344444799999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|+++|++||+||+|.++.++. ....++..+....... +.||||.||++|+|+||+++ +
T Consensus 175 tG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~d~--~~s~sK~~~~~G~r~G~~~~--~ 248 (390)
T 1d2f_A 175 TGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGE--QPHIPWSNVARGDWAL--LTSGSKSFNIPALTGAYGII--E 248 (390)
T ss_dssp TCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSS--SCCCCGGGTCCSSEEE--EECSHHHHTCGGGCCEEEEE--C
T ss_pred CCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCC--CCCcCHHHcchhhHhh--ccCccHhhcccChhheEEEE--C
Confidence 9999999999999999999999999999999987531 1111122121111023 89999999999999999986 4
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++.+..... ....+++++.++|.++..+|++
T Consensus 249 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~l~~ 283 (390)
T 1d2f_A 249 NSSSRDAYLSALK--GRDGLSSPSVLALTAHIAAYQQ 283 (390)
T ss_dssp SHHHHHHHHHHHH--TTSCCCSCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHh--hhcccCCCCHHHHHHHHHHHhc
Confidence 5666555543211 0123446788899888888874
No 65
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=4.8e-32 Score=255.41 Aligned_cols=249 Identities=13% Similarity=0.150 Sum_probs=188.9
Q ss_pred CCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 49 PSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 49 ~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
..++.|||+.|.+. ..+++.+.+++.+.. .....| |..|..++|+++++++ + .++++ +++|+|++
T Consensus 30 ~~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~-~~~~~y-~~~~~~~lr~~la~~~-~-----~~~~~--v~~~~g~t 94 (363)
T 3ffh_A 30 GLTKITKLSSNENP-----LGTSKKVAAIQANSS-VETEIY-PDGWASSLRKEVADFY-Q-----LEEEE--LIFTAGVD 94 (363)
T ss_dssp TCSCCEECSSCSCT-----TCCCHHHHHHHHTCB-SCCCBC-----CHHHHHHHHHHH-T-----CCGGG--EEEESSHH
T ss_pred CCCceEEccCCCCC-----CCCCHHHHHHHHHHH-HHhhcC-CCcchHHHHHHHHHHh-C-----CChhh--EEEeCCHH
Confidence 33578999998542 346678888876632 234556 5578999999999997 3 22344 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.. +||+|++++|+|+.|...++..|++++.+|+. + ++.+|++++++.+.. +..++++++||||
T Consensus 95 ~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~---~~~~v~~~~p~np 167 (363)
T 3ffh_A 95 ELIELLTRVLLD--TTTNTVMATPTFVQYRQNALIEGAEVREIPLL-Q-DGEHDLEGMLNAIDE---KTTIVWICNPNNP 167 (363)
T ss_dssp HHHHHHHHHHCS--TTCEEEEEESSCHHHHHHHHHHTCEEEEEECC-T-TSCCCHHHHHHHCCT---TEEEEEEESSCTT
T ss_pred HHHHHHHHHHcc--CCCEEEEcCCChHHHHHHHHHcCCEEEEecCC-C-CCCcCHHHHHHhccc---CCCEEEEeCCCCC
Confidence 999999987765 89999999999999999999999999999984 3 588999999998852 3444445899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|++.|++ |+++|+||+|.+|.++... +........++++++.||||.||++|+|+||+++
T Consensus 168 tG~~~~~~~l~~l~~~~~~-~~~li~De~~~~~~~~~~~----~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~--- 239 (363)
T 3ffh_A 168 TGNYIELADIQAFLDRVPS-DVLVVLDEAYIEYVTPQPE----KHEKLVRTYKNLIITRTFSKIYGLASARVGYGIA--- 239 (363)
T ss_dssp TCCCCCHHHHHHHHTTSCT-TSEEEEECTTGGGCSSCCC----CCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEE---
T ss_pred cCCCcCHHHHHHHHHhCCC-CcEEEEeCchHhhcCcccc----CHHHHhhcCCCEEEEeechhhhcCchhceeeeec---
Confidence 9999999999999998887 9999999999988752111 1111223356899999999999999999999986
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
++++++++.. .. ..+ +++.++|.++..+|++.+..++.+
T Consensus 240 ~~~~~~~l~~----~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~ 278 (363)
T 3ffh_A 240 DKEIIRQLNI----VR-PPF-NTTSIGQKLAIEAIKDQAFIGECR 278 (363)
T ss_dssp CHHHHHHHHH----TC-CSC-CCBHHHHHHHHHHHHCHHHHHHHH
T ss_pred CHHHHHHHHH----hC-CCC-CCCHHHHHHHHHHhcCHHHHHHHH
Confidence 5665555433 22 234 578999999999998765444443
No 66
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=1.8e-33 Score=272.51 Aligned_cols=276 Identities=17% Similarity=0.119 Sum_probs=192.6
Q ss_pred CCchhhHHHHHhc-CCCCCee-EeeeeeeecCCCCcccchHHHHHHHHh-cC-------c----CCCCCCCCCCCHHHHH
Q 047180 35 KDPILGVTEAFLA-DPSPDKV-NVGVGAYRDDNGKPVVLECVREAERRI-AG-------T----ANMEYLPMGGSVKMVE 100 (337)
Q Consensus 35 ~~~~~~~~~~~~~-~~~~~~i-~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~-------~----~~~~Y~~~~G~~~lr~ 100 (337)
++.+..+...+.+ ...+++| +|+.|.|. ..+.+.+.+.++++++ .. . ...+|.+..|.++||+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~i~~l~~g~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~ 90 (444)
T 3if2_A 14 PTGISQLMDDLGDALKSDQPVNMLGGGNPA---KIDAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGDSAFID 90 (444)
T ss_dssp CCHHHHHHHHHHHHHHSSSCCEECSCCCCC---CCHHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCCHHHHH
T ss_pred chhHHHHHHHHHhhhcCchhhhccCCCCCC---cccchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCCHHHHH
Confidence 3455555443322 1236789 99999753 2223335566666654 22 1 1257999999999999
Q ss_pred HHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCC--------------eEEEc-CCCCcchHHH-----
Q 047180 101 ETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDS--------------QIYIP-VPTWSNHHNI----- 160 (337)
Q Consensus 101 aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd--------------~Vlv~-~P~y~~y~~~----- 160 (337)
++|+|+...++...++++ +++|+|+++++.+++..+.. +|| +|+++ +|+|+.|...
T Consensus 91 ~ia~~l~~~~g~~~~~~~--i~~t~G~t~al~~~~~~l~~--~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~~ 166 (444)
T 3if2_A 91 ALVGFFNRHYDWNLTSEN--IALTNGSQNAFFYLFNLFGG--AFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEGQ 166 (444)
T ss_dssp HHHHHHHHHHCCCCCGGG--EEEESSHHHHHHHHHHHSSE--EEECC-------CEEEEEEEESSSSCCGGGTTCCSSSC
T ss_pred HHHHHHHhhcCCCCCHHH--EEEecCcHHHHHHHHHHHhC--CCccccccccccccccceEEEeCCCCccchhhcccccc
Confidence 999998544333345565 57899999999999988766 787 78876 9999999863
Q ss_pred -HHhcCceeeEeeeccCC---CCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 161 -WRDAHVTQRTFHYYHPG---TKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 161 -~~~~G~~~~~~~~~~~~---~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
+...|..++.+++..++ ++++|++.+++++.....++.++++++||||||.+++.+++++|+++|+++|++||+||
T Consensus 167 ~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De 246 (444)
T 3if2_A 167 HFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIIDN 246 (444)
T ss_dssp CEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEEC
Confidence 45577888888863211 25799999998743211234455558999999999999999999999999999999999
Q ss_pred cCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHH
Q 047180 237 AYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGA 316 (337)
Q Consensus 237 ~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q 316 (337)
+|..+..+....+ .. ....++++++.||||. +++|+|+||+++ ++++++.+.. .......+++.++|
T Consensus 247 ~~~~~~~~~~~~~---~~--~~~~~~~i~~~S~sK~-~~~G~r~G~~~~---~~~l~~~~~~----~~~~~~~~~~~~~~ 313 (444)
T 3if2_A 247 AYGMPFPNIIYSD---AH--LNWDNNTILCFSLSKI-GLPGMRTGIIVA---DAKVIEAVSA----MNAVVNLAPTRFGA 313 (444)
T ss_dssp TTCTTTTCCBCSC---CC--CCCCTTEEEEEESTTT-TCGGGCCEEEEC---CHHHHHHHHH----HHHHHHSSCCCHHH
T ss_pred CCCCccccccccc---cc--ccCCCCEEEEechhhc-cCCCCceEEEEE---CHHHHHHHHH----HHHhccCCCChHHH
Confidence 9986432100000 00 1123578999999996 889999999875 5666555543 22223345788999
Q ss_pred HHHHHHhCCHHHHH
Q 047180 317 LIVSTILGDAELKK 330 (337)
Q Consensus 317 ~~~~~~l~~~~~~~ 330 (337)
.++..++++.++.+
T Consensus 314 ~a~~~~l~~~~~~~ 327 (444)
T 3if2_A 314 AIATPLVANDRIKQ 327 (444)
T ss_dssp HHHHHHHHTSHHHH
T ss_pred HHHHHHHHcCchhH
Confidence 99999998765443
No 67
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=3.6e-32 Score=262.11 Aligned_cols=256 Identities=13% Similarity=0.083 Sum_probs=194.5
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
..+.|||++|.+ ....+|.+.+|+.+......++|++. ..++++++++|+....++..++++ ++.|+|+++
T Consensus 60 g~~~i~~~~~~~-----~~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~--v~~~~g~~e 130 (421)
T 3l8a_A 60 NPELLQMWVADM-----DFLPVPEIKEAIINYGREHIFGYNYF--NDDLYQAVIDWERKEHDYAVVKED--ILFIDGVVP 130 (421)
T ss_dssp CTTCEECCSSCC-----CSCCCHHHHHHHHHHHHHCCSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGG--EEEESCHHH
T ss_pred CCCeeecccCCC-----CCCCCHHHHHHHHHHHhcCCcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHH--EEEcCCHHH
Confidence 457899999853 24467788887765312235678764 489999999998654433344555 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec-cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY-HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
|+.+++..+.. +||+|+++.|+|+.|...++..|.+++.+|+. ...++.+|++.+++++.+ + +..++++++||||
T Consensus 131 a~~~a~~~~~~--~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~-~-~~~~vil~~p~np 206 (421)
T 3l8a_A 131 AISIALQAFSE--KGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIID-N-NVKIYLLCSPHNP 206 (421)
T ss_dssp HHHHHHHHHSC--TEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHH-T-TEEEEEEESSBTT
T ss_pred HHHHHHHHhcC--CCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhc-c-CCeEEEECCCCCC
Confidence 99999988766 89999999999999999999999999999974 333567899999999873 2 3444455899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh-cCCeEEEEecccccccccccccceeEeee
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK-DGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
||.+++++++++|+++|+++|++||+||+|.+|.+... ...++..+.. ..++++++.||||.||++|+|+||+++
T Consensus 207 tG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~--~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~-- 282 (421)
T 3l8a_A 207 GGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGN--THHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAII-- 282 (421)
T ss_dssp TTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC--CCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEEC--
T ss_pred CCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC--CCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEc--
Confidence 99999999999999999999999999999999875321 1111222221 135789999999999999999999986
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+|+++++.+..... ...+.+++.++|.++..+|+.
T Consensus 283 ~~~~l~~~~~~~~~---~~~~~~~n~~~~~a~~aal~~ 317 (421)
T 3l8a_A 283 QNESLRRKFQYRQL---ANNQHEVPTVGMIATQAAFQY 317 (421)
T ss_dssp CSHHHHHHHHHHHH---HTTCSCCCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH---hcccCCCCHHHHHHHHHHHhc
Confidence 46777666654322 223446788999999888873
No 68
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=5.8e-33 Score=276.74 Aligned_cols=221 Identities=13% Similarity=0.062 Sum_probs=161.5
Q ss_pred eeEeeeeeeecCCCCcccchHHHHHHH-HhcCcCCCCCCCCCCCHHHHHHHHHHHhCC-CCc---ccccCceeEEeeccc
Q 047180 53 KVNVGVGAYRDDNGKPVVLECVREAER-RIAGTANMEYLPMGGSVKMVEETLKLAYGD-NSE---FIKDKRIAAVQSLSG 127 (337)
Q Consensus 53 ~i~l~~G~~~~~~~~~~~~~~v~~a~~-~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~-~~~---~~~~~~i~~~~t~g~ 127 (337)
.|+|++|.+. . +++.+.+++. .+. ..+|++..|.+++|+++++++..+ ... ..++++ +++|+|+
T Consensus 106 ~i~l~~g~~~-----~-~~~~~~~al~~~~~---~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~--I~~t~G~ 174 (546)
T 2zy4_A 106 SLSYVRDQLG-----L-DPAAFLHEMVDGIL---GCNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVN--LFAVEGG 174 (546)
T ss_dssp HHHHHHHTSC-----C-CHHHHHHHHHHHHH---TCSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEE--EEEEEHH
T ss_pred hhecccCCCC-----C-CChHHHHHHHHhhh---cCCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcce--EEEECCH
Confidence 7899998642 2 2344444433 332 257999999999999988765322 211 112344 6889999
Q ss_pred hhHHHHHHHHHh---hhCCCCeEEEcCCCCcchHHHHHhc--CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEe
Q 047180 128 TGACRLFADFQK---RFHPDSQIYIPVPTWSNHHNIWRDA--HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLH 202 (337)
Q Consensus 128 ~~al~~~~~~l~---~~~pgd~Vlv~~P~y~~y~~~~~~~--G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~ 202 (337)
++++.++++++. -..|||+|++++|+|+.|...+... |++++.+++..+++|.+|++.+++.+. ++.+++++
T Consensus 175 ~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~--~~~k~v~l- 251 (546)
T 2zy4_A 175 TAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKD--PAIKIFFC- 251 (546)
T ss_dssp HHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGS--TTEEEEEE-
T ss_pred HHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhC--CCCeEEEE-
Confidence 999999987641 1238999999999999999886654 688899987544457899999987653 23344444
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHH--HhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccccc
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQI--KAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV 280 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~--~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv 280 (337)
||||||||.+++.+++++|+++| +++|++||+||+|.+|.++ + . ++... ..+++++++||||.||++|||+
T Consensus 252 ~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~-~-~---s~~~~--~~~~~i~~~S~SK~~g~~GlRi 324 (546)
T 2zy4_A 252 VNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD-F-Q---SLFAI--CPENTLLVYSFSKYFGATGWRL 324 (546)
T ss_dssp ESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT-C-C---CHHHH--CGGGEEEEEESTTTTTCGGGCE
T ss_pred ECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc-C-c---CHHHh--CCCCEEEEEeCccccCCCCcce
Confidence 79999999999999999999999 7789999999999998742 1 1 12222 1257999999999999999999
Q ss_pred ceeEeeeCCHHHHHHH
Q 047180 281 GCLSVLCEDEKQAVAV 296 (337)
Q Consensus 281 G~~~~~~~~~~~~~~~ 296 (337)
||++++ ++++++++
T Consensus 325 G~~~~~--~~~l~~~l 338 (546)
T 2zy4_A 325 GVVAAH--QQNVFDLA 338 (546)
T ss_dssp EEEEEE--SSCHHHHH
T ss_pred EEEEEC--CHHHHHHH
Confidence 999873 33344544
No 69
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=9.4e-33 Score=274.63 Aligned_cols=249 Identities=14% Similarity=0.042 Sum_probs=183.2
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCC-CCCCCHHHHHHHHHHHhCC-CC-cccc-cCceeEEeeccc
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYL-PMGGSVKMVEETLKLAYGD-NS-EFIK-DKRIAAVQSLSG 127 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~-~~~G~~~lr~aia~~~~~~-~~-~~~~-~~~i~~~~t~g~ 127 (337)
++|+|+.|.+. ..+++.+.++.+++.. ..|+ |..|.+++|+++++++... +. ...+ ++ ++++|.|+
T Consensus 104 ~~i~l~~g~~~-----~~~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~--~i~~t~G~ 173 (533)
T 3f6t_A 104 DAVNYCHTELG-----LNRDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQELSYKDANLAEQT--DLFPTEGG 173 (533)
T ss_dssp HHHHHHHHTTC-----CCHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGE--EEEEEEHH
T ss_pred hheeccCCCCC-----cCCcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcc--eEEEECCH
Confidence 36889988653 2234445555555532 2454 7889999999999998433 22 1122 23 36889999
Q ss_pred hhHHHHHHHH-----HhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc--CCCCCCChHHHHHHHHcCCCCeEEE
Q 047180 128 TGACRLFADF-----QKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH--PGTKGLDFAALMDDIKNAPNGSFFL 200 (337)
Q Consensus 128 ~~al~~~~~~-----l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~~~il 200 (337)
++++.+++.. +.. |||+|++++|+|+.|...++..|++++.+++.. ++++++|++.+++.+. ++.++++
T Consensus 174 t~al~~~~~~l~~~~l~~--~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~--~~~k~v~ 249 (533)
T 3f6t_A 174 TAAIVYAFHSLAENHLLK--KGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKD--PSIKALI 249 (533)
T ss_dssp HHHHHHHHHHHHHTTSSC--TTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSC--TTEEEEE
T ss_pred HHHHHHHHHHhhhhhccC--CcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhC--CCCeEEE
Confidence 9999999876 344 899999999999999999999999999998743 3468899999998875 2334444
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHH-hcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccc
Q 047180 201 LHACAHNPTGVDPSEEQWKEISYQIK-AKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQR 279 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~~~~l~~~~~-~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R 279 (337)
+ ++||||||.+++.+++++|+++|+ +++++||+||+|.+|.++ + . ++... ..+++++++||||.||++|||
T Consensus 250 l-~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~-~-~---~~~~~--~~~~~i~~~S~SK~~g~~G~R 321 (533)
T 3f6t_A 250 V-VNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPN-F-K---SIYSV--VPYNTMLVYSYSKLFGCTGWR 321 (533)
T ss_dssp E-ESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTT-C-C---CHHHH--SGGGEEEEEESHHHHTCGGGC
T ss_pred E-eCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccC-c-c---CHhhc--CCCCEEEEecCcccCCCcccc
Confidence 4 689999999999999999999999 589999999999998753 1 1 12222 235899999999999999999
Q ss_pred cceeEeeeCCHHHHHHHHHH--------------------------------HHhhhcccccCCChhHHHH----HHHHh
Q 047180 280 VGCLSVLCEDEKQAVAVKSQ--------------------------------LQQLARPMYSNPPVHGALI----VSTIL 323 (337)
Q Consensus 280 vG~~~~~~~~~~~~~~~~~~--------------------------------l~~~~~~~~~~~~~~~q~~----~~~~l 323 (337)
+||++++ +...++++... +........++++.+.|.+ +..+|
T Consensus 322 iG~l~~~--~~~~~~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L 399 (533)
T 3f6t_A 322 LGVIALN--EKNVFDDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHL 399 (533)
T ss_dssp EEEEEEE--SSCHHHHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHH
T ss_pred eEEEEEC--cHHHHHHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHH
Confidence 9999874 33333444332 2334444566788888988 44556
Q ss_pred C
Q 047180 324 G 324 (337)
Q Consensus 324 ~ 324 (337)
.
T Consensus 400 ~ 400 (533)
T 3f6t_A 400 L 400 (533)
T ss_dssp T
T ss_pred h
Confidence 4
No 70
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.98 E-value=2.5e-31 Score=251.66 Aligned_cols=215 Identities=18% Similarity=0.186 Sum_probs=172.8
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhc
Q 047180 85 ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDA 164 (337)
Q Consensus 85 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~ 164 (337)
...+|++..|.++||+++++|+.+ .++++ +++|+||++|+.+++..+.. |||+|++++|+|+.+...++..
T Consensus 55 ~~~~y~~~~g~~~l~~~la~~~~~-----~~~~~--v~~~~g~~~a~~~~~~~l~~--~gd~Vl~~~~~~~~~~~~~~~~ 125 (375)
T 3op7_A 55 TKLNYGWIEGSPAFKKSVSQLYTG-----VKPEQ--ILQTNGATGANLLVLYSLIE--PGDHVISLYPTYQQLYDIPKSL 125 (375)
T ss_dssp SCCSSCCTTCCHHHHHHHHTTSSS-----CCGGG--EEEESHHHHHHHHHHHHHCC--TTCEEEEEESSCTHHHHHHHHT
T ss_pred CCcCCCCCCChHHHHHHHHHHhcc-----CChhh--EEEcCChHHHHHHHHHHhcC--CCCEEEEeCCCchhHHHHHHHc
Confidence 356799999999999999998732 22444 57899999999999988766 9999999999999999999999
Q ss_pred CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCC
Q 047180 165 HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASG 244 (337)
Q Consensus 165 G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~ 244 (337)
|++++.+|+..++++.+|++.++++++. +.+++++ ++||||||.+++.+++++|+++|++||++||+||+|.++.++
T Consensus 126 g~~~~~v~~~~~~~~~~d~~~l~~~l~~--~~~~v~~-~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~ 202 (375)
T 3op7_A 126 GAEVDLWQIEEENGWLPDLEKLRQLIRP--TTKMICI-NNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSEL 202 (375)
T ss_dssp TCEEEEEEEEGGGTTEECHHHHHHHCCT--TCCEEEE-ESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSS
T ss_pred CCEEEEEeccccCCCCCCHHHHHHhhcc--CCeEEEE-cCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccc
Confidence 9999999985444677899999998863 3345554 789999999999999999999999999999999999998753
Q ss_pred CCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 245 DPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.. .+ +....++++++.||||.||++|+|+||+++ ++++++.+ .........+++.+.|.++..+|+
T Consensus 203 ~~----~~---~~~~~~~~i~~~s~sK~~~~~G~r~G~v~~---~~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~l~ 268 (375)
T 3op7_A 203 DV----PS---IIEVYDKGIAVNSLSKTYSLPGIRIGWVAA---NHQVTDIL----RDYRDYTMICAGVFDDLVAQLALA 268 (375)
T ss_dssp CC----CC---HHHHCTTEEEEEESSSSSSCGGGCCEEEEC---CHHHHHHH----TTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred CC----Cc---hhhhcCCEEEEeEChhhcCCcccceEEEEe---CHHHHHHH----HHHHhhhccCCCcHHHHHHHHHHh
Confidence 11 11 122245789999999999999999999985 56655544 333333344568889998888888
Q ss_pred C
Q 047180 325 D 325 (337)
Q Consensus 325 ~ 325 (337)
+
T Consensus 269 ~ 269 (375)
T 3op7_A 269 H 269 (375)
T ss_dssp T
T ss_pred c
Confidence 6
No 71
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.97 E-value=1.8e-30 Score=245.13 Aligned_cols=258 Identities=14% Similarity=0.125 Sum_probs=186.5
Q ss_pred chhhHHHHHhcCCCCCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc
Q 047180 37 PILGVTEAFLADPSPDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD 116 (337)
Q Consensus 37 ~~~~~~~~~~~~~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~ 116 (337)
.+..+.+.+..+ ....|||+.|.+. ..+++.+.+++.+... ....|++ .|..++|+++++++ + .++
T Consensus 11 ~~~~~~~~~~~~-~~~~idl~~~~~~-----~~~~~~v~~a~~~~~~-~~~~y~~-~~~~~l~~~la~~~-~-----~~~ 76 (364)
T 1lc5_A 11 NIREPATVLGIS-PDQLLDFSANINP-----LGMPVSVKRALIDNLD-CIERYPD-ADYFHLHQALARHH-Q-----VPA 76 (364)
T ss_dssp CCHHHHHHHTSC-GGGSEECSSCCCT-----TCCCHHHHHHHHHTGG-GGGSCCC-TTCHHHHHHHHHHH-T-----SCG
T ss_pred cHHHHHHhcCCC-ccceEEeccccCC-----CCCCHHHHHHHHHHHH-HhhcCCC-CCHHHHHHHHHHHH-C-----cCH
Confidence 344444444333 2358999998631 2356778887766311 1457854 58999999999998 2 223
Q ss_pred CceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 117 KRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 117 ~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
++ +++|+|+++++.+++..+ +||+|++++|+|+.|...++..|++++.+|+..++++.+ ++++.+.+. ++.
T Consensus 77 ~~--v~~~~g~~~al~~~~~~~----~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~--~~~ 147 (364)
T 1lc5_A 77 SW--ILAGNGETESIFTVASGL----KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALT--PDL 147 (364)
T ss_dssp GG--EEEESSHHHHHHHHHHHH----CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCC--TTC
T ss_pred HH--EEECCCHHHHHHHHHHHc----CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhcc--CCC
Confidence 44 578999999999998877 479999999999999999999999999998743223333 465655543 233
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
++++ +++||||||.+++.+++++|+++|+++++++|+||+|.++.++ . .. .+. +....++++++.||||.||++
T Consensus 148 ~~v~-i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~-~~--~~~-~~~~~~~~i~~~s~sK~~~~~ 221 (364)
T 1lc5_A 148 DCLF-LCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPH-E-TG--FIP-ALKDNPHIWVLRSLTKFYAIP 221 (364)
T ss_dssp CEEE-EESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTT-C-CC--SGG-GCTTCTTEEEEEESTTTTTCT
T ss_pred CEEE-EeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccC-c-cc--hhh-HhccCCCEEEEEECchhhcCC
Confidence 4444 4889999999999999999999999999999999999988753 1 11 111 112235789999999999999
Q ss_pred ccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHH
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKL 331 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~ 331 (337)
|+|+||++. .++++++++.. .. ..+ +++.++|.++..+|++.+..++
T Consensus 222 G~r~G~~~~--~~~~~~~~l~~----~~-~~~-~~~~~~~~~~~~~l~~~~~~~~ 268 (364)
T 1lc5_A 222 GLRLGYLVN--SDDAAMARMRR----QQ-MPW-SVNALAALAGEVALQDSAWQQA 268 (364)
T ss_dssp TTCCEEEEC--CCHHHHHHHHH----HS-CTT-CSCHHHHHHHHHGGGCHHHHHH
T ss_pred ccceEEEEE--CCHHHHHHHHH----hC-CCC-CCCHHHHHHHHHHHhCcHHHHH
Confidence 999999982 25666555543 22 234 5788999999999998544333
No 72
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.97 E-value=8e-31 Score=247.42 Aligned_cols=247 Identities=18% Similarity=0.126 Sum_probs=189.5
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
.++.|+|+.|.+. ..+++.+.+++.+. ......+|++ .|..+||+++++++ +.. ++++ +++|+|++
T Consensus 29 ~~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~-g~~----~~~~--i~~~~g~t 95 (367)
T 3euc_A 29 SHGLVKLDAMENP-----YRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM-QVP----AGME--VLLGNGSD 95 (367)
T ss_dssp CTTCEECCSSCCC-----CCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH-TCC----TTCE--EEEEEHHH
T ss_pred CCCeeEccCCCCC-----CCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh-CCC----Ccce--EEEcCCHH
Confidence 3578999998631 33567777776553 3223567865 58899999999997 321 2333 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.. +||+|+++.|+|+.|...++..|++++.+|+.. ++.+|++.+++.+.+. +.+++++ ++||||
T Consensus 96 ~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~-~~~~v~~-~~~~np 169 (367)
T 3euc_A 96 EIISMLALAAAR--PGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEH-QPAIVYL-AYPNNP 169 (367)
T ss_dssp HHHHHHHHHTCC--TTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHH-CCSEEEE-ESSCTT
T ss_pred HHHHHHHHHHcC--CCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhcc-CCCEEEE-cCCCCC
Confidence 999999988765 899999999999999999999999999999843 5789999999998742 2345555 789999
Q ss_pred CCCCCCHHHHHHHHHHHHhc--CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 209 TGVDPSEEQWKEISYQIKAK--GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~--~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
||.+++.+++++|+++|++| |+++|+||+|.+|..+.. .. .....++++++.||||. +++|+|+||+++
T Consensus 170 tG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~------~~-~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~- 240 (367)
T 3euc_A 170 TGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW------MS-RLTDFGNLLVMRTVSKL-GLAGIRLGYVAG- 240 (367)
T ss_dssp TCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCS------GG-GGGTCTTEEEEEECCCT-TSCSCCEEEEEE-
T ss_pred CCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccch------HH-HHhhCCCEEEEecchhh-cccccCceeeee-
Confidence 99999999999999999999 999999999999863211 11 12334678999999999 999999999986
Q ss_pred eCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHH
Q 047180 287 CEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLW 332 (337)
Q Consensus 287 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w 332 (337)
+++++++ +.... ..+ +++.++|.++..+|++.+..++.
T Consensus 241 --~~~~~~~----~~~~~-~~~-~~~~~~~~a~~~~l~~~~~~~~~ 278 (367)
T 3euc_A 241 --DPQWLEQ----LDKVR-PPY-NVNVLTEATALFALEHVAVLDEQ 278 (367)
T ss_dssp --CHHHHHH----HGGGC-CSS-CCCHHHHHHHHHHHTTHHHHHHH
T ss_pred --CHHHHHH----HHHhC-CCC-CCCHHHHHHHHHHhcCHHHHHHH
Confidence 4554443 33332 233 57899999999999985443333
No 73
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.97 E-value=8.9e-31 Score=246.18 Aligned_cols=244 Identities=14% Similarity=0.113 Sum_probs=183.7
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
.++.|||+.|.+. ..+++.+.+++.+. .. ...| +..|..++|+++++++ + .++++ +++|+|++
T Consensus 25 ~~~~idl~~~~~~-----~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~l~~~la~~~-~-----~~~~~--i~~~~g~t 88 (361)
T 3ftb_A 25 GRELLDYSSNINP-----LGIPKSFLNNIDEGIKN--LGVY-PDVNYRRLNKSIENYL-K-----LKDIG--IVLGNGAS 88 (361)
T ss_dssp ---CEETTCCCCT-----TCSCHHHHTTHHHHHHG--GGSC-CCTTCHHHHHHHHHHH-T-----CCSCE--EEEESSHH
T ss_pred CCCEEEecCCCCC-----CCCCHHHHHHHHHHHHH--hcCC-CCccHHHHHHHHHHHh-C-----CCcce--EEEcCCHH
Confidence 3568999998642 23567777776553 22 3567 5578999999999998 2 22343 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+ |+|+++.|+|+.|...++..|++++.+|+.. +.+++++.+++.+++ .++++ +++||||
T Consensus 89 ~al~~~~~~~------d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~l~~~l~~---~~~v~-i~~p~np 156 (361)
T 3ftb_A 89 EIIELSISLF------EKILIIVPSYAEYEINAKKHGVSVVFSYLDE--NMCIDYEDIISKIDD---VDSVI-IGNPNNP 156 (361)
T ss_dssp HHHHHHHTTC------SEEEEEESCCTHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHTTT---CSEEE-EETTBTT
T ss_pred HHHHHHHHHc------CcEEEecCChHHHHHHHHHcCCeEEEeecCc--ccCCCHHHHHHhccC---CCEEE-EeCCCCC
Confidence 9999887654 8999999999999999999999999999843 356788999988863 34555 4889999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeC
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 288 (337)
||.+++.+++++|+++|+++|+++|+||+|.++.++ ... +...+....++++++.||||.||++|+|+||++. .
T Consensus 157 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~---~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~--~ 230 (361)
T 3ftb_A 157 NGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSS---SFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGIT--N 230 (361)
T ss_dssp TTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTS---SSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEE--S
T ss_pred CCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC-ccc---chhHhcccCCCEEEEeeChhhcCCCCcceeEEEe--C
Confidence 999999999999999999999999999999998753 111 1111223346889999999999999999999874 3
Q ss_pred CHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 289 DEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
++++++.+. ... ..+ +++.++|.++..+|++.+..++.+
T Consensus 231 ~~~~~~~~~----~~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~ 269 (361)
T 3ftb_A 231 NKEIAAKIK----AKQ-NPW-NINCFAEMAAINCLKDTNYIEESL 269 (361)
T ss_dssp CHHHHHHHH----TTS-CTT-CSCHHHHHHHHHTSSCHHHHHHHH
T ss_pred CHHHHHHHH----hhC-CCC-CCCHHHHHHHHHHhcCHHHHHHHH
Confidence 666555443 322 233 578899999999999855444433
No 74
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.95 E-value=7e-34 Score=271.29 Aligned_cols=253 Identities=13% Similarity=0.079 Sum_probs=188.6
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGAC 131 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al 131 (337)
+.+||+.|.+. ..+++.+.+++.+.......+|++. ..++|+++++|+....+...++++ +++|+|+++++
T Consensus 32 ~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~--v~~~~g~~~a~ 102 (392)
T 3b1d_A 32 QLLPAWIADMD-----FEVMPEVKQAIHDYAEQLVYGYTYA--SDELLQAVLDWEKSEHQYSFDKED--IVFVEGVVPAI 102 (392)
Confidence 67999999652 3456677777655322234678764 789999999998654443344454 57899999999
Q ss_pred HHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCC-CCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 132 RLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPG-TKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 132 ~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
.+++.++.. +||+|+++.|+|+.|...++..|++++.+|+.+++ +|.+|++.+++.+.+. +.++++ +++||||||
T Consensus 103 ~~~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~-~~~~v~-~~~~~nptG 178 (392)
T 3b1d_A 103 SIAIQAFTK--EGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVEN-DVKLYL-LCNPHNPGG 178 (392)
Confidence 999887766 89999999999999999999999999999873222 3668999999888632 233444 489999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEecccccccccccccceeEeeeCC
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
.+++.+++++|+++|++++++||+||+|.++.++. ....++..+... .+++++++||||.||++|+|+||+++ ++
T Consensus 179 ~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~--~~ 254 (392)
T 3b1d_A 179 RVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFG--HEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAII--EN 254 (392)
Confidence 99999999999999999999999999999987531 111222222221 45789999999999999999999986 34
Q ss_pred HHHHHHHHHHHHhhhccc-ccCCChhHHHHHHHHhCC
Q 047180 290 EKQAVAVKSQLQQLARPM-YSNPPVHGALIVSTILGD 325 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~ 325 (337)
+++++.+.. ..... +++++.++|.++..+|++
T Consensus 255 ~~~~~~~~~----~~~~~~~~~~~~~~~~a~~~~l~~ 287 (392)
T 3b1d_A 255 PTLCAQFKH----QQLVNNHHEVSSLGYIATETAYRY 287 (392)
Confidence 445554433 22222 345678899989888875
No 75
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.97 E-value=9.9e-32 Score=257.14 Aligned_cols=233 Identities=14% Similarity=0.058 Sum_probs=165.6
Q ss_pred CCCCeeEeeeeeeecCCCCcccchHHHHHHHHh---cC-cCCCCCCCCCCC-----HHHHHHHHHHHhCCCCccccc-Cc
Q 047180 49 PSPDKVNVGVGAYRDDNGKPVVLECVREAERRI---AG-TANMEYLPMGGS-----VKMVEETLKLAYGDNSEFIKD-KR 118 (337)
Q Consensus 49 ~~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~---~~-~~~~~Y~~~~G~-----~~lr~aia~~~~~~~~~~~~~-~~ 118 (337)
..+++|+|+.|.+. +..++.+.++..+. .. ....+|++..|. ++||+++|+|+. .++...++ ++
T Consensus 20 ~~~~~i~l~~g~p~-----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~ 93 (391)
T 3bwn_A 20 MSDFVVNLDHGDPT-----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRY 93 (391)
T ss_dssp TTTSCEECSSCCCG-----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSE
T ss_pred CCCCeeEcCCCCCC-----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCe
Confidence 34578999999652 33445566654221 11 135689999998 999999999985 32333333 34
Q ss_pred eeEEeeccchhHHHHHHHHHhhhCCCC----eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC
Q 047180 119 IAAVQSLSGTGACRLFADFQKRFHPDS----QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP 194 (337)
Q Consensus 119 i~~~~t~g~~~al~~~~~~l~~~~pgd----~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 194 (337)
+++|+|+++++.+++.++.+ ||| +|++++|+|+.|...++..|++++.+++. . .+++ . +
T Consensus 94 --i~~t~G~~~al~~~~~~l~~--~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d-~--~~l~---------~-~ 156 (391)
T 3bwn_A 94 --IVVGTGSTQLCQAAVHALSS--LARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGD-A--WGFD---------K-K 156 (391)
T ss_dssp --EEEEEHHHHHHHHHHHHHHH--TSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEE-S--TTCC---------C-C
T ss_pred --EEEeCChHHHHHHHHHHhcC--CCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCC-H--HHcC---------C-C
Confidence 57899999999999988877 999 99999999999999999999999998873 2 2222 1 2
Q ss_pred CCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 195 NGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
+.++++ +|+||||||.+++ +|++.+.+++++||+||+|.+ +.. .+ +....+++++++||||+||
T Consensus 157 ~~k~v~-l~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~---~~~----~~---l~~~~~~~i~~~S~SK~~g 220 (391)
T 3bwn_A 157 GPYIEL-VTSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW---PHY----TP---ITRRQDHDIMLFTFSKITG 220 (391)
T ss_dssp SCEEEE-EESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS---TTT----SC---CCCCBCCSEEEEEHHHHHS
T ss_pred CCEEEE-ECCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC---CCC----Cc---cccCCCCeEEEEechhhcC
Confidence 334554 4899999999997 354422223399999999973 111 01 1112368999999999999
Q ss_pred ccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
++|||+||+++ +++++++++.. +......+++.++|.++..+|++.
T Consensus 221 ~~GlRiG~~~~--~~~~l~~~l~~----~~~~~~~~~~~~~q~a~~~~l~~~ 266 (391)
T 3bwn_A 221 HAGSRIGWALV--KDKEVAKKMVE----YIIVNSIGVSKESQVRTAKILNVL 266 (391)
T ss_dssp CGGGCEEEEEE--CCHHHHHHHHH----HHHHHHSSCCHHHHHHHHHHHHHH
T ss_pred CCccceEEEEe--cCHHHHHHHHH----HhcccccCCCHHHHHHHHHHHhCc
Confidence 99999999986 45666655543 222233568999999999999863
No 76
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.97 E-value=3.5e-30 Score=240.58 Aligned_cols=238 Identities=18% Similarity=0.197 Sum_probs=178.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
+..|+|+.|.+. ..+++.+.+++.+. .....++|++ .|..++|+++++|+.++ ..++++ +++|+|+++
T Consensus 19 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~--v~~~~G~~~ 87 (335)
T 1uu1_A 19 RDKTYLALNENP-----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNN--VSVGNGADE 87 (335)
T ss_dssp CCSEEESSCCCS-----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGG--EEEESSHHH
T ss_pred CcceECCCCCCC-----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHH--EEEcCChHH
Confidence 357999998641 23567788877664 2233467854 47999999999998433 133444 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
++.+++..+ ||+|+++ |+|+.|...++..|++++.+|+ ++ ++++|++++ ++.+++++ ++|||||
T Consensus 88 al~~~~~~~-----gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l-------~~~~~v~l-~~p~npt 151 (335)
T 1uu1_A 88 IIYVMMLMF-----DRSVFFP-PTYSCYRIFAKAVGAKFLEVPL-TK-DLRIPEVNV-------GEGDVVFI-PNPNNPT 151 (335)
T ss_dssp HHHHHHHHS-----SEEEECS-SSCHHHHHHHHHHTCEEEECCC-CT-TSCCCCCCC-------CTTEEEEE-ESSCTTT
T ss_pred HHHHHHHHh-----CCcEEEC-CCcHHHHHHHHHcCCeEEEecc-CC-CCCCCHHHc-------CCCCEEEE-eCCCCCC
Confidence 999988765 7999999 9999999999999999999987 32 468888776 13345554 8899999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCED 289 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~ 289 (337)
|.+++.+++++|+++| + ++|+||+|.+|..+ .. .. +....++++++.||||.||++|+|+||+++ +
T Consensus 152 G~~~~~~~l~~l~~~~---~-~li~De~~~~~~~~----~~--~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~---~ 217 (335)
T 1uu1_A 152 GHVFEREEIERILKTG---A-FVALDEAYYEFHGE----SY--VD-FLKKYENLAVIRTFSKAFSLAAQRVGYVVA---S 217 (335)
T ss_dssp CCCCCHHHHHHHHHTT---C-EEEEECTTHHHHCC----CC--GG-GGGTCSSEEEEEESTTTTTCGGGCCEEEEE---C
T ss_pred CCCCCHHHHHHHHHhC---C-EEEEECcchhhcch----hH--HH-HhhhCCCEEEEecchhhcCCcccCeEEEEe---C
Confidence 9999999999999887 7 89999999987532 11 11 122345789999999999999999999986 5
Q ss_pred HHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHhh
Q 047180 290 EKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLKE 335 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~e 335 (337)
+++++++.. .. ..+ +++.++|.++..+|++.+..+++++.
T Consensus 218 ~~~~~~l~~----~~-~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~ 257 (335)
T 1uu1_A 218 EKFIDAYNR----VR-LPF-NVSYVSQMFAKVALDHREIFEERTKF 257 (335)
T ss_dssp HHHHHHHHH----HS-CTT-CSCHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred HHHHHHHHH----hc-CCC-CcCHHHHHHHHHHhCCHHHHHHHHHH
Confidence 665555443 22 234 67889999999999986544555443
No 77
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.97 E-value=2.2e-30 Score=245.06 Aligned_cols=245 Identities=13% Similarity=0.116 Sum_probs=180.1
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcC--cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAG--TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
..|||+.|.+. ..+++.+.+++.+ +.. ....+|++..| .++|+++++|+.+..+...++++ +++|+|++
T Consensus 31 ~~idl~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~--v~~~~G~~ 102 (369)
T 3cq5_A 31 VDIRLNTNENP-----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDN--LWAANGSN 102 (369)
T ss_dssp CSEECSSCCCC-----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGG--EEEESHHH
T ss_pred cceeccCCCCC-----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHh--EEECCChH
Confidence 35999998642 2355667776654 321 12467876656 79999999997432222233454 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+++.+++..+.. +||+|++++|+|+.|...++..|++++.+|. + +++++|++.+++.+.+. +.+++++ ++||||
T Consensus 103 ~al~~~~~~l~~--~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~-~-~~~~~d~~~l~~~i~~~-~~~~v~~-~~~~np 176 (369)
T 3cq5_A 103 EILQQLLQAFGG--PGRTALGFQPSYSMHPILAKGTHTEFIAVSR-G-ADFRIDMDVALEEIRAK-QPDIVFV-TTPNNP 176 (369)
T ss_dssp HHHHHHHHHHCS--TTCEEEEEESSCTHHHHHHHHTTCEEEEEEC-C-TTSSCCHHHHHHHHHHH-CCSEEEE-ESSCTT
T ss_pred HHHHHHHHHhcC--CCCEEEEcCCChHHHHHHHHHcCCEEEEecC-C-cCCCCCHHHHHHHhhcc-CCCEEEE-eCCCCC
Confidence 999999887765 8999999999999999999999999999986 3 25789999999988741 2345555 899999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCC-eEEEEecccccccccccccceeEeee
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGH-LLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
||.+++.+++++|++.| ++++|+||+|.++..+ .+ ...+.+..+ +++++.||||.||++|+|+||+++
T Consensus 177 tG~~~~~~~l~~l~~~~---~~~li~De~~~~~~~~---~~---~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~-- 245 (369)
T 3cq5_A 177 TGDVTSLDDVERIINVA---PGIVIVDEAYAEFSPS---PS---ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVA-- 245 (369)
T ss_dssp TCCCCCHHHHHHHHHHC---SSEEEEECTTGGGCCS---CC---GGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEE--
T ss_pred CCCCCCHHHHHHHHHhC---CCEEEEECCchhhcCC---cc---hHHHHhhCCCCEEEEEechHhcCCcccceEEEEe--
Confidence 99999998888777654 5999999999988642 11 111212234 789999999999999999999986
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHH
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAEL 328 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~ 328 (337)
++++++++ .... ..+ +++.++|.++..+|++.+.
T Consensus 246 -~~~~~~~l----~~~~-~~~-~~~~~~~~a~~~~l~~~~~ 279 (369)
T 3cq5_A 246 -NPAFIDAV----MLVR-LPY-HLSALSQAAAIVALRHSAD 279 (369)
T ss_dssp -CTHHHHHH----HTTS-CTT-CSCHHHHHHHHHHHHTHHH
T ss_pred -CHHHHHHH----HHcC-CCC-CCCHHHHHHHHHHhcCHHH
Confidence 34444443 3322 234 4788999999999987543
No 78
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=8.8e-30 Score=237.15 Aligned_cols=236 Identities=15% Similarity=0.126 Sum_probs=175.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
...|+|+.++. + ..+++.+.+++.+... ....| |..|.++||+++++++ +. ++++ +++|+|++++
T Consensus 16 ~~~i~l~~n~~----~-~~~~~~v~~a~~~~~~-~~~~y-~~~~~~~lr~~la~~~-~~-----~~~~--i~~t~G~~~~ 80 (337)
T 3p1t_A 16 AQAVCLAFNEN----P-EAVEPRVQAAIAAAAA-RINRY-PFDAEPRVMRKLAEHF-SC-----PEDN--LMLVRGIDEC 80 (337)
T ss_dssp CCCEECSSCCC----C-SCCCHHHHHHHHHHGG-GTTSC-CTTHHHHHHHHHHHHH-TS-----CGGG--EEEESHHHHH
T ss_pred CCceEeeCCCC----C-CCCCHHHHHHHHHhhh-hhccC-CCCchHHHHHHHHHHh-Cc-----CHHH--EEEeCCHHHH
Confidence 46899998742 2 3356778888776422 24678 4578999999999997 32 2344 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+ +||+|++++|+|+.|...++..|++++.+|+. . ++++|++.+++. .+. .++++++||||||
T Consensus 81 l~~~~~~~----~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~----~~~-~~v~i~~p~nptG 149 (337)
T 3p1t_A 81 FDRISAEF----SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT-D-DLLLDPNDLAQV----SRD-DCVVLANPSNPTG 149 (337)
T ss_dssp HHHHHHHS----TTSEEEEESSSCSHHHHHHTTSCCEEEEECBC-T-TSSBCHHHHTTC----CTT-EEEEEESSCTTTC
T ss_pred HHHHHHhc----CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCC-C-CCCCCHHHHHhh----cCC-CEEEEeCCCCCCC
Confidence 99988765 79999999999999999999999999999873 2 578999888753 233 4555589999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++.+|+ +++++ +|+||+|.+|..... . .....+++++++||||.||++|+|+||+++ ++
T Consensus 150 ~~~~~~~l~~l~---~~~~~-~ivDea~~~~~~~~~-~-------~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~---~~ 214 (337)
T 3p1t_A 150 QALSAGELDQLR---QRAGK-LLIDETYVDYSSFRA-R-------GLAYGENELVFRSFSKSYGLAGLRLGALFG---PS 214 (337)
T ss_dssp CCCCHHHHHHHH---HHCSE-EEEECTTGGGSSCSS-S-------CCCCBTTEEEEEESSSTTCCTTTCCEEEEC---CH
T ss_pred CCCCHHHHHHHH---HhCCc-EEEECCChhhccccc-c-------ccccCCCEEEEeeCchhccCcchheEEEEe---CH
Confidence 999999877665 56676 556999998864211 0 011235789999999999999999999985 45
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWL 333 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~ 333 (337)
+.++.+ .... ...+++.++|.++..+|++.+..++++
T Consensus 215 ~~~~~l----~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~ 251 (337)
T 3p1t_A 215 ELIAAM----KRKQ--WFCNVGTLDLHALEAALDNDRAREAHI 251 (337)
T ss_dssp HHHHHH----HTTS--CTTCSCHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHH----Hhhc--CCCCCCHHHHHHHHHHhCCHHHHHHHH
Confidence 554444 3322 234578899999999999865434433
No 79
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.97 E-value=1.2e-28 Score=232.34 Aligned_cols=240 Identities=15% Similarity=0.121 Sum_probs=176.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCc--CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGT--ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
.+.|+|+.|.+. ..+++.+.+++.+. ... ...+|++ .+..+||+++++++ + .++++ +++|+|+
T Consensus 26 ~~~i~l~~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~lr~~la~~~-g-----~~~~~--i~~t~g~ 91 (360)
T 3hdo_A 26 ASWIKLNTNENP-----YPPSPEVVKAILEELGPDGAALRIYPS-ASSQKLREVAGELY-G-----FDPSW--IIMANGS 91 (360)
T ss_dssp TTSEECSSCCCS-----SCCCHHHHHHHHHHHTTTCGGGGSCCC-SSCHHHHHHHHHHH-T-----CCGGG--EEEESSH
T ss_pred cceeeccCCCCC-----CCCCHHHHHHHHHHHhcccchhhcCCC-CchHHHHHHHHHHh-C-----cCcce--EEEcCCH
Confidence 468999998642 44667888877664 321 1456754 47799999999998 3 22444 5789999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
++++.+++..+.. |||+|++++|+|+.|...++..|++++.+|+. + ++.+ +++++.. +.++ +++++|||
T Consensus 92 ~~al~~~~~~l~~--~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~-~~~~--~~l~~~~----~~~~-v~i~~p~n 160 (360)
T 3hdo_A 92 DEVLNNLIRAFAA--EGEEIGYVHPSYSYYGTLAEVQGARVRTFGLT-G-DFRI--AGFPERY----EGKV-FFLTTPNA 160 (360)
T ss_dssp HHHHHHHHHHHCC--TTCEEEEESSSCTHHHHHHHHHTCEEEEECBC-T-TSSB--TTCCSSB----CSSE-EEEESSCT
T ss_pred HHHHHHHHHHHhC--CCCEEEEcCCChHHHHHHHHHCCCEEEEeeCC-C-CCCH--HHHHhhc----CCCE-EEEeCCCC
Confidence 9999999988766 89999999999999999999999999999873 2 3444 4443221 2334 44489999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
|||.+++.+++.+ +|+++++++|+||+|.+|... .. .. +....++++++.||||.||++|+|+||+++
T Consensus 161 ptG~~~~~~~l~~---l~~~~~~~li~De~~~~~~~~----~~--~~-~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~-- 228 (360)
T 3hdo_A 161 PLGPSFPLEYIDE---LARRCAGMLVLDETYAEFAES----NA--LE-LVRRHENVVVTRTLSKSYSLAGMRIGLAIA-- 228 (360)
T ss_dssp TTCCCCCHHHHHH---HHHHBSSEEEEECTTGGGSSC----CC--TH-HHHHCSSEEEEEESTTTTSCTTSCCEEEEC--
T ss_pred CCCCCcCHHHHHH---HHHHCCCEEEEECChHhhCCc----ch--hH-HhccCCCEEEEecchHhhcCCccceeeEee--
Confidence 9999999987655 567889999999999987421 11 11 223346899999999999999999999985
Q ss_pred CCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHHHHHHHHh
Q 047180 288 EDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAELKKLWLK 334 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~w~~ 334 (337)
++++++.+.. .. ..+ +++.++|.++..+|++.+..++.++
T Consensus 229 -~~~~~~~~~~----~~-~~~-~~~~~~~~a~~~~l~~~~~~~~~~~ 268 (360)
T 3hdo_A 229 -RPEVIAALDK----IR-DHY-NLDRLAQAACVAALRDQAYLSECCR 268 (360)
T ss_dssp -CHHHHHHHHH----HS-CSC-CSCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred -CHHHHHHHHH----hC-CCC-CCCHHHHHHHHHHhcCHHHHHHHHH
Confidence 5666655543 22 233 5788999999999998654444443
No 80
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.96 E-value=3.8e-29 Score=234.61 Aligned_cols=230 Identities=14% Similarity=0.124 Sum_probs=172.3
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
...|||+.|.+. ..+++.+.+++.+.. ....+|++..| .+||+++++++ + .++++ +++|+|++++
T Consensus 15 ~~~id~~~~~~~-----~~~~~~v~~a~~~~~-~~~~~y~~~~~-~~lr~~la~~~-~-----~~~~~--i~~t~g~~~a 79 (350)
T 3fkd_A 15 SEIVNFSTTVWT-----DGDKDHLEKHLVENL-NCIRHYPEPDA-GTLRQMLAKRN-S-----VDNNA--ILVTNGPTAA 79 (350)
T ss_dssp -CCEECSCCSCC-----CSCCHHHHHHHHHTG-GGGGSCCCTTC-HHHHHHHHHHT-T-----CCGGG--EEEESHHHHH
T ss_pred ccEEEccCCCCC-----CCCCHHHHHHHHHhH-hHHhcCCCCcH-HHHHHHHHHHh-C-----cCHHH--EEEcCCHHHH
Confidence 578999998642 335677877776532 23467877766 89999999986 3 22444 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
+.+++..+. ||+|+++.|+|+.|...++..|++++.+|+.+. ..++++ ++.+++++ ++||||||
T Consensus 80 l~~~~~~l~----gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~----------~~~~~v~i-~~p~nptG 143 (350)
T 3fkd_A 80 FYQIAQAFR----GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNED-IGEADF----------SNMDFCWL-CNPNNPDG 143 (350)
T ss_dssp HHHHHHHTT----TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSC-GGGSCC----------TTCSEEEE-ESSCTTTC
T ss_pred HHHHHHHHC----CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCc-cccCcc----------CCCCEEEE-eCCCCCcC
Confidence 999987764 899999999999999999999999999987222 133443 23345555 89999999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
.+++.+++++|++.|+++ +||+||+|.++.++.. . ... .....++++++.||||.||++|+|+||+++ ++
T Consensus 144 ~~~~~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~--~--~~~-~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~---~~ 213 (350)
T 3fkd_A 144 RLLQRTEILRLLNDHPDT--TFVLDQSYVSFTTEEV--I--RPA-DIKGRKNLVMVYSFSHAYGIPGLRIGYIVA---NK 213 (350)
T ss_dssp CCCCHHHHHHHHHHCTTS--EEEEECTTTTSCSSCC--C--CGG-GGTTCSSEEEEEESHHHHSCGGGCCEEEEC---CH
T ss_pred CCCCHHHHHHHHHhCCCC--EEEEECchhhhccCcc--h--hhH-HhhcCCCEEEEecCchhccCcchheEeEEe---CH
Confidence 999999999999988765 9999999999875321 1 111 222346889999999999999999999985 56
Q ss_pred HHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCHH
Q 047180 291 KQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDAE 327 (337)
Q Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~ 327 (337)
++++++. ... ..+ +++.++|.++..+|++.+
T Consensus 214 ~~~~~~~----~~~-~~~-~~~~~~~~~~~~~l~~~~ 244 (350)
T 3fkd_A 214 DFMKRVA----AFS-TPW-AVNALAIEAAKFILIHPA 244 (350)
T ss_dssp HHHHHHH----TTC-CTT-CSCHHHHHHHHHHHHCTT
T ss_pred HHHHHHH----HhC-CCC-CCCHHHHHHHHHHHhCHH
Confidence 6555443 322 233 578899999999988643
No 81
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.96 E-value=2.7e-29 Score=243.10 Aligned_cols=229 Identities=15% Similarity=0.075 Sum_probs=165.1
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCC--CCCCCCC-C---CHHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTAN--MEYLPMG-G---SVKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~--~~Y~~~~-G---~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
...|+|+.|.+. ..+++.+.++..+ +..... .+|++.. | .++||+++++|+..++...+++++ +++
T Consensus 56 ~~~i~l~~g~~~-----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~--iv~ 128 (427)
T 2hox_A 56 GCSADVASGDGL-----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRY--IVF 128 (427)
T ss_dssp TCCEECCSCCCG-----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCE--EEE
T ss_pred CceEEecCcCCC-----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCE--EEE
Confidence 357999999652 3344566666654 321222 3499888 9 999999999998654443345555 589
Q ss_pred eccchhHHHHHHHHH--------hhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC
Q 047180 124 SLSGTGACRLFADFQ--------KRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN 195 (337)
Q Consensus 124 t~g~~~al~~~~~~l--------~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 195 (337)
|+|+++++.+++.++ .. |||+|++++|+|+.|...++..|++++.+ .+|++.+++.+.. +
T Consensus 129 t~G~~~al~~~~~~l~~~~~~~~~~--~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~~--------~~d~~~l~~~~~~--~ 196 (427)
T 2hox_A 129 GVGVTQLIHGLVISLSPNMTATPDA--PESKVVAHAPFYPVFREQTKYFDKKGYVW--------AGNAANYVNVSNP--E 196 (427)
T ss_dssp ESHHHHHHHHHHHHHSCCTTTCTTS--CCEEEEECSSCCHHHHHHHHHSCBTTEEE--------EEEGGGGTTCSCG--G
T ss_pred eCCHHHHHHHHHHHHhhccccccCC--CCCEEEEeCCCcccHHHHHHHcCCeeeee--------cCCHHHHHHhhcC--C
Confidence 999999999999888 55 99999999999999999999999988754 3466777765542 2
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
.+++ ++||||||||.+++ +.+ +++.+|.|++|.+ +. .++..+. .+++++++||||.||+
T Consensus 197 ~k~v-~l~~p~NPtG~~~~-~~l---------~~~~~i~d~~~~~----~~----~s~~~~~--~~~~i~~~S~SK~~g~ 255 (427)
T 2hox_A 197 QYIE-MVTSPNNPEGLLRH-AVI---------KGCKSIYDMVYYW----PH----YTPIKYK--ADEDILLFTMSKFTGH 255 (427)
T ss_dssp GEEE-EEESSCTTTCCCCC-CSS---------TTCEEEEECTTCS----TT----TSCCCSC--BCCSEEEEEHHHHTSC
T ss_pred ceEE-EEcCCCCCcccccH-HHH---------cCCCEEEeecccC----CC----CCccccC--CCceEEEEeChhcCCC
Confidence 3444 45899999999999 422 2556677776642 11 0111121 3589999999999999
Q ss_pred cccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 276 YGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+|+|+||+++ +++++++++.. +......+++.++|.++..+|++
T Consensus 256 ~G~RiG~~~~--~~~~l~~~l~~----~~~~~~~~~~~~~q~a~~~~L~~ 299 (427)
T 2hox_A 256 SGSRFGWALI--KDESVYNNLLN----YMTKNTEGTPRETQLRSLKVLKE 299 (427)
T ss_dssp GGGCCEEEEE--CCHHHHHHHHH----HHHHHTSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEE--CCHHHHHHHHH----HHHhcCCCCCHHHHHHHHHHhhc
Confidence 9999999986 46776666554 22223356889999999999986
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.94 E-value=2.3e-26 Score=219.29 Aligned_cols=241 Identities=11% Similarity=0.017 Sum_probs=170.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC--cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG--TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...+||+.|.+. ...+++.+.+++.+ +.. ....+|.+..|..++++++++++....+. + .+++|+||
T Consensus 43 ~~~idl~~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~--~v~~~~gg 112 (398)
T 3a2b_A 43 RRVLMFGSNSYL----GLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----E--AAILFSTG 112 (398)
T ss_dssp EEEEECSCSCTT----CGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----S--EEEEESSH
T ss_pred ceEEEeeccccc----CCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----C--cEEEECCH
Confidence 457899988541 13356677776654 321 12335667789888998888887543221 2 36889999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC-CeEEEEeCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN-GSFFLLHACAH 206 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~-~~~ili~~~p~ 206 (337)
++++.+++..+.. |||+|++++|+|+.|...++..|++++.+|+ +|++.+++.+.+... +..++++++||
T Consensus 113 t~a~~~~~~~~~~--~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~ 183 (398)
T 3a2b_A 113 FQSNLGPLSCLMG--RNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIF 183 (398)
T ss_dssp HHHHHHHHHHSSC--TTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBC
T ss_pred HHHHHHHHHHHhC--CCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCC
Confidence 9999999988765 8999999999999999999999999998875 578999998875321 34455568999
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCe-EEEEecccccccccccccceeEe
Q 047180 207 NPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHL-LGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 207 NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
||||.+++ +++|+++|++++++||+||+|.++.++. .. .++.......++ .++++||||.|+++| ||+++
T Consensus 184 nptG~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~--~~-~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~ 254 (398)
T 3a2b_A 184 SMEGDIVN---LPELTSIANEFDAAVMVDDAHSLGVIGH--KG-AGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAG 254 (398)
T ss_dssp TTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSG--GG-CCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEE
T ss_pred CCCCCccC---HHHHHHHHHHcCcEEEEECCCcccccCC--CC-CchHhhcCCCcCCeEEEecccccccCCC---cEEEe
Confidence 99999997 7889999999999999999998876431 11 111111111234 589999999999889 99886
Q ss_pred eeCCHHHHHHHHHHHHhhhcccccCCChhHHHH-HHHHhCC
Q 047180 286 LCEDEKQAVAVKSQLQQLARPMYSNPPVHGALI-VSTILGD 325 (337)
Q Consensus 286 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~-~~~~l~~ 325 (337)
++++++.+..... ....++.+.+.|.+ +..+|++
T Consensus 255 ---~~~~~~~l~~~~~---~~~~~~~~~~~~~a~~~~~l~~ 289 (398)
T 3a2b_A 255 ---DADVIDFLKHNAR---SVMFSASMTPASVASTLKALEI 289 (398)
T ss_dssp ---CHHHHHHHHHHCH---HHHSSBCCCHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHhcc---cceecCCCCHHHHHHHHHHHHH
Confidence 4666665543211 11233455667764 4566654
No 83
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=99.94 E-value=9.5e-26 Score=216.60 Aligned_cols=229 Identities=11% Similarity=0.019 Sum_probs=168.8
Q ss_pred eEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCCCCH---HHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 54 VNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMGGSV---KMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 54 i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~---~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
.++++|.|... ..++..+++.++.+.+ .....++|++ .|.+ +|++++++++ +. + ..++++||++
T Consensus 21 ~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~-g~-------~--~~i~~~~g~~ 88 (404)
T 1e5e_A 21 QFGAAIPPIYQ-TSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE-KT-------E--ACVATSSGMG 88 (404)
T ss_dssp TTCCSSCCCCC-CSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH-TC-------S--EEEEESSHHH
T ss_pred CCCCcCCCCcC-CCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh-CC-------C--cEEEeCChHH
Confidence 45777765432 2244555666655433 2233567877 6777 8999999987 32 1 2467888899
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACA 205 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p 205 (337)
++.+++..+.. |||+|++++|+|+.|.. .++..|++++.+++. |++.+++.+.. ++.++++++|
T Consensus 89 ai~~~~~~l~~--~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~---~t~~v~l~~p 156 (404)
T 1e5e_A 89 AIAATVLTILK--AGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKP---NTKIVYFETP 156 (404)
T ss_dssp HHHHHHHHHCC--TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCT---TEEEEEEESS
T ss_pred HHHHHHHHHhC--CCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCC---CCcEEEEECC
Confidence 99998887655 89999999999999988 788899999988762 67889888752 3455555899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHh-cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccccc-cee
Q 047180 206 HNPTGVDPSEEQWKEISYQIKA-KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCL 283 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~-~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~ 283 (337)
|||||.+++ +++|+++|++ +|+++|+||+|.++.+. . ++ .. ...+++.|+||.|+++|+|+ ||+
T Consensus 157 ~NptG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~---~---~~----~~-~~di~~~S~sK~~~~~g~ri~G~~ 222 (404)
T 1e5e_A 157 ANPTLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT---N---PV----DF-GVDVVVHSATKYINGHTDVVAGLI 222 (404)
T ss_dssp CTTTCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC---C---GG----GG-TCSEEEEETTTTTTCSSCCCCEEE
T ss_pred CCCCCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC---C---cc----cc-CCEEEEEcCccccCCCCCCeEEEE
Confidence 999999996 8899999999 99999999999988642 1 11 11 46789999999999999998 999
Q ss_pred EeeeCCHHHHHHHHHHHHhhhccc-ccCCChhHHHHHHHHhCCH
Q 047180 284 SVLCEDEKQAVAVKSQLQQLARPM-YSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~~ 326 (337)
++ +++.++ ..+....... ..+++.+.|.++...|++.
T Consensus 223 ~~---~~~~~~---~~l~~~~~~~~g~~~~~~~~~~~~~~l~~~ 260 (404)
T 1e5e_A 223 CG---KADLLQ---QIRMVGIKDITGSVISPHDAWLITRGLSTL 260 (404)
T ss_dssp EE---CHHHHH---HHHHTCCCCCCCCCCCHHHHHHHHHHHTTH
T ss_pred EE---CHHHHH---HHHHHHHHhCCCCCCCHHHHHHHHHhHhHH
Confidence 86 344433 1344433322 2457888999998888863
No 84
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.93 E-value=3.6e-24 Score=203.02 Aligned_cols=237 Identities=14% Similarity=0.031 Sum_probs=162.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cC-c-----CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AG-T-----ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~-~-----~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
...+||+.|.+ ....+++.+.+++.+. .. . ..+.|+...+..++|+++++++ +. + + .++
T Consensus 39 ~~~id~~~~~~----~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~-----~-~---~i~ 104 (384)
T 1bs0_A 39 RQYLNFSSNDY----LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL-GY-----S-R---ALL 104 (384)
T ss_dssp EEEEECSCCCT----TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH-TC-----S-E---EEE
T ss_pred ceEEEeeccCc----cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh-CC-----C-c---EEE
Confidence 45789988742 1123566777776553 21 1 1122344567889999999997 32 1 2 244
Q ss_pred eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeC
Q 047180 124 SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHA 203 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~ 203 (337)
+.+|++++.+++..+.. +||.|+++.|+|+.+...++..|++++.+|. .|++.+++.+++.+..+.+++++
T Consensus 105 ~~sGt~a~~~~~~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~ 175 (384)
T 1bs0_A 105 FISGFAANQAVIAAMMA--KEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTE 175 (384)
T ss_dssp ESCHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEE
T ss_pred eCCcHHHHHHHHHHhCC--CCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEe
Confidence 55558999888877765 8999999999999999999999999988863 47899999887543234666669
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccccccee
Q 047180 204 CAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCL 283 (337)
Q Consensus 204 ~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~ 283 (337)
+||||||.+++ +++|+++|++++++||+||+|..+.++. ........+ ... ..++++||||.||++| ||+
T Consensus 176 ~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~--~~~~~~~~~-~~~-~di~~~s~sK~~~~~G---G~~ 245 (384)
T 1bs0_A 176 GVFSMDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGE--QGRGSCWLQ-KVK-PELLVVTFGKGFGVSG---AAV 245 (384)
T ss_dssp SBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSG--GGCCHHHHT-TCC-CSEEEEESSSTTSSCC---EEE
T ss_pred CCCCCCCCccC---HHHHHHHHHHcCcEEEEECCcccceecC--CCCchHHhc-CCC-CcEEEeeccchhhccC---cEE
Confidence 99999999998 6789999999999999999998764320 011111112 122 2388999999999877 998
Q ss_pred EeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 284 SVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++ ++++++.+......... ..+++.+.|.++..+|+.
T Consensus 246 ~~---~~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~al~~ 282 (384)
T 1bs0_A 246 LC---SSTVADYLLQFARHLIY--STSMPPAQAQALRASLAV 282 (384)
T ss_dssp EE---CHHHHHHHHHHCHHHHS--SBCCCHHHHHHHHHHHHH
T ss_pred Ee---CHHHHHHHHHhchhhhc--CCCCCHHHHHHHHHHHHH
Confidence 86 46666665442111111 114677778777766653
No 85
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.91 E-value=6.7e-24 Score=201.62 Aligned_cols=239 Identities=10% Similarity=0.034 Sum_probs=155.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC-c-----CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG-T-----ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~-~-----~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
...|||+.|.+. + +..++.+.+++.+ +.. . ....|+...+..++++.+++++ +. ++ .++
T Consensus 43 ~~~id~~~~~~~---g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-~~------~~---~i~ 108 (399)
T 3tqx_A 43 KEVLNFCANNYL---G-LADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL-GT------DD---TIL 108 (399)
T ss_dssp EEEEECSSCCTT---S-CTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH-TC------SE---EEE
T ss_pred eeEEEeeccCcc---c-ccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH-CC------Cc---EEE
Confidence 457999988432 1 2345666666544 211 0 1111223334688999999987 32 12 234
Q ss_pred eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC---CeEEE
Q 047180 124 SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN---GSFFL 200 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~il 200 (337)
+++|++++.+++..+.. |||+|+++.|+|+.|...++..|.+++.+|. .|++.+++.+++... +..++
T Consensus 109 ~~sGt~a~~~~l~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v 179 (399)
T 3tqx_A 109 YSSCFDANGGLFETLLG--PEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLI 179 (399)
T ss_dssp ESCHHHHHHTTHHHHCC--TTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEE
T ss_pred ECchHHHHHHHHHHhcC--CCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEE
Confidence 45557888888777765 8999999999999999999999999998875 356777777764211 34555
Q ss_pred EeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh-cCCeEEEEecccccccccccc
Q 047180 201 LHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK-DGHLLGLAQSYAKNMGLYGQR 279 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~R 279 (337)
++++||||||.+++ +++|+++|+++|++||+||+|.....+. ....... ... .....+++.||||.|+ |++
T Consensus 180 ~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~--~~~~~~~-~~~~~~~~di~~~s~sK~~~--g~~ 251 (399)
T 3tqx_A 180 ATDGVFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGE--NGRGTPE-YCGVADRVDILTGTLGKALG--GAS 251 (399)
T ss_dssp EEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSST--TSCCHHH-HHTCTTCCSEEEEESSSSSC--SSC
T ss_pred EEeCCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCC--CCCchHH-hhCCCCCCcEEEecchHhcc--cCc
Confidence 56889999999999 7899999999999999999995322221 1111112 212 1235688999999998 445
Q ss_pred cceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 280 VGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 280 vG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
.||+++ +++.++.+........ ..+.++.+.+.++..+++.
T Consensus 252 gG~~~~---~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~ 292 (399)
T 3tqx_A 252 GGYTSG---HKEIIEWLRNRSRPYL--FSNTVAPVIVATSLKVLEL 292 (399)
T ss_dssp CEEEEE---CHHHHHHHHHHCHHHH--SSCCCCHHHHHHHHHHHHH
T ss_pred eEEEEc---CHHHHHHHHHhCccee--ccCCCcHHHHHHHHHHHHH
Confidence 599875 5666665554211111 1123555566666666653
No 86
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.91 E-value=1e-23 Score=198.49 Aligned_cols=203 Identities=13% Similarity=0.041 Sum_probs=149.0
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCc--------CCCCCCCCCCCHHHHHH-HHHHHhCCCCcccccCce
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGT--------ANMEYLPMGGSVKMVEE-TLKLAYGDNSEFIKDKRI 119 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~--------~~~~Y~~~~G~~~lr~a-ia~~~~~~~~~~~~~~~i 119 (337)
.++.++|..|... ..+++.+.+++.+. ... ...+|.+..+..+++++ +++++ +. +
T Consensus 6 ~~~~i~ld~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~-~~-------~-- 70 (371)
T 2e7j_A 6 TKDFINIDPLQTG-----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL-GC-------D-- 70 (371)
T ss_dssp --CCEECCHHHHT-----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT-TS-------S--
T ss_pred CCCcEEecccccC-----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc-CC-------C--
Confidence 3567888776431 33567788877663 221 12345567889999999 99986 32 1
Q ss_pred eEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEee--eccCCCCCCChHHHHHHHHcCC--C
Q 047180 120 AAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFH--YYHPGTKGLDFAALMDDIKNAP--N 195 (337)
Q Consensus 120 ~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~--~ 195 (337)
.+++|+|+++++.+++..+.. |||+|++++|+|+.+...++..|++++.+| . ++ ++.+|++.+++.+.+.. .
T Consensus 71 ~v~~~~g~t~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~-~~~~d~~~l~~~l~~~~~~~ 146 (371)
T 2e7j_A 71 VARVTNGAREAKFAVMHSLAK--KDAWVVMDENCHYSSYVAAERAGLNIALVPKTD-YP-DYAITPENFAQTIEETKKRG 146 (371)
T ss_dssp EEEEESSHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHHTTCEEEEECCCC-TT-TCCCCHHHHHHHHHHHTTTS
T ss_pred EEEEeCChHHHHHHHHHHHhC--CCCEEEEccCcchHHHHHHHHcCCeEEEeeccc-CC-CCCcCHHHHHHHHHhhcccC
Confidence 367899999999999988755 899999999999999999999999999998 5 32 58899999999887320 2
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
+..++++++||||||.+++. ++|+++|+++|++||+||+|..+..+ . + +..+ + ..+++.||||.++.
T Consensus 147 ~~~~v~~~~~~nptG~~~~~---~~i~~~~~~~~~~li~D~a~~~~~~~-~--~---~~~~---~-~di~~~s~sK~~~~ 213 (371)
T 2e7j_A 147 EVVLALITYPDGNYGNLPDV---KKIAKVCSEYDVPLLVNGAYAIGRMP-V--S---LKEI---G-ADFIVGSGHKSMAA 213 (371)
T ss_dssp CEEEEEEESSCTTTCCCCCH---HHHHHHHHTTTCCEEEECTTTBTTBC-C--C---HHHH---T-CSEEEEEHHHHSSC
T ss_pred CeEEEEEECCCCCCcccCCH---HHHHHHHHHcCCeEEEECccccCCCC-C--C---hhhc---C-CCEEEecCCcCCCC
Confidence 34456669999999999984 78889999999999999999876431 1 1 1112 2 34888999999985
Q ss_pred cccccceeEe
Q 047180 276 YGQRVGCLSV 285 (337)
Q Consensus 276 ~G~RvG~~~~ 285 (337)
|.|+||+++
T Consensus 214 -~~~~G~~~~ 222 (371)
T 2e7j_A 214 -SGPIGVMGM 222 (371)
T ss_dssp -CSSCEEEEE
T ss_pred -CCCcEEEEE
Confidence 459999987
No 87
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.91 E-value=3.9e-23 Score=197.58 Aligned_cols=228 Identities=9% Similarity=0.007 Sum_probs=159.7
Q ss_pred EeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCC--CCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHH
Q 047180 55 NVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYL--PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGAC 131 (337)
Q Consensus 55 ~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al 131 (337)
++++|.+... ..+...+++.+++... .....+.|. +..+..++++.+++++ +. + ..+++.+|++++
T Consensus 24 ~~~~~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~-------~--~~i~~~sG~~a~ 92 (398)
T 2rfv_A 24 TGALSTPIFQ-TSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLE-RG-------E--AGLATASGISAI 92 (398)
T ss_dssp TCCSSCCCCC-CSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHH-TC-------S--EEEEESSHHHHH
T ss_pred CCCcCCCCcC-CCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHh-CC-------C--cEEEECCHHHHH
Confidence 4677765432 2345566677665532 222234454 3345567888888876 31 1 235667777999
Q ss_pred HHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 132 RLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 132 ~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
.+++..+.. +||+|++++|+|+.+...+ +..|.+++.+++. |++.+++.+.+ +..++++++|||
T Consensus 93 ~~~l~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~---~~~~v~~~~~~n 160 (398)
T 2rfv_A 93 TTTLLTLCQ--QGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRP---ETKVVYIETPAN 160 (398)
T ss_dssp HHHHHHHCC--TTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCT---TEEEEEEESSBT
T ss_pred HHHHHHHhC--CCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCC---CCeEEEEECCCC
Confidence 998887755 8999999999999998876 7889999988751 78999988752 344555589999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccccc-ceeEee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVL 286 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~ 286 (337)
|||.+++ +++|+++|+++|+++|+||+|..+..+ . +. .. ...+++.|+||.|+.+|+|+ ||+++
T Consensus 161 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~---~---~~----~~-~~di~~~s~sK~~~~~g~~~~G~~~~- 225 (398)
T 2rfv_A 161 PTLSLVD---IETVAGIAHQQGALLVVDNTFMSPYCQ---Q---PL----QL-GADIVVHSVTKYINGHGDVIGGIIVG- 225 (398)
T ss_dssp TTTBCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC---C---GG----GG-TCSEEEEETTTTTTCSSCCCCEEEEE-
T ss_pred CCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC---C---ch----hh-CCcEEEEeCcccccCCCCceEEEEEE-
Confidence 9999997 888999999999999999999876532 1 11 11 35688999999999999999 99886
Q ss_pred eCCHHHHHHHHHHHHhhhccc-ccCCChhHHHHHHHHhCC
Q 047180 287 CEDEKQAVAVKSQLQQLARPM-YSNPPVHGALIVSTILGD 325 (337)
Q Consensus 287 ~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~q~~~~~~l~~ 325 (337)
+++.++. .+....... ..+.+.+.|.++..+|+.
T Consensus 226 --~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 260 (398)
T 2rfv_A 226 --KQEFIDQ---ARFVGLKDITGGCMSPFNAWLTLRGVKT 260 (398)
T ss_dssp --CHHHHHH---HHHTHHHHTTCCCCCHHHHHHHHHHHTT
T ss_pred --CHHHHHH---HHHHHHHhCCCCCCCHHHHHHHHhhhhh
Confidence 3444431 222222212 235677889988888876
No 88
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.91 E-value=5.9e-24 Score=204.26 Aligned_cols=246 Identities=11% Similarity=0.023 Sum_probs=163.1
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcC--CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTA--NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...+|++.|.....-| .+++.+.+++.+. .... ...|.+..|..+||+++++++.+ . .+++ +++|+||
T Consensus 41 ~~~id~~~~~~~~~lg--~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~----~~~~--v~~~~g~ 111 (426)
T 1sff_A 41 REYLDFAGGIAVLNTG--HLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPG-D----FAKK--TLLVTTG 111 (426)
T ss_dssp CEEEESSHHHHTCTTC--BTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSSC-S----SCEE--EEEESSH
T ss_pred CEEEEcccChhhcccC--CCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCCc-c----cccE--EEEeCch
Confidence 3578888775311112 2467777776653 2211 12466778899999999999733 1 1233 5789999
Q ss_pred hhHHHHHHH---HHhhhCCCCeEEEcCCCCcchH-HHHHhcCce-------------eeEeeeccC---CCCCCChHHHH
Q 047180 128 TGACRLFAD---FQKRFHPDSQIYIPVPTWSNHH-NIWRDAHVT-------------QRTFHYYHP---GTKGLDFAALM 187 (337)
Q Consensus 128 ~~al~~~~~---~l~~~~pgd~Vlv~~P~y~~y~-~~~~~~G~~-------------~~~~~~~~~---~~~~~d~~~l~ 187 (337)
++++.+++. .+.. +| +|++++|+|+.+. ..++..|.+ ++.+|+... .++.+|++.++
T Consensus 112 ~~a~~~~~~~a~~~~~--~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~ 188 (426)
T 1sff_A 112 SEAVENAVKIARAATK--RS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIH 188 (426)
T ss_dssp HHHHHHHHHHHHHHHT--CC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhC--CC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHH
Confidence 999999887 4443 55 9999999998865 466666653 556665210 12346899999
Q ss_pred HHHHcC---CCCeEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeE
Q 047180 188 DDIKNA---PNGSFFLLHACAHNPTG-VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLL 263 (337)
Q Consensus 188 ~~l~~~---~~~~~ili~~~p~NPTG-~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
+.+++. ++.++++++++||| || .+++++++++|+++|+++|++||+||+|.+|.+.. ....+ ...+ ..
T Consensus 189 ~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~---~~~~-~~ 260 (426)
T 1sff_A 189 RIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTG---TLFAM---EQMG-VA 260 (426)
T ss_dssp HHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGG---GGTT-SC
T ss_pred HHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCccc---chhhh---hhcC-CC
Confidence 888631 22346666678899 99 89999999999999999999999999999885421 11111 1111 12
Q ss_pred EEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 264 GLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 264 i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+.+.||||.||. |+|+||+++. +++++. +.........+.+.++|.++..+|+
T Consensus 261 ~di~s~sK~~~~-GlriG~~~~~---~~~~~~----l~~~~~~~~~~~~~~~~~a~~aal~ 313 (426)
T 1sff_A 261 PDLTTFAKSIAG-GFPLAGVTGR---AEVMDA----VAPGGLGGTYAGNPIACVAALEVLK 313 (426)
T ss_dssp CSEEEECGGGGT-SSCCEEEEEE---HHHHTT----SCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred CCEEEEcccccC-CCceEEEEEc---HHHHhh----hccCCcCcCCCCCHHHHHHHHHHHH
Confidence 234499999997 9999999873 343333 3221122223467888888886665
No 89
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.90 E-value=1.7e-23 Score=197.40 Aligned_cols=225 Identities=12% Similarity=-0.005 Sum_probs=155.5
Q ss_pred cccchHHHHHHHHh-cCc--C---CC--CCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh
Q 047180 68 PVVLECVREAERRI-AGT--A---NM--EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK 139 (337)
Q Consensus 68 ~~~~~~v~~a~~~~-~~~--~---~~--~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~ 139 (337)
..+++.+.+++.+. ... . .+ +|.+..|..++|+++++++ +. ++++ +++|+|+++++.+++..+.
T Consensus 11 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~-----~~~~--v~~~~g~t~a~~~~~~~~~ 82 (384)
T 1eg5_A 11 TRVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL-GV-----SPSE--IFFTSCATESINWILKTVA 82 (384)
T ss_dssp CCCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH-TS-----CGGG--EEEESCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc-CC-----CCCe--EEEECCHHHHHHHHHHhhh
Confidence 45667777776653 221 0 01 1333456789999999987 31 2344 5789999999999998776
Q ss_pred h--hCCCCeEEEcCCCCcchHHHH---HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCC
Q 047180 140 R--FHPDSQIYIPVPTWSNHHNIW---RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPS 214 (337)
Q Consensus 140 ~--~~pgd~Vlv~~P~y~~y~~~~---~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s 214 (337)
. ..+||+|++++|+|+.+...+ +..|++++.+|+. + ++.+|++.+++.+.+ +..++++++||||||.+++
T Consensus 83 ~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~ 157 (384)
T 1eg5_A 83 ETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVD-S-RGVVKLEELEKLVDE---DTFLVSIMAANNEVGTIQP 157 (384)
T ss_dssp HHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBC-T-TSCBCHHHHHHHCCT---TEEEEEEESBCTTTCBBCC
T ss_pred hhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccC-C-CCccCHHHHHHHhCC---CCeEEEEECCCCCcccccC
Confidence 1 128999999999999886655 7789999999873 3 577999999998853 3344445899999999999
Q ss_pred HHHHHHHHHHHHhcC--ceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHH
Q 047180 215 EEQWKEISYQIKAKG--HFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQ 292 (337)
Q Consensus 215 ~~~~~~l~~~~~~~~--~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~ 292 (337)
+++|+++|++++ ++||+||+|. +.. ...+ +... ...+++.||||.||++| +||+++. + +.
T Consensus 158 ---~~~i~~l~~~~~~~~~li~Dea~~-~~~--~~~~------~~~~-~~di~~~s~sK~~g~~G--~G~~~~~--~-~~ 219 (384)
T 1eg5_A 158 ---VEDVTRIVKKKNKETLVHVDAVQT-IGK--IPFS------LEKL-EVDYASFSAHKFHGPKG--VGITYIR--K-GV 219 (384)
T ss_dssp ---HHHHHHHHHHHCTTCEEEEECTTT-TTT--SCCC------CTTT-CCSEEEEEGGGGTSCTT--CEEEEEC--T-TS
T ss_pred ---HHHHHHHHHhcCCceEEEEEhhhh-cCC--cccC------chhc-CCCEEEecHHHhcCCCc--eEEEEEc--C-CC
Confidence 578889999999 9999999986 321 1001 1111 35688899999999989 7999873 2 21
Q ss_pred HHHHHHHHHhh---hcccccCCChhHHHHHHHHhCC
Q 047180 293 AVAVKSQLQQL---ARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 293 ~~~~~~~l~~~---~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++...+... ......+++.++|.++..+|+.
T Consensus 220 --~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 253 (384)
T 1eg5_A 220 --PIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI 253 (384)
T ss_dssp --CCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH
T ss_pred --ccccccccCcccccccCCCCChHHHHHHHHHHHH
Confidence 111111100 0112335788888888888875
No 90
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.90 E-value=4.7e-23 Score=196.89 Aligned_cols=208 Identities=13% Similarity=0.042 Sum_probs=152.6
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cC-c-----CCCCCCC--CCCCHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AG-T-----ANMEYLP--MGGSVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~-~-----~~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
+.++|+.|.+. ..++.+.+++.+. .. . ..+.|++ ..|..++|+++++++... ++++ ++
T Consensus 28 ~~i~l~~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~~~-----~~~~--v~ 94 (420)
T 1t3i_A 28 PLVYLDNAATS------QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFINAR-----SPRE--IV 94 (420)
T ss_dssp ECEECBTTTCC------CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGG--EE
T ss_pred ceEEecCCccC------CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcCCC-----CCCe--EE
Confidence 37899988641 3456677766553 21 1 1244654 467889999999987321 1333 57
Q ss_pred eeccchhHHHHHHHHHhh--hCCCCeEEEcCCCCcc----hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 123 QSLSGTGACRLFADFQKR--FHPDSQIYIPVPTWSN----HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~--~~pgd~Vlv~~P~y~~----y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
+|+||++|+.+++..+.+ ..+||+|++++|+|+. |...++..|++++.+|+. .++.+|++.+++++.+ +
T Consensus 95 ~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~---~ 169 (420)
T 1t3i_A 95 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSE---K 169 (420)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCT---T
T ss_pred EcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCC---C
Confidence 899999999999988721 2389999999999999 667778899999999873 3577999999998853 3
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
..++++++||||||.+++ +++|+++|+++|++||+||+|...... + + ...+ ...+++.||||.+|.+
T Consensus 170 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~~-~--~---~~~~----~~di~~~s~sK~~~~~ 236 (420)
T 1t3i_A 170 TKLVTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHYP-L--D---VQLI----DCDWLVASGHKMCAPT 236 (420)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC-C--C---HHHH----TCSEEEEEGGGTTSCT
T ss_pred ceEEEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCcc-C--c---hhhc----CCCEEEEehhhhcCCC
Confidence 445556899999999999 788999999999999999999754321 1 1 1111 2467889999999988
Q ss_pred ccccceeEeeeCCHHHHHH
Q 047180 277 GQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~ 295 (337)
| +||+++ +++++++
T Consensus 237 g--~G~~~~---~~~~~~~ 250 (420)
T 1t3i_A 237 G--IGFLYG---KEEILEA 250 (420)
T ss_dssp T--CEEEEE---CHHHHHH
T ss_pred c--eEEEEE---chHHHhh
Confidence 8 999986 4544443
No 91
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.90 E-value=6.8e-23 Score=193.64 Aligned_cols=228 Identities=15% Similarity=0.071 Sum_probs=158.7
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeE
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQI 147 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~V 147 (337)
...++.+.+|+.+. ....|++. ..++++++++++....+.. +++ .+++|+||++++.+++..+.+ +||+|
T Consensus 29 ~~~~~~v~~a~~~~---~~~~~~~~--~~~~~~~~~~~la~~~g~~-~~~--~v~~~~g~t~a~~~~~~~l~~--~gd~v 98 (386)
T 2dr1_A 29 VACFPEVLEIMKVQ---MFSHRSKE--YRKVHMDTVERLREFLEVE-KGE--VLLVPSSGTGIMEASIRNGVS--KGGKV 98 (386)
T ss_dssp CCCCHHHHHHTTSC---CCCTTSHH--HHHHHHHHHHHHHHHHTCS-SSE--EEEESSCHHHHHHHHHHHHSC--TTCEE
T ss_pred cCCcHHHHHHHhcc---cccccCHH--HHHHHHHHHHHHHHHhCCC-CCc--EEEEeCChHHHHHHHHHHhhc--CCCeE
Confidence 34566677765442 11256542 2567777777664322211 122 357899999999999987755 89999
Q ss_pred EEcCCCCcc--hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 148 YIPVPTWSN--HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 148 lv~~P~y~~--y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
++++|+|+. |...++..|++++.++.. . ++.+|++.+++.+.+.++.+++++ ++||||||.+.+ +++|+++|
T Consensus 99 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~l~~~~~~~~v~~-~~~~nptG~~~~---l~~i~~l~ 172 (386)
T 2dr1_A 99 LVTIIGAFGKRYKEVVESNGRKAVVLEYE-P-GKAVKPEDLDDALRKNPDVEAVTI-TYNETSTGVLNP---LPELAKVA 172 (386)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECC-T-TCCCCHHHHHHHHHHCTTCCEEEE-ESEETTTTEECC---HHHHHHHH
T ss_pred EEEcCCchhHHHHHHHHHhCCceEEEecC-C-CCCCCHHHHHHHHhcCCCCcEEEE-EeecCCcchhCC---HHHHHHHH
Confidence 999999998 889999999999999873 3 577999999999864233445555 689999999987 78899999
Q ss_pred HhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH-------
Q 047180 226 KAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS------- 298 (337)
Q Consensus 226 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~------- 298 (337)
+++|++||+||+|..+... . + +.. ....+++.||||.|+.++ ++||+++ ++++++++..
T Consensus 173 ~~~~~~li~D~a~~~~~~~-~--~------~~~-~~~di~~~s~sK~~~~~~-g~G~~~~---~~~~~~~~~~~~~~~~~ 238 (386)
T 2dr1_A 173 KEHDKLVFVDAVSAMGGAD-I--K------FDK-WGLDVVFSSSQKAFGVPP-GLAIGAF---SERFLEIAEKMPERGWY 238 (386)
T ss_dssp HHTTCEEEEECTTTBTTBC-C--C------TTT-TTCSEEEEETTSTTCCCS-SCEEEEE---CHHHHHHHTTCTTCCST
T ss_pred HHcCCeEEEEccccccCcc-c--c------ccc-cCCcEEEEeccccccCCC-ceEEEEE---CHHHHHHHhcCCCCceE
Confidence 9999999999999865421 1 1 111 135788999999999763 4999986 4555554421
Q ss_pred -----HHHhh--hcccccCCChhHHHHHHHHhCC
Q 047180 299 -----QLQQL--ARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 299 -----~l~~~--~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
.+... ......+++.+.|.++..+|+.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 272 (386)
T 2dr1_A 239 FDIPLYVKYLKEKESTPSTPPMPQVFGINVALRI 272 (386)
T ss_dssp TCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHH
T ss_pred EeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 11111 1123345778888888877763
No 92
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.89 E-value=2.5e-23 Score=197.60 Aligned_cols=226 Identities=11% Similarity=0.027 Sum_probs=157.9
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEE
Q 047180 69 VVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIY 148 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vl 148 (337)
.+++.+.+|+.+... ..|++. ..++++++++++....+ .+++. .+++|+||++++.+++..+.+ +||+|+
T Consensus 44 ~~~~~v~~a~~~~~~---~~~~~~--~~~~~~~~~~~la~~~g--~~~~~-~v~~t~g~t~al~~~~~~~~~--~gd~Vl 113 (393)
T 1vjo_A 44 NAHPSVLQAMNVSPV---GHLDPA--FLALMDEIQSLLRYVWQ--TENPL-TIAVSGTGTAAMEATIANAVE--PGDVVL 113 (393)
T ss_dssp CCCHHHHHHHSSCCC---CTTSHH--HHHHHHHHHHHHHHHHT--CCCSC-EEEESSCHHHHHHHHHHHHCC--TTCEEE
T ss_pred CCCHHHHHHHhcccc---cccCHH--HHHHHHHHHHHHHHHhC--CCCCc-EEEEeCchHHHHHHHHHhccC--CCCEEE
Confidence 456677776654211 246542 45677777776643222 12330 257899999999999987755 899999
Q ss_pred EcCCCCcc--hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 047180 149 IPVPTWSN--HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIK 226 (337)
Q Consensus 149 v~~P~y~~--y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~ 226 (337)
+++|+|+. |...++..|++++.+|+. . ++.+|++.+++.+.+. +.++++ +++||||||.+++ +++|+++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~l~~~-~~~~v~-~~~~~nptG~~~~---l~~i~~l~~ 186 (393)
T 1vjo_A 114 IGVAGYFGNRLVDMAGRYGADVRTISKP-W-GEVFSLEELRTALETH-RPAILA-LVHAETSTGARQP---LEGVGELCR 186 (393)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECC-T-TCCCCHHHHHHHHHHH-CCSEEE-EESEETTTTEECC---CTTHHHHHH
T ss_pred EEcCChhHHHHHHHHHHcCCceEEEecC-C-CCCCCHHHHHHHHhhC-CceEEE-EeccCCCcceecc---HHHHHHHHH
Confidence 99999999 999999999999999973 3 4679999999988742 234444 4899999999987 778999999
Q ss_pred hcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHH---HHhh
Q 047180 227 AKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQ---LQQL 303 (337)
Q Consensus 227 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~---l~~~ 303 (337)
++|++||+||+|. +.. ...+ +.. ....+++.|+||.++.+| |+||+++ +++.++++... +...
T Consensus 187 ~~~~~li~Dea~~-~g~--~~~~------~~~-~~~di~~~s~sK~l~~~~-~~G~l~~---~~~~~~~~~~~~~~~~~~ 252 (393)
T 1vjo_A 187 EFGTLLLVDTVTS-LGG--VPIF------LDA-WGVDLAYSCSQKGLGCSP-GASPFTM---SSRAIEKLQRRRTKVANW 252 (393)
T ss_dssp HHTCEEEEECTTT-TTT--SCCC------TTT-TTCSEEECCSSSTTCSCS-SCEEEEE---CHHHHHHHHTCSSCCSCS
T ss_pred HcCCEEEEECCcc-ccC--cCCc------ccc-cCccEEEEcCcccccCCC-ceEEEEE---CHHHHHHHhccCCCCCce
Confidence 9999999999998 321 1100 111 235688899999999888 9999986 45554444210 0000
Q ss_pred -------------hcccccCCChhHHHHHHHHhCC
Q 047180 304 -------------ARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 304 -------------~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
....+.+++.++|.++..+|+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~ 287 (393)
T 1vjo_A 253 YLDMNLLGKYWGSERVYHHTAPINLYYALREALRL 287 (393)
T ss_dssp TTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHH
T ss_pred ecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 0112226788888888888864
No 93
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.89 E-value=3.6e-23 Score=197.17 Aligned_cols=238 Identities=11% Similarity=0.089 Sum_probs=159.3
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cC-cCC---CCCC--CCCCCHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AG-TAN---MEYL--PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~-~~~---~~Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
+...+||+.|.+. + +..++.+.+++.+. .. ... ..|. ...+..+||+++++++ +. + + .+
T Consensus 44 g~~~id~~~~~~~---g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~-----~-~---~i 109 (401)
T 1fc4_A 44 GSHVINFCANNYL---G-LANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL-GM-----E-D---AI 109 (401)
T ss_dssp SCEEEECCCSCTT---S-CTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH-TC-----S-E---EE
T ss_pred CccEEEeeccCcc---c-ccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh-CC-----C-c---EE
Confidence 3468899988431 1 11456777766543 21 111 1232 2456789999999997 32 1 2 23
Q ss_pred eeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC---CeEE
Q 047180 123 QSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN---GSFF 199 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~---~~~i 199 (337)
++.+|++++..++..+.. +||+|+++.|+|+.+...++..|++++.++. .|++.+++.+++.+. +..+
T Consensus 110 ~~~sGs~a~~~~~~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~ 180 (401)
T 1fc4_A 110 LYSSCFDANGGLFETLLG--AEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVL 180 (401)
T ss_dssp EESCHHHHHHTTHHHHCC--TTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEE
T ss_pred EeCChHHHHHHHHHHHcC--CCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceE
Confidence 445557788887777655 8999999999999998899999999988763 478888888764211 2344
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhc-CCeEEEEecccccc-ccc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNM-GLY 276 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~-~~~ 276 (337)
+++++||||||.+++ +++|+++|+++++++|+||+|. ++...+. ... ..+... ....+++.||||.| |++
T Consensus 181 v~~~~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g-~~~---~~~~~~~~~~di~~~s~sK~~~~~~ 253 (401)
T 1fc4_A 181 IATDGVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENG-RGS---HEYCDVMGRVDIITGTLGKALGGAS 253 (401)
T ss_dssp EEEESEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTS-CCH---HHHTTCTTCCSEEEEESSSTTCSSS
T ss_pred EEEeCCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCC-Ccc---HHHcCCCcCCcEEEecchhhccCCC
Confidence 555899999999999 7889999999999999999995 8752111 111 111111 13468899999999 766
Q ss_pred ccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
| ||+++ ++++++.+........ ...+++.+.|.++..+|+.
T Consensus 254 g---G~~~~---~~~~~~~l~~~~~~~~--~~~~~~~~~~~a~~~~l~~ 294 (401)
T 1fc4_A 254 G---GYTAA---RKEVVEWLRQRSRPYL--FSNSLAPAIVAASIKVLEM 294 (401)
T ss_dssp C---EEEEE---CHHHHHHHHHHCHHHH--HSCCCCHHHHHHHHHHHHH
T ss_pred C---EEEEc---CHHHHHHHHHhCcCce--eCCCCCHHHHHHHHHHHHH
Confidence 5 99875 5666665544211111 1225677888888877763
No 94
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.89 E-value=1.7e-22 Score=188.77 Aligned_cols=212 Identities=14% Similarity=0.031 Sum_probs=146.5
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGAC 131 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al 131 (337)
..|+|+.+.. +++++.+.+++.+.... ...|++..+..+||+++++++ +. +. .++|.||++++
T Consensus 4 ~~i~~~~~~~------~~p~~~~~~a~~~~~~~-~~~y~~~~~~~~l~~~la~~~-g~-------~~--~~~~~~gt~a~ 66 (347)
T 1jg8_A 4 MMIDLRSDTV------TKPTEEMRKAMAQAEVG-DDVYGEDPTINELERLAAETF-GK-------EA--ALFVPSGTMGN 66 (347)
T ss_dssp -CEECSCGGG------CCCCHHHHHHHHTCCCC-CGGGTCCHHHHHHHHHHHHHH-TC-------SE--EEEESCHHHHH
T ss_pred eEEEeccccC------CCCCHHHHHHHhcCCCC-CcccCCChHHHHHHHHHHHHh-CC-------ce--EEEecCcHHHH
Confidence 4678887653 34567788877653211 235877778899999999987 32 11 36778888888
Q ss_pred HHHHHHHhhhCCCCeEEEcCCCCcc-hH--HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCC
Q 047180 132 RLFADFQKRFHPDSQIYIPVPTWSN-HH--NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACA 205 (337)
Q Consensus 132 ~~~~~~l~~~~pgd~Vlv~~P~y~~-y~--~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p 205 (337)
.+++..+.+ |||+|++++|+|+. |. .+++..|++++.+ . ++ ++.+|++++++++++.. .++.++++++|
T Consensus 67 ~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~-~~-~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~ 141 (347)
T 1jg8_A 67 QVSIMAHTQ--RGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-P-GK-NGAMDPDDVRKAIRPRNIHFPRTSLIAIENT 141 (347)
T ss_dssp HHHHHHHCC--TTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-C-EE-TTEECHHHHHHHSCCSCTTSCCEEEEEEESS
T ss_pred HHHHHHhcC--CCCEEEEcCcchhhhccccchhhccCeEEEEe-c-CC-CCccCHHHHHHHhccccccccCceEEEEecc
Confidence 887777655 99999999999975 43 3677789998887 3 22 45689999999886310 13455556899
Q ss_pred CCCC-CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC--CCCCccchHHHHHhhhcCCeEEEEecccccccccccccce
Q 047180 206 HNPT-GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA--SGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGC 282 (337)
Q Consensus 206 ~NPT-G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~ 282 (337)
|||| |.+++.+++++|+++|+++|++||+|++|.... +... + ...+....+ .+ +.||||.++++ +|+
T Consensus 142 ~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~--~---~~~~~~~~d-~~-~~s~sK~l~~~---~G~ 211 (347)
T 1jg8_A 142 HNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGV--P---VKEYAGYAD-SV-MFCLSKGLCAP---VGS 211 (347)
T ss_dssp BTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCC--C---HHHHHHTCS-EE-EEESSSTTCCS---SCE
T ss_pred ccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCC--C---hHHhccccc-EE-EEecccccCCC---ceE
Confidence 9999 999999999999999999999999999874211 1001 1 111222223 33 34799999853 786
Q ss_pred eEeeeCCHHHHHHHH
Q 047180 283 LSVLCEDEKQAVAVK 297 (337)
Q Consensus 283 ~~~~~~~~~~~~~~~ 297 (337)
+++ .+++.++++.
T Consensus 212 ~~~--~~~~~~~~~~ 224 (347)
T 1jg8_A 212 VVV--GDRDFIERAR 224 (347)
T ss_dssp EEE--ECHHHHHHHH
T ss_pred EEE--cCHHHHHHHH
Confidence 543 3566655543
No 95
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.89 E-value=1.2e-22 Score=191.83 Aligned_cols=242 Identities=12% Similarity=0.062 Sum_probs=157.1
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cC--cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AG--TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~--~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...+|++.|.+...- ..+++.+.+++.+. .. .....| +..+..+|++++++++ +. +++ +++|+||
T Consensus 28 ~~~ld~~~~~~~~~~--g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~-g~------~~~--v~~~~g~ 95 (375)
T 2eh6_A 28 KEYLDFVSGIGVNSL--GHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF-WT------EGK--VFFANSG 95 (375)
T ss_dssp CEEEESSHHHHTCTT--CBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS-SS------CEE--EEEESSH
T ss_pred CEEEEcCCccccccc--CCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc-CC------CCe--EEEeCch
Confidence 457899988753111 11567777776553 21 122357 4557889999999985 31 133 5789999
Q ss_pred hhHHHHHHHHHhh-h---CCC-CeEEEcCCCCcchHHHHHhcCceeeE----eeeccCCCC----CCChHHHHHHHHcCC
Q 047180 128 TGACRLFADFQKR-F---HPD-SQIYIPVPTWSNHHNIWRDAHVTQRT----FHYYHPGTK----GLDFAALMDDIKNAP 194 (337)
Q Consensus 128 ~~al~~~~~~l~~-~---~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~----~~~~~~~~~----~~d~~~l~~~l~~~~ 194 (337)
++++.+++.++.. . .|| |+|++++|+|+.+...+...+...+. .|+. . +. ..|++++++.+++
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~d~~~l~~~l~~-- 171 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLV-P-GFSYAKLNDIDSVYKLLDE-- 171 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCC-S-SEEEECTTCHHHHHTTCCT--
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCC-C-CceeCCCchHHHHHHHhcC--
Confidence 9999998864311 1 378 99999999999998766554433210 1110 0 01 1588888887752
Q ss_pred CCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc
Q 047180 195 NGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM 273 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 273 (337)
+..++++++||||||.+ .+++++++|+++|+++|+++|+||+|.+|.... ...+...+ ....+++ ||||.|
T Consensus 172 -~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~---~~~~~~~~-~~~~d~~---s~SK~~ 243 (375)
T 2eh6_A 172 -ETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTG---EFYAYQHF-NLKPDVI---ALAKGL 243 (375)
T ss_dssp -TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGGG-TCCCSEE---EECGGG
T ss_pred -CeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCC---cchhhhhc-CCCCCEE---EEcccc
Confidence 33444447799999999 679999999999999999999999999875321 10111111 1113443 899999
Q ss_pred cccccccceeEeeeCCHHHHHHHHHHHHhh-hcccccCCChhHHHHHHHHhCC
Q 047180 274 GLYGQRVGCLSVLCEDEKQAVAVKSQLQQL-ARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 274 ~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+ +|+|+||+++. ++++++ +... ....+ +.+.+.|.++..+|+.
T Consensus 244 ~-~g~~~G~~~~~---~~~~~~----~~~~~~~~~~-~~~~~~~~~~~~~l~~ 287 (375)
T 2eh6_A 244 G-GGVPIGAILAR---EEVAQS----FTPGSHGSTF-GGNPLACRAGTVVVDE 287 (375)
T ss_dssp G-TTSCCEEEEEE---HHHHTT----CCTTSCCCSS-TTCHHHHHHHHHHHHH
T ss_pred c-CCCCeEEEEEc---HHHHhh----hcCCCCCCCC-CCCHHHHHHHHHHHHH
Confidence 9 69999999863 333332 3321 12234 4577888888777765
No 96
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.89 E-value=5.3e-22 Score=192.64 Aligned_cols=222 Identities=14% Similarity=0.073 Sum_probs=154.1
Q ss_pred CCeeEeeeeeee-cCCCC--c-ccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 51 PDKVNVGVGAYR-DDNGK--P-VVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 51 ~~~i~l~~G~~~-~~~~~--~-~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
.+.++|+.|.+. |-..+ + .+.+.+.+++. .. ...|.+..|..+||+++++++ +. + .+++|.|
T Consensus 33 ~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~---~~-~~~y~~~~~~~~l~~~la~~~-~~-------~--~~~~~~~ 98 (456)
T 2ez2_A 33 YNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM---MG-DEAYAGSENFYHLERTVQELF-GF-------K--HIVPTHQ 98 (456)
T ss_dssp TCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT---TC-CCCSSSCHHHHHHHHHHHHHH-CC-------S--EEEEESS
T ss_pred CCcccCCcccceeeeccccCCccCCHHHHHHhh---cc-hhhcccChhHHHHHHHHHHHh-CC-------C--cEEEeCC
Confidence 457778877531 11111 1 22344444433 22 346887778899999999997 32 1 2578999
Q ss_pred chhHHHHHHHHHhhhCCCCeEEEcCCCC-cchHHHHHhcCceeeEeeecc---CC-----CCCCChHHHHHHHHcCC-CC
Q 047180 127 GTGACRLFADFQKRFHPDSQIYIPVPTW-SNHHNIWRDAHVTQRTFHYYH---PG-----TKGLDFAALMDDIKNAP-NG 196 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd~Vlv~~P~y-~~y~~~~~~~G~~~~~~~~~~---~~-----~~~~d~~~l~~~l~~~~-~~ 196 (337)
|++|+.+++..+.. ||| +++.|+| +.|...++..|++++.+++.. +. ++.+|++++++++++.. ..
T Consensus 99 gt~a~~~al~~l~~--~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~ 174 (456)
T 2ez2_A 99 GRGAENLLSQLAIK--PGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAEN 174 (456)
T ss_dssp HHHHHHHHHHHHCC--TTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGG
T ss_pred cHHHHHHHHHHhCC--CCC--EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccc
Confidence 99999999887754 899 8899999 888899999999999998742 11 26789999999887421 11
Q ss_pred eEEEEeCCCCC-CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC----------CCCCCCccchHHHH-HhhhcCCeEE
Q 047180 197 SFFLLHACAHN-PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG----------FASGDPERDAKAIR-IFLKDGHLLG 264 (337)
Q Consensus 197 ~~ili~~~p~N-PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~----------~~~~~~~~~~~~~~-~~~~~~~~~i 264 (337)
..++++++||| |||.+++.+++++|+++|++||++||+||+|.. +.+.+ ....++. .+ ....+++
T Consensus 175 ~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g--~~~~~~~~~~-~~~~d~~ 251 (456)
T 2ez2_A 175 IAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFEN--KSIAEIVHEM-FSYADGC 251 (456)
T ss_dssp EEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTT--SCHHHHHHHH-HTTCSEE
T ss_pred eeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCC--cchhhhhhhh-cccCCEE
Confidence 24555588999 999999999999999999999999999999975 33321 1111111 11 1223466
Q ss_pred EEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 265 LAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 265 ~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
++ |++|.++ +| |.||+++ .++++++++..
T Consensus 252 ~~-S~kk~~~-~~-~gG~~~~--~~~~~~~~~~~ 280 (456)
T 2ez2_A 252 TM-SGKKDCL-VN-IGGFLCM--NDDEMFSSAKE 280 (456)
T ss_dssp EE-ETTTTTC-CS-SCEEEEE--SCHHHHHHHHH
T ss_pred EE-eCcccCC-CC-ceeEEEE--CCHHHHHHHHH
Confidence 55 7788765 67 8999875 46776665543
No 97
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.88 E-value=4.3e-22 Score=190.66 Aligned_cols=210 Identities=14% Similarity=0.063 Sum_probs=142.5
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcC--cCCCCCC----CCCCCHHHHHHHHHHHhCCCCcccccCceeEEee
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAG--TANMEYL----PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQS 124 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~--~~~~~Y~----~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t 124 (337)
..+||+...+. ....+|.+.+++.+ +.. ....+|. ......++++.+++++ +.. . .+++
T Consensus 60 ~~ld~~s~~~l----~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~-g~~-------~--~i~~ 125 (409)
T 3kki_A 60 DDIILQSNDYL----ALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT-GFD-------E--CLLS 125 (409)
T ss_dssp TSEECCCSCTT----CCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH-TCS-------E--EEEE
T ss_pred ceEEeeccCcc----CCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh-CCC-------e--EEEe
Confidence 46777654322 12345667776654 322 1122232 2234678999999986 321 1 2445
Q ss_pred ccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCC
Q 047180 125 LSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHAC 204 (337)
Q Consensus 125 ~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~ 204 (337)
++|++++..++..+.. |||.|++++|+|+.+...++..|++++.++. .|++++++.+.+.+ .++++ +++
T Consensus 126 ~sGt~a~~~~l~~~~~--~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~-~~~vi-~~~ 194 (409)
T 3kki_A 126 QSGWNANVGLLQTICQ--PNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHG-PGIIV-VDS 194 (409)
T ss_dssp SCHHHHHHHHHHHHCC--TTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHC-SCEEE-EES
T ss_pred cchHHHHHHHHHHhcC--CCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcC-CeEEE-ECC
Confidence 6667898888877765 9999999999999999999999999887753 57999999887532 34444 489
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeE
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
||||||.+++ +++|+++|+++|++||+||+|.+..++ . ........+.-..+..+++.||||.|+++| ||++
T Consensus 195 ~~nptG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g-~-~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~ 266 (409)
T 3kki_A 195 IYSTLGTIAP---LAELVNISKEFGCALLVDESHSLGTHG-P-NGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIW 266 (409)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSS-G-GGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEE
T ss_pred CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccC-C-CCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEE
Confidence 9999999999 888999999999999999999885543 1 111111111111123588899999999763 8887
Q ss_pred eeeCCHHHHHHHH
Q 047180 285 VLCEDEKQAVAVK 297 (337)
Q Consensus 285 ~~~~~~~~~~~~~ 297 (337)
+ ++++++.+.
T Consensus 267 ~---~~~~~~~~~ 276 (409)
T 3kki_A 267 C---NNEVNRCVP 276 (409)
T ss_dssp E---SSSGGGTHH
T ss_pred E---CHHHHHHHH
Confidence 5 344444443
No 98
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.88 E-value=3.2e-22 Score=190.80 Aligned_cols=240 Identities=13% Similarity=0.054 Sum_probs=152.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCc--CCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGT--ANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...+|++.|...+.-+ ..+|.+.+++.+ +... ....| +.....++++.+++++ + .+ .+++|+||
T Consensus 39 ~~~lD~~~~~~~~~lg--~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-~-------~~--~v~~~~gg 105 (406)
T 4adb_A 39 KEYIDFAGGIAVNALG--HAHPELREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT-F-------AD--RVFFCNSG 105 (406)
T ss_dssp CEEEESSHHHHTCTTC--BTCHHHHHHHHHHHTTCSCCCTTS-CCHHHHHHHHHHHHHS-S-------CS--EEEEESSH
T ss_pred CEEEECCCchhhcccC--CCCHHHHHHHHHHHHhcccccCCc-CCHHHHHHHHHHHhhC-C-------CC--eEEEeCcH
Confidence 4578888874321122 245677777655 3221 11123 2223455666666654 2 12 36789999
Q ss_pred hhHHHHHHHHHhhh------CCCCeEEEcCCCCcchHHHHHhcCceeeE----eeeccCCCC----CCChHHHHHHHHcC
Q 047180 128 TGACRLFADFQKRF------HPDSQIYIPVPTWSNHHNIWRDAHVTQRT----FHYYHPGTK----GLDFAALMDDIKNA 193 (337)
Q Consensus 128 ~~al~~~~~~l~~~------~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~----~~~~~~~~~----~~d~~~l~~~l~~~ 193 (337)
++|+.+++.++... ..+|+|++++|+|+.+...+...+...+. .+. .. +. ..|++.+++.+.
T Consensus 106 ~~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~d~~~l~~~l~-- 181 (406)
T 4adb_A 106 AEANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPL-PA-DIRHAAYNDINSASALID-- 181 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSC-CS-SEEEECTTCHHHHHTTCS--
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCC-CC-CceEeCCCcHHHHHHHhc--
Confidence 99999998776432 13499999999999997666555543211 010 00 11 137888887775
Q ss_pred CCCeEEEEeCCCCCCCCCCC--CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccc
Q 047180 194 PNGSFFLLHACAHNPTGVDP--SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAK 271 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~~~--s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 271 (337)
.+..+++++ |+||||.++ +.+++++|+++|++||++||+||+|.+|.+.. ...+...+ ....+++ ||||
T Consensus 182 -~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~~-~~~~d~~---t~sK 252 (406)
T 4adb_A 182 -DSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTG---ELYAYMHY-GVTPDLL---TTAK 252 (406)
T ss_dssp -TTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHHH-TCCCSEE---EECG
T ss_pred -CCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---hhHHHHhc-CCCCCEE---Eech
Confidence 234555545 999999999 99999999999999999999999999875421 11112211 2233444 6799
Q ss_pred cccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 272 NMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 272 ~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.|+ +|+|+||+++ ++++++ .+.........+.+.++|.++..+|+
T Consensus 253 ~~~-~G~r~G~~~~---~~~~~~----~~~~~~~~~~~~~~~~~~~a~~~~l~ 297 (406)
T 4adb_A 253 ALG-GGFPVGALLA---TEECAR----VMTVGTHGTTYGGNPLASAVAGKVLE 297 (406)
T ss_dssp GGG-TTSCCEEEEE---CHHHHH----TCCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred hhc-CCCCeEEEEE---cHHHHh----hhccCCcCCCCCCCHHHHHHHHHHHH
Confidence 999 9999999875 444433 33333223333577888988887775
No 99
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.88 E-value=1.3e-21 Score=185.84 Aligned_cols=208 Identities=15% Similarity=0.042 Sum_probs=149.1
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCc--CCC------CCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGT--ANM------EYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~--~~~------~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
+.++|..|.+ ...++.+.+++.+. ... ..+ +|.+..+..++|+++++++... ++++ ++
T Consensus 23 ~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~-----~~~~--v~ 89 (406)
T 1kmj_A 23 PLAYLDSAAS------AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFINAR-----SAEE--LV 89 (406)
T ss_dssp ECEECCTTTC------CCCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTTCS-----CGGG--EE
T ss_pred ceEEecCCcc------CCCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcCCC-----CCCe--EE
Confidence 4688887753 12456677666543 211 111 1334567889999999987321 1333 57
Q ss_pred eeccchhHHHHHHHHHhh--hCCCCeEEEcCCCCcch----HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 123 QSLSGTGACRLFADFQKR--FHPDSQIYIPVPTWSNH----HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~--~~pgd~Vlv~~P~y~~y----~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
+|+|+++++.+++..+.. ..+||+|++++|+|+.. ...++..|++++.+|+. . ++.+|++.+++.+.+ +
T Consensus 90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~-~~~~d~~~l~~~l~~---~ 164 (406)
T 1kmj_A 90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLN-P-DGTLQLETLPTLFDE---K 164 (406)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBC-T-TSCBCGGGHHHHCCT---T
T ss_pred EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecC-C-CCCcCHHHHHHHhcc---C
Confidence 899999999999988721 23899999999998753 45567789999999873 2 577899999998852 3
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
..++++++||||||.+++ +++|+++|++++++||+||+|...... + + +. .. ...+++.||||.||++
T Consensus 165 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~~-~--~---~~---~~-~~d~~~~s~~K~~g~~ 231 (406)
T 1kmj_A 165 TRLLAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHHP-V--D---VQ---AL-DCDFYVFSGHKLYGPT 231 (406)
T ss_dssp EEEEEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC-C--C---HH---HH-TCSEEEEEGGGTTSCT
T ss_pred CeEEEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCCC-C--c---cc---cc-CCCEEEEEchhccCCC
Confidence 445556899999999999 788999999999999999999764321 1 1 11 11 3568889999999988
Q ss_pred ccccceeEeeeCCHHHHHH
Q 047180 277 GQRVGCLSVLCEDEKQAVA 295 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~ 295 (337)
| +||+++ +++++++
T Consensus 232 G--~G~~~~---~~~~~~~ 245 (406)
T 1kmj_A 232 G--IGILYV---KEALLQE 245 (406)
T ss_dssp T--CEEEEE---CHHHHHH
T ss_pred C--cEEEEE---eHHHHhh
Confidence 8 899986 3554443
No 100
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.88 E-value=1e-22 Score=190.44 Aligned_cols=219 Identities=12% Similarity=0.028 Sum_probs=151.3
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
+..++|..+. ...+++.+.+++.+.. ..|.+..|..++++++++++....+ .++++ +++|+||+++
T Consensus 13 p~~i~l~~~~------~~~~~~~v~~a~~~~~----~~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~--v~~~~g~t~a 78 (359)
T 1svv_A 13 PKPYSFVNDY------SVGMHPKILDLMARDN----MTQHAGYGQDSHCAKAARLIGELLE--RPDAD--VHFISGGTQT 78 (359)
T ss_dssp --CEECSCSC------SSCCCHHHHHHHHHHT----TCCCCSTTCSHHHHHHHHHHHHHHT--CTTSE--EEEESCHHHH
T ss_pred CeeEEecCCC------cCCCCHHHHHHHHHHH----hhccccccccHHHHHHHHHHHHHhC--CCCcc--EEEeCCchHH
Confidence 4578887643 2345677888776641 2476677888899998888744322 22333 5789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHH--HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC----CCeEEEEeCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHN--IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP----NGSFFLLHAC 204 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~--~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~----~~~~ili~~~ 204 (337)
+.+++..+.. +||+|++++|+|+.+.. .++..|.+++.+|. + ++.+|++.+++.+++.+ .+..++++++
T Consensus 79 ~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~ 153 (359)
T 1svv_A 79 NLIACSLALR--PWEAVIATQLGHISTHETGAIEATGHKVVTAPC-P--DGKLRVADIESALHENRSEHMVIPKLVYISN 153 (359)
T ss_dssp HHHHHHHHCC--TTEEEEEETTSHHHHSSTTHHHHTTCCEEEECC-T--TSCCCHHHHHHHHHHSCSTTSCEEEEEEEES
T ss_pred HHHHHHHHhC--CCCEEEEcccchHHHHHHHHHhcCCCeeEEEeC-C--CCeecHHHHHHHHHHHHhccCCCceEEEEEc
Confidence 9999988765 89999999999999987 58889999999986 3 58899999999987531 1134444467
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeE
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
| ||||.+++.+++++|+++|+++|+++|+||+|.+|..+....+...+. +... .-+++.|++|..+. ..+|+++
T Consensus 154 ~-~ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~--~d~~~~s~~K~g~~--~~~g~l~ 227 (359)
T 1svv_A 154 T-TEVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLAD-IARL--TDMFYIGATKAGGM--FGEALII 227 (359)
T ss_dssp S-CTTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHH-HHHH--CSEEEEECTTTTCS--SCEEEEE
T ss_pred C-CCCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhh-hhhc--CCEEEEecccCCCC--CceEEEE
Confidence 8 899999999999999999999999999999995543211100100110 0011 12456678886442 4567776
Q ss_pred eeeCCHHHHHHHH
Q 047180 285 VLCEDEKQAVAVK 297 (337)
Q Consensus 285 ~~~~~~~~~~~~~ 297 (337)
+ ++++++++.
T Consensus 228 ~---~~~~~~~~~ 237 (359)
T 1svv_A 228 L---NDALKPNAR 237 (359)
T ss_dssp C---SGGGCTTHH
T ss_pred E---cccHHHHHH
Confidence 4 455544444
No 101
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.87 E-value=5.6e-22 Score=193.71 Aligned_cols=229 Identities=14% Similarity=0.042 Sum_probs=156.2
Q ss_pred CeeEeeee-eeecCCCCcccchHHHHHHHH----hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 52 DKVNVGVG-AYRDDNGKPVVLECVREAERR----IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 52 ~~i~l~~G-~~~~~~~~~~~~~~v~~a~~~----~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
+.|+|+.| .+ ...+++.+.++... ......+.|+ ..|.+ +++++++++....+. + ..+++.+
T Consensus 90 ~~i~l~~g~~~-----~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~--~~i~~~s 156 (464)
T 1ibj_A 90 LLVNLDNKFDP-----FDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----D--RAFCFTS 156 (464)
T ss_dssp HHTCCCCSSCT-----TCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----S--EEEEESS
T ss_pred eEEECCCCCCC-----CCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----C--eEEEECC
Confidence 46778776 32 12233444443322 1122346686 45776 777877776443222 2 2467788
Q ss_pred chhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----HHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEe
Q 047180 127 GTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLH 202 (337)
Q Consensus 127 ~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~ 202 (337)
|++++.+++. +.. |||+|++++|+|+.|... ++..|++++.+++. |++++++++. .+..++++
T Consensus 157 Gt~al~~~l~-~~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~---~~tk~v~l 223 (464)
T 1ibj_A 157 GMAALSAVTH-LIK--NGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIG---PQTKLVWL 223 (464)
T ss_dssp HHHHHHHHHT-TSC--TTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCC---SSEEEEEE
T ss_pred HHHHHHHHHH-HhC--CCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhc---cCceEEEE
Confidence 8889887765 333 899999999999999764 46689999888751 7899998885 23455556
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc-cccccc
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL-YGQRVG 281 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~-~G~RvG 281 (337)
++||||||.+++ +++|+++|+++|+++|+||+|..... .. ++. ....+++.|+||.|+. +|+|+|
T Consensus 224 ~~p~NptG~v~~---l~~i~~la~~~gi~livDea~~~g~~---~~---~~~-----~~~div~~S~sK~~~g~~Gl~~G 289 (464)
T 1ibj_A 224 ESPTNPRQQISD---IRKISEMAHAQGALVLVDNSIMSPVL---SR---PLE-----LGADIVMHSATKFIAGHSDVMAG 289 (464)
T ss_dssp CSSCTTTCCCCC---HHHHHHHHHTTTCEEEEECTTTCTTT---CC---GGG-----TTCSEEEEETTTTTTCSSCCCCE
T ss_pred eCCCCCCCEeec---HHHHHHHHHHcCCEEEEECCCccccc---CC---hhh-----cCCEEEEECCcccccCCCCCcEE
Confidence 999999999995 78899999999999999999975321 00 111 1367899999999874 499999
Q ss_pred eeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCCH
Q 047180 282 CLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGDA 326 (337)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~ 326 (337)
|+++ +++++++++.. .....-.+.+.+.|.++...|++.
T Consensus 290 ~l~~--~~~~l~~~l~~----~~~~~g~~~~~~~~~a~~~al~~~ 328 (464)
T 1ibj_A 290 VLAV--KGEKLAKEVYF----LQNSEGSGLAPFDCWLCLRGIKTM 328 (464)
T ss_dssp EEEE--CSHHHHHHHHH----HHHHTTCBCCHHHHHHHHHHHTTH
T ss_pred EEEE--ChHHHHHHHHH----HHHhcCCCCCHHHHHHHHhchhhH
Confidence 9986 44566555543 221122346778888888888763
No 102
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.87 E-value=2.3e-21 Score=184.78 Aligned_cols=224 Identities=15% Similarity=0.053 Sum_probs=146.4
Q ss_pred cchHHHHHHHHh-c--CcC----CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhC
Q 047180 70 VLECVREAERRI-A--GTA----NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFH 142 (337)
Q Consensus 70 ~~~~v~~a~~~~-~--~~~----~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~ 142 (337)
.+|.+.+++.+. . ... ...|+...+..++|+++++|+ +. ++. ++.|.|++ +...++.++....
T Consensus 61 ~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-~~------~~~--i~~~sG~~-a~~~~~~~l~~~~ 130 (401)
T 2bwn_A 61 QHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH-QK------EAA--LVFSSAYN-ANDATLSTLRVLF 130 (401)
T ss_dssp GCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT-TC------SEE--EEESCHHH-HHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHh-CC------CcE--EEECCcHH-HHHHHHHHHhcCC
Confidence 345677766543 2 111 123555567889999999987 31 222 45566655 6555555543334
Q ss_pred CCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC-CCeEEEEeCCCCCCCCCCCCHHHHHHH
Q 047180 143 PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP-NGSFFLLHACAHNPTGVDPSEEQWKEI 221 (337)
Q Consensus 143 pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~ili~~~p~NPTG~~~s~~~~~~l 221 (337)
|||+|+++.|+|+.+...++..|++++.+|. + |++.+++.++... .+..++++++||||||.+++ +++|
T Consensus 131 ~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~-~------d~~~le~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i 200 (401)
T 2bwn_A 131 PGLIIYSDSLNHASMIEGIKRNAGPKRIFRH-N------DVAHLRELIAADDPAAPKLIAFESVYSMDGDFGP---IKEI 200 (401)
T ss_dssp TTCEEEEETTCCHHHHHHHHHSCCCEEEECT-T------CHHHHHHHHHHSCTTSCEEEEEESBCTTTCCBCC---HHHH
T ss_pred CCCEEEECchhhHHHHHHHHHcCCeEEEEcC-C------CHHHHHHHHHhhccCCceEEEEecCcCCCCCcCC---HHHH
Confidence 8999999999999999999999999998875 1 6888888876432 23445566899999999998 7889
Q ss_pred HHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHH
Q 047180 222 SYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQL 300 (337)
Q Consensus 222 ~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l 300 (337)
+++|+++++++|+||+|....++...... .. .... ....++++||||.||++| ||+++ ++++++.+...-
T Consensus 201 ~~l~~~~~~~li~Dea~~~g~~~~~g~~~--~~-~~~~~~~~~i~~~s~sK~~~~~G---G~~~~---~~~~~~~l~~~~ 271 (401)
T 2bwn_A 201 CDIAEEFGALTYIDEVHAVGMYGPRGAGV--AE-RDGLMHRIDIFNGTLAKAYGVFG---GYIAA---SARMVDAVRSYA 271 (401)
T ss_dssp HHHHHHHTCEEEEECTTTTTTSSTTSCCH--HH-HHTCGGGCSEEEEESSSTTCSCC---EEEEE---CHHHHHHHHHHC
T ss_pred HHHHHHcCCEEEEeccccccccCCCCcee--ee-ccCccccCcEEEeechhhccCCC---CEEec---CHHHHHHHHHhC
Confidence 99999999999999999854332110111 11 1111 124688899999999988 99875 466555544311
Q ss_pred HhhhcccccCCChhHHHHHHHHhC
Q 047180 301 QQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 301 ~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
... ... .+.+.++|.++..+++
T Consensus 272 ~~~-~~~-~~~~~~~~~a~~~al~ 293 (401)
T 2bwn_A 272 PGF-IFS-TSLPPAIAAGAQASIA 293 (401)
T ss_dssp HHH-HTS-BCCCHHHHHHHHHHHH
T ss_pred cCc-eec-CCCCHHHHHHHHHHHH
Confidence 111 111 1234466765555554
No 103
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.87 E-value=1e-21 Score=189.42 Aligned_cols=204 Identities=13% Similarity=0.093 Sum_probs=144.8
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC-c-CCCCCCCCCCC----HHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG-T-ANMEYLPMGGS----VKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~-~-~~~~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
...|||+.|.+. + ...++.+.+++.+ +.. . ...+|....|. .+|++.+++++ +. + . .++
T Consensus 64 ~~~id~~~~~~l---g-~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~-g~------~-~--~i~ 129 (427)
T 2w8t_A 64 KDTILLGTYNYM---G-MTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY-GT------T-G--AIV 129 (427)
T ss_dssp EEEEECSCCCTT---C-GGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH-TC------S-E--EEE
T ss_pred ceEEEEECcccc---c-CCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh-CC------C-c--eEE
Confidence 357899888431 1 2355667766654 321 1 12234444554 78999999987 32 1 1 356
Q ss_pred eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCC-CeEEEEe
Q 047180 124 SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPN-GSFFLLH 202 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~-~~~ili~ 202 (337)
+++|++++..++.++.. +||.|+++.|+|+.+...++..|++++.++. .|++.+++.+.+... +..+|++
T Consensus 130 ~~sGs~a~~~al~~l~~--~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~ 200 (427)
T 2w8t_A 130 FSTGYMANLGIISTLAG--KGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVL 200 (427)
T ss_dssp ESCHHHHHHHHHHHHSC--TTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEE
T ss_pred ecCcHHHHHHHHHHhcC--CCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEE
Confidence 66777788887777655 8999999999999999999999999988763 589999998875322 3455555
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccce
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGC 282 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~ 282 (337)
++++||||.+++ +++|+++|+++|+++|+||+|..+.++. ........+.-..+..+++.||||.||++| ||
T Consensus 201 ~~~~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~--~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~ 272 (427)
T 2w8t_A 201 EGVYSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGP--NGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GF 272 (427)
T ss_dssp ESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSST--TSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EE
T ss_pred cCCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCC--CCCchHhhcCCCcCCcEEEecchhhhccCC---CE
Confidence 889999999998 7889999999999999999999876531 111111111111234788999999999877 99
Q ss_pred eEe
Q 047180 283 LSV 285 (337)
Q Consensus 283 ~~~ 285 (337)
+++
T Consensus 273 v~~ 275 (427)
T 2w8t_A 273 VVS 275 (427)
T ss_dssp EEE
T ss_pred EEe
Confidence 986
No 104
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.87 E-value=6.7e-23 Score=193.95 Aligned_cols=201 Identities=13% Similarity=-0.020 Sum_probs=143.2
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCc---CCC---CCCC-CCCCHHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGT---ANM---EYLP-MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~---~~~---~Y~~-~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
+.++|..+.+ ...++.+.+++.+. ... ... .|.. ..+..++|+++++++ +. ++++ +++
T Consensus 16 ~~i~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~-g~-----~~~~--v~~ 81 (390)
T 1elu_A 16 NKTYFNFGGQ------GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF-NV-----DPNT--ITI 81 (390)
T ss_dssp TSEECCTTTC------CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT-TS-----CGGG--EEE
T ss_pred CeEEecCCcc------CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc-CC-----CHHH--EEE
Confidence 4677776632 22345676666543 211 111 3543 367889999999986 32 2334 578
Q ss_pred eccchhHHHHHHHHH-hhhCCCCeEEEcCCCCcchHHH----HHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeE
Q 047180 124 SLSGTGACRLFADFQ-KRFHPDSQIYIPVPTWSNHHNI----WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 124 t~g~~~al~~~~~~l-~~~~pgd~Vlv~~P~y~~y~~~----~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
|+||++++.+++..+ .. +||+|++++|+|+.+... ++..|++++.+|+..+.++.+|++.+++.+.+ +..
T Consensus 82 ~~g~t~a~~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~---~~~ 156 (390)
T 1elu_A 82 TDNVTTGCDIVLWGLDWH--QGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGP---KTR 156 (390)
T ss_dssp ESSHHHHHHHHHHHSCCC--TTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCT---TEE
T ss_pred eCChHHHHHHHHhCCCCC--CCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCC---Cce
Confidence 999999999999887 44 899999999999998754 46789999999874323578899999887752 344
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHH----hcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 199 FLLHACAHNPTGVDPSEEQWKEISYQIK----AKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~~~~~~l~~~~~----~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
++++++||||||.+++ +++|+++|+ ++|+++|+||+|...... . + +.. ....+++.|+||.+.
T Consensus 157 ~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~-~--~------~~~-~~~d~~~~s~~K~~~ 223 (390)
T 1elu_A 157 LVILSHLLWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGSLP-L--D------FSR-LEVDYYAFTGHKWFA 223 (390)
T ss_dssp EEEEESBCTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTTBC-C--C------TTT-SCCSEEEEESSSTTC
T ss_pred EEEEeccccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCCcC-C--C------hhh-cCCCEEEcccccccc
Confidence 5556899999999999 778889999 999999999999732110 0 0 111 134688899999332
Q ss_pred ccccccceeEe
Q 047180 275 LYGQRVGCLSV 285 (337)
Q Consensus 275 ~~G~RvG~~~~ 285 (337)
+|.|+||+++
T Consensus 224 -~~~g~G~~~~ 233 (390)
T 1elu_A 224 -GPAGVGGLYI 233 (390)
T ss_dssp -CCTTCEEEEE
T ss_pred -CCCceEEEEE
Confidence 4677999987
No 105
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.87 E-value=5.3e-22 Score=187.61 Aligned_cols=207 Identities=14% Similarity=0.012 Sum_probs=139.6
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-------
Q 047180 69 VVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF------- 141 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~------- 141 (337)
.+++.+.+++.+........|....|..++++.+.+++....+ .++++ +++|+||++++.+++..+...
T Consensus 41 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~--i~~~~ggt~a~~~~~~~~~~~~~~~~~~ 116 (397)
T 3f9t_A 41 NVLPITRKIVDIFLETNLGDPGLFKGTKLLEEKAVALLGSLLN--NKDAY--GHIVSGGTEANLMALRCIKNIWREKRRK 116 (397)
T ss_dssp CCCTHHHHHHHHHTTCCTTSGGGBHHHHHHHHHHHHHHHHHTT--CTTCE--EEEESCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhC--CCCCC--EEEecCcHHHHHHHHHHHHHHHHhhhhh
Confidence 3456677776553111111222112445555555555432222 12333 578999999999998877661
Q ss_pred ----CCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHH
Q 047180 142 ----HPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQ 217 (337)
Q Consensus 142 ----~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~ 217 (337)
.+||+|++++|+|+.|...++..|++++.+|+. + ++.+|++.+++.+.+. +.+++++ ++||||||.+.+
T Consensus 117 ~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~~-~~~~v~~-~~~~nptG~~~~--- 189 (397)
T 3f9t_A 117 GLSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIK-E-DYTIDEKFVKDAVEDY-DVDGIIG-IAGTTELGTIDN--- 189 (397)
T ss_dssp TCCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBC-T-TSSBCHHHHHHHHHHS-CCCEEEE-EBSCTTTCCBCC---
T ss_pred cccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeC-C-CCcCCHHHHHHHHhhc-CCeEEEE-ECCCCCCCCCCC---
Confidence 139999999999999999999999999999983 3 5789999999998752 2334444 779999999986
Q ss_pred HHHHHHHHHhcCceeEEcccCCCCCCCCCccchHH------HHHhhhcCCeEEEEecccccccccccccceeEeeeCCHH
Q 047180 218 WKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKA------IRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEK 291 (337)
Q Consensus 218 ~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~------~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~ 291 (337)
+++|+++|+++|++||+||+|.++..+ +...... ...+.. ...+++.|++|.++ +|+|+|++++ +++.
T Consensus 190 l~~i~~l~~~~~~~li~Dea~~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~~~s~~K~~~-~~~~~g~~~~--~~~~ 263 (397)
T 3f9t_A 190 IEELSKIAKENNIYIHVDAAFGGLVIP-FLDDKYKKKGVNYKFDFSL--GVDSITIDPHKMGH-CPIPSGGILF--KDIG 263 (397)
T ss_dssp HHHHHHHHHHHTCEEEEECTTGGGTGG-GCCGGGCCTTCCCCCSGGG--TCSEEECCTTTTTC-CCSSCEEEEE--SSGG
T ss_pred HHHHHHHHHHhCCeEEEEccccchhhh-hcccccccccccccccccc--cCCeEEEccccccC-CCCCceEEEE--eCHH
Confidence 777999999999999999999876431 1000000 000111 23577789999776 6889999986 4444
Q ss_pred H
Q 047180 292 Q 292 (337)
Q Consensus 292 ~ 292 (337)
.
T Consensus 264 ~ 264 (397)
T 3f9t_A 264 Y 264 (397)
T ss_dssp G
T ss_pred H
Confidence 3
No 106
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.87 E-value=1.2e-21 Score=188.66 Aligned_cols=201 Identities=17% Similarity=0.105 Sum_probs=150.1
Q ss_pred EeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCC-CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHH
Q 047180 55 NVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLP-MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACR 132 (337)
Q Consensus 55 ~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~-~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~ 132 (337)
+|+.|.+. ..+++.+.+++.+. .. ..|++ ..|..+||+++++|+ +. + .+++|+||++++.
T Consensus 20 ~l~~~~p~-----~~~p~~~~~a~~~~~~~---~~y~~~~~~~~~l~~~la~~~-~~-------~--~v~~~~ggt~al~ 81 (424)
T 2po3_A 20 PLLVGRPN-----RIDRARLYERLDRALDS---QWLSNGGPLVREFEERVAGLA-GV-------R--HAVATCNATAGLQ 81 (424)
T ss_dssp CEETTCCC-----CCCHHHHHHHHHHHHHH---TCCSSSCHHHHHHHHHHHHHH-TS-------S--EEEEESCHHHHHH
T ss_pred cccccCCC-----CCChHHHHHHHHHHHhc---CCcccCCHHHHHHHHHHHHHh-CC-------C--eEEEeCCHHHHHH
Confidence 57777542 33456677776553 22 14776 678899999999997 32 2 2589999999999
Q ss_pred HHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCC
Q 047180 133 LFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVD 212 (337)
Q Consensus 133 ~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~ 212 (337)
+++..+. +||+|++++|+|+.|...++..|++++.+++. ++++.+|++++++.+.+ +.+++++ + ||||..
T Consensus 82 ~~l~~l~---~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~--~~~~v~~-~---~~tG~~ 151 (424)
T 2po3_A 82 LLAHAAG---LTGEVIMPSMTFAATPHALRWIGLTPVFADID-PDTGNLDPDQVAAAVTP--RTSAVVG-V---HLWGRP 151 (424)
T ss_dssp HHHHHHT---CCSEEEEESSSCTHHHHHHHHTTCEEEEECBC-TTTSSBCHHHHGGGCCT--TEEEEEE-E---CGGGCC
T ss_pred HHHHHcC---CCCEEEECCCccHHHHHHHHHcCCEEEEEecC-CCcCCcCHHHHHHhhCc--CCcEEEE-E---CCCCCc
Confidence 9998774 78999999999999999999999999999984 34678899999887752 3334444 3 499987
Q ss_pred CCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHH
Q 047180 213 PSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEK 291 (337)
Q Consensus 213 ~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~ 291 (337)
.++++|+++|++++++||+||+|. ++.++ . . + +.... + +++.||||.++++|+|+||++. ++++
T Consensus 152 ---~~l~~i~~la~~~~~~li~Dea~~~g~~~~-~-~---~---~~~~~-d-i~~~S~sk~K~l~~~~~G~~v~--~~~~ 216 (424)
T 2po3_A 152 ---CAADQLRKVADEHGLRLYFDAAHALGCAVD-G-R---P---AGSLG-D-AEVFSFHATKAVNAFEGGAVVT--DDAD 216 (424)
T ss_dssp ---CCHHHHHHHHHHTTCEEEEECTTCTTCEET-T-E---E---TTSSS-S-EEEEECCTTSSSCCSSCEEEEE--SCHH
T ss_pred ---CCHHHHHHHHHHcCCEEEEECccccCCeEC-C-e---e---ccccc-C-EEEEeCCCCCCccCCCCeEEEe--CCHH
Confidence 467889999999999999999998 46432 1 1 1 11112 3 8889999888888899999886 4577
Q ss_pred HHHHHHH
Q 047180 292 QAVAVKS 298 (337)
Q Consensus 292 ~~~~~~~ 298 (337)
+++++..
T Consensus 217 l~~~l~~ 223 (424)
T 2po3_A 217 LAARIRA 223 (424)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7666654
No 107
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.87 E-value=4.1e-22 Score=189.91 Aligned_cols=235 Identities=11% Similarity=0.059 Sum_probs=150.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCC--CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTAN--MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...+|++.|...+.-+ + .++.+.+++.+. ..... ..| +.....++++.+++++ + .++ ++.|+||
T Consensus 40 ~~~ld~~~~~~~~~lg-~-~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~--v~~~~gg 106 (397)
T 2ord_A 40 NAYLDFTSGIAVNVLG-H-SHPRLVEAIKDQAEKLIHCSNLF-WNRPQMELAELLSKNT-F-------GGK--VFFANTG 106 (397)
T ss_dssp CEEEESSHHHHTCTTC-B-TCHHHHHHHHHHHHHCSCCCTTS-EEHHHHHHHHHHHHTT-T-------SCE--EEEESSH
T ss_pred CEEEECCccccccccC-C-CCHHHHHHHHHHHHhcccCcccc-CCHHHHHHHHHHHHhc-C-------CCe--EEEeCCH
Confidence 3467887773211112 1 456677766553 21111 123 2223345666666654 2 133 5789999
Q ss_pred hhHHHHHHHHHhhhC----C-CCeEEEcCCCCcch-HHHHHhcCce------------eeEeeeccCCCCCCChHHHHHH
Q 047180 128 TGACRLFADFQKRFH----P-DSQIYIPVPTWSNH-HNIWRDAHVT------------QRTFHYYHPGTKGLDFAALMDD 189 (337)
Q Consensus 128 ~~al~~~~~~l~~~~----p-gd~Vlv~~P~y~~y-~~~~~~~G~~------------~~~~~~~~~~~~~~d~~~l~~~ 189 (337)
++|+.+++.++.... + ++.|++++|+|+.. ...++..|.+ ++.+|. .|++.+++.
T Consensus 107 ~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~ 179 (397)
T 2ord_A 107 TEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRK 179 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHH
Confidence 999999887765321 3 47899999999764 4477778876 444443 278999988
Q ss_pred HHcCCCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEec
Q 047180 190 IKNAPNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 190 l~~~~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
+++ +..++++++||||||. +++.+++++|+++|+++|+++|+||+|.+|.+.. ...+...+ ....+++ |
T Consensus 180 l~~---~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g---~~~~~~~~-~~~~d~~---s 249 (397)
T 2ord_A 180 MSE---DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTG---KLFAYQKY-GVVPDVL---T 249 (397)
T ss_dssp CCT---TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSHHHHH-TCCCSEE---E
T ss_pred hhc---CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCc---cchhhhhh-CCCCCee---e
Confidence 852 3445555789999999 9999999999999999999999999999875321 11112222 1113333 8
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
|||.|+ +|+|+||+++. + +++ . +.........+.+.++|.++..+|+
T Consensus 250 ~sK~~~-~G~r~G~~~~~--~-~~~-~----l~~~~~~~~~~~~~~~~~a~~~~l~ 296 (397)
T 2ord_A 250 TAKGLG-GGVPIGAVIVN--E-RAN-V----LEPGDHGTTFGGNPLACRAGVTVIK 296 (397)
T ss_dssp ECGGGG-TTSCCEEEEEC--S-TTC-C----CCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred eccccC-CCcCeEEEEEc--h-Hhc-c----cCCCCcCCCCCCCHHHHHHHHHHHH
Confidence 899999 89999999863 2 222 2 2221112222467888888887765
No 108
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.87 E-value=2.7e-21 Score=184.67 Aligned_cols=205 Identities=17% Similarity=0.065 Sum_probs=151.3
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
...+||+.|.+. .++.+.+++.+.... ..|.+..+..++++++++++ +.. ..+.+.+|+++
T Consensus 30 ~~~id~~~~~~~-------~~~~v~~a~~~~~~~--~~y~~~~~~~~l~~~la~~~-~~~---------~~v~~~~Gt~a 90 (399)
T 2oga_A 30 VPFLDLKAAYEE-------LRAETDAAIARVLDS--GRYLLGPELEGFEAEFAAYC-ETD---------HAVGVNSGMDA 90 (399)
T ss_dssp BCSCCHHHHHHH-------THHHHHHHHHHHHHH--TCCSSSHHHHHHHHHHHHHT-TSS---------EEEEESCHHHH
T ss_pred CcccccCcCCCC-------CCHHHHHHHHHHHhc--CCCCCchhHHHHHHHHHHHH-CCC---------eEEEecCHHHH
Confidence 357889888542 226677776553111 25766678899999999986 321 24577888999
Q ss_pred HHHHHHHH-hhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 131 CRLFADFQ-KRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 131 l~~~~~~l-~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
+.+++..+ .. +||+|++++|+|+.+...++..|++++.+++. ++++.+|++.+++.++. +..+++ |+|||
T Consensus 91 ~~~~l~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~i~~---~~~~v~---~~n~t 161 (399)
T 2oga_A 91 LQLALRGLGIG--PGDEVIVPSHTYIASWLAVSATGATPVPVEPH-EDHPTLDPLLVEKAITP---RTRALL---PVHLY 161 (399)
T ss_dssp HHHHHHHTTCC--TTCEEEEESSSCTHHHHHHHHTTCEEEEECBC-SSSSSBCHHHHHHHCCT---TEEEEC---CBCGG
T ss_pred HHHHHHHhCCC--CcCEEEECCCccHHHHHHHHHCCCEEEEEecC-CCCCCcCHHHHHHhcCC---CCeEEE---EeCCc
Confidence 99998877 44 89999999999999999999999999999873 33578999999998852 344444 57999
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecc--cccccccccccceeEeee
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSY--AKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RvG~~~~~~ 287 (337)
|.+.+ +++|+++|+++++++|+||+|..+...+.. . +... . .+++.|| ||.||.+| |.||+++
T Consensus 162 G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~----~---~~~~-~-di~~~S~~~sK~~~~~G-~~g~~~~-- 226 (399)
T 2oga_A 162 GHPAD---MDALRELADRHGLHIVEDAAQAHGARYRGR----R---IGAG-S-SVAAFSFYPGKNLGCFG-DGGAVVT-- 226 (399)
T ss_dssp GCCCC---HHHHHHHHHHHTCEECEECTTCTTCEETTE----E---TTCT-T-CEEEEECCTTSSSCCSS-CCEEEEE--
T ss_pred CCccC---HHHHHHHHHHcCCEEEEECcccccCccCCe----e---cccc-c-CEEEEeCCCCccCCcCC-ceEEEEe--
Confidence 99876 778889999999999999999865311111 0 1111 1 3777888 89999889 9999875
Q ss_pred CCHHHHHHHHH
Q 047180 288 EDEKQAVAVKS 298 (337)
Q Consensus 288 ~~~~~~~~~~~ 298 (337)
+++++++++..
T Consensus 227 ~~~~~~~~l~~ 237 (399)
T 2oga_A 227 GDPELAERLRM 237 (399)
T ss_dssp SCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 46776665543
No 109
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.86 E-value=1.7e-21 Score=183.76 Aligned_cols=188 Identities=17% Similarity=0.052 Sum_probs=137.4
Q ss_pred cccchHHHHHHHHh-cC--cCCC-CCCC----CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh
Q 047180 68 PVVLECVREAERRI-AG--TANM-EYLP----MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK 139 (337)
Q Consensus 68 ~~~~~~v~~a~~~~-~~--~~~~-~Y~~----~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~ 139 (337)
..+++.+.+++.+. .. .... .|.. ..+..++|+++++++ +. ++++ +++|+||++++.+++..+.
T Consensus 10 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~-----~~~~--v~~~~g~t~a~~~~~~~l~ 81 (382)
T 4eb5_A 10 KPVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV-NG-----GGGT--VVFTSGATEANNLAIIGYA 81 (382)
T ss_dssp CCCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH-TC-----TTEE--EEEESSHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh-CC-----CCCe--EEEcCchHHHHHHHHHHHH
Confidence 45677788777653 21 1111 2432 135678899999986 32 1233 5789999999999998776
Q ss_pred ----hhCCCCeEEEcCCCCcchHHHHHh---cCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCC
Q 047180 140 ----RFHPDSQIYIPVPTWSNHHNIWRD---AHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVD 212 (337)
Q Consensus 140 ----~~~pgd~Vlv~~P~y~~y~~~~~~---~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~ 212 (337)
. |||+|++++|+|+.+...++. .|++++.+|+. + ++.+|++.+++.++. +..++++++||||||.+
T Consensus 82 ~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~ 154 (382)
T 4eb5_A 82 MRNAR--KGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG-K-YGEVDVSFIDQKLRD---DTILVSVQHANNEIGTI 154 (382)
T ss_dssp HHHGG--GCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBC-T-TSCBCHHHHHHHCCT---TEEEEECCSBCTTTCBB
T ss_pred hhccC--CCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccC-C-CCccCHHHHHHHhcC---CCeEEEEeccCCCcccc
Confidence 5 899999999999998776653 79999999873 3 567999999998853 34556669999999999
Q ss_pred CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 213 PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 213 ~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
++ +++|+++|+++|++ |+||+|. +.. ...+ +..+ ...+++.||||.+|++| +||+++.
T Consensus 155 ~~---l~~i~~l~~~~~~~-i~D~a~~-~g~--~~~~---~~~~----~~di~~~s~sK~~g~~g--~G~~~~~ 212 (382)
T 4eb5_A 155 QP---VEEISEVLAGKAAL-HIDATAS-VGQ--IEVD---VEKI----GADMLTISSNDIYGPKG--VGALWIR 212 (382)
T ss_dssp CC---HHHHHHHHTTSSEE-EEECTTT-BTT--BCCC---HHHH----TCSEEEEETGGGTCCSS--CEEEEEE
T ss_pred CC---HHHHHHHHHHCCCE-EEEcchh-cCC--cccC---cccc----CCCEEEeehHHhcCCCc--eEEEEEc
Confidence 98 57899999999999 9999997 311 1111 1111 24578899999998777 7998874
No 110
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.86 E-value=1.9e-21 Score=187.42 Aligned_cols=255 Identities=11% Similarity=0.002 Sum_probs=147.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|.+.+.-| ..+|.+.+|+.+ +.. ...|.+..+..++++++++++..... .+.++ +++|+||++
T Consensus 29 ~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~--~~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~--v~~~~gg~e 100 (430)
T 3i4j_A 29 RRYLDGSSGALVANIG--HGRAEVGERMAAQAAR--LPFVHGSQFSSDVLEEYAGRLARFVG--LPTFR--FWAVSGGSE 100 (430)
T ss_dssp CEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH--CCCCCTTTCEEHHHHHHHHHHHHHTT--CTTCE--EEEESSHHH
T ss_pred CEEEECCCchhccccC--CCCHHHHHHHHHHHHh--cccccccccCCHHHHHHHHHHHHhCC--CCCCE--EEEeCcHHH
Confidence 3468887764322222 125677776654 322 12344445666677777777644322 12333 689999999
Q ss_pred HHHHHHHHHhhh------CCCCeEEEcCCCCcchHHHHHhcCce---------------eeEeeeccC-CCCCCChHHHH
Q 047180 130 ACRLFADFQKRF------HPDSQIYIPVPTWSNHHNIWRDAHVT---------------QRTFHYYHP-GTKGLDFAALM 187 (337)
Q Consensus 130 al~~~~~~l~~~------~pgd~Vlv~~P~y~~y~~~~~~~G~~---------------~~~~~~~~~-~~~~~d~~~l~ 187 (337)
++..++.++... .++|.|++++|+|+.|...+...+.. +..+|..+. .....|++.++
T Consensus 101 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le 180 (430)
T 3i4j_A 101 ATESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLR 180 (430)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHH
Confidence 999998776542 25789999999999988655544432 222222100 00112568888
Q ss_pred HHHHcCC-CCeEEEEeCCCCC-CCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEE
Q 047180 188 DDIKNAP-NGSFFLLHACAHN-PTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLG 264 (337)
Q Consensus 188 ~~l~~~~-~~~~ili~~~p~N-PTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 264 (337)
+.+++.. .+..+++.+++|| |+|. +++++++++|+++|++||+++|+||+|.+|.... .......+.....++
T Consensus 181 ~~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g---~~~~~~~~~~~~~di- 256 (430)
T 3i4j_A 181 ALLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCG---SPLALSRWSGVTPDI- 256 (430)
T ss_dssp HHHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGGTTTCCCSE-
T ss_pred HHHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccc---chhhhhhhcCCCCcE-
Confidence 8886421 2344444344556 8886 7899999999999999999999999999985321 111111110112233
Q ss_pred EEecccccccccc-cccceeEeeeCCHHHHHHHHHHHHh-hhcccccCCChhHHHHHHHHhC
Q 047180 265 LAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQ-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 265 ~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.+|||.|+. | ||+||+++ ++++++.+...-.. ....+| +.+.++|.++..+|+
T Consensus 257 --~t~sK~l~~-G~~r~G~~~~---~~~i~~~~~~~~~~~~~~~t~-~~~~~~~aaa~aal~ 311 (430)
T 3i4j_A 257 --AVLGKGLAA-GYAPLAGLLA---APQVYETVMGGSGAFMHGFTY-AGHPVSVAAGLSVLD 311 (430)
T ss_dssp --EEECGGGTT-TSSCCEEEEE---CHHHHHHHHHTTCBCCCCCTT-TTCHHHHHHHHHHHH
T ss_pred --EEEcccccC-CccccEEEEE---CHHHHHHHhccCCcccccCCC-CCCHHHHHHHHHHHH
Confidence 368999995 9 99999976 56655554321000 122334 567889998888887
No 111
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.86 E-value=5.8e-21 Score=181.37 Aligned_cols=219 Identities=13% Similarity=0.051 Sum_probs=146.7
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHH---hCCCCcccccCceeEEeeccch
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLA---YGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~---~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
+++|++.|.+ .+.+++.+.+++.. |. +...+.+.+++++ ++.. ++++ +++|+||+
T Consensus 29 ~v~~~~~~~~-----~~~~~~~v~~a~~~--------~~---~~~~~~~~~~~~~a~~~g~~----~~~~--~~~~~ggt 86 (374)
T 2aeu_A 29 ALYDLSGLSG-----GFLIDEKDKALLNT--------YI---GSSYFAEKVNEYGLKHLGGD----ENDK--CVGFNRTS 86 (374)
T ss_dssp GCEECSSCCC-----CCCCCHHHHHHHTS--------TT---HHHHHHHHHHHHHHHHHTCC----TTEE--EEEESSHH
T ss_pred ceeeecccCC-----CCCCCHHHHHHHHH--------hc---CchHHHHHHHHHHHHHhCCC----Ccce--EEEEcChH
Confidence 5789988753 35567777776531 21 1123334444333 2321 1233 57889999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACA 205 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p 205 (337)
+++.+++..+ |||+|++++|+|+.+.. .++..|++++.+ .|++.+++. . ++.++++++++|
T Consensus 87 ~a~~~~~~~~----~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~--~~~~~~v~~~~p 150 (374)
T 2aeu_A 87 SAILATILAL----KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-I--DKDTLVIITGST 150 (374)
T ss_dssp HHHHHHHHHH----CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-C--CTTEEEEEECBC
T ss_pred HHHHHHHHhC----CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-C--CCccEEEEEccC
Confidence 9999988765 79999999999887554 677889988876 267888775 3 334451555899
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
|||||. +..++++|+++|+++|+++|+||+|..+..+..... .+. ..+ ..+++.||||.+ +|+|+||+++
T Consensus 151 ~nptG~--~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~-~~~----~~~-~di~~~S~sK~l--~g~~~G~~~~ 220 (374)
T 2aeu_A 151 MDLKVI--ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQP-PAL----KLG-ADLVVTSTDKLM--EGPRGGLLAG 220 (374)
T ss_dssp TTSCBC--CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCC-CHH----HHT-CSEEEEETTSSS--SSCSCEEEEE
T ss_pred CCCCCC--CcccHHHHHHHHHHcCCEEEEECCcccccccccccC-Ccc----ccC-CcEEEecCcccc--cCcceEEEEE
Confidence 999998 889999999999999999999999977631000000 011 112 357889999984 5899999875
Q ss_pred eeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 286 LCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 286 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
++++++++... ......+++.+.|.++..+|++
T Consensus 221 ---~~~~~~~l~~~----~~~~~~~~~~~~~~a~~~al~~ 253 (374)
T 2aeu_A 221 ---KKELVDKIYIE----GTKFGLEAQPPLLAGIYRALKN 253 (374)
T ss_dssp ---EHHHHHHHHHH----HHTTTCBCCHHHHHHHHHHHHH
T ss_pred ---CHHHHHHHHHh----hccccCCCCHHHHHHHHHHHHH
Confidence 45666655432 2222225677888888888764
No 112
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.86 E-value=1.9e-21 Score=184.64 Aligned_cols=182 Identities=12% Similarity=0.006 Sum_probs=138.0
Q ss_pred chHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH-hhhCCCCeEE
Q 047180 71 LECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ-KRFHPDSQIY 148 (337)
Q Consensus 71 ~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l-~~~~pgd~Vl 148 (337)
.+.+.+++.+. ... ...|.+..+..+||+++++|+ +.. + .++.++| ++|+.+++..+ .. +||+|+
T Consensus 16 ~~~~~~a~~~~l~~~-~~~~~~~~~~~~l~~~la~~~-~~~------~--~i~~~sG-t~al~~~l~~l~~~--~gd~Vi 82 (388)
T 1b9h_A 16 DDAERNGLVRALEQG-QWWRMGGDEVNSFEREFAAHH-GAA------H--ALAVTNG-THALELALQVMGVG--PGTEVI 82 (388)
T ss_dssp CHHHHHHHHHHHHTS-CCBTTTCSHHHHHHHHHHHHT-TCS------E--EEEESCH-HHHHHHHHHHTTCC--TTCEEE
T ss_pred CHHHHHHHHHHHHcC-CeeecCCHHHHHHHHHHHHHh-CCC------e--EEEeCCH-HHHHHHHHHHcCCC--CcCEEE
Confidence 36777776553 332 346777778999999999997 321 1 2345554 89999998877 44 899999
Q ss_pred EcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 047180 149 IPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK 228 (337)
Q Consensus 149 v~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~ 228 (337)
++.|+|+.+...++..|++++.+++. ++++.+|++.+++.+. .+..+++ ||||||.+.+ +++|+++|+++
T Consensus 83 ~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~i~---~~~~~v~---~~n~tG~~~~---l~~i~~la~~~ 152 (388)
T 1b9h_A 83 VPAFTFISSSQAAQRLGAVTVPVDVD-AATYNLDPEAVAAAVT---PRTKVIM---PVHMAGLMAD---MDALAKISADT 152 (388)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBC-TTTCCBCHHHHHHHCC---TTEEEEC---CBCGGGCCCC---HHHHHHHHHHH
T ss_pred ECCCccHHHHHHHHHcCCEEEEEecC-CCcCCCCHHHHHHhcC---cCceEEE---EeCCccCcCC---HHHHHHHHHHc
Confidence 99999999999999999999999983 3357899999999885 2344444 8999999975 67888999999
Q ss_pred CceeEEcccCCCCC-CCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 229 GHFPFFDMAYQGFA-SGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 229 ~~~ii~De~Y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
|++||+|++|.... +. . . . +... ..+++.||||.++++|.|.||+++
T Consensus 153 ~~~li~D~a~~~g~~~~-~-~---~---~~~~--~~i~~~S~s~~K~l~g~~~G~~~~ 200 (388)
T 1b9h_A 153 GVPLLQDAAHAHGARWQ-G-K---R---VGEL--DSIATFSFQNGKLMTAGEGGAVVF 200 (388)
T ss_dssp TCCBCEECTTCTTCEET-T-E---E---GGGS--SSCEEEECCTTSSSCSSSCEEEEE
T ss_pred CCEEEEecchhcCCccC-C-e---e---cccc--cceEEEEccCCCcccCCCeEEEEE
Confidence 99999999997532 21 0 1 1 1111 257889999888888899999986
No 113
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.86 E-value=2.1e-21 Score=186.11 Aligned_cols=203 Identities=13% Similarity=0.043 Sum_probs=142.9
Q ss_pred CCCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCC----------CCCCHHHHHHHHHHHhCCCCcccccCc
Q 047180 50 SPDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLP----------MGGSVKMVEETLKLAYGDNSEFIKDKR 118 (337)
Q Consensus 50 ~~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~----------~~G~~~lr~aia~~~~~~~~~~~~~~~ 118 (337)
+++.+.|..+. ...+++.+.+++.+. ......+++. ..+..++++.+++++ +. ++++
T Consensus 20 ~~~~iyld~~~------~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-~~-----~~~~ 87 (423)
T 3lvm_A 20 MKLPIYLDYSA------TTPVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV-GA-----DPRE 87 (423)
T ss_dssp CCSSEECBTTT------CCCCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH-TC-----CGGG
T ss_pred cCCCEeecCCC------cCCCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc-CC-----CCCe
Confidence 34567666542 134567777776653 2001111111 123367888888876 32 2344
Q ss_pred eeEEeeccchhHHHHHHHHHhh-h-CCCCeEEEcCCCCcchHHHH---HhcCceeeEeeeccCCCCCCChHHHHHHHHcC
Q 047180 119 IAAVQSLSGTGACRLFADFQKR-F-HPDSQIYIPVPTWSNHHNIW---RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA 193 (337)
Q Consensus 119 i~~~~t~g~~~al~~~~~~l~~-~-~pgd~Vlv~~P~y~~y~~~~---~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 193 (337)
+++|+||++|+.+++..+.+ + .|||+|+++.|+|+.+...+ +..|++++.+|+. + ++.+|++.+++.+.+
T Consensus 88 --v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~- 162 (423)
T 3lvm_A 88 --IVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQ-R-NGIIDLKELEAAMRD- 162 (423)
T ss_dssp --EEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCC-T-TSCCCHHHHHHHCCT-
T ss_pred --EEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccC-C-CCccCHHHHHHhcCC-
Confidence 57899999999999876653 1 26999999999999998777 4459999999873 3 578899999998863
Q ss_pred CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc
Q 047180 194 PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM 273 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 273 (337)
+..++++++||||||.+++ +++|+++|+++|++||+||+|..-... . + +.. ....+++.||||.+
T Consensus 163 --~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-~--~------~~~-~~~di~~~s~sK~~ 227 (423)
T 3lvm_A 163 --DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKLP-I--D------LSQ-LKVDLMSFSGHKIY 227 (423)
T ss_dssp --TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTSC-C--C------TTT-SCCSEEEEESTTTT
T ss_pred --CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCCC-c--C------hhh-cCCCEEEechHHhc
Confidence 4556666999999999999 677999999999999999998643210 1 0 111 12458889999999
Q ss_pred cccccccceeEee
Q 047180 274 GLYGQRVGCLSVL 286 (337)
Q Consensus 274 ~~~G~RvG~~~~~ 286 (337)
|.+| +||+++.
T Consensus 228 g~~g--~G~~~~~ 238 (423)
T 3lvm_A 228 GPKG--IGALYVR 238 (423)
T ss_dssp SCSS--CEEEEEC
T ss_pred CCCC--eEEEEEe
Confidence 9777 8999873
No 114
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.85 E-value=6.5e-21 Score=180.72 Aligned_cols=197 Identities=12% Similarity=-0.043 Sum_probs=137.8
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeE
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQI 147 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~V 147 (337)
..+++.+.+++.+.... ..+|....+..++|+++++++ +. ++++ +++|+||++++.+++..+.. |||+|
T Consensus 18 ~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~-g~-----~~~~--v~~t~g~t~a~~~~~~~~~~--~gd~V 86 (392)
T 2z9v_A 18 VNAYPEVLRGLGRTVLY-DYDPAFQLLYEKVVDKAQKAM-RL-----SNKP--VILHGEPVLGLEAAAASLIS--PDDVV 86 (392)
T ss_dssp CCCCHHHHHHTTSCCCC-TTSHHHHHHHHHHHHHHHHHT-TC-----SSCC--EEESSCTHHHHHHHHHHHCC--TTCCE
T ss_pred cCCCHHHHHHHhccccc-cccHHHHHHHHHHHHHHHHHh-CC-----CCCE--EEEeCCchHHHHHHHHHhcC--CCCEE
Confidence 34567777766543111 112222345678999999986 32 2233 57899999999999987754 89999
Q ss_pred EEcCCCCcch--HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 148 YIPVPTWSNH--HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 148 lv~~P~y~~y--~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
++++|+|+.+ ...++..|++++.+|+. + ++.+|++.+++.+++.++.+++ ++++||||||.+++ +++|+++|
T Consensus 87 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~l~~~~~~~~v-~~~~~~nptG~~~~---l~~i~~l~ 160 (392)
T 2z9v_A 87 LNLASGVYGKGFGYWAKRYSPHLLEIEVP-Y-NEAIDPQAVADMLKAHPEITVV-SVCHHDTPSGTINP---IDAIGALV 160 (392)
T ss_dssp EEEESSHHHHHHHHHHHHHCSCEEEEECC-T-TSCCCHHHHHHHHHHCTTCCEE-EEESEEGGGTEECC---HHHHHHHH
T ss_pred EEecCCcccHHHHHHHHHcCCceEEeeCC-C-CCCCCHHHHHHHHhcCCCCcEE-EEeccCCCCceecc---HHHHHHHH
Confidence 9999999876 34456689999999873 3 3569999999998642233444 45899999999998 67899999
Q ss_pred HhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccc-ccccccccceeEeeeCCHHHHHHH
Q 047180 226 KAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKN-MGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 226 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+++|++||+||+|..-. ...+ + ... ...+++.|+||. +|++|+ ||+++ +++.++++
T Consensus 161 ~~~~~~li~D~a~~~g~---~~~~---~---~~~-~~d~~~~s~sK~~~~~~g~--G~l~~---~~~~~~~l 217 (392)
T 2z9v_A 161 SAHGAYLIVDAVSSFGG---MKTH---P---EDC-KADIYVTGPNKCLGAPPGL--TMMGV---SERAWAKM 217 (392)
T ss_dssp HHTTCEEEEECTTTBTT---BSCC---G---GGG-TCSEEEECSSSTTCCCSCC--EEEEE---CHHHHHHH
T ss_pred HHcCCeEEEEcccccCC---cccc---c---ccc-cceEEEecCcccccCCCce--eEEEE---CHHHHHHh
Confidence 99999999999996311 1001 1 111 245788999995 556665 99986 45554444
No 115
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.85 E-value=8.7e-21 Score=182.53 Aligned_cols=243 Identities=12% Similarity=-0.006 Sum_probs=148.1
Q ss_pred CCeeEeeeeeeecCCCCccc-chHHHHHHHH-hcCcCCCCCCCCCCC----HHHHHHHHHHHhCCCCcccccCceeEEee
Q 047180 51 PDKVNVGVGAYRDDNGKPVV-LECVREAERR-IAGTANMEYLPMGGS----VKMVEETLKLAYGDNSEFIKDKRIAAVQS 124 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~-~~~v~~a~~~-~~~~~~~~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t 124 (337)
...+|++.|.+...-| .. +|.+.+|+.+ +... . .|++..+. .++++.+++++ +. .. +++ +++|
T Consensus 42 ~~~lD~~~~~~~~~lG--~~~~p~v~~a~~~~~~~~-~-~~~~~~~~~~~~~~l~~~la~~~-~~---~~-~~~--v~~~ 110 (419)
T 2eo5_A 42 NKYLDFTSGIGVNNLG--WPSHPEVIKIGIEQMQKL-A-HAAANDFYNIPQLELAKKLVTYS-PG---NF-QKK--VFFS 110 (419)
T ss_dssp CEEEESSGGGGTTTTC--BSCCHHHHHHHHHHHTTS-C-CCSCSCSCCHHHHHHHHHHHHHS-SC---SS-CEE--EEEE
T ss_pred CEEEEccCChhhhccC--CCCCHHHHHHHHHHHhhC-c-cccccccCCHHHHHHHHHHHHhC-CC---Cc-CCE--EEEe
Confidence 3468888775321111 22 5778777655 4322 1 13322233 34555555543 21 11 233 6889
Q ss_pred ccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH-HHhcC-------------ceeeEeeeccCCCC----C------
Q 047180 125 LSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI-WRDAH-------------VTQRTFHYYHPGTK----G------ 180 (337)
Q Consensus 125 ~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~-~~~~G-------------~~~~~~~~~~~~~~----~------ 180 (337)
+||++++.++++++..+ +||+|++++|+|+.+... ....| .+++.+|..+ ++ +
T Consensus 111 ~gg~ea~~~ai~~~~~~-~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~~~g~~~~~~ 187 (419)
T 2eo5_A 111 NSGTEAIEASIKVVKNT-GRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPN--PYRNPWHINGYEN 187 (419)
T ss_dssp SSHHHHHHHHHHHHHTT-SCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCC--SSSCTTCCCTTTC
T ss_pred CchHHHHHHHHHHHHHh-hCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCc--ccccccccccccc
Confidence 99999999998765432 389999999999876543 33322 2456666522 22 2
Q ss_pred ------CChHHHH-HHHHcCC--CCeEEEEeCCCC-CCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 181 ------LDFAALM-DDIKNAP--NGSFFLLHACAH-NPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 181 ------~d~~~l~-~~l~~~~--~~~~ili~~~p~-NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
+|++.++ +.+++.. .+.++++ ++|+ ||||. +++++++++|+++|+++|+++|+||+|.+|.... .
T Consensus 188 ~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi-~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g---~ 263 (419)
T 2eo5_A 188 PSELVNRVIEFIEDYIFVNLVPPEEVAGIF-FEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTG---K 263 (419)
T ss_dssp HHHHHHHHHHHHHHTHHHHTCCGGGEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---S
T ss_pred chhhHHHHHHHHHHHHHhhccCCCCEEEEE-EeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCc---c
Confidence 3678888 8776321 2334444 4555 57895 7899999999999999999999999999885321 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
..... ......+++ ||||.||. | +|+||+++. ++++ .+ . .....++ +.+.++|.++..+|+.
T Consensus 264 ~~~~~-~~~~~~d~~---t~sK~~~~-G~~riG~~~~~---~~~~-~~-~---~~~~~t~-~~n~~~~~aa~aal~~ 326 (419)
T 2eo5_A 264 LFAIE-NFNTVPDVI---TLAKALGG-GIMPIGATIFR---KDLD-FK-P---GMHSNTF-GGNALACAIGSKVIDI 326 (419)
T ss_dssp SSGGG-GGTCCCSEE---EECGGGGT-TTSCCEEEEEE---GGGC-CC----------CC-CCCHHHHHHHHHHHHH
T ss_pred hhhHH-hcCCCCCEE---EecccccC-CccceEEEEEc---hHhh-cC-C---cccCCCC-CCCHHHHHHHHHHHHH
Confidence 01111 112223433 79999994 9 999999873 3333 33 1 1122334 4678899998888874
No 116
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.85 E-value=4.6e-21 Score=185.21 Aligned_cols=249 Identities=9% Similarity=-0.072 Sum_probs=152.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|.+...-| ..+|.+.+|+.+ +... ..|....|..++++++++++........+ + .+++|+||++
T Consensus 43 ~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~-~--~v~~~~ggse 115 (439)
T 3dxv_A 43 RELIDLSGAWGAASLG--YGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEGT-H--KIWFGHSGSD 115 (439)
T ss_dssp CEEEESSTTTTTCTTC--BSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTTT-E--EEEEESSHHH
T ss_pred CEEEECCCchhhccCC--CCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCCC-C--EEEEeCCHHH
Confidence 4578888875432222 145677777654 4322 34555567778888888887554321111 2 3689999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhc-Ccee--------------eEeeeccCCCCCC----ChHHHHHHH
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDA-HVTQ--------------RTFHYYHPGTKGL----DFAALMDDI 190 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~-G~~~--------------~~~~~~~~~~~~~----d~~~l~~~l 190 (337)
++..++.++....+++.|++.+|+|+.+....... |... ..+|+.+. .... |++.+++.+
T Consensus 116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~le~~l 194 (439)
T 3dxv_A 116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRPY-RNDPTGDAILTLLTEKL 194 (439)
T ss_dssp HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSCB-TTBTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCcc-cccccHHHHHHHHHHHH
Confidence 99999876432226789999999997765544433 3222 22222110 0111 689999988
Q ss_pred H-cCCCCeEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEec
Q 047180 191 K-NAPNGSFFLLHACAHNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 191 ~-~~~~~~~ili~~~p~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
. ..+.+..++++++++||+|.+. +++.+++|+++|++||++||+||+|.+|.... .......+ ....+++ |
T Consensus 195 ~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g---~~~~~~~~-~~~~di~---s 267 (439)
T 3dxv_A 195 AAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSG---RLHCFEHE-GFVPDIL---V 267 (439)
T ss_dssp HTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTS---SSSGGGGT-TCCCSEE---E
T ss_pred HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCc---hhhHHHhc-CCCCCEE---E
Confidence 4 2223344444466778888765 55669999999999999999999999874311 00111111 1223333 9
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHHHHHhhh-cccccCCChhHHHHHHHHhC
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLA-RPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~~~~~~l~ 324 (337)
|||.|+ +|+|+||+++ +++++ +.+.... ..++ .+.++|.++..+|+
T Consensus 268 ~sK~~~-~G~riG~~~~---~~~~~----~~~~~~~~~~t~--~~~~~~~aa~aal~ 314 (439)
T 3dxv_A 268 LGKGLG-GGLPLSAVIA---PAEIL----DCASAFAMQTLH--GNPISAAAGLAVLE 314 (439)
T ss_dssp ECGGGG-TTSCCEEEEE---EHHHH----TSCSSSSCCTTT--TCHHHHHHHHHHHH
T ss_pred Ecchhc-CCcceEEEEE---CHHHH----hhhcCCCcCCCc--ccHHHHHHHHHHHH
Confidence 999999 5999999986 34433 3333221 2233 57788888877776
No 117
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.85 E-value=2.3e-20 Score=181.53 Aligned_cols=225 Identities=13% Similarity=0.102 Sum_probs=149.9
Q ss_pred CCeeEeeeeeee-cCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 51 PDKVNVGVGAYR-DDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 51 ~~~i~l~~G~~~-~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
.++++|+.|..+ |-.....+ +.+.++..+ +... ...|.+..|..+||+++++++ +. + .++.|+||+
T Consensus 34 ~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~~~-~~-------~--~v~~t~ggt 101 (467)
T 1ax4_A 34 YNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITG-DEAYAGSRNYYDLKDKAKELF-NY-------D--YIIPAHQGR 101 (467)
T ss_dssp SCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTC-CCCSSSCHHHHHHHHHHHHHH-CC-------C--EEEEESSHH
T ss_pred cCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhc-ccccccCccHHHHHHHHHHHc-CC-------C--cEEEcCCcH
Confidence 456777777432 11111222 455554433 3222 346877778899999999997 32 2 257899999
Q ss_pred hHHHHHHHHHhhhC--CCCe---EEEcCCCCcchHHHHHhcCceeeEeeecc---C-----CCCCCChHHHHHHHHcCC-
Q 047180 129 GACRLFADFQKRFH--PDSQ---IYIPVPTWSNHHNIWRDAHVTQRTFHYYH---P-----GTKGLDFAALMDDIKNAP- 194 (337)
Q Consensus 129 ~al~~~~~~l~~~~--pgd~---Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~---~-----~~~~~d~~~l~~~l~~~~- 194 (337)
+|+.+++.++.... |||+ |+++.|.|+.+...++..|++++.++... . .++.+|++++++.+++..
T Consensus 102 ~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~ 181 (467)
T 1ax4_A 102 GAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGA 181 (467)
T ss_dssp HHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCG
T ss_pred HHHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCC
Confidence 99999987764311 7998 99998888988989999999988776421 1 134689999999987421
Q ss_pred CCeEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCceeEEcccCCC--C--------CCCCCccchHHHHHhh----hc
Q 047180 195 NGSFFLLHACAHNPT-GVDPSEEQWKEISYQIKAKGHFPFFDMAYQG--F--------ASGDPERDAKAIRIFL----KD 259 (337)
Q Consensus 195 ~~~~ili~~~p~NPT-G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~--~--------~~~~~~~~~~~~~~~~----~~ 259 (337)
.+..++++++||||| |.+++.+++++|+++|++||++||+||++.. . .+.+. + +..+. ..
T Consensus 182 ~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~ 256 (467)
T 1ax4_A 182 DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNA--T---IKEVIFDMYKY 256 (467)
T ss_dssp GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTC--C---HHHHHHHHGGG
T ss_pred CCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCC--c---hhhhhhhhccc
Confidence 134555558899999 8999999999999999999999999997432 0 11101 1 11121 11
Q ss_pred CCeEEEEecccccccccccccceeEeeeCCH-HHHHHHHH
Q 047180 260 GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE-KQAVAVKS 298 (337)
Q Consensus 260 ~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~-~~~~~~~~ 298 (337)
. . +++.|+||.+|++ +|++++ .+|+ ++++++..
T Consensus 257 ~-d-~~~~s~sK~~g~~---~Gg~~~-~~d~~~l~~~~~~ 290 (467)
T 1ax4_A 257 A-D-ALTMSAKKDPLLN---IGGLVA-IRDNEEIFTLARQ 290 (467)
T ss_dssp C-S-EEEEETTSTTCCS---SCEEEE-ESSCHHHHHHHHH
T ss_pred c-c-eEEEeccccCCCC---cceEEE-eCCHHHHHHHHHh
Confidence 2 2 4558999999865 444333 2446 66666543
No 118
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.85 E-value=1.8e-20 Score=180.37 Aligned_cols=199 Identities=19% Similarity=0.095 Sum_probs=126.2
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCC---------CCHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMG---------GSVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~---------G~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
+.+.|..+.. ..+++.+.+++.+.... ..+|+... ...++|+++++++ +. ++++ ++
T Consensus 18 ~~~~Ld~~~~------~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~-----~~~~--v~ 82 (432)
T 3a9z_A 18 RKVYMDYNAT------TPLEPEVIQAVTEAMKE-AWGNPSSSYVAGRKAKDIINTARASLAKMI-GG-----KPQD--II 82 (432)
T ss_dssp CCEECBTTTC------CCCCHHHHHHHHHHHHH-CCSCTTCSSHHHHHHHHHHHHHHHHHHHHH-TC-----CGGG--EE
T ss_pred CcEEeeCCcc------CCCCHHHHHHHHHHHHH-hcCCCccCcHHHHHHHHHHHHHHHHHHHHc-CC-----CcCe--EE
Confidence 4677766532 34567777776553111 22343211 1358999999987 32 2344 57
Q ss_pred eeccchhHHHHHHHHHhh-h-----CCCCeEEEcCCCCcch-----------------HHHHHhcCceeeEeeeccCCCC
Q 047180 123 QSLSGTGACRLFADFQKR-F-----HPDSQIYIPVPTWSNH-----------------HNIWRDAHVTQRTFHYYHPGTK 179 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~-~-----~pgd~Vlv~~P~y~~y-----------------~~~~~~~G~~~~~~~~~~~~~~ 179 (337)
+|+|+++++.+++..+.+ + .+||+|++++|+|+.| ....+..|++++.+|+. ++++
T Consensus 83 ~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~-~~~~ 161 (432)
T 3a9z_A 83 FTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVS-KVNG 161 (432)
T ss_dssp EESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCC-TTTS
T ss_pred EeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecC-cccC
Confidence 899999999999877641 0 2899999999999987 33445579999999874 2246
Q ss_pred CCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC----------ceeEEcccCCCCCCCCCccc
Q 047180 180 GLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKG----------HFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 180 ~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~----------~~ii~De~Y~~~~~~~~~~~ 249 (337)
.+|++.+++.+.. +..++++++||||||.+++.+ +|+++|++++ ++||+||+|...... . +
T Consensus 162 ~~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~~~---~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~~~-~--~ 232 (432)
T 3a9z_A 162 QVEVEDILAAVRP---TTCLVTIMLANNETGVIMPIS---EISRRIKALNQIRAASGLPRVLVHTDAAQALGKRR-V--D 232 (432)
T ss_dssp SCCHHHHHHTCCT---TEEEEECCSBCTTTCBBCCHH---HHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTTSC-C--C
T ss_pred CcCHHHHHHhccC---CceEEEEECcccCcccccCHH---HHHHHHHhcCcccccccCCceEEEEEchhhhCCcc-c--C
Confidence 7899999987752 345566699999999999965 5778888988 999999999654211 1 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+. ..+.+ +++.||||.|| +|+||+++
T Consensus 233 ---~~---~~~~d-~~~~s~~K~~g---~~~G~~~~ 258 (432)
T 3a9z_A 233 ---VE---DLGVD-FLTIVGHKFYG---PRIGALYV 258 (432)
T ss_dssp ---HH---HHCCS-EEEEEGGGTTC---CSCEEEEE
T ss_pred ---hh---hcCCC-EEEEehhHhcC---CcceEEEE
Confidence 11 12334 45789999874 67999987
No 119
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.85 E-value=2.4e-20 Score=173.28 Aligned_cols=186 Identities=13% Similarity=0.047 Sum_probs=134.4
Q ss_pred HHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceeeEee
Q 047180 97 KMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQRTFH 172 (337)
Q Consensus 97 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~~~~ 172 (337)
+|++.+++++ +. ++ .+++.+|++++.+++..+.. +||+|++++|+|+.+...+ +..|.+++.++
T Consensus 2 ~l~~~la~~~-g~------~~---~i~~~sG~~a~~~~~~~~~~--~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 69 (331)
T 1pff_A 2 ALEGKIAKLE-HA------EA---CAATASGMGAIAASVWTFLK--AGDHLISDDCLYGCTHALFEHQLRKFGVEVDFID 69 (331)
T ss_dssp HHHHHHHHHH-TC------SE---EEEESSHHHHHHHHHHHHCC--TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred hHHHHHHHHh-CC------Ce---EEEeCChHHHHHHHHHHhcC--CCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeC
Confidence 6899999987 32 11 34556668999999886655 8999999999999987765 45899888876
Q ss_pred eccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh-cCceeEEcccCCCCCCCCCccchH
Q 047180 173 YYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKA-KGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 173 ~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~-~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
. .|++.+++.++ + +..+++.++||||||.+++ +++|+++|++ +|+++|+||+|...... .
T Consensus 70 ~-------~d~~~l~~~i~--~-~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~---~--- 130 (331)
T 1pff_A 70 M-------AVPGNIEKHLK--P-NTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT---N--- 130 (331)
T ss_dssp T-------TSTTHHHHTCC--T-TEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC---C---
T ss_pred C-------CCHHHHHHhhc--C-CCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC---C---
Confidence 4 36788888775 2 3444555899999999996 7889999999 99999999999754321 0
Q ss_pred HHHHhhhcCCeEEEEecccccccccccc-cceeEeeeCCHHHHHHHHHHHHhhhcc-cccCCChhHHHHHHHHhC
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYGQR-VGCLSVLCEDEKQAVAVKSQLQQLARP-MYSNPPVHGALIVSTILG 324 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G~R-vG~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~q~~~~~~l~ 324 (337)
+ + . ....+++.||||.|+.+|+| +||+++ ++++++++ +...... ...+.+.+.+.++...++
T Consensus 131 ~---~-~-~~~d~~~~s~~K~~~~~~~r~~G~~~~--~~~~~~~~----l~~~~~~~~~~~~~~~~~~~~~~~l~ 194 (331)
T 1pff_A 131 P---L-D-LGVDIVVHSATKYINGHTDVVAGLVCS--RADIIAKV----KSQGIKDITGAIISPHDAWLITRGTL 194 (331)
T ss_dssp G---G-G-GTCSEEEEETTTTTSSSSSCCCEEEEE--CHHHHHHH----HHTCCCCCCCCCCCHHHHHHHHHHHH
T ss_pred h---h-h-cCCcEEEEECccccCCCCCceEEEEEe--CcHHHHHH----HHHHHHhhcCCCCCHHHHHHHHcCcc
Confidence 1 1 1 13678899999999999999 799876 22244443 4443333 223566677776655554
No 120
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.85 E-value=9.9e-21 Score=179.87 Aligned_cols=238 Identities=11% Similarity=0.020 Sum_probs=149.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCC-CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTAN-MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~-~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
...+|++.+.+...-| ..+|.+.+++.+ +..... ..+.+..-..++++.+++++ + .++ ++.|+||+
T Consensus 36 ~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g-------~~~--v~~~~~gt 103 (392)
T 3ruy_A 36 NRYMDLLSAYSAVNQG--HRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT-N-------KEM--VLPMNTGA 103 (392)
T ss_dssp CEEEESSHHHHTCTTC--BTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH-T-------CSE--EEEESSHH
T ss_pred CEEEEcCCChhhhccC--CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc-C-------CCE--EEEeCcHH
Confidence 3578888764321111 135677777655 322111 11112233466777777765 2 123 57899999
Q ss_pred hHHHHHHHHHhhh--------CCCCeEEEcCCCCcchHHHHHhcCce-------------eeEeeeccCCCCCCChHHHH
Q 047180 129 GACRLFADFQKRF--------HPDSQIYIPVPTWSNHHNIWRDAHVT-------------QRTFHYYHPGTKGLDFAALM 187 (337)
Q Consensus 129 ~al~~~~~~l~~~--------~pgd~Vlv~~P~y~~y~~~~~~~G~~-------------~~~~~~~~~~~~~~d~~~l~ 187 (337)
+|+.+++.++... ..+|+|+++.|+|+.+...+...+.. +..++. .|+++++
T Consensus 104 ~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~ 176 (392)
T 3ruy_A 104 EAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALK 176 (392)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHH
T ss_pred HHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHH
Confidence 9999998766542 13689999999998776555443322 222221 2789999
Q ss_pred HHHHcCCCCeEEEEeCCCCCCCCCCCCHHH-HHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEE
Q 047180 188 DDIKNAPNGSFFLLHACAHNPTGVDPSEEQ-WKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLA 266 (337)
Q Consensus 188 ~~l~~~~~~~~ili~~~p~NPTG~~~s~~~-~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (337)
+.++ .+..++++++||||||.+++.++ +++|+++|+++|+++|+||+|.+|.... ...... ......+++
T Consensus 177 ~~l~---~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g---~~~~~~-~~~~~~d~~-- 247 (392)
T 3ruy_A 177 AAIT---PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTG---KVFACD-WDNVTPDMY-- 247 (392)
T ss_dssp HHCC---TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTS---SSSGGG-GGTCCCSEE--
T ss_pred HHhc---cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccc---cchhhh-ccCCCCCEE--
Confidence 8886 23455555889999999996555 9999999999999999999998875321 111111 111223443
Q ss_pred ecccccccccc-cccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 267 QSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 267 ~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
||||.++ +| +|+||+++ +++++ +.+.........+++.++|.++..+|+.
T Consensus 248 -~~SK~l~-gG~~~~G~~~~---~~~~~----~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 298 (392)
T 3ruy_A 248 -ILGKALG-GGVFPISCAAA---NRDIL----GVFEPGSHGSTFGGNPLACAVSIAALEV 298 (392)
T ss_dssp -EECGGGG-TTTSCCEEEEE---CHHHH----TTCCTTSSCCSSTTCHHHHHHHHHHHHH
T ss_pred -EEchhhh-CChhhhEEEEE---CHHHH----hhhccCCcCCCCCCCHHHHHHHHHHHHH
Confidence 7899876 36 99999986 34433 3333333322335788889888888874
No 121
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.85 E-value=7.7e-21 Score=180.83 Aligned_cols=245 Identities=13% Similarity=0.050 Sum_probs=151.8
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcC--CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTA--NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
...+|++.|.+.+.-+ ++++.+.+++.+. .... ...| +.....++++.+++++ +. +.++ +++|+||
T Consensus 45 ~~~ld~~~~~~~~~~g--~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-~~-----~~~~--v~~~~gg 113 (395)
T 1vef_A 45 NEYIDCVGGYGVANLG--HGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL-PP-----ELNR--VFPVNSG 113 (395)
T ss_dssp CEEEESSHHHHTCTTC--BTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS-CT-----TEEE--EEEESSH
T ss_pred CEEEEccCccccccCC--CCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc-CC-----CcCE--EEEcCcH
Confidence 3468888875321111 2567777776553 2111 1124 3334566777777764 21 2333 5789999
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcc-hHHHHHhcCceeeE---eeeccCC--CCCCChHHHHHHHHcCCCCeEEEE
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSN-HHNIWRDAHVTQRT---FHYYHPG--TKGLDFAALMDDIKNAPNGSFFLL 201 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~-y~~~~~~~G~~~~~---~~~~~~~--~~~~d~~~l~~~l~~~~~~~~ili 201 (337)
++++.+++.++..+.+||+|++++|+|+. +...++..|.+.+. +|+.... -...|++++++.++. +..+++
T Consensus 114 ~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~---~~~~v~ 190 (395)
T 1vef_A 114 TEANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDE---ETAAVI 190 (395)
T ss_dssp HHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCT---TEEEEE
T ss_pred HHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhcc---CEEEEE
Confidence 99999998765422278999999999976 45577777876321 1221100 012489999988852 334444
Q ss_pred eCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccccc
Q 047180 202 HACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV 280 (337)
Q Consensus 202 ~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv 280 (337)
.++++||||.+ .+++++++|+++|+++|++||+||+|.+|.... . ..+... .....+++ ||||.|+. |+|+
T Consensus 191 ~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g--~-~~~~~~-~~~~~d~~---s~sK~~~~-g~~~ 262 (395)
T 1vef_A 191 LEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTG--K-RFAFEH-FGIVPDIL---TLAKALGG-GVPL 262 (395)
T ss_dssp ECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--S-SSTHHH-HTCCCSEE---EECGGGGT-TSSC
T ss_pred EeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCC--c-hhHhhh-cCCCCCEE---EEcccccC-CCce
Confidence 45568999986 579999999999999999999999999874310 1 111111 12223433 88999996 9999
Q ss_pred ceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 281 GCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 281 G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
||+++. ++++++ +.........+++.++|.++..+|+
T Consensus 263 G~~~~~---~~~~~~----l~~~~~~~~~~~~~~~~~a~~~al~ 299 (395)
T 1vef_A 263 GVAVMR---EEVARS----MPKGGHGTTFGGNPLAMAAGVAAIR 299 (395)
T ss_dssp EEEEEE---HHHHHT----SCTTSSCCSSTTCHHHHHHHHHHHH
T ss_pred EEEEeh---HHHHhh----hccCCcCCCcCCCHHHHHHHHHHHH
Confidence 999873 333333 3221111222467778887777775
No 122
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.85 E-value=2.6e-20 Score=177.51 Aligned_cols=200 Identities=11% Similarity=-0.038 Sum_probs=140.7
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cC---cCCCCCC----CCCCCHHHHHHHHHHHhCCCCcccccCceeEEe
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AG---TANMEYL----PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ 123 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~---~~~~~Y~----~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~ 123 (337)
+.+.|..+.. ..+++.+.+++.+. .. .....|. ...+..++|+++++++ +. ++++ ++.
T Consensus 26 ~~~~ld~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~-----~~~~--v~~ 91 (406)
T 3cai_A 26 GWVHFDAPAG------MLIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV-NA-----DPGG--VVL 91 (406)
T ss_dssp SCEECBGGGC------CCCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH-TC-----CGGG--EEE
T ss_pred CeEEEeCCCc------CCCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh-CC-----CCCe--EEE
Confidence 3677776642 24566777776553 21 1111232 2346788999999987 32 2344 578
Q ss_pred eccchhHHHHHHHHHh-hhCCCCeEEEcCCCCcchHHHHHh----cCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeE
Q 047180 124 SLSGTGACRLFADFQK-RFHPDSQIYIPVPTWSNHHNIWRD----AHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 124 t~g~~~al~~~~~~l~-~~~pgd~Vlv~~P~y~~y~~~~~~----~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
|+|+++++.+++..+. .+.+||+|+++.|+|+.+...+.. .|++++.+++. ++++.+|++.+++.+++ +..
T Consensus 92 ~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~-~~~~~~d~~~l~~~l~~---~~~ 167 (406)
T 3cai_A 92 GADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVD-IETGELPTWQWESLISK---STR 167 (406)
T ss_dssp ESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCC-TTTCCCCGGGHHHHCCT---TEE
T ss_pred eCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecC-cccCCcCHHHHHHHhCC---Cce
Confidence 9999999999887662 123899999999999987655543 79999999873 23567899999998852 345
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccc
Q 047180 199 FLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ 278 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 278 (337)
++++++||||||.+++ +++|+++|+++|++||+|++|..-. ...+ ...+ ...+++.|+||.|| ++
T Consensus 168 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~---~~~~---~~~~----~~d~~~~s~~K~~g-~~- 232 (406)
T 3cai_A 168 LVAVNSASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY---RLLD---IRET----DADVVTVNAHAWGG-PP- 232 (406)
T ss_dssp EEEEESBCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT---CCCC---HHHH----CCSEEEEEGGGGTS-CS-
T ss_pred EEEEeCCcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCC---CCCC---chhc----CCCEEEeehhhhcC-CC-
Confidence 5555899999999998 6789999999999999999997321 1011 1111 24577899999887 44
Q ss_pred ccc-eeEe
Q 047180 279 RVG-CLSV 285 (337)
Q Consensus 279 RvG-~~~~ 285 (337)
+| |+++
T Consensus 233 -~G~~~~~ 239 (406)
T 3cai_A 233 -IGAMVFR 239 (406)
T ss_dssp -CEEEEES
T ss_pred -cCeEEEE
Confidence 99 8875
No 123
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.85 E-value=1.2e-20 Score=176.29 Aligned_cols=215 Identities=13% Similarity=-0.002 Sum_probs=143.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
+..|||+.+.+ ..+++.+.+++.+........|++.....++++.+++++ +. +. .+++|+||+++
T Consensus 7 ~~~id~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~------~~--~v~~~~~gt~a 71 (356)
T 1v72_A 7 PPALGFSSDNI------AGASPEVAQALVKHSSGQAGPYGTDELTAQVKRKFCEIF-ER------DV--EVFLVPTGTAA 71 (356)
T ss_dssp CCCCBCSCGGG------CCCCHHHHHHHHHTTSSCCCSTTCSHHHHHHHHHHHHHH-TS------CC--EEEEESCHHHH
T ss_pred CceEeeccCCc------cCCCHHHHHHHHhhccCcccccccchHHHHHHHHHHHHh-CC------CC--cEEEeCCccHH
Confidence 56788887632 234677888776642221345554444456777777765 21 12 25789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHH--HHhc--CceeeEeeeccCCCCCCChHHHHH-HHHcC----CCCeEEEE
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNI--WRDA--HVTQRTFHYYHPGTKGLDFAALMD-DIKNA----PNGSFFLL 201 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~--~~~~--G~~~~~~~~~~~~~~~~d~~~l~~-~l~~~----~~~~~ili 201 (337)
+.+++..+.. |||+|+++.|+|+.+... ++.. |++++.+|. + ++.+|++++++ .+++. ..+..+++
T Consensus 72 ~~~al~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~~i~~~~~~~~~~~~~v~ 146 (356)
T 1v72_A 72 NALCLSAMTP--PWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDG-P--AAKLDIVRLRERTREKVGDVHTTQPACVS 146 (356)
T ss_dssp HHHHHHTSCC--TTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCC-G--GGCCCHHHHHHHTTSSTTCTTSCEEEEEE
T ss_pred HHHHHHHhcC--CCCEEEEcCccchhhhhchHHHHHhCCcEEEEecC-C--CCeEcHHHHHHHhhhcchhhccCCceEEE
Confidence 9988877655 899999999999876555 6666 999999886 3 36899999998 77631 01334444
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh-hcCCeEEEEeccccccccccccc
Q 047180 202 HACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL-KDGHLLGLAQSYAKNMGLYGQRV 280 (337)
Q Consensus 202 ~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~Rv 280 (337)
+++||| ||.+++.+++++|+++|++||++||+|++|..+........ ...+. .....++ +.|+||. |.|+
T Consensus 147 ~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~---~~~~~~~~~~d~~-~~s~sK~----g~~~ 217 (356)
T 1v72_A 147 ITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCS---PAEMTWKAGVDAL-SFGATKN----GVLA 217 (356)
T ss_dssp EESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCC---TTTTTGGGTCCEE-EECCGGG----TCSS
T ss_pred EEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCC---HHHhhhhhcCCEE-EEecccC----CCcC
Confidence 467887 99999999999999999999999999999975421000000 01110 1122344 4589998 3478
Q ss_pred c--eeEeeeCCHHHHHHHH
Q 047180 281 G--CLSVLCEDEKQAVAVK 297 (337)
Q Consensus 281 G--~~~~~~~~~~~~~~~~ 297 (337)
| |+++ ++++++++.
T Consensus 218 G~g~~~~---~~~~~~~~~ 233 (356)
T 1v72_A 218 AEAIVLF---NTSLATEMS 233 (356)
T ss_dssp CEEEEES---SGGGHHHHH
T ss_pred ccEEEEE---CHHHHhhHH
Confidence 8 5543 566666554
No 124
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.85 E-value=1.2e-20 Score=179.24 Aligned_cols=224 Identities=9% Similarity=0.021 Sum_probs=150.6
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCC-CC-CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCe
Q 047180 69 VVLECVREAERRIAGTANMEYLPM-GG-SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ 146 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~-~G-~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~ 146 (337)
.+++.+.+++.+. ....|.+. .+ ..++|+++++++ +.. ++. .+++|+||++++.+++..+.. +||+
T Consensus 28 ~~~~~v~~a~~~~---~~~~~~~~~~~~~~~l~~~la~~~-~~~-----~~~-~v~~~~g~t~al~~~~~~~~~--~gd~ 95 (396)
T 2ch1_A 28 NCSKRVLTAMTNT---VLSNFHAELFRTMDEVKDGLRYIF-QTE-----NRA-TMCVSGSAHAGMEAMLSNLLE--EGDR 95 (396)
T ss_dssp CCCHHHHHHTTSC---CCCTTCHHHHHHHHHHHHHHHHHH-TCC-----CSC-EEEESSCHHHHHHHHHHHHCC--TTCE
T ss_pred CCCHHHHHHhccc---cccCCChhHHHHHHHHHHHHHHHh-CCC-----CCc-EEEECCcHHHHHHHHHHHhcC--CCCe
Confidence 3556677765432 11235442 23 788999999987 321 221 257899999999999987755 8999
Q ss_pred EEEcCCCCcchH--HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 047180 147 IYIPVPTWSNHH--NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 147 Vlv~~P~y~~y~--~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~ 224 (337)
|++++|+|+.|. ..++..|++++.+++. . ++.+|++++++.+++. +.+++++ ++||||||.+++ +++|+++
T Consensus 96 vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~l~~~-~~~~v~~-~~~~nptG~~~~---~~~i~~l 168 (396)
T 2ch1_A 96 VLIAVNGIWAERAVEMSERYGADVRTIEGP-P-DRPFSLETLARAIELH-QPKCLFL-THGDSSSGLLQP---LEGVGQI 168 (396)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECC-T-TSCCCHHHHHHHHHHH-CCSEEEE-ESEETTTTEECC---CTTHHHH
T ss_pred EEEEcCCcccHHHHHHHHHcCCceEEecCC-C-CCCCCHHHHHHHHHhC-CCCEEEE-ECCCCCCceecC---HHHHHHH
Confidence 999999999995 4778899999999873 3 5679999999988742 2345554 889999999999 7789999
Q ss_pred HHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHH---H-
Q 047180 225 IKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQ---L- 300 (337)
Q Consensus 225 ~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~---l- 300 (337)
|+++|++||+||+|. +.. ...+ +...+.+ +++.|++|.++ .+.++|++++ +++.++.+... +
T Consensus 169 ~~~~~~~li~Dea~~-~g~--~~~~------~~~~~~d-~~~~s~~K~~~-~~~g~g~~~~---~~~~~~~~~~~~~~~~ 234 (396)
T 2ch1_A 169 CHQHDCLLIVDAVAS-LCG--VPFY------MDKWEID-AVYTGAQKVLG-APPGITPISI---SPKALDVIRNRRTKSK 234 (396)
T ss_dssp HHHTTCEEEEECTTT-BTT--BCCC------TTTTTCC-EEECCCC-CCC-CCSSCEEEEE---CHHHHHHHHTCSSCCS
T ss_pred HHHcCCEEEEEcccc-ccC--Cccc------hhhcCcC-EEEEcCCcccc-CCCCeEEEEE---CHHHHHhhhhccCccc
Confidence 999999999999997 321 1000 1111223 55689999765 2345698876 44554443210 0
Q ss_pred ---------Hh-h-----hcccccCCChhHHHHHHHHhCC
Q 047180 301 ---------QQ-L-----ARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 301 ---------~~-~-----~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
.. + .+...++++..+|.++..+|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 274 (396)
T 2ch1_A 235 VFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQ 274 (396)
T ss_dssp CGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHH
T ss_pred ceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHH
Confidence 00 0 0122345677788877777764
No 125
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.84 E-value=8.7e-21 Score=179.89 Aligned_cols=206 Identities=15% Similarity=0.059 Sum_probs=145.0
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCC--CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLP--MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
+..+++..|. ..+++.+.+++.+... ..|.+ ..+..++|+++++++ +.. ++ -.+++|+||+
T Consensus 18 ~~~~~~~~g~-------~~~~~~v~~a~~~~~~---~~~~~~~~~~~~~l~~~la~~~-g~~-----~~-~~i~~~~g~t 80 (393)
T 2huf_A 18 PNKLLMGPGP-------SNAPQRVLDAMSRPIL---GHLHPETLKIMDDIKEGVRYLF-QTN-----NI-ATFCLSASGH 80 (393)
T ss_dssp CCCEECSSSC-------CCCCHHHHHHTTSCCC---CTTSHHHHHHHHHHHHHHHHHH-TCC-----CS-EEEEESSCHH
T ss_pred CCeEEecCCC-------CCCCHHHHHHHHhhhc---cCCCHHHHHHHHHHHHHHHHHh-CCC-----CC-cEEEEcCcHH
Confidence 4556666551 3456777776654211 12432 246788999999987 321 22 1357899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchH--HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHH--NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAH 206 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~--~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~ 206 (337)
+++.+++..+.. |||+|++++|+|+.+. ..++..|++++.+|+. . ++.+|++.+++.+++. +.+++++ ++||
T Consensus 81 ~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~~-~~~~v~~-~~~~ 154 (393)
T 2huf_A 81 GGMEATLCNLLE--DGDVILIGHTGHWGDRSADMATRYGADVRVVKSK-V-GQSLSLDEIRDALLIH-KPSVLFL-TQGD 154 (393)
T ss_dssp HHHHHHHHHHCC--TTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECC-T-TCCCCHHHHHHHHHHH-CCSEEEE-ESEE
T ss_pred HHHHHHHHHHhC--CCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCC-C-CCCCCHHHHHHHHhcc-CCcEEEE-EccC
Confidence 999999987755 8999999999998853 4456789999999973 3 4678999999988741 2345554 7899
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccc-ccccccccceeEe
Q 047180 207 NPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKN-MGLYGQRVGCLSV 285 (337)
Q Consensus 207 NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~RvG~~~~ 285 (337)
||||.+++ +++|+++|+++|+++|+||++. +.. ...+ +.. ....+++.|+||. +|++|+ ||+++
T Consensus 155 nptG~~~~---l~~i~~~~~~~~~~li~D~a~~-~~~--~~~~------~~~-~~~d~~~~s~sK~l~g~~G~--G~~~~ 219 (393)
T 2huf_A 155 SSTGVLQG---LEGVGALCHQHNCLLIVDTVAS-LGG--APMF------MDR-WEIDAMYTGSQKVLGAPPGI--TPVSF 219 (393)
T ss_dssp TTTTEECC---CTTHHHHHHHTTCEEEEECTTT-BTT--BCCC------TTT-TTCSEEECCSSSTTCCCSSC--EEEEE
T ss_pred CCccccCC---HHHHHHHHHHcCCEEEEEcccc-cCC--CCcc------hhh-cCccEEEECCCcccccCCCe--EEEEE
Confidence 99999998 7889999999999999999974 211 1000 111 1356788999997 678888 99886
Q ss_pred eeCCHHHHHHHH
Q 047180 286 LCEDEKQAVAVK 297 (337)
Q Consensus 286 ~~~~~~~~~~~~ 297 (337)
++++++++.
T Consensus 220 ---~~~~~~~~~ 228 (393)
T 2huf_A 220 ---SHRAVERYK 228 (393)
T ss_dssp ---CHHHHHHHH
T ss_pred ---CHHHHHHHh
Confidence 465555543
No 126
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.84 E-value=1.1e-20 Score=176.18 Aligned_cols=219 Identities=15% Similarity=0.046 Sum_probs=145.0
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEE
Q 047180 69 VVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIY 148 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vl 148 (337)
.+++.+.+++.+.... ..+|....+..++|+++++++ +. +++ .+++|+||++++.+++..+.. |||+|+
T Consensus 11 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~l~~~la~~~-g~-----~~~--~i~~~~g~t~a~~~~~~~~~~--~gd~vl 79 (352)
T 1iug_A 11 RLHPKALEALARPQLH-HRTEAAREVFLKARGLLREAF-RT-----EGE--VLILTGSGTLAMEALVKNLFA--PGERVL 79 (352)
T ss_dssp CCCHHHHHHHHSCCCC-TTSHHHHHHHHHHHHHHHHHH-TC-----SSE--EEEEESCHHHHHHHHHHHHCC--TTCEEE
T ss_pred CCCHHHHHHhccCCCC-ccCHHHHHHHHHHHHHHHHHh-CC-----CCc--eEEEcCchHHHHHHHHHhccC--CCCeEE
Confidence 4567788877653111 112222345688999999987 32 123 367899999999999987755 899999
Q ss_pred EcCCCCcchH--HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 047180 149 IPVPTWSNHH--NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIK 226 (337)
Q Consensus 149 v~~P~y~~y~--~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~ 226 (337)
+++|+|+.+. ..++..|++++.+++. . ++.+|++++++ ++.+++ ++++||||||.+++ +++|+++|+
T Consensus 80 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~-----~~~~~v-~~~~~~nptG~~~~---l~~i~~l~~ 148 (352)
T 1iug_A 80 VPVYGKFSERFYEIALEAGLVVERLDYP-Y-GDTPRPEDVAK-----EGYAGL-LLVHSETSTGALAD---LPALARAFK 148 (352)
T ss_dssp EEECSHHHHHHHHHHHHTTCEEEEEECC-T-TCCCCTTTSCC-----SSCSEE-EEESEETTTTEECC---HHHHHHHHH
T ss_pred EEeCCchhHHHHHHHHHcCCceEEEeCC-C-CCCCCHHHHhc-----cCCcEE-EEEEecCCcceecC---HHHHHHHHH
Confidence 9999999975 4556689999999873 3 45688887765 233444 44899999999998 678999999
Q ss_pred hc--CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccc-cccccccccceeEeeeCCHHHHHH--------
Q 047180 227 AK--GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAK-NMGLYGQRVGCLSVLCEDEKQAVA-------- 295 (337)
Q Consensus 227 ~~--~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK-~~~~~G~RvG~~~~~~~~~~~~~~-------- 295 (337)
++ |++||+||+|. +.. ...+ +... ...+++.|+|| .++.+| +||+++ +++.+++
T Consensus 149 ~~~~~~~li~D~a~~-~~~--~~~~------~~~~-~~d~~~~s~~K~~~~~~g--~G~~~~---~~~~~~~~~~~~~~~ 213 (352)
T 1iug_A 149 EKNPEGLVGADMVTS-LLV--GEVA------LEAM-GVDAAASGSQKGLMCPPG--LGFVAL---SPRALERLKPRGYYL 213 (352)
T ss_dssp HHCTTCEEEEECTTT-BTT--BCCC------SGGG-TCSEEEEESSSTTCCCSC--EEEEEE---CHHHHHTCCCCSSTT
T ss_pred hhCCCCEEEEECCcc-ccC--ccee------cccc-CeeEEEecCcccccCCCc--eeEEEE---CHHHHHHhhCCCcee
Confidence 99 99999999986 211 1001 1111 24577899999 555545 799886 3444433
Q ss_pred -HHHHHHhh-hcccccCCChhHHHHHHHHhC
Q 047180 296 -VKSQLQQL-ARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 296 -~~~~l~~~-~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+...+... ......+++...+.++..+|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~ 244 (352)
T 1iug_A 214 DLARELKAQKEGESAWTPAINLVLAVAAVLE 244 (352)
T ss_dssp CHHHHHHHHTTTCCSSCCCHHHHHHHHHHHH
T ss_pred eHHHHHhhcccCCCCCCCCHHHHHHHHHHHH
Confidence 22111111 112233466666766665554
No 127
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.84 E-value=5.6e-20 Score=176.39 Aligned_cols=190 Identities=12% Similarity=0.006 Sum_probs=138.8
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----HHhcCcee
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----WRDAHVTQ 168 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~~~~G~~~ 168 (337)
.+..+|++++++++... + .+++.+|++|+.+++. +.. +||+|++++|+|+..... ++..|.++
T Consensus 67 p~~~~l~~~la~~~g~~-------~---~i~~~sG~~ai~~~~~-l~~--~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v 133 (403)
T 3cog_A 67 PTRNCLEKAVAALDGAK-------Y---CLAFASGLAATVTITH-LLK--AGDQIICMDDVYGGTNRYFRQVASEFGLKI 133 (403)
T ss_dssp HHHHHHHHHHHHHHTCS-------E---EEEESCHHHHHHHHHT-TSC--TTCEEEEESSCCHHHHHHHHHTGGGGTCEE
T ss_pred chHHHHHHHHHHHhCCC-------c---EEEECCHHHHHHHHHH-HhC--CCCEEEEeCCCcchHHHHHHHHHHHcCCEE
Confidence 45678999999987321 1 2345555689988877 544 899999999999975443 35689999
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcC-ceeEEcccCCCCCCCCCc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKG-HFPFFDMAYQGFASGDPE 247 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~-~~ii~De~Y~~~~~~~~~ 247 (337)
+.++.. |++.+++.+.. +..++++++||||||.+++ +++|+++|++++ +++|+||+|..+...
T Consensus 134 ~~v~~~-------d~~~l~~~i~~---~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~--- 197 (403)
T 3cog_A 134 SFVDCS-------KIKLLEAAITP---ETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ--- 197 (403)
T ss_dssp EEECTT-------SHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC---
T ss_pred EEECCC-------CHHHHHHhcCc---CCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC---
Confidence 888751 78999888752 3444555899999999997 788999999999 999999999887532
Q ss_pred cchHHHHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
. ++. ....+++.|+||.|+.+|. |+||+++ +++++++++..... ....+++.+.|.++...|+.
T Consensus 198 ~---~~~-----~~~div~~S~sK~~~g~~~~~~G~v~~--~~~~l~~~l~~~~~----~~g~~~~~~~~~~~~~~l~~ 262 (403)
T 3cog_A 198 R---PLA-----LGADISMYSATKYMNGHSDVVMGLVSV--NCESLHNRLRFLQN----SLGAVPSPIDCYLCNRGLKT 262 (403)
T ss_dssp C---TTT-----TTCSEEEEETTTTTTCSSCCCCEEEEE--CCHHHHHHHHHHHH----HHCCCCCHHHHHHHHHHHTT
T ss_pred C---ccc-----cCCeEEEEcChhhccCCCCCeEEEEEE--CcHHHHHHHHHHHH----hcCCCCCHHHHHHHHhhhhH
Confidence 1 111 1356889999999998775 7999986 46676666543222 11224567788888878876
No 128
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.84 E-value=1.4e-20 Score=176.09 Aligned_cols=197 Identities=14% Similarity=0.014 Sum_probs=140.3
Q ss_pred eeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCC-C-CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 53 KVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLP-M-GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 53 ~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~-~-~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
+++++.| + ..+++.+.+|+.+. ..+.|+. . .+..++|+++++++ +. + .+.+ .+++|+||+++
T Consensus 5 ~~~~~~g-p------~~~~~~v~~a~~~~---~~~~~~~~~~~~~~~l~~~la~~~-g~--~-~~~~--~v~~~~g~t~a 68 (366)
T 1m32_A 5 YLLLTPG-P------LTTSRTVKEAMLFD---SCTWDDDYNIGVVEQIRQQLTALA-TA--S-EGYT--SVLLQGSGSYA 68 (366)
T ss_dssp CEECSSS-S------CCCCHHHHHTTCCC---CCTTSHHHHTTTHHHHHHHHHHHH-CS--S-SSEE--EEEEESCHHHH
T ss_pred cccccCC-C------cCCCHHHHHHHhhh---hcCCCHHHHHHHHHHHHHHHHHHh-CC--C-CcCc--EEEEecChHHH
Confidence 5788877 2 22456677765431 1122321 1 68899999999997 32 1 1112 36789999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcC-CCCcc-hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPV-PTWSN-HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~-P~y~~-y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+.+++..+.. +||+|++++ |+|+. |...++..|.+++.+++. . ++.+|++.+++.+++.++.+.++ .++||||
T Consensus 69 ~~~~~~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~l~~~~~~~~v~-~~~~~np 143 (366)
T 1m32_A 69 VEAVLGSALG--PQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCG-E-VARPDVQAIDAILNADPTISHIA-MVHSETT 143 (366)
T ss_dssp HHHHHHHSCC--TTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECC-T-TSCCCHHHHHHHHHHCTTCCEEE-EESEETT
T ss_pred HHHHHHHhcC--CCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCC-C-CCCCCHHHHHHHHhcCCCeEEEE-EecccCC
Confidence 9999988765 899988776 66664 677788899999999873 2 46689999999987532233444 4889999
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc-cccccccceeEe
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM-GLYGQRVGCLSV 285 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~~~ 285 (337)
||.+++ +++|+++|+++|++||+||+|...... . + +.. ....+++.|+||.+ |.+ ++||+++
T Consensus 144 tG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~~-~--~------~~~-~~~di~~~s~~K~~~~~~--g~G~~~~ 206 (366)
T 1m32_A 144 TGMLNP---IDEVGALAHRYGKTYIVDAMSSFGGIP-M--D------IAA-LHIDYLISSANKCIQGVP--GFAFVIA 206 (366)
T ss_dssp TTEECC---HHHHHHHHHHHTCEEEEECTTTTTTSC-C--C------TTT-TTCSEEEEESSSTTCCCS--SEEEEEE
T ss_pred cceecC---HHHHHHHHHHcCCEEEEECCccccCcC-c--c------ccc-cCccEEEecCcccccCCC--ceEEEEE
Confidence 999998 678999999999999999999743221 1 1 111 12468889999977 544 4699987
No 129
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.84 E-value=1.4e-19 Score=172.07 Aligned_cols=192 Identities=12% Similarity=0.052 Sum_probs=138.8
Q ss_pred CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----HHhcCce
Q 047180 92 MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----WRDAHVT 167 (337)
Q Consensus 92 ~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~~~~G~~ 167 (337)
..+..+|++++++++... +. ++ +.+|++++.+++..+.. +||+|+++.|+|+..... ++..|.+
T Consensus 51 ~~~~~~l~~~la~~~~~~-------~~--i~-~~sGt~a~~~~~~~~~~--~g~~vl~~~~~~~~~~~~~~~~~~~~g~~ 118 (386)
T 1cs1_A 51 NPTRDVVQRALAELEGGA-------GA--VL-TNTGMSAIHLVTTVFLK--PGDLLVAPHDCYGGSYRLFDSLAKRGCYR 118 (386)
T ss_dssp CHHHHHHHHHHHHHHTCS-------EE--EE-ESSHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHHHHTTTSCE
T ss_pred CccHHHHHHHHHHHhCCC-------cE--EE-eCCHHHHHHHHHHHHhC--CCCEEEEecCCcHhHHHHHHHHHHhcCCE
Confidence 346688999999997321 22 33 44559999999887655 899999999999974443 4667888
Q ss_pred eeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCc
Q 047180 168 QRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPE 247 (337)
Q Consensus 168 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~ 247 (337)
++.++. .|++.+++.+.+ +.+++++ ++||||||.+++ +++|+++|+++|+++|+||+|..+...
T Consensus 119 ~~~~~~-------~d~~~l~~~i~~--~~~~v~~-~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~--- 182 (386)
T 1cs1_A 119 VLFVDQ-------GDEQALRAALAE--KPKLVLV-ESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ--- 182 (386)
T ss_dssp EEEECT-------TCHHHHHHHHHT--CCSEEEE-ECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC---
T ss_pred EEEeCC-------CCHHHHHHhhcc--CCcEEEE-eCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC---
Confidence 888764 278999998873 3345554 889999999996 788999999999999999999887532
Q ss_pred cchHHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
. +. .. ...+++.|+||.|+.+|.|+ ||+++ +++++++++..... ....+.+.+++.++...++.
T Consensus 183 ~---~~----~~-~~di~~~s~sK~~~~~~~~~~G~~~~--~~~~l~~~l~~~~~----~~~~~~~~~~~~~~~~~l~~ 247 (386)
T 1cs1_A 183 N---PL----AL-GADLVLHSCTKYLNGHSDVVAGVVIA--KDPDVVTELAWWAN----NIGVTGGAFDSYLLLRGLRT 247 (386)
T ss_dssp C---GG----GG-TCSEEEEETTTTTTCSSCCCCEEEEE--SSHHHHHHHHHHHH----HHTCBCCHHHHHHHHHHHTT
T ss_pred C---cc----cc-CceEEEEcCcccccCCCCceeEEEEe--CcHHHHHHHHHHHH----hcCCCCCHHHHHHHHhcccH
Confidence 1 11 11 35688999999999999998 99876 45566565543221 11123566677766666653
No 130
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.84 E-value=3.1e-20 Score=179.20 Aligned_cols=244 Identities=11% Similarity=0.010 Sum_probs=148.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|.....-| ..+|.+.+|+.+ +.....++| +.....+|++.+++++. . .++ ++.|+||++
T Consensus 55 ~~ylD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~~--~-----~~~--v~~~~sGse 122 (434)
T 3l44_A 55 NKYIDYLAAYGPIITG--HAHPHITKAITTAAENGVLYGT-PTALEVKFAKMLKEAMP--A-----LDK--VRFVNSGTE 122 (434)
T ss_dssp CEEEECCGGGTTCSSC--BTCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHCT--T-----CSE--EEEESSHHH
T ss_pred CEEEECCCchhccccC--CCCHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHhCC--C-----CCE--EEEeCchHH
Confidence 3568887764321112 246777777654 432222344 44456678888888752 1 233 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCce-eeEeeeccCCCCC-------------CChHHHHHHHHcCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVT-QRTFHYYHPGTKG-------------LDFAALMDDIKNAPN 195 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~-~~~~~~~~~~~~~-------------~d~~~l~~~l~~~~~ 195 (337)
++.+++.++....++++|++++|+|..+...+...+.. ...+..... ... -|++.+++.+++.+.
T Consensus 123 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 201 (434)
T 3l44_A 123 AVMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDS-AGVPQSIAQEVITVPFNNVETLKEALDKWGH 201 (434)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSS-TTCCHHHHTTEEEECTTCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCc-CCCCCcCCCceEecCcccHHHHHHHHHhCCC
Confidence 99999876543336799999999999876544333221 111111000 000 178999988874333
Q ss_pred CeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 196 GSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
+..+++.+++||++|.+ ++++++++|.++|++||+++|+||+|.+|..+. ......+ ....+ +.||||.|+
T Consensus 202 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~g~----~~~~~~~-~~~~d---i~t~sK~~~ 273 (434)
T 3l44_A 202 EVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRFMY----GGAQDLL-GVTPD---LTALGKVIG 273 (434)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTSSS----SCHHHHH-TCCCS---EEEEEGGGG
T ss_pred CEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceeccc----cHHHHHc-CCCCC---eeehhhhhc
Confidence 34445534344455544 499999999999999999999999999983221 1111111 11223 457999999
Q ss_pred ccccccceeEeeeCCHHHHHHHHHHHHh---h-hcccccCCChhHHHHHHHHhC
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVKSQLQQ---L-ARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~---~-~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+|||+||+++ ++++++. +.. . ...++ +.+.++|.++..+|+
T Consensus 274 -~G~~iG~~~~---~~~i~~~----~~~~~~~~~~~t~-~~~~~a~aaa~aal~ 318 (434)
T 3l44_A 274 -GGLPIGAYGG---KKEIMEQ----VAPLGPAYQAGTM-AGNPASMASGIACLE 318 (434)
T ss_dssp -TTSSCEEEEE---CHHHHTT----BTTTSSBCCCCTT-TTCHHHHHHHHHHHH
T ss_pred -CCcCeeeEEE---cHHHHHh----hccCCCcccCCCC-CcCHHHHHHHHHHHH
Confidence 8999999865 4554433 322 1 12233 467788888877775
No 131
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.84 E-value=7.9e-20 Score=174.71 Aligned_cols=216 Identities=14% Similarity=0.056 Sum_probs=140.5
Q ss_pred cccchHHHHHHHHh-cCcCCCCCC--CCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCC
Q 047180 68 PVVLECVREAERRI-AGTANMEYL--PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPD 144 (337)
Q Consensus 68 ~~~~~~v~~a~~~~-~~~~~~~Y~--~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg 144 (337)
.+..+.+.++.... +....+.|. +.....++++.+++++ +. + ..+++.+|++|+.+++..+.. +|
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~-g~-------~--~~i~~~sG~~a~~~~l~~~~~--~g 104 (398)
T 1gc0_A 37 TFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLE-GG-------E--AGLALASGMGAITSTLWTLLR--PG 104 (398)
T ss_dssp CBCCC---------------------CCHHHHHHHHHHHHHH-TC-------S--EEEEESSHHHHHHHHHHHHCC--TT
T ss_pred ccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHh-CC-------C--cEEEECCHHHHHHHHHHHHhc--CC
Confidence 44556665554322 121223343 3345667899999986 32 1 135666778999998887755 89
Q ss_pred CeEEEcCCCCcchHHHH----HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHH
Q 047180 145 SQIYIPVPTWSNHHNIW----RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKE 220 (337)
Q Consensus 145 d~Vlv~~P~y~~y~~~~----~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~ 220 (337)
|+|++++|+|+.+...+ +..|.+++.++. .|++.+++.+.+ +..++++++||||||.+++ +++
T Consensus 105 d~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~ 171 (398)
T 1gc0_A 105 DEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALEAAMTP---ATRVIYFESPANPNMHMAD---IAG 171 (398)
T ss_dssp CEEEEESSCCSHHHHHHHHTGGGGTCEEEEECT-------TCHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHH
T ss_pred CEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCccccc---HHH
Confidence 99999999999988776 667888887764 278999988852 3445555899999999996 788
Q ss_pred HHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHHHHHHH
Q 047180 221 ISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAVAVKSQ 299 (337)
Q Consensus 221 l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~~~~~~ 299 (337)
|+++|+++|+++|+||+|..+..+ . + + .. ...+++.|+||.|+.+|+|+ ||+++ +++.++. .
T Consensus 172 i~~l~~~~~~~li~D~~~~~~~~~---~---~---~-~~-~~d~~~~S~sK~~~~~~~~~~G~l~~---~~~~~~~---~ 234 (398)
T 1gc0_A 172 VAKIARKHGATVVVDNTYCTPYLQ---R---P---L-EL-GADLVVHSATKYLSGHGDITAGIVVG---SQALVDR---I 234 (398)
T ss_dssp HHHHHGGGTCEEEEECTTTHHHHC---C---G---G-GG-TCSEEEEETTTTTTCSSSCCCEEEEE---CHHHHHH---H
T ss_pred HHHHHHHcCCEEEEECCCcccccC---C---c---h-hh-CceEEEECCccccCCCCCCeEEEEEE---ChHHHHH---H
Confidence 999999999999999999865421 1 1 1 11 24688899999999999998 88875 3443331 1
Q ss_pred HHhhhcc-cccCCChhHHHHHHHHhCC
Q 047180 300 LQQLARP-MYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 300 l~~~~~~-~~~~~~~~~q~~~~~~l~~ 325 (337)
+...... .-...+.+.+.++...++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~l~~ 261 (398)
T 1gc0_A 235 RLQGLKDMTGAVLSPHDAALLMRGIKT 261 (398)
T ss_dssp HHTHHHHHTCCCCCHHHHHHHHHHHTT
T ss_pred HHHHhhccCCCCCCHHHHHHHHhccch
Confidence 2222111 1123566777777777765
No 132
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.84 E-value=1.3e-19 Score=172.86 Aligned_cols=197 Identities=12% Similarity=0.027 Sum_probs=141.9
Q ss_pred CCCCC--CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----
Q 047180 87 MEYLP--MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI---- 160 (337)
Q Consensus 87 ~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~---- 160 (337)
+.|+. .....+|++.+++++ +. + ..+++.+|++|+.+++..+.. +||+|++++|+|+.+...
T Consensus 51 ~~y~~~~~~~~~~l~~~la~~~-g~-------~--~~i~~~sG~~ai~~~~~~~~~--~gd~vl~~~~~y~~~~~~~~~~ 118 (389)
T 3acz_A 51 HIYSRLGNPTVEQFEEMVCSIE-GA-------A--GSAAFGSGMGAISSSTLAFLQ--KGDHLIAGDTLYGCTVSLFTHW 118 (389)
T ss_dssp CCBTTTCCHHHHHHHHHHHHHH-TC-------S--EEEEESSHHHHHHHHHTTTCC--TTCEEEEESSCCHHHHHHHHHH
T ss_pred cccCCCCChHHHHHHHHHHHHh-CC-------C--eEEEeCCHHHHHHHHHHHHhC--CCCEEEEeCCCchHHHHHHHHH
Confidence 44543 234568999999986 32 1 235677788999988876644 899999999999987665
Q ss_pred HHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC
Q 047180 161 WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG 240 (337)
Q Consensus 161 ~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~ 240 (337)
++..|.+++.++. .|++.+++.+.+ +..++++++||||||.+++ +++|+++|+++|+++|+|++|..
T Consensus 119 ~~~~g~~~~~v~~-------~d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~ 185 (389)
T 3acz_A 119 LPRFGIEVDLIDT-------SDVEKVKAAWKP---NTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTS 185 (389)
T ss_dssp HHHTTCEEEEECT-------TCHHHHHHTCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTC
T ss_pred HHHcCCEEEEECC-------CCHHHHHHhcCC---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcc
Confidence 5778999988865 378899887752 3445555899999999997 78899999999999999999987
Q ss_pred CCCCCCccchHHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHH
Q 047180 241 FASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIV 319 (337)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~ 319 (337)
+..+ . ++. ....+++.|+||.|+.+|.|+ ||+++ +++++++++.... .....+.+.+.+.++
T Consensus 186 ~~~~---~---~~~-----~~~di~~~S~sK~~~~~~~~~~G~v~~--~~~~~~~~l~~~~----~~~g~~~~~~~~~~~ 248 (389)
T 3acz_A 186 PCFL---K---PLE-----LGADIALHSVSKYINGHGDVIGGVSSA--KTAEDIATIKFYR----KDAGSLMAPMDAFLC 248 (389)
T ss_dssp TTTC---C---GGG-----TTCSEEEEETTTTTTCSSCCCCEEEEE--SSHHHHHHHHHHH----HHHCCCCCHHHHHHH
T ss_pred cccc---C---ccc-----cCCeEEEECChhhccCCCCceeEEEEE--CcHHHHHHHHHHH----HhcCCCCCHHHHHHH
Confidence 6432 1 111 135688899999999999999 99876 3335555554322 111223455677777
Q ss_pred HHHhCC
Q 047180 320 STILGD 325 (337)
Q Consensus 320 ~~~l~~ 325 (337)
...|+.
T Consensus 249 ~~~l~~ 254 (389)
T 3acz_A 249 ARGMKT 254 (389)
T ss_dssp HHHHTT
T ss_pred HcCccH
Confidence 777765
No 133
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.84 E-value=1.4e-20 Score=176.89 Aligned_cols=159 Identities=18% Similarity=0.072 Sum_probs=120.2
Q ss_pred HHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh----hhCCCCeEEEcCCCCcchHHHHHh---cCceee
Q 047180 97 KMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK----RFHPDSQIYIPVPTWSNHHNIWRD---AHVTQR 169 (337)
Q Consensus 97 ~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~----~~~pgd~Vlv~~P~y~~y~~~~~~---~G~~~~ 169 (337)
++++.+++++ +. ++++ +++|+|+++++.+++..+. + |||+|++++|+|+.|...++. .|++++
T Consensus 47 ~~~~~la~~~-~~-----~~~~--i~~~~g~~~a~~~~~~~~~~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~ 116 (382)
T 4hvk_A 47 EAREKVAKLV-NG-----GGGT--VVFTSGATEANNLAIIGYAMRNAR--KGKHILVSAVEHMSVINPAKFLQKQGFEVE 116 (382)
T ss_dssp HHHHHHHHHT-TC-----TTEE--EEEESSHHHHHHHHHHHHHHHHGG--GCCEEEEETTCCHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHc-CC-----CcCe--EEEECCchHHHHHHHHHhhhhhcC--CCCEEEECCCCcHHHHHHHHHHHhcCCEEE
Confidence 6777777765 32 2333 5789999999999988775 5 899999999999999876554 699999
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.+|+. + ++.+|++++++.++ +++.++++++||||||.+++ +++|+++|+++|+ ||+|++|..-. ...+
T Consensus 117 ~v~~~-~-~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~---~~~~ 184 (382)
T 4hvk_A 117 YIPVG-K-YGEVDVSFIDQKLR---DDTILVSVQHANNEIGTIQP---VEEISEVLAGKAA-LHIDATASVGQ---IEVD 184 (382)
T ss_dssp EECBC-T-TSCBCHHHHHHHCC---TTEEEEECCSBCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTBTT---BCCC
T ss_pred EeccC-C-CCCcCHHHHHHHhc---cCceEEEEECCCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCC---CCCC
Confidence 99873 3 57899999999885 24556667999999999998 5678899999999 99999875321 1111
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
.. .. ...+++.|+||.+|++| +|++++.
T Consensus 185 ---~~---~~-~~d~~~~s~~K~~g~~g--~g~~~~~ 212 (382)
T 4hvk_A 185 ---VE---KI-GADMLTISSNDIYGPKG--VGALWIR 212 (382)
T ss_dssp ---HH---HH-TCSEEEEESGGGTSCTT--CEEEEEE
T ss_pred ---ch---hc-CCCEEEEeHHHhcCCCc--eEEEEEc
Confidence 11 11 23578899999988766 6777653
No 134
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.83 E-value=4.6e-20 Score=179.68 Aligned_cols=254 Identities=14% Similarity=0.066 Sum_probs=154.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|.....-| ..+|.|.+|+.+ +.. ..+.|....+..+.++++++++..... .+.++ ++.|+||++
T Consensus 50 ~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~-~~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~--v~~~~ggse 122 (459)
T 4a6r_A 50 NKIIDGMAGLWCVNVG--YGRKDFAEAARRQMEE-LPFYNTFFKTTHPAVVELSSLLAEVTP--AGFDR--VFYTNSGSE 122 (459)
T ss_dssp CEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-CSCCCTTSSSCCHHHHHHHHHHHHHSC--TTCCE--EEEESSHHH
T ss_pred CEEEECCCchhcccCC--CCCHHHHHHHHHHHHh-ccccccccccCCHHHHHHHHHHHHhCC--CCCCE--EEEeCchHH
Confidence 3468887763321122 135677776654 422 122354445666777777777644321 12333 689999999
Q ss_pred HHHHHHHHHhhh------CCCCeEEEcCCCCcchHHHHHhcCce---------------eeEeee-ccCCCCCCC-----
Q 047180 130 ACRLFADFQKRF------HPDSQIYIPVPTWSNHHNIWRDAHVT---------------QRTFHY-YHPGTKGLD----- 182 (337)
Q Consensus 130 al~~~~~~l~~~------~pgd~Vlv~~P~y~~y~~~~~~~G~~---------------~~~~~~-~~~~~~~~d----- 182 (337)
|+..++.++... .++++|++.+|+|+.|.......+.. .+++|. +...++ +|
T Consensus 123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~ 201 (459)
T 4a6r_A 123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG 201 (459)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence 999998777642 14799999999999987665554331 222222 010112 45
Q ss_pred ---hHHHHHHHHcCC-CCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh
Q 047180 183 ---FAALMDDIKNAP-NGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL 257 (337)
Q Consensus 183 ---~~~l~~~l~~~~-~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 257 (337)
++.+++.+.+.. .+..+++..+.+|++|. +++++++++|.++|++||+++|+||+|.+|.... .......+
T Consensus 202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G---~~~~~~~~- 277 (459)
T 4a6r_A 202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTG---EWFGHQHF- 277 (459)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHHH-
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc---ccchHhhc-
Confidence 678888776321 23344442333444444 6699999999999999999999999999985321 11111211
Q ss_pred hcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhh-hcccccCCChhHHHHHHHHhC
Q 047180 258 KDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQL-ARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 258 ~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~~~~~~l~ 324 (337)
....++ .+|||.++..|||+||+++ ++++++.+... ... ...+| +.+.++|.++..+|+
T Consensus 278 ~~~pdi---~t~sK~l~gg~~~lg~v~~---~~~i~~~~~~~-~~~~~~~t~-~~~~~~~aaa~aal~ 337 (459)
T 4a6r_A 278 GFQPDL---FTAAKGLSSGYLPIGAVFV---GKRVAEGLIAG-GDFNHGFTY-SGHPVCAAVAHANVA 337 (459)
T ss_dssp TCCCSE---EEECGGGGTTSSCCEEEEE---CHHHHHHHHHH-CTTHHHHHH-CSCHHHHHHHHHHHH
T ss_pred CCCCCe---eehhhhhcCCCCCccceee---CHHHHHHhhcC-CCcccCCCC-CCCHHHHHHHHHHHH
Confidence 222333 3689999865599999875 56666655421 111 12234 457788998888887
No 135
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.83 E-value=7.5e-20 Score=180.62 Aligned_cols=207 Identities=12% Similarity=0.025 Sum_probs=145.6
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCC---
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPD--- 144 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg--- 144 (337)
+...+.+.++...........|....+..++.+.+++|+.+..+...+++++..++|+||++++.+++.++.. +|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~--~g~~~ 187 (514)
T 3mad_A 110 EHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRD--WARAT 187 (514)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHH--HHHHH
T ss_pred CCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHH--Hhhhh
Confidence 3344455666554322223445444566678888877765443332223555458999999999999988766 45
Q ss_pred -----CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHH
Q 047180 145 -----SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWK 219 (337)
Q Consensus 145 -----d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~ 219 (337)
|+|+++.|+|+.|...++..|.+++.+|+. + ++.+|++.|++++.+ +..+++.++||||||.+.+ ++
T Consensus 188 ~g~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~-~-~~~~d~~~Le~~i~~---~~~~v~~~~~~nptG~~~~---l~ 259 (514)
T 3mad_A 188 KGITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLD-A-DYRADVAAMREAITP---NTVVVAGSAPGYPHGVVDP---IP 259 (514)
T ss_dssp HCCSSCEEEEETTSCTHHHHHHHHHTCEEEEECBC-T-TSCBCHHHHHHHCCT---TEEEEEEETTCTTTCCCCC---HH
T ss_pred cCCCCCeEEEeCccchHHHHHHHHcCCeeEEeeeC-C-CCCCCHHHHHHHhcc---CCEEEEEeCCCCCCccccC---HH
Confidence 999999999999999999999999999983 3 688999999998863 3455566899999999987 67
Q ss_pred HHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh-hcCCeEEEEecccccccccccccceeEe
Q 047180 220 EISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL-KDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 220 ~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+|+++|+++|+++|+||+|.++..........+...+. ....-.+++.|++|.++ +|.++|++++
T Consensus 260 ~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~~~~~~~g~d~~~~s~~K~l~-~~~~~g~~~~ 325 (514)
T 3mad_A 260 EIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPPFDFRLEGVTSVSADTHKYGY-GAKGTSVILY 325 (514)
T ss_dssp HHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCSTTSTTCCEEEECTTTTTC-CCSSCEEEEE
T ss_pred HHHHHHHHhCCeEEEecccccccchhHHhcCCCCCcccccCCCCcEEEECchhccC-CCCCeEEEEE
Confidence 88999999999999999999875210000000000010 01123567789999865 6889999986
No 136
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.83 E-value=5.2e-20 Score=178.70 Aligned_cols=251 Identities=10% Similarity=0.007 Sum_probs=150.8
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|.....-|. .+|.|.+|+.+ +... . +.+..+..+.+.++++++...... +.+ ++.|+||++
T Consensus 49 ~~~lD~~~~~~~~~lG~--~~p~v~~A~~~~~~~~-~--~~~~~~~~~~~~~la~~l~~~~~~--~~~---v~~~~ggse 118 (452)
T 3n5m_A 49 KRYLDGMSGLWCVNSGY--GRKELAEAAYKQLQTL-S--YFPMSQSHEPAIKLAEKLNEWLGG--EYV---IFFSNSGSE 118 (452)
T ss_dssp CEEEETTHHHHTCTTCB--CCHHHHHHHHHHHTTC-C--CCCTTSEEHHHHHHHHHHHHHHTS--CEE---EEEESSHHH
T ss_pred CEEEECCcchhhccCCC--CCHHHHHHHHHHHHhc-C--CcccccCCHHHHHHHHHHHHhCCC--Cce---EEEeCchHH
Confidence 45788887743222222 35777777655 4321 1 122334455666666665332211 112 578999999
Q ss_pred HHHHHHHHHhhh---C---CCCeEEEcCCCCcchHHHHHhcCcee-------------eEeeeccCCCCCC-C-------
Q 047180 130 ACRLFADFQKRF---H---PDSQIYIPVPTWSNHHNIWRDAHVTQ-------------RTFHYYHPGTKGL-D------- 182 (337)
Q Consensus 130 al~~~~~~l~~~---~---pgd~Vlv~~P~y~~y~~~~~~~G~~~-------------~~~~~~~~~~~~~-d------- 182 (337)
|+..++.++... . ++|+|++.+|+|+.+.......+... ..++......... |
T Consensus 119 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (452)
T 3n5m_A 119 ANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDV 198 (452)
T ss_dssp HHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHH
Confidence 999999877632 3 57999999999999876655544331 2222111000111 1
Q ss_pred --hHHHHHHHH-cCCCCeEEEEeCCC-CCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh
Q 047180 183 --FAALMDDIK-NAPNGSFFLLHACA-HNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL 257 (337)
Q Consensus 183 --~~~l~~~l~-~~~~~~~ili~~~p-~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 257 (337)
++.|++.++ ..+.+.++++.+++ || ||.++ +++++++|.++|++||+++|+||+|.+|... . .......+
T Consensus 199 ~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~-g--~~~~~~~~- 273 (452)
T 3n5m_A 199 ECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRT-G--KAFGFMNY- 273 (452)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT-S--SSSGGGGT-
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcc-c--ccchhhhc-
Confidence 788888886 22233444444556 89 99765 8999999999999999999999999998531 1 01111111
Q ss_pred hcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHH--HHHhh-hcccccCCChhHHHHHHHHhC
Q 047180 258 KDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKS--QLQQL-ARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 258 ~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~--~l~~~-~~~~~~~~~~~~q~~~~~~l~ 324 (337)
....+ +.+|||.++. | +|+||+++ ++++++.+.. ....+ ...++ +.+.++|.++..+|+
T Consensus 274 ~~~~d---i~t~sK~l~~-G~~~ig~~~~---~~~i~~~~~~~~~~~~~~~~~t~-~~~~~~~aaa~aal~ 336 (452)
T 3n5m_A 274 DVKPD---IITMAKGITS-AYLPLSATAV---KREIYEAFKGKGEYEFFRHINTF-GGNPAACALALKNLE 336 (452)
T ss_dssp TCCCS---EEEECGGGGT-TSSCCEEEEE---EHHHHGGGCSSSTTCSCCCCCSS-TTCHHHHHHHHHHHH
T ss_pred CCCCC---EEeecccccC-CCcceEEEEE---CHHHHHHHhhccCCCCccccCCC-CCCHHHHHHHHHHHH
Confidence 11123 3369999996 9 99999986 3444333211 00111 12233 467788888888876
No 137
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.83 E-value=3.4e-19 Score=170.20 Aligned_cols=190 Identities=14% Similarity=0.052 Sum_probs=140.8
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~ 169 (337)
...+|++.+++++ +. + .++++.||++|+.+++..+.. +||+|+++.|+|+.+...+ +..|.+++
T Consensus 67 ~~~~l~~~la~~~-g~-------~--~~~~~~sGt~A~~~al~~~~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~ 134 (392)
T 3qhx_A 67 TRTALEAALAAVE-DA-------A--FGRAFSSGMAAADCALRAMLR--PGDHVVIPDDAYGGTFRLIDKVFTGWNVEYT 134 (392)
T ss_dssp HHHHHHHHHHHHT-TC-------S--EEEEESSHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHHTGGGGTCEEE
T ss_pred HHHHHHHHHHHHh-CC-------C--cEEEECCHHHHHHHHHHHHhC--CCCEEEEeCCCcchHHHHHHHHHHhcCcEEE
Confidence 4567899999875 22 1 257888899999998876655 8999999999999887766 66888888
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++.. |++.+++++.+ +..++++++||||||.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 135 ~v~~~-------d~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~---~- 197 (392)
T 3qhx_A 135 PVALA-------DLDAVRAAIRP---TTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ---Q- 197 (392)
T ss_dssp EECTT-------CHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC---C-
T ss_pred EeCCC-------CHHHHHHhhCC---CCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC---C-
Confidence 88651 78999988852 3445555899999999987 888999999999999999999765321 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+. .. ...+++.|+||.+|.+| +|.||++. +++++.+.+... ......+.+.+.+.++...++.
T Consensus 198 --~~----~~-~~di~~~S~sK~lg~~g~~~~G~v~~--~~~~~~~~l~~~----~~~~g~~~~~~~~~~~~~~l~~ 261 (392)
T 3qhx_A 198 --PL----SL-GADVVLHSTTKYIGGHSDVVGGALVT--NDEELDQSFAFL----QNGAGAVPGPFDAYLTMRGLKT 261 (392)
T ss_dssp --GG----GG-TCSEEEEETTTTTTCSSCCCCEEEEE--SCHHHHHHHHHH----HHHHCCCCCHHHHHHHHHHHTT
T ss_pred --hH----Hh-CCcEEEEcCccccCCCCCceEEEEEE--CcHHHHHHHHHH----HHhcCCCCCHHHHHHHHhhhhH
Confidence 11 11 23578899999999888 79999886 456666555432 2212234567777777777765
No 138
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.83 E-value=6.6e-20 Score=175.31 Aligned_cols=189 Identities=12% Similarity=0.038 Sum_probs=135.2
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCcee
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQ 168 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~ 168 (337)
.+..++|+++|+++ +.. ..+++++|++|+.+++. +.+ +||+|+++.|.|+.... .++..|.++
T Consensus 55 ~~~~~lr~~la~~~-g~~---------~~i~~~sGt~a~~~al~-~~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v 121 (393)
T 1n8p_A 55 PNRENLERAVAALE-NAQ---------YGLAFSSGSATTATILQ-SLP--QGSHAVSIGDVYGGTHRYFTKVANAHGVET 121 (393)
T ss_dssp HHHHHHHHHHHHHT-TCS---------EEEEESCHHHHHHHHHH-TSC--SSCEEEEESSCCHHHHHHHHHTSTTTCSCC
T ss_pred hhHHHHHHHHHHHh-CCC---------cEEEECChHHHHHHHHH-HcC--CCCEEEEeCCCchHHHHHHHHHHHHcCcEE
Confidence 34678999999986 321 13566667999999888 655 89999999999985443 456689898
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc----CceeEEcccCCCCCCC
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK----GHFPFFDMAYQGFASG 244 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~----~~~ii~De~Y~~~~~~ 244 (337)
+.+|+. | +++++.+.. ++.++++++||||||.+++ +++|+++|+++ ++++|+|++|..+...
T Consensus 122 ~~v~~~-------d-~~l~~~i~~---~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~ 187 (393)
T 1n8p_A 122 SFTNDL-------L-NDLPQLIKE---NTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS 187 (393)
T ss_dssp EEESSH-------H-HHHHHHSCS---SEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC
T ss_pred EEeCCC-------h-HHHHHhccc---CceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC
Confidence 888752 6 788887752 3455555999999999997 78888999999 9999999999876431
Q ss_pred CCccchHHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHh
Q 047180 245 DPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTIL 323 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l 323 (337)
+. + .. ...+++.|+||.||.+|+|+ ||+++ .++++++.+...... .-...+.+.+.++...+
T Consensus 188 ----~~-----~-~~-~~di~~~S~sK~~g~~G~rigG~~~~--~~~~~~~~l~~~~~~----~g~~~~~~~~~~~~~~l 250 (393)
T 1n8p_A 188 ----NP-----L-NF-GADIVVHSATKYINGHSDVVLGVLAT--NNKPLYERLQFLQNA----IGAIPSPFDAWLTHRGL 250 (393)
T ss_dssp ----CG-----G-GG-TCSEEEEETTTTTTCSSCCCCEEEEE--SCHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHH
T ss_pred ----CH-----H-Hc-CCeEEEEECcccccCCCCceeEEEEe--CCHHHHHHHHHHHHh----cCCCCCHHHHHHHHhcc
Confidence 11 1 11 25688999999999999999 98875 456666665542211 11233455555555566
Q ss_pred CC
Q 047180 324 GD 325 (337)
Q Consensus 324 ~~ 325 (337)
+.
T Consensus 251 ~~ 252 (393)
T 1n8p_A 251 KT 252 (393)
T ss_dssp TT
T ss_pred ch
Confidence 54
No 139
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.83 E-value=4.9e-20 Score=173.68 Aligned_cols=197 Identities=12% Similarity=0.047 Sum_probs=136.5
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEE
Q 047180 69 VVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIY 148 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vl 148 (337)
.+++.+.+++.+.... ...+.......++++.+++++ +.. .+.+ .+++|+|+++++. ++..+.. |||+|+
T Consensus 12 ~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~~~~la~~~-~~~---~~~~--~v~~~~g~t~al~-~~~~~~~--~gd~vi 81 (384)
T 3zrp_A 12 TIKEDVLVAGLENNVG-FTSKEFVEALAYSLKGLRYVM-GAS---KNYQ--PLIIPGGGTSAME-SVTSLLK--PNDKIL 81 (384)
T ss_dssp CCCHHHHHHTTCCSCC-TTSHHHHHHHHHHHHHHHHHH-TCC---TTSE--EEEEESCHHHHHH-HGGGGCC--TTCEEE
T ss_pred CCCHHHHHHhhccccc-cccHHHHHHHHHHHHHHHHHh-CCC---CCCc--EEEEcCCcHHHHH-HHHhhcC--CCCEEE
Confidence 4566677665432111 111111234567888888876 322 1113 3578999999999 7765544 899999
Q ss_pred EcCCCCcc--hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 047180 149 IPVPTWSN--HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIK 226 (337)
Q Consensus 149 v~~P~y~~--y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~ 226 (337)
+++|+|+. +...++..|++++.+|+. . ++.+|++.+++.+.+. +..++++++||||||.+++ +++|+++|+
T Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~~--~~~~v~~~~~~nptG~~~~---l~~i~~l~~ 154 (384)
T 3zrp_A 82 VVSNGVFGDRWEQIFKRYPVNVKVLRPS-P-GDYVKPGEVEEEVRKS--EYKLVALTHVETSTGVREP---VKDVINKIR 154 (384)
T ss_dssp EECSSHHHHHHHHHHTTSSCEEEEECCS-T-TCCCCHHHHHHHHHHS--CEEEEEEESEETTTTEECC---HHHHHHHHG
T ss_pred EecCCcchHHHHHHHHHcCCcEEEecCC-C-CCCCCHHHHHHHHHhC--CCcEEEEeCCCCCCceECc---HHHHHHHHH
Confidence 99999965 667778899999999873 3 4678999999999752 2445555899999999998 678999999
Q ss_pred hcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 227 AKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 227 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
++|++||+|++|...... . + +.. ....+++.|+||.++ .+.++||+++ +++.++++
T Consensus 155 ~~~~~li~D~a~~~~~~~-~--~------~~~-~~~d~~~~s~~K~~~-~~~g~g~~~~---~~~~~~~~ 210 (384)
T 3zrp_A 155 KYVELIVVDGVSSVGAEE-V--K------AEE-WNVDVYLTASQKALG-SAAGLGLLLL---SPKALSIL 210 (384)
T ss_dssp GGEEEEEEECTTTTTTSC-C--C------TTT-TTCSEEEEETTSTTC-CCSSEEEEEE---CHHHHHHH
T ss_pred hcCCEEEEECcccccCcc-c--c------ccc-cCCCEEEecCccccc-CCCceEEEEE---CHHHHHHh
Confidence 999999999998643211 1 0 111 134688899999885 2344899886 45555554
No 140
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.83 E-value=2.8e-20 Score=174.41 Aligned_cols=181 Identities=14% Similarity=0.028 Sum_probs=123.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCC--eEEEcCCCCcchH---HHH
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDS--QIYIPVPTWSNHH---NIW 161 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd--~Vlv~~P~y~~y~---~~~ 161 (337)
..|++..+..+|++++++++ +.. . .+++++|++++.+++.++.. +|| +|+++.++|+.+. ...
T Consensus 41 ~~y~~~~~~~~l~~~la~~~-~~~------~---~i~~~~G~~a~~~al~~~~~--~gd~~~vi~~~~~~~~~~~~~~~~ 108 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVL-GMD------D---AVFFPSGTMAQQVALRIWSD--ETDNRTVAYHPLCHLEIHEQDGLK 108 (357)
T ss_dssp EETTEETTHHHHHHHHHHHH-TCS------E---EEEESCHHHHHHHHHHHHHH--HHTCCEEEECTTCHHHHSSTTHHH
T ss_pred ccccCChHHHHHHHHHHHHh-CCC------c---EEEecCcHHHHHHHHHHHhh--cCCCcEEEecccceeeeeccchhh
Confidence 45777678899999999987 321 1 24557778888888877766 777 6777766654332 245
Q ss_pred HhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCceeEEcccCCC
Q 047180 162 RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT-GVDPSEEQWKEISYQIKAKGHFPFFDMAYQG 240 (337)
Q Consensus 162 ~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT-G~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~ 240 (337)
...|++++.++. +++.+|++++++. .+.++++ +|+||||| |.+++.+++++|+++|++||++||+||+|..
T Consensus 109 ~~~g~~~~~v~~---~~~~~d~~~l~~~----~~~~~v~-~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~ 180 (357)
T 3lws_A 109 ELHPIETILVGA---ADRLMTLDEIKAL----PDIACLL-LELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLF 180 (357)
T ss_dssp HHSSCEEEECSC---TTSCCCHHHHHTC----CSCSEEE-EESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHH
T ss_pred hccCcEEEEecC---CCCCcCHHHHhcC----cCcceEE-EEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhh
Confidence 667889888874 2467999998865 2234444 48999998 9999999999999999999999999999862
Q ss_pred CCCCCCccchHHHHHhhhcCCeEEEEecccccc-cccccccceeEeeeCCHHHHHHHHH
Q 047180 241 FASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
......... ...+....+ . ++.||||.| ++.| ||++. ++++++++..
T Consensus 181 ~~~~~~~~~---~~~~~~~~d-~-~~~s~sK~~~~~~g---g~~~~---~~~~~~~~~~ 228 (357)
T 3lws_A 181 EMLPYYEKT---AAEIAGLFD-S-IYISFYKGLGGIAG---AILAG---PAAFCQTARI 228 (357)
T ss_dssp HHHHHHTCC---HHHHHTTSS-E-EEEESSSTTCCSSC---EEEEE---CHHHHHHHHH
T ss_pred hhhhhcCCC---hHHHHhcCC-E-EEEeccccCCCCce---EEEEc---CHHHHHHHHH
Confidence 110000011 122222223 3 378999999 5444 88764 6666666543
No 141
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.83 E-value=1.8e-19 Score=175.59 Aligned_cols=255 Identities=12% Similarity=0.039 Sum_probs=156.1
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|.....-| ..+|.+.+|+.+ +... .+.|....|..++++++++++..... .+.++ +++|+||++
T Consensus 51 ~~~lD~~~~~~~~~lG--~~~p~v~~A~~~~~~~~-~~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~--v~~~~gGse 123 (460)
T 3gju_A 51 RKSIDAFAGLYCVNVG--YGRQKIADAIATQAKNL-AYYHAYVGHGTEASITLAKMIIDRAP--KGMSR--VYFGLSGSD 123 (460)
T ss_dssp CEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHHH-SCCCCCTTCCCHHHHHHHHHHHHHSC--TTEEE--EEEESSHHH
T ss_pred CEEEECCcchhhccCC--CCCHHHHHHHHHHHHhc-cccccccccCCHHHHHHHHHHHhhCC--CCcCE--EEEeCchHH
Confidence 3568887773321122 235667766544 3221 23454455666677777777644321 12233 689999999
Q ss_pred HHHHHHHHHhhh------CCCCeEEEcCCCCcchHHHHHhcCc-------------eeeEeeec---cCCCCCCC-----
Q 047180 130 ACRLFADFQKRF------HPDSQIYIPVPTWSNHHNIWRDAHV-------------TQRTFHYY---HPGTKGLD----- 182 (337)
Q Consensus 130 al~~~~~~l~~~------~pgd~Vlv~~P~y~~y~~~~~~~G~-------------~~~~~~~~---~~~~~~~d----- 182 (337)
|+..++.++... .++++|++.+|+|+.+.......+. .+..+|.. ..++++.+
T Consensus 124 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 203 (460)
T 3gju_A 124 ANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFS 203 (460)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHH
Confidence 999998776542 2469999999999998765544322 12333321 11123344
Q ss_pred ---hHHHHHHHHcC-CCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh
Q 047180 183 ---FAALMDDIKNA-PNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL 257 (337)
Q Consensus 183 ---~~~l~~~l~~~-~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 257 (337)
++.+++.+.+. +.+.++++.++++|++|. +++++.+++|.++|++||+++|+||+|.+|... . .......+
T Consensus 204 ~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~-g--~~~~~~~~- 279 (460)
T 3gju_A 204 QHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRL-G--TMFGSDHY- 279 (460)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-S--SSCHHHHH-
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcc-c--ccchHhhc-
Confidence 57888877632 123444444556777776 889999999999999999999999999988531 1 11111111
Q ss_pred hcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHH---HHhhh-cccccCCChhHHHHHHHHhC
Q 047180 258 KDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQ---LQQLA-RPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 258 ~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~---l~~~~-~~~~~~~~~~~q~~~~~~l~ 324 (337)
....++ .+|||+++- | ||+||+++ ++++++.+... ..... ..+| +.+.++|.++..+|+
T Consensus 280 ~~~pdi---~t~sK~l~g-G~~~lg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~-~~~~~~~aaa~aal~ 343 (460)
T 3gju_A 280 GIKPDL---ITIAKGLTS-AYAPLSGVIV---ADRVWQVLVQGSDKLGSLGHGWTY-SAHPICVAAGVANLE 343 (460)
T ss_dssp TCCCSE---EEECGGGTT-TSSCCEEEEE---EHHHHHHHHHHHHHHCSCSCCCTT-TTCHHHHHHHHHHHH
T ss_pred CCCCCe---eeeehhhcC-CCCCeEEEEE---CHHHHHHHhcccccccccccCCCC-CCCHHHHHHHHHHHH
Confidence 222333 368999984 6 89999886 45555555321 01112 2334 467788988888886
No 142
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.83 E-value=1.7e-19 Score=173.69 Aligned_cols=154 Identities=13% Similarity=0.041 Sum_probs=117.3
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh----cCceeeEe
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD----AHVTQRTF 171 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~----~G~~~~~~ 171 (337)
.+|++.++++. +. + .++++++|++|+.+++..+.. |||+|++++|+|+.+...++. .|.+++.+
T Consensus 84 ~~l~~~la~~~-g~-------~--~~~~~~sG~~Ai~~al~~l~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v 151 (414)
T 3ndn_A 84 SVFEERLRLIE-GA-------P--AAFATASGMAAVFTSLGALLG--AGDRLVAARSLFGSCFVVCSEILPRWGVQTVFV 151 (414)
T ss_dssp HHHHHHHHHHH-TC-------S--EEEEESSHHHHHHHHHHTTCC--TTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred HHHHHHHHHHH-CC-------C--cEEEECCHHHHHHHHHHHHhC--CCCEEEEcCCccchHHHHHHHHHHHcCcEEEEe
Confidence 44666666654 21 1 247888999999988877655 999999999999998877754 89999988
Q ss_pred eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchH
Q 047180 172 HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAK 251 (337)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~ 251 (337)
++. |++.+++++.. +.+++++ ++||||||.+.+ +++|+++|+++|+++|+||+|...... .
T Consensus 152 ~~~-------d~~~l~~ai~~--~t~~v~l-e~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~---~--- 212 (414)
T 3ndn_A 152 DGD-------DLSQWERALSV--PTQAVFF-ETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ---Q--- 212 (414)
T ss_dssp CTT-------CHHHHHHHTSS--CCSEEEE-ESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC---C---
T ss_pred CCC-------CHHHHHHhcCC--CCeEEEE-ECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC---C---
Confidence 751 78999998863 3445555 899999999976 778999999999999999999732210 0
Q ss_pred HHHHhhhcCCeEEEEecccccccccc-cccceeEe
Q 047180 252 AIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSV 285 (337)
Q Consensus 252 ~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~ 285 (337)
+ + ..+ ..+++.|+||.||.+| +|.|++++
T Consensus 213 ~---~-~~g-~div~~S~sK~l~~~G~~~~G~vv~ 242 (414)
T 3ndn_A 213 G---F-PLG-VDVVVYSGTKHIDGQGRVLGGAILG 242 (414)
T ss_dssp C---G-GGT-CSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred c---h-hcC-CCeEeccCCccccCCCCceEEEEEE
Confidence 0 1 112 3578899999999889 89999876
No 143
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.83 E-value=1.9e-20 Score=180.54 Aligned_cols=249 Identities=12% Similarity=0.026 Sum_probs=149.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|...+.-| ..+|.+.+|+.+ +...... |.+..+..+|++.+++++. . .++ ++.|+||++
T Consensus 53 ~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~~~~~-~~~~~~~~~l~~~la~~~~--~-----~~~--v~~~~~Gse 120 (429)
T 3k28_A 53 NEYIDYVLSWGPLIHG--HANDRVVEALKAVAERGTSF-GAPTEIENKLAKLVIERVP--S-----IEI--VRMVNSGTE 120 (429)
T ss_dssp CEEEESCGGGTTCTTC--BSCHHHHHHHHHHHHHCSCC-SSCCHHHHHHHHHHHHHST--T-----CSE--EEEESSHHH
T ss_pred CEEEECCCChhhcccC--CCCHHHHHHHHHHHhhCcCc-CCCCHHHHHHHHHHHHhCC--C-----CCE--EEEeCChHH
Confidence 4578888775322222 246777777654 4322223 3355567789999998752 1 233 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCceeeEeeeccCCCCC------------CChHHHHHHHHcCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHVTQRTFHYYHPGTKG------------LDFAALMDDIKNAPNG 196 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~~~~~~~~~~~~~~~------------~d~~~l~~~l~~~~~~ 196 (337)
++..++.++....++++|++.+|+|..+...+. ..|.....++........ -|++.+++.+.+.+.+
T Consensus 121 a~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 200 (429)
T 3k28_A 121 ATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDD 200 (429)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCC
Confidence 999998766533357899999999987654332 233222222211100000 1789999888743333
Q ss_pred eEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 197 SFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 197 ~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
..+++..+++|++|. +++++++++|.++|++||+++|+||+|.+| .. . .......+ ....+ +.+|||.|+.
T Consensus 201 ~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~-g--~~~~~~~~-~~~~d---i~t~sK~~~~ 272 (429)
T 3k28_A 201 IACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RV-A--YNCGQGYY-GVTPD---LTCLGKVIGG 272 (429)
T ss_dssp EEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TS-S--TTHHHHHH-TCCCS---EEEECGGGGT
T ss_pred EEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-cc-C--cchHHHHh-CCCCc---eehhhhhhcC
Confidence 444443333444454 457899999999999999999999999988 32 1 11111111 11223 3479999995
Q ss_pred cccccceeEeeeCCHHHHHHHHHHHHhh-hcccccCCChhHHHHHHHHhCC
Q 047180 276 YGQRVGCLSVLCEDEKQAVAVKSQLQQL-ARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|+|+||+++ ++++++.+.. .... ...++ +.+.++|.++..+|+.
T Consensus 273 -G~~iG~~~~---~~~~~~~~~~-~~~~~~~~t~-~~~~~a~aaa~aal~~ 317 (429)
T 3k28_A 273 -GLPVGAYGG---KAEIMRQVAP-SGPIYQAGTL-SGNPLAMAAGYETLVQ 317 (429)
T ss_dssp -TSCCEEEEE---CHHHHTTBTT-TSSBCCCCTT-TTCHHHHHHHHHHHHT
T ss_pred -CCCeEEEEE---cHHHHhhhcc-CCCccccCCC-CCChHHHHHHHHHHHH
Confidence 999999876 4544433221 0001 12233 5678899998888874
No 144
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.83 E-value=8.4e-20 Score=173.53 Aligned_cols=204 Identities=17% Similarity=0.021 Sum_probs=142.1
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCC-CCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYL-PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~-~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
+++++++.|.+ ..++.+.+++.+.... ..|. +..|..+||+++++++... .++.|.||++
T Consensus 22 ~~~~~l~~~~p-------~~~~~~~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~~~~----------~~i~~~~gt~ 82 (391)
T 3dr4_A 22 SDLPRISVAAP-------RLDGNERDYVLECMDT--TWISSVGRFIVEFEKAFADYCGVK----------HAIACNNGTT 82 (391)
T ss_dssp ------CCCCC-------CCCSSHHHHHHHHHHH--TCCSSCSHHHHHHHHHHHHHHTCS----------EEEEESSHHH
T ss_pred CCCceeccCCC-------CCCHHHHHHHHHHHHc--CCccCCChHHHHHHHHHHHHhCCC----------cEEEeCCHHH
Confidence 46778888743 3346666666553111 2354 5678899999999997321 2467889999
Q ss_pred HHHHHHHHH-hhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 130 ACRLFADFQ-KRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 130 al~~~~~~l-~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
|+.+++..+ .. +||+|+++.|+|+.+...++..|++++.+++ +++++.+|++.+++.+. .+..+++ |+||
T Consensus 83 al~~~l~~~~~~--~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~~~---~~~~~v~---~~n~ 153 (391)
T 3dr4_A 83 ALHLALVAMGIG--PGDEVIVPSLTYIASANSVTYCGATPVLVDN-DPRTFNLDAAKLEALIT---PRTKAIM---PVHL 153 (391)
T ss_dssp HHHHHHHHHTCC--TTCEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCGGGSGGGCC---TTEEEEC---CBCG
T ss_pred HHHHHHHHcCCC--CcCEEEECCCchHHHHHHHHHCCCEEEEEec-CccccCcCHHHHHHhcC---CCceEEE---EECC
Confidence 999998877 44 8999999999999999999999999999998 43468899999988775 2344444 5789
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
||.+.+ +++|+++|+++|+++|+|++|.... +.+ . . .....+ +.+.||||..+++|.|.|+++.
T Consensus 154 tG~~~~---~~~i~~l~~~~~~~li~D~a~~~g~~~~~--~---~---~~~~~d--i~~~S~s~~K~l~~g~gg~~~~-- 218 (391)
T 3dr4_A 154 YGQICD---MDPILEVARRHNLLVIEDAAEAVGATYRG--K---K---SGSLGD--CATFSFFGNAIITTGEGGMITT-- 218 (391)
T ss_dssp GGCCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETT--E---E---TTSSSS--EEEEECBTTSSSCCBSCEEEEE--
T ss_pred CCChhh---HHHHHHHHHHcCCEEEEECcccccceECC--e---e---ecccCC--EEEEECCCCCcCCcCCeEEEEE--
Confidence 999865 6778899999999999999997532 110 0 0 111112 6678888554555678898875
Q ss_pred CCHHHHHHHH
Q 047180 288 EDEKQAVAVK 297 (337)
Q Consensus 288 ~~~~~~~~~~ 297 (337)
+++++.+++.
T Consensus 219 ~~~~~~~~~~ 228 (391)
T 3dr4_A 219 NDDDLAAKMR 228 (391)
T ss_dssp SCHHHHHHHH
T ss_pred CCHHHHHHHH
Confidence 5666655544
No 145
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.83 E-value=8.2e-20 Score=175.37 Aligned_cols=195 Identities=14% Similarity=0.065 Sum_probs=139.4
Q ss_pred cccchHHHHHHHHh-cCcCCCCCCCCCCC----HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH-hhh
Q 047180 68 PVVLECVREAERRI-AGTANMEYLPMGGS----VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ-KRF 141 (337)
Q Consensus 68 ~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~----~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l-~~~ 141 (337)
+..++.+.+++.+. .......|++..|. .++++.+++++ +. +. .+.+.+|++++.+++..+ ..
T Consensus 12 ~~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~-g~-------~~--~i~~~~gt~al~~~~~~~~~~- 80 (418)
T 2c81_A 12 PQHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN-GV-------PY--CVPTTSGSTALMLALEALGIG- 80 (418)
T ss_dssp SCCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH-TC-------SE--EEEESCHHHHHHHHHHHTTCC-
T ss_pred CCCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh-CC-------Cc--EEEeCCHHHHHHHHHHHcCCC-
Confidence 34457777776653 32222338777785 45555566554 22 11 356777899999998877 44
Q ss_pred CCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHH
Q 047180 142 HPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEI 221 (337)
Q Consensus 142 ~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l 221 (337)
+||+|+++.|+|+.+...++..|++++.+++ +++++.+|++.+++.++. +..+++. +||||... ++++|
T Consensus 81 -~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~~---~~~~v~~---~~~~G~~~---~~~~i 149 (418)
T 2c81_A 81 -EGDEVIVPSLTWIATATAVLNVNALPVFVDV-EADTYCIDPQLIKSAITD---KTKAIIP---VHLFGSMA---NMDEI 149 (418)
T ss_dssp -TTCEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHGGGCCT---TEEEECC---BCCTTCCC---CHHHH
T ss_pred -CcCEEEECCCccHhHHHHHHHcCCEEEEEec-CCCCCCcCHHHHHHhhCC---CCeEEEE---eCCcCCcc---cHHHH
Confidence 8999999999999999999999999999987 333688999999887752 3444443 46999874 57888
Q ss_pred HHHHHhcCceeEEcccCCCCC-CCCCccchHHHHHhhhcCCeEEEEecc--cccccccccccceeEeeeCCHHHHHHHHH
Q 047180 222 SYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIRIFLKDGHLLGLAQSY--AKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 222 ~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+++|++++++||+||+|..+. ++ . . + +.... -+++.|| ||.|+. | |.||++. +++++++++..
T Consensus 150 ~~~~~~~~~~li~D~a~~~~~~~~-~-~---~---~~~~~--~~~~~s~s~~K~~~~-g-~~g~~~~--~~~~l~~~~~~ 215 (418)
T 2c81_A 150 NEIAQEHNLFVIEDCAQSHGSVWN-N-Q---R---AGTIG--DIGAFSCQQGKVLTA-G-EGGIIVT--KNPRLFELIQQ 215 (418)
T ss_dssp HHHHHHTTCEEEEECTTCTTCEET-T-E---E---TTSSS--SEEEEECCTTSSSCS-S-SCEEEEE--SCHHHHHHHHH
T ss_pred HHHHHHCCCEEEEECcccccCccC-C-E---e---ccccc--ceEEEeccCCcccCC-C-CeEEEEE--CCHHHHHHHHH
Confidence 999999999999999998875 22 1 1 0 11112 2667788 999997 8 9999875 46676666543
No 146
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.82 E-value=8.7e-20 Score=175.71 Aligned_cols=238 Identities=13% Similarity=0.032 Sum_probs=145.6
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|...+.-| ..+|.+.+|+.+ +... .+ +. ..+..++++.+++++....+ .++ ++.|+||++
T Consensus 57 ~~~lD~~~~~~~~~lG--~~~p~v~~ai~~~~~~~-~~-~~-~~~~~~~~~~l~~~la~~~g----~~~--v~~~~ggte 125 (420)
T 2pb2_A 57 KEYIDFAGGIAVTALG--HCHPALVEALKSQGETL-WH-TS-NVFTNEPALRLGRKLIDATF----AER--VLFMNSGTE 125 (420)
T ss_dssp CEEEESSHHHHTCTTC--BTCHHHHHHHHHHHTTC-CC-CC-TTSCCHHHHHHHHHHHHHSS----CSE--EEEESSHHH
T ss_pred CEEEEccccccccccC--CCCHHHHHHHHHHHHhc-cc-cc-CccCCHHHHHHHHHHHhhCC----CCe--EEEeCCHHH
Confidence 3467887763211112 245677777655 3221 11 11 11222344444444322211 233 578999999
Q ss_pred HHHHHHHHHhhhC-----CC-CeEEEcCCCCcchHH-HHHhcCce------------eeEeeeccCCCCCCChHHHHHHH
Q 047180 130 ACRLFADFQKRFH-----PD-SQIYIPVPTWSNHHN-IWRDAHVT------------QRTFHYYHPGTKGLDFAALMDDI 190 (337)
Q Consensus 130 al~~~~~~l~~~~-----pg-d~Vlv~~P~y~~y~~-~~~~~G~~------------~~~~~~~~~~~~~~d~~~l~~~l 190 (337)
|+.+++.++.... +| ++|++++|+|+.+.. .+...|.+ ++.+|. .|++.+++.+
T Consensus 126 A~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i 198 (420)
T 2pb2_A 126 ANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVM 198 (420)
T ss_dssp HHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHC
T ss_pred HHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHh
Confidence 9999987765321 46 599999999988754 45556654 233322 3789999888
Q ss_pred HcCCCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecc
Q 047180 191 KNAPNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSY 269 (337)
Q Consensus 191 ~~~~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 269 (337)
.+ +..+++.+++|||+|. +++.+++++|+++|+++|+++|+||+|.+|.... .......+ ....+++ ||
T Consensus 199 ~~---~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g---~~~~~~~~-~~~~dii---t~ 268 (420)
T 2pb2_A 199 DD---HTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTG---DLFAYMHY-GVTPDIL---TS 268 (420)
T ss_dssp CT---TEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSHHHHH-TCCCSEE---EE
T ss_pred cc---CceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCC---cHHHHHhc-CCCCCeE---Ee
Confidence 52 3444444778888884 6999999999999999999999999998875321 11111112 2234444 78
Q ss_pred cccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 270 AKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 270 SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
||.++ +|+|+||+++ ++++++.+... ....++ +.+.++|.++..+|+
T Consensus 269 sK~l~-~G~~iG~~~~---~~~l~~~l~~~---~~~~t~-~~~~~~~aa~~a~L~ 315 (420)
T 2pb2_A 269 AKALG-GGFPVSAMLT---TQEIASAFHVG---SHGSTY-GGNPLACAVAGAAFD 315 (420)
T ss_dssp CGGGG-TTSCCEEEEE---CHHHHTTCC-------CCEE-CCCHHHHHHHHHHHH
T ss_pred ccccc-CCCceEEEEE---hHHHHHhhcCC---CcCccc-CcCHHHHHHHHHHHH
Confidence 99999 8999999986 34443333210 012233 467788888777665
No 147
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.82 E-value=7.1e-20 Score=176.46 Aligned_cols=247 Identities=11% Similarity=0.029 Sum_probs=145.9
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcC--CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTA--NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
..+|+..|.....-| + .+|.+.+|+.+ +.... ..+|.. ....++++.+++++ +. +.++ +++|+||+
T Consensus 44 ~~lD~~~~~~~~~lG-~-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~-~~-----~~~~--v~~~~gg~ 112 (433)
T 1zod_A 44 AILDFTSGQMSAVLG-H-CHPEIVSVIGEYAGKLDHLFSEMLS-RPVVDLATRLANIT-PP-----GLDR--ALLLSTGA 112 (433)
T ss_dssp EEEETTHHHHTCTTC-B-TCHHHHHHHHHHHHHCCCCCTTCCC-HHHHHHHHHHHHHS-CT-----TCCE--EEEESCHH
T ss_pred EEEEcccchhccccC-C-CCHHHHHHHHHHHHhCcccccccCC-HHHHHHHHHHHHhC-CC-----CcCE--EEEeCchH
Confidence 467887664321112 1 35667776654 32111 122321 12234555555543 21 1333 57899999
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhc--------------CceeeEeeeccCCCCC--------CChHHH
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDA--------------HVTQRTFHYYHPGTKG--------LDFAAL 186 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~--------------G~~~~~~~~~~~~~~~--------~d~~~l 186 (337)
+|+.++++++.....+|+|++++|+|+.+....... |...+++|......+. +|++.+
T Consensus 113 ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l 192 (433)
T 1zod_A 113 ESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYA 192 (433)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHH
Confidence 999999875432214589999999998875543321 3334333321000111 368899
Q ss_pred HHHHHcCC-CCeEEEEeCCC-CCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeE
Q 047180 187 MDDIKNAP-NGSFFLLHACA-HNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLL 263 (337)
Q Consensus 187 ~~~l~~~~-~~~~ili~~~p-~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (337)
++.+++.. .+..+++ ++| |||||. +++++++++|+++|++||++||+||+|.+|.... .......+ ....+
T Consensus 193 e~~l~~~~~~~~~~vi-~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g---~~~~~~~~-~~~~d- 266 (433)
T 1zod_A 193 FDLIDRQSSGNLAAFI-AEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTG---TMFACQRD-GVTPD- 266 (433)
T ss_dssp HHHHHHHCCSCEEEEE-ECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHHH-TCCCS-
T ss_pred HHHHHhcCCCCeEEEE-EccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCc---hHhHHhhc-CCCCC-
Confidence 98886421 2334444 345 588995 6899999999999999999999999999885311 10111111 22233
Q ss_pred EEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhc-ccccCCChhHHHHHHHHhC
Q 047180 264 GLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLAR-PMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 264 i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~q~~~~~~l~ 324 (337)
+.||||.||. |+|+||+++ ++++++.+... .... .++ +.+.++|.++..+|+
T Consensus 267 --i~s~sK~~~~-G~~ig~~~~---~~~~~~~~~~~--~~~~~~t~-~~~~~~~~a~~aal~ 319 (433)
T 1zod_A 267 --ILTLSKTLGA-GLPLAAIVT---SAAIEERAHEL--GYLFYTTH-VSDPLPAAVGLRVLD 319 (433)
T ss_dssp --EEEECHHHHT-TSSCEEEEE---CHHHHHHHHHT--TCCCCCTT-TTCHHHHHHHHHHHH
T ss_pred --EEEecccccC-CCCeeEEEE---hHHHHHhhccC--CCCCCCCC-CcCHHHHHHHHHHHH
Confidence 3489999996 999999986 45555555331 1111 233 457788888777775
No 148
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.82 E-value=1.5e-19 Score=175.81 Aligned_cols=248 Identities=12% Similarity=0.001 Sum_probs=148.2
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
..+|++.|.....-| ..+|.|.+|+.+ +... ..|....|..+.+.++++++...... -..+ .+++|+||++|
T Consensus 65 ~ylD~~~~~~~~~lG--h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~--~v~~~~sGseA 137 (453)
T 4ffc_A 65 SFIDLGAGIAVTTVG--ASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPG-DHDK--RTALFNSGAEA 137 (453)
T ss_dssp EEEESSHHHHTCTTC--TTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSC-SSCE--EEEEESSHHHH
T ss_pred EEEEcCCCcccCcCC--CCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCC-CCCc--EEEEeCcHHHH
Confidence 457776653221112 135677776554 4221 23554456666677777666433211 0122 36889999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCc--------------eeeEeeeccC--CCCCCC--------hHHH
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHV--------------TQRTFHYYHP--GTKGLD--------FAAL 186 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~--------------~~~~~~~~~~--~~~~~d--------~~~l 186 (337)
+..++.++.....+++|++.+|+|+.+.......+. .+..+|+... +.++.+ ++.+
T Consensus 138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 217 (453)
T 4ffc_A 138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI 217 (453)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence 999986654322468999999999988765544322 2333443210 123343 2334
Q ss_pred HHHHHcCCCCeEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEE
Q 047180 187 MDDIKNAPNGSFFLLHACAHNPTG--VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLG 264 (337)
Q Consensus 187 ~~~l~~~~~~~~ili~~~p~NPTG--~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i 264 (337)
++.+. +.+..+++ ++|+||+| .+++++.+++|+++|++||+++|+||+|.+|.... .......+ ....+
T Consensus 218 ~~~i~--~~~~aavi-~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g---~~~a~~~~-~~~pd-- 288 (453)
T 4ffc_A 218 ETQIG--AQSLAAII-IEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTG---AWFASEHE-GIVPD-- 288 (453)
T ss_dssp HHHTC--GGGEEEEE-ECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSTHHHH-TCCCS--
T ss_pred HHhcC--CCCEEEEE-EcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCccc---ccchhhhc-CCCcc--
Confidence 43332 23344444 57899988 55688999999999999999999999999885310 11111111 11122
Q ss_pred EEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 265 LAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 265 ~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+.+|||.++. |||+||+++ ++++++ .+.........+.+.++|.++..+|+
T Consensus 289 -i~t~sK~~~~-G~~~G~~~~---~~~i~~----~~~~~~~~~t~~~~~~~~aaa~aal~ 339 (453)
T 4ffc_A 289 -IVTMAKGIAG-GMPLSAVTG---RAELMD----AVYAGGLGGTYGGNPVTCAAAVAALG 339 (453)
T ss_dssp -EEEECGGGGT-TSSCEEEEE---EHHHHT----TSCTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred -hHhhhhhhcC-CcCeEEEEE---CHHHHh----hhcccCcCCCCCcCHHHHHHHHHHHH
Confidence 4579999997 999999876 344333 33332222333567889988888876
No 149
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.82 E-value=1.9e-19 Score=169.70 Aligned_cols=201 Identities=11% Similarity=-0.011 Sum_probs=145.6
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGAC 131 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al 131 (337)
..+||+.|. |...+ +.+++.+.... ..|.+..+..+|++++++++ +.. .++.|.||++|+
T Consensus 7 ~~~~l~~~~-------~~~~~-~~~~~~~~~~~--~~~~~~~~~~~l~~~la~~~-~~~---------~~~~~~~gt~a~ 66 (374)
T 3uwc_A 7 PYSYLERQF-------ADIEP-YLNDLREFIKT--ADFTLGAELEKFEKRFAALH-NAP---------HAIGVGTGTDAL 66 (374)
T ss_dssp CSCCHHHHT-------SSCHH-HHHHHHHHHHH--TCCSSCHHHHHHHHHHHHHT-TCS---------EEEEESCHHHHH
T ss_pred eeeccccCC-------CCchH-HHHHHHHHHHc--CCcccChhHHHHHHHHHHHh-CCC---------cEEEeCCHHHHH
Confidence 457777764 22333 66666553111 24777788999999999987 221 246788999999
Q ss_pred HHHHHHH-hhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCC
Q 047180 132 RLFADFQ-KRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTG 210 (337)
Q Consensus 132 ~~~~~~l-~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG 210 (337)
.+++..+ .. +||+|+++.|+|+.+...++..|++++.+++. +++.+|++.+++.+.+ +..+++ |+||||
T Consensus 67 ~~~~~~~~~~--~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~---~~~~v~---~~n~~G 136 (374)
T 3uwc_A 67 AMSFKMLNIG--AGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITD---KTKAIM---PVHYTG 136 (374)
T ss_dssp HHHHHHTTCC--TTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCT---TEEEEC---CBCGGG
T ss_pred HHHHHHcCCC--CCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCC---CceEEE---EeCCcC
Confidence 9988877 44 89999999999999999999999999999884 3688999999887752 344444 799999
Q ss_pred CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccc--ccccccccccceeEeeeC
Q 047180 211 VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYA--KNMGLYGQRVGCLSVLCE 288 (337)
Q Consensus 211 ~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RvG~~~~~~~ 288 (337)
.+.+ +++|+++|+++|+++|+||+|..+.. +... . .... ..+++.||| |.++.+|. .|+++. +
T Consensus 137 ~~~~---~~~i~~~~~~~~~~li~D~~~~~g~~--~~~~--~---~~~~--~d~~~~s~~~~K~l~~~g~-~g~~~~--~ 201 (374)
T 3uwc_A 137 NIAD---MPALAKIAKKHNLHIVEDACQTILGR--INDK--F---VGSW--GQFACFSLHPLKNLNVWSD-AGVIIT--H 201 (374)
T ss_dssp CCCC---HHHHHHHHHHTTCEEEEECTTCTTCE--ETTE--E---TTSS--SSEEEEECSSSSSSCCSSC-CEEEEE--S
T ss_pred CcCC---HHHHHHHHHHcCCEEEEeCCCccCce--eCCe--e---cccc--ccEEEEeCCCCCcCCccce-eEEEEe--C
Confidence 9876 77788999999999999999986531 1100 0 1111 135667766 99986576 788765 5
Q ss_pred CHHHHHHHH
Q 047180 289 DEKQAVAVK 297 (337)
Q Consensus 289 ~~~~~~~~~ 297 (337)
++++.+++.
T Consensus 202 ~~~~~~~~~ 210 (374)
T 3uwc_A 202 SDEYAEKLR 210 (374)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 666655544
No 150
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.82 E-value=1.8e-19 Score=171.47 Aligned_cols=239 Identities=11% Similarity=0.044 Sum_probs=146.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|.+.+.-| ..+|.+.+|+.+ +.. ..+.| ..+..++++++++++....+ .++ ++.|+||++
T Consensus 36 ~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~-~~~~~--~~~~~~~~~~l~~~la~~~~----~~~--v~~~~gg~e 104 (395)
T 3nx3_A 36 KKYLDFSSGIGVCALG--YNHAKFNAKIKAQVDK-LLHTS--NLYYNENIAAAAKNLAKASA----LER--VFFTNSGTE 104 (395)
T ss_dssp CEEEESSHHHHTCTTC--BSCHHHHHHHHHHHTT-CSCCC--TTSBCHHHHHHHHHHHHHHT----CSE--EEEESSHHH
T ss_pred CEEEECCCcHHhccCC--CCCHHHHHHHHHHHHh-ccccc--cccCCHHHHHHHHHHHHhcC----CCe--EEEeCCHHH
Confidence 3578888774321112 245777777655 322 12222 22333455555555433211 233 578999999
Q ss_pred HHHHHHHHHhhh-----CCCCeEEEcCCCCcchHHHHHhcCc-------------eeeEeeeccCCCCCCChHHHHHHHH
Q 047180 130 ACRLFADFQKRF-----HPDSQIYIPVPTWSNHHNIWRDAHV-------------TQRTFHYYHPGTKGLDFAALMDDIK 191 (337)
Q Consensus 130 al~~~~~~l~~~-----~pgd~Vlv~~P~y~~y~~~~~~~G~-------------~~~~~~~~~~~~~~~d~~~l~~~l~ 191 (337)
|+..++.++... .++|+|++++|+|+.+.......+. ++..+|. .|++++++.++
T Consensus 105 a~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~ 177 (395)
T 3nx3_A 105 SIEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVN 177 (395)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCC
T ss_pred HHHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhcc
Confidence 999988766543 3579999999999988655544332 2222221 27888888775
Q ss_pred cCCCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccc
Q 047180 192 NAPNGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYA 270 (337)
Q Consensus 192 ~~~~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 270 (337)
++..++++.+ ++||+|.+ ++++++++|+++|++||+++|+||+|.+|.... .......+ . ...-+.|||
T Consensus 178 --~~~~~v~~~~-~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g---~~~~~~~~-~---~~~d~~t~s 247 (395)
T 3nx3_A 178 --EKTCAIILES-VQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSG---KFFAYEHA-Q---ILPDIMTSA 247 (395)
T ss_dssp --TTEEEEEEES-EECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTS---SSSGGGGG-T---CCCSEEEEC
T ss_pred --CCeEEEEEeC-ccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCC---cchhHHhc-C---CCCCEEEec
Confidence 2345566655 55566655 899999999999999999999999999885310 00111111 1 112245799
Q ss_pred ccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 271 KNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 271 K~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
|.|+. |+|+||+++ ++++ +.+.+.........+.+.++|.++..+|+
T Consensus 248 K~~~~-G~~~G~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~aa~aal~ 294 (395)
T 3nx3_A 248 KALGC-GLSVGAFVI---NQKV---ASNSLEAGDHGSTYGGNPLVCAGVNAVFE 294 (395)
T ss_dssp GGGTT-TSCCEEEEE---CHHH---HHHHSCTTCCSSCBSCCHHHHHHHHHHHH
T ss_pred ccccC-CCceEEEEE---chhh---hhhhcCCcccCCCCCCCHHHHHHHHHHHH
Confidence 99995 999999986 3443 03333332222223467888888888876
No 151
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.82 E-value=3.4e-19 Score=171.63 Aligned_cols=249 Identities=9% Similarity=-0.002 Sum_probs=149.8
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcC---CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccc
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTA---NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSG 127 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~---~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~ 127 (337)
..+|++.|.+...-+ ..+|.+.+|+.+ +.... ..+|.. ....++++.+++++ +. +.++ ++.|+||
T Consensus 44 ~ylD~~~~~~~~~lg--~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~-~~-----~~~~--v~~~~gg 112 (429)
T 1s0a_A 44 RLVDGMSSWWAAIHG--YNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT-PQ-----PLEC--VFLADSG 112 (429)
T ss_dssp EEEESSTTTTTCTTC--BSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS-CT-----TCCE--EEEESSH
T ss_pred EEEEcCccHhhccCC--CCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC-CC-----CCCE--EEEeCCH
Confidence 457776664211111 145777777654 32111 113422 22356777777765 21 2343 5789999
Q ss_pred hhHHHHHHHHHhhh-----CCCCeEEEcCCCCcchHHHHH-hcC---------------ceeeEeeecc-CCCC-CCChH
Q 047180 128 TGACRLFADFQKRF-----HPDSQIYIPVPTWSNHHNIWR-DAH---------------VTQRTFHYYH-PGTK-GLDFA 184 (337)
Q Consensus 128 ~~al~~~~~~l~~~-----~pgd~Vlv~~P~y~~y~~~~~-~~G---------------~~~~~~~~~~-~~~~-~~d~~ 184 (337)
++++.+++.++..+ .|||+|++++|+|+.+..... ..| ...++++... ...+ .+|++
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 192 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence 99999988755321 158999999999998755332 222 2333333210 1123 47899
Q ss_pred HHHHHHHcCCCCeEEEEeCCC--CCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCC
Q 047180 185 ALMDDIKNAPNGSFFLLHACA--HNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGH 261 (337)
Q Consensus 185 ~l~~~l~~~~~~~~ili~~~p--~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 261 (337)
.+++.+++.+.+..+++ ++| |||||. +++++++++|+++|+++|+++|+||+|.+|.... . ......+ ....
T Consensus 193 ~l~~~l~~~~~~~~~vi-~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g--~-~~~~~~~-~~~~ 267 (429)
T 1s0a_A 193 GFARLMAAHRHEIAAVI-IEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTG--K-LFACEHA-EIAP 267 (429)
T ss_dssp HHHHHHHHHTTTEEEEE-ECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTS--S-SSGGGGG-TCCC
T ss_pred HHHHHHHhCCCCEEEEE-EeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccc--h-HHHhhhc-CCCC
Confidence 99998874223344444 445 699995 6689999999999999999999999999875311 0 0011111 2223
Q ss_pred eEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHH-Hh-hhcccccCCChhHHHHHHHHhC
Q 047180 262 LLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQL-QQ-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 262 ~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l-~~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+++ ||||.|+ +| +|+||+++ ++++++.+.... .. ....++ +.+.++|.++..+|+
T Consensus 268 d~~---t~sK~l~-~G~~~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~-~~n~~~~~a~~aal~ 325 (429)
T 1s0a_A 268 DIL---CLGKALT-GGTMTLSATLT---TREVAETISNGEAGCFMHGPTF-MGNPLACAAANASLA 325 (429)
T ss_dssp SEE---EECGGGG-TSSSCCEEEEE---CHHHHHHHHTSTTSSCSCCCTT-TTCHHHHHHHHHHHH
T ss_pred CEE---Eeccccc-CCCccceEEEe---CHHHHHHhhcCCCcccccCCCC-CCCHHHHHHHHHHHH
Confidence 433 7999999 58 99999986 455544443200 00 011233 457788888877775
No 152
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.82 E-value=5.1e-20 Score=171.43 Aligned_cols=194 Identities=14% Similarity=0.029 Sum_probs=134.4
Q ss_pred ccchHHHHHHHHhcCcCCCCCC-CCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeE
Q 047180 69 VVLECVREAERRIAGTANMEYL-PMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQI 147 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~-~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~V 147 (337)
.+++.+.+++.+.... +.|. ...+..++|+++++++ +.. .+++ .+++|+||++++.+++..+. . |+|
T Consensus 10 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~-g~~---~~~~--~v~~t~g~t~a~~~~~~~~~---~-d~v 77 (353)
T 2yrr_A 10 PIPERVQKALLRPMRG--HLDPEVLRVNRAIQERLAALF-DPG---EGAL--VAALAGSGSLGMEAGLANLD---R-GPV 77 (353)
T ss_dssp CCCHHHHGGGGSCCCC--TTCHHHHHHHHHHHHHHHHHH-CCC---TTCE--EEEESSCHHHHHHHHHHTCS---C-CCE
T ss_pred CCCHHHHHHHhccccc--ccCHHHHHHHHHHHHHHHHHh-CCC---CCCc--eEEEcCCcHHHHHHHHHHhc---C-CcE
Confidence 3556677765542111 2232 1245788999999987 321 1123 35789999999999887664 3 899
Q ss_pred EEcCCCCcch--HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 148 YIPVPTWSNH--HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 148 lv~~P~y~~y--~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
++++|.|+.+ ...++..|++++.+|+. + ++.+|++.+++.+++. +.++++ +++||||||.+++ +++|+++|
T Consensus 78 l~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~l~~~-~~~~v~-~~~~~nptG~~~~---~~~i~~l~ 150 (353)
T 2yrr_A 78 LVLVNGAFSQRVAEMAALHGLDPEVLDFP-P-GEPVDPEAVARALKRR-RYRMVA-LVHGETSTGVLNP---AEAIGALA 150 (353)
T ss_dssp EEEECSHHHHHHHHHHHHTTCCEEEEECC-T-TSCCCHHHHHHHHHHS-CCSEEE-EESEETTTTEECC---HHHHHHHH
T ss_pred EEEcCCCchHHHHHHHHHcCCceEEEeCC-C-CCCCCHHHHHHHHHhC-CCCEEE-EEccCCCcceecC---HHHHHHHH
Confidence 9999999985 45567889999999973 3 4679999999998742 234444 4899999999998 56888999
Q ss_pred HhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccc-ccccccccceeEeeeCCHHHHHHH
Q 047180 226 KAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKN-MGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 226 ~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+++|++||+||+|. +.. ...+ +..+ + ..+++.|++|. ++.+| +||+++ +++.++++
T Consensus 151 ~~~~~~li~D~a~~-~~~--~~~~---~~~~---~-~d~~~~s~~K~~~~~~g--~G~~~~---~~~~~~~l 207 (353)
T 2yrr_A 151 KEAGALFFLDAVTT-LGM--LPFS---MRAM---G-VDYAFTGSQKCLSAPPG--LAPIAA---SLEARKAF 207 (353)
T ss_dssp HHHTCEEEEECTTT-TTT--SCCC---HHHH---T-CSEEECCTTSTTCCCSS--CEEEEE---CHHHHHHC
T ss_pred HHcCCeEEEEcCcc-ccc--cccc---cccc---C-ceEEEecCcccccCCCc--eEEEEE---CHHHHHHh
Confidence 99999999999995 321 1111 2212 2 24677889995 56667 699986 45544433
No 153
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.81 E-value=8.7e-20 Score=173.79 Aligned_cols=211 Identities=15% Similarity=0.069 Sum_probs=138.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCCC---CCHH--HHH-----HHHHHHhCCCCcccccCce
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPMG---GSVK--MVE-----ETLKLAYGDNSEFIKDKRI 119 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~~---G~~~--lr~-----aia~~~~~~~~~~~~~~~i 119 (337)
...++|..|.. +. ++.+.+++.+. ......+|+... |.+. +++ .+++++ +. +++
T Consensus 23 ~~~i~~~~~~~------~~-~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~-g~-----~~~-- 87 (407)
T 2dkj_A 23 REGLELIASEN------FV-SKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALF-GA-----AWA-- 87 (407)
T ss_dssp HTSEECCTTCC------CC-CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH-TC-----SEE--
T ss_pred hcceeeccCCC------CC-CHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHh-CC-----Ccc--
Confidence 35789988752 22 67788877653 222235665433 6554 444 444543 32 122
Q ss_pred eEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch---HHHHHhcCceeeEeeec-cCCCCCCChHHHHHHHHcCCC
Q 047180 120 AAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH---HNIWRDAHVTQRTFHYY-HPGTKGLDFAALMDDIKNAPN 195 (337)
Q Consensus 120 ~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y---~~~~~~~G~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~ 195 (337)
.++.++ |++++.+++..+.. +||+|++++|+|+.| ...++..|.+++.+++. +++++.+|++.+++.+++. +
T Consensus 88 ~i~~~s-Gt~a~~~~~~~~~~--~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~ 163 (407)
T 2dkj_A 88 NVQPHS-GSQANMAVYMALME--PGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEH-R 163 (407)
T ss_dssp ECCCSS-HHHHHHHHHHHHCC--TTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHH-C
T ss_pred eEEecc-hHHHHHHHHHHhcC--CCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhc-C
Confidence 123444 45699998887754 899999999999998 45566677754444442 2235789999999988732 2
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC-CCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG-FASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
.+++++ ++|+|| .+.+ +++|+++|+++|+++|+||+|.. +.+.+... ..+ . ...+++.|||| +
T Consensus 164 ~~~v~~-~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~-----~~~-~--~~di~~~s~sK--~ 227 (407)
T 2dkj_A 164 PKVIVA-GASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHP-----NPL-P--YAHVVTSTTHK--T 227 (407)
T ss_dssp CSEEEE-CCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSC-----CCT-T--TCSEEEEESSG--G
T ss_pred CeEEEE-eccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccC-----Ccc-c--cccEEEEeccc--c
Confidence 345555 889998 4444 78999999999999999999987 53211100 001 1 24688899999 5
Q ss_pred ccccccceeEeeeCCHHHHHHHHH
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
++|+|+||+++ +++++++++..
T Consensus 228 l~g~~~G~~~~--~~~~~~~~l~~ 249 (407)
T 2dkj_A 228 LRGPRGGLILS--NDPELGKRIDK 249 (407)
T ss_dssp GCCCSCEEEEE--SCHHHHHHHHH
T ss_pred CCCCCceEEEE--CCHHHHHHHHh
Confidence 56999999986 44676666544
No 154
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.81 E-value=2.8e-19 Score=172.11 Aligned_cols=246 Identities=11% Similarity=-0.007 Sum_probs=145.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|.....-| ..+|.+.+|+.+ +......+| ..++++++++++..... ..++ ++.|+||++
T Consensus 52 ~~~lD~~~~~~~~~lG--~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~--v~~~~ggse 119 (427)
T 3fq8_A 52 NRYIDYVGTWGPAICG--HAHPEVIEALKVAMEKGTSFGA-----PCALENVLAEMVNDAVP---SIEM--VRFVNSGTE 119 (427)
T ss_dssp CEEEESSGGGTTCTTC--BTCHHHHHHHHHHHTTCSCCSS-----CCHHHHHHHHHHHHHST---TCSE--EEEESSHHH
T ss_pred CEEEECCCchhhhccC--CCCHHHHHHHHHHHHhCCCcCC-----CCHHHHHHHHHHHHhCC---CCCE--EEEeCCHHH
Confidence 4578888875322222 146777777655 433222223 23455555555533221 1333 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh-cCceee--EeeeccCCCCC------------CChHHHHHHHHcCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD-AHVTQR--TFHYYHPGTKG------------LDFAALMDDIKNAP 194 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~-~G~~~~--~~~~~~~~~~~------------~d~~~l~~~l~~~~ 194 (337)
++.+++.+......+++|++.+|+|+.+...+.. .|.... .+|... +.. -|++.+++.+++.+
T Consensus 120 a~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~le~~l~~~~ 197 (427)
T 3fq8_A 120 ACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSP--GVPKKTTANTLTTPYNDLEAVKALFAENP 197 (427)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCS--SSCHHHHTTEEEEETTCHHHHHHHHHHST
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCC--CCCCcccCceeecCCCCHHHHHHHHHhCC
Confidence 9999885433222468999999999876533322 222111 111100 000 18899999987654
Q ss_pred CCeEEEEeCCCCCCCCCCCC-HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc
Q 047180 195 NGSFFLLHACAHNPTGVDPS-EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM 273 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~~~s-~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 273 (337)
.+..+++.++++|++|.+.+ ++.+++|.++|++||++||+||+|.+| .. . .......+ ....+ +.||||.|
T Consensus 198 ~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~-g--~~~~~~~~-~~~~d---i~t~sK~~ 269 (427)
T 3fq8_A 198 GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RI-A--YGGVQEKF-GVTPD---LTTLGKII 269 (427)
T ss_dssp TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TT-B--TTHHHHHT-TCCCS---EEEECGGG
T ss_pred CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-cc-C--cchhhHhc-CCCCC---hhhhhhhh
Confidence 44555554556677776655 666999999999999999999999988 32 1 11111111 11122 46899999
Q ss_pred cccccccceeEeeeCCHHHHHHHHHHHHh-hhcccccCCChhHHHHHHHHhC
Q 047180 274 GLYGQRVGCLSVLCEDEKQAVAVKSQLQQ-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 274 ~~~G~RvG~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+ +|+|+||+++ ++++++.+... .. ....++ +.+.+++.++..+|+
T Consensus 270 ~-~G~~~G~~~~---~~~~~~~~~~~-~~~~~~~t~-~~~~~~~aa~~aal~ 315 (427)
T 3fq8_A 270 G-GGLPVGAYGG---KREIMQLVAPA-GPMYQAGTL-SGNPLAMTAGIKTLE 315 (427)
T ss_dssp G-TTSSCEEEEE---CHHHHTTBTTT-SSBCCCCTT-TTCHHHHHHHHHHHH
T ss_pred h-CCcceEEEEE---cHHHHHhhccC-CCccccCCC-CcCHHHHHHHHHHHH
Confidence 9 7999999875 55544433210 00 112223 457788888877774
No 155
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.81 E-value=1.9e-19 Score=171.62 Aligned_cols=195 Identities=15% Similarity=0.041 Sum_probs=140.5
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCC--CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH-hhhCCC
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGG--SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ-KRFHPD 144 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G--~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l-~~~~pg 144 (337)
|...+.+.+++.+.... +|.+..| ..+||+++++|+ +. + .+++|+||++++.+++..+ .. +|
T Consensus 8 p~~~~~v~~a~~~~~~~---~~~~~~g~~~~~l~~~la~~~-~~-------~--~v~~~~ggt~al~~~~~~l~~~--~g 72 (394)
T 1o69_A 8 PHMGGNELKYIEEVFKS---NYIAPLGEFVNRFEQSVKDYS-KS-------E--NALALNSATAALHLALRVAGVK--QD 72 (394)
T ss_dssp ----CCHHHHHHHHHHH---TTTSCTTHHHHHHHHHHHHHH-CC-------S--EEEEESCHHHHHHHHHHHTTCC--TT
T ss_pred CCCCHHHHHHHHHHHHc---CCccCCChHHHHHHHHHHHHh-CC-------C--cEEEeCCHHHHHHHHHHHcCCC--CC
Confidence 44456666666553111 3766678 889999999997 32 2 2578999999999999887 44 89
Q ss_pred CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC-CCeEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 047180 145 SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP-NGSFFLLHACAHNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 145 d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~ili~~~p~NPTG~~~s~~~~~~l~~ 223 (337)
|+|+++.|+|+.|...++..|++++.+++. +++.+|++.+++.+++.+ +.+++++ + ||||.. .++++|++
T Consensus 73 d~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~-~---~~~G~~---~~l~~i~~ 143 (394)
T 1o69_A 73 DIVLASSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALIL-T---HLYGNA---AKMDEIVE 143 (394)
T ss_dssp CEEEEESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEE-E---CGGGCC---CCHHHHHH
T ss_pred CEEEECCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEE-E---CCCCCh---hhHHHHHH
Confidence 999999999999999999999999999884 357899999999887532 2345554 3 389965 56788889
Q ss_pred HHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 224 QIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 224 ~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+|+++|+++|+||+|. ++.+.+ .. +.... -+.+.||||..+++|.|+||+++ +++++++++..
T Consensus 144 l~~~~~~~li~Dea~~~g~~~~~--~~------~~~~~--~~~~~s~s~~K~l~~~~~G~~~~--~~~~l~~~l~~ 207 (394)
T 1o69_A 144 ICKENDIVLIEDAAEALGSFYKN--KA------LGTFG--EFGVYSYNGNKIITTSGGGMLIG--KNKEKIEKARF 207 (394)
T ss_dssp HHHHTTCEEEEECTTCTTCEETT--EE------TTSSS--SEEEEECCTTSSSCCSSCEEEEE--SCHHHHHHHHH
T ss_pred HHHHcCCEEEEECcCcccceeCC--cc------ccccc--CcEEEEEeCCccCCCCCceEEEE--CCHHHHHHHHH
Confidence 9999999999999998 554321 10 00111 25567776666667889999986 45676666543
No 156
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.81 E-value=1.1e-19 Score=171.92 Aligned_cols=194 Identities=11% Similarity=-0.025 Sum_probs=134.0
Q ss_pred ccchHHHHHHHHhcCcCCCCCCC--CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCe
Q 047180 69 VVLECVREAERRIAGTANMEYLP--MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ 146 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~ 146 (337)
.+++.+.+|+.+- ....|.+ .....++++.+++++ +.. .++ .+++|+||++++.+++..+.. |||+
T Consensus 33 ~~~~~v~~a~~~~---~~~~~~~~~~~~~~~l~~~la~~~-~~~----~~~--~v~~~~gg~~al~~~~~~~~~--~gd~ 100 (393)
T 3kgw_A 33 NLAPRVLAAGSLR---MIGHMQKEMLQIMEEIKQGIQYVF-QTR----NPL--TLVVSGSGHCAMETALFNLLE--PGDS 100 (393)
T ss_dssp CCCHHHHHHTTCC---CCCTTSHHHHHHHHHHHHHHHHHH-TCC----CSE--EEEESCCTTTHHHHHHHHHCC--TTCE
T ss_pred CCCHHHHHHhccc---ccCcccHHHHHHHHHHHHHHHHHh-CCC----CCc--EEEEeCCcHHHHHHHHHhcCC--CCCE
Confidence 4566777765431 1112222 123456788888876 321 111 257899999999999887755 9999
Q ss_pred EEEcCCCCcc--hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 047180 147 IYIPVPTWSN--HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 147 Vlv~~P~y~~--y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~ 224 (337)
|+++.|+|.. +...++..|++++.+|+. . ++.+|++.+++.+++. +.+++++ ++||||||.+++ +++|.++
T Consensus 101 vl~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~-~~~~d~~~l~~~i~~~-~~~~v~~-~~~~nptG~~~~---l~~i~~l 173 (393)
T 3kgw_A 101 FLTGTNGIWGMRAAEIADRIGARVHQMIKK-P-GEHYTLQEVEEGLAQH-KPVLLFL-VHGESSTGVVQP---LDGFGEL 173 (393)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECC-T-TCCCCHHHHHHHHHHH-CCSEEEE-ESEETTTTEECC---CTTHHHH
T ss_pred EEEEeCCchhHHHHHHHHHcCCceEEEeCC-C-CCCCCHHHHHHHHhhC-CCcEEEE-eccCCcchhhcc---HHHHHHH
Confidence 9999998853 367788899999999973 3 4579999999998742 2344444 789999999998 7789999
Q ss_pred HHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc-cccccccceeEeeeCCHHHHHHH
Q 047180 225 IKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM-GLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 225 ~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
|+++|+++|+||+|...... +. + ......+++.|+||.+ |.+| +||+++ +++.++++
T Consensus 174 ~~~~~~~li~De~~~~g~~~-~~--------~-~~~~~d~~~~s~sK~~~~~~g--~g~~~~---~~~~~~~~ 231 (393)
T 3kgw_A 174 CHRYQCLLLVDSVASLGGVP-IY--------M-DQQGIDIMYSSSQKVLNAPPG--ISLISF---NDKAKYKV 231 (393)
T ss_dssp HHHTTCEEEEECTTTTTTSC-CC--------T-TTTTCCEEEEESSSTTCCCSS--CEEEEE---CHHHHHHH
T ss_pred HHHcCCEEEEECCccccCcc-cc--------h-hhcCCCEEEecCcccccCCCc--eeEEEE---CHHHHHHH
Confidence 99999999999998622110 10 0 0112457778999977 4444 899886 55555544
No 157
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.81 E-value=3.8e-19 Score=169.69 Aligned_cols=195 Identities=11% Similarity=0.010 Sum_probs=134.6
Q ss_pred ccchHHHHHHHHhcCcCCCCCCC--CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCe
Q 047180 69 VVLECVREAERRIAGTANMEYLP--MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ 146 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~--~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~ 146 (337)
.+++.+.+++.+ .....|.+ .....++++.+++++ +. +++.+ ++.|.|+++++.+++..+.. |||+
T Consensus 21 ~~~~~v~~a~~~---~~~~~~~~~~~~~~~~l~~~la~~~-g~-----~~~~~-~~~~~s~t~al~~~~~~l~~--~gd~ 88 (416)
T 3isl_A 21 EVDPRVLRVMST---PVVGQFDPAFTGIMNETMEMLRELF-QT-----KNRWA-YPIDGTSRAGIEAVLASVIE--PEDD 88 (416)
T ss_dssp CCCHHHHHHTTS---CCCCTTSHHHHHHHHHHHHHHHHHT-TC-----CCSEE-EEEESCHHHHHHHHHHHHCC--TTCE
T ss_pred CcCHHHHHHhcc---cCCCCccHHHHHHHHHHHHHHHHHh-CC-----CCCcE-EEecCcHHHHHHHHHHHhcC--CCCE
Confidence 355666665433 12223332 123456777777765 32 12322 34677888999999887755 9999
Q ss_pred EEEcCCCCcc--hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 047180 147 IYIPVPTWSN--HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 147 Vlv~~P~y~~--y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~ 224 (337)
|++++|+|+. +...++..|++++.+|+. . ++.+|++++++++++. +.++++ +++||||||.+++ +++|+++
T Consensus 89 Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~i~~~-~~~~v~-~~~~~nptG~~~~---l~~i~~l 161 (416)
T 3isl_A 89 VLIPIYGRFGYLLTEIAERYGANVHMLECE-W-GTVFDPEDIIREIKKV-KPKIVA-MVHGETSTGRIHP---LKAIGEA 161 (416)
T ss_dssp EEEEESSHHHHHHHHHHHHTTCEEEEEECC-T-TCCCCHHHHHHHHHHH-CCSEEE-EESEETTTTEECC---CHHHHHH
T ss_pred EEEecCCcccHHHHHHHHhcCCeeEEEecC-C-CCCCCHHHHHHHHhhC-CCcEEE-EEccCCCCceecC---HHHHHHH
Confidence 9999999997 777889999999999973 3 4678999999998732 234444 4889999999998 7789999
Q ss_pred HHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccc-ccccccccceeEeeeCCHHHHHHHH
Q 047180 225 IKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKN-MGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 225 ~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
|+++|+++|+|++|...... . + +.. ....+++.|++|. +|. .++|++++ +++.++++.
T Consensus 162 ~~~~~~~li~D~a~~~~~~~-~--~------~~~-~~~d~~~~s~~K~l~g~--~g~g~~~~---~~~~~~~~~ 220 (416)
T 3isl_A 162 CRTEDALFIVDAVATIGGCE-V--K------VDE-WKIDAAIGGTQKCLSVP--SGMAPITY---NERVADVIA 220 (416)
T ss_dssp HHHTTCEEEEECTTTTTTSC-C--C------TTT-TTCSEEECCSSSTTCCC--SSEEEEEE---CHHHHHHHH
T ss_pred HHHcCCEEEEECCccccCCC-c--c------hhh-cCCCEEEecCccccCCC--CCeEEEEE---CHHHHHHhh
Confidence 99999999999998632110 1 0 111 1245788999997 554 45899876 455555543
No 158
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.81 E-value=2.2e-19 Score=169.39 Aligned_cols=194 Identities=16% Similarity=0.140 Sum_probs=141.8
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH-hhhCCCCeE
Q 047180 69 VVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ-KRFHPDSQI 147 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l-~~~~pgd~V 147 (337)
...+.+.+++.+.... ..|.+..+..+|++++++++ +. + .++.|.||++|+.+++..+ .. +||+|
T Consensus 13 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~l~~~la~~~-~~-------~--~~~~~~sGt~al~~al~~~~~~--~gd~V 78 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRH--GQYILGPEVTELEDRLADFV-GA-------K--YCISCANGTDALQIVQMALGVG--PGDEV 78 (367)
T ss_dssp HHHHHHHHHHHHHHHH--CCCSSCHHHHHHHHHHHHHH-TC-------S--EEEEESCHHHHHHHHHHHTTCC--TTCEE
T ss_pred ccCHHHHHHHHHHHhc--CCccCChHHHHHHHHHHHHh-CC-------C--cEEEeCCHHHHHHHHHHHhCCC--CcCEE
Confidence 3456677766553111 24556667899999999997 22 1 2578999999999988776 34 89999
Q ss_pred EEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh
Q 047180 148 YIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKA 227 (337)
Q Consensus 148 lv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~ 227 (337)
+++.|+|+.+...++..|++++.+++ +++++.+|++.+++.++ ++..+++ |+||||...+ +++|.++|++
T Consensus 79 i~~~~~~~~~~~~~~~~G~~~~~~~~-~~~~~~~d~~~l~~~i~---~~~~~v~---~~~~~G~~~~---~~~i~~la~~ 148 (367)
T 3nyt_A 79 ITPGFTYVATAETVALLGAKPVYVDI-DPRTYNLDPQLLEAAIT---PRTKAII---PVSLYGQCAD---FDAINAIASK 148 (367)
T ss_dssp EEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCGGGTGGGCC---TTEEEEC---CBCGGGCCCC---HHHHHHHHHH
T ss_pred EECCCccHHHHHHHHHcCCEEEEEec-CCccCCcCHHHHHHhcC---cCCcEEE---eeCCccChhh---HHHHHHHHHH
Confidence 99999999999999999999999988 44458899999998874 2344444 7899997655 7778899999
Q ss_pred cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecc--cccccccccccceeEeeeCCHHHHHHHHH
Q 047180 228 KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSY--AKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 228 ~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~--SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+|+++|+|++|..... +.. .. +...+ -+++.|| +|.++.+|. .|+++. +++++.+++..
T Consensus 149 ~~~~li~D~a~~~g~~--~~~--~~---~~~~~--di~~~Sf~~~K~l~~~g~-gg~~~~--~~~~l~~~~~~ 209 (367)
T 3nyt_A 149 YGIPVIEDAAQSFGAS--YKG--KR---SCNLS--TVACTSFFPSAPLGCYGD-GGAIFT--NDDELATAIRQ 209 (367)
T ss_dssp TTCCBEEECTTTTTCE--ETT--EE---TTSSS--SEEEEECCTTSSSCCSSC-CEEEEE--SCHHHHHHHHH
T ss_pred cCCEEEEECccccCCe--ECC--ee---ccCCC--CEEEEECCCCCcCCCcCc-eeEEEe--CCHHHHHHHHH
Confidence 9999999999974321 110 00 11112 4777887 899997687 888775 56776665543
No 159
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.81 E-value=2.4e-19 Score=170.11 Aligned_cols=190 Identities=12% Similarity=-0.010 Sum_probs=140.5
Q ss_pred chHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH-hhhCCCCeEE
Q 047180 71 LECVREAERRI-AGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ-KRFHPDSQIY 148 (337)
Q Consensus 71 ~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l-~~~~pgd~Vl 148 (337)
++.+.+++.+. ... .|.+..+..+|++++++|+ +. + .+++|.||++++.+++..+ .. |||+|+
T Consensus 19 ~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~-~~-------~--~~~~~~~gt~al~~~~~~~~~~--~gd~Vl 83 (393)
T 1mdo_A 19 GAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLT-GN-------Q--YAVAVSSATAGMHIALMALGIG--EGDEVI 83 (393)
T ss_dssp CHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHH-CC-------S--EEEEESCHHHHHHHHHHHTTCC--TTCEEE
T ss_pred CHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHh-CC-------C--cEEEecChHHHHHHHHHHcCCC--CCCEEE
Confidence 35556665543 221 2445568899999999997 32 1 2578999999999999887 44 899999
Q ss_pred EcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 047180 149 IPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK 228 (337)
Q Consensus 149 v~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~ 228 (337)
+++|+|+.+...++..|++++.+++ +++++.+|++.+++.+++ +..+++.+ ||||.+.+ +++|+++|+++
T Consensus 84 ~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~~~d~~~l~~~l~~---~~~~v~~~---~~~G~~~~---~~~i~~l~~~~ 153 (393)
T 1mdo_A 84 TPSMTWVSTLNMIVLLGANPVMVDV-DRDTLMVTPEHIEAAITP---QTKAIIPV---HYAGAPAD---LDAIYALGERY 153 (393)
T ss_dssp EESSSCHHHHHHHHHTTCEEEEECB-CTTTCCBCHHHHHHHCCT---TEEEECCB---CGGGCCCC---HHHHHHHHHHH
T ss_pred eCCCccHhHHHHHHHCCCEEEEEec-cCCcCCCCHHHHHHhcCC---CceEEEEe---CCCCCcCC---HHHHHHHHHHc
Confidence 9999999999999999999999997 343577999999998853 34444433 59999875 78889999999
Q ss_pred CceeEEcccCCCC-CCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 229 GHFPFFDMAYQGF-ASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 229 ~~~ii~De~Y~~~-~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
++++|+|++|... .+. . . + +.. ..+++.||||+.+++|.|.||++. +++++++++..
T Consensus 154 ~~~li~D~a~~~g~~~~-~-~---~---~~~---~d~~~~S~~k~K~l~~~~~g~~~~--~~~~~~~~l~~ 211 (393)
T 1mdo_A 154 GIPVIEDAAHATGTSYK-G-R---H---IGA---RGTAIFSFHAIKNITCAEGGIVVT--DNPQFADKLRS 211 (393)
T ss_dssp TCCBCEECTTCTTCEET-T-E---E---TTS---SSEEEEECCTTSSSCSSSCEEEEE--SCHHHHHHHHH
T ss_pred CCeEEEECccccCCeEC-C-e---e---cCC---CCeEEEeCCCCCccccccceEEEe--CCHHHHHHHHH
Confidence 9999999999853 221 1 1 0 111 568889999555556779999876 45776666543
No 160
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.81 E-value=9.3e-20 Score=173.19 Aligned_cols=160 Identities=13% Similarity=0.034 Sum_probs=121.0
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh----hhCCCC-eEEEcCCCCcchHHHHHh---cCc
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK----RFHPDS-QIYIPVPTWSNHHNIWRD---AHV 166 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~----~~~pgd-~Vlv~~P~y~~y~~~~~~---~G~ 166 (337)
..++++.+++++ +. ++++ +++|+|+++++.+++..+. . ||| +|+++.|.|+.|...+.. .|+
T Consensus 65 ~~~l~~~la~~~-~~-----~~~~--v~~~~g~t~al~~~~~~l~~~~~~--~gd~~Vl~~~~~~~~~~~~~~~~~~~g~ 134 (400)
T 3vax_A 65 VERAREYLASTV-SA-----EPDE--LIFTSGATESNNIALLGLAPYGER--TGRRHIITSAIEHKAVLEPLEHLAGRGF 134 (400)
T ss_dssp HHHHHHHHHHHT-TC-----CGGG--EEEESCHHHHHHHHHHTTHHHHHH--HTCCEEEEETTSCHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHc-CC-----CCCc--EEEeCCHHHHHHHHHHHHHHhhcc--CCCCEEEECccccHhHHHHHHHHHhcCC
Confidence 456777777765 32 2344 5789999999999998775 5 899 999999999998766554 699
Q ss_pred eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCC
Q 047180 167 TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDP 246 (337)
Q Consensus 167 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~ 246 (337)
+++.+|+. + ++.+|++++++++. +++.++++++||||||.+++ +++|+++|+++|++||+||+|.... .
T Consensus 135 ~~~~v~~~-~-~~~~d~~~l~~~i~---~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~---~ 203 (400)
T 3vax_A 135 EVDFLTPG-P-SGRISVEGVMERLR---PDTLLVSLMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK---V 203 (400)
T ss_dssp EEEEECCC-T-TCCCCHHHHHTTCC---TTEEEEECCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT---S
T ss_pred eEEEEccC-C-CCCcCHHHHHHhcC---CCceEEEEECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC---C
Confidence 99999873 3 57889999998775 24566667999999999998 5788899999999999999997321 1
Q ss_pred ccchHHHHHhhhcCCeEEEEecccccccccccccceeE-e
Q 047180 247 ERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLS-V 285 (337)
Q Consensus 247 ~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~-~ 285 (337)
. . .+.. . ..+++.||||.+|++| +|+++ +
T Consensus 204 ~-----~-~~~~-~-~d~~~~s~~K~~g~~g--~g~~~~~ 233 (400)
T 3vax_A 204 P-----G-DLTT-P-IDMISISGHKIGAPKG--VGALVTR 233 (400)
T ss_dssp G-----G-GGGS-C-CSEEEEETGGGTSCSS--CEEEEEC
T ss_pred C-----c-Chhh-c-CcEEEEeHHHhCCCCc--eEEEEEe
Confidence 0 0 0111 1 3478899999888666 56666 5
No 161
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.80 E-value=6.5e-19 Score=172.38 Aligned_cols=172 Identities=15% Similarity=0.104 Sum_probs=127.1
Q ss_pred CCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh--CCCC-----eEEEcCCCCcchHHHHHhc
Q 047180 92 MGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF--HPDS-----QIYIPVPTWSNHHNIWRDA 164 (337)
Q Consensus 92 ~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~--~pgd-----~Vlv~~P~y~~y~~~~~~~ 164 (337)
.+|..++++.+++++....+. +. .+++|.||++++.+++.++... .+|| +|++++|+|+.|...++..
T Consensus 102 ~~g~~~l~~~l~~~la~~~g~--~~---~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~ 176 (474)
T 1wyu_B 102 AQGALRLMWELGEYLKALTGM--DA---ITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMA 176 (474)
T ss_dssp CHHHHHHHHHHHHHHHHHHTC--SE---EECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHT
T ss_pred ChHHHHHHHHHHHHHHHHHCC--Cc---eeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHC
Confidence 557778888888877443221 11 2467889999988755443211 1787 9999999999999999999
Q ss_pred CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCC
Q 047180 165 HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASG 244 (337)
Q Consensus 165 G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~ 244 (337)
|++++.+|+. + ++.+|+++|++++.+ +..+++.++| ||||.+. +++++|+++|+++|+++|+||+|.....+
T Consensus 177 G~~vv~v~~~-~-~~~~d~~~L~~~i~~---~t~~v~~~~p-n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g 248 (474)
T 1wyu_B 177 GYQVREIPSG-P-EGEVDLEALKRELGP---HVAALMLTNP-NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMG 248 (474)
T ss_dssp TCEEEEECBC-T-TSSBCHHHHHHHCST---TEEEEEECSS-CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTT
T ss_pred CCEEEEecCC-C-CCCcCHHHHHHhhCC---CceEEEEECC-CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhcc
Confidence 9999999973 3 578999999998852 3444444777 7999883 56899999999999999999999766532
Q ss_pred CCccchHHHHHhhhcCCeEEEEeccccccccc-c---cccceeEe
Q 047180 245 DPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY-G---QRVGCLSV 285 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~-G---~RvG~~~~ 285 (337)
.. . ...+ + ..+++.|++|+|+.| | +|+||+++
T Consensus 249 ~~--~---~~~~---g-~di~~~s~~K~~~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 249 WA--R---PGDM---G-FDVVHLNLHKTFTVPHGGGGPGSGPVGV 284 (474)
T ss_dssp TC--C---HHHH---T-CSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred CC--C---cccC---C-CcEEEEeCccccccCCCCCCCCeEEEEE
Confidence 11 1 1111 2 457778999999887 5 59999987
No 162
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.80 E-value=3.3e-18 Score=165.78 Aligned_cols=251 Identities=12% Similarity=0.006 Sum_probs=149.0
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCCCC-CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYLPM-GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~~~-~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
..+|++.|.....-+ + .+|.+.+|+.+. .... |... .+..++++.+++.+..... .+.++ +++|+||++
T Consensus 51 ~~lD~~~~~~~~~lG-~-~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~--v~~~~ggse 121 (449)
T 3a8u_X 51 KVYDSLSGLWTCGAG-H-TRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNH--VFFTDSGSE 121 (449)
T ss_dssp EEEETTHHHHTCTTC-B-SCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEE--EEEESSHHH
T ss_pred EEEECCccHhhccCC-C-CCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCE--EEEcCcHHH
Confidence 357776654211112 1 257788877653 2211 2222 3444566666666544321 12333 688999999
Q ss_pred HHHHHHHHHhhhC------CCCeEEEcCCCCcchH-HHHHhcC--------------ceeeEeee-ccCCCCCCC-----
Q 047180 130 ACRLFADFQKRFH------PDSQIYIPVPTWSNHH-NIWRDAH--------------VTQRTFHY-YHPGTKGLD----- 182 (337)
Q Consensus 130 al~~~~~~l~~~~------pgd~Vlv~~P~y~~y~-~~~~~~G--------------~~~~~~~~-~~~~~~~~d----- 182 (337)
|+.+++.++..+. ++|+|++++|+|+.+. ..+...| ...+++|. +...-.++|
T Consensus 122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~ 201 (449)
T 3a8u_X 122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG 201 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence 9999987664321 5799999999999874 3555544 23333332 011001356
Q ss_pred ---hHHHHHHHHcCC-CCeEEEEeCCCC-CCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHh
Q 047180 183 ---FAALMDDIKNAP-NGSFFLLHACAH-NPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIF 256 (337)
Q Consensus 183 ---~~~l~~~l~~~~-~~~~ili~~~p~-NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~ 256 (337)
++++++.+++.. .+.++++ ++|+ ||||. +.+++++++|.++|+++|+++|+||+|.+|... . . ......+
T Consensus 202 ~~~~~~le~~l~~~~~~~~~~vi-~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~-g-~-~~~~~~~ 277 (449)
T 3a8u_X 202 IALADELLKLIELHDASNIAAVF-VEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRT-G-S-MFGADSF 277 (449)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTT-S-S-SSHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCEEEEE-EcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCcccc-C-c-chhhhhc
Confidence 899998886421 2334444 4454 67996 678999999999999999999999999887531 0 1 1112212
Q ss_pred hhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHH-----Hh-hhcccccCCChhHHHHHHHHhC
Q 047180 257 LKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQL-----QQ-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 257 ~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l-----~~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
....+++ ||||.|+ +| +|+||+++ ++++++.+.... .. ....++ +.+.+++.++..+|+
T Consensus 278 -~~~~di~---s~sK~l~-~G~~~~G~~~~---~~~~~~~l~~~~~~~~~~~~~~~~t~-~~~~~~~aa~~aal~ 343 (449)
T 3a8u_X 278 -GVTPDLM---CIAKQVT-NGAIPMGAVIA---STEIYQTFMNQPTPEYAVEFPHGYTY-SAHPVACAAGLAALC 343 (449)
T ss_dssp -TCCCSEE---EECGGGG-TTSSCCEEEEE---EHHHHHHHHTCSSCTTSCSSCCCCTT-TTCHHHHHHHHHHHH
T ss_pred -CCCCCEE---EEccccc-CCCCceEEEEE---CHHHHHHhhccCcccccccccccCCC-cccHHHHHHHHHHHH
Confidence 2223433 8999999 48 99999876 345544443210 00 011223 456778877777775
No 163
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.80 E-value=4.3e-19 Score=172.51 Aligned_cols=250 Identities=10% Similarity=-0.052 Sum_probs=148.8
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
..+|++.|.....-| ..+|.+.+|+.+ +... ..|....+..+.+.++++++...... ...+ .+++|+||++|
T Consensus 62 ~ylD~~~~~~~~~lG--h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~--~v~~~~sGseA 134 (451)
T 3oks_A 62 RLIDLGSGIAVTTVG--NSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPV-RGDK--RSALFNSGSEA 134 (451)
T ss_dssp EEEESSHHHHTCTTC--TTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSE--EEEEESSHHHH
T ss_pred EEEEcCCCccccccC--CCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCc-CCCC--EEEEeCcHHHH
Confidence 456776653221112 135677776654 4322 23555556667777777776443211 0122 36889999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCc--------------eeeEeeecc--------CCCCCC---ChHH
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHV--------------TQRTFHYYH--------PGTKGL---DFAA 185 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~--------------~~~~~~~~~--------~~~~~~---d~~~ 185 (337)
+..++.++.....+++|++.+|+|+.+.......+. .++.+|+.. .+..++ +++.
T Consensus 135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 214 (451)
T 3oks_A 135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR 214 (451)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence 999987654322458999999999988765544322 233444310 000111 2444
Q ss_pred HHHHHHc--CCCCeEEEEeCCCCCCCC--CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCC
Q 047180 186 LMDDIKN--APNGSFFLLHACAHNPTG--VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGH 261 (337)
Q Consensus 186 l~~~l~~--~~~~~~ili~~~p~NPTG--~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~ 261 (337)
+++.+.+ .+.+..+++ ++|.||+| .+++++.+++|+++|++||++||+||+|.+|... . .......+ ....
T Consensus 215 ~~~~l~~~~~~~~~aavi-~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~-g--~~~~~~~~-~~~p 289 (451)
T 3oks_A 215 AITVIDKQIGADNLAAVV-IEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFART-G--AMFACEHE-GIDP 289 (451)
T ss_dssp HHHHHHHHTCGGGEEEEE-ECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-S--SSSGGGGG-TCCC
T ss_pred HHHHHHhhcCCCCEEEEE-EcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcc-c--cchhhhhc-CCCC
Confidence 4455542 123344444 56788877 4558888999999999999999999999988531 1 11111111 1122
Q ss_pred eEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 262 LLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 262 ~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
++ .||||.++. |||+||+++ ++++++ .+.........+.+.++|.++..+|+
T Consensus 290 di---~t~sK~l~~-G~~iG~v~~---~~~~~~----~~~~~~~~~t~~~~~~~~aaa~aal~ 341 (451)
T 3oks_A 290 DL---IVTAKGIAG-GLPLSAVTG---RAEIMD----SPHVSGLGGTYGGNPIACAAALATIE 341 (451)
T ss_dssp SE---EEECGGGGT-TSSCEEEEE---EHHHHT----CSCTTSBCCSSSSCHHHHHHHHHHHH
T ss_pred Ce---eeehhhhhC-CcceEEEEE---CHHHHh----hhcCCCcCCCCCCCHHHHHHHHHHHH
Confidence 33 389999996 999999876 344333 33322222233567889988888886
No 164
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.80 E-value=1.9e-19 Score=168.67 Aligned_cols=198 Identities=15% Similarity=0.022 Sum_probs=130.4
Q ss_pred cchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCe--E
Q 047180 70 VLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ--I 147 (337)
Q Consensus 70 ~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~--V 147 (337)
++|.+.+|+.+. -....|++..+..+|++.+++++ +.. . .++++||++++.+++..+.. +||. |
T Consensus 27 ~~p~v~~ai~~~--~~~~~~~~~~~~~~l~~~la~~~-~~~-------~--~i~~~~g~~a~~~a~~~~~~--~g~~~vv 92 (359)
T 3pj0_A 27 VLTEALQNIDDN--LESDIYGNGAVIEDFETKIAKIL-GKQ-------S--AVFFPSGTMAQQIALRIWAD--RKENRRV 92 (359)
T ss_dssp HHHHHTTTSCTT--CBCCBTTBSHHHHHHHHHHHHHH-TCS-------E--EEEESCHHHHHHHHHHHHHH--HHTCCEE
T ss_pred CCHHHHHHHHhh--cccCcccCCHHHHHHHHHHHHHh-CCC-------c--EEEeCCHHHHHHHHHHHHHh--cCCCcEE
Confidence 456666655432 12345777678899999999986 321 1 14557888899888877766 7776 5
Q ss_pred EEcCCCCcchH---HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC-CCCCCHHHHHHHHH
Q 047180 148 YIPVPTWSNHH---NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT-GVDPSEEQWKEISY 223 (337)
Q Consensus 148 lv~~P~y~~y~---~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT-G~~~s~~~~~~l~~ 223 (337)
+++.|+++.+. ......|++++.++. + ++.+|++.+++. . ++.+++++ ++||||| |.+++.+++++|++
T Consensus 93 i~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~--~~~~d~~~l~~~-~--~~~~~v~~-~~p~n~~~G~~~~~~~l~~l~~ 165 (359)
T 3pj0_A 93 AYHPLSHLEIHEQDGLKELQQITPLLLGT-A--NQLLTIDDIKSL-R--EPVSSVLI-ELPQREIGGQLPAFEELEKISE 165 (359)
T ss_dssp EECTTCHHHHSSTTHHHHHHCCEEEECSC-T--TSCCCHHHHHTC-S--SCCSEEEE-ESSBGGGTSBCCCHHHHHHHHH
T ss_pred EEeccceeeehhcchHHHhcCceEEecCC-c--CCCcCHHHHHhc-c--CCceEEEE-EecccCCCcccCCHHHHHHHHH
Confidence 55555543322 223567999998876 2 478999999876 2 23345554 8899998 79999999999999
Q ss_pred HHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 224 QIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 224 ~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+|+++|++||+|++|..+... . .. .+...+.. ..+ +++.||||+|+.++. ||++ .++++++++..
T Consensus 166 ~~~~~~~~li~D~a~~~~~~~-~-~~-~~~~~~~~-~~d-~~~~s~sK~~~~~~g--g~~~---~~~~l~~~~~~ 230 (359)
T 3pj0_A 166 YCHEQGISLHLDGARLWEITP-F-YQ-KSAEEICA-LFD-SVYVSFYKGIGGIAG--AILA---GNDDFVQEAKI 230 (359)
T ss_dssp HHHHHTCEEEEEETTCGGGHH-H-HT-CCHHHHHT-TCS-EEEEESSSTTCCSSC--EEEE---ECHHHHHHHHH
T ss_pred HHHHcCCEEEEECcchhcchh-h-hC-CCHHHhhc-cCC-EEEEeccccCCCcce--EEEE---CCHHHHHHHHH
Confidence 999999999999998654210 0 00 01122222 223 345689999986532 6655 36777666643
No 165
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.80 E-value=6.8e-19 Score=169.03 Aligned_cols=165 Identities=15% Similarity=0.079 Sum_probs=126.5
Q ss_pred CCCCCCC--CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH---
Q 047180 86 NMEYLPM--GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI--- 160 (337)
Q Consensus 86 ~~~Y~~~--~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~--- 160 (337)
.+.|+.. .+..++++.+++++ +. + .+++|.||++|+.+++..+.. +||+|+++.|.|+.+...
T Consensus 47 ~~~y~~~~~~~~~~l~~~la~~~-g~-------~--~~~~~~~gt~a~~~al~~l~~--~gd~vi~~~~~~~~~~~~~~~ 114 (412)
T 2cb1_A 47 GYVYARQKDPTAKALEERLKALE-GA-------L--EAVVLASGQAATFAALLALLR--PGDEVVAAKGLFGQTIGLFGQ 114 (412)
T ss_dssp SCSBTTTCCHHHHHHHHHHHHHH-TC-------S--EEEEESSHHHHHHHHHHTTCC--TTCEEEEETTCCHHHHHHHHH
T ss_pred CcCcCCCCChHHHHHHHHHHHHh-CC-------C--cEEEECCHHHHHHHHHHHHhC--CCCEEEEeCCCchhHHHHHHH
Confidence 4567654 34678999999987 22 1 257899999999999877654 899999999999876554
Q ss_pred -HHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC
Q 047180 161 -WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 161 -~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
++..|.+++.++. |++++++.+.+ +..+++.++||||||.+++ +++|+++|+++|+++|+||+|.
T Consensus 115 ~~~~~g~~~~~~~~--------~~~~l~~~i~~---~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~~~~~li~D~~~~ 180 (412)
T 2cb1_A 115 VLSLMGVTVRYVDP--------EPEAVREALSA---KTRAVFVETVANPALLVPD---LEALATLAEEAGVALVVDNTFG 180 (412)
T ss_dssp TTTTTTCEEEEECS--------SHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGG
T ss_pred HHHHcCCEEEEECC--------CHHHHHHHhcc---CCeEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEECCCc
Confidence 3457888887764 37888888752 3444555899999999996 8889999999999999999998
Q ss_pred CCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 240 GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
.+... . . +. . ....+++.|+||.++.+|+|+|++++.
T Consensus 181 ~~~~~-~-~---~~----~-~~~di~~~S~~K~~~~~~~~~G~~~~~ 217 (412)
T 2cb1_A 181 AAGAL-C-R---PL----A-WGAHVVVESLTKWASGHGSVLGGAVLS 217 (412)
T ss_dssp TTTTS-C-C---GG----G-GTCSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred ccccc-C-C---cc----c-cCCeEEEECCcccccCCCCcEEEEEEe
Confidence 76211 1 1 11 1 135688899999999999999999874
No 166
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.80 E-value=5.5e-19 Score=168.27 Aligned_cols=196 Identities=11% Similarity=0.011 Sum_probs=135.9
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCC--CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCe
Q 047180 69 VVLECVREAERRIAGTANMEYLPM--GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQ 146 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~ 146 (337)
.+++.+.+++.+. ....|.+. ....++++.+++++ +.. .+. .++.|.||++++.+++..+.. |||+
T Consensus 23 ~~~~~v~~a~~~~---~~~~~~~~~~~~~~~~~~~la~~~-~~~-----~~~-~v~~~~sgt~al~~~~~~~~~--~gd~ 90 (411)
T 3nnk_A 23 NADPRVLRAMSSQ---LIGQYDPAMTHYMNEVMALYRGVF-RTE-----NRW-TMLVDGTSRAGIEAILVSAIR--PGDK 90 (411)
T ss_dssp CCCHHHHHHHTSC---CCCTTCHHHHHHHHHHHHHHHHHH-TCC-----CSE-EEEEESCHHHHHHHHHHHHCC--TTCE
T ss_pred CCCHHHHHHhhcc---ccccccHHHHHHHHHHHHHHHHHh-CCC-----CCc-EEEECCCcHHHHHHHHHHhcC--CCCE
Confidence 3566777765431 11222221 22356777777775 321 222 256778889999999887755 9999
Q ss_pred EEEcCCCCcc--hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 047180 147 IYIPVPTWSN--HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 147 Vlv~~P~y~~--y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~ 224 (337)
|++++|+|+. |...++..|++++.+|+ +. ++.+|++.+++.+.+. +.+++++ ++||||||.+++ +++|+++
T Consensus 91 Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~~~i~~~-~~~~v~~-~~~~nptG~~~~---l~~i~~l 163 (411)
T 3nnk_A 91 VLVPVFGRFGHLLCEIARRCRAEVHTIEV-PW-GEVFTPDQVEDAVKRI-RPRLLLT-VQGDTSTTMLQP---LAELGEI 163 (411)
T ss_dssp EEEEECSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCHHHHHHHHHHH-CCSEEEE-ESEETTTTEECC---CTTHHHH
T ss_pred EEEecCCchHHHHHHHHHHcCCeEEEEec-CC-CCCCCHHHHHHHHhhC-CCeEEEE-eCCCCCcceecc---HHHHHHH
Confidence 9999999987 88999999999999997 32 5778999999998742 2345554 789999999988 7789999
Q ss_pred HHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHH
Q 047180 225 IKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 225 ~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
|+++|+++|+||++..-... + + +.. ....+++.|+||+++ .+.++||+++ +++.++++.
T Consensus 164 ~~~~~~~li~Dea~~~~~~~-~--~------~~~-~~~d~~~~s~~K~l~-~~~g~g~~~~---~~~~~~~~~ 222 (411)
T 3nnk_A 164 CRRYDALFYTDATASLGGNP-L--E------TDV-WGLDAVSAGMQKCLG-GPSGTSPITL---SARMEEAIR 222 (411)
T ss_dssp HHHHTCEEEEECTTTBTTBC-C--C------TTT-TTCSEEECCSTTTTC-CCSSEEEEEE---CHHHHHHHH
T ss_pred HHHcCCEEEEECCcccCCcc-c--c------hhc-cCCcEEEecCccccC-CCCceEEEEE---CHHHHHHHh
Confidence 99999999999997532110 1 0 111 124578899999843 2345899886 455555443
No 167
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.80 E-value=3.5e-19 Score=172.90 Aligned_cols=242 Identities=14% Similarity=0.044 Sum_probs=140.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|.....-+ ..+|.+.+|+.+ +... ..| .+..++++++++++..... ..++ +++|+||++
T Consensus 57 ~~~iD~~~~~~~~~lg--~~~~~v~~a~~~~~~~~--~~~---~~~~~~~~~la~~l~~~~~---~~~~--v~~~~gg~e 124 (453)
T 2cy8_A 57 NVYLDFFGGHGALVLG--HGHPRVNAAIAEALSHG--VQY---AASHPLEVRWAERIVAAFP---SIRK--LRFTGSGTE 124 (453)
T ss_dssp CEEEESCTTTTSCTTC--BTCHHHHHHHHHHHTTT--CSS---CSSCHHHHHHHHHHHHHCT---TCSE--EEEESCHHH
T ss_pred CEEEECcccHhhcccC--CCCHHHHHHHHHHHHhC--CCC---CCCCHHHHHHHHHHHhhCC---CCCE--EEEeCCHHH
Confidence 3468888774321112 256778877765 3332 123 2456899999999855431 2343 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh-c----------Cce------eeEeeeccCCCCCCChHHHHHHHHc
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD-A----------HVT------QRTFHYYHPGTKGLDFAALMDDIKN 192 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~-~----------G~~------~~~~~~~~~~~~~~d~~~l~~~l~~ 192 (337)
|+.+++.+...+.+++.|++.+|+|+.+...+.. . |.. ++.+| + .|++.+++.+++
T Consensus 125 A~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~------~-~d~~~le~~l~~ 197 (453)
T 2cy8_A 125 TTLLALRVARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIR------P-DDIEGMREVFAN 197 (453)
T ss_dssp HHHHHHHHHHHHHCCCEEEEECC----------------------------CGGGEEEEC------T-TCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecC------C-CCHHHHHHHHHh
Confidence 9999887621111467899999999987653322 2 221 22222 1 388999988864
Q ss_pred CCCCeEEEEeCCC-CCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccc
Q 047180 193 APNGSFFLLHACA-HNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYA 270 (337)
Q Consensus 193 ~~~~~~ili~~~p-~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 270 (337)
.+.+..+++ ++| +||||.+ .+++++++|.++|++||++||+||+|.+|..+ .......+ ....++ .|||
T Consensus 198 ~~~~~~~vi-~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g----~~~~~~~~-~~~~di---~s~s 268 (453)
T 2cy8_A 198 HGSDIAAFI-AEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGFRVG----NHGMQALL-DVQPDL---TCLA 268 (453)
T ss_dssp HGGGEEEEE-ECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTC----TTHHHHHH-TCCCSE---EEEE
T ss_pred cCCCEEEEE-ECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCccccccC----chhhhHHh-CCCCcE---EEEC
Confidence 222334444 344 4779975 58999999999999999999999999988322 11112111 222333 3899
Q ss_pred ccccccccccceeEeeeCCHHHHHHHHHH--HHhhhcccccCCChhHHHHHHHHhCC
Q 047180 271 KNMGLYGQRVGCLSVLCEDEKQAVAVKSQ--LQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 271 K~~~~~G~RvG~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
|.|+. |+|+||+++ ++++++.+... -......++ +.+.+++.++..+|+.
T Consensus 269 K~l~~-G~~~G~v~~---~~~~~~~l~~~~~~~~~~~~t~-~~n~~~~aa~~aal~~ 320 (453)
T 2cy8_A 269 KASAG-GLPGGILGG---REDVMGVLSRGSDRKVLHQGTF-TGNPITAAAAIAAIDT 320 (453)
T ss_dssp GGGGT-TSSCEEEEE---CHHHHTTSSSCC---------C-CCCHHHHHHHHHHHHH
T ss_pred hhhhC-CcceEEEec---hHHHHHHhccccCCCceeCCCC-CCCHHHHHHHHHHHHH
Confidence 99995 999999986 34444333210 000111223 4567788877776654
No 168
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.80 E-value=2.9e-18 Score=165.91 Aligned_cols=156 Identities=19% Similarity=0.132 Sum_probs=120.0
Q ss_pred eccchhHHHHHHHHHhhhCCCCeEEEcC-CCCcchHHHHH----------hcCceeeEeeeccCCCCCCChHHHHHHHHc
Q 047180 124 SLSGTGACRLFADFQKRFHPDSQIYIPV-PTWSNHHNIWR----------DAHVTQRTFHYYHPGTKGLDFAALMDDIKN 192 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~~~pgd~Vlv~~-P~y~~y~~~~~----------~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~ 192 (337)
+++|++|+..++..+.+ |||+|++++ |.|+.+...+. ..|++++.++.. + ++.+|++.+++++..
T Consensus 89 ~~sGt~Ai~~al~al~~--~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v~~~-~-~~~~d~e~l~~~l~~ 164 (431)
T 3ht4_A 89 IISGTHAISTALFGILR--PGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAVPLT-E-GGLVDFEAVAAAIHS 164 (431)
T ss_dssp SCSHHHHHHHHHHTTCC--TTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEECCBC-T-TSSBCHHHHHHHCCT
T ss_pred eeCHHHHHHHHHHHhCC--CCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEeCCC-C-CCCcCHHHHHhhcCC
Confidence 44778999988876655 999999999 99999986653 479999999873 3 478999999998863
Q ss_pred CCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh--cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccc
Q 047180 193 APNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKA--KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYA 270 (337)
Q Consensus 193 ~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~--~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 270 (337)
+.+++++.++||||||.+++.+++++|+++|++ +|+++|+||+|..+..+ . . +. ..+ ..+++.|||
T Consensus 165 --~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~-~--~--~~----~~g-~Di~~~S~s 232 (431)
T 3ht4_A 165 --NTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEE-Q--E--PC----HVG-ADLMAGSLI 232 (431)
T ss_dssp --TEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSS-C--C--GG----GTT-CSEEEEETT
T ss_pred --CCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccC-C--C--cc----ccC-CeEEEcCcc
Confidence 445666655899999999999999999999999 99999999999988642 1 1 11 111 248889999
Q ss_pred ccccc-cccccceeEeeeCCHHHHHHHHH
Q 047180 271 KNMGL-YGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 271 K~~~~-~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
|++|- .+..-||+++ ++++++++..
T Consensus 233 K~lgg~~~~~GG~v~~---~~~li~~l~~ 258 (431)
T 3ht4_A 233 KNPGGGIVKTGGYIVG---KEQYVEACAY 258 (431)
T ss_dssp SGGGTTTCSSCEEEEE---CHHHHHHHHH
T ss_pred ccCCCCCCCceEEEEe---cHHHHHHHHH
Confidence 99652 1133399875 5777666654
No 169
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.79 E-value=9.7e-19 Score=164.97 Aligned_cols=192 Identities=14% Similarity=0.052 Sum_probs=131.9
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCC--CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhh-hCCCC
Q 047180 69 VVLECVREAERRIAGTANMEYLPM--GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKR-FHPDS 145 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~--~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~-~~pgd 145 (337)
.+++.+.+++.+. ...+ |.|. .+..++++.+++++....+ .+++ .+++|+||++++.+++..+.. +.+||
T Consensus 15 ~~~~~v~~a~~~~--~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~--~v~~~~g~t~al~~~~~~~~~~~~~gd 87 (385)
T 2bkw_A 15 ILSGAVQKALDVP--SLGH-TSPEFVSIFQRVLKNTRAVFKSAAA--SKSQ--PFVLAGSGTLGWDIFASNFILSKAPNK 87 (385)
T ss_dssp CCCHHHHHTTSCC--CCCT-TSHHHHHHHHHHHHHHHHHTTCCGG--GTCE--EEEEESCTTHHHHHHHHHHSCTTCSCC
T ss_pred CchHHHHHHHhcc--cccc-CCHHHHHHHHHHHHHHHHHhCCCCC--CCCc--eEEEcCchHHHHHHHHHHHhccCCCCC
Confidence 3556666654432 1112 3332 2456788889988743211 2233 367899999999999987751 12899
Q ss_pred eEEEc-CCCCcchH-HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 047180 146 QIYIP-VPTWSNHH-NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 146 ~Vlv~-~P~y~~y~-~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~ 223 (337)
+|+++ .|+|+.+. ..++..|++++.+++. ..++.+|++.+++.+++. +.++++ +++||||||.+++ +++|++
T Consensus 88 ~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~-~~~~v~-~~~~~nptG~~~~---l~~i~~ 161 (385)
T 2bkw_A 88 NVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQN-SYGAVT-VTHVDTSTAVLSD---LKAISQ 161 (385)
T ss_dssp EEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHS-CCSEEE-EESEETTTTEECC---HHHHHH
T ss_pred eEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcC-CCCEEE-EEccCCCcCeEcC---HHHHHH
Confidence 99888 66777764 6778899999999872 225779999999998742 234544 4889999999998 668899
Q ss_pred HHHhc--CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccc-cccccccceeEe
Q 047180 224 QIKAK--GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNM-GLYGQRVGCLSV 285 (337)
Q Consensus 224 ~~~~~--~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RvG~~~~ 285 (337)
+|+++ |++||+||+|...... + + +... ...+++.|+||.+ |++|+ ||+++
T Consensus 162 ~~~~~~~~~~li~D~a~~~~~~~-~--~------~~~~-~~d~~~~s~~K~~~~~~G~--G~~~~ 214 (385)
T 2bkw_A 162 AIKQTSPETFFVVDAVCSIGCEE-F--E------FDEW-GVDFALTASQKAIGAPAGL--SISLC 214 (385)
T ss_dssp HHHHHCTTSEEEEECTTTTTTSC-C--C------TTTT-TCSEEEEESSSTTCCCSCE--EEEEE
T ss_pred HHHhhCCCCEEEEECccccCCcc-c--c------cccc-CceEEEecCccccccCCcc--eEEEE
Confidence 99999 9999999999632110 1 0 1111 2357889999965 56775 99886
No 170
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.79 E-value=4.9e-19 Score=166.78 Aligned_cols=151 Identities=14% Similarity=0.021 Sum_probs=112.7
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH--HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeE
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH--NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~--~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
++.|.||++++.+++..+.. |||+|++++|+|..+. ..++..|.+++.++.. . ++.+|++.+++.+. ++.++
T Consensus 74 i~~~~ggt~al~~~~~~~~~--~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~-~-~~~~d~~~l~~~~~--~~~~~ 147 (376)
T 3f0h_A 74 VFMTCSSTGSMEAVVMNCFT--KKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE-H-GKKLTKEKLYEYDN--QNFTG 147 (376)
T ss_dssp EEESSCHHHHHHHHHHHHCC--TTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC-T-TCCCCHHHHHTTTT--SCCCE
T ss_pred EEEcCChhHHHHHHHHhccC--CCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC-C-CCCCCHHHHHHhhc--cCceE
Confidence 45688889999999887765 9999999999776654 3567789999998873 2 57899999988654 23344
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc-ccc
Q 047180 199 FLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG-LYG 277 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G 277 (337)
++.++||||||.+++ +++|+++|+++|+++|+|++|...... + + .. ..+ ..+++.|+||.|+ ++|
T Consensus 148 -v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~-~--~---~~---~~~-~d~~~~s~~K~l~~~~G 213 (376)
T 3f0h_A 148 -LLVNVDETSTAVLYD---TMMIGEFCKKNNMFFVCDCVSAFLADP-F--N---MN---ECG-ADVMITGSQKVLACPPG 213 (376)
T ss_dssp -EEEESEETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSC-C--C---HH---HHT-CSEEEEETTTTTCCCSS
T ss_pred -EEEecccCCcceecC---HHHHHHHHHHcCCEEEEEcCccccCcc-c--c---cc---ccC-ccEEEecCcccccCCCc
Confidence 445889999999999 888999999999999999998765321 1 1 11 111 3477899999998 667
Q ss_pred cccceeEeeeCCHHHHHHH
Q 047180 278 QRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 278 ~RvG~~~~~~~~~~~~~~~ 296 (337)
+|++++ +++.++++
T Consensus 214 --~g~~~~---~~~~~~~~ 227 (376)
T 3f0h_A 214 --ISVIVL---APRGVERV 227 (376)
T ss_dssp --CEEEEE---CHHHHHHH
T ss_pred --eEEEEE---CHHHHHHh
Confidence 566654 56555544
No 171
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.79 E-value=7.3e-19 Score=170.56 Aligned_cols=249 Identities=9% Similarity=-0.041 Sum_probs=141.8
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|.....-| ..+|.+.+|+.+ +... ..|.+..+..+.++++++++...... ..++ ++.|+||++
T Consensus 44 ~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~--~~~~--v~~~~sGse 115 (448)
T 3dod_A 44 KEYYDGFSSVWLNVHG--HRKKELDDAIKKQLGKI--AHSTLLGMTNVPATQLAETLIDISPK--KLTR--VFYSDSGAE 115 (448)
T ss_dssp CEEEETTHHHHTCSSC--BSCHHHHHHHHHHHTTC--SCCCCSSSEEHHHHHHHHHHHHHSCT--TEEE--EEEESSHHH
T ss_pred CEEEECCcchhhccCC--CCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCE--EEEeCchHH
Confidence 3468887764322122 235777777655 4321 22334456667777777777543211 1233 678999999
Q ss_pred HHHHHHHHHhhh--CC----CCeEEEcCCCCcchHHHHHhcCce-------------eeEeeeccCCCCCC---------
Q 047180 130 ACRLFADFQKRF--HP----DSQIYIPVPTWSNHHNIWRDAHVT-------------QRTFHYYHPGTKGL--------- 181 (337)
Q Consensus 130 al~~~~~~l~~~--~p----gd~Vlv~~P~y~~y~~~~~~~G~~-------------~~~~~~~~~~~~~~--------- 181 (337)
|+..++.++... .+ +|+|++++|+|+.+.......+.. +..+|.. ..+..
T Consensus 116 A~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 193 (448)
T 3dod_A 116 AMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECR 193 (448)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhh
Confidence 999998776542 02 499999999999876544433321 2233321 12222
Q ss_pred --ChHHHHHHHHcCCCCeEEEEeCCCC-CCCC-CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh
Q 047180 182 --DFAALMDDIKNAPNGSFFLLHACAH-NPTG-VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL 257 (337)
Q Consensus 182 --d~~~l~~~l~~~~~~~~ili~~~p~-NPTG-~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~ 257 (337)
|++.+++.++..+.+..++++.+.+ ||+| .+++++.+++|+++|++||++||+||+|.+|... . . ......+
T Consensus 194 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~-g-~-~~a~~~~- 269 (448)
T 3dod_A 194 DQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRT-G-K-MFACEHE- 269 (448)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-S-S-SSGGGGG-
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcc-c-c-hhhhhhc-
Confidence 3788888886322333444434444 7777 5678999999999999999999999999988531 0 0 1111111
Q ss_pred hcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHHHh-------hhcccccCCChhHHHHHHHHhC
Q 047180 258 KDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQ-------LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 258 ~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
....+ +.+|||.++. | +|+||+++ ++++ .+.+.. .......+.+.++|.++..+|+
T Consensus 270 ~~~~d---i~t~sK~l~~-G~~~ig~v~~---~~~~----~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~ 333 (448)
T 3dod_A 270 NVQPD---LMAAGKGITG-GYLPIAVTFA---TEDI----YKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLA 333 (448)
T ss_dssp TCCCS---EEEECGGGGT-TSSCCEEEEE---EHHH----HHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHH
T ss_pred CCCCC---EEEecccccC-CcCceEEEEE---CHHH----HHHhhhccccCCcccccCCCCcCHHHHHHHHHHHH
Confidence 11223 3478999995 9 59999886 3443 333332 2122223467788888888886
No 172
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.78 E-value=5.1e-18 Score=164.93 Aligned_cols=172 Identities=12% Similarity=0.075 Sum_probs=119.0
Q ss_pred CCeeEeeeeeee-cCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 51 PDKVNVGVGAYR-DDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 51 ~~~i~l~~G~~~-~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
.+.++|+.|..+ |-....++ +.+.+++.+ +.. ....|++..|..+|++++++++ +. + .++.|+||+
T Consensus 32 ~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~-~~~~y~~~~~~~~l~~~la~~~-~~-------~--~v~~t~~gt 99 (467)
T 2oqx_A 32 MNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMR-GDEAYSGSRSYYALAESVKNIF-GY-------Q--YTIPTHQGR 99 (467)
T ss_dssp SCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTS-CCCCSSSCHHHHHHHHHHHHHH-CC-------S--EEEEEC--C
T ss_pred CCceeccCCCeeEecccCCCc-HHHHHHHHHHhcc-CcceeccCchhHHHHHHHHHHh-Cc-------C--cEEEcCCcH
Confidence 456777777432 11112222 556665544 332 2346887778899999999997 32 2 257899999
Q ss_pred hHHHHHHHHHhhhCC-----C----CeEEEcCCCCcchHHHHHhcCceeeEeeec---c-----CCCCCCChHHHHHHHH
Q 047180 129 GACRLFADFQKRFHP-----D----SQIYIPVPTWSNHHNIWRDAHVTQRTFHYY---H-----PGTKGLDFAALMDDIK 191 (337)
Q Consensus 129 ~al~~~~~~l~~~~p-----g----d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~---~-----~~~~~~d~~~l~~~l~ 191 (337)
+|+.+++.++.. + | |+|++..+.|+.|.......|+.++..... + +.++.+|+++|++.++
T Consensus 100 ~A~~~al~~~~~--~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~ 177 (467)
T 2oqx_A 100 GAEQIYIPVLIK--KREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIE 177 (467)
T ss_dssp CSHHHHHHHHHH--HHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHH
T ss_pred HHHHHHHHHHhc--cccccCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHH
Confidence 999999887766 7 8 998888666666777777777776543211 0 1235689999999987
Q ss_pred cC--CCCeEEEEeCCCCCCC-CCCCCHHHHHHHHHHHHhcCceeEEccc
Q 047180 192 NA--PNGSFFLLHACAHNPT-GVDPSEEQWKEISYQIKAKGHFPFFDMA 237 (337)
Q Consensus 192 ~~--~~~~~ili~~~p~NPT-G~~~s~~~~~~l~~~~~~~~~~ii~De~ 237 (337)
.. ++.+++++ ++||||| |.+++.+++++|+++|++||++||+|++
T Consensus 178 ~~~~~~~~~vi~-~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a 225 (467)
T 2oqx_A 178 EVGPNNVPYIVA-TITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSA 225 (467)
T ss_dssp HHCGGGCCCEEE-ESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECT
T ss_pred hcCCCceeEEEE-eccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEch
Confidence 42 12334444 7899998 9999999999999999999999999943
No 173
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.78 E-value=6.6e-19 Score=172.95 Aligned_cols=187 Identities=12% Similarity=0.062 Sum_probs=134.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhC---CC---CeEEEcCCCCcchHH
Q 047180 86 NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFH---PD---SQIYIPVPTWSNHHN 159 (337)
Q Consensus 86 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~---pg---d~Vlv~~P~y~~y~~ 159 (337)
..+|....|..++++.+++++.+..+...++++ +++|+||++++.+++.++.+.. +| |+|+++.|+|+.|..
T Consensus 96 ~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~--~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~~ 173 (497)
T 3mc6_A 96 QLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGC--GTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFDK 173 (497)
T ss_dssp TTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCC--EEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHHH
T ss_pred CCCcccChHHHHHHHHHHHHHHHHhCCCCCCCe--EEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHHH
Confidence 345655667778888888886443322112333 5789999999999987765310 35 899999999999999
Q ss_pred HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC
Q 047180 160 IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ 239 (337)
Q Consensus 160 ~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~ 239 (337)
.++..|++++.+|+. ++++.+|++.+++++.+ ++.+++.++||||||.+.+ +++|+++|+++|+++|+|++|.
T Consensus 174 ~~~~~G~~~~~v~~~-~~~~~~d~~~l~~~i~~---~~~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~livD~a~~ 246 (497)
T 3mc6_A 174 AAYYFGMKLRHVELD-PTTYQVDLGKVKKFINK---NTVLLVGSAPNFPHGIADD---IEGLGKIAQKYKLPLHVDSCLG 246 (497)
T ss_dssp HHHHSCCEEEEECBC-TTTCSBCTTTTGGGCCS---SEEEEEEETTCTTTCCCCS---CTTTTTHHHHTTCCEEEETTTT
T ss_pred HHHHcCCeEEEEecC-cccCcCCHHHHHHHHhh---CCEEEEEECCCCCCCcCCC---HHHHHHHHHHhCCEEEEECcch
Confidence 999999999999984 33578999999988753 3556666899999999977 6688899999999999999998
Q ss_pred CCCCC-----CCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 240 GFASG-----DPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 240 ~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
++... .+. ..++.. +... .-.+++.|++|.++ +|.++|++++
T Consensus 247 ~~~~~f~~~~~~~-~~~~~~-~~~~-g~d~~~~s~~K~l~-~~~~~g~~~~ 293 (497)
T 3mc6_A 247 SFIVSFMEKAGYK-NLPLLD-FRVP-GVTSISCDTHKYGF-APKGSSVIMY 293 (497)
T ss_dssp HHHHGGGTTTTCC-SCCCCS-TTST-TCCEEEEETTTTTC-CCSSCEEEEC
T ss_pred hhhhhhhhhhccc-CCcccc-ccCC-CCcEEEECchhhcC-CCCCceeEEe
Confidence 54210 000 000000 1011 12466778999765 6889999986
No 174
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.78 E-value=8.9e-18 Score=157.96 Aligned_cols=193 Identities=14% Similarity=0.008 Sum_probs=139.2
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH---hhhCCC
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ---KRFHPD 144 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l---~~~~pg 144 (337)
+.+++.+.+++.+..... .|.+..+..++|+++++++ +. + .++.|+||++|+.+++..+ .. ||
T Consensus 9 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~l~~~la~~~-~~-------~--~v~~~~ggt~al~~~~~~~~~~~~--~g 74 (375)
T 2fnu_A 9 PCLDKEDKKAVLEVLNSK--QLTQGKRSLLFEEALCEFL-GV-------K--HALVFNSATSALLTLYRNFSEFSA--DR 74 (375)
T ss_dssp CCCCHHHHHHHHHHHTSS--CCSSSHHHHHHHHHHHHHH-TC-------S--EEEEESCHHHHHHHHHHHSSCCCT--TS
T ss_pred CCCCHHHHHHHHHHHHcC--cccCChHHHHHHHHHHHHh-CC-------C--eEEEeCCHHHHHHHHHHHhcccCC--CC
Confidence 456677888776541211 2445556789999999997 32 1 3578999999999999887 44 89
Q ss_pred CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 047180 145 SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 145 d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~ 224 (337)
|+|++++|+|+.+...++..|++++.+++. + +..+|++.+++.+.+ +..+++.++| ||.+.+ +++|+++
T Consensus 75 d~Vl~~~~~~~~~~~~~~~~g~~~~~~~~~-~-~~~~d~~~l~~~i~~---~~~~v~~~~~---tG~~~~---l~~i~~l 143 (375)
T 2fnu_A 75 NEIITTPISFVATANMLLESGYTPVFAGIK-N-DGNIDELALEKLINE---RTKAIVSVDY---AGKSVE---VESVQKL 143 (375)
T ss_dssp CEEEECSSSCTHHHHHHHHTTCEEEECCBC-T-TSSBCGGGSGGGCCT---TEEEEEEECG---GGCCCC---HHHHHHH
T ss_pred CEEEECCCccHhHHHHHHHCCCEEEEeccC-C-CCCCCHHHHHhhcCc---CceEEEEeCC---cCCccC---HHHHHHH
Confidence 999999999999999999999999999873 3 237899999887752 3344443433 999987 6788899
Q ss_pred HHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccc--ccccccccccceeEeeeCCHHHHHHHHH
Q 047180 225 IKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYA--KNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 225 ~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
|+++|++||+||+|...... .. ..+...+ .+++.||| |.|+. | +|++++. +++++++++..
T Consensus 144 ~~~~~~~li~D~a~~~~~~~---~~----~~~~~~~--~i~~~s~s~~K~~~~-g--~g~~~~~-~~~~~~~~~~~ 206 (375)
T 2fnu_A 144 CKKHSLSFLSDSSHALGSEY---QN----KKVGGFA--LASVFSFHAIKPITT-A--EGGAVVT-NDSELHEKMKL 206 (375)
T ss_dssp HHHHTCEEEEECTTCTTCEE---TT----EETTSSS--SEEEEECCTTSSSCC-S--SCEEEEE-SCHHHHHHHHH
T ss_pred HHHcCCEEEEECccccCCeE---CC----eeccccC--CeEEEeCCCCCCccc-c--CceEEEe-CCHHHHHHHHH
Confidence 99999999999999754321 00 0111111 37788999 99986 7 7888762 45666665543
No 175
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.78 E-value=6e-18 Score=165.69 Aligned_cols=254 Identities=10% Similarity=0.015 Sum_probs=157.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|.....-| ..+|.|.+|+.+ +.. ..+.| ...+..+.+.++++++...... ..++ ++.++||++
T Consensus 54 ~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~l~~-~~~~~-~~~~~~~~~~~la~~l~~~~~~--~~~~--v~~~~sGse 125 (476)
T 3i5t_A 54 RRLIDGPAGMWCAQVG--YGRREIVDAMAHQAMV-LPYAS-PWYMATSPAARLAEKIATLTPG--DLNR--IFFTTGGST 125 (476)
T ss_dssp CEEEETTHHHHTCTTC--BCCHHHHHHHHHHHHH-CCCCC-TTTCBCHHHHHHHHHHHTTSST--TCCE--EEEESSHHH
T ss_pred CEEEECCCchhhccCC--CCCHHHHHHHHHHHHh-ccCcc-cCccCCHHHHHHHHHHHhcCCC--CcCE--EEEeCchHH
Confidence 3468887763321122 135677777654 422 12222 2256678899999998765422 2233 688999999
Q ss_pred HHHHHHHHHhhh------CCCCeEEEcCCCCcchHHHHHhcCcee---------------eEeeeccCCCCCCC------
Q 047180 130 ACRLFADFQKRF------HPDSQIYIPVPTWSNHHNIWRDAHVTQ---------------RTFHYYHPGTKGLD------ 182 (337)
Q Consensus 130 al~~~~~~l~~~------~pgd~Vlv~~P~y~~y~~~~~~~G~~~---------------~~~~~~~~~~~~~d------ 182 (337)
|+..++.++... ..+++|++.+|+|..+.......+... +++|.... .+..|
T Consensus 126 A~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~ 204 (476)
T 3i5t_A 126 AVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRH-AGNRSQEAFLD 204 (476)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGG-CTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccc-cCCCchHHHHH
Confidence 999998877543 246899999999999876655443321 22221000 01222
Q ss_pred --hHHHHHHHHcCC-CCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh
Q 047180 183 --FAALMDDIKNAP-NGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK 258 (337)
Q Consensus 183 --~~~l~~~l~~~~-~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 258 (337)
++.|++.+.+.. .+..++++++++|++|. +++++.+++|.++|+++|+++|+||+|.+|... . ..........
T Consensus 205 ~~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~-G--~~~~~~~~~~ 281 (476)
T 3i5t_A 205 DLVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRC-G--EWFASEKVFG 281 (476)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-S--SSCHHHHTTC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccc-c--CceeeecccC
Confidence 678888776321 23445555667888885 899999999999999999999999999998531 1 1111110111
Q ss_pred cCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHH---Hh-hhcccccCCChhHHHHHHHHhC
Q 047180 259 DGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQL---QQ-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 259 ~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l---~~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
..++++ +|||.++. | +|+|++++ ++++++.+...- .. ....++ +.+.+++.++.++|+
T Consensus 282 v~pdi~---t~sK~l~~-G~~plg~v~~---~~~i~~~~~~~~~~~~~~~~~~t~-~~np~a~aAa~aaL~ 344 (476)
T 3i5t_A 282 VVPDII---TFAKGVTS-GYVPLGGLAI---SEAVLARISGENAKGSWFTNGYTY-SNQPVACAAALANIE 344 (476)
T ss_dssp CCCSEE---EECGGGGT-TSSCCEEEEE---CHHHHHTTSGGGCTTCEECCCCTT-TTCHHHHHHHHHHHH
T ss_pred CCcchh---hhhhhhcC-CCcCeEEEEE---CHHHHHHHhcCCcccccccccCCC-CcCHHHHHHHHHHHH
Confidence 123433 68999994 9 99999886 455444332100 00 112334 457788888888886
No 176
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.78 E-value=4e-18 Score=160.89 Aligned_cols=194 Identities=14% Similarity=0.014 Sum_probs=138.8
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH-hhhCCCCe
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ-KRFHPDSQ 146 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l-~~~~pgd~ 146 (337)
+...+.+.+++.+.... ..|.+..+..+||+++++++ +. + .++.|.||++|+.+++..+ .. +||+
T Consensus 13 ~~~~~~~~~a~~~~~~~--~~~~~~~~~~~l~~~la~~~-~~-------~--~~i~~~sgt~al~~~l~~l~~~--~gd~ 78 (373)
T 3frk_A 13 DEIEYEIKFKFEEIYKR--NWFILGDEDKKFEQEFADYC-NV-------N--YCIGCGNGLDALHLILKGYDIG--FGDE 78 (373)
T ss_dssp HHHHHHHHHHHHHHHHH--TCCSSSHHHHHHHHHHHHHH-TS-------S--EEEEESCHHHHHHHHHHHTTCC--TTCE
T ss_pred CCCCHHHHHHHHHHHHC--CCccCCchHHHHHHHHHHHh-CC-------C--eEEEeCCHHHHHHHHHHHcCCC--CcCE
Confidence 33456666666553111 13666678899999999997 22 1 2578899999999998877 44 8999
Q ss_pred EEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHH
Q 047180 147 IYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIK 226 (337)
Q Consensus 147 Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~ 226 (337)
|+++.|+|+.+...++..|++++.++.. ++++.+|++++++.+.+ +..+++ |+||||.+.+ +++|.++|+
T Consensus 79 Vi~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~l~~---~~~~v~---~~n~~G~~~~---l~~i~~l~~ 148 (373)
T 3frk_A 79 VIVPSNTFIATALAVSYTGAKPIFVEPD-IRTYNIDPSLIESAITE---KTKAII---AVHLYGQPAD---MDEIKRIAK 148 (373)
T ss_dssp EEEETTSCTHHHHHHHHHSCEEEEECEE-TTTTEECGGGTGGGCCT---TEEEEE---EECCTTCCCC---HHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEecc-ccccCcCHHHHHHhcCC---CCeEEE---EECCCcCccc---HHHHHHHHH
Confidence 9999999999999999999999999984 34688999999887752 344444 6899999866 667888999
Q ss_pred hcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccc--ccccccccccceeEeeeCCHHHHHHHH
Q 047180 227 AKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYA--KNMGLYGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 227 ~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S--K~~~~~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
++|+++|+|++|..... ++. ....... -+++.||| |.++.+| +.|+++. +++++.+++.
T Consensus 149 ~~~~~li~D~a~~~g~~--~~~-----~~~~~~~--d~~~~S~~~~K~l~~~g-~gg~~~~--~~~~~~~~~~ 209 (373)
T 3frk_A 149 KYNLKLIEDAAQAHGSL--YKG-----MKVGSLG--DAAGFSFYPAKNLGSLG-DGGAVVT--NDKDLAEKIK 209 (373)
T ss_dssp HHTCEEEEECTTCTTCE--ETT-----EETTSSS--SEEEEECCTTSSSCCSS-SCEEEEE--SCHHHHHHHH
T ss_pred HcCCEEEEECCcccCCE--ECC-----Eeccccc--cEEEEeCcCCCccCccc-eeEEEEe--CCHHHHHHHH
Confidence 99999999999975331 110 0011111 26678887 8776435 4777765 5666655544
No 177
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.78 E-value=2.6e-17 Score=158.86 Aligned_cols=175 Identities=15% Similarity=0.097 Sum_probs=129.9
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEe---eccchhHHHHHHHHHhhhCCCCeEEEcC-CCCcchHHH--------
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ---SLSGTGACRLFADFQKRFHPDSQIYIPV-PTWSNHHNI-------- 160 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~---t~g~~~al~~~~~~l~~~~pgd~Vlv~~-P~y~~y~~~-------- 160 (337)
.|..+|++.+|+++ +.. . .++ +.+|++|+.+++..+.+ |||+|++++ |.|+.+...
T Consensus 73 ~~~~~Le~~lA~l~-g~e-------~--alv~p~~~sGt~Ai~~al~all~--pGD~Vl~~~~~~y~~~~~~~g~~~~~~ 140 (427)
T 3i16_A 73 IGRDSLDAVYARVF-NTE-------S--ALVRPHFVNGTHALGAALFGNLR--PGNTMLSVCGEPYDTLHDVIGITENSN 140 (427)
T ss_dssp HHHHHHHHHHHHHH-TCS-------E--EEEETTCCSHHHHHHHHHHHHCC--TTCEEEESSSSCCGGGHHHHTCSCCCS
T ss_pred HHHHHHHHHHHHHh-CCc-------c--eEEeCCCccHHHHHHHHHHHHhC--CCCEEEEeCCCccHHHHHHHhccccch
Confidence 35677889999876 321 1 134 78889999888877666 999999999 999998744
Q ss_pred ---HHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCC----CCCCCCCCCCHHHHHHHHHHHHh--cCce
Q 047180 161 ---WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHAC----AHNPTGVDPSEEQWKEISYQIKA--KGHF 231 (337)
Q Consensus 161 ---~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~----p~NPTG~~~s~~~~~~l~~~~~~--~~~~ 231 (337)
++..|.+++.+++. + ++.+|++.+++++.+.++.+++++ ++ |+||||.+ .++++|+++|++ ++++
T Consensus 141 ~~~l~~~G~~~~~v~~~-~-~g~~D~e~l~~~l~~~~~tklV~i-~~s~~~p~nptg~i---~dl~~i~~la~~~~~g~~ 214 (427)
T 3i16_A 141 MGSLKEFGINYKQVDLK-E-DGKPNLEEIEKVLKEDESITLVHI-QRSTGYGWRRALLI---EDIKSIVDCVKNIRKDII 214 (427)
T ss_dssp SCCTGGGTCEEEECCCC-T-TSSCCHHHHHHHHHTCTTEEEEEE-ECSCCSSSSCCCCH---HHHHHHHHHHHHHCTTSE
T ss_pred HHHHHHcCCEEEEecCc-c-CCCcCHHHHHHHhhCCCCCEEEEE-EcCCCCCCCCcccH---HHHHHHHHHHHHhCCCCE
Confidence 45679999998873 2 467899999999873223345555 56 88888765 789999999999 9999
Q ss_pred eEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHH
Q 047180 232 PFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 232 ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+++|++|..+... . . +. ..+ ..++++|+||++|.+| .+.||+++ ++++++++..
T Consensus 215 livD~a~~~~~~~-~-~---p~----~~g-aDiv~~S~sK~lgg~g~~~gG~i~~---~~~li~~l~~ 269 (427)
T 3i16_A 215 CFVDNCYGEFMDT-K-E---PT----DVG-ADLIAGSLIKNIGGGIAPTGGYLAG---TKDCIEKTSY 269 (427)
T ss_dssp EEEECTTTTTSSS-S-C---GG----GGT-CSEEEEETTSGGGTTTCCSCEEEEE---CHHHHHHHHH
T ss_pred EEEECCCcccccc-C-C---cc----ccC-CeEEEecCcccCCCCCCceEEEEEE---CHHHHHHHHH
Confidence 9999999887632 1 1 11 111 3478899999999766 67788875 5777776655
No 178
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.78 E-value=1.4e-18 Score=167.29 Aligned_cols=248 Identities=14% Similarity=-0.002 Sum_probs=141.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|...+.-| ..+|.+.+|+.+ +......+| +.....+|.+.+++++. . .++ ++.|+||++
T Consensus 53 ~~ylD~~~~~~~~~lG--~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~~--~-----~~~--v~~~~sGse 120 (429)
T 4e77_A 53 KAYIDYVGSWGPMILG--HNHPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLVP--T-----MDM--VRMVNSGTE 120 (429)
T ss_dssp CEEEESSGGGTTCTTC--BTCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHST--T-----CSE--EEEESSHHH
T ss_pred CEEEECCCchhccccC--CCCHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhCC--C-----CCE--EEEeCcHHH
Confidence 3568887775322122 246778777655 433222334 33334556666666542 1 233 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hcCce--eeEeeeccC-------C--C-CCCChHHHHHHHHcCCCC
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DAHVT--QRTFHYYHP-------G--T-KGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~G~~--~~~~~~~~~-------~--~-~~~d~~~l~~~l~~~~~~ 196 (337)
++.+++.+.....+++.|++.+|+|..+...+. ..|.. ....|.... . . ..-|++.+++.+++.+.+
T Consensus 121 a~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 200 (429)
T 4e77_A 121 ATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQE 200 (429)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTT
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCC
Confidence 999988754432257899999999998764221 11111 111111000 0 0 012789999988754334
Q ss_pred eEEEEeCCCCCCCCCCCC--HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 197 SFFLLHACAHNPTGVDPS--EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s--~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
..+++ ++|+||+|-++. ++.+++|.++|++||+++|+||+|.+|..+. ......+ ....++ .||||.|+
T Consensus 201 ~~~vi-~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~----~~~~~~~-~~~pdi---~t~sK~~~ 271 (429)
T 4e77_A 201 VACII-VEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVAL----AGAQDYY-HVIPDL---TCLGKIIG 271 (429)
T ss_dssp EEEEE-ECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBT----TCHHHHT-TCCCSE---EEEEGGGG
T ss_pred EEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCc----chHHHhc-CCCCCe---eeeccccc
Confidence 45454 578888775544 5559999999999999999999999883221 1111111 112233 48999999
Q ss_pred ccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
+|+|+||+++ ++++++.+...-......+| +.+.+++.++..+|+
T Consensus 272 -~G~~~G~~~~---~~~~~~~l~~~~~~~~~~t~-~~~~~~~aaa~aal~ 316 (429)
T 4e77_A 272 -GGMPVGAFGG---RREVMNALAPTGPVYQAGTL-SGNPIAMAAGFACLT 316 (429)
T ss_dssp -TTSCCEEEEE---CHHHHTTBTTTSSBCC--CC-CCCHHHHHHHHHHHH
T ss_pred -CCCCeEEEEE---CHHHHHHhccCCCccccCCC-CCCHHHHHHHHHHHH
Confidence 7999999875 45544333210000112233 467788888877775
No 179
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.78 E-value=1.3e-18 Score=167.33 Aligned_cols=240 Identities=14% Similarity=-0.000 Sum_probs=141.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|...+.-| + .+|.+.+|+.+ +......+| ..++++.+++++..... ..++ ++.|+||++
T Consensus 52 ~~~iD~~~~~~~~~lG-~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~---~~~~--v~~~~~g~e 119 (424)
T 2e7u_A 52 NRYLDYVMSWGPLILG-H-AHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP---FVDL--VRFVNSGTE 119 (424)
T ss_dssp CEEEESSGGGTTCTTC-B-TCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT---TCCE--EEEESSHHH
T ss_pred CEEEEccccccccccC-C-CCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC---CCCE--EEEeCCHHH
Confidence 3468888774321112 2 56778777655 433212233 23344444444422211 1233 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-hc-------------Cc------eeeEeeeccCCCCCCChHHHHHH
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-DA-------------HV------TQRTFHYYHPGTKGLDFAALMDD 189 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~~-------------G~------~~~~~~~~~~~~~~~d~~~l~~~ 189 (337)
|+.+++.+...+.+++.|++.+|+|+.+...+. .. |. +++.+|+ .|++.+++.
T Consensus 120 a~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 192 (424)
T 2e7u_A 120 ATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV 192 (424)
T ss_dssp HHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence 999888752111156899999999998754322 12 21 2233321 378999988
Q ss_pred HHcCCCCeEEEEeCCCCCC-CCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEe
Q 047180 190 IKNAPNGSFFLLHACAHNP-TGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQ 267 (337)
Q Consensus 190 l~~~~~~~~ili~~~p~NP-TG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 267 (337)
+++.+.+.++++ ++|+|| ||.+ .+++++++|.++ ++||++||+||+|.+|..+ .......+ ....++ .
T Consensus 193 l~~~~~~~~~vi-~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g----~~~~~~~~-~~~~di---~ 262 (424)
T 2e7u_A 193 LKRRGEEIAAII-FEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLA----FGGATELL-GLKPDL---V 262 (424)
T ss_dssp HHHHGGGEEEEE-ECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSS----TTHHHHHH-TCCCSE---E
T ss_pred HHhCCCCEEEEE-EeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccc----hhHHHHHh-CCCcch---h
Confidence 863212334444 567776 8975 489999999999 9999999999999988432 11111111 222343 3
Q ss_pred cccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhC
Q 047180 268 SYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 268 S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
||||.|| +|+|+||+++ ++++++.+..........++ +.+.++|.++..+|+
T Consensus 263 s~sK~l~-~G~~~G~~~~---~~~~~~~~~~~~~~~~~~t~-~~~~~~~aaa~aal~ 314 (424)
T 2e7u_A 263 TLGKILG-GGLPAAAYAG---RREIMEKVAPLGPVYQAGTL-SGNPLAMAAGLATLE 314 (424)
T ss_dssp EECGGGG-TTSSCEEEEE---CHHHHTTBTTTSSBCCCCTT-CSCHHHHHHHHHHHH
T ss_pred hhhhhhh-CCcceEEEEE---cHHHHhhhcccCCcccCCCC-CCCHHHHHHHHHHHH
Confidence 9999999 5999999986 34443332210000111233 456778888877775
No 180
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.77 E-value=1.6e-17 Score=159.52 Aligned_cols=179 Identities=18% Similarity=0.140 Sum_probs=131.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEe---eccchhHHHHHHHHHhhhCCCCeEEEcC-CCCcchHHH--
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ---SLSGTGACRLFADFQKRFHPDSQIYIPV-PTWSNHHNI-- 160 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~---t~g~~~al~~~~~~l~~~~pgd~Vlv~~-P~y~~y~~~-- 160 (337)
+.|+. .|..+|++.+|+++ +.. . .++ +.+|++|+.+++..+.+ |||+|++++ |.|+.+...
T Consensus 54 ~~y~~-~~~~~Le~~lA~l~-g~e-------~--alv~p~~~sGt~Ai~~al~all~--~GD~Vl~~~~~~y~~~~~~~~ 120 (409)
T 3jzl_A 54 YGYDD-EGRDTLERVYATVF-KTE-------A--ALVRPQIISGTHAISTVLFGILR--PDDELLYITGQPYDTLEEIVG 120 (409)
T ss_dssp TCTTC-HHHHHHHHHHHHHH-TCS-------E--EEEETTSCSHHHHHHHHHHHHCC--TTCEEEECSSSCCTTHHHHHT
T ss_pred CCCCh-hHHHHHHHHHHHHh-CCC-------c--EEEECCCccHHHHHHHHHHHhcC--CCCEEEEeCCCCcHhHHHHHh
Confidence 34543 35678999999876 321 1 233 78889999988877665 999999998 999998854
Q ss_pred --------HHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCC----CCCCCCCCCCHHHHHHHHHHHHh-
Q 047180 161 --------WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHAC----AHNPTGVDPSEEQWKEISYQIKA- 227 (337)
Q Consensus 161 --------~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~----p~NPTG~~~s~~~~~~l~~~~~~- 227 (337)
++..|.+++.+++. + ++.+|+++++++++. +.++++ +++ |+||||.+ .++++|+++|++
T Consensus 121 ~~g~~~~~l~~~G~~~~~v~~~-~-~g~~d~e~l~~ai~~--~tklV~-i~~s~g~p~nptg~v---~~l~~I~~la~~~ 192 (409)
T 3jzl_A 121 IRKQGQGSLKDFHIGYSSVPLL-E-NGDVDFPRIAKKMTP--KTKMIG-IQRSRGYADRPSFTI---EKIKEMIVFVKNI 192 (409)
T ss_dssp SSSSSSSCTGGGTCEEEECCCC-T-TSCCCHHHHHHHCCT--TEEEEE-EECSCTTSSSCCCCH---HHHHHHHHHHHHH
T ss_pred cccchhhHHHHcCCEEEEeCCC-C-CCCcCHHHHHHhccC--CCeEEE-EECCCCCCCCCcCcc---ccHHHHHHHHHhh
Confidence 46679999998873 3 577999999998852 334444 466 99999876 678999999999
Q ss_pred -cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccc-ccceeEeeeCCHHHHHHHHHH
Q 047180 228 -KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ-RVGCLSVLCEDEKQAVAVKSQ 299 (337)
Q Consensus 228 -~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~-RvG~~~~~~~~~~~~~~~~~~ 299 (337)
+++++++|++|..+.+. . .. . ..+ ..++++|+||++|.+|. +.||+++ ++++++++...
T Consensus 193 ~~~~~livD~a~~~~~~~-~-~p---~----~~g-~Div~~S~sK~lgg~~~~~GG~v~~---~~~li~~l~~~ 253 (409)
T 3jzl_A 193 NPEVIVFVDNCYGEFVEY-Q-EP---P----EVG-ADIIAGSLIKNPGGGLAKTGGYIAG---KEALVDLCGYR 253 (409)
T ss_dssp CTTCEEEEECTTCTTTSS-C-CS---G----GGT-CSEEEEETTSGGGTTTCSSCEEEEE---CHHHHHHHHHH
T ss_pred CCCCEEEEeCCccccccc-C-Cc---c----ccC-CeEEEECccccCCccCCceEEEEEe---CHHHHHHHHHH
Confidence 99999999999887632 1 11 1 111 34888999999997663 4588764 57777776653
No 181
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.77 E-value=6.4e-18 Score=163.39 Aligned_cols=235 Identities=11% Similarity=0.057 Sum_probs=137.1
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCC--CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccch
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTAN--MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGT 128 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~ 128 (337)
..+|+..|.... .-...+|.+.+|+.+ +..... ..| +.....+|++.+++++ + .++ ++.|+||+
T Consensus 66 ~ylD~~~g~~~~--~lgh~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~--v~~~~sGs 132 (433)
T 1z7d_A 66 RYYDFLSAYSSV--NQGHCHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL-G-------YDK--VLMMNTGA 132 (433)
T ss_dssp EEEESSHHHHTT--TTCBTCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH-T-------CSE--EEEESSHH
T ss_pred EEEEcccchhhc--ccCCCCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc-C-------CCe--EEEeCCHH
Confidence 456776664221 111156777777655 332111 123 2223356777777765 2 133 57899999
Q ss_pred hHHHHHHHHHhhh-------CCC-CeEEEcCCCCcchHH-HHHhcC------------ceeeEeeeccCCCCCCChHHHH
Q 047180 129 GACRLFADFQKRF-------HPD-SQIYIPVPTWSNHHN-IWRDAH------------VTQRTFHYYHPGTKGLDFAALM 187 (337)
Q Consensus 129 ~al~~~~~~l~~~-------~pg-d~Vlv~~P~y~~y~~-~~~~~G------------~~~~~~~~~~~~~~~~d~~~l~ 187 (337)
+|+.+++.++..+ .+| |+|++++|+|+.+.. .+...| ..++.+|+ .|++.++
T Consensus 133 eA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le 205 (433)
T 1z7d_A 133 EANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEALE 205 (433)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHHH
Confidence 9999988765421 267 999999999998754 344444 23333332 2789999
Q ss_pred HHHHcCCCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEE
Q 047180 188 DDIKNAPNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLA 266 (337)
Q Consensus 188 ~~l~~~~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 266 (337)
+.++. + +..+++.+..+|+||. +++++.+++|.++|+++|+++|+||+|.+|.... .......+ ....+++
T Consensus 206 ~~l~~-~-~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g---~~~~~~~~-~~~~di~-- 277 (433)
T 1z7d_A 206 EELKD-P-NVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTG---KLLCVHHY-NVKPDVI-- 277 (433)
T ss_dssp HHHTS-T-TEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGGG-TCCCSEE--
T ss_pred HHhCC-C-CEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCC---cchhhHhc-CCCCCEE--
Confidence 98852 2 3344443334677897 4799999999999999999999999998874310 00111111 1123333
Q ss_pred ecccccccccc-cccceeEeeeCCHHHHHHHHHHHHhhh-cccccCCChhHHHHHHHHhC
Q 047180 267 QSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQLA-RPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 267 ~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~~~~~~l~ 324 (337)
||||.+| +| +|+||+++ ++++++. +.... ..++ +.+.+++.++..+|+
T Consensus 278 -t~sK~l~-~G~~~~G~v~~---~~~~~~~----l~~~~~~~t~-~~~~~~~aaa~aal~ 327 (433)
T 1z7d_A 278 -LLGKALS-GGHYPISAVLA---NDDIMLV----IKPGEHGSTY-GGNPLAASICVEALN 327 (433)
T ss_dssp -EECGGGG-TTSSCCEEEEE---CHHHHTT----CCTTCCCCTT-TTCHHHHHHHHHHHH
T ss_pred -EECcccc-CCCCCeEEEEE---CHHHHhh----hccccccccC-CCCHHHHHHHHHHHH
Confidence 8999999 79 99999986 3444333 22211 2233 456777877777765
No 182
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.77 E-value=1.8e-18 Score=166.83 Aligned_cols=238 Identities=17% Similarity=0.046 Sum_probs=143.9
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|++.|...+.-| ..+|.+.+|+.+ +......+|. ..-..++++.+++++ + + .++ ++.|+||++
T Consensus 56 ~~~lD~~~~~~~~~lG--~~~~~v~~a~~~~~~~~~~~~~~-~~~~~~l~~~la~~~-~-~-----~~~--v~~~~sgse 123 (434)
T 2epj_A 56 ARIVDLVLAYGPLILG--HKHPRVLEAVEEALARGWLYGAP-GEAEVLLAEKILGYV-K-R-----GGM--IRFVNSGTE 123 (434)
T ss_dssp CEEEESSGGGTTCTTC--BTCHHHHHHHHHHHHTCSCCSSC-CHHHHHHHHHHHHHH-C-T-----TCE--EEEESSHHH
T ss_pred CEEEEcccchhcccCC--CCCHHHHHHHHHHHHhCCCCCCC-CHHHHHHHHHHHHhC-C-C-----CCE--EEEeCCHHH
Confidence 3468888775321112 246777777655 3332222332 222345566666654 1 1 233 578999999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH-h-------------cCc------eeeEeeeccCCCCCCChHHHHHH
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR-D-------------AHV------TQRTFHYYHPGTKGLDFAALMDD 189 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~-~-------------~G~------~~~~~~~~~~~~~~~d~~~l~~~ 189 (337)
|+.+++.+...+.+++.|++.+|+|+.+...+. . .|. +++.+|+ .|++.+++.
T Consensus 124 A~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 196 (434)
T 2epj_A 124 ATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence 999988762111257899999999998654221 1 132 2333332 378999988
Q ss_pred HHcCCCCeEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEec
Q 047180 190 IKNAPNGSFFLLHACAHNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 190 l~~~~~~~~ili~~~p~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
+++.+.+.++++.+..+||||.++ +++.+++|.++|++||+++|+||+|.+|..+ . ......+ ....++ .|
T Consensus 197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g---~-~~~~~~~-~~~~di---~s 268 (434)
T 2epj_A 197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLG---L-EGAQGYF-NIEGDI---IV 268 (434)
T ss_dssp HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSS---T-THHHHHH-TCCCSE---EE
T ss_pred HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCC---c-chhhHHh-CCCCCe---ee
Confidence 864222344444333456799866 7999999999999999999999999988422 1 1111111 112333 48
Q ss_pred ccccccccccccceeEeeeCCHHHHHHHHHHHHhh----hcccccCCChhHHHHHHHHhC
Q 047180 269 YAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQL----ARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~~~~~~l~ 324 (337)
|||.++. |+|+||+++ ++++++. +... ...++ +.+.+++.++..+|+
T Consensus 269 ~sK~l~~-G~~~G~v~~---~~~~~~~----l~~~~~~~~~~t~-~~~~~~~aa~~a~l~ 319 (434)
T 2epj_A 269 LGKIIGG-GFPVGAVAG---SREVMSL----LTPQGKVFNAGTF-NAHPITMAAGLATLK 319 (434)
T ss_dssp EEGGGGT-TSSCEEEEE---CHHHHTT----BTTTSSBCCCCTT-TTCHHHHHHHHHHHH
T ss_pred ecchhcC-Ccceeeeee---cHHHHHh----hccCCCcccCCCC-CcCHHHHHHHHHHHH
Confidence 9999996 999999986 3444333 3221 11223 456777877777665
No 183
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.77 E-value=1.6e-17 Score=160.97 Aligned_cols=219 Identities=11% Similarity=0.065 Sum_probs=140.6
Q ss_pred cchHHHHHHHH-hcCcCC--CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-----
Q 047180 70 VLECVREAERR-IAGTAN--MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF----- 141 (337)
Q Consensus 70 ~~~~v~~a~~~-~~~~~~--~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~----- 141 (337)
.+|.+.+|+.+ +..... ..| +.....++++.+++++ + .++ ++.|+||++|+.+++.++..+
T Consensus 93 ~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~-g-------~~~--v~~~~sGseA~~~al~~~~~~~~~~~ 161 (439)
T 2oat_A 93 CHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLF-N-------YHK--VLPMNTGVEAGETACKLARKWGYTVK 161 (439)
T ss_dssp TCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHH-T-------CSE--EEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhc-C-------CCE--EEEeCCHHHHHHHHHHHHHHHhhhcc
Confidence 56778777655 332111 123 2234567888888876 3 123 578999999999998765421
Q ss_pred --CCC-CeEEEcCCCCcchH-HHHHhcC------------ceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCC
Q 047180 142 --HPD-SQIYIPVPTWSNHH-NIWRDAH------------VTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACA 205 (337)
Q Consensus 142 --~pg-d~Vlv~~P~y~~y~-~~~~~~G------------~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p 205 (337)
.+| |+|++++|+|+.+. ..+...| .+++.+|+ .|++.+++.++. .+..+++....
T Consensus 162 g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le~~l~~--~~~~~vi~ep~ 232 (439)
T 2oat_A 162 GIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALERALQD--PNVAAFMVEPI 232 (439)
T ss_dssp CCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHHHHTTS--TTEEEEEECSS
T ss_pred CCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHHHHhCC--CCEEEEEEECC
Confidence 257 89999999998864 4555555 34444443 278999998852 23344443334
Q ss_pred CCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc-ccccee
Q 047180 206 HNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCL 283 (337)
Q Consensus 206 ~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~ 283 (337)
+||||. +++++.+++|.++|++||+++|+||+|.+|.... .......+ ....+++ ||||.++ +| +|+||+
T Consensus 233 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g---~~~~~~~~-~~~~Di~---t~sK~l~-~G~~~~G~v 304 (439)
T 2oat_A 233 QGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTG---RWLAVDYE-NVRPDIV---LLGKALS-GGLYPVSAV 304 (439)
T ss_dssp BTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTS---SSSGGGGG-TCCCSEE---EECGGGG-TTSSCCEEE
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCC---cchhHHHh-CCCCcEE---Eeccccc-CCCCCeEEE
Confidence 567896 6799999999999999999999999998874311 00111111 1123433 8999999 59 999999
Q ss_pred EeeeCCHHHHHHHHHHHHhhh-cccccCCChhHHHHHHHHhC
Q 047180 284 SVLCEDEKQAVAVKSQLQQLA-RPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~q~~~~~~l~ 324 (337)
++ ++++++. +.... ..++ +.+.+++.++..+|+
T Consensus 305 ~~---~~~~~~~----l~~~~~~~t~-~~~~~~~aaa~aal~ 338 (439)
T 2oat_A 305 LC---DDDIMLT----IKPGEHGSTY-GGNPLGCRVAIAALE 338 (439)
T ss_dssp EE---CHHHHTT----SCTTSSCCSS-TTCHHHHHHHHHHHH
T ss_pred EE---CHHHHhc----cCCCCcccCC-CcCHHHHHHHHHHHH
Confidence 86 3444333 22211 2234 456778877777765
No 184
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.76 E-value=3.6e-18 Score=159.53 Aligned_cols=148 Identities=13% Similarity=0.050 Sum_probs=108.3
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc-hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSN-HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~-y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
+++|+|+++++.+++..+.. | +.+++..|.|.. +...++..|++++.++. +. ++.+|+++++ +. ++.+++
T Consensus 64 v~~~~g~t~al~~~~~~l~~--~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~-~~-~~~~d~~~l~--~~--~~~~~v 134 (362)
T 3ffr_A 64 VLFLASATEIWERIIQNCVE--K-KSFHCVNGSFSKRFYEFAGELGREAYKEEA-AF-GKGFYPADIT--VP--ADAEII 134 (362)
T ss_dssp EEEESCHHHHHHHHHHHHCS--S-EEEEEECSHHHHHHHHHHHHTTCEEEEEEC-CT-TCCCCGGGCC--CC--TTCCEE
T ss_pred EEEeCCchHHHHHHHHhccC--C-cEEEEcCcHHHHHHHHHHHHhCCCeEEEec-CC-CCCCCHHHHh--cc--CCccEE
Confidence 57899999999999988765 6 667777777773 34567788999999987 32 5789999987 32 333455
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhc-CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc-ccc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAK-GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG-LYG 277 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~-~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G 277 (337)
++ ++||||||.+++ +++|+++|+++ |+++|+|++|...... . + + ....+++.|+||.|+ ++|
T Consensus 135 ~~-~~~~nptG~~~~---l~~i~~la~~~p~~~li~D~a~~~~~~~-~--~------~---~~~d~~~~s~~K~~~~~~G 198 (362)
T 3ffr_A 135 CL-THNETSSGVSMP---VEDINTFRDKNKDALIFVDAVSSLPYPK-F--D------W---TKIDSVFFSVQKCFGLPAG 198 (362)
T ss_dssp EE-ESEETTTTEECC---HHHHTTSGGGSTTSEEEEECTTTTTSSC-C--C------T---TSCSEEEEETTSTTCCCSC
T ss_pred EE-EcCCCCcceeCC---HHHHHHHHHhCCCCEEEEecccccCCcc-c--C------h---hHCcEEEEecccccCCCCc
Confidence 54 789999999999 66788899999 9999999998754321 1 0 1 013477899999999 888
Q ss_pred cccceeEeeeCCHHHHHHHHH
Q 047180 278 QRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 278 ~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+ |++++ +++.++++..
T Consensus 199 ~--g~~~~---~~~~~~~~~~ 214 (362)
T 3ffr_A 199 L--GVWIL---NDRVIEKSKA 214 (362)
T ss_dssp C--EEEEE---EHHHHHHHHH
T ss_pred e--EEEEE---CHHHHHHhhh
Confidence 5 66654 4555555543
No 185
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.76 E-value=4.2e-17 Score=158.29 Aligned_cols=166 Identities=16% Similarity=0.131 Sum_probs=122.0
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH----HHhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI----WRDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~----~~~~G~~~~~ 170 (337)
..++++.+++++ +. ++ .+++.+|++++.+++..+.+ +||+|++++|.|+.+... ++..|.+++.
T Consensus 116 ~~~l~~~lA~l~-g~------~~---~v~~~sG~~Ai~~al~~l~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~ 183 (445)
T 1qgn_A 116 TVVLEEKISALE-GA------ES---TLLMASGMCASTVMLLALVP--AGGHIVTTTDCYRKTRIFIETILPKMGITATV 183 (445)
T ss_dssp HHHHHHHHHHHH-TC------SE---EEEESCHHHHHHHHHHHHSC--SSCEEEEETTSCHHHHHHHHHTGGGGTCEEEE
T ss_pred HHHHHHHHHHHh-CC------Cc---EEEeCCHHHHHHHHHHHHhC--CCCEEEEcCCCchhHHHHHHHHHHHcCCEEEE
Confidence 348999999986 32 11 24455556999998876655 899999999999987764 4568999888
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
++.. |++.+++.++. +...++++++||||||.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 184 v~~~-------d~~~l~~ai~~--~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~---~-- 246 (445)
T 1qgn_A 184 IDPA-------DVGALELALNQ--KKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ---K-- 246 (445)
T ss_dssp ECSS-------CHHHHHHHHHH--SCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC---C--
T ss_pred eCCC-------CHHHHHHHhcc--CCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC---C--
Confidence 8651 78999998874 33144445899999999987 678899999999999999999755321 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+ + ..+ .-+++.|+||.||..| .|+||+++ ++++++++..
T Consensus 247 -~---~-~~g-~Div~~S~sK~~gg~gd~~~G~l~~---~~~l~~~l~~ 286 (445)
T 1qgn_A 247 -A---L-ALG-ADLVLHSATKFLGGHNDVLAGCISG---PLKLVSEIRN 286 (445)
T ss_dssp -T---T-TTT-CSEEEECTTTTTTCSSSCCCEEEEE---CHHHHHHHHH
T ss_pred -c---c-ccC-CEEEEECCcccccccccceEEEEEE---CHHHHHHHHH
Confidence 0 1 112 3478899999999666 47999885 5666665543
No 186
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.76 E-value=4.7e-17 Score=157.03 Aligned_cols=179 Identities=16% Similarity=0.124 Sum_probs=131.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEe---eccchhHHHHHHHHHhhhCCCCeEEEcC-CCCcchHH---
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQ---SLSGTGACRLFADFQKRFHPDSQIYIPV-PTWSNHHN--- 159 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~---t~g~~~al~~~~~~l~~~~pgd~Vlv~~-P~y~~y~~--- 159 (337)
+.|+. .|..+|++.+|+++ +.. . .++ +.+|++|+.+++..+.+ |||+|++++ |.|+.+..
T Consensus 69 y~Y~~-~g~~~Le~~lA~l~-g~e-------~--alv~p~~~sGt~A~~~al~all~--pGD~Vl~~~~~~y~~~~~~~g 135 (427)
T 3hvy_A 69 YGYND-IGRDSLDRVYANIF-NTE-------S--AFVRPHFVNGTHAIGAALFGNLR--PNDTMMSICGMPYDTLHDIIG 135 (427)
T ss_dssp TCTTC-HHHHHHHHHHHHHH-TCS-------E--EEEETTCCSHHHHHHHHHHHTCC--TTCEEEECSSSCCGGGHHHHT
T ss_pred CCCCc-hhHHHHHHHHHHHh-CCC-------c--eEEeCCCCcHHHHHHHHHHHhcC--CCCEEEEeCCCCchhHHHHhc
Confidence 34543 36678899999876 321 1 234 78889999888877765 999999999 99998874
Q ss_pred --------HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCC----CCCCCCCCCCHHHHHHHHHHHHh
Q 047180 160 --------IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHAC----AHNPTGVDPSEEQWKEISYQIKA 227 (337)
Q Consensus 160 --------~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~----p~NPTG~~~s~~~~~~l~~~~~~ 227 (337)
.++..|.+++.++. + ++.+|++++++++.+.++.+++++ ++ |+||||.+ .++++|+++|++
T Consensus 136 ~~~~~~~~~l~~~G~~~~~v~~-~--~~~~d~e~l~~~i~~~~~tklV~i-~~s~gyp~nptg~v---~dl~~i~~ia~~ 208 (427)
T 3hvy_A 136 MDDSKKVGSLREYGVKYKMVDL-K--DGKVDINTVKEELKKDDSIKLIHI-QRSTGYGWRKSLRI---AEIAEIIKSIRE 208 (427)
T ss_dssp CCTTCCSCCTGGGTCEEEECCC-B--TTBCCHHHHHHHHHHCTTEEEEEE-ESSCCSSSSCCCCH---HHHHHHHHHHHH
T ss_pred cccchhhhHHHHcCCEEEEecC-C--CCCcCHHHHHHHhhCCCCCEEEEE-ECCCCCCCCccccH---HHHHHHHHHHHH
Confidence 34567999999887 3 578999999999873223445555 55 88888765 789999999999
Q ss_pred --cCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHH
Q 047180 228 --KGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 228 --~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+|+++++|++|..+.+. . . +. ..+ ..++++|+||++|.+| .+.||+++ +++++++++.
T Consensus 209 ~~~g~~livD~a~~~~~~~-~-~---p~----~~g-aDiv~~S~sK~lgg~g~~~GG~i~~---~~~li~~l~~ 269 (427)
T 3hvy_A 209 VNENVIVFVDNCYGEFVEE-K-E---PT----DVG-ADIIAGSLIKNIGGGIATTGGYIAG---KEEYVTQATF 269 (427)
T ss_dssp HCSSSEEEEECTTCTTTSS-S-C---GG----GGT-CSEEEEETTSGGGTTTCCSCEEEEE---CHHHHHHHHH
T ss_pred hCCCCEEEEECCccccccC-C-C---Cc----ccC-CeEEEECCcccccccccceEEEEEE---CHHHHHHHHH
Confidence 89999999999877532 1 1 11 111 3478899999999665 45677764 6777777655
No 187
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.76 E-value=6.6e-18 Score=161.26 Aligned_cols=154 Identities=13% Similarity=0.105 Sum_probs=98.5
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH---HHHhcCce--eeEeeeccCCCCCCChHHHHHHHHcCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN---IWRDAHVT--QRTFHYYHPGTKGLDFAALMDDIKNAPN 195 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~---~~~~~G~~--~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 195 (337)
++++.| ++++.+++..+.. |||+|++++|+|+.+.. .+...|.. +++++. + +++.+|++.+++.+.+. +
T Consensus 91 i~~~sG-t~a~~~~~~~~~~--~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~-~~~~~d~~~l~~~i~~~-~ 164 (417)
T 3n0l_A 91 VQPNSG-SQANQGVYAALIN--PGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGV-E-LDGRIDYEKVREIAKKE-K 164 (417)
T ss_dssp CCCSSH-HHHHHHHHHHHSC--TTCEEEEECC----------------CCSEEEEECC-C-TTSSCCHHHHHHHHHHH-C
T ss_pred eEeccH-HHHHHHHHHHhcC--CCCEEEecccccccccchhhhhhhhcceeeeEeccC-C-CCCCcCHHHHHHHHHhc-C
Confidence 345555 8999999887755 99999999999988755 44444444 555554 2 45779999999998732 2
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccC-CCCCCCCCccchHHHHHhhhcCCeEEEEeccccccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAY-QGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMG 274 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~ 274 (337)
.+++++ ++||| |.+++ +++|+++|+++|++||+||+| .++.+.+... ..+ ....+++.||||.|
T Consensus 165 ~~~v~~-~~~~~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~-----~~~---~~~di~~~s~sK~l- 229 (417)
T 3n0l_A 165 PKLIVC-GASAY--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHP-----SPF---PYAHVVSSTTHKTL- 229 (417)
T ss_dssp CSEEEE-CCSSC--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSC-----CCT---TTCSEEEEESSTTT-
T ss_pred CeEEEE-CCccc--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCC-----Ccc---ccceEEEeeCcccc-
Confidence 345554 66776 77887 788999999999999999995 3332110000 001 11347889999988
Q ss_pred ccccccceeEeeeCCHHHHHHHHH
Q 047180 275 LYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 275 ~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
+|+|.||+++ +++++.+.+..
T Consensus 230 -~g~~~G~~~~--~~~~~~~~~~~ 250 (417)
T 3n0l_A 230 -RGPRGGIIMT--NDEELAKKINS 250 (417)
T ss_dssp -CSCSCEEEEE--SCHHHHHHHHH
T ss_pred -CCCCeeEEEE--CCHHHHHHHhh
Confidence 6999999886 45666665543
No 188
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.76 E-value=6.5e-18 Score=164.62 Aligned_cols=235 Identities=8% Similarity=-0.016 Sum_probs=140.8
Q ss_pred cchHHHHHHHH-hcCcC--CCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-----
Q 047180 70 VLECVREAERR-IAGTA--NMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF----- 141 (337)
Q Consensus 70 ~~~~v~~a~~~-~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~----- 141 (337)
.+|.+.+|+.+ +.... ...+.+.....+|++.+++++ +. ..+ .++.|+||++|+.+++.++...
T Consensus 92 ~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~-~~-----~~~--~v~~~~sGseA~~~Alk~a~~~~~~~g 163 (457)
T 3tfu_A 92 GHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDIT-PA-----GLD--TVFFSDSGSVSVEVAAKMALQYWRGRG 163 (457)
T ss_dssp TCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHS-ST-----TEE--EEEEESSHHHHHHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC-CC-----CcC--EEEEeCcHHHHHHHHHHHHHHHHHhcC
Confidence 45677776654 32111 111112223445666666654 11 123 3689999999999998776542
Q ss_pred -CCCCeEEEcCCCCcchHHHHHhcCc--------------eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCC-C
Q 047180 142 -HPDSQIYIPVPTWSNHHNIWRDAHV--------------TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHAC-A 205 (337)
Q Consensus 142 -~pgd~Vlv~~P~y~~y~~~~~~~G~--------------~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~-p 205 (337)
..+++|++.+|+|..+.......+. .+..++.........|++.+++.+++.+.+.++++..+ +
T Consensus 164 ~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~~~aavi~ep~~ 243 (457)
T 3tfu_A 164 LPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAGELAAVVVEPVV 243 (457)
T ss_dssp CTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGGGEEEEEECSSE
T ss_pred CCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCCCEEEEEEeCCC
Confidence 2346999999999887655544421 22223321111111378889888874323344444455 8
Q ss_pred CCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccc-ccccee
Q 047180 206 HNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCL 283 (337)
Q Consensus 206 ~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~ 283 (337)
|||+|.++ +++.+++|.++|+++|+++|+||+|.+|... . .......+ ...++++ ||||.++ .| +|+||+
T Consensus 244 ~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~-G--~~~a~~~~-~~~pdii---t~sK~l~-gG~~~lG~v 315 (457)
T 3tfu_A 244 QGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRT-G--ALFAADHA-GVSPDIM---CVGKALT-GGYLSLAAT 315 (457)
T ss_dssp ECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTT-S--SSSTHHHH-TCCCSEE---EECGGGG-TTSSCCEEE
T ss_pred cCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccc-c--chhHhHhc-CCCceEE---EEChhhh-CCCcceEEE
Confidence 99999876 8888999999999999999999999988531 1 11111111 2223444 8999887 35 799999
Q ss_pred EeeeCCHHHHHHHHHH-HHh-hhcccccCCChhHHHHHHHHhC
Q 047180 284 SVLCEDEKQAVAVKSQ-LQQ-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 284 ~~~~~~~~~~~~~~~~-l~~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
++ ++++.+.+... ... ....++ +.+.+++.++..+|+
T Consensus 316 ~~---~~~i~~~~~~~~~~~~~~~~t~-~~n~~a~aaa~aaL~ 354 (457)
T 3tfu_A 316 LC---TADVAHTISAGAAGALMHGPTF-MANPLACAVSVASVE 354 (457)
T ss_dssp EE---EHHHHHHHHHSSSCSCCCCCTT-TTCHHHHHHHHHHHH
T ss_pred EE---cHHHHHHhhccCCCceeEecCC-CcCHHHHHHHHHHHH
Confidence 86 45554444210 001 112233 457788888777775
No 189
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.76 E-value=1.9e-17 Score=162.02 Aligned_cols=253 Identities=11% Similarity=0.016 Sum_probs=150.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...+|+..|.....-| ..+|.|.+|+.+ +.. ..+.|....+..+.+..+++.+..... ...++ ++.++||++
T Consensus 55 ~~ylD~~s~~~~~~lG--h~~p~v~~A~~~~~~~-~~~~~~~~~~~~~~~~~lae~l~~~~~--~~~~~--v~~~~sGse 127 (472)
T 3hmu_A 55 EEILDAMAGLWCVNIG--YGRDELAEVAARQMRE-LPYYNTFFKTTHVPAIALAQKLAELAP--GDLNH--VFFAGGGSE 127 (472)
T ss_dssp CEEECTTHHHHTCTTC--BCCHHHHHHHHHHHHH-CSCCCSSSSEECHHHHHHHHHHHHHSC--TTEEE--EEEESSHHH
T ss_pred CEEEECCCchhhccCC--CCCHHHHHHHHHHHHh-ccccccccccCCHHHHHHHHHHHHhCC--CCCCE--EEEeCCHHH
Confidence 3467777663221122 135677776654 422 122343333444555555555533221 11233 688999999
Q ss_pred HHHHHHHHHhhh------CCCCeEEEcCCCCcchHHHHHhcCce------------eeEeeec---cCCCCCCC------
Q 047180 130 ACRLFADFQKRF------HPDSQIYIPVPTWSNHHNIWRDAHVT------------QRTFHYY---HPGTKGLD------ 182 (337)
Q Consensus 130 al~~~~~~l~~~------~pgd~Vlv~~P~y~~y~~~~~~~G~~------------~~~~~~~---~~~~~~~d------ 182 (337)
|+..++.++... .++++|++.+|+|..+.......+.. ++.++.. ...++ .|
T Consensus 128 A~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~ 206 (472)
T 3hmu_A 128 ANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGL 206 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHH
Confidence 999998877642 14689999999999987666544432 2233321 10112 34
Q ss_pred --hHHHHHHHHcC-CCCeEEEEeCCCCCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhh
Q 047180 183 --FAALMDDIKNA-PNGSFFLLHACAHNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLK 258 (337)
Q Consensus 183 --~~~l~~~l~~~-~~~~~ili~~~p~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 258 (337)
++.+++.+.+. +.+.++++..+++|++|.+. +++.+++|.++|+++|+++|+||+|.+|... . .......+ .
T Consensus 207 ~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~-G--~~~a~~~~-~ 282 (472)
T 3hmu_A 207 ARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRT-G--NWFGTQTM-G 282 (472)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTT-S--SSCHHHHH-T
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCccc-C--ccchhHHh-C
Confidence 67788777532 12344555455667777654 9999999999999999999999999998531 1 11112212 2
Q ss_pred cCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhh-hcccccCCChhHHHHHHHHhC
Q 047180 259 DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQL-ARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 259 ~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~~~~~~l~ 324 (337)
..++++ +|||.++-.|||+||+++ ++++++.+ .. ... ...++ +.+.++|.++..+|+
T Consensus 283 v~pdi~---t~sK~l~gg~~plG~v~~---~~~i~~~~-~~-~~~~~~~t~-~~np~a~aAa~aaL~ 340 (472)
T 3hmu_A 283 IRPHIM---TIAKGLSSGYAPIGGSIV---CDEVAHVI-GK-DEFNHGYTY-SGHPVAAAVALENLR 340 (472)
T ss_dssp CCCSEE---EECGGGTTTSSCCEEEEE---EHHHHHHH-TT-SCBCCCCTT-TTCHHHHHHHHHHHH
T ss_pred CCCcee---eechhhhcCCcceEEEEE---CHHHHHhc-cc-CCccccCCC-CCCHHHHHHHHHHHH
Confidence 223443 589999865599999986 45554443 10 111 12234 457788888888876
No 190
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.75 E-value=3.4e-17 Score=155.61 Aligned_cols=198 Identities=14% Similarity=0.026 Sum_probs=134.4
Q ss_pred cccchHHHHHHHHh-cCcCCCCCCCCCCCHHHHHHH-HHHHhCCCCcccccCceeEEeeccchhHHHHHHHHH-hhhCCC
Q 047180 68 PVVLECVREAERRI-AGTANMEYLPMGGSVKMVEET-LKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQ-KRFHPD 144 (337)
Q Consensus 68 ~~~~~~v~~a~~~~-~~~~~~~Y~~~~G~~~lr~ai-a~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l-~~~~pg 144 (337)
..+++.+.+++.+. ..+....|+| ...+|++++ |+|+ +. .+ .++.|.+|+.|+.+++..+ .. ||
T Consensus 12 ~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~-g~------~~--~~v~~~sgt~al~~al~~l~~~--~G 78 (377)
T 3ju7_A 12 TVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFF-QN------RG--AVTTVANATLGLMAAIQLKKRK--KG 78 (377)
T ss_dssp CCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTS-TT------CS--EEEEESCHHHHHHHHHHHHSCT--TC
T ss_pred CCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHh-CC------CC--eEEEeCCHHHHHHHHHHHcCCC--Cc
Confidence 44556666666553 3222111333 467899999 9986 31 11 2478899999999888765 44 99
Q ss_pred CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHH
Q 047180 145 SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 145 d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~ 224 (337)
|+|++++|+|+.+...++..|++++.+++ +++++.+|++++++++...+.++.+++ |+||||.+.+ +++|.++
T Consensus 79 d~Vi~~~~~~~~~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~l 151 (377)
T 3ju7_A 79 KYALMPSFTFPATPLAAIWCGLEPYFIDI-SIDDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEEL 151 (377)
T ss_dssp CEEEEESSSCTHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHH
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEec-CCccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHH
Confidence 99999999999999999999999999998 444689999999998832111144444 6899999876 5667788
Q ss_pred HHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEec--ccccccccccccceeEeeeCCHHHHHHHHH
Q 047180 225 IKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQS--YAKNMGLYGQRVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 225 ~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S--~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~ 298 (337)
|+ +|++||+|++|..... +. . ..+. ....+ +.+.| .+|.++. | +.|+++. .++++.+++..
T Consensus 152 a~-~~~~vi~D~a~a~g~~--~~-~-~~~g--~~~~d--~~~~S~~~~K~l~~-g-~gG~~~~--~~~~l~~~~~~ 214 (377)
T 3ju7_A 152 EK-KGVPVVVDAAPGFGLM--NG-G-MHYG--QDFSG--MIIYSFHATKPFGI-G-EGGLIYS--KNEEDIQRIKR 214 (377)
T ss_dssp HH-TTCCBEEECTTCTTCE--ET-T-EETT--TTCSS--EEEEECBTTSSSCC-B-SCEEEEE--SCHHHHHHHHH
T ss_pred Hh-cCCEEEEECCCccCCe--EC-C-Eecc--CCCCc--EEEEECCCCCcCCC-C-CcEEEEE--CCHHHHHHHHH
Confidence 88 9999999999864321 00 0 0010 00122 33445 4699985 6 6787764 67777666543
No 191
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.75 E-value=1.7e-17 Score=160.30 Aligned_cols=183 Identities=8% Similarity=-0.108 Sum_probs=132.0
Q ss_pred chHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh-------hhC
Q 047180 71 LECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK-------RFH 142 (337)
Q Consensus 71 ~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~-------~~~ 142 (337)
.+.+.+++.+ +.. ..|.+..+..+||+++++++ +.. ..+.+.+|++++.+++..+. ...
T Consensus 42 ~~~~~~a~~~~~~~---~~~~~~~~~~~l~~~la~~~-g~~---------~~i~~~sGt~a~~~al~~l~~~~~~~~~~~ 108 (437)
T 3bb8_A 42 GTKELQLMVEASLD---GWLTTGRFNDAFEKKLGEYL-GVP---------YVLTTTSGSSANLLALTALTSPKLGVRALK 108 (437)
T ss_dssp CHHHHHHHHHHHHH---CCCBSCHHHHHHHHHHHHHH-TCS---------EEEEESCHHHHHHHHHHHTTCGGGGGGSCC
T ss_pred CHHHHHHHHHHHHc---CCcCCChHHHHHHHHHHHHH-CCC---------cEEEeCCHHHHHHHHHHHhhhcccccccCC
Confidence 3455555443 321 23556668899999999997 321 14677888899999887762 023
Q ss_pred CCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHH
Q 047180 143 PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEIS 222 (337)
Q Consensus 143 pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~ 222 (337)
+||+|+++.|+|+.+...++..|++++.+++. ++++.+|++.+++.+.. +.+++++.++|+|| ..+++|+
T Consensus 109 ~gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~i~~--~~~~v~~~~~~g~~-------~~~~~i~ 178 (437)
T 3bb8_A 109 PGDEVITVAAGFPTTVNPTIQNGLIPVFVDVD-IPTYNVNASLIEAAVSD--KTKAIMIAHTLGNL-------FDLAEVR 178 (437)
T ss_dssp TTCEEEECSSSCHHHHHHHHHTTCEEEECCEE-TTTTEECGGGHHHHCCT--TEEEEEEECGGGCC-------CCHHHHH
T ss_pred CcCEEEECCCCcHHHHHHHHHcCCEEEEEecc-CccCCcCHHHHHHhcCC--CCeEEEEeCCCCCh-------hcHHHHH
Confidence 89999999999999999999999999999884 33578899999998853 33445543357777 4688899
Q ss_pred HHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 223 YQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 223 ~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
++|+++++++|+|++|......+. ..+... .+ +++.||||+++++|.|.|+++.
T Consensus 179 ~l~~~~~~~li~D~a~~~g~~~~~-------~~~~~~-~d-~~~~s~~~~k~l~~g~gg~~~~ 232 (437)
T 3bb8_A 179 RVADKYNLWLIEDCCDALGSTYDG-------KMAGTF-GD-IGTVSFYPAKHITMGEGGAVFT 232 (437)
T ss_dssp HHHHHHTCEEEEECTTCTTCEETT-------EETTSS-SS-EEEEECSTTSSSCCSSCEEEEE
T ss_pred HHHHHcCCEEEEECccccCceECC-------eecccc-cC-EEEEECcCCcCCCCCCeEEEEe
Confidence 999999999999999974321011 001111 22 6678999999999999999875
No 192
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.75 E-value=5e-17 Score=155.77 Aligned_cols=189 Identities=14% Similarity=0.050 Sum_probs=130.6
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH-----HhcCceee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW-----RDAHVTQR 169 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~-----~~~G~~~~ 169 (337)
..+|++.++++. +. + ..+++++|++|+.++ ..+.+ +||+|++++|+|+.....+ +..|.+++
T Consensus 69 ~~~l~~~la~l~-g~-------~--~~~~~~sG~~Ai~~~-~~l~~--~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~ 135 (400)
T 3nmy_A 69 RFAYERCVAALE-GG-------T--RAFAFASGMAATSTV-MELLD--AGSHVVAMDDLYGGTFRLFERVRRRTAGLDFS 135 (400)
T ss_dssp HHHHHHHHHHHH-TC-------S--EEEEESSHHHHHHHH-HTTSC--TTCEEEEESSCCHHHHHHHHHTHHHHHCCEEE
T ss_pred HHHHHHHHHHHh-CC-------C--CEEEecCHHHHHHHH-HHHcC--CCCEEEEeCCCchHHHHHHHHhhHhhcCeEEE
Confidence 356788888865 21 1 145677779998874 33333 8999999999999555443 34699988
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++.. |++.+++++.+ ++.++++++|+||||.+++ +++|+++|+++|+++|+||+|...... .
T Consensus 136 ~v~~~-------d~~~l~~~i~~---~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~---~- 198 (400)
T 3nmy_A 136 FVDLT-------DPAAFKAAIRA---DTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ---R- 198 (400)
T ss_dssp EECTT-------SHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC---C-
T ss_pred EECCC-------CHHHHHHHhcc---CCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC---C-
Confidence 88651 78999988852 3445555899999999996 888999999999999999999643211 0
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccce-eEeeeCCHHHHHHHHHHHHhhhcccccCCChhHHHHHHHHhCC
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGC-LSVLCEDEKQAVAVKSQLQQLARPMYSNPPVHGALIVSTILGD 325 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~ 325 (337)
+ + .. ...+++.|+||.++-+|.++|. +++ ..++++.+++..... ..-.+.+.+.+.++...++.
T Consensus 199 --~---~-~~-g~div~~S~sK~l~g~g~~~gG~~vv-~~~~~~~~~l~~~~~----~~g~~~~~~~a~~~l~~l~~ 263 (400)
T 3nmy_A 199 --P---L-SL-GADLVVHSATKYLNGHSDMVGGIAVV-GDNAELAEQMAFLQN----SIGGVQGPFDSFLALRGLKT 263 (400)
T ss_dssp --G---G-GG-TCSEEEEETTTTTTCSSSCCCEEEEE-CSCHHHHHHHHHHHH----HHCCBCCHHHHHHHHHHHTT
T ss_pred --h---h-hc-CCcEEEecCccccCCCCCcceeEEEE-eCCHHHHHHHHHHHH----hcCCCCCHHHHHHHHHhHhH
Confidence 0 1 11 2458889999999989999988 443 357776666554222 12224555666666666654
No 193
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.74 E-value=3.2e-17 Score=157.95 Aligned_cols=184 Identities=14% Similarity=0.043 Sum_probs=131.4
Q ss_pred cccchHHHHHHHHh-cCcCCCCCCCCCC--CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCC
Q 047180 68 PVVLECVREAERRI-AGTANMEYLPMGG--SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPD 144 (337)
Q Consensus 68 ~~~~~~v~~a~~~~-~~~~~~~Y~~~~G--~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg 144 (337)
.+..+.+.++.... .....+.|+...+ ..+|++.+++++ +.. + .+.+++|++|+.+++..+.. +|
T Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~-g~~------~---~v~~~sGt~A~~~~l~~~~~--~g 97 (421)
T 2ctz_A 30 SYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALE-GGK------A---ALATASGHAAQFLALTTLAQ--AG 97 (421)
T ss_dssp CBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHH-TCS------E---EEEESSHHHHHHHHHHHHCC--TT
T ss_pred eeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHh-CCC------c---eEEecCHHHHHHHHHHHHhC--CC
Confidence 34455555544433 1222345654332 467999999987 321 1 24556669999998877654 89
Q ss_pred CeEEEcCCCCcchHHHH----HhcCceeeEe-eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHH
Q 047180 145 SQIYIPVPTWSNHHNIW----RDAHVTQRTF-HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWK 219 (337)
Q Consensus 145 d~Vlv~~P~y~~y~~~~----~~~G~~~~~~-~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~ 219 (337)
|+|+++.|.|+.+...+ +..|++++.+ +.. |++++++.++. +..++++++|+||||.+++ ++
T Consensus 98 d~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-------d~~~l~~~i~~---~~~~v~~~~~~n~~G~~~~---l~ 164 (421)
T 2ctz_A 98 DNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREE-------RPEEFLALTDE---KTRAWWVESIGNPALNIPD---LE 164 (421)
T ss_dssp CEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTC-------CHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HH
T ss_pred CEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCC-------CHHHHHHhhcc---CCeEEEEECCCCCCCcccC---HH
Confidence 99999999999987765 7789998887 541 78999988853 3444555899999999998 78
Q ss_pred HHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 220 EISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 220 ~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
+|+++|+++|+++|+|++|..+... . . +. ..+ .-+++.|+||.++.+|.|+|++++.
T Consensus 165 ~i~~~a~~~g~~livD~~~~~~g~~-~--~--~~----~~~-~Di~~~s~~K~l~~~g~~~G~~~~~ 221 (421)
T 2ctz_A 165 ALAQAAREKGVALIVDNTFGMGGYL-L--R--PL----AWG-AALVTHSLTKWVGGHGAVIAGAIVD 221 (421)
T ss_dssp HHHHHHHHHTCEEEEECGGGGGGTS-C--C--GG----GGT-CSEEEEETTTTTTCSSCCCCEEEEE
T ss_pred HHHHHHHHcCCEEEEECCccccccc-C--C--cc----ccC-CeEEEECCcccccCCCCcEEEEEEe
Confidence 8999999999999999999333211 1 1 11 112 3478889999999999999999874
No 194
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.74 E-value=5e-17 Score=157.17 Aligned_cols=157 Identities=15% Similarity=0.029 Sum_probs=120.1
Q ss_pred CCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH----HHHhcCceee
Q 047180 94 GSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN----IWRDAHVTQR 169 (337)
Q Consensus 94 G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~----~~~~~G~~~~ 169 (337)
...+|++.+++++ +.. . .+.+.+|++|+.+++..+.+ |||+|++++|+|+.+.. .++..|.+++
T Consensus 83 ~~~~le~~lA~l~-g~~-------~--~v~~~sG~~Ai~~al~al~~--~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~ 150 (430)
T 3ri6_A 83 TVEDLEQRLKNLT-GAL-------G--VLALGSGMAAISTAILTLAR--AGDSVVTTDRLFGHTLSLFQKTLPSFGIEVR 150 (430)
T ss_dssp HHHHHHHHHHHHH-TCS-------E--EEEESCHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHHTHHHHTTCEEE
T ss_pred HHHHHHHHHHHHH-CCC-------c--EEEECCHHHHHHHHHHHHhC--CCCEEEEcCCCchhHHHHHHHHHHHcCCEEE
Confidence 4567888999876 321 1 35666778999988877755 99999999999999887 6678999999
Q ss_pred EeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccc
Q 047180 170 TFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERD 249 (337)
Q Consensus 170 ~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~ 249 (337)
.++.. |++.+++++.. ++.++++++|+||||.+++ +++|+++|+++|+++|+|++|...... .
T Consensus 151 ~v~~~-------d~~~l~~ai~~---~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~---~- 213 (430)
T 3ri6_A 151 FVDVM-------DSLAVEHACDE---TTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL---E- 213 (430)
T ss_dssp EECTT-------CHHHHHHHCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC---C-
T ss_pred EeCCC-------CHHHHHHhhCC---CCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC---C-
Confidence 88751 78999988852 3455556899999999997 667889999999999999999754321 1
Q ss_pred hHHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 250 AKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 250 ~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
+. ..+ ..+++.|+||.+|-+|..+|.+++.
T Consensus 214 --~~----~~g-~div~~S~sK~l~g~g~~~gG~vv~ 243 (430)
T 3ri6_A 214 --AK----RLG-VDIEVLSSTKFISGGGTSVGGVLID 243 (430)
T ss_dssp --GG----GGT-CSEEEEECCCEEETTEEECCEEEEE
T ss_pred --hH----HcC-CEEEEECCcccccCCCCceEEEEEE
Confidence 01 112 3578899999999888878877763
No 195
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.73 E-value=1.5e-17 Score=158.98 Aligned_cols=154 Identities=16% Similarity=0.116 Sum_probs=97.9
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc---hHHHHHhcCc--eeeEeeeccCCCCCCChHHHHHHHHcCCCC
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSN---HHNIWRDAHV--TQRTFHYYHPGTKGLDFAALMDDIKNAPNG 196 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~---y~~~~~~~G~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 196 (337)
++++||++++.+++..+.. |||+|++++|+|+. +.......|. +++.++. +++++.+|++.+++.+.+. +.
T Consensus 98 v~~~~Gs~a~~~al~~~~~--~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~i~~~-~~ 173 (425)
T 3ecd_A 98 VQPHSGAQANGAVMLALAK--PGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGV-SRDTMLIDYDQVEALAQQH-KP 173 (425)
T ss_dssp CCCSSHHHHHHHHHHHHCC--TTCEEEEECC------------------CEEEEECC-CTTTSSCCHHHHHHHHHHH-CC
T ss_pred eecCchHHHHHHHHHHccC--CCCEEEEcccccccceecchhhhhcccceeeeecCC-CcccCccCHHHHHHHHhhc-CC
Confidence 4588889999888877755 99999999999988 4434335565 4445554 3345889999999988632 23
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccC-CCCCCCCCccchHHHHHhhhcCCeEEEEecccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAY-QGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGL 275 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~ 275 (337)
+++++ ++|+||+. ..+++|+++|+++|++||+||+| .++.+.+. .. ..+ .. --+++.||||.|
T Consensus 174 ~~v~~-~~~~~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~--~~---~~~-~~--~di~~~s~sK~l-- 237 (425)
T 3ecd_A 174 SLIIA-GFSAYPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGR--HA---NPV-EH--AHVVTSTTHKTL-- 237 (425)
T ss_dssp SEEEE-ECSCCCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTS--SC---CGG-GT--CSEEEEESSGGG--
T ss_pred cEEEE-ccccCCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhccc--cc---Cch-hc--CcEEEecCCccc--
Confidence 45555 67999854 34689999999999999999994 33322100 00 001 11 127789999998
Q ss_pred cccccceeEeeeCCHHHHHHHH
Q 047180 276 YGQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 276 ~G~RvG~~~~~~~~~~~~~~~~ 297 (337)
+|+|.||+++ +++.+.+.+.
T Consensus 238 ~g~~~g~~~~--~~~~~~~~~~ 257 (425)
T 3ecd_A 238 RGPRGGFVLT--NDEEIAKKIN 257 (425)
T ss_dssp CCCSCEEEEE--SCHHHHHHHH
T ss_pred CCCCcEEEEe--CCHHHHHHHH
Confidence 6889999986 4555555443
No 196
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.73 E-value=1.4e-18 Score=162.75 Aligned_cols=191 Identities=8% Similarity=-0.040 Sum_probs=122.4
Q ss_pred eeEeeeeeeecCCCCcccchHHHHHHHHh-cCc---CCCCCCC---CCC----CHHHHHHHHHHHhCCCCcccccCceeE
Q 047180 53 KVNVGVGAYRDDNGKPVVLECVREAERRI-AGT---ANMEYLP---MGG----SVKMVEETLKLAYGDNSEFIKDKRIAA 121 (337)
Q Consensus 53 ~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~---~~~~Y~~---~~G----~~~lr~aia~~~~~~~~~~~~~~~i~~ 121 (337)
++++..|. +.+++.+.+++.+. ... ....|.. ..| ..++++.+++++ +.. ++++ +
T Consensus 4 ~~~~~~g~-------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~-g~~----~~~~--v 69 (360)
T 1w23_A 4 VFNFNAGP-------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL-QIP----NDYQ--I 69 (360)
T ss_dssp CEECCSSS-------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH-TCC----TTEE--E
T ss_pred eEeecCCC-------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHh-CCC----CCce--E
Confidence 45565552 34567788877653 211 0111221 122 346777777765 321 1233 5
Q ss_pred Eeeccc-hhHHHHHHHHHhhh-CCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHH-HHHcCCCCeE
Q 047180 122 VQSLSG-TGACRLFADFQKRF-HPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMD-DIKNAPNGSF 198 (337)
Q Consensus 122 ~~t~g~-~~al~~~~~~l~~~-~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~-~l~~~~~~~~ 198 (337)
++|+|+ ++++.+++..+... .+||.|+++.++|+. ...++..| +++.+++..+ ++.+|++++++ .+. +++.
T Consensus 70 ~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~-~~~~d~~~l~~~~i~---~~~k 143 (360)
T 1w23_A 70 LFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKA-NSYQSIPDFSEFQLN---ENDA 143 (360)
T ss_dssp EEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGG-GTSCSCCCGGGCCCC---TTEE
T ss_pred EEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccc-cCcCCccchHhhccC---CCCC
Confidence 788888 99999988666541 136777877777654 34467789 9999998432 23478888877 663 2344
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccc
Q 047180 199 FLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ 278 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 278 (337)
++++++||||||.+++ ++. +++|++||+||+|..+... . + +. .. -+++.|+||.||++|
T Consensus 144 ~v~~~~~~nptG~~~~--~i~------~~~~~~li~D~a~~~~~~~-~--~---~~---~~---di~~~s~sK~~~~~G- 202 (360)
T 1w23_A 144 YLHITSNNTIYGTQYQ--NFP------EINHAPLIADMSSDILSRP-L--K---VN---QF---GMIYAGAQKNLGPSG- 202 (360)
T ss_dssp EEEEESEETTTTEECS--SCC------CCCSSCEEEECTTTTTSSC-C--C---GG---GC---SEEEEETTTTTSCTT-
T ss_pred EEEEeCCCCCcceecc--ccc------ccCCceEEEechhhcCCCC-c--C---cc---cC---CEEEEEcccccCCCC-
Confidence 5555899999999998 322 2799999999999876421 1 1 11 11 278899999999777
Q ss_pred ccceeEe
Q 047180 279 RVGCLSV 285 (337)
Q Consensus 279 RvG~~~~ 285 (337)
+||+++
T Consensus 203 -~G~~~~ 208 (360)
T 1w23_A 203 -VTVVIV 208 (360)
T ss_dssp -CEEEEE
T ss_pred -cEEEEE
Confidence 999986
No 197
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.73 E-value=5e-17 Score=157.78 Aligned_cols=202 Identities=13% Similarity=0.038 Sum_probs=137.1
Q ss_pred cchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCc---eeEEeeccchhHHHHHHHHHhh-h----
Q 047180 70 VLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKR---IAAVQSLSGTGACRLFADFQKR-F---- 141 (337)
Q Consensus 70 ~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~---i~~~~t~g~~~al~~~~~~l~~-~---- 141 (337)
..+.+.+++...-.....+|....|..++.+.+.+++.+..+. +.+. ..+++|.||++++.+++..+.. +
T Consensus 54 ~~~~v~e~~~~a~~~~~~~~~~~~~~~~l~~~~~~~la~l~g~--~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~ 131 (452)
T 2dgk_A 54 DDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHA--PAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM 131 (452)
T ss_dssp CCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTC--CCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHhccCCCChhhChhHHHHHHHHHHHHHHHhCC--CcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 3466777766531222344655567777888887776432221 1121 1357899999999888766542 0
Q ss_pred -CCC-----CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCH
Q 047180 142 -HPD-----SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSE 215 (337)
Q Consensus 142 -~pg-----d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~ 215 (337)
.+| ++|++++ +|+.|...++..|++++.+|+. ++++.+|++++++++.+ ++++|+.++|+||||.+.+
T Consensus 132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~---~t~~v~~~~~~n~tG~~~~- 205 (452)
T 2dgk_A 132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMR-PGQLFMDPKRMIEACDE---NTIGVVPTFGVTYTGNYEF- 205 (452)
T ss_dssp HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCB-TTBCSCCHHHHHHHCCT---TEEEEECBBSCTTTCBBCC-
T ss_pred HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecC-CCCCeECHHHHHHHHhh---CCEEEEEEcCCcCCcccCC-
Confidence 034 5999999 9999999999999999999984 33588999999998863 3556666899999999965
Q ss_pred HHHHHHHHHHHhc------CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 216 EQWKEISYQIKAK------GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 216 ~~~~~l~~~~~~~------~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+++|+++|+++ ++++++|++|.++...-..... .. .+ ....--+++.|++| |+++|+|+||+++
T Consensus 206 --l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~-~~-~~~~~d~~~~~~hK-~~~~~~~~G~~~~ 275 (452)
T 2dgk_A 206 --PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDI-VW-DF-RLPRVKSISASGHK-FGLAPLGCGWVIW 275 (452)
T ss_dssp --HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTC-CC-ST-TSTTEEEEEEETTT-TTCCCSSCEEEEE
T ss_pred --HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccc-hh-hc-CCCCCcEEEECccc-ccCCCCCeEEEEE
Confidence 66788888884 9999999999886410000000 00 01 11112234567889 6678999999987
No 198
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.73 E-value=8.8e-17 Score=154.77 Aligned_cols=165 Identities=11% Similarity=0.048 Sum_probs=121.4
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~~ 170 (337)
..+|++.+|+++ +. +. .+++.||++|+.+++..+.+ |||+|++++|.|+.....+ +..|.+++.
T Consensus 84 ~~~le~~lA~l~-g~-------~~--~i~~ssGt~Ai~~al~~l~~--~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~ 151 (415)
T 2fq6_A 84 HFSLQQAMCELE-GG-------AG--CVLFPCGAAAVANSILAFIE--QGDHVLMTNTAYEPSQDFCSKILSKLGVTTSW 151 (415)
T ss_dssp HHHHHHHHHHHH-TC-------SE--EEEESSHHHHHHHHHHTTCC--TTCEEEEETTSCHHHHHHHHHTGGGGTCEEEE
T ss_pred HHHHHHHHHHHh-CC-------Ce--EEEeCCHHHHHHHHHHHHhC--CCCEEEEeCCCchHHHHHHHHHHHHcCcEEEE
Confidence 456999999986 31 11 35678889999988876655 8999999999999877654 457888887
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh--cCceeEEcccCCCCCCCCCcc
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKA--KGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~--~~~~ii~De~Y~~~~~~~~~~ 248 (337)
++. .|+++++++++. ++.+|++++||||||.+++ +++|+++|++ +|+++|+|++|...... .
T Consensus 152 v~~-------~d~~~le~ai~~---~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~---~ 215 (415)
T 2fq6_A 152 FDP-------LIGADIVKHLQP---NTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF---K 215 (415)
T ss_dssp ECT-------TCGGGGGGGCCT---TEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS---C
T ss_pred ECC-------CCHHHHHHhhcc---CCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC---C
Confidence 754 278888887752 3455555899999999996 6788999999 99999999999765321 1
Q ss_pred chHHHHHhhhcCCeEEEEeccccccccccccc-ceeEeeeCCHHHHHHHHH
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~~~~~~~~~~~~~~ 298 (337)
++ ..+ ..+++.|+||.+|.+|.++ ||+++ +++.++++..
T Consensus 216 ---p~----~~g-~Div~~S~sK~lg~~g~~~~G~l~~---~~~~~~~l~~ 255 (415)
T 2fq6_A 216 ---AL----DFG-IDVSIQAATKYLVGHSDAMIGTAVC---NARCWEQLRE 255 (415)
T ss_dssp ---GG----GGT-CSEEEEETTTTTTCSSSCCCEEEEE---CTTTHHHHHH
T ss_pred ---cc----ccC-CeEEEEeCccccCCCCCceEEEEEe---CHHHHHHHHH
Confidence 11 112 3578899999999998764 88765 3345555543
No 199
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.72 E-value=8.5e-17 Score=153.61 Aligned_cols=157 Identities=15% Similarity=0.089 Sum_probs=109.2
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh----CCCCe-EEEcCCCCcchHHHHH----hc-
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF----HPDSQ-IYIPVPTWSNHHNIWR----DA- 164 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~----~pgd~-Vlv~~P~y~~y~~~~~----~~- 164 (337)
..++++.+++++ +. ++++ ++.|+|+++++.+++..+..+ .|||+ |+++.++|+.+...+. ..
T Consensus 73 ~~~l~~~la~~~-g~-----~~~~--v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~ 144 (416)
T 1qz9_A 73 SERLGNRLATLI-GA-----RDGE--VVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQ 144 (416)
T ss_dssp HHHHHHHHHTTT-TC-----CTTS--EEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHc-CC-----Cccc--EEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhc
Confidence 456777777664 21 2344 467899999998777665422 38987 5555668886654332 23
Q ss_pred -CceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCC
Q 047180 165 -HVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFAS 243 (337)
Q Consensus 165 -G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~ 243 (337)
|++++.+|+ ++++++.+.. +..++++++||||||.+++ +++|+++|+++|+++|+||+|..-.
T Consensus 145 ~g~~~~~v~~---------~~~l~~~i~~---~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~- 208 (416)
T 1qz9_A 145 QGYTLRLVDS---------PEELPQAIDQ---DTAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAGA- 208 (416)
T ss_dssp SSCEEEEESS---------GGGHHHHCST---TEEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT-
T ss_pred CCceEEEeCc---------HHHHHHHhCC---CceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccccC-
Confidence 888888764 6788887752 3455666899999999998 6889999999999999999996311
Q ss_pred CCCccchHHHHHhhhcCCeEEEEeccccccccccccc-ceeEe
Q 047180 244 GDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRV-GCLSV 285 (337)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~Rv-G~~~~ 285 (337)
...+ +..+ + ..+++.|++|.++ +|.|+ ||+++
T Consensus 209 --~~~~---~~~~---~-~d~~~~s~~K~l~-~g~~~~g~l~~ 241 (416)
T 1qz9_A 209 --VPVD---LHQA---G-ADYAIGCTYKYLN-GGPGSQAFVWV 241 (416)
T ss_dssp --SCCC---HHHH---T-CSEEEECSSSTTC-CCTTCCCEEEE
T ss_pred --cCCC---hhhc---C-CCEEEecCcccCC-CCCCCeEEEEE
Confidence 1111 1111 2 3477889999985 68888 99986
No 200
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.71 E-value=3.8e-17 Score=158.57 Aligned_cols=212 Identities=16% Similarity=0.103 Sum_probs=131.3
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCC---CCCHHHH--HHHH-HHHhCCCCcccccCceeEEee
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPM---GGSVKMV--EETL-KLAYGDNSEFIKDKRIAAVQS 124 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~---~G~~~lr--~aia-~~~~~~~~~~~~~~~i~~~~t 124 (337)
+.|+|..+ .++ .+|.+.+|+.+ +......+|+.. .|...++ ++++ +++....+. +.+ .+++
T Consensus 46 ~~i~l~~~------~~~-~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~----~~~-~v~~ 113 (447)
T 3h7f_A 46 DTLEMIAS------ENF-VPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGA----EFA-NVQP 113 (447)
T ss_dssp HSEECCTT------CCC-CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC----SEE-ECCC
T ss_pred CceeEecC------CCC-CCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCC----Cce-EEEe
Confidence 46777543 223 47778887654 322222344432 3555444 4344 443221111 122 3447
Q ss_pred ccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH---HHHHh--cCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 125 LSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH---NIWRD--AHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 125 ~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~---~~~~~--~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
++|++++..++..+.+ |||+|++++|+|+.|. ..+.. .+..++++++ +++++.+|++++++.+... +.+++
T Consensus 114 ~sGs~a~~~a~~~~~~--~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~i~~~-~~~~i 189 (447)
T 3h7f_A 114 HSGAQANAAVLHALMS--PGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGV-DPATHLIDMDAVRATALEF-RPKVI 189 (447)
T ss_dssp SSHHHHHHHHHHHHCC--TTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECC-CTTTCSCCHHHHHHHHHHH-CCSEE
T ss_pred CCHHHHHHHHHHHhcC--CCCEEEecCcccccccchhhhhhhcCCeeEEEEcCc-CcccCCcCHHHHHHHHHhc-CCeEE
Confidence 7888899888877765 9999999999998732 11122 3345666665 3345779999999988642 22344
Q ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccC-CCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccccc
Q 047180 200 LLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAY-QGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQ 278 (337)
Q Consensus 200 li~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~ 278 (337)
++ ++|+||++. ++++|.++|+++|+++|+||+| .++.+.+.... .+ . . --+++.|+||+++ |+
T Consensus 190 ~~-~~~~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~-----~~-~-~-~di~~~s~sK~l~--G~ 253 (447)
T 3h7f_A 190 IA-GWSAYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPS-----PV-P-H-ADVVSTTVHKTLG--GG 253 (447)
T ss_dssp EE-ECSSCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCC-----ST-T-T-CSEEEEESSGGGC--CC
T ss_pred EE-cCCCCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCC-----CC-C-C-CcEEEecCCcCCC--CC
Confidence 44 789999987 6889999999999999999996 33322111000 01 1 1 1267899999885 89
Q ss_pred ccceeEeeeCCHHHHHHHHH
Q 047180 279 RVGCLSVLCEDEKQAVAVKS 298 (337)
Q Consensus 279 RvG~~~~~~~~~~~~~~~~~ 298 (337)
|.||+++ ++++++.+..
T Consensus 254 ~gG~i~~---~~~~~~~l~~ 270 (447)
T 3h7f_A 254 RSGLIVG---KQQYAKAINS 270 (447)
T ss_dssp SCEEEEE---CGGGHHHHHH
T ss_pred CeEEEEE---CHHHHHHHhh
Confidence 9999876 4555555543
No 201
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.71 E-value=6.8e-18 Score=158.55 Aligned_cols=171 Identities=12% Similarity=0.098 Sum_probs=111.8
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCC-Ccch-HHHHHhcCceeeEeeeccCCCCC--CChHHHHHHHHcCCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPT-WSNH-HNIWRDAHVTQRTFHYYHPGTKG--LDFAALMDDIKNAPNG 196 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~-y~~y-~~~~~~~G~~~~~~~~~~~~~~~--~d~~~l~~~l~~~~~~ 196 (337)
++.|.|+++++.+++..+.. |||+|++++|. |..+ ...++..| +++.+++..+.+++ +|.++++ +. ++
T Consensus 71 i~~t~g~t~a~~~~~~~l~~--~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~---~~ 142 (362)
T 2c0r_A 71 LFIQGGASTQFAMIPMNFLK--EGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQ---DN 142 (362)
T ss_dssp EEESSHHHHHHHHHHHHHCC--TTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CC---TT
T ss_pred EEECCCchHHHHHHHHhcCC--CCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cC---CC
Confidence 45778999999999887765 99999988776 4433 46677789 99999874211233 4655543 32 23
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
+.++++++||||||.+++ ++++| +|+++|+|++|...... . + +.+ . .+++.|+||.||++
T Consensus 143 t~~v~~~~~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~~-~--~------~~~-~--d~~~~s~~K~~g~~ 202 (362)
T 2c0r_A 143 AAYLHLTSNETIEGAQFK--AFPDT------GSVPLIGDMSSDILSRP-F--D------LNQ-F--GLVYAGAQKNLGPS 202 (362)
T ss_dssp EEEEEEESEETTTTEECS--SCCCC------TTSCEEEECTTTTTSSC-C--C------GGG-C--SEEEEETTTTTCCS
T ss_pred cCEEEEeCCcCccceecc--ccccc------CCCEEEEEChhhccCCc-c--c------hhH-C--cEEEEeccccccCc
Confidence 455555889999999866 35554 89999999999765321 1 1 111 1 36778999999999
Q ss_pred ccccceeEeeeCCHHHHHHHHHHHHh--------hhcccccCCChhHHHHHHHHhC
Q 047180 277 GQRVGCLSVLCEDEKQAVAVKSQLQQ--------LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
| +||+++. +++++++...... .......+++.+.|.++..+|+
T Consensus 203 G--~G~l~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~ 253 (362)
T 2c0r_A 203 G--VTVVIVR---EDLVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLK 253 (362)
T ss_dssp S--CEEEEEE---GGGSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHH
T ss_pred C--cEEEEEc---HHHHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHH
Confidence 9 9999873 3332222110000 0112234677888888888876
No 202
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.71 E-value=2.7e-17 Score=159.73 Aligned_cols=246 Identities=9% Similarity=0.006 Sum_probs=142.2
Q ss_pred CeeEeeeeeeecCCCCcccchHHH-H-HHHH----hcCcCCCCCCC---CCCCHHHHHHHHHHHhCCCCcccccCceeEE
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVR-E-AERR----IAGTANMEYLP---MGGSVKMVEETLKLAYGDNSEFIKDKRIAAV 122 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~-~-a~~~----~~~~~~~~Y~~---~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~ 122 (337)
..+|++.|.+...-| ..+|.|. + |+.+ +... . .|++ .....++++.+++++-. ...++ ++
T Consensus 55 ~ylD~~~~~~~~~lG--~~~p~v~~~~A~~~~~~~~~~~-~-~~~~~~~~~~~~~la~~la~~~~~-----~~~~~--v~ 123 (449)
T 2cjg_A 55 RYLDMFTFVASSALG--MNPPALVDDREFHAELMQAALN-K-PSNSDVYSVAMARFVETFARVLGD-----PALPH--LF 123 (449)
T ss_dssp EEEESSHHHHTCSSC--BSCHHHHTCHHHHHHHHHHHTC-C-CCTTTCCCHHHHHHHHHHHHHHCC-----TTCCE--EE
T ss_pred EEEEccCCccccCCC--CCCHHHHHHHHHHHHHHHHHhc-C-CCCcccCCHHHHHHHHHHHHhcCC-----CCCCE--EE
Confidence 467876664321112 1255666 5 5544 3221 1 1321 11234566777776521 11333 57
Q ss_pred eeccchhHHHHHHHHHhhh-----------CC-CCeEEEcCCCCcchHHHH-HhcCc-------------eeeEeeeccC
Q 047180 123 QSLSGTGACRLFADFQKRF-----------HP-DSQIYIPVPTWSNHHNIW-RDAHV-------------TQRTFHYYHP 176 (337)
Q Consensus 123 ~t~g~~~al~~~~~~l~~~-----------~p-gd~Vlv~~P~y~~y~~~~-~~~G~-------------~~~~~~~~~~ 176 (337)
.|+||++|+..++.++..+ .| ||+|++.+|+|+.+.... ...|. .++.+|..+.
T Consensus 124 ~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 203 (449)
T 2cjg_A 124 FVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRP 203 (449)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCT
T ss_pred EeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCc
Confidence 8999999999988654311 12 899999999999876532 22321 3444444210
Q ss_pred CCC--------CCChHHHHHHHHcCCCCeEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCc
Q 047180 177 GTK--------GLDFAALMDDIKNAPNGSFFLLHACAHNPTG-VDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPE 247 (337)
Q Consensus 177 ~~~--------~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG-~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~ 247 (337)
..+ ..+++.+++.+.+...+..+++.++.||||| .+++++++++|.++|++||+++|+||+|.+|....
T Consensus 204 ~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g-- 281 (449)
T 2cjg_A 204 GLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTG-- 281 (449)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTS--
T ss_pred hhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccC--
Confidence 001 1345568888864323444454344569999 59999999999999999999999999999885321
Q ss_pred cchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHH-HHHh-hhcccccCCChhHHHHHHHHhC
Q 047180 248 RDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKS-QLQQ-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 248 ~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~-~l~~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.......+ ....++ .||||.| |+||+++ ++++++.+.. .+.. ....++ +.+.++|.++..+|+
T Consensus 282 -~~~~~~~~-~~~~di---~t~sK~l-----~iG~~~~---~~~~~~~l~~~~~~~~~~~~t~-~~n~~~~~aa~aal~ 346 (449)
T 2cjg_A 282 -TAWAYQQL-DVAPDI---VAFGKKT-----QVCGVMA---GRRVDEVADNVFAVPSRLNSTW-GGNLTDMVRARRILE 346 (449)
T ss_dssp -SSSTHHHH-TCCCSE---EEECGGG-----SSEEEEE---CGGGGGSTTCTTTSTTSSCCSS-SSCHHHHHHHHHHHH
T ss_pred -cceeeccc-CCCceE---EEecCcc-----cEEEEEE---CHHHhhhhhhcccCCcccccCC-CCCHHHHHHHHHHHH
Confidence 11111111 222343 3789988 8999986 2343332110 0111 112233 457788988888886
No 203
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.68 E-value=3.6e-16 Score=149.18 Aligned_cols=141 Identities=13% Similarity=0.104 Sum_probs=91.9
Q ss_pred eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH---HHHHhcCc--eeeEeeeccCCCCCCChHHHHHHHHcCCCCeE
Q 047180 124 SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH---NIWRDAHV--TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSF 198 (337)
Q Consensus 124 t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~---~~~~~~G~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 198 (337)
+++|++++.+++..+.. |||+|++++|+|+.+. ..+...|. ..++++.. .++.+|++.+++.+.+. +.++
T Consensus 98 ~~sGs~a~~~a~~~~~~--~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~-~~~~ 172 (420)
T 3gbx_A 98 PHSGSQANFAVYTALLQ--PGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEH-KPKM 172 (420)
T ss_dssp CSSHHHHHHHHHHHHCC--TTCEEEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHH-CCSE
T ss_pred ecCcHHHHHHHHHHhcC--CCCEEEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhc-CCeE
Confidence 44458899888877765 9999999999998843 33334444 44555552 35779999999998752 2345
Q ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC-CCCCCCccchHHHHHhhhcCCeEEEEecccccccccc
Q 047180 199 FLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG-FASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYG 277 (337)
Q Consensus 199 ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G 277 (337)
+++ ++||||+ ..+ +++|+++|+++|++||+||+|.. +....... ..+ ....+++.||||.|+ |
T Consensus 173 v~~-~~~~~~~--~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~-----~~~---~~~di~~~s~sK~~~--g 236 (420)
T 3gbx_A 173 IIG-GFSAYSG--VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGVYP-----NPV---PHAHVVTTTTHKTLA--G 236 (420)
T ss_dssp EEE-CCTTCCS--CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTSSC-----CST---TTSSEEEEESSGGGC--S
T ss_pred EEE-ecCccCC--ccC---HHHHHHHHHHcCCEEEEECCcchhceecccCC-----ccc---ccCCEEEeecccCCC--C
Confidence 554 7799985 443 78999999999999999999742 22110000 001 113488899999996 6
Q ss_pred cccceeEe
Q 047180 278 QRVGCLSV 285 (337)
Q Consensus 278 ~RvG~~~~ 285 (337)
.|.||+++
T Consensus 237 ~~gg~~~~ 244 (420)
T 3gbx_A 237 PRGGLILA 244 (420)
T ss_dssp CSCEEEEE
T ss_pred CCceEEEE
Confidence 66799876
No 204
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.68 E-value=4.5e-16 Score=151.45 Aligned_cols=165 Identities=13% Similarity=0.009 Sum_probs=115.4
Q ss_pred EEeeccchh-HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeecc-CCCCCCChHHHHHHH-HcC-CCC
Q 047180 121 AVQSLSGTG-ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYH-PGTKGLDFAALMDDI-KNA-PNG 196 (337)
Q Consensus 121 ~~~t~g~~~-al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~-~~~~~~d~~~l~~~l-~~~-~~~ 196 (337)
++.|.|+++ ++.+++..+..+.+|+.|++++|.|+.+...++..|++++.+++.. .+++.+|++++++++ +.. +.+
T Consensus 152 ~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~ 231 (456)
T 2z67_A 152 AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVLDGDRVYVPVEDIENAIKKEIELGN 231 (456)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHHHTTC
T ss_pred EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEeccCCCCCcCHHHHHHHHHHHhhCCC
Confidence 578999995 4443444433222578899999999999999999999999888632 235789999999998 420 123
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
.++++.++||||||.+.+ +++|+++|+++|+++++|++|..+..+ . . ......+.. +.+ +++.|++|.++ +
T Consensus 232 ~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g-~-~-~~~~~~~~~-~~D-~~~~s~hK~~~-~ 302 (456)
T 2z67_A 232 RPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNY-Y-L-EKLKKAFKY-RVD-AVVSSSDKNLL-T 302 (456)
T ss_dssp CEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHH-H-H-HHHHHHHTS-CCS-EEEEEHHHHHC-C
T ss_pred eEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHH-h-h-HHHHHhhCC-CCC-EEEEcCCCCcC-C
Confidence 455555889999999955 677888899999999999999877531 0 0 000111111 333 45688999765 5
Q ss_pred ccccceeEeeeCCHHHHHHH
Q 047180 277 GQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~ 296 (337)
++++||+++ ++++.++++
T Consensus 303 p~g~G~l~~--~~~~~~~~l 320 (456)
T 2z67_A 303 PIGGGLVYS--TDAEFIKEI 320 (456)
T ss_dssp CSSCEEEEE--SCHHHHHHH
T ss_pred CCCeEEEEE--cCHHHHhhc
Confidence 799999986 566655544
No 205
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.68 E-value=2e-16 Score=155.20 Aligned_cols=206 Identities=12% Similarity=0.041 Sum_probs=129.7
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHHh-cCcCCCCCC------CCCCCHHHHHHHHHHHhCCCCcccccCc--eeE
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERRI-AGTANMEYL------PMGGSVKMVEETLKLAYGDNSEFIKDKR--IAA 121 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~~-~~~~~~~Y~------~~~G~~~lr~aia~~~~~~~~~~~~~~~--i~~ 121 (337)
.+.|+|..|. .++++.+.+|+... ......+|+ ...+..++.+.+.+++....+.. ++. ..+
T Consensus 44 ~~~i~L~a~e-------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~--~~~~~~~V 114 (483)
T 1rv3_A 44 RVGLELIASE-------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLD--PQCWGVNV 114 (483)
T ss_dssp HSSEECCTTC-------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCC--TTTEEEEC
T ss_pred hcCeEEEcCC-------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCC--cccCceEE
Confidence 3578887653 23677888877653 222222332 22234567766666653332221 221 223
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH--------HHHhcC--ceeeEeeeccCCCCCCChHHHHHHHH
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN--------IWRDAH--VTQRTFHYYHPGTKGLDFAALMDDIK 191 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~--------~~~~~G--~~~~~~~~~~~~~~~~d~~~l~~~l~ 191 (337)
+.+.|+ +++..++..+.+ |||+|++++|.|+.+.. .++..| .+++++++ +++++.+|++++++.+.
T Consensus 115 ~~~sGs-~an~~~~~all~--pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~-~~~~~~iD~d~le~~i~ 190 (483)
T 1rv3_A 115 QPYSGS-PANFAVYTALVE--PHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKV-NPDTGYIDYDRLEENAR 190 (483)
T ss_dssp CCSSHH-HHHHHHHHHHTC--TTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECB-CTTTCSBCHHHHHHHHH
T ss_pred EECCcH-HHHHHHHHHhcC--CCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcc-ccCCCcCCHHHHHHHHh
Confidence 455555 777776666655 99999999999888753 234455 34444444 33468899999999987
Q ss_pred cCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEeccc
Q 047180 192 NAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQSYA 270 (337)
Q Consensus 192 ~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~S 270 (337)
+. +.++|++ +++||| .+++ +++|+++|+++|++||+|++|. ++...+... .+ +. + .-+++.|++
T Consensus 191 ~~-~tklIi~--~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~--~p---~~--~-~div~~s~~ 255 (483)
T 1rv3_A 191 LF-HPKLIIA--GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVP--SP---FE--H-CHVVTTTTH 255 (483)
T ss_dssp HH-CCSEEEE--CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSC--CG---GG--T-CSEEEEESS
T ss_pred hc-CCcEEEE--eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCC--CC---CC--C-CcEEEecCc
Confidence 32 2345554 678999 7776 7789999999999999999975 333211110 11 11 1 236789999
Q ss_pred ccccccccccceeEee
Q 047180 271 KNMGLYGQRVGCLSVL 286 (337)
Q Consensus 271 K~~~~~G~RvG~~~~~ 286 (337)
|+| +|+|.||+++.
T Consensus 256 K~l--~GprgG~i~~~ 269 (483)
T 1rv3_A 256 KTL--RGCRAGMIFYR 269 (483)
T ss_dssp GGG--CCCSCEEEEEE
T ss_pred ccC--CCCCceEEEEc
Confidence 987 59999999874
No 206
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.67 E-value=4.2e-16 Score=152.65 Aligned_cols=209 Identities=10% Similarity=-0.046 Sum_probs=141.5
Q ss_pred chHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc-----CceeEEeeccchhHHHHHHHHHhhh-CC-
Q 047180 71 LECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD-----KRIAAVQSLSGTGACRLFADFQKRF-HP- 143 (337)
Q Consensus 71 ~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-----~~i~~~~t~g~~~al~~~~~~l~~~-~p- 143 (337)
+..+.+++..........|....+..++.+.+++|+.+..+...+. ..-.+++|.||++|+.+++..+... .+
T Consensus 87 ~~~~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~ 166 (486)
T 1js3_A 87 PAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRR 166 (486)
T ss_dssp HHHHHHHHHHHHCCCCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcCccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhh
Confidence 3445666655422234567666667889989988874332211100 0113578999999988877554321 01
Q ss_pred -----CC--------e--EEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCC
Q 047180 144 -----DS--------Q--IYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACA 205 (337)
Q Consensus 144 -----gd--------~--Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p 205 (337)
|| . |+++.|+|+.+...++..|++++.+|+ + .++.+|+++|++++.+.. ...++++.++|
T Consensus 167 ~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~-d-~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~ 244 (486)
T 1js3_A 167 LQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPS-D-GKFAMRASALQEALERDKAAGLIPFFVVATLG 244 (486)
T ss_dssp HHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECC-C-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeec-C-CCCCCCHHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 42 3 888999999999999999999999997 3 368899999999986421 11245666889
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH-HHhhhcCCeEEEEecccccccccccccceeE
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI-RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
+||||.+ +++++|+++|+++|+++++|++|..+... . .+.... ..+ . +...+ +.|++|.++.| +++|+++
T Consensus 245 ~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~-~-~~~~~~~~g~-~-~adsi-~~~~hK~~~~p-~~~G~l~ 315 (486)
T 1js3_A 245 TTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFI-C-PEFRHLLNGV-E-FADSF-NFNPHKWLLVN-FDCSAMW 315 (486)
T ss_dssp CTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGG-S-TTTGGGGTTG-G-GCSEE-EECHHHHSSCC-SSCEEEE
T ss_pred CCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHH-C-HHHHHHhcCc-c-ccCee-EEchhhhcCCC-cceEEEE
Confidence 9999987 56888999999999999999999875421 0 011111 111 1 12344 46789999976 8999998
Q ss_pred eeeCCHHH
Q 047180 285 VLCEDEKQ 292 (337)
Q Consensus 285 ~~~~~~~~ 292 (337)
+ +++..
T Consensus 316 ~--~~~~~ 321 (486)
T 1js3_A 316 V--KRRTD 321 (486)
T ss_dssp E--SCHHH
T ss_pred E--eCHHH
Confidence 7 56653
No 207
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.66 E-value=8.7e-16 Score=149.41 Aligned_cols=168 Identities=14% Similarity=0.068 Sum_probs=118.6
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCC---CeEEEcCCCCcchH----HHHHhcCce
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPD---SQIYIPVPTWSNHH----NIWRDAHVT 167 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pg---d~Vlv~~P~y~~y~----~~~~~~G~~ 167 (337)
..++++.+++++ +. ++++ +++|.|+++++.+++..+.+ || |+|+++.|+|+.+. ..++..|++
T Consensus 113 ~~~l~~~la~~~-g~-----~~~~--v~~t~g~t~al~~~~~~~~~--~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~ 182 (465)
T 3e9k_A 113 DESIVGLMKDIV-GA-----NEKE--IALMNALTVNLHLLMLSFFK--PTPKRYKILLEAKAFPSDHYAIESQLQLHGLN 182 (465)
T ss_dssp THHHHGGGHHHH-TC-----CGGG--EEECSCHHHHHHHHHHHHCC--CCSSSCEEEEETTCCHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHc-CC-----CcCC--EEEECCHHHHHHHHHHHhcc--ccCCCCEEEEcCCcCCchHHHHHHHHHHcCCc
Confidence 356888888875 32 1344 57899999999999887755 44 55999999999844 366778988
Q ss_pred eeE--eeec-cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCC
Q 047180 168 QRT--FHYY-HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASG 244 (337)
Q Consensus 168 ~~~--~~~~-~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~ 244 (337)
++. +++. .++++.+|++++++.+.++.++..++++++||||||.+++ +++|.++|+++|++||+|+++..-...
T Consensus 183 ~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~~~ 259 (465)
T 3e9k_A 183 IEESMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGNVE 259 (465)
T ss_dssp HHHHEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTSC
T ss_pred ceeeeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCCcC
Confidence 632 1111 1235778999999999643124556667999999999998 577889999999999999998643211
Q ss_pred CCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 245 DPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
. + + ...+ .-+++.|++|.++....++|++++
T Consensus 260 -~--~---~---~~~~-~D~~~~s~~K~l~~gp~~~g~l~~ 290 (465)
T 3e9k_A 260 -L--Y---L---HDWG-VDFACWCSYKYLNAGAGGIAGAFI 290 (465)
T ss_dssp -C--C---H---HHHT-CCEEEECSSSTTCCCTTCCCEEEE
T ss_pred -C--c---h---hhcC-CCEEEECcccccccCCCceEEEEE
Confidence 1 1 1 1112 236778999999433337999886
No 208
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.65 E-value=9.4e-16 Score=145.69 Aligned_cols=195 Identities=15% Similarity=0.081 Sum_probs=121.4
Q ss_pred chHHHHHHHHh-cCcCCCCCCC---CCCC---HHHH----HHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh
Q 047180 71 LECVREAERRI-AGTANMEYLP---MGGS---VKMV----EETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK 139 (337)
Q Consensus 71 ~~~v~~a~~~~-~~~~~~~Y~~---~~G~---~~lr----~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~ 139 (337)
++.+.+|+.+. ......+|+. ..|. .++. +.+++++ +.. ++ .+++++|++++.+++..+.
T Consensus 36 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~-g~~-----~~---~i~~~sGt~a~~~a~~~~~ 106 (405)
T 2vi8_A 36 SRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF-GAE-----HA---NVQPHSGAQANMAVYFTVL 106 (405)
T ss_dssp CHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH-TCS-----EE---ECCCSSHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh-CCC-----ce---EEEecCcHHHHHHHHHHhc
Confidence 67788877553 2121223322 1232 3344 5777765 321 11 2333444999999988775
Q ss_pred hhCCCCeEEEcCCCCcchHH-H--HHhcCc--eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCC
Q 047180 140 RFHPDSQIYIPVPTWSNHHN-I--WRDAHV--TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPS 214 (337)
Q Consensus 140 ~~~pgd~Vlv~~P~y~~y~~-~--~~~~G~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s 214 (337)
. +||+|++++|+|+.+.. . +...|. +++.+++ ++.++.+|++.+++.+.+. +.+++++ +|+|+ |...
T Consensus 107 ~--~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~d~~~l~~~i~~~-~~~~v~~--~~~~~-~~~~- 178 (405)
T 2vi8_A 107 E--HGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGV-DPETHVIDYDDVREKARLH-RPKLIVA--AAAAY-PRII- 178 (405)
T ss_dssp C--TTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECB-CTTTCSBCHHHHHHHHHHH-CCSEEEE--CCSSC-CSCC-
T ss_pred C--CCCEEEEecccccchhcccchhhhccceeEEEeccc-ccccCCcCHHHHHHHHHhc-CCeEEEE--eCCCC-CccC-
Confidence 5 89999999999998853 1 224444 7777776 3235789999999988742 2345554 45665 3433
Q ss_pred HHHHHHHHHHHHhcCceeEEcccCCCCCC-CCCccchHHHHHhhhcCCeEEEEeccccccc-ccccccceeEeeeCCHHH
Q 047180 215 EEQWKEISYQIKAKGHFPFFDMAYQGFAS-GDPERDAKAIRIFLKDGHLLGLAQSYAKNMG-LYGQRVGCLSVLCEDEKQ 292 (337)
Q Consensus 215 ~~~~~~l~~~~~~~~~~ii~De~Y~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~-~~G~RvG~~~~~~~~~~~ 292 (337)
++++|+++|+++|+++|+||+|..... .+.. . ..+ . ..+ +++.||||.|+ ++| ||+++ ++++
T Consensus 179 --~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~--~---~~~-~-~~d-i~~~s~sK~~~g~~g---G~~~~---~~~~ 242 (405)
T 2vi8_A 179 --DFAKFREIADEVGAYLMVDMAHIAGLVAAGLH--P---NPV-P-YAH-FVTTTTHKTLRGPRG---GMILC---QEQF 242 (405)
T ss_dssp --CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSS--C---CST-T-TCS-EEEEESSSTTCCCSC---EEEEE---CHHH
T ss_pred --CHHHHHHHHHHcCCEEEEEccccccccccCcC--C---Ccc-c-cCC-EEEEeccccCCCCCC---eEEEE---cHHH
Confidence 378999999999999999999983211 1110 0 001 1 122 78899999997 777 99986 4666
Q ss_pred HHHHHH
Q 047180 293 AVAVKS 298 (337)
Q Consensus 293 ~~~~~~ 298 (337)
++.+..
T Consensus 243 ~~~l~~ 248 (405)
T 2vi8_A 243 AKQIDK 248 (405)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 555543
No 209
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.64 E-value=2.7e-15 Score=142.36 Aligned_cols=151 Identities=16% Similarity=0.131 Sum_probs=112.4
Q ss_pred cccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHh-----hhC
Q 047180 68 PVVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQK-----RFH 142 (337)
Q Consensus 68 ~~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~-----~~~ 142 (337)
+..++.+.+++.+.... ..|.+..+..++++++++++ +.. ..+.+.+|++++.+++..+. ...
T Consensus 11 ~~~~~~~~~a~~~~~~~--~~~~~~~~~~~l~~~la~~~-~~~---------~~i~~~sGt~a~~~al~~~~~~~~~~~~ 78 (390)
T 3b8x_A 11 STWDDLEYKAIQSVLDS--KMFTMGEYVKQYETQFAKTF-GSK---------YAVMVSSGSTANLLMIAALFFTKKPRLK 78 (390)
T ss_dssp CCCCHHHHHHHHHHHHH--TCCSSCHHHHHHHHHHHHHH-TCS---------EEEEESCHHHHHHHHHHHTTSSSSCSCC
T ss_pred CCCCHHHHHHHHHHHHc--CCCCCChHHHHHHHHHHHHH-CCC---------cEEEECCHHHHHHHHHHHHHhhhhcCCC
Confidence 44566676666553111 23556678899999999997 321 13577788889999887761 123
Q ss_pred CCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHH
Q 047180 143 PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEIS 222 (337)
Q Consensus 143 pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~ 222 (337)
+||+|+++.|+|+.+...++..|++++.+++ +++++.+|++++++.+++ +.+++++.+.++|| ..+++|+
T Consensus 79 ~g~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~~~~d~~~l~~~i~~--~~~~v~~~~~~g~~-------~~~~~i~ 148 (390)
T 3b8x_A 79 KGDEIIVPAVSWSTTYYPLQQYGLRVKFVDI-DINTLNIDIESLKEAVTD--STKAILTVNLLGNP-------NNFDEIN 148 (390)
T ss_dssp TTCEEEEESSSCHHHHHHHHHTTCEEEEECB-CTTTCSBCHHHHHHHCCT--TEEEEEEECGGGCC-------CCHHHHH
T ss_pred CcCEEEECCCCcHHHHHHHHHcCCEEEEEec-CccccCcCHHHHHHHhCc--CCeEEEEECCccCh-------hhHHHHH
Confidence 8999999999999999999999999999987 333588999999998853 33444443334554 4688899
Q ss_pred HHHHhcCceeEEcccCCC
Q 047180 223 YQIKAKGHFPFFDMAYQG 240 (337)
Q Consensus 223 ~~~~~~~~~ii~De~Y~~ 240 (337)
++|+++++++|+|++|..
T Consensus 149 ~l~~~~~~~li~D~a~~~ 166 (390)
T 3b8x_A 149 KIIGGRDIILLEDNCESM 166 (390)
T ss_dssp HHHTTSCCEEEEECTTCT
T ss_pred HHHHHcCCEEEEECcCcc
Confidence 999999999999999984
No 210
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.64 E-value=8.9e-16 Score=149.04 Aligned_cols=168 Identities=11% Similarity=-0.012 Sum_probs=115.0
Q ss_pred CCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCcee
Q 047180 89 YLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQ 168 (337)
Q Consensus 89 Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~ 168 (337)
|.+.....++++.+++ + +. + + .++.|+|+++++.+++.++.. +||+|+++.|+|+.+...+...|+++
T Consensus 53 ~~~~~~~~~~~~~la~-~-g~-----~-~--~v~~~~G~t~a~~~~~~a~~~--~gd~Vlv~~~~h~s~~~~~~~~G~~~ 120 (446)
T 2x3l_A 53 HHPEEVILKSMKQVEK-H-SD-----Y-D--GYFLVNGTTSGILSVIQSFSQ--KKGDILMARNVHKSVLHALDISQQEG 120 (446)
T ss_dssp TSCSSHHHHHHHHHCS-C-TT-----E-E--EEEESSHHHHHHHHHHHTTTT--SSSCEEECTTCCHHHHHHHHHHTCCE
T ss_pred cCcchHHHHHHHHHHh-c-CC-----C-c--eEEEeCCHHHHHHHHHHHhcC--CCCEEEEecCccHHHHHHHHHcCCeE
Confidence 3444455677777777 3 32 1 2 257899999999999887765 99999999999999999999999999
Q ss_pred eEeeeccCCC----CCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCC-CCC
Q 047180 169 RTFHYYHPGT----KGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQG-FAS 243 (337)
Q Consensus 169 ~~~~~~~~~~----~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~-~~~ 243 (337)
+.++....++ +.+|++.+ .. ++.+++++ ++ +||||.+++ +++|+++|+++|+++|+||+|.. +.+
T Consensus 121 ~~v~~~~~~~~~~~~~~d~~~l---~~--~~~~~v~~-~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f 190 (446)
T 2x3l_A 121 HFIETHQSPLTNHYNKVNLSRL---NN--DGHKLVVL-TY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGL 190 (446)
T ss_dssp EECEEEECTTTSSEEEEEC------------CCEEEE-ES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTS
T ss_pred EEEeCeeccccCcCCCCCHHHH---cC--CCceEEEE-EC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhcc
Confidence 9888722223 45677776 22 23345555 55 566999998 67899999999999999999986 222
Q ss_pred CCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEee
Q 047180 244 GDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~ 286 (337)
. .. +.. ....+. -+++.|+||.++ ++.++||+++.
T Consensus 191 ~---~~--~~~-~~~~g~-Di~~~S~~K~l~-~~~g~g~l~~~ 225 (446)
T 2x3l_A 191 Q---GF--PDS-TLNYQA-DYVVQSFHKTLP-ALTMGSVLYIH 225 (446)
T ss_dssp T---TS--CCC-GGGGTC-SEEEECHHHHSS-SCTTCEEEEEE
T ss_pred C---CC--CCC-hHHcCC-CEEEECCccccc-cccccEEEEEc
Confidence 2 11 111 111222 288899999543 23458999874
No 211
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.64 E-value=2.2e-15 Score=155.01 Aligned_cols=154 Identities=13% Similarity=0.043 Sum_probs=111.1
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCC----C-----ChHHHHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKG----L-----DFAALMDDIK 191 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~----~-----d~~~l~~~l~ 191 (337)
++.++|+++++..++..+.. |||+|+++.|+|..+...++..|++++.++... ++++ + |++.++++++
T Consensus 224 i~~~~Gtt~a~~~~i~al~~--~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~-~~~g~~g~i~~~~~d~e~le~~i~ 300 (755)
T 2vyc_A 224 WSVVVGTSGSNRTIMQACMT--DNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSR-NRYGIIGPIYPQEMQPETLQKKIS 300 (755)
T ss_dssp EEESSHHHHHHHHHHHHHCC--TTCEEEEESSCCHHHHHHHHHHCCEEEEECCCB-CTTSCBCCCCGGGGSHHHHHHHHH
T ss_pred EEECCcHHHHHHHHHHHhcC--CCCEEEECCCchHHHHHHHHHcCCEEEEEeCCC-CccccccccCcCCCCHHHHHHHHH
Confidence 46788888999998887766 999999999999999888999999999888632 2333 4 9999999987
Q ss_pred cCCCCe--------EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHHHh--hh-c
Q 047180 192 NAPNGS--------FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIRIF--LK-D 259 (337)
Q Consensus 192 ~~~~~~--------~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~~~--~~-~ 259 (337)
+.+..+ ++++ ++| ||||.+.+ +++|+++|+++++++++||+|.... ++..-.+..++ .. .+ .
T Consensus 301 ~~~~~k~~~~~~~klvil-~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~~~~~~~~~~~~~-~g~~aD~~ 374 (755)
T 2vyc_A 301 ESPLTKDKAGQKPSYCVV-TNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYARFNPIYADHYAM-RGEPGDHN 374 (755)
T ss_dssp HCTTTGGGTTCCCSCEEE-ESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTGGGCGGGTTSSSS-CSCCCCCS
T ss_pred hCccccccccCCCeEEEE-ECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhcccCcccCCcchh-cCCcCCcc
Confidence 532222 4554 678 79999976 6788999999999999999997532 21000000011 11 11 1
Q ss_pred CCeEEEEecccccccccccccceeEe
Q 047180 260 GHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 260 ~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
..+++++.|++|++ +|++.|.++.
T Consensus 375 ~~~~iv~~S~hK~L--~g~~~g~~i~ 398 (755)
T 2vyc_A 375 GPTVFATHSTHKLL--NALSQASYIH 398 (755)
T ss_dssp SBEEEEEEETTTSS--SCCTTCEEEE
T ss_pred CCCeEEEECccccc--cCcCCeeeee
Confidence 34778999999985 5888555443
No 212
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.63 E-value=1.5e-15 Score=149.96 Aligned_cols=208 Identities=14% Similarity=0.000 Sum_probs=144.0
Q ss_pred HHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-----------
Q 047180 73 CVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF----------- 141 (337)
Q Consensus 73 ~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~----------- 141 (337)
.+.+++..........|....+..++.+++++|+.+..+...+.+ .++.|.||++|+..++.++...
T Consensus 111 ~~~e~l~~~~~~~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~--~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~ 188 (511)
T 3vp6_A 111 LAGEWLTSTANTNMFTYEIAPVFVLMEQITLKKMREIVGWSSKDG--DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA 188 (511)
T ss_dssp HHHHHHHHHHCCCSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSC--EEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred HHHHHHHHHhccCCCCcccCchHHHHHHHHHHHHHHHhCCCCCCC--ceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence 345555543223356788777888999999999754322211122 3678999999988777655431
Q ss_pred -CCCCeEEEcCCCCcchHHHHHhcCc---eeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCCCCCCCCCCC
Q 047180 142 -HPDSQIYIPVPTWSNHHNIWRDAHV---TQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACAHNPTGVDPS 214 (337)
Q Consensus 142 -~pgd~Vlv~~P~y~~y~~~~~~~G~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p~NPTG~~~s 214 (337)
.|++.|+++.++|+.+...++..|. +++.+|. +. ++.+|+++|++++.+.. ..+++++.++|+||||.+
T Consensus 189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~-d~-~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v-- 264 (511)
T 3vp6_A 189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKC-NE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF-- 264 (511)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB-CT-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB--
T ss_pred cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeec-CC-CCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc--
Confidence 1567999999999999999999998 8888887 33 58899999999987421 114566668999999998
Q ss_pred HHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhc-CCeEEEEecccccccccccccceeEeeeCCHHHH
Q 047180 215 EEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKD-GHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQA 293 (337)
Q Consensus 215 ~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~ 293 (337)
+++++|+++|+++|+++++|++|...... ..... . .+... +-. +++.+++|.++.| ...|++++ ++++.+
T Consensus 265 -d~l~~I~~ia~~~~~~lhvD~a~~~~~~~--~~~~~-~-~~~g~~~aD-sv~~~~hK~l~~p-~g~g~l~~--~~~~~~ 335 (511)
T 3vp6_A 265 -DPIQEIADICEKYNLWLHVDAAWGGGLLM--SRKHR-H-KLNGIERAN-SVTWNPHKMMGVL-LQCSAILV--KEKGIL 335 (511)
T ss_dssp -CCHHHHHHHHHHHTCEEEEEETTGGGGGG--CTTTG-G-GGTTGGGCS-EEEECTTSTTCCC-SCCEEEEE--SSTTHH
T ss_pred -ccHHHHHHHHHHcCCEEEEEccchhhHhh--Chhhh-h-hccCCccCC-EEEECcccccCCC-cCeEEEEE--eCHHHH
Confidence 56889999999999999999999875421 00000 0 01111 112 3446899999865 67888876 566544
Q ss_pred HH
Q 047180 294 VA 295 (337)
Q Consensus 294 ~~ 295 (337)
..
T Consensus 336 ~~ 337 (511)
T 3vp6_A 336 QG 337 (511)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 213
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.62 E-value=4.7e-15 Score=145.91 Aligned_cols=193 Identities=13% Similarity=0.007 Sum_probs=132.7
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh------CCC-----C-eEEEcCCCC
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF------HPD-----S-QIYIPVPTW 154 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~------~pg-----d-~Vlv~~P~y 154 (337)
..|....+..++.+.+.+|+.+..+...+.+ .+++|.||++|+.+++..+... .+| + +|+++.+.|
T Consensus 122 ~~~~~~~~~~~le~~~~~~la~~~g~~~~~~--~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h 199 (504)
T 2okj_A 122 FTYEIAPVFVLMEQITLKKMREIVGWSSKDG--DGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 199 (504)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSC--EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSC
T ss_pred CchhhChHHHHHHHHHHHHHHHHhCCCCCCC--CEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcch
Confidence 4566555556677777666533211111122 3678999999999888766421 145 6 899999999
Q ss_pred cchHHHHHhcCc---eeeEeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 047180 155 SNHHNIWRDAHV---TQRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK 228 (337)
Q Consensus 155 ~~y~~~~~~~G~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~ 228 (337)
+.+...++..|. +++.+|+ ++ ++.+|++.|++.+.+. ..++.+|+.++|+||||.+.+ +++|+++|+++
T Consensus 200 ~s~~~~~~~~g~g~~~v~~v~~-~~-~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~ 274 (504)
T 2okj_A 200 YSIKKAGAALGFGTDNVILIKC-NE-RGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKY 274 (504)
T ss_dssp THHHHHHHHTTSCGGGEEEECB-CT-TSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCcccEEEEec-CC-CCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHc
Confidence 999999998876 8899987 33 5889999999988641 113455666899999999864 77889999999
Q ss_pred CceeEEcccCCCCCCCCCccchHHHHHhhh-cCCeEEEEecccccccccccccceeEeeeCCHHHHH
Q 047180 229 GHFPFFDMAYQGFASGDPERDAKAIRIFLK-DGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAV 294 (337)
Q Consensus 229 ~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~ 294 (337)
|+++++|++|.++.... .... ..+.. .+.+ +++.|++|.++.| .++|++++ .+++.++
T Consensus 275 g~~lhvD~a~~~~~~~~--~~~~--~~~~g~~~~D-~i~~~~hK~~~~p-~~~g~l~~--~~~~~~~ 333 (504)
T 2okj_A 275 NLWLHVDAAWGGGLLMS--RKHR--HKLNGIERAN-SVTWNPHKMMGVL-LQCSAILV--KEKGILQ 333 (504)
T ss_dssp TCEEEEEETTGGGGGGC--TTTG--GGGTTGGGCS-EEEECTTSTTCCC-SCCEEEEE--SSTTHHH
T ss_pred CCEEEEehhhhhHHHhC--HhhH--hhcCCcccCC-EEEECchhhcCCC-cceEEEEE--ECHHHHH
Confidence 99999999998875310 0000 01111 1223 5567899999965 78999987 4544433
No 214
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.62 E-value=6.9e-15 Score=144.88 Aligned_cols=202 Identities=11% Similarity=-0.017 Sum_probs=133.2
Q ss_pred ccchHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc-CceeEEeeccchhHHHHHHHHHhhh-C----
Q 047180 69 VVLECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD-KRIAAVQSLSGTGACRLFADFQKRF-H---- 142 (337)
Q Consensus 69 ~~~~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~-~~i~~~~t~g~~~al~~~~~~l~~~-~---- 142 (337)
++++.+.+++..........|....+..++.+.+.+++.+..+...++ +.+..+.|.||++++.+++.++..- .
T Consensus 67 ~~~~~v~~~l~~~~~~~~~~~~~~p~~~~le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~ 146 (502)
T 3hbx_A 67 WMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRK 146 (502)
T ss_dssp CCCHHHHHHHHHTTTCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhccCCCChhcChhHHHHHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHH
Confidence 456677777665412122233333345566666666653322211112 2223456899999998887666541 0
Q ss_pred -CCC-----eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHH
Q 047180 143 -PDS-----QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEE 216 (337)
Q Consensus 143 -pgd-----~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~ 216 (337)
+|| +|+++.++|+.|...++..|++++.+|+ +++++.+|++.+++++.+ ++.+|+.++|+||||.+.+
T Consensus 147 ~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~-~~~~~~~d~~~l~~~i~~---~t~~v~~~~~~n~tG~~~~-- 220 (502)
T 3hbx_A 147 AEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKL-SEGYYVMDPQQAVDMVDE---NTICVAAILGSTLNGEFED-- 220 (502)
T ss_dssp HTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECC-BTTBCSCCHHHHHHHCCT---TEEEEEEEBSCTTTCCBCC--
T ss_pred hcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEec-CCCcCcCCHHHHHHHHhh---CCEEEEEecCCCCCCcccC--
Confidence 266 9999999999999999999999999997 333488999999998863 3455555889999999976
Q ss_pred HHHHHHHHHHhc------CceeEEcccCCCCC----CCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 217 QWKEISYQIKAK------GHFPFFDMAYQGFA----SGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 217 ~~~~l~~~~~~~------~~~ii~De~Y~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+++|+++|+++ ++++++|++|.++. .+.... .+. ...--++..|..|.++ ++.++|++++
T Consensus 221 -l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~------~~~-~~~~D~v~~s~hK~l~-~p~g~G~~~~ 290 (502)
T 3hbx_A 221 -VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEW------DFR-LPLVKSINVSGHKYGL-VYAGIGWVIW 290 (502)
T ss_dssp -HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCC------STT-STTEEEEEEETTTTTC-CCSSCEEEEE
T ss_pred -HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCccccc------ccC-CCCceEEEECcccccC-CCCCeEEEEE
Confidence 55677788888 99999999998764 111100 011 1112234457788664 6788999876
No 215
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.61 E-value=3.3e-15 Score=152.77 Aligned_cols=168 Identities=11% Similarity=0.016 Sum_probs=120.0
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHH-HHhcCceeeEeee
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNI-WRDAHVTQRTFHY 173 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~-~~~~G~~~~~~~~ 173 (337)
..++++.+|+++ +.. . .++.++|+++++..++..+.. |||+|+++.|+|..+... ++..|++++.++.
T Consensus 175 i~e~e~~lA~~~-gae-------~-~i~v~nGtt~an~~ai~al~~--pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~ 243 (730)
T 1c4k_A 175 AVAAEKHAARVY-NAD-------K-TYFVLGGSSNANNTVTSALVS--NGDLVLFDRNNHKSVYNSALAMAGGRPVYLQT 243 (730)
T ss_dssp HHHHHHHHHHHT-TCS-------E-EEEESSHHHHHHHHHHHHHCC--TTCEEEEETTCCHHHHHHHTTTTCCEEEEECE
T ss_pred HHHHHHHHHHHH-CCC-------c-EEEECCHHHHHHHHHHHHhcC--CCCEEEEcCCchHHHHHHHHHHCCCEEEEEeC
Confidence 567888888875 421 1 256788888999988887766 999999999999988877 8889999988876
Q ss_pred ccCCCCC----CChHHH-----HHHHHcC-CC---C----eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 174 YHPGTKG----LDFAAL-----MDDIKNA-PN---G----SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 174 ~~~~~~~----~d~~~l-----~~~l~~~-~~---~----~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
.. ++++ +|++.+ ++++.+. +. . +++++ ++| ||||.+.+ +++|+++|+++++++++||
T Consensus 244 ~~-~~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv-~~p-n~~G~v~d---l~~I~~la~~~g~~livDe 317 (730)
T 1c4k_A 244 NR-NPYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVI-QLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDS 317 (730)
T ss_dssp EE-CTTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEE-ESB-CTTSEEEC---HHHHHHHHGGGBSEEEEEC
T ss_pred Cc-cccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEE-ECC-CCCCeecC---HHHHHHHHHHcCCeEEEEc
Confidence 32 2344 688888 8887643 10 1 44555 678 69999975 6789999999999999999
Q ss_pred cCCCC-CCCCCccchHHHHHhh-----hcCCeEEEEecccccccccccccceeE
Q 047180 237 AYQGF-ASGDPERDAKAIRIFL-----KDGHLLGLAQSYAKNMGLYGQRVGCLS 284 (337)
Q Consensus 237 ~Y~~~-~~~~~~~~~~~~~~~~-----~~~~~~i~~~S~SK~~~~~G~RvG~~~ 284 (337)
+|... .++. .......+. ....+++++.|+||++ +|++.|.++
T Consensus 318 Ah~~~~~f~~---~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I 366 (730)
T 1c4k_A 318 AWVGYEQFIP---MMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQI 366 (730)
T ss_dssp TTCCGGGSSG---GGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEE
T ss_pred ccccccccCc---ccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEE
Confidence 99753 2221 000001111 1124679999999985 588877655
No 216
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.60 E-value=3.5e-15 Score=146.61 Aligned_cols=206 Identities=11% Similarity=0.057 Sum_probs=136.2
Q ss_pred cccchHHHHHH-HHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-----
Q 047180 68 PVVLECVREAE-RRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF----- 141 (337)
Q Consensus 68 ~~~~~~v~~a~-~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~----- 141 (337)
+..++.+.+++ ........+.|..+.+..++.+.+.+|+.+..+.. ..+ .+++|.||++|+.+++.+....
T Consensus 110 ~~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~--~~~~t~ggt~a~~~al~~ar~~~~~~~ 186 (497)
T 2qma_A 110 PPLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKA--DGIFTSGGTQSNQMGLMLARDWIADKL 186 (497)
T ss_dssp CCBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTC--EEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCC--CeEEcCCchHHHHHHHHHHHHHHHHhh
Confidence 44555565544 33322233456554456667777666653322211 112 3678999999998887653110
Q ss_pred ------CC------CC-eEEEcCCCCcchHHHHHhcCc---eeeEeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEe
Q 047180 142 ------HP------DS-QIYIPVPTWSNHHNIWRDAHV---TQRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLH 202 (337)
Q Consensus 142 ------~p------gd-~Vlv~~P~y~~y~~~~~~~G~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~ 202 (337)
.+ || .|+++.+.++.+...++..|. +++.+|+ ++ ++.+|+++|++.+.+. ..+.++++.
T Consensus 187 ~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~-~~-~~~~d~~~L~~~i~~~~~~~~~~~~vv~ 264 (497)
T 2qma_A 187 SGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDA-NA-DGTMDITKLDEVIAQAKAEGLIPFAIVG 264 (497)
T ss_dssp HCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECB-CT-TSSBCGGGHHHHHHHHHHTTCEEEEEEE
T ss_pred cccchhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEec-CC-CCcCCHHHHHHHHHHHHHCCCcceEEEE
Confidence 02 46 899999999999998888876 7888987 33 5889999999988742 112335555
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHH-hhhc-CCeEEEEeccccccccccccc
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRI-FLKD-GHLLGLAQSYAKNMGLYGQRV 280 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~-~~~~-~~~~i~~~S~SK~~~~~G~Rv 280 (337)
+.|+||||.+- .+++|+++|+++|+++++|++|.++... .+ .+. +... ... +++.|++|.++.| +++
T Consensus 265 ~~~~~~tG~~~---~l~~I~~l~~~~~~~l~vD~a~~~~~~~---~~---~~~~~~gi~~~D-~i~~s~hK~l~~p-~~~ 333 (497)
T 2qma_A 265 TAGTTDHGAID---DLDFIADMAVKHDMWMHVDGAYGGALIL---SS---HKSRLKGVERAH-SISVDFHKLFYQT-ISC 333 (497)
T ss_dssp EBSCTTTCCBC---CHHHHHHHHHHHTCEEEEEETTGGGGGG---ST---TGGGGTTGGGCS-EEEEETTTTTCCC-SSC
T ss_pred cCCCCCCCCCC---CHHHHHHHHHHcCCEEEEehhhhHHHHh---Cc---chHhhcCcccCC-EEEEcchhccCCC-cce
Confidence 88999999965 4778899999999999999999887531 11 111 1111 123 5567899999865 799
Q ss_pred ceeEeeeCCHH
Q 047180 281 GCLSVLCEDEK 291 (337)
Q Consensus 281 G~~~~~~~~~~ 291 (337)
|++++ +++.
T Consensus 334 G~l~~--~~~~ 342 (497)
T 2qma_A 334 GALLV--NDKS 342 (497)
T ss_dssp EEEEE--SCGG
T ss_pred EEEEE--eCHH
Confidence 99987 4554
No 217
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.56 E-value=4.4e-14 Score=139.41 Aligned_cols=188 Identities=12% Similarity=0.008 Sum_probs=128.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhh-----C-CCC------eEEEcCCCC
Q 047180 87 MEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRF-----H-PDS------QIYIPVPTW 154 (337)
Q Consensus 87 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~-----~-pgd------~Vlv~~P~y 154 (337)
..|..+.+..++.+.+.+|+.+..+ .+.+ .+++|.||++|+.+++.++... . +|| +|+++.+.|
T Consensus 138 ~~~~~s~~~~~le~~~~~~la~l~g--~~~~--~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h 213 (515)
T 2jis_A 138 YTYEIAPVFVLMEEEVLRKLRALVG--WSSG--DGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECH 213 (515)
T ss_dssp TCTTTCHHHHHHHHHHHHHHHHHHT--CSSC--EEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSC
T ss_pred CchhhchHHHHHHHHHHHHHHHHhC--CCCC--CeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCcc
Confidence 4566555655555555554422111 1122 3578999999988777665310 1 465 899999999
Q ss_pred cchHHHHHhcCc---eeeEeeeccCCCCCCChHHHHHHHHcC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhc
Q 047180 155 SNHHNIWRDAHV---TQRTFHYYHPGTKGLDFAALMDDIKNA---PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAK 228 (337)
Q Consensus 155 ~~y~~~~~~~G~---~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~ 228 (337)
+.+...++..|. +++.+|+. + ++.+|++.|++.+.+. ..++.+|+.++|+||||.+.+ +++|+++|+++
T Consensus 214 ~s~~~~~~~~g~g~~~v~~v~~~-~-~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~---l~~I~~la~~~ 288 (515)
T 2jis_A 214 YSIQKGAAFLGLGTDSVRVVKAD-E-RGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDP---LEAIADVCQRH 288 (515)
T ss_dssp THHHHHHHHTTSCGGGEEEECBC-T-TSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCC---HHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCcEEEEecC-C-CCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccC---HHHHHHHHHHc
Confidence 999999998888 89999873 3 5889999999988641 112455556889999999976 77889999999
Q ss_pred CceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCH
Q 047180 229 GHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDE 290 (337)
Q Consensus 229 ~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~ 290 (337)
|+++++|++|..+... .+.... .+.....--+++.|++|.++.| .++|++++ +++
T Consensus 289 g~~l~vD~a~~~~~~~-~~~~~~---~~~g~~~aD~v~~s~hK~l~~p-~g~G~l~~--~~~ 343 (515)
T 2jis_A 289 GLWLHVDAAWGGSVLL-SQTHRH---LLDGIQRADSVAWNPHKLLAAG-LQCSALLL--QDT 343 (515)
T ss_dssp TCEEEEEETTGGGGGG-CTTTGG---GGTTGGGCSEEEECTTSTTCCC-SCCEEEEE--SCC
T ss_pred CCeEEEehhhhhHHHh-ChhhHh---hcCCCccCCEEEECcccccCCC-CCeeEEEE--eCh
Confidence 9999999999876531 110000 1111111236677999999854 67999987 444
No 218
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.55 E-value=6.6e-15 Score=140.17 Aligned_cols=160 Identities=9% Similarity=-0.074 Sum_probs=101.2
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEe-eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcc-hHHHHHhc--CceeeE
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQ-SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSN-HHNIWRDA--HVTQRT 170 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~-t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~-y~~~~~~~--G~~~~~ 170 (337)
..++|+.+++++ +.. ++++ +++ |+||++++.+++..+.+ || .+.+..+.|.. +...+... |++++.
T Consensus 80 ~~~~~~~la~~~-g~~----~~~~--i~~~t~g~t~al~~~~~~l~~--~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~ 149 (398)
T 2fyf_A 80 VGRVRSGLAELF-SLP----DGYE--VILGNGGATAFWDAAAFGLID--KR-SLHLTYGEFSAKFASAVSKNPFVGEPII 149 (398)
T ss_dssp HHHHHHHHHHHT-TCC----TTCE--EEEEETCHHHHHHHHHHHTCS--SC-EEEEECSHHHHHHHHHHHHCTTSCCCEE
T ss_pred HHHHHHHHHHHh-CCC----CCce--EEEeCCchhHHHHHHHHHhcC--CC-eEEEeCCHHHHHHHHHHHHhCCCCceEE
Confidence 356777777765 321 1233 456 99999999999987754 66 23332222221 12245555 888888
Q ss_pred eeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccch
Q 047180 171 FHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDA 250 (337)
Q Consensus 171 ~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~ 250 (337)
+++. .++..+.+ +. ++.+++++ ++||||||.+++.+++.++ +|+++|+|++|..+... . +
T Consensus 150 v~~~--~g~~~~~~-----i~--~~~~~v~~-~~~~nptG~~~~~~~i~~~------~~~~vivD~a~~~~~~~-~--~- 209 (398)
T 2fyf_A 150 ITSD--PGSAPEPQ-----TD--PSVDVIAW-AHNETSTGVAVAVRRPEGS------DDALVVIDATSGAGGLP-V--D- 209 (398)
T ss_dssp EECC--TTCCCCCC-----CC--TTCSEEEE-ESEETTTTEECCCCCCTTC------C-CEEEEECTTTTTTSC-C--C-
T ss_pred EecC--CCCCCCcc-----cc--CCCCEEEE-eCcCCCcceecchHHhhhh------cCCeEEEEeccccCCcc-c--C-
Confidence 8873 23333321 22 23345544 7899999999998887765 89999999999866421 1 1
Q ss_pred HHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 251 KAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 251 ~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+.. ..+++.|+||.||++| ++||+++ +++.++++
T Consensus 210 -----~~~---~di~~~s~sK~~~~~g-g~g~l~~---~~~~~~~l 243 (398)
T 2fyf_A 210 -----IAE---TDAYYFAPQKNFASDG-GLWLAIM---SPAALSRI 243 (398)
T ss_dssp -----GGG---CSEEEECTTSTTCSCS-SEEEEEE---CHHHHHHH
T ss_pred -----ccc---CcEEEEecCcccCCCC-ceEEEEE---CHHHHHHh
Confidence 111 2367899999999886 6999876 45655554
No 219
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.31 E-value=4.7e-16 Score=151.55 Aligned_cols=240 Identities=13% Similarity=0.021 Sum_probs=142.4
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchh
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTG 129 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~ 129 (337)
...||+..|.....-| ...|.|.+|+.+ +.......| +.....+|.+.+++++- . .+. ++.+++|++
T Consensus 100 ~~yiD~~~~~~~~~lG--h~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~p--~-----~~~--v~~~nSGse 167 (465)
T 2yky_A 100 HAYVNFLGEYTAGLFG--HSHPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRFP--S-----IDL--VRFTNSGTE 167 (465)
Confidence 3578887764321112 134556666544 322222334 33445667777777642 1 123 468899999
Q ss_pred HHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHH----hcCc--eeeEeeeccCCCCCCChHHHHHHHHcCC-CCeEEEEe
Q 047180 130 ACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWR----DAHV--TQRTFHYYHPGTKGLDFAALMDDIKNAP-NGSFFLLH 202 (337)
Q Consensus 130 al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~----~~G~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~-~~~~ili~ 202 (337)
|+..++.+......+++|++.+++|..+...+. ..|. .++.+|+ -|++.+++.+++.+ +.+++++.
T Consensus 168 A~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~e 240 (465)
T 2yky_A 168 ANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVE 240 (465)
Confidence 999988765322245999999999988765433 1222 2233322 26788888776422 22345543
Q ss_pred CCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccc
Q 047180 203 ACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVG 281 (337)
Q Consensus 203 ~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG 281 (337)
+ .+|+||. +.+++.+++|.++|+++|+++|+||+|. |..+. ......+ + ...-+.||||.+|. |+|+|
T Consensus 241 p-v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~g~----~~a~~~~---g-v~pDi~t~sK~lg~-G~piG 309 (465)
T 2yky_A 241 P-MLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRLSG----GGAQEML---G-ISADLTTLGKYIGG-GMSFG 309 (465)
Confidence 3 3556995 4578999999999999999999999999 74321 1111111 1 11224589999996 99999
Q ss_pred eeEeeeCCHHHHHHHHHH-HHh-hhcccccCCChhHHHHHHHHhC
Q 047180 282 CLSVLCEDEKQAVAVKSQ-LQQ-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~-l~~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
|+++ ++++++.+... ... ....++ +.+.++|.++..+|+
T Consensus 310 ~v~~---~~~i~~~l~~~~~g~~~~~~T~-~~npla~aAa~aaL~ 350 (465)
T 2yky_A 310 AFGG---RRDLMERFDPARDGAFAHAGTF-NNNILTMSAGHAALT 350 (465)
Confidence 9875 34454444320 010 112233 346677877766664
No 220
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.53 E-value=8.3e-14 Score=141.62 Aligned_cols=168 Identities=14% Similarity=0.115 Sum_probs=115.2
Q ss_pred CHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeec
Q 047180 95 SVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYY 174 (337)
Q Consensus 95 ~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~ 174 (337)
..++++.+|+++ +.. . .++.++|++.|+..++..+.. |||+|+++.|+|..+...++..|++++.++..
T Consensus 197 i~eaE~~lA~~f-Ga~-------~-a~~v~nGts~An~~ai~al~~--pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~ 265 (715)
T 3n75_A 197 HKEAEQYIARVF-NAD-------R-SYMVTNGTSTANKIVGMYSAP--AGSTILIDRNCHKSLTHLMMMSDVTPIYFRPT 265 (715)
T ss_dssp HHHHHHHHHHHH-TCS-------E-EEEESSHHHHHHHHHHHHHCC--TTCEEEEESSCCHHHHHHHHHSCCEEEEECCC
T ss_pred HHHHHHHHHHHh-CCC-------C-ceEECcHHHHHHHHHHHHhCC--CCCEEEECCCccHHHHHHHHHcCCEEEEEecc
Confidence 567888888876 432 1 246678888888888777766 99999999999999999999999999988763
Q ss_pred cCCCCCC---------ChHHHHHHHHcCCCCe---EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 175 HPGTKGL---------DFAALMDDIKNAPNGS---FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 175 ~~~~~~~---------d~~~l~~~l~~~~~~~---~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
. +++++ |++.+++++++.+..+ ++++ ++| ||+|.+++.+ +|+++|+++ .+++||+|....
T Consensus 266 ~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~viv-t~p-n~~G~v~dl~---~I~ela~~~--~livDEAH~~~~ 337 (715)
T 3n75_A 266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVI-TNS-TYDGLLYNTD---FIKKTLDVK--SIHFDSAWVPYT 337 (715)
T ss_dssp B-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEE-ESS-CTTSEEECHH---HHHHHCCCS--EEEEECTTCTTG
T ss_pred c-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEE-ECC-CCCCccCCHH---HHHHHhCcC--cEEEcccccccc
Confidence 2 24554 8999999998643222 4454 678 9999999765 555666554 378999998653
Q ss_pred -CCCCccchHHHHHhhhc--CCe-EEEEecccccccccccc-cceeEee
Q 047180 243 -SGDPERDAKAIRIFLKD--GHL-LGLAQSYAKNMGLYGQR-VGCLSVL 286 (337)
Q Consensus 243 -~~~~~~~~~~~~~~~~~--~~~-~i~~~S~SK~~~~~G~R-vG~~~~~ 286 (337)
+++ .......+... .+. ++++.|++|+++ |+. .|++++.
T Consensus 338 ~f~~---~~~~~~al~~g~~aD~vii~~~S~hKtL~--gltqgs~i~v~ 381 (715)
T 3n75_A 338 NFSP---IYEGKCGMSGGRVEGKVIYETQSTHKLLA--AFSQASMIHVK 381 (715)
T ss_dssp GGSG---GGTTSSTTSSSCCTTCEEEEEECHHHHSS--CCTTCEEEEEE
T ss_pred ccCC---ccccccccccCcCCCEEEEEEeccccccc--CCCCeeEEEeC
Confidence 221 00001111110 123 356899999964 664 5666653
No 221
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.50 E-value=1.3e-13 Score=135.01 Aligned_cols=202 Identities=13% Similarity=0.096 Sum_probs=111.8
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCC---CCC---HHHH----HHHHHHHhCCCCcccccCce-
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPM---GGS---VKMV----EETLKLAYGDNSEFIKDKRI- 119 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~---~G~---~~lr----~aia~~~~~~~~~~~~~~~i- 119 (337)
+.|.|..+. -++++.|.+|+.. +......+|+.. .|. .++. +.++++ ++.. .+.+
T Consensus 55 ~~i~lias~-------n~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l-~g~~-----~~~~~ 121 (490)
T 2a7v_A 55 RGLELIASE-------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEA-FDLD-----PAQWG 121 (490)
T ss_dssp HSEECCTTC-------CCCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHH-TTCC-----TTTEE
T ss_pred cCceEECCC-------CCCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHH-cCCC-----cccCc
Confidence 456666542 2367888888765 322222344432 233 3555 444443 3432 1111
Q ss_pred eEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH--------HHHhcCce--eeEeeeccCCCCCCChHHHHHH
Q 047180 120 AAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN--------IWRDAHVT--QRTFHYYHPGTKGLDFAALMDD 189 (337)
Q Consensus 120 ~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~--------~~~~~G~~--~~~~~~~~~~~~~~d~~~l~~~ 189 (337)
..+++.+|++|+..++..+.+ |||+|++++|.|..+.. .+...|.. ++++++ +++++.+|++++++.
T Consensus 122 ~~v~~~sGt~An~~al~al~~--pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~v-d~~~~~iD~d~le~~ 198 (490)
T 2a7v_A 122 VNVQPYSGSPANLAVYTALLQ--PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-NPKTGLIDYNQLALT 198 (490)
T ss_dssp EECCCSSHHHHHHHHHHHHCC--SCEECCC-------------------------------CCB-CTTTCSBCHHHHHHH
T ss_pred eEEeCCchHHHHHHHHHHHcC--CCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccc-ccccCCcCHHHHHHH
Confidence 135666889999888877766 99999999999876432 23456654 344444 334678999999998
Q ss_pred HHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEec
Q 047180 190 IKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQS 268 (337)
Q Consensus 190 l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S 268 (337)
+...+ .++++ .++|+||+. . ++++|+++|+++|+++++|+++. ++...+... .+ +. +. -+++.|
T Consensus 199 l~~~~-~klIi-~~~s~~~~~--~---dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~--~~---~~--~a-Div~~S 263 (490)
T 2a7v_A 199 ARLFR-PRLII-AGTSAYARL--I---DYARMREVCDEVKAHLLADMAHISGLVAAKVIP--SP---FK--HA-DIVTTT 263 (490)
T ss_dssp HHHHC-CSEEE-ECCSSCCSC--C---CHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSC--CG---GG--TC-SEEEEE
T ss_pred HhhcC-CcEEE-EcCCCCCCc--c---cHHHHHHHHHHcCCEEEEccccccccccCCcCC--CC---CC--CC-CEEEEC
Confidence 86422 34444 478899864 2 37899999999999999999953 433211110 01 21 11 267789
Q ss_pred ccccccccccccceeEee
Q 047180 269 YAKNMGLYGQRVGCLSVL 286 (337)
Q Consensus 269 ~SK~~~~~G~RvG~~~~~ 286 (337)
+||+++ |+|.|++++.
T Consensus 264 ~hK~l~--Gp~GG~i~~~ 279 (490)
T 2a7v_A 264 THKTLR--GARSGLIFYR 279 (490)
T ss_dssp SSGGGC--SCSCEEEEEE
T ss_pred CcccCc--cccchheeec
Confidence 999984 8899999874
No 222
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.50 E-value=6.7e-13 Score=125.62 Aligned_cols=156 Identities=16% Similarity=0.130 Sum_probs=110.0
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchH--HHHHhcC--ceeeEeeeccC------CC-CCCChHHHHHH
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHH--NIWRDAH--VTQRTFHYYHP------GT-KGLDFAALMDD 189 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~--~~~~~~G--~~~~~~~~~~~------~~-~~~d~~~l~~~ 189 (337)
++.|.||++++.+++.++ . +||+|+++++.|+.+. .+++..| .+++.++.... .. ..+|++++++.
T Consensus 54 v~~~~sgt~a~~~~~~~~-~--~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~d~~~l~~~ 130 (379)
T 3ke3_A 54 VIIPGSGTYGMEAVARQL-T--IDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERTEDTEAPKPFAPVDIETAVAK 130 (379)
T ss_dssp EEEESCHHHHHHHHHHHH-C--TTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEESSCCSSCCCEECCCHHHHHHH
T ss_pred EEEcCChhHHHHHHHHhC-C--CCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEeccccccccccCCCCCCCHHHHHHH
Confidence 577889999999887654 3 8999999999998754 3455556 36677765220 01 24799999998
Q ss_pred HHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecc
Q 047180 190 IKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSY 269 (337)
Q Consensus 190 l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~ 269 (337)
+.+. +.+.+++ +.++||||.+++.+++++|+++|+++|+++|+|+++. -. ..-+ .. ..+ --+++.|+
T Consensus 131 i~~~-~~~~v~~-~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~---~~~~---~~---~~~-~d~~~~s~ 197 (379)
T 3ke3_A 131 IKED-KSAIVYA-PHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GC---VWLD---MK---ELG-IDVLISAP 197 (379)
T ss_dssp HHHH-TCSEEEE-ESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TT---CCCC---HH---HHT-CSEEEECT
T ss_pred Hhhc-CCcEEEE-EeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CC---cccc---cc---ccC-CCEEEecc
Confidence 8532 2344444 6789999999999999999999999999999999975 21 1111 11 112 23667899
Q ss_pred cccccccccccceeEeeeCCHHHHHHH
Q 047180 270 AKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 270 SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+|.++. +..+|++++ +++.++.+
T Consensus 198 ~K~l~~-~~g~g~~~~---~~~~~~~l 220 (379)
T 3ke3_A 198 QKGWSS-TPCAGLVML---SAAAIKKV 220 (379)
T ss_dssp TTTTCS-CCCEEEEEE---CHHHHHHH
T ss_pred hhhcCC-CCceEEEEE---CHHHHHhh
Confidence 999874 446899876 45555544
No 223
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.47 E-value=1.2e-13 Score=135.07 Aligned_cols=249 Identities=9% Similarity=-0.017 Sum_probs=142.5
Q ss_pred CCeeEeeeeeeecCCCCcccchHHHHHHHH-hcC---cCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeecc
Q 047180 51 PDKVNVGVGAYRDDNGKPVVLECVREAERR-IAG---TANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLS 126 (337)
Q Consensus 51 ~~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~---~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g 126 (337)
...||+..|.+...-| ..+|.|.+|+.+ +.. .....|+. ....++++.+++++...... ..++ ++.++|
T Consensus 63 ~~ylD~~~g~~~~~lG--h~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~~--~~~~--v~f~~s 135 (472)
T 1ohv_A 63 NRMLDLYSQISSIPIG--YSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAPK--GMSQ--LITMAC 135 (472)
T ss_dssp CEEEESSHHHHTCSSC--BTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCCT--TCCE--EEEESS
T ss_pred CEEEECCCCHhhcccC--CCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCCC--CcCE--EEEeCC
Confidence 4578887775432122 245677777654 211 11112332 34578999999976443211 2233 678999
Q ss_pred chhHHHHHHHHHhhh-----------------------CCC---CeEEEcCCCCcchHHHH-HhcCcee-----------
Q 047180 127 GTGACRLFADFQKRF-----------------------HPD---SQIYIPVPTWSNHHNIW-RDAHVTQ----------- 168 (337)
Q Consensus 127 ~~~al~~~~~~l~~~-----------------------~pg---d~Vlv~~P~y~~y~~~~-~~~G~~~----------- 168 (337)
|++|+..++.++..+ .|| ++|++.+|+|..+.... ...|...
T Consensus 136 GseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~ 215 (472)
T 1ohv_A 136 GSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDW 215 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCC
T ss_pred chhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCC
Confidence 999999998766311 045 89999999999986644 3444321
Q ss_pred --eEeeeccCC---C--C-----CCChHHHHHHHHcCCC---CeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCcee
Q 047180 169 --RTFHYYHPG---T--K-----GLDFAALMDDIKNAPN---GSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFP 232 (337)
Q Consensus 169 --~~~~~~~~~---~--~-----~~d~~~l~~~l~~~~~---~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~i 232 (337)
+++|.+... . + ..|++.|++.+.+... +..+|++.+.+|+||. +.+++.+++|.++|+++|+++
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~ll 295 (472)
T 1ohv_A 216 PIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAF 295 (472)
T ss_dssp CEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEE
T ss_pred cccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEE
Confidence 122211000 0 0 1257888888864210 3344443445788996 678999999999999999999
Q ss_pred EEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhhhcccccCCC
Q 047180 233 FFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQLARPMYSNPP 312 (337)
Q Consensus 233 i~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 312 (337)
|+||+|.+|.... .......+ ... ...-+.||||.| +.| ||++ .++ +. .+.........+.+
T Consensus 296 i~DEv~~g~g~~g---~~~~~~~~-gv~-~~~Di~t~sK~~-l~G---G~~~----~~~----~~-~~~~~~~~~T~~~~ 357 (472)
T 1ohv_A 296 LVDEVQTGGGSTG---KFWAHEHW-GLD-DPADVMTFSKKM-MTG---GFFH----KEE----FR-PNAPYRIFNTWLGD 357 (472)
T ss_dssp EEECTTTTTTTTS---SSSGGGGG-CCS-SCCSEEEECGGG-SSE---EEEE----CGG----GS-CSSSSSSCCSSSSC
T ss_pred EEeCcccCCCCCC---Cchhcccc-CCC-CCCCEEEEcccc-ccC---CccC----chh----hc-ccccccccCccCcc
Confidence 9999998865311 00111111 100 002245899996 445 6654 222 11 11111112222456
Q ss_pred hhHHHHHHHHhC
Q 047180 313 VHGALIVSTILG 324 (337)
Q Consensus 313 ~~~q~~~~~~l~ 324 (337)
.++|.++..+|+
T Consensus 358 ~~~~aaa~aal~ 369 (472)
T 1ohv_A 358 PSKNLLLAEVIN 369 (472)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 778887776665
No 224
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.46 E-value=4.4e-13 Score=129.40 Aligned_cols=155 Identities=11% Similarity=0.015 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceeeEe
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQRTF 171 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~~~ 171 (337)
.++++.+++++ +. ++++ ++++.|++.+...+..++ .+.+||+|+++.|+|+.|...+ +..|++++.+
T Consensus 111 ~~~~~~la~~~-g~-----~~~~--i~~~~g~taa~ea~~~a~-~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v 181 (438)
T 1wyu_A 111 FEYQTMIAELA-GL-----EIAN--ASMYDGATALAEGVLLAL-RETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTL 181 (438)
T ss_dssp HHHHHHHHHHH-TS-----SEEC--SCBSSHHHHHHHHHHHHH-HHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHh-CC-----Cccc--eEEeCcHHHHHHHHHHHH-hcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEE
Confidence 35666666664 32 1223 357888884333333222 1228999999999999998665 4489999999
Q ss_pred eeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEc---ccCCCCCCCCCcc
Q 047180 172 HYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFD---MAYQGFASGDPER 248 (337)
Q Consensus 172 ~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~D---e~Y~~~~~~~~~~ 248 (337)
+. + ++.+|+++ +. + ++.+++.++| ||||.+. ++++|+++|+++|+++++| .+|..+. .
T Consensus 182 ~~-~--~~~~d~~~----i~--~-~t~~v~i~~p-n~tG~~~---~l~~i~~la~~~g~~vivd~d~~a~g~~~-----~ 242 (438)
T 1wyu_A 182 PL-E--GGRTPLPE----VG--E-EVGAVVVQNP-NFLGALE---DLGPFAEAAHGAGALFVAVADPLSLGVLK-----P 242 (438)
T ss_dssp CC-B--TTBCCCCC----CC--T-TEEEEEEESS-CTTSBCC---CHHHHHHHHHHTTCEEEEECCTTGGGTBC-----C
T ss_pred cC-c--CCccCHHH----hC--C-CeEEEEEECC-CCCeEEe---cHHHHHHHHHHcCCEEEEEechhhccCcC-----C
Confidence 86 3 35677766 33 2 3444445779 9999998 4788899999999999955 2243221 1
Q ss_pred chHHHHHhhhcCCeEEEEe--cccccccccccccceeEe
Q 047180 249 DAKAIRIFLKDGHLLGLAQ--SYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~--S~SK~~~~~G~RvG~~~~ 285 (337)
+ . ..+.++++.+ +|+|.+++.|.|+||+++
T Consensus 243 ---~-~---~~g~D~~~~s~kk~~~~~~~~Gp~~G~l~~ 274 (438)
T 1wyu_A 243 ---P-G---AYGADIAVGDGQSLGLPMGFGGPHFGFLAT 274 (438)
T ss_dssp ---H-H---HHTCSEEEEECTTTTCCCGGGCSCCEEEEE
T ss_pred ---C-c---cCCCCEEEECCcccCCCccCCCCCeeEEEE
Confidence 0 1 1233444442 334444577889999986
No 225
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.44 E-value=5.1e-13 Score=130.73 Aligned_cols=207 Identities=11% Similarity=-0.029 Sum_probs=140.0
Q ss_pred hHHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCccccc------CceeEEeeccchhHHHHHHHHHhhh----
Q 047180 72 ECVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKD------KRIAAVQSLSGTGACRLFADFQKRF---- 141 (337)
Q Consensus 72 ~~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~------~~i~~~~t~g~~~al~~~~~~l~~~---- 141 (337)
..+.+++..........|..+.+..++.+.+++|+.+..+..... ..-..++|.||+++..+++.+..+.
T Consensus 93 ~~~~~~~~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~ 172 (481)
T 4e1o_A 93 SLLGDMLADAINCLGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILE 172 (481)
T ss_dssp HHHHHHHHHHHCCCCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCcccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHH
Confidence 344555544322234678777788999999999974331110000 0013578999999988777554321
Q ss_pred -------------CCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCC
Q 047180 142 -------------HPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACA 205 (337)
Q Consensus 142 -------------~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p 205 (337)
.|+++|+++.+++..+...++..|.+++.+|. + +++.+|+++|++++++.. ..+++++.+.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~-~-~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~ 250 (481)
T 4e1o_A 173 MKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPV-D-DNFSLRGEALQKAIEEDKQRGLVPVFVCATLG 250 (481)
T ss_dssp HHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECC-C-TTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEc-C-CCCcCCHHHHHHHHHHHHhCCCCcEEEEEecC
Confidence 15789999999999999999999999999997 3 368899999999987421 12455666789
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhh-hc-CCeEEEEeccccccccccccccee
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFL-KD-GHLLGLAQSYAKNMGLYGQRVGCL 283 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~~S~SK~~~~~G~RvG~~ 283 (337)
+|+||.+ +.+++|+++|++||+++++|.+|...... ... .+... .. .... +..+++|.++.| .-.|++
T Consensus 251 ~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~--~~~---~~~~~~gi~~aDs-i~~~~hK~l~~p-~g~g~l 320 (481)
T 4e1o_A 251 TTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFL--CPE---FRGFLKGIEYADS-FTFNPSKWMMVH-FDCTGF 320 (481)
T ss_dssp CTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGG--SGG---GGGGGTTGGGCSE-EEECHHHHSSCC-SSCEEE
T ss_pred CCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHh--Chh---hHHHhcCcccCCE-EEEChHHhcCCC-CceEEE
Confidence 9999987 55888999999999999999999875321 011 11111 10 1133 446889999876 446777
Q ss_pred EeeeCCHHH
Q 047180 284 SVLCEDEKQ 292 (337)
Q Consensus 284 ~~~~~~~~~ 292 (337)
++ .++..
T Consensus 321 ~~--~~~~~ 327 (481)
T 4e1o_A 321 WV--KDKYK 327 (481)
T ss_dssp EE--SBHHH
T ss_pred EE--eCHHH
Confidence 65 55553
No 226
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.36 E-value=4.2e-12 Score=124.06 Aligned_cols=207 Identities=10% Similarity=-0.054 Sum_probs=136.6
Q ss_pred HHHHHHHHhcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccc-----cCceeEEeeccchhHHHHHHHHHhhh------
Q 047180 73 CVREAERRIAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIK-----DKRIAAVQSLSGTGACRLFADFQKRF------ 141 (337)
Q Consensus 73 ~v~~a~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~-----~~~i~~~~t~g~~~al~~~~~~l~~~------ 141 (337)
.+.+.+..........|..+.+..++.+.+++|+.+..+.... ...-..++|.||+++..+++.+....
T Consensus 89 ~~~~~l~~~~n~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~ 168 (475)
T 3k40_A 89 IVADMLSGAIACIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVK 168 (475)
T ss_dssp HHHHHHHHHHCCCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhh
Confidence 3455554432223456777778889999999987443221110 00113678999999977766554221
Q ss_pred -----------CCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCC---CCeEEEEeCCCCC
Q 047180 142 -----------HPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAP---NGSFFLLHACAHN 207 (337)
Q Consensus 142 -----------~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~---~~~~ili~~~p~N 207 (337)
.|+++|+++.+.+..+...++..|++++.+|. ++ ++ +|+++|++++.+.. ..+++++.+.++|
T Consensus 169 ~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~-d~-~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t 245 (475)
T 3k40_A 169 ELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQS-EN-HR-MRGAALEKAIEQDVAEGLIPFYAVVTLGTT 245 (475)
T ss_dssp HHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECC-BT-TB-CCHHHHHHHHHHHHHTTCEEEEEEEEBSCT
T ss_pred ccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEEC-CC-CC-cCHHHHHHHHHHHHHCCCccEEEEEEecCC
Confidence 13478999999999999999999999999998 33 46 99999999987521 1245555578999
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEeee
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLC 287 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~ 287 (337)
+||.+ +.+++|+++|+++|+++++|.+|.....- ....... +.....--.+..|++|.++.| ..+|++++
T Consensus 246 ~~G~~---~~l~~I~~la~~~~~~lhvD~A~~~~~~~--~~~~~~~--~~gi~~~Ds~~~~~hK~l~~p-~g~g~l~~-- 315 (475)
T 3k40_A 246 NSCAF---DYLDECGPVGNKHNLWIHVDAAYAGSAFI--CPEYRHL--MKGIESADSFNFNPHKWMLVN-FDCSAMWL-- 315 (475)
T ss_dssp TTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGG--SGGGGGG--GTTGGGCSEEEECHHHHSSCC-SSCEEEEE--
T ss_pred CCcCc---CCHHHHHHHHHHhCCeEEEeHHhHHHHHh--CHhhHHH--hcCcccCCEEEECchhccCCC-CceEEEEE--
Confidence 99998 45788999999999999999999864310 0111000 111101124457889988754 56788776
Q ss_pred CCHHH
Q 047180 288 EDEKQ 292 (337)
Q Consensus 288 ~~~~~ 292 (337)
.++..
T Consensus 316 ~~~~~ 320 (475)
T 3k40_A 316 KDPSW 320 (475)
T ss_dssp SSGGG
T ss_pred eCHHH
Confidence 45543
No 227
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=98.82 E-value=1.3e-07 Score=90.64 Aligned_cols=165 Identities=12% Similarity=0.022 Sum_probs=108.5
Q ss_pred eEEeeccchhHHHHHH-HHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeee-ccCCCCCCChHHHHHHHHcCC-C
Q 047180 120 AAVQSLSGTGACRLFA-DFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHY-YHPGTKGLDFAALMDDIKNAP-N 195 (337)
Q Consensus 120 ~~~~t~g~~~al~~~~-~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~-~ 195 (337)
..+.++|+|+++..++ .++....|| |.|++|.=+--.....+..+|++++.++. .+++..++|++++++++++.+ +
T Consensus 136 ~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~id~e~le~aI~e~ga~ 215 (501)
T 3hl2_A 136 NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPD 215 (501)
T ss_dssp EEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEECHHHHHHHHHHHCGG
T ss_pred cEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCCCHHHHHHHHHhcCCC
Confidence 3688999996655554 444432234 99999999999999999999999888864 233357889999999998753 3
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcC-CeEEEEeccccccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDG-HLLGLAQSYAKNMG 274 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~ 274 (337)
...+++.+.+.|-.|.+ +.+++|+++|++||+.+++|+||..... +. ...+...+ ..+ -. +++.|.=|.+-
T Consensus 216 ~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~--~~-~~lp~sA~-~~GrAD-~vVqS~HK~ll 287 (501)
T 3hl2_A 216 CILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSS--KC-MHLIQQGA-RVGRID-AFVQSLDKNFM 287 (501)
T ss_dssp GEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCH--HH-HHHHHHHH-HHSCCC-EEEEEHHHHHC
T ss_pred cEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhh--hh-hhhHHHHH-hcCCCc-EEEecccccce
Confidence 33444444444533343 4688999999999999999999986531 10 11111112 223 22 46678889875
Q ss_pred cccccc-ceeEeeeCCHHHHHHH
Q 047180 275 LYGQRV-GCLSVLCEDEKQAVAV 296 (337)
Q Consensus 275 ~~G~Rv-G~~~~~~~~~~~~~~~ 296 (337)
++ + |.++ ...+++.++++
T Consensus 288 vp---IGG~ii-~~~d~e~l~~~ 306 (501)
T 3hl2_A 288 VP---VGGAII-AGFNDSFIQEI 306 (501)
T ss_dssp CC---SSCEEE-EESCHHHHHHH
T ss_pred ee---cCceEE-EeCCHHHHHHH
Confidence 54 3 3343 23677766654
No 228
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=98.74 E-value=1.3e-07 Score=90.99 Aligned_cols=167 Identities=12% Similarity=-0.050 Sum_probs=107.0
Q ss_pred EEeeccchhHHHHH-HHHHhhhC-CCCeEEEcCCCCcchHHHHHhcCceeeEeee-ccCCCCCCChHHHHHHHHcCC-CC
Q 047180 121 AVQSLSGTGACRLF-ADFQKRFH-PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY-YHPGTKGLDFAALMDDIKNAP-NG 196 (337)
Q Consensus 121 ~~~t~g~~~al~~~-~~~l~~~~-pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~-~~~~~~~~d~~~l~~~l~~~~-~~ 196 (337)
.++++|+|++..++ +.++.... +++.|+++.=+-.....++..+|..++.++. .+++...+|++.+++++++.+ ..
T Consensus 119 ~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~~~~~~~~id~~~le~aI~~~~~~~ 198 (450)
T 3bc8_A 119 CFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENVLEGDELRTDLKAVEAKIQELGPEH 198 (450)
T ss_dssp EEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCEEETTEEECCHHHHHHHHHHHCGGG
T ss_pred EEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEeeecCccCCcCHHHHHHHHHhcCCCC
Confidence 57889998554444 44443222 3799999988888888999999999777753 223357899999999997644 23
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEeccccccccc
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLY 276 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 276 (337)
+.+|+.+...|.+|.+ +.+++|+++|++||+++++|+||..... +.. ..+...+...+-+. ++.|.=|++..+
T Consensus 199 ~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~--~~~-~l~~~a~~~~~AD~-~v~S~HK~l~a~ 271 (450)
T 3bc8_A 199 ILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSS--KCM-HLIQQGARVGRIDA-FVQSLDKNFMVP 271 (450)
T ss_dssp EEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCH--HHH-HHHHHHHHHSCCCE-EEEEHHHHHSCC
T ss_pred EEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhh--hhH-hHHHHHhcccCCCE-EEECCccCCCch
Confidence 4444444344555655 4688899999999999999999986521 100 00111121112233 557788988643
Q ss_pred ccccceeEeeeCCHHHHHHHH
Q 047180 277 GQRVGCLSVLCEDEKQAVAVK 297 (337)
Q Consensus 277 G~RvG~~~~~~~~~~~~~~~~ 297 (337)
.-.|++.+ .|++.++++.
T Consensus 272 -~~~~~l~~--rd~~~~~~~~ 289 (450)
T 3bc8_A 272 -VGGAIIAG--FNEPFIQDIS 289 (450)
T ss_dssp -SSCEEEEE--SCHHHHHHHH
T ss_pred -hccEEEEe--cCHHHHHHHH
Confidence 23444443 6777665553
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=98.58 E-value=5.3e-07 Score=87.27 Aligned_cols=210 Identities=12% Similarity=0.001 Sum_probs=117.4
Q ss_pred CeeEeeeeeeecCCCCcccchHHHHHHHH-hcCcCCCCCCCCCCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhH
Q 047180 52 DKVNVGVGAYRDDNGKPVVLECVREAERR-IAGTANMEYLPMGGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGA 130 (337)
Q Consensus 52 ~~i~l~~G~~~~~~~~~~~~~~v~~a~~~-~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~a 130 (337)
..||+..|.-...-| .-.|.|.+|+.+ +....... .+..-..+|.+.+++++-+ .+. +..+++|++|
T Consensus 88 ~ylD~~~g~~~~~lG--H~hp~v~~Av~~q~~~~~~~~-~~~~~~~~lae~l~~~~p~-------~~~--v~f~~SGsEA 155 (454)
T 4ao9_A 88 RYADFIAEYTAGVYG--HSAPEIRDAVIEAMQGGINLT-GHNLLEGRLARLICERFPQ-------IEQ--LRFTNSGTEA 155 (454)
T ss_dssp EEEESSGGGGTTTTC--SCCHHHHHHHHHHHHTCSCCC-SEESSHHHHHHHHHHHSTT-------CSE--EEEESSHHHH
T ss_pred EEEEccccHHhhccc--CCCHHHHHHHHHHHhcCCCcc-CCcHHHHHHHHHHHHhCCC-------CCE--EEEeCchHHH
Confidence 467765542111112 134666666544 43221111 1222334677777776522 133 4678999999
Q ss_pred HHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHh-cCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCC
Q 047180 131 CRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRD-AHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPT 209 (337)
Q Consensus 131 l~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~-~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPT 209 (337)
...++++.......++|+...-+|......+-. .+...++.+...- .--|.+.+++.+++.......||.-.-+.-.
T Consensus 156 ~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~--p~nd~~~l~~~l~~~~~~iAavIvEPv~g~~ 233 (454)
T 4ao9_A 156 NLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVL--PYNDAQTARAQIERHGPEIAVVLVEPMQGAS 233 (454)
T ss_dssp HHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEE--CTTCHHHHHHHHHHTGGGEEEEEECSEESTT
T ss_pred HHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccC--CCchHHHHHHHHhhcCCceEEEEeccccCCC
Confidence 999887655433457899998888874321110 1101111110000 0126788888887654333333333234445
Q ss_pred CCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 210 GVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 210 G~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
|.+ .+++.+++|.++|++||+++|.||+..+-. +.. . ....+ ...++++ +|+|.+| .|+-+|.+++
T Consensus 234 G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tGR~-G~~--~--a~e~~-gv~PDi~---t~gK~lg-gG~Piga~~~ 300 (454)
T 4ao9_A 234 GCIPGQPDFLQALRESATQVGALLVFDEVMTSRL-APH--G--LANKL-GIRSDLT---TLGKYIG-GGMSFGAFGG 300 (454)
T ss_dssp TCEECCHHHHHHHHHHHHHHTCEEEEECTTGGGG-STT--C--HHHHH-TCCCSEE---EEEGGGG-TTSSCEEEEE
T ss_pred CccCCchhhHHHHHHHHhhcCCEEEEECCCcCCC-ccc--c--chhcc-CCCCcEE---EeccccC-CCCcceeeee
Confidence 654 578889999999999999999999986521 111 0 11111 2223444 5789998 6899998875
No 230
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=98.14 E-value=5.6e-05 Score=73.10 Aligned_cols=186 Identities=12% Similarity=0.030 Sum_probs=103.6
Q ss_pred EEeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHH-HHHhcCc-------------eeeEeeecc---CCC-CCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHN-IWRDAHV-------------TQRTFHYYH---PGT-KGLD 182 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~-~~~~~G~-------------~~~~~~~~~---~~~-~~~d 182 (337)
++.+++|++|...++++........+|+...-+|.+... .+...|. .+..+|+.. ... ..-+
T Consensus 128 v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~ 207 (456)
T 4atq_A 128 TVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITG 207 (456)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCH
T ss_pred EEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccH
Confidence 467899999999998765543345899999999988643 3333322 123333211 001 1112
Q ss_pred hHHHHHHHH---c--CCCC-eEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCccchHHHH
Q 047180 183 FAALMDDIK---N--APNG-SFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPERDAKAIR 254 (337)
Q Consensus 183 ~~~l~~~l~---~--~~~~-~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~~~~~~~ 254 (337)
.+.+...+. . .+.. ..+++=|- +.-.|. ..+++.+++|.++|++||+++|.||+..+|. .|.+ ....
T Consensus 208 ~~~~~~~~~~~e~~~~~~~iAAvivEPi-qg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~----~a~e 282 (456)
T 4atq_A 208 AEAAKRAITMIEKQIGGDQVAAIIIEPI-QGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEW----FAVD 282 (456)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEEEEECSS-BTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS----SGGG
T ss_pred HHHHHHHHHHHHHhhcCCceEEEEeccc-cCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCcccc----cccc
Confidence 333333222 1 1222 33444333 333454 4678899999999999999999999998873 2211 1111
Q ss_pred HhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHHHHHHHhh-hcccccCCChhHHHHHHHHhC
Q 047180 255 IFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAVKSQLQQL-ARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 255 ~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.+ ...++++ +|+|..| .|+-+|.+++ .+++ .+.+... ...+|++ +.++..++.+.|+
T Consensus 283 ~~-gv~PDiv---t~gK~lg-gg~P~~av~~---~~~i----~~~~~~~~~~~Tf~g-npla~aaala~L~ 340 (456)
T 4atq_A 283 HE-GVVPDII---TMAKGIA-GGLPLSAITG---RADL----LDAVHPGGLGGTYGG-NPVACAAALAAID 340 (456)
T ss_dssp GT-TCCCSEE---EECGGGG-TTSSCEEEEE---EHHH----HTTSCTTSSCCSSSS-CHHHHHHHHHHHH
T ss_pred cc-CCCCchh---hhhhccc-CcCCceeeEe---cHHH----HhcccccCCCCCCCC-ChHHHHhhHHHHH
Confidence 11 1124444 4689998 7899998875 3333 2222221 2234543 4455555555543
No 231
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=97.85 E-value=1.6e-05 Score=74.99 Aligned_cols=156 Identities=13% Similarity=0.025 Sum_probs=93.2
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEe-eccchhHHHHHHHHHhhhCCCCeEEEcCCCCcch--HHHHHhcCceeeEee
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQ-SLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNH--HNIWRDAHVTQRTFH 172 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~-t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y--~~~~~~~G~~~~~~~ 172 (337)
.+.|+.+++++ +.. ++++ ++. |.|+++++.+++.-+....+||+|++..-+.... ...++..|..++.++
T Consensus 61 ~~ar~~la~ll-~~~----~~~e--vif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~ 133 (377)
T 3e77_A 61 NNTENLVRELL-AVP----DNYK--VIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHP 133 (377)
T ss_dssp HHHHHHHHHHH-TCC----TTEE--EEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSC
T ss_pred HHHHHHHHHHh-CCC----CCCe--EEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEec
Confidence 34566677766 321 1123 345 5788999999986555422489987765544332 234566787766666
Q ss_pred eccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHH
Q 047180 173 YYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKA 252 (337)
Q Consensus 173 ~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~ 252 (337)
.. . +++.+++.++..+. ++.+.+.+ ++-.|.||.+.+. +|+++++++++|-+-. +..-+++
T Consensus 134 ~~-~-~~~~~~~~~~~~i~--~~t~lV~~-~h~et~tG~~~pi--------i~~~~~~~~~vD~~q~-~g~~~id----- 194 (377)
T 3e77_A 134 KL-G-SYTKIPDPSTWNLN--PDASYVYY-CANETVHGVEFDF--------IPDVKGAVLVCDMSSN-FLSKPVD----- 194 (377)
T ss_dssp CC-S-SSCSCCCGGGCCCC--TTCSCEEE-ESEETTTTEECSS--------CCCCTTCCEEEECTTT-TTSSCCC-----
T ss_pred cC-C-CcCCCCChHHhccC--CCccEEEE-eCccCchheEchh--------hhccCCCEEEEEcccc-cCCCCCc-----
Confidence 52 2 35566666654443 23334443 5456777999885 3668899999997643 3211111
Q ss_pred HHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 253 IRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 253 ~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+.+. .+ ++.|-=|.+|.+| +|++++
T Consensus 195 ---~~~~--~~-~~~s~~K~~gp~G--~g~l~~ 219 (377)
T 3e77_A 195 ---VSKF--GV-IFAGAQKNVGSAG--VTVVIV 219 (377)
T ss_dssp ---GGGC--SE-EEEEGGGTTSCTT--CEEEEE
T ss_pred ---hhhc--CE-EEEecccccCCCc--cEEEEE
Confidence 1111 24 5567789999888 577765
No 232
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=97.82 E-value=2.1e-05 Score=74.43 Aligned_cols=159 Identities=9% Similarity=-0.015 Sum_probs=92.9
Q ss_pred CCCHHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEEEcCC-CCcc-hHHHHHhcCceeeE
Q 047180 93 GGSVKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIYIPVP-TWSN-HHNIWRDAHVTQRT 170 (337)
Q Consensus 93 ~G~~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P-~y~~-y~~~~~~~G~~~~~ 170 (337)
.-+.+.|+.+++++... ++++| ++.|.|+++++.+++.-+.. +||+|++..= .|.. ....++..| ++..
T Consensus 72 ~~~~~ar~~la~ll~~~-----~~~ev-if~t~~~T~a~n~ai~~l~~--~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~ 142 (386)
T 3qm2_A 72 QVAEEAEQDFRDLLNIP-----SNYKV-LFCHGGGRGQFAGVPLNLLG--DKTTADYVDAGYWAASAIKEAKKYC-APQI 142 (386)
T ss_dssp -CCHHHHHHHHHHHTCC-----TTEEE-EEEESCTTHHHHHHHHHHCT--TCCEEEEEESSHHHHHHHHHHTTTS-EEEE
T ss_pred HHHHHHHHHHHHHhCCC-----CCceE-EEEcCCchHHHHHHHHhccC--CCCeEEEEeCCHHHHHHHHHHHHhC-CeEE
Confidence 34678899999987321 11233 23368999999998865544 8998764433 3322 223445678 8877
Q ss_pred eeec-cCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCcc
Q 047180 171 FHYY-HPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVD-PSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPER 248 (337)
Q Consensus 171 ~~~~-~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~-~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~ 248 (337)
++.. .+.+..++++.++..+. ++.+++. .++-.|-||.+ -+.++ |. +++++++|-+-. +..-+++
T Consensus 143 v~~~~~~~G~~~~~~~~~~~l~--~~t~lV~-~~h~et~tG~~i~pi~~---i~-----~g~~~~vDa~qs-~g~~pid- 209 (386)
T 3qm2_A 143 IDAKITVDGKRAVKPMREWQLS--DNAAYLH-YCPNETIDGIAIDETPD---FG-----PEVVVTADFSST-ILSAPLD- 209 (386)
T ss_dssp EECEEEETTEEEECCGGGCCCC--TTCSCEE-ECSEETTTTEECCCCCC---CC-----TTCCEEEECTTT-TTSSCCC-
T ss_pred EecCcccCCCCCCchHHHhhcC--CCCcEEE-EECCcCCcCEecCchhh---hc-----CCCEEEEEcccc-cCCCCCC-
Confidence 7763 02122266777765554 2333443 35456666996 44333 32 799999998643 3211111
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
+.+. .+ ++.|-=|.+|.+| +|++++
T Consensus 210 -------v~~~--~~-~~~s~hK~lGP~G--~g~l~v 234 (386)
T 3qm2_A 210 -------VSRY--GV-IYAGAQKNIGPAG--LTLVIV 234 (386)
T ss_dssp -------GGGC--SE-EEEETTTTTCCTT--EEEEEE
T ss_pred -------cccc--CE-EEEecccccCCCc--cEEEEE
Confidence 1112 24 4467789999777 677776
No 233
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=97.81 E-value=0.00015 Score=67.93 Aligned_cols=160 Identities=13% Similarity=0.069 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHHHhhhCCCCeEE-EcCCCCcc-hHHHHHhcCceeeEeee
Q 047180 96 VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADFQKRFHPDSQIY-IPVPTWSN-HHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 96 ~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~l~~~~pgd~Vl-v~~P~y~~-y~~~~~~~G~~~~~~~~ 173 (337)
.+.|+.+++++ +.. ++.+| +++|.||++++.+++.-+. +||++. +.+-.|.. ....++..|+++..++.
T Consensus 53 ~~~r~~la~ll-~~~----~~~~v-~f~t~~~T~a~n~~~~~~~---~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~ 123 (361)
T 3m5u_A 53 FGAQEKAKKLY-ELN----DDYEV-LFLQGGASLQFAMIPMNLA---LNGVCEYANTGVWTKKAIKEAQILGVNVKTVAS 123 (361)
T ss_dssp HHHHHHHHHHH-TCC----TTEEE-EEESSHHHHHHHHHHHHHC---CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHHHHHHh-CCC----CCceE-EEEcCcHHHHHHHHHHhcC---CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEec
Confidence 34566677766 321 12233 3449999999998876543 577652 33323332 23345667999988887
Q ss_pred ccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCCCCCCccchHHH
Q 047180 174 YHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFASGDPERDAKAI 253 (337)
Q Consensus 174 ~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~~~~~~~~~~~ 253 (337)
.....+..+++. + +. ++.+++.+ ++..|-||.+.+. | ++ +++++++|-+-. +..-+++
T Consensus 124 ~~~g~~~~~~~~--~-l~--~~t~lv~~-~~~e~~tG~~~~~-----i---~~-~~~~~~vD~~q~-~g~~~id------ 181 (361)
T 3m5u_A 124 SEESNFDHIPRV--E-FS--DNADYAYI-CSNNTIYGTQYQN-----Y---PK-TKTPLIVDASSD-FFSRKVD------ 181 (361)
T ss_dssp CTTTTSCSCCCC--C-CC--TTSSEEEE-ESEETTTTEECSS-----C---CC-CSSCEEEECGGG-TTSSCCC------
T ss_pred ccCcCCCcCChh--h-cC--CCCCEEEE-eCCCCCcceeCCc-----c---cc-cCCEEEEEcccc-cCCCCCC------
Confidence 322112145555 3 54 23344444 5556777998762 2 33 499999997543 3211111
Q ss_pred HHhhhcCCeEEEEecccccccccccccceeEeeeCCHHHHHHH
Q 047180 254 RIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSVLCEDEKQAVAV 296 (337)
Q Consensus 254 ~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~~~~~~~~~ 296 (337)
+.. -. +++.|-=|.+|.+| +|++++ +++.++++
T Consensus 182 --~~~--~d-~~~~s~~K~~gp~G--~g~l~~---~~~~~~~~ 214 (361)
T 3m5u_A 182 --FSN--IA-LFYGGVQKNAGISG--LSCIFI---RKDMLERS 214 (361)
T ss_dssp --CTT--EE-EEEEETTTTSSCTT--CEEEEE---EHHHHHHH
T ss_pred --ccc--CC-EEEEechhccCCCc--cEEEEE---cHHHHhhh
Confidence 111 13 45567789999877 677776 34444443
No 234
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=97.80 E-value=3.3e-05 Score=80.16 Aligned_cols=127 Identities=13% Similarity=0.139 Sum_probs=73.7
Q ss_pred HHHHHHHHc-----CCCCeEEEEeCCC--CCCCCCCC-CHHHHHHHHHHHHhcCceeEEcccCCCCCC-CCCccchHHHH
Q 047180 184 AALMDDIKN-----APNGSFFLLHACA--HNPTGVDP-SEEQWKEISYQIKAKGHFPFFDMAYQGFAS-GDPERDAKAIR 254 (337)
Q Consensus 184 ~~l~~~l~~-----~~~~~~ili~~~p--~NPTG~~~-s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~-~~~~~~~~~~~ 254 (337)
+.+++.+++ .+.+...++ .-| ++-.|... +++.+++|.++|++||+++|.||++.+|.. |.. ....
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi-~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~----fa~e 651 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALI-IEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVE----TTTE 651 (831)
T ss_dssp HHHHHHC---------CEEEEEE-ECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBS----STHH
T ss_pred HHHHHHHHhhhhhcCCCcEEEEE-EecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCc----hhhH
Confidence 456666542 123334444 345 68888765 889999999999999999999999998842 211 1111
Q ss_pred HhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHHH--h-hhcccccCCChhHHHHHHHHhC
Q 047180 255 IFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQ--Q-LARPMYSNPPVHGALIVSTILG 324 (337)
Q Consensus 255 ~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~--~-~~~~~~~~~~~~~q~~~~~~l~ 324 (337)
.+ ...++++ +|||.++ .| +++|++++ ++++.+.+...-. . ....+++ .+.+++.++.+.|+
T Consensus 652 ~~-gv~PDii---tlsK~L~-gG~~Plgav~~---~~~i~~~~~~~~~~~~~~hg~T~~-g~Pla~Aaala~L~ 716 (831)
T 4a0g_A 652 LL-GCKPDIA---CFAKLLT-GGMVPLAVTLA---TDAVFDSFSGDSKLKALLHGHSYS-AHAMGCATAAKAIQ 716 (831)
T ss_dssp HH-SSCCSEE---EECGGGG-TTSSCCEEEEE---CHHHHHTTCSSCGGGSCCCCCTTT-TCHHHHHHHHHHHH
T ss_pred hc-CCCCcEE---EEecccc-cCccCcEEEEE---CHHHHHHHhcccccccceeecCCc-ccHHHHHHHHHHHH
Confidence 12 2223443 5899998 47 79999986 4544443321000 0 0122333 34566666655553
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=97.65 E-value=0.0019 Score=62.62 Aligned_cols=191 Identities=13% Similarity=0.106 Sum_probs=105.8
Q ss_pred EEeeccchhHHHHHHHHHhhh-----CCC-CeEEEcCCCCcchHH-HHHhcCce-----------eeEeeecc---CCCC
Q 047180 121 AVQSLSGTGACRLFADFQKRF-----HPD-SQIYIPVPTWSNHHN-IWRDAHVT-----------QRTFHYYH---PGTK 179 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~-----~pg-d~Vlv~~P~y~~y~~-~~~~~G~~-----------~~~~~~~~---~~~~ 179 (337)
+..+++|++|...++.+.... .++ .+|+...=+|.+... .+...|.. .+.++... ....
T Consensus 131 v~f~~sGsEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 210 (473)
T 4e3q_A 131 VFYTNSGSEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEE 210 (473)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCT
T ss_pred EEEeCchHHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccc
Confidence 578999999999988654321 133 578888888887533 33333321 11221100 0001
Q ss_pred CCC--------hHHHHHHHHcC-CCCeEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhcCceeEEcccCCCCC-CCCCcc
Q 047180 180 GLD--------FAALMDDIKNA-PNGSFFLLHACAHNPTGV-DPSEEQWKEISYQIKAKGHFPFFDMAYQGFA-SGDPER 248 (337)
Q Consensus 180 ~~d--------~~~l~~~l~~~-~~~~~ili~~~p~NPTG~-~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~-~~~~~~ 248 (337)
.-. .+++++.+... +.....++.-.-+.=.|. ..+++-|++|.++|+++|+++|.||+..+|. .+.+
T Consensus 211 ~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~-- 288 (473)
T 4e3q_A 211 GETEEQFVARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNT-- 288 (473)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSS--
T ss_pred cchhhHHHHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccch--
Confidence 111 23344444332 223344443333444554 4678899999999999999999999999883 2211
Q ss_pred chHHHHHhhhcCCeEEEEecccccccccc-cccceeEeeeCCHHHHHHHHHHHHhh----hcccccCCChhHHHHHHHHh
Q 047180 249 DAKAIRIFLKDGHLLGLAQSYAKNMGLYG-QRVGCLSVLCEDEKQAVAVKSQLQQL----ARPMYSNPPVHGALIVSTIL 323 (337)
Q Consensus 249 ~~~~~~~~~~~~~~~i~~~S~SK~~~~~G-~RvG~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~q~~~~~~l 323 (337)
.....+ ...+++++ ++|.++ .| +-+|.+++ .+++.+.+....... ...++++ +.++..++...|
T Consensus 289 --fa~e~~-gv~PDi~t---~~K~l~-gG~~Pl~av~~---~~~i~~~~~~~~~~~~~~~hg~T~~G-npla~Aaala~L 357 (473)
T 4e3q_A 289 --WGCVTY-DFTPDAII---SSKNLT-AGFFPMGAVIL---GPELSKRLETAIEAIEEFPHGFTASG-HPVGCAIALKAI 357 (473)
T ss_dssp --CHHHHT-TCCCSEEE---ECGGGG-TTSSCCEEEEE---CHHHHHHHHHHHHHHSCCCCCCTTTT-CHHHHHHHHHHH
T ss_pred --hHHHhc-CCCCChHH---hccccc-CCCCCcccccc---cHHHHHHhccccccccccccCCCCCC-Ccchhhhhhhhh
Confidence 111111 22245543 689998 46 89999875 566666665433221 1234443 344555554444
Q ss_pred C
Q 047180 324 G 324 (337)
Q Consensus 324 ~ 324 (337)
+
T Consensus 358 ~ 358 (473)
T 4e3q_A 358 D 358 (473)
T ss_dssp H
T ss_pred h
Confidence 3
No 236
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=97.60 E-value=0.00026 Score=67.67 Aligned_cols=194 Identities=13% Similarity=0.099 Sum_probs=102.1
Q ss_pred cccchHHHHHHHHh-cCcCCCCCCCC---CCC------HHHHHHHHHHHhCCCCcccccCceeEEeeccchhHHHHHHHH
Q 047180 68 PVVLECVREAERRI-AGTANMEYLPM---GGS------VKMVEETLKLAYGDNSEFIKDKRIAAVQSLSGTGACRLFADF 137 (337)
Q Consensus 68 ~~~~~~v~~a~~~~-~~~~~~~Y~~~---~G~------~~lr~aia~~~~~~~~~~~~~~~i~~~~t~g~~~al~~~~~~ 137 (337)
-++.++|.+|.-.. .....-+|+-. .|. +.|-..-|..+|+-.. ....| .++..+|+.|-..+..+
T Consensus 64 N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a~~---A~w~V-NVQP~SGs~AN~avy~A 139 (490)
T 3ou5_A 64 NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDLDP---AQWGV-NVQPYSGSPANLAVYTA 139 (490)
T ss_dssp CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTCCT---TTEEE-ECCCSSHHHHHHHHHHH
T ss_pred CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCCCc---cccCC-CCCcCCHHHHHHHHHHH
Confidence 35778888887653 22223344321 132 1122222334555431 11112 25778888888777777
Q ss_pred HhhhCCCCeEEEcCCCCcchHHH--------HHhcCc--eeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 138 QKRFHPDSQIYIPVPTWSNHHNI--------WRDAHV--TQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 138 l~~~~pgd~Vlv~~P~y~~y~~~--------~~~~G~--~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
|.+ |||+|+-.+..-.++... +...|. +.++|++ ++++..+|.|++++.....+ .++|++ .--.+
T Consensus 140 ll~--PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~v-d~~t~~IDyd~~~~~A~~~k-PklIi~-G~SaY 214 (490)
T 3ou5_A 140 LLQ--PHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL-NPKTGLIDYNQLALTARLFR-PRLIIA-GTSAY 214 (490)
T ss_dssp HCC---CCCEECBC----------------------------CBCE-ETTTTEECHHHHHHHHHHHC-CSEEEE-CCSSC
T ss_pred HcC--CCCEEEecccCCCCcccccccCCCccccccccccccccccc-CCCCCcccHHHHHHHHhhcC-CCeEEE-CCccC
Confidence 777 999999999988877532 122332 4666666 44567899999998776543 345554 43334
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcccCC-CCCCCCCccchHHHHHhhhcCCeEEEEecccccccccccccceeEe
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQ-GFASGDPERDAKAIRIFLKDGHLLGLAQSYAKNMGLYGQRVGCLSV 285 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~ 285 (337)
|-=. +++++.++|.+-|.+++.|.++. +|+.+....+ |+. .-+ |+..|-=|++. |=|-|.+..
T Consensus 215 ~r~i-----d~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~ps--P~~-----~AD-vVTtTTHKTLr--GPrGG~Il~ 278 (490)
T 3ou5_A 215 ARLI-----DYARMREVCDEVKAHLLADMAHISGLVAAKVIPS--PFK-----HAD-IVTTTTHKTLR--GARSGLIFY 278 (490)
T ss_dssp CSCC-----CHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCC--GGG-----TCS-EEEEESSSTTC--SCSCEEEEE
T ss_pred cccc-----CHHHHHHHHhhcccEEEechhhhhhhhcccccCC--ccc-----cce-EEecccccccc--CCCceEEEe
Confidence 4322 47778888889999999999873 3432211111 121 123 44566679884 889888775
No 237
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=77.78 E-value=23 Score=34.34 Aligned_cols=69 Identities=10% Similarity=0.046 Sum_probs=40.7
Q ss_pred HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 159 NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 159 ~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
..+...+.+...+.+.+.+.|.+..+.+-+ ++...... . -..+.|-.||++|+++|++.|++++|-||=
T Consensus 206 d~mA~~KlN~lH~HltDdqgwriei~~~P~-Lt~~Ga~~-----~-~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 206 DLASQYKINKFHMHLSDDQGWRIEIKSWPD-LIEIGSKG-----Q-VGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHHTTTCCEEEEECBCSSCBCBCCTTSTH-HHHTTTSC-----C-TTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHcCCcEEEEEeccCCccccccccchh-hhhccCcc-----c-cCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 344455566666666554445554443333 22111100 0 012346789999999999999999998886
No 238
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=76.96 E-value=19 Score=34.74 Aligned_cols=26 Identities=15% Similarity=0.031 Sum_probs=23.7
Q ss_pred CCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 209 TGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
.|-.||++++++|++.|++++|-||-
T Consensus 224 ~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 224 PGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp CCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 36789999999999999999998885
No 239
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=76.10 E-value=11 Score=33.16 Aligned_cols=95 Identities=11% Similarity=-0.020 Sum_probs=54.5
Q ss_pred eeccchhHHHH-HHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---CCCCeE
Q 047180 123 QSLSGTGACRL-FADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---APNGSF 198 (337)
Q Consensus 123 ~t~g~~~al~~-~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~~ 198 (337)
+++|++++|-. ++..|.+ .|-.|++.+=.-......++..|.++..+..+ --|.+.+++.+++ .-.+--
T Consensus 33 lVTGas~GIG~aiA~~la~--~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~D-----v~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 33 VITGATSGIGLAAAKRFVA--EGARVFITGRRKDVLDAAIAEIGGGAVGIQAD-----SANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp EEESCSSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCTTCEEEECC-----TTCHHHHHHHHHHHHHHHSCEE
T ss_pred EEeCcCCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHcCCCeEEEEec-----CCCHHHHHHHHHHHHHHcCCCC
Confidence 44455544443 3455556 78888887654444455666778887777652 2244444443332 112233
Q ss_pred EEEeCCCCCCCCC--CCCHHHHHHHHHH
Q 047180 199 FLLHACAHNPTGV--DPSEEQWKEISYQ 224 (337)
Q Consensus 199 ili~~~p~NPTG~--~~s~~~~~~l~~~ 224 (337)
+++||---++.+- .++.++|++++++
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~v 133 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDR 133 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHH
Confidence 6666554444443 3789999999884
No 240
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=75.97 E-value=11 Score=36.31 Aligned_cols=25 Identities=4% Similarity=-0.114 Sum_probs=23.0
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
|-.||++|+++|++.|++++|-||=
T Consensus 214 ~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 214 SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 6789999999999999999998885
No 241
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=72.63 E-value=29 Score=28.83 Aligned_cols=94 Identities=7% Similarity=-0.040 Sum_probs=50.5
Q ss_pred eeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEE
Q 047180 123 QSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLL 201 (337)
Q Consensus 123 ~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili 201 (337)
++.||++++-.. +..|.+ .|..|++.+-.-.......+..+.++..+.. .--|.+.+++.+.......-+++
T Consensus 5 lVTGas~gIG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----D~~~~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 5 VITGASSGLGAELAKLYDA--EGKATYLTGRSESKLSTVTNCLSNNVGYRAR-----DLASHQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp EEESTTSHHHHHHHHHHHH--TTCCEEEEESCHHHHHHHHHTCSSCCCEEEC-----CTTCHHHHHHHHHSCSSCCSEEE
T ss_pred EEecCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHhhccCeEee-----cCCCHHHHHHHHHHHhhcCCEEE
Confidence 445555554433 344445 5877877765544444555555555555544 12356777777765322213455
Q ss_pred eCCCCCCCCC--CCCHHHHHHHHH
Q 047180 202 HACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 202 ~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
+|-...+.+. ..+.++|++..+
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~ 101 (230)
T 3guy_A 78 HSAGSGYFGLLQEQDPEQIQTLIE 101 (230)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred EeCCcCCCCccccCCHHHHHHHHH
Confidence 4433333333 367788877655
No 242
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=63.93 E-value=9.6 Score=36.84 Aligned_cols=27 Identities=15% Similarity=0.068 Sum_probs=24.2
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
|.|-.||++|+++|++.|++++|-||=
T Consensus 207 ~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 207 PVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp TTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 556789999999999999999998885
No 243
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=61.43 E-value=6.5 Score=37.33 Aligned_cols=29 Identities=17% Similarity=0.135 Sum_probs=26.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
++|.|-.||++++++|++.|++++|-||=
T Consensus 85 ~~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 85 DDPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CCTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred cCCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 46778899999999999999999998885
No 244
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=60.77 E-value=16 Score=31.90 Aligned_cols=79 Identities=10% Similarity=0.017 Sum_probs=52.8
Q ss_pred eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 146 QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 146 ~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
-|+...+.|.+....++.. .+.+.+|+... +|-+|.-++.++-.. .. ..++++. .+++.++++++.+.|
T Consensus 81 SVLTd~~~F~Gs~~~L~~v-r~~v~lPvLrK-DFiid~yQI~eAr~~-GA-DaILLI~-------a~L~~~~l~~l~~~A 149 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKI-ASSVSIPILMS-DFIVKESQIDDAYNL-GA-DTVLLIV-------KILTERELESLLEYA 149 (258)
T ss_dssp EEECCSTTTCCCHHHHHHH-HTTCSSCEEEE-SCCCSHHHHHHHHHH-TC-SEEEEEG-------GGSCHHHHHHHHHHH
T ss_pred EEeCCCCCCCCCHHHHHHH-HHhcCCCEeec-cccccHHHHHHHHHc-CC-CeeehHH-------hhcCHHHHHHHHHHH
Confidence 4555566676665555543 23355676543 699998888776442 23 3444444 458999999999999
Q ss_pred HhcCceeEEc
Q 047180 226 KAKGHFPFFD 235 (337)
Q Consensus 226 ~~~~~~ii~D 235 (337)
.+.|+-+++.
T Consensus 150 ~~lGl~~LvE 159 (258)
T 4a29_A 150 RSYGMEPLIL 159 (258)
T ss_dssp HHTTCCCEEE
T ss_pred HHHhHHHHHh
Confidence 9999887773
No 245
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=59.10 E-value=56 Score=24.73 Aligned_cols=103 Identities=13% Similarity=0.064 Sum_probs=59.8
Q ss_pred EEeeccchhHHHHHHHHHhhhC---CCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCe
Q 047180 121 AVQSLSGTGACRLFADFQKRFH---PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGS 197 (337)
Q Consensus 121 ~~~t~g~~~al~~~~~~l~~~~---pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 197 (337)
++....+.+.+.+++-.+.... .+..|+...|.+..|...+...|.....+-+....+..-.+..+++++.. ...
T Consensus 7 ll~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrs--g~~ 84 (119)
T 1ofu_X 7 LSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRL--GRS 84 (119)
T ss_dssp EEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHH--TCE
T ss_pred EeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhc--CCc
Confidence 3444445555666665555543 34567777777888999999999764443332221111124667777764 222
Q ss_pred EEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCce
Q 047180 198 FFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHF 231 (337)
Q Consensus 198 ~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ 231 (337)
-.|+ .-+. .++..+.++|---|++-+..
T Consensus 85 ~aVl-~wl~-----~l~~~~~RRLqlAA~~g~~~ 112 (119)
T 1ofu_X 85 HTVV-SWLE-----PLSRAARKQLSRAAQLGQAQ 112 (119)
T ss_dssp EEEE-ECCS-----SCCHHHHHHHHHHHHHHTCE
T ss_pred cEEE-ECCC-----cCChHHHHHHHHHHHhCCCe
Confidence 3333 3222 37888888887777765543
No 246
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=58.73 E-value=19 Score=31.34 Aligned_cols=80 Identities=15% Similarity=0.028 Sum_probs=47.5
Q ss_pred eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 146 QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 146 ~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
.|+.....|.+-...++..- +.+.+|+... +|.+|.-.+.++.. .. ...++++.. .++.++++++++.|
T Consensus 78 sVlTd~~~F~gs~~dL~~ir-~~v~lPvLrK-Dfi~~~~qi~ea~~-~G-AD~ilLi~a-------~l~~~~l~~l~~~a 146 (251)
T 1i4n_A 78 SILTEKHYFKGDPAFVRAAR-NLTCRPILAK-DFYIDTVQVKLASS-VG-ADAILIIAR-------ILTAEQIKEIYEAA 146 (251)
T ss_dssp EEECCCSSSCCCTHHHHHHH-TTCCSCEEEE-CCCCSTHHHHHHHH-TT-CSEEEEEGG-------GSCHHHHHHHHHHH
T ss_pred EEEecccccCCCHHHHHHHH-HhCCCCEEEe-eCCCCHHHHHHHHH-cC-CCEEEEecc-------cCCHHHHHHHHHHH
Confidence 44555555544333333221 1245565433 57777766666443 23 345555443 47788999999999
Q ss_pred HhcCceeEEcc
Q 047180 226 KAKGHFPFFDM 236 (337)
Q Consensus 226 ~~~~~~ii~De 236 (337)
++.|+.++.|-
T Consensus 147 ~~lGl~~lvEv 157 (251)
T 1i4n_A 147 EELGMDSLVEV 157 (251)
T ss_dssp HTTTCEEEEEE
T ss_pred HHcCCeEEEEe
Confidence 99998888873
No 247
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=57.39 E-value=23 Score=36.51 Aligned_cols=27 Identities=15% Similarity=-0.075 Sum_probs=23.9
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
|.|-.||++++++|++.|++++|-||=
T Consensus 392 ~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 392 VYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp CEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred ccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 456789999999999999999988875
No 248
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=56.89 E-value=63 Score=27.85 Aligned_cols=95 Identities=6% Similarity=-0.031 Sum_probs=51.1
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchH---HHHHhcCceeeEeeeccCCCCCCChHHHHHHHH---cCC
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHH---NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIK---NAP 194 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~---~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~ 194 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-.... ..++..|.++..+.++ --|.+.+++.++ +.-
T Consensus 12 alVTGas~GIG~aia~~la~--~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~D-----v~~~~~v~~~~~~~~~~~ 84 (255)
T 4g81_D 12 ALVTGSARGLGFAYAEGLAA--AGARVILNDIRATLLAESVDTLTRKGYDAHGVAFD-----VTDELAIEAAFSKLDAEG 84 (255)
T ss_dssp EEETTCSSHHHHHHHHHHHH--TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCC-----TTCHHHHHHHHHHHHHTT
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEee-----CCCHHHHHHHHHHHHHHC
Confidence 3445555554433 455566 7988988764332222 2334567777766552 224444444333 221
Q ss_pred CCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 195 NGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.+--+++||---++.+- .++.++|+++.+
T Consensus 85 G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~ 115 (255)
T 4g81_D 85 IHVDILINNAGIQYRKPMVELELENWQKVID 115 (255)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 22335665544444444 378999998877
No 249
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=56.38 E-value=6.9 Score=37.02 Aligned_cols=29 Identities=24% Similarity=0.244 Sum_probs=25.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 206 HNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 206 ~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
++|.|-.||++++++|++.|++++|-||=
T Consensus 82 ~~~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 82 NDPNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp CCTTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 45678899999999999999999998885
No 250
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=55.23 E-value=93 Score=26.51 Aligned_cols=95 Identities=5% Similarity=-0.050 Sum_probs=48.8
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++||++++-.. +..|.+ .|..|++.+-.-.......+..+.++..+.++ --|.+.+.+.+... -.+.
T Consensus 8 vlVTGas~gIG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 8 WLVTGASSGFGRAIAEAAVA--AGDTVIGTARRTEALDDLVAAYPDRAEAISLD-----VTDGERIDVVAADVLARYGRV 80 (281)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEEESSGGGGHHHHHHCTTTEEEEECC-----TTCHHHHHHHHHHHHHHHSCC
T ss_pred EEEECCCChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHhccCCceEEEee-----CCCHHHHHHHHHHHHHhCCCC
Confidence 4555666555433 344445 68888877666556666666666666555541 22455555544321 0112
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|-...+.+. ..+.++|++..+
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 81 DVLVNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp SEEEECCCCEEECCTTTCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 24554433222222 467777765544
No 251
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=54.91 E-value=51 Score=28.52 Aligned_cols=93 Identities=9% Similarity=-0.003 Sum_probs=48.6
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEE
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFL 200 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~il 200 (337)
++++||+++|-.. +..|.+ .|-.|++.+-.-.......+..+.++..+.+ .--|.+.+.+.+++.. +.-++
T Consensus 19 vlVTGas~gIG~~~a~~L~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----Dl~d~~~v~~~~~~~~-~iD~l 90 (291)
T 3rd5_A 19 VVITGANSGLGAVTARELAR--RGATVIMAVRDTRKGEAAARTMAGQVEVREL-----DLQDLSSVRRFADGVS-GADVL 90 (291)
T ss_dssp EEEECCSSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHTTSSSEEEEEEC-----CTTCHHHHHHHHHTCC-CEEEE
T ss_pred EEEeCCCChHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHhcCCeeEEEc-----CCCCHHHHHHHHHhcC-CCCEE
Confidence 3455665554433 344555 6878887664434444445555666666554 1236778877776542 33455
Q ss_pred EeCCCCCCCCCCCCHHHHHHHH
Q 047180 201 LHACAHNPTGVDPSEEQWKEIS 222 (337)
Q Consensus 201 i~~~p~NPTG~~~s~~~~~~l~ 222 (337)
++|--........+.+++++..
T Consensus 91 v~nAg~~~~~~~~~~~~~~~~~ 112 (291)
T 3rd5_A 91 INNAGIMAVPYALTVDGFESQI 112 (291)
T ss_dssp EECCCCCSCCCCBCTTSCBHHH
T ss_pred EECCcCCCCcccCCHHHHHHHH
Confidence 5443222223344555555443
No 252
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=53.56 E-value=42 Score=28.36 Aligned_cols=95 Identities=9% Similarity=0.001 Sum_probs=49.8
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-.......+..|.++..+.++ --|.+.+++.++.. -.+.
T Consensus 9 vlVTGas~gIG~a~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~i 81 (247)
T 3rwb_A 9 ALVTGAAQGIGKAIAARLAA--DGATVIVSDINAEGAKAAAASIGKKARAIAAD-----ISDPGSVKALFAEIQALTGGI 81 (247)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHHHCTTEEECCCC-----TTCHHHHHHHHHHHHHHHSCC
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCceEEEEcC-----CCCHHHHHHHHHHHHHHCCCC
Confidence 3455555554433 345555 68888887655444445555556666665541 22455555544321 0112
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|--..+.+. ..+.++|++..+
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 24554443334333 457888887665
No 253
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=48.87 E-value=20 Score=32.43 Aligned_cols=37 Identities=22% Similarity=0.180 Sum_probs=33.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
.+||.|-....+++.++++.|+++|+-|+.|--|.+.
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~ 85 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDT 85 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSS
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCC
Confidence 3889999999999999999999999999999877665
No 254
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=47.60 E-value=22 Score=32.12 Aligned_cols=74 Identities=14% Similarity=0.114 Sum_probs=48.7
Q ss_pred HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEccc
Q 047180 158 HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMA 237 (337)
Q Consensus 158 ~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~ 237 (337)
....+..|.+.. +.++..-+.-.+.+.+-- ....+-+ -+||.|-..+.+...++++.|+++|+-|+.|--
T Consensus 12 ~~~~e~~g~~~~-----~~~G~~~~~~~ilk~~G~--n~vRlri---~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~h 81 (334)
T 1fob_A 12 LLLLEDEGYSYK-----NLNGQTQALETILADAGI--NSIRQRV---WVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLH 81 (334)
T ss_dssp HHHHHHTTCCCB-----CTTSCBCCHHHHHHHHTC--CEEEEEE---CSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHcCCEEE-----CCCCCCchHHHHHHHcCC--CEEEEEE---EECCCCCccCHHHHHHHHHHHHHCCCEEEEEec
Confidence 345677887642 322233344444443321 1122333 278899999999999999999999999999987
Q ss_pred CCCC
Q 047180 238 YQGF 241 (337)
Q Consensus 238 Y~~~ 241 (337)
|++.
T Consensus 82 ysd~ 85 (334)
T 1fob_A 82 LSDT 85 (334)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 7664
No 255
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=46.94 E-value=1.3e+02 Score=25.47 Aligned_cols=91 Identities=10% Similarity=-0.024 Sum_probs=42.6
Q ss_pred eeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc----CCCCe
Q 047180 123 QSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN----APNGS 197 (337)
Q Consensus 123 ~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~~~~ 197 (337)
+++|++++|-.. +..|.+ .|..|++.+-.-......++..+...+...+ -|.+.+.+.++. ...-.
T Consensus 31 lVTGas~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv-------~~~~~v~~~~~~~~~~~g~iD 101 (260)
T 3gem_A 31 LITGASQRVGLHCALRLLE--HGHRVIISYRTEHASVTELRQAGAVALYGDF-------SCETGIMAFIDLLKTQTSSLR 101 (260)
T ss_dssp EESSTTSHHHHHHHHHHHH--TTCCEEEEESSCCHHHHHHHHHTCEEEECCT-------TSHHHHHHHHHHHHHHCSCCS
T ss_pred EEECCCCHHHHHHHHHHHH--CCCEEEEEeCChHHHHHHHHhcCCeEEECCC-------CCHHHHHHHHHHHHHhcCCCC
Confidence 445665554433 344445 5777776654433334455555644443322 244554444332 11223
Q ss_pred EEEEeCCCC-CCCCCCCCHHHHHHHHH
Q 047180 198 FFLLHACAH-NPTGVDPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~-NPTG~~~s~~~~~~l~~ 223 (337)
++++|--. .+.....+.++|++..+
T Consensus 102 -~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 102 -AVVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp -EEEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred -EEEECCCccCCCCCCCCHHHHHHHHH
Confidence 44433221 22224556677776655
No 256
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=46.55 E-value=54 Score=28.73 Aligned_cols=58 Identities=10% Similarity=0.020 Sum_probs=40.2
Q ss_pred eEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 169 RTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 169 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
+.+|+... +|..|...+.++... .. ..+++.+. .++.++++++.+.|++.|+-++.+-
T Consensus 119 v~lPVl~K-dfi~d~~qi~ea~~~-GA-D~VlLi~a-------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 119 CSLPALRK-DFLFDPYQVYEARSW-GA-DCILIIMA-------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SSSCEEEE-SCCCSTHHHHHHHHT-TC-SEEEEETT-------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCEEEC-CccCCHHHHHHHHHc-CC-CEEEEccc-------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 44555332 577888888776553 33 45555443 5688999999999999998888763
No 257
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=46.09 E-value=1.3e+02 Score=25.48 Aligned_cols=95 Identities=6% Similarity=-0.080 Sum_probs=48.0
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC--CCCeE
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--PNGSF 198 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--~~~~~ 198 (337)
++++|++++|-.. +..|.+ .|..|++.+-.-.......+..+.++..+.++ --|.+.+.+.++.. -.+.-
T Consensus 33 vlVTGas~GIG~aia~~l~~--~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~D-----l~~~~~v~~~~~~~~~~~~id 105 (281)
T 3ppi_A 33 AIVSGGAGGLGEATVRRLHA--DGLGVVIADLAAEKGKALADELGNRAEFVSTN-----VTSEDSVLAAIEAANQLGRLR 105 (281)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCTTEEEEECC-----TTCHHHHHHHHHHHTTSSEEE
T ss_pred EEEECCCChHHHHHHHHHHH--CCCEEEEEeCChHHHHHHHHHhCCceEEEEcC-----CCCHHHHHHHHHHHHHhCCCC
Confidence 3455665554433 344445 68888877654444444555556666666542 22455555544321 11223
Q ss_pred EEEeC-CCCCCCC-------CCCCHHHHHHHHH
Q 047180 199 FLLHA-CAHNPTG-------VDPSEEQWKEISY 223 (337)
Q Consensus 199 ili~~-~p~NPTG-------~~~s~~~~~~l~~ 223 (337)
++++| ....+.+ ...+.++|++..+
T Consensus 106 ~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (281)
T 3ppi_A 106 YAVVAHGGFGVAQRIVQRDGSPADMGGFTKTID 138 (281)
T ss_dssp EEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHH
T ss_pred eEEEccCcccccccccccccccCCHHHHHHHHH
Confidence 44444 2222222 3467777877665
No 258
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=45.98 E-value=1.3e+02 Score=25.09 Aligned_cols=63 Identities=6% Similarity=-0.178 Sum_probs=32.1
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIK 191 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~ 191 (337)
+++.|+++++-.. +..|.+ .|..|++.+-.-.......+..|.++..++.+ --|.+.+.+.+.
T Consensus 15 vlVTGasggiG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~ 78 (265)
T 2o23_A 15 AVITGGASGLGLATAERLVG--QGASAVLLDLPNSGGEAQAKKLGNNCVFAPAD-----VTSEKDVQTALA 78 (265)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEECTTSSHHHHHHHHCTTEEEEECC-----TTCHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHH--CCCEEEEEeCCcHhHHHHHHHhCCceEEEEcC-----CCCHHHHHHHHH
Confidence 3455666555433 344444 57777765444344444445446566555541 124555555443
No 259
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=45.80 E-value=73 Score=26.94 Aligned_cols=94 Identities=11% Similarity=-0.047 Sum_probs=47.9
Q ss_pred eeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---CCCCeE
Q 047180 123 QSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---APNGSF 198 (337)
Q Consensus 123 ~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~~ 198 (337)
+++|+++++-.. +..|.+ .|-.|++.+-.-.......+..|.++..+..+ --|.+.+++.++. .-.+.-
T Consensus 12 lVTGas~gIG~a~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 12 IVIGGTHGMGLATVRRLVE--GGAEVLLTGRNESNIARIREEFGPRVHALRSD-----IADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp EEETCSSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHGGGEEEEECC-----TTCHHHHHHHHHHHHHHHSSEE
T ss_pred EEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCcceEEEcc-----CCCHHHHHHHHHHHHHHhCCCC
Confidence 445555554433 345555 68888877654444444455556666666542 2245555443322 111234
Q ss_pred EEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 199 FLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 199 ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
++++|--..+.+. .++.++|++..+
T Consensus 85 ~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (255)
T 4eso_A 85 LLHINAGVSELEPFDQVSEASYDRQFA 111 (255)
T ss_dssp EEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5664433222222 348888887765
No 260
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=45.16 E-value=32 Score=33.65 Aligned_cols=25 Identities=8% Similarity=-0.132 Sum_probs=22.5
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
|-.||++++++|++.|++++|-||=
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VIP 274 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVLP 274 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCceee
Confidence 5689999999999999999988775
No 261
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=44.92 E-value=1.4e+02 Score=25.08 Aligned_cols=94 Identities=4% Similarity=-0.109 Sum_probs=48.3
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHH---HHhcCceeeEeeeccCCCCCCChHHHHHHHH---cCC
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNI---WRDAHVTQRTFHYYHPGTKGLDFAALMDDIK---NAP 194 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~---~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~---~~~ 194 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-...... ++..|.++..+.++ --|.+.+.+.++ +.
T Consensus 10 vlVTGas~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~- 81 (252)
T 3h7a_A 10 VAVIGAGDYIGAEIAKKFAA--EGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLD-----ARNEDEVTAFLNAADAH- 81 (252)
T ss_dssp EEEECCSSHHHHHHHHHHHH--TTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECC-----TTCHHHHHHHHHHHHHH-
T ss_pred EEEECCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECc-----CCCHHHHHHHHHHHHhh-
Confidence 3445555554433 345555 687887766544443333 33446677766652 124555544433 22
Q ss_pred CCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 195 NGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.+.-++++|--..+.+. ..+.++|++..+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 23345665443333332 367888887655
No 262
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=44.34 E-value=61 Score=27.37 Aligned_cols=95 Identities=5% Similarity=-0.121 Sum_probs=41.0
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|+++++-.. +..|.+ .|-.|++.+-.-.......+..|.++..+..+ --|.+.+++.++.. -.+.
T Consensus 10 ~lVTGas~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~i 82 (257)
T 3tpc_A 10 FIVTGASSGLGAAVTRMLAQ--EGATVLGLDLKPPAGEEPAAELGAAVRFRNAD-----VTNEADATAALAFAKQEFGHV 82 (257)
T ss_dssp EEEESTTSHHHHHHHHHHHH--TTCEEEEEESSCC------------CEEEECC-----TTCHHHHHHHHHHHHHHHSCC
T ss_pred EEEeCCCCHHHHHHHHHHHH--CCCEEEEEeCChHHHHHHHHHhCCceEEEEcc-----CCCHHHHHHHHHHHHHHcCCC
Confidence 3455555554433 344555 68788776554444444444455555555441 22455555544321 0122
Q ss_pred EEEEeCCCCCCCCC------CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV------DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~------~~s~~~~~~l~~ 223 (337)
-++++|--..+.+. ..+.++|++..+
T Consensus 83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp CEEEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccccccCCHHHHHHHHH
Confidence 34554433333222 367788887655
No 263
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=43.88 E-value=61 Score=27.95 Aligned_cols=95 Identities=7% Similarity=-0.057 Sum_probs=47.3
Q ss_pred EeeccchhHHHH-HHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRL-FADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~-~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|++++|-. ++..|.+ .|-.|++.+-.-.......+..|.++..+.++ --|.+.+++.++.. -.+.
T Consensus 32 vlVTGas~gIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 32 AIVTGAGAGIGLAVARRLAD--EGCHVLCADIDGDAADAAATKIGCGAAACRVD-----VSDEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp EEETTTTSTHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHCSSCEEEECC-----TTCHHHHHHHHHHHHHHHSSC
T ss_pred EEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHcCCcceEEEec-----CCCHHHHHHHHHHHHHHcCCC
Confidence 344555544433 3344555 68888877654444444555556666655542 12455554444321 0122
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|--..+.+. ..+.++|++..+
T Consensus 105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 105 DKLVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 34554433332222 467888887654
No 264
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=43.51 E-value=41 Score=31.88 Aligned_cols=79 Identities=6% Similarity=-0.061 Sum_probs=49.5
Q ss_pred eEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHH
Q 047180 146 QIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQI 225 (337)
Q Consensus 146 ~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~ 225 (337)
.|+...+.|.+-...++..- +.+.+|+... +|.+|.-.+.++.. .. ..+++++.. .++.++++++.+.|
T Consensus 85 svLTd~~~F~gs~~dL~~vr-~~v~lPvLrK-DFI~d~~Qi~ea~~-~G-AD~ILLi~a-------~l~~~~l~~l~~~a 153 (452)
T 1pii_A 85 SVLTDEKYFQGSFNFLPIVS-QIAPQPILCK-DFIIDPYQIYLARY-YQ-ADACLLMLS-------VLDDDQYRQLAAVA 153 (452)
T ss_dssp EEECCSTTTCCCTTHHHHHH-HHCCSCEEEE-SCCCSHHHHHHHHH-TT-CSEEEEETT-------TCCHHHHHHHHHHH
T ss_pred EEEecccccCCCHHHHHHHH-HhcCCCeEEE-eccCCHHHHHHHHH-cC-CCEEEEEcc-------cCCHHHHHHHHHHH
Confidence 44455555544333332221 2235565443 58888877776443 33 345565553 47789999999999
Q ss_pred HhcCceeEEc
Q 047180 226 KAKGHFPFFD 235 (337)
Q Consensus 226 ~~~~~~ii~D 235 (337)
++.|+.++.|
T Consensus 154 ~~lgm~~LvE 163 (452)
T 1pii_A 154 HSLEMGVLTE 163 (452)
T ss_dssp HHTTCEEEEE
T ss_pred HHcCCeEEEE
Confidence 9999998887
No 265
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=43.11 E-value=15 Score=37.05 Aligned_cols=35 Identities=23% Similarity=0.410 Sum_probs=28.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 205 AHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 205 p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+|++ +.++++++++-|.++||-||.|-+|....
T Consensus 247 ~~~~~~---~~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 247 PKNPEK---RIAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp TTSTTH---HHHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred CCCccc---hHHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 445544 47999999999999999999999987553
No 266
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=42.97 E-value=1.1e+02 Score=26.19 Aligned_cols=91 Identities=9% Similarity=-0.041 Sum_probs=49.2
Q ss_pred eeccchhHHHH-HHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEE
Q 047180 123 QSLSGTGACRL-FADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLL 201 (337)
Q Consensus 123 ~t~g~~~al~~-~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili 201 (337)
+++|++++|-. ++..|.+ .|-.|++.+-.-.. .-+..+.++..+.++ --|.+.+++.+++..+ --+++
T Consensus 15 lVTGas~GIG~aia~~la~--~Ga~Vv~~~~~~~~---~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~g~-iDiLV 83 (242)
T 4b79_A 15 LVTGGSSGIGAAIAMQFAE--LGAEVVALGLDADG---VHAPRHPRIRREELD-----ITDSQRLQRLFEALPR-LDVLV 83 (242)
T ss_dssp EEETTTSHHHHHHHHHHHH--TTCEEEEEESSTTS---TTSCCCTTEEEEECC-----TTCHHHHHHHHHHCSC-CSEEE
T ss_pred EEeCCCCHHHHHHHHHHHH--CCCEEEEEeCCHHH---HhhhhcCCeEEEEec-----CCCHHHHHHHHHhcCC-CCEEE
Confidence 44455444443 3455666 68888876532211 112334455555441 2356777776665432 22566
Q ss_pred eCCCCCCCCCCCCHHHHHHHHHH
Q 047180 202 HACAHNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 202 ~~~p~NPTG~~~s~~~~~~l~~~ 224 (337)
||---++....++.++|++++++
T Consensus 84 NNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 84 NNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp ECCCCCCGGGGGSHHHHHHHHHH
T ss_pred ECCCCCCCcccCCHHHHHHHHHH
Confidence 55433444456788999988773
No 267
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=42.83 E-value=73 Score=27.42 Aligned_cols=95 Identities=8% Similarity=-0.072 Sum_probs=50.2
Q ss_pred eeccchhHHHH-HHHHHhhhCCCCeEEEcCCCCcchH---HHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---CCC
Q 047180 123 QSLSGTGACRL-FADFQKRFHPDSQIYIPVPTWSNHH---NIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---APN 195 (337)
Q Consensus 123 ~t~g~~~al~~-~~~~l~~~~pgd~Vlv~~P~y~~y~---~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~ 195 (337)
+++|++.+|-. ++..|.+ .|-.|++.+-.-.... ..++..|.++..+..+ --|.+.+++.+++ .-.
T Consensus 11 lVTGas~GIG~aiA~~la~--~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~D-----vt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 11 IVTGAGSGIGRAIAKKFAL--NDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKAD-----VSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp EEETTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC-----TTSHHHHHHHHHHHHHHHS
T ss_pred EEeCCCCHHHHHHHHHHHH--cCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHHcC
Confidence 44455544443 3455555 6888888654322222 2344568888777652 2244554443332 111
Q ss_pred CeEEEEeCCC-CCCCCC--CCCHHHHHHHHHH
Q 047180 196 GSFFLLHACA-HNPTGV--DPSEEQWKEISYQ 224 (337)
Q Consensus 196 ~~~ili~~~p-~NPTG~--~~s~~~~~~l~~~ 224 (337)
+--+++||-- ..+.+. .++.++|++++++
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 2235665433 234442 4799999988773
No 268
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=42.11 E-value=1.6e+02 Score=25.07 Aligned_cols=95 Identities=8% Similarity=-0.063 Sum_probs=47.5
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-.......+..+.++..+.++ --|.+.+.+.++.. -.+.
T Consensus 31 ~lVTGas~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 31 AIVTGAGSGVGRAVAVALAG--AGYGVALAGRRLDALQETAAEIGDDALCVPTD-----VTDPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHTSCCEEEECC-----TTSHHHHHHHHHHHHHHHSCC
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHhCCCeEEEEec-----CCCHHHHHHHHHHHHHHcCCC
Confidence 4556666555443 344555 68888876654444445555556565555541 12455555544321 0122
Q ss_pred EEEEeCCCC-CCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAH-NPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~-NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|--- .|.+. .++.++|++..+
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 245543222 12222 367888887654
No 269
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=40.82 E-value=1.2e+02 Score=26.13 Aligned_cols=95 Identities=8% Similarity=-0.031 Sum_probs=48.3
Q ss_pred EeeccchhHHHH-HHHHHhhhCCCCeEEEcCCCCcc--hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc----CC
Q 047180 122 VQSLSGTGACRL-FADFQKRFHPDSQIYIPVPTWSN--HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN----AP 194 (337)
Q Consensus 122 ~~t~g~~~al~~-~~~~l~~~~pgd~Vlv~~P~y~~--y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~----~~ 194 (337)
++++|++++|-. ++..|.+ .|-.|++.+=.-.. ....++..|.++..++++- -|.+.+++.+++ ..
T Consensus 10 alVTGas~GIG~aia~~la~--~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv-----~~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 10 VIVTGGASGIGGAISMRLAE--ERAIPVVFARHAPDGAFLDALAQRQPRATYLPVEL-----QDDAQCRDAVAQTIATFG 82 (258)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCT-----TCHHHHHHHHHHHHHHHS
T ss_pred EEEeCCCCHHHHHHHHHHHH--cCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeec-----CCHHHHHHHHHHHHHHhC
Confidence 344555555433 3455555 68777665432222 2233445677777766521 244444433322 12
Q ss_pred CCeEEEEeCCC-CCCCCCCCCHHHHHHHHHH
Q 047180 195 NGSFFLLHACA-HNPTGVDPSEEQWKEISYQ 224 (337)
Q Consensus 195 ~~~~ili~~~p-~NPTG~~~s~~~~~~l~~~ 224 (337)
. --+++||-- +.+.....+.++|++.+++
T Consensus 83 ~-iDiLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 83 R-LDGLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp C-CCEEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred C-CCEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 2 224554322 3344556889999988774
No 270
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=39.43 E-value=74 Score=27.69 Aligned_cols=19 Identities=0% Similarity=-0.181 Sum_probs=14.7
Q ss_pred chHHHHHhcCceeeEeeec
Q 047180 156 NHHNIWRDAHVTQRTFHYY 174 (337)
Q Consensus 156 ~y~~~~~~~G~~~~~~~~~ 174 (337)
.....++..|+..+.+|+.
T Consensus 36 ~~~~~lk~~G~N~VRi~~~ 54 (302)
T 1bqc_A 36 QAFADIKSHGANTVRVVLS 54 (302)
T ss_dssp THHHHHHHTTCSEEEEEEC
T ss_pred HHHHHHHHcCCCEEEEEcc
Confidence 3455677899999999974
No 271
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=39.15 E-value=70 Score=26.67 Aligned_cols=95 Identities=7% Similarity=-0.143 Sum_probs=45.0
Q ss_pred EeeccchhHHHHHH-HHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLFA-DFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~~-~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|++++|-..+ ..|.+ .|..|++.+-.-.......+..+.++..+..+ --|.+.+++.++.. -.+.
T Consensus 6 vlVTGas~GIG~a~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 6 IIVTGAGSGLGRALTIGLVE--RGHQVSMMGRRYQRLQQQELLLGNAVIGIVAD-----LAHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp EEEESTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHGGGEEEEECC-----TTSHHHHHHHHHHHHHHHCSC
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHhcCCceEEECC-----CCCHHHHHHHHHHHHHhcCCC
Confidence 34556655554433 44445 68888877654444444444444445555441 12445554444321 0112
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|--..+.+. .++.++|++..+
T Consensus 79 d~lvnnAg~~~~~~~~~~~~~~~~~~~~ 106 (235)
T 3l6e_A 79 ELVLHCAGTGEFGPVGVYTAEQIRRVME 106 (235)
T ss_dssp SEEEEECCCC------CCCHHHHHHHHH
T ss_pred cEEEECCCCCCCCChHhCCHHHHHHHHH
Confidence 24444433333222 468888887665
No 272
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=39.07 E-value=99 Score=26.41 Aligned_cols=95 Identities=13% Similarity=-0.004 Sum_probs=46.7
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---C
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---P 194 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~ 194 (337)
++++|++++|-.. +..|.+ .|..|++.+-.-..... .++..|.++..+.++ --|.+.+++.+... -
T Consensus 7 ~lVTGas~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 7 ILITGASGGIGEGIARELGV--AGAKILLGARRQARIEAIATEIRDAGGTALAQVLD-----VTDRHSVAAFAQAAVDTW 79 (264)
T ss_dssp EEESSTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred EEEeCCccHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcC-----CCCHHHHHHHHHHHHHHc
Confidence 3455665555433 344455 68778776543322222 233446666666542 22455555444321 0
Q ss_pred CCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 195 NGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.+.-++++|---.+.+. ..+.++|++..+
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 12234554433333332 357888887665
No 273
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=39.02 E-value=73 Score=27.24 Aligned_cols=95 Identities=13% Similarity=0.059 Sum_probs=46.7
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---CCCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---APNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~ 197 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-.......+..|.++..+..+ --|.+.+++.++. .-.+.
T Consensus 30 vlVTGas~gIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~i 102 (266)
T 3grp_A 30 ALVTGATGGIGEAIARCFHA--QGAIVGLHGTREDKLKEIAADLGKDVFVFSAN-----LSDRKSIKQLAEVAEREMEGI 102 (266)
T ss_dssp EEESSTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCSSEEEEECC-----TTSHHHHHHHHHHHHHHHTSC
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCceEEEEee-----cCCHHHHHHHHHHHHHHcCCC
Confidence 3455665554433 345555 68888777654444445555667676666542 2245555544432 10122
Q ss_pred EEEEeCCCCCCCC--CCCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTG--VDPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG--~~~s~~~~~~l~~ 223 (337)
-++++|--..+.+ ...+.++|++..+
T Consensus 103 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 103 DILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp CEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2455443222222 2356677776544
No 274
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=38.37 E-value=18 Score=35.17 Aligned_cols=28 Identities=14% Similarity=0.058 Sum_probs=25.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 207 NPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 207 NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
.|.|-.||++++++|++.|++++|-||=
T Consensus 215 ~~~~g~YT~~di~eIv~YA~~rgI~VIP 242 (543)
T 3rcn_A 215 RPHGGFYTQDDLREIVAFAADRHITVIP 242 (543)
T ss_dssp CCEECCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CccCCCcCHHHHHHHHHHHHHcCCEEee
Confidence 4557889999999999999999998886
No 275
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=37.95 E-value=1.1e+02 Score=26.76 Aligned_cols=95 Identities=14% Similarity=-0.031 Sum_probs=46.2
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCC----------Ccc---hHHHHHhcCceeeEeeeccCCCCCCChHHHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPT----------WSN---HHNIWRDAHVTQRTFHYYHPGTKGLDFAALM 187 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~----------y~~---y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~ 187 (337)
++++|++++|-.. +..|.+ .|..|++.+-. -.. ....++..|.++..+..+ --|.+.+.
T Consensus 30 vlVTGas~GIG~aia~~la~--~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~ 102 (322)
T 3qlj_A 30 VIVTGAGGGIGRAHALAFAA--EGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSN-----VADWDQAA 102 (322)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCC-----TTSHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHH--CCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHH
Confidence 3455665555433 344555 68888775432 111 223344556676666541 23555555
Q ss_pred HHHHcC---CCCeEEEEeCCCCCCCC--CCCCHHHHHHHHH
Q 047180 188 DDIKNA---PNGSFFLLHACAHNPTG--VDPSEEQWKEISY 223 (337)
Q Consensus 188 ~~l~~~---~~~~~ili~~~p~NPTG--~~~s~~~~~~l~~ 223 (337)
+.++.. -.+.-++++|--..+.+ ...+.++|++..+
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 143 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIA 143 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 544321 01222555443322222 2367888887655
No 276
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=37.85 E-value=1.5e+02 Score=25.72 Aligned_cols=95 Identities=12% Similarity=-0.020 Sum_probs=47.2
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHh---cC-ceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRD---AH-VTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~---~G-~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
++++||+++|-.. +..|.+ .|-.|++.+-.-.......+. .| .++..+.++ --|.+.+++.+...
T Consensus 44 vlVTGas~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~ 116 (293)
T 3rih_A 44 VLVTGGTKGIGRGIATVFAR--AGANVAVAARSPRELSSVTAELGELGAGNVIGVRLD-----VSDPGSCADAARTVVDA 116 (293)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEe-----CCCHHHHHHHHHHHHHH
Confidence 4555666555433 345555 687888776554444443332 33 355555441 22455554443321
Q ss_pred CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-.+.-++++|---.+.+. .++.++|++..+
T Consensus 117 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 148 (293)
T 3rih_A 117 FGALDVVCANAGIFPEARLDTMTPEQLSEVLD 148 (293)
T ss_dssp HSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 012224554433333333 468888887765
No 277
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=37.29 E-value=23 Score=33.18 Aligned_cols=28 Identities=11% Similarity=0.278 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
|++++++|++-|.++||-||.|-++...
T Consensus 75 t~~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 75 NEDEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 6899999999999999999999988664
No 278
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=37.03 E-value=1.4e+02 Score=25.50 Aligned_cols=94 Identities=10% Similarity=-0.060 Sum_probs=47.9
Q ss_pred eeccchhHHHH-HHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---CCCCeE
Q 047180 123 QSLSGTGACRL-FADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---APNGSF 198 (337)
Q Consensus 123 ~t~g~~~al~~-~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~~ 198 (337)
+++|++++|-. ++..|.+ .|-.|++.+-.-..-. .+...+.++..+..+ --|.+.+++.+++ .-.+--
T Consensus 6 lVTGas~GIG~aia~~la~--~Ga~V~~~~~~~~~~~-~~~~~~~~~~~~~~D-----v~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 6 IVTGGGHGIGKQICLDFLE--AGDKVCFIDIDEKRSA-DFAKERPNLFYFHGD-----VADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEESTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHH-HHHTTCTTEEEEECC-----TTSHHHHHHHHHHHHHHHSCCC
T ss_pred EEecCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHH-HHHHhcCCEEEEEec-----CCCHHHHHHHHHHHHHHcCCCC
Confidence 44455544443 3455555 6888887654322222 223345556655542 2244444443332 111223
Q ss_pred EEEeCCCCCCCCC--CCCHHHHHHHHHH
Q 047180 199 FLLHACAHNPTGV--DPSEEQWKEISYQ 224 (337)
Q Consensus 199 ili~~~p~NPTG~--~~s~~~~~~l~~~ 224 (337)
+++||--.++.+. .++.++|++++++
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 5666554454443 3688999998874
No 279
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=36.78 E-value=2e+02 Score=24.53 Aligned_cols=95 Identities=9% Similarity=0.019 Sum_probs=48.4
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|++++|-.. +..|.+ .|..|++.+-.-.......+..|.++..+..+ --|.+.+++.++.. -.+.
T Consensus 30 vlVTGas~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~i 102 (277)
T 4dqx_A 30 CIVTGGGSGIGRATAELFAK--NGAYVVVADVNEDAAVRVANEIGSKAFGVRVD-----VSSAKDAESMVEKTTAKWGRV 102 (277)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHCTTEEEEECC-----TTCHHHHHHHHHHHHHHHSCC
T ss_pred EEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCceEEEEec-----CCCHHHHHHHHHHHHHHcCCC
Confidence 3455555554433 345555 68888877654333444455556666666542 22455555444321 0112
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|--..+.+. ..+.++|+++.+
T Consensus 103 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 103 DVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 24554433333332 467888886554
No 280
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=36.63 E-value=22 Score=32.73 Aligned_cols=25 Identities=28% Similarity=-0.011 Sum_probs=22.5
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
|-.||++++++|++.|++++|-||=
T Consensus 89 ~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 89 KPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp CEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 4579999999999999999998874
No 281
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=36.47 E-value=2.3e+02 Score=25.26 Aligned_cols=81 Identities=9% Similarity=0.036 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHN 207 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~N 207 (337)
.+++.++-.+-.. .-|.|++..|+|....+ .| + .+.+++..+.. .-++++- |+|..
T Consensus 116 ~eai~la~~A~~~--Gadavlv~~P~Y~~~s~----~~--l--------------~~~f~~VA~a~-~lPiilY-n~P~~ 171 (332)
T 2r8w_A 116 DEAVALAKDAEAA--GADALLLAPVSYTPLTQ----EE--A--------------YHHFAAVAGAT-ALPLAIY-NNPTT 171 (332)
T ss_dssp HHHHHHHHHHHHH--TCSEEEECCCCSSCCCH----HH--H--------------HHHHHHHHHHC-SSCEEEE-CCHHH
T ss_pred HHHHHHHHHHHhc--CCCEEEECCCCCCCCCH----HH--H--------------HHHHHHHHHhc-CCCEEEE-eCccc
Confidence 4566655444322 23899999999853210 00 0 12222222222 2345544 33432
Q ss_pred CCCCCCCHHHHHHHHHHHHhcCceeEEcc
Q 047180 208 PTGVDPSEEQWKEISYQIKAKGHFPFFDM 236 (337)
Q Consensus 208 PTG~~~s~~~~~~l~~~~~~~~~~ii~De 236 (337)
||..++.+.+.+|++ -.+++=|=|.
T Consensus 172 -tg~~l~~e~~~~La~---~pnIvgiKds 196 (332)
T 2r8w_A 172 -TRFTFSDELLVRLAY---IPNIRAIKMP 196 (332)
T ss_dssp -HCCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred -cCcCCCHHHHHHHHc---CCCEEEEEeC
Confidence 899999999888864 2345445453
No 282
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=36.44 E-value=1.4e+02 Score=25.15 Aligned_cols=95 Identities=8% Similarity=-0.023 Sum_probs=46.7
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---CCCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---APNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~~~~ 197 (337)
++++|+++++-.. +..|.+ .|..|++.+-.-.......+..+.++..+..+ --|.+.+++.+++ .-.+.
T Consensus 11 vlVTGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 11 ALITGSARGIGRAFAEAYVR--EGATVAIADIDIERARQAAAEIGPAAYAVQMD-----VTRQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp EEEETCSSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCTTEEEEECC-----TTCHHHHHHHHHHHHHHSSSC
T ss_pred EEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCCceEEEee-----CCCHHHHHHHHHHHHHHcCCC
Confidence 3445555554433 344445 68888877654444444555555555555441 2245555544432 11122
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|-...+.+. ..+.++|++..+
T Consensus 84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 84 DILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 34554433332222 357788886544
No 283
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=36.43 E-value=2.2e+02 Score=25.00 Aligned_cols=26 Identities=12% Similarity=0.241 Sum_probs=16.4
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCc
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWS 155 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~ 155 (337)
.+++.++-.+-.. .-|.|++..|+|.
T Consensus 94 ~~ai~la~~A~~~--Gadavlv~~P~y~ 119 (306)
T 1o5k_A 94 EKTLKLVKQAEKL--GANGVLVVTPYYN 119 (306)
T ss_dssp HHHHHHHHHHHHH--TCSEEEEECCCSS
T ss_pred HHHHHHHHHHHhc--CCCEEEECCCCCC
Confidence 4556655443322 2389999999885
No 284
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=36.42 E-value=1.3e+02 Score=29.11 Aligned_cols=100 Identities=6% Similarity=0.036 Sum_probs=56.6
Q ss_pred EEeeccchhH-HHHHHHHHh------hhCCCCeEEEcCCCCcchHH-------HHHhcCceeeEeeecc-CCCCCCChHH
Q 047180 121 AVQSLSGTGA-CRLFADFQK------RFHPDSQIYIPVPTWSNHHN-------IWRDAHVTQRTFHYYH-PGTKGLDFAA 185 (337)
Q Consensus 121 ~~~t~g~~~a-l~~~~~~l~------~~~pgd~Vlv~~P~y~~y~~-------~~~~~G~~~~~~~~~~-~~~~~~d~~~ 185 (337)
++++.|+++. ...+.++.. .+.++|+|++....+|+... .+...|++++...... .-..--|.++
T Consensus 309 vi~~tg~~ge~~~~l~ria~~~h~~~~~~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~e 388 (562)
T 3bk2_A 309 LILATGSQGQPMSVLHRLAFEGHAKMAIKPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEE 388 (562)
T ss_dssp EEEECCTTSCSHHHHHHHHTTCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHH
T ss_pred EEEEcCCCchhHHHHHhhhhcccccccCCCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHH
Confidence 4566666543 332333321 12379999999988888632 3445788876432000 0012346777
Q ss_pred HHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCc
Q 047180 186 LMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGH 230 (337)
Q Consensus 186 l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~ 230 (337)
+...+...+++.++.+.. ....+.++++++++.++
T Consensus 389 L~~~i~~~~Pk~vipvHG----------e~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 389 LKLILNLTTPRFFLPWHG----------EVRHQMNFKWLAESMSR 423 (562)
T ss_dssp HHHHHHHHCCSEEEEESB----------CHHHHHHHHHHHHTSSS
T ss_pred HHHHHHhcCCCEEEEEcC----------CHHHHHHHHHHHHHcCC
Confidence 777665444445555543 23567778888887664
No 285
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=36.26 E-value=1.3e+02 Score=25.21 Aligned_cols=95 Identities=6% Similarity=-0.080 Sum_probs=44.7
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
+++.|+++++-.. +..|.+ .|..|++.+-.-.......+..|.++..+.. | --|.+.+++.++.. -.+.
T Consensus 9 vlVTGas~giG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D----~~~~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 9 ALVTGGASGVGLEVVKLLLG--EGAKVAFSDINEAAGQQLAAELGERSMFVRH-D----VSSEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEECSCHHHHHHHHHHHCTTEEEECC-C----TTCHHHHHHHHHHHHHHHCSC
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHcCCceEEEEc-c----CCCHHHHHHHHHHHHHHcCCC
Confidence 3455666555433 344555 5878877654433333333333555555543 1 22455555544321 0112
Q ss_pred EEEEeCCCCCCCC--CCCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTG--VDPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG--~~~s~~~~~~l~~ 223 (337)
-++++|-...+.+ ...+.++|++..+
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2455443322222 2357787776543
No 286
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=35.75 E-value=1.5e+02 Score=25.28 Aligned_cols=94 Identities=12% Similarity=0.016 Sum_probs=50.1
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCc-chHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEE
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWS-NHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFF 199 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~-~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~i 199 (337)
.+++|++++|-.+ +..|.+ .|-.|++.+-.-. .-...++..|.++..+..+-. |.+..++.++. .+--+
T Consensus 12 alVTGas~GIG~aiA~~la~--~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~--g~iDi 82 (247)
T 4hp8_A 12 ALVTGANTGLGQAIAVGLAA--AGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTD--AGFDI 82 (247)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTT--TCCCE
T ss_pred EEEeCcCCHHHHHHHHHHHH--cCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHh--CCCCE
Confidence 3445555554443 456666 6877777643221 234556678888777765221 22222232222 12235
Q ss_pred EEeCCCCCCCCC--CCCHHHHHHHHHH
Q 047180 200 LLHACAHNPTGV--DPSEEQWKEISYQ 224 (337)
Q Consensus 200 li~~~p~NPTG~--~~s~~~~~~l~~~ 224 (337)
++||---++.+- .++.++|++++++
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~v 109 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDV 109 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHH
Confidence 665533333333 3789999998874
No 287
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=35.73 E-value=1.9e+02 Score=25.28 Aligned_cols=25 Identities=20% Similarity=0.171 Sum_probs=16.3
Q ss_pred eEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 047180 197 SFFLLHACAHNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 197 ~~ili~~~p~NPTG~~~s~~~~~~l~~ 223 (337)
++++- |+|. .||..++.+.+.+|++
T Consensus 129 PiilY-n~P~-~tg~~l~~~~~~~La~ 153 (292)
T 2ojp_A 129 PQILY-NVPS-RTGCDLLPETVGRLAK 153 (292)
T ss_dssp CEEEE-CCHH-HHSCCCCHHHHHHHHT
T ss_pred CEEEE-eCcc-hhccCCCHHHHHHHHc
Confidence 45443 3343 3899999888887764
No 288
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=35.42 E-value=22 Score=37.39 Aligned_cols=28 Identities=21% Similarity=0.382 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 215 EEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 215 ~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
.++++++++-|.++||-||.|-+|..+.
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 6999999999999999999999987654
No 289
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=35.25 E-value=73 Score=27.24 Aligned_cols=95 Identities=13% Similarity=-0.057 Sum_probs=47.1
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCC------------Ccc---hHHHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPT------------WSN---HHNIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~------------y~~---y~~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
++++|++++|-.. +..|.+ .|..|++.+-. -.. ....++..|.++..+.++ --|.+.
T Consensus 13 vlVTGas~gIG~~ia~~l~~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~ 85 (287)
T 3pxx_A 13 VLVTGGARGQGRSHAVKLAE--EGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVD-----VRDRAA 85 (287)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECC-----TTCHHH
T ss_pred EEEeCCCChHHHHHHHHHHH--CCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEcc-----CCCHHH
Confidence 3455555554433 344455 68777775322 001 112234456666666552 224555
Q ss_pred HHHHHHcC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 047180 186 LMDDIKNA---PNGSFFLLHACAHNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 186 l~~~l~~~---~~~~~ili~~~p~NPTG~~~s~~~~~~l~~ 223 (337)
+.+.+.+. -.+.-++++|--..+.+...+.++|++..+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~ 126 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFD 126 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhh
Confidence 54444321 012234555544444455578888888765
No 290
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=34.53 E-value=2.3e+02 Score=24.54 Aligned_cols=86 Identities=9% Similarity=-0.045 Sum_probs=52.6
Q ss_pred CCCeEEEcCCCCcchH---HHHHhcCce-eeEeeeccCCCC------------CCChHHHHHHHHcC--CCCeEEEEeCC
Q 047180 143 PDSQIYIPVPTWSNHH---NIWRDAHVT-QRTFHYYHPGTK------------GLDFAALMDDIKNA--PNGSFFLLHAC 204 (337)
Q Consensus 143 pgd~Vlv~~P~y~~y~---~~~~~~G~~-~~~~~~~~~~~~------------~~d~~~l~~~l~~~--~~~~~ili~~~ 204 (337)
|...-+-..|.-+.-. ..++..|.+ ++..|+... ++ +++.++++..+... .-.-.+-+
T Consensus 54 P~pvT~Ai~P~~p~~~~~a~~A~~~G~EvllHlPMep~-~~p~~~~gp~~L~~~~s~~ei~~~l~~al~~vP~a~Gv--- 129 (261)
T 2qv5_A 54 PPEVTLGFAASGNSLQRWMQDARREGHEILLQIPLEPF-GYPGTNPGPDTLLAGDPAKVNIDRLHRSMAKITNYTGV--- 129 (261)
T ss_dssp CTTSEEEEETTCSSHHHHHHHHHHHTCCEEEEEEECCT-TTTTSCCCTTCBCTTSCHHHHHHHHHHHHTTCCCCSEE---
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHCCCEEEEECCCCCC-CCCCCCCCcCcCcCCCCHHHHHHHHHHHHHHCCCcEEE---
Confidence 6666666667666543 455568876 677887321 21 25566666655431 11223444
Q ss_pred CCCCCCCCCC--HHHHHHHHHHHHhcCceeE
Q 047180 205 AHNPTGVDPS--EEQWKEISYQIKAKGHFPF 233 (337)
Q Consensus 205 p~NPTG~~~s--~~~~~~l~~~~~~~~~~ii 233 (337)
||=+|.-++ ++-++.+++.++++|++.+
T Consensus 130 -nNHmGS~~T~~~~~M~~vm~~L~~~gL~Fl 159 (261)
T 2qv5_A 130 -MNYLGGRFLAEQSALEPVMRDIGKRGLLFL 159 (261)
T ss_dssp -EEEECTTGGGCHHHHHHHHHHHHHTTCEEE
T ss_pred -ecccccchhcCHHHHHHHHHHHHHCCCEEE
Confidence 455677555 6679999999999987655
No 291
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=34.04 E-value=1.8e+02 Score=24.73 Aligned_cols=95 Identities=7% Similarity=0.003 Sum_probs=47.1
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHH---HhcCceeeEeeeccCCCCCCChHHHHHHHHc---CC
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIW---RDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---AP 194 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~---~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~ 194 (337)
++++|++++|-.. +..|.+ .|..|++.+-.-....... +..|.++..+.++ --|.+.+.+.++. .-
T Consensus 29 ~lVTGas~gIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~ 101 (271)
T 4ibo_A 29 ALVTGSSRGLGRAMAEGLAV--AGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFD-----VTSESEIIEAFARLDEQG 101 (271)
T ss_dssp EEETTCSSHHHHHHHHHHHH--TTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCC-----TTCHHHHHHHHHHHHHHT
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcC-----CCCHHHHHHHHHHHHHHC
Confidence 4455665554433 345555 6888888765443333332 3346666655441 2345555554432 11
Q ss_pred CCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 195 NGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.+.-++++|---.+.+. ..+.++|++..+
T Consensus 102 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 102 IDVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp CCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 12234554433222222 368888887655
No 292
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=33.21 E-value=2e+02 Score=23.65 Aligned_cols=65 Identities=6% Similarity=-0.095 Sum_probs=34.4
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 193 (337)
++++||++++-.. +..|.+ .|..|++.+-.-.......+..+.++..+.. .--|.+.+.+.+++.
T Consensus 17 vlVTGas~gIG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-----D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 17 SLITGASSGIGSAIARLLHK--LGSKVIISGSNEEKLKSLGNALKDNYTIEVC-----NLANKEECSNLISKT 82 (249)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCSSEEEEEC-----CTTSHHHHHHHHHTC
T ss_pred EEEECCCChHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHhccCccEEEc-----CCCCHHHHHHHHHhc
Confidence 4555665554433 344455 6888887765444444444444444443333 123567777777654
No 293
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=31.79 E-value=2.2e+02 Score=23.47 Aligned_cols=95 Identities=7% Similarity=0.066 Sum_probs=45.6
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHc---CC
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKN---AP 194 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~---~~ 194 (337)
+++.|+++++-.. +..|.+ .|-.|++.+-.-..... .++..|.++..+.++ --|.+.+++.+.+ ..
T Consensus 8 vlITGas~gIG~~~a~~l~~--~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 8 ALVTGASRGIGFEVAHALAS--KGATVVGTATSQASAEKFENSMKEKGFKARGLVLN-----ISDIESIQNFFAEIKAEN 80 (247)
T ss_dssp EEESSCSSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHTT
T ss_pred EEEECCCChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEec-----CCCHHHHHHHHHHHHHHc
Confidence 3455565554433 344445 58788776554333322 233446666666542 1245555444332 21
Q ss_pred CCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 195 NGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.+.-++++|--..+.+. ..+.++|++..+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 12224554432222222 357788876554
No 294
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=31.53 E-value=1.3e+02 Score=25.25 Aligned_cols=95 Identities=11% Similarity=0.059 Sum_probs=45.5
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-..-....+..+.+...+.++ --|.+.+++.++.. -.+.
T Consensus 12 ~lVTGas~gIG~a~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 12 ALVTGASRGIGKAIAELLAE--RGAKVIGTATSESGAQAISDYLGDNGKGMALN-----VTNPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp EEESSCSSHHHHHHHHHHHH--TTCEEEEEESSHHHHHHHHHHHGGGEEEEECC-----TTCHHHHHHHHHHHHHHHCCC
T ss_pred EEEeCCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhcccceEEEEe-----CCCHHHHHHHHHHHHHHcCCC
Confidence 3455555554433 344555 68888776544333333444444444444431 22455555544321 0112
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|--..+.+. .++.++|++..+
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 85 DILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 24554433333332 357888887655
No 295
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=31.49 E-value=1.9e+02 Score=23.95 Aligned_cols=95 Identities=14% Similarity=-0.041 Sum_probs=44.2
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCC-cchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCC
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTW-SNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNG 196 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y-~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~ 196 (337)
++++|+++++-.. +..|.+ .|-.|++.+-.- ......++..|.++..++.+ --|.+.+++.++.. -.+
T Consensus 10 vlVTGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~ 82 (249)
T 2ew8_A 10 AVITGGANGIGRAIAERFAV--EGADIAIADLVPAPEAEAAIRNLGRRVLTVKCD-----VSQPGDVEAFGKQVISTFGR 82 (249)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEESSCCHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHHHSC
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCEEEEEcCCchhHHHHHHHhcCCcEEEEEee-----cCCHHHHHHHHHHHHHHcCC
Confidence 3445665554433 344455 587777654322 22222344456666655541 12455555443321 012
Q ss_pred eEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 197 SFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 197 ~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.-++++|-...+.+. ..+.++|++..+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 83 CDILVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 224554433233332 357787776554
No 296
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=30.95 E-value=2e+02 Score=27.16 Aligned_cols=44 Identities=11% Similarity=-0.031 Sum_probs=29.7
Q ss_pred EeeccchhHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCcee
Q 047180 122 VQSLSGTGACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQ 168 (337)
Q Consensus 122 ~~t~g~~~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~ 168 (337)
++-.|++|. ..++.+|.+ .|-.|.+.+-.+......++..|.++
T Consensus 27 viGiG~sG~-s~~A~~l~~--~G~~V~~~D~~~~~~~~~l~~~gi~~ 70 (494)
T 4hv4_A 27 FVGIGGAGM-GGIAEVLAN--EGYQISGSDLAPNSVTQHLTALGAQI 70 (494)
T ss_dssp EETTTSTTH-HHHHHHHHH--TTCEEEEECSSCCHHHHHHHHTTCEE
T ss_pred EEEEcHhhH-HHHHHHHHh--CCCeEEEEECCCCHHHHHHHHCCCEE
Confidence 334455443 323455666 69999999988887777788888765
No 297
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=30.87 E-value=1.8e+02 Score=24.51 Aligned_cols=50 Identities=10% Similarity=-0.060 Sum_probs=25.9
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHH---h-cCceeeEeee
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWR---D-AHVTQRTFHY 173 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~---~-~G~~~~~~~~ 173 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-.......+ . .|.++..+.+
T Consensus 23 vlVTGas~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~ 77 (266)
T 4egf_A 23 ALITGATKGIGADIARAFAA--AGARLVLSGRDVSELDAARRALGEQFGTDVHTVAI 77 (266)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEe
Confidence 4555666555433 344555 68778776543333222222 1 4666666655
No 298
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=30.77 E-value=2.4e+02 Score=23.59 Aligned_cols=95 Identities=11% Similarity=-0.046 Sum_probs=46.3
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---C
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---P 194 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~ 194 (337)
++++|++++|-.. +..|.+ .|..|++.+-.-..... .++..|.++..+..+ --|.+.+++.+++. -
T Consensus 15 vlVTGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~ 87 (256)
T 3gaf_A 15 AIVTGAAAGIGRAIAGTFAK--AGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECN-----VTDEQHREAVIKAALDQF 87 (256)
T ss_dssp EEECSCSSHHHHHHHHHHHH--HTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHHc
Confidence 3455665554433 344444 58778776544333322 233456676666542 22455554444321 0
Q ss_pred CCeEEEEeCCCCC-CCCCCCCHHHHHHHHH
Q 047180 195 NGSFFLLHACAHN-PTGVDPSEEQWKEISY 223 (337)
Q Consensus 195 ~~~~ili~~~p~N-PTG~~~s~~~~~~l~~ 223 (337)
.+.-++++|--.. +.....+.++|++..+
T Consensus 88 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 88 GKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp SCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 1222455443222 2223678888887655
No 299
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=29.56 E-value=45 Score=31.05 Aligned_cols=29 Identities=21% Similarity=0.279 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 48999999999999999999999987765
No 300
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=29.42 E-value=1.7e+02 Score=24.49 Aligned_cols=95 Identities=14% Similarity=-0.010 Sum_probs=45.7
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHH---hcCceeeEeeeccCCCCCCChHHHHHHHHcC---C
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWR---DAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---P 194 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~---~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~ 194 (337)
++++|++++|-.. +..|.+ .|..|++.+-.-.......+ ..|.++..+..+ --|.+.+++.++.. -
T Consensus 9 vlVTGas~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 9 VIITGGSSGMGKGMATRFAK--EGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMD-----VRNTDDIQKMIEQIDEKF 81 (257)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcc-----CCCHHHHHHHHHHHHHHc
Confidence 4555666555433 345555 68888776544333333222 235556655541 22445555444321 0
Q ss_pred CCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 195 NGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.+.-++++|--..+.+. ..+.++|++..+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVIN 112 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 12224554432222222 467888887665
No 301
>4es6_A Uroporphyrinogen-III synthase; heme-biosynthesis, cytoplasmi; 2.22A {Pseudomonas aeruginosa}
Probab=29.28 E-value=24 Score=30.19 Aligned_cols=58 Identities=5% Similarity=-0.054 Sum_probs=34.3
Q ss_pred CCCeEEEcCCCC--cchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEE
Q 047180 143 PDSQIYIPVPTW--SNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLL 201 (337)
Q Consensus 143 pgd~Vlv~~P~y--~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili 201 (337)
.|.+|++..|.- ..+...++..|++++.+|+..-. ...|.+.+.+.+.....-..+++
T Consensus 5 ~g~~vlvtRp~~~~~~l~~~L~~~G~~~~~~P~i~i~-~~~~~~~l~~~l~~l~~~d~vif 64 (254)
T 4es6_A 5 SGWRLLLTRPDEECAALAASLGEAGVHSSSLPLLAID-PLEETPEQRTLMLDLDRYCAVVV 64 (254)
T ss_dssp -CCEEEECSCHHHHHHHHHHHHHTTCEEEECCSCEEE-ECCCCHHHHHHHHTGGGCSEEEE
T ss_pred CCCEEEEeCChHHhHHHHHHHHHCCCcEEEeCCEEEe-eCcChHHHHHHHHhccCCCEEEE
Confidence 478999998853 45677888899999999875421 11123445554443222244555
No 302
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=29.25 E-value=1.1e+02 Score=26.06 Aligned_cols=95 Identities=7% Similarity=-0.044 Sum_probs=46.2
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCC-cch---HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTW-SNH---HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y-~~y---~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
++++|++++|-.. +..|.+ .|-.|++..-.- ... ...++..|.++..+.++ --|.+.+.+.+++.
T Consensus 21 ~lVTGas~gIG~aia~~l~~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 21 ALVTGSGRGIGAAVAVHLGR--LGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKAD-----IRQVPEIVKLFDQAVAH 93 (270)
T ss_dssp EEESCTTSHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC-----TTSHHHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHH--CCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 3455565554433 344555 687777642211 111 22334457677766552 22455555544321
Q ss_pred CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-.+.-++++|--..+.+. .++.++|++..+
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 125 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFS 125 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 012235554433333333 358888887765
No 303
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=29.17 E-value=2.5e+02 Score=25.89 Aligned_cols=30 Identities=23% Similarity=0.231 Sum_probs=26.8
Q ss_pred CCHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 213 PSEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 213 ~s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
.+.+.+.++++.|+++|+-|+.|--|.++-
T Consensus 86 ~d~~~~~~~a~~Ak~~GLkVlldfHysD~W 115 (399)
T 1ur4_A 86 NDLEKAIQIGKRATANGMKLLADFHYSDFW 115 (399)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSSSSC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeccCCcc
Confidence 678999999999999999999998887763
No 304
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=28.97 E-value=2.7e+02 Score=23.66 Aligned_cols=50 Identities=4% Similarity=-0.170 Sum_probs=28.8
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeee
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~ 173 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-.......+..|.++..+..
T Consensus 8 ~lVTGas~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 58 (281)
T 3zv4_A 8 ALITGGASGLGRALVDRFVA--EGARVAVLDKSAERLRELEVAHGGNAVGVVG 58 (281)
T ss_dssp EEEETCSSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHTBTTEEEEEC
T ss_pred EEEECCCcHHHHHHHHHHHH--CcCEEEEEeCCHHHHHHHHHHcCCcEEEEEc
Confidence 3445555554433 344555 6888888765544445555556666666654
No 305
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=28.86 E-value=3e+02 Score=24.19 Aligned_cols=36 Identities=8% Similarity=-0.007 Sum_probs=22.5
Q ss_pred CeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHh-cCceeEEccc
Q 047180 196 GSFFLLHACAHNPTGVDPSEEQWKEISYQIKA-KGHFPFFDMA 237 (337)
Q Consensus 196 ~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~-~~~~ii~De~ 237 (337)
-++++- |.|. ||..++.+.+.+|++ + .+++=|=||+
T Consensus 138 lPiilY-n~P~--tg~~l~~~~~~~La~---~~pnIvgiK~~~ 174 (309)
T 3fkr_A 138 IPIMVQ-DAPA--SGTALSAPFLARMAR---EIEQVAYFXIET 174 (309)
T ss_dssp SCEEEE-ECGG--GCCCCCHHHHHHHHH---HSTTEEEEEECS
T ss_pred CCEEEE-eCCC--CCCCCCHHHHHHHHh---hCCCEEEEECCC
Confidence 345554 5564 899999887766653 3 3565555554
No 306
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=28.85 E-value=2.3e+02 Score=24.41 Aligned_cols=95 Identities=11% Similarity=-0.027 Sum_probs=45.5
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCC------------Ccch---HHHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPT------------WSNH---HNIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~------------y~~y---~~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
++++|++++|-.. +..|.+ .|..|++.+-. -... ...++..|.++..+.++ --|.+.
T Consensus 31 ~lVTGas~GIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~ 103 (299)
T 3t7c_A 31 AFITGAARGQGRSHAITLAR--EGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVD-----VRDFDA 103 (299)
T ss_dssp EEEESTTSHHHHHHHHHHHH--TTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHH
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECC-----CCCHHH
Confidence 3445555554433 344555 68777775322 0111 12234456677766652 224555
Q ss_pred HHHHHHcC---CCCeEEEEeCCCCCCCC---CCCCHHHHHHHHH
Q 047180 186 LMDDIKNA---PNGSFFLLHACAHNPTG---VDPSEEQWKEISY 223 (337)
Q Consensus 186 l~~~l~~~---~~~~~ili~~~p~NPTG---~~~s~~~~~~l~~ 223 (337)
+.+.++.. -.+.-++++|---.+.+ ..++.++|++..+
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 55544321 01122455443322222 2468888887765
No 307
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=28.84 E-value=49 Score=30.50 Aligned_cols=29 Identities=14% Similarity=0.156 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-++....
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 47999999999999999999999887654
No 308
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=28.62 E-value=2.3e+02 Score=23.67 Aligned_cols=62 Identities=5% Similarity=-0.150 Sum_probs=29.9
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHH---HHhcCceeeEeeeccCCCCCCChHHHHHHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNI---WRDAHVTQRTFHYYHPGTKGLDFAALMDDI 190 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~---~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l 190 (337)
++++|+++++-.. +..|.+ .|-.|++.+-.-...... ++..|.++..++.+ --|.+.+++.+
T Consensus 8 vlVTGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~ 73 (260)
T 2qq5_A 8 CVVTGASRGIGRGIALQLCK--AGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCD-----SSQESEVRSLF 73 (260)
T ss_dssp EEESSTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECC-----TTSHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECC-----CCCHHHHHHHH
Confidence 3455666555433 344555 687887754332222222 22236566655541 22455554444
No 309
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=28.58 E-value=37 Score=31.82 Aligned_cols=30 Identities=17% Similarity=0.225 Sum_probs=26.7
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFAS 243 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~ 243 (337)
+.+++++|++-|.++|+-||.|-++.....
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 489999999999999999999999876643
No 310
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=28.58 E-value=2.5e+02 Score=23.93 Aligned_cols=95 Identities=8% Similarity=-0.038 Sum_probs=47.1
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCc----------chHHHHHhcCceeeEeeeccCCCCCCChHHHHHHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWS----------NHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDI 190 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~----------~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l 190 (337)
++++|++++|-.. +..|.+ .|..|++.+-.-. .....++..|.++..+.++ --|.+.+++.+
T Consensus 12 vlVTGas~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~ 84 (285)
T 3sc4_A 12 MFISGGSRGIGLAIAKRVAA--DGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGD-----IRDGDAVAAAV 84 (285)
T ss_dssp EEEESCSSHHHHHHHHHHHT--TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECC-----TTSHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHH
Confidence 3455555554433 344444 5877777543322 1223344557777776652 12455555444
Q ss_pred HcC---CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 191 KNA---PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 191 ~~~---~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
++. -.+.-++++|--..+.+. ..+.++|++..+
T Consensus 85 ~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 122 (285)
T 3sc4_A 85 AKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNG 122 (285)
T ss_dssp HHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 321 012224554433333332 468888887665
No 311
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=28.00 E-value=50 Score=31.03 Aligned_cols=29 Identities=14% Similarity=0.151 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 37999999999999999999999887664
No 312
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=27.17 E-value=2.7e+02 Score=23.08 Aligned_cols=95 Identities=7% Similarity=-0.110 Sum_probs=45.8
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|+++++-.. +..|.+ .|-.|++.+-.-.......+..+.++..+.++ --|.+.+++.+++. -.+.
T Consensus 12 vlITGas~gIG~~~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~~g~i 84 (261)
T 3n74_A 12 ALITGAGSGFGEGMAKRFAK--GGAKVVIVDRDKAGAERVAGEIGDAALAVAAD-----ISKEADVDAAVEAALSKFGKV 84 (261)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHCTTEEEEECC-----TTSHHHHHHHHHHHHHHHSCC
T ss_pred EEEECCCchHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHhCCceEEEEec-----CCCHHHHHHHHHHHHHhcCCC
Confidence 3445555554332 344444 58788877655444445555566666666542 12445544444321 0112
Q ss_pred EEEEeCCCC-CCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAH-NPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~-NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|--. .+.+. ..+.++|++..+
T Consensus 85 d~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 85 DILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp CEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 244433221 11221 247788776544
No 313
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=27.14 E-value=2.7e+02 Score=23.13 Aligned_cols=95 Identities=11% Similarity=-0.062 Sum_probs=42.8
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
+++.|+++++-.. +..|.+ .|..|++.+-.-.......+..|.++..+.. | --|.+.+.+.++.. -.+.
T Consensus 8 vlVTGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-D----~~~~~~~~~~~~~~~~~~g~i 80 (254)
T 1hdc_A 8 VIITGGARGLGAEAARQAVA--AGARVVLADVLDEEGAATARELGDAARYQHL-D----VTIEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHTTGGGEEEEEC-C----TTCHHHHHHHHHHHHHHHSCC
T ss_pred EEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHhCCceeEEEe-c----CCCHHHHHHHHHHHHHHcCCC
Confidence 3455665555433 344555 6877777543322223333334555555544 1 12455555544321 0112
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|-.-.+.+. ..+.++|++..+
T Consensus 81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 81 DGLVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CEEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 24554432222221 357777765443
No 314
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=27.01 E-value=52 Score=31.30 Aligned_cols=29 Identities=10% Similarity=0.048 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-+|....
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHts 106 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHTS 106 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCCc
Confidence 57999999999999999999999987653
No 315
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=26.89 E-value=55 Score=30.90 Aligned_cols=29 Identities=10% Similarity=0.190 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 48999999999999999999999987764
No 316
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=26.72 E-value=2.1e+02 Score=25.71 Aligned_cols=81 Identities=15% Similarity=0.067 Sum_probs=43.1
Q ss_pred hhHHHHHHHHHhhhCCCCeEEEcCCCCcc-hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCC
Q 047180 128 TGACRLFADFQKRFHPDSQIYIPVPTWSN-HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAH 206 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pgd~Vlv~~P~y~~-y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~ 206 (337)
.+++.++-.+-.. .-|.|++..|+|.. ..+ .| + .+.+++..+....-++++. |.|
T Consensus 105 ~eai~la~~A~~~--Gadavlv~~P~y~~~~s~----~~--l--------------~~~f~~IA~aa~~lPiilY-n~P- 160 (344)
T 2hmc_A 105 ASAVAHAVHAQKV--GAKGLMVIPRVLSRGSVI----AA--Q--------------KAHFKAILSAAPEIPAVIY-NSP- 160 (344)
T ss_dssp HHHHHHHHHHHHH--TCSEEEECCCCSSSTTCH----HH--H--------------HHHHHHHHHHSTTSCEEEE-EBG-
T ss_pred HHHHHHHHHHHhc--CCCEEEECCCccCCCCCH----HH--H--------------HHHHHHHHhhCCCCcEEEE-ecC-
Confidence 3556655443322 23899999999853 110 00 0 1222222220223355554 456
Q ss_pred CCCCCCCCHHHHHHH-HHHHHhcCceeEEcc
Q 047180 207 NPTGVDPSEEQWKEI-SYQIKAKGHFPFFDM 236 (337)
Q Consensus 207 NPTG~~~s~~~~~~l-~~~~~~~~~~ii~De 236 (337)
.||..++.+.+.+| ++ -.+++=|=|.
T Consensus 161 -~tg~~l~~e~~~~L~a~---~pnIvGiKds 187 (344)
T 2hmc_A 161 -YYGFATRADLFFALRAE---HKNLVGFKEF 187 (344)
T ss_dssp -GGTBCCCHHHHHHHHHH---CTTEEEEEEC
T ss_pred -ccCCCcCHHHHHHHHhc---CCCEEEEEcC
Confidence 69999999998888 43 2355444443
No 317
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=26.68 E-value=2.1e+02 Score=24.28 Aligned_cols=95 Identities=14% Similarity=-0.006 Sum_probs=45.7
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHH----hcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWR----DAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~----~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-.......+ ..|.++..+..+ --|.+.+++.++..
T Consensus 30 ~lVTGas~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 30 AFITGGGSGIGFRIAEIFMR--HGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMD-----VRAPPAVMAAVDQALKE 102 (277)
T ss_dssp EEEETTTSHHHHHHHHHHHT--TTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred EEEeCCCchHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 3455555554433 344555 68788776544333332222 246666666542 12455554444321
Q ss_pred CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-.+.-++++|---.+.+. .++.++|++..+
T Consensus 103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 134 (277)
T 4fc7_A 103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMD 134 (277)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCcCCCCCCcccCCHHHHHHHHH
Confidence 012234554432222222 367888887765
No 318
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=26.68 E-value=2.4e+02 Score=22.44 Aligned_cols=98 Identities=12% Similarity=0.087 Sum_probs=55.6
Q ss_pred cchhHHHHHHHHHhhhC---CCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEe
Q 047180 126 SGTGACRLFADFQKRFH---PDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLH 202 (337)
Q Consensus 126 g~~~al~~~~~~l~~~~---pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~ 202 (337)
.+.+...+++-++.+.. .+..|+...|-+..|...+...|.....+-+....+..-.+..+|+++.. ...-.|+
T Consensus 54 ~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrs--G~~~aVl- 130 (161)
T 1oft_A 54 LPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRL--GRSHTVV- 130 (161)
T ss_dssp CHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHT--TCEEEEE-
T ss_pred CcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhc--CCccEEE-
Confidence 33344444444444422 34566666777788999999999864444332332222235677888874 2223333
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhcCce
Q 047180 203 ACAHNPTGVDPSEEQWKEISYQIKAKGHF 231 (337)
Q Consensus 203 ~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ 231 (337)
+-+. .++.++.++|---|++-+..
T Consensus 131 ~Wl~-----~l~~~~~RRLqlAAe~g~~~ 154 (161)
T 1oft_A 131 SWLE-----PLSRAARKQLSRAAQLGQAQ 154 (161)
T ss_dssp ECCS-----SCCHHHHHHHHHHHHHTTCE
T ss_pred ECCC-----cCChHHHHHHHHHHHhCCCe
Confidence 2222 37888888887767665543
No 319
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=26.30 E-value=55 Score=31.39 Aligned_cols=29 Identities=14% Similarity=0.252 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-++....
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~ 119 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMN 119 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcC
Confidence 38999999999999999999999887654
No 320
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=26.19 E-value=46 Score=31.41 Aligned_cols=29 Identities=10% Similarity=0.028 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-++....
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 38999999999999999999999987664
No 321
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=26.07 E-value=59 Score=30.31 Aligned_cols=29 Identities=21% Similarity=0.098 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-++....
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 58999999999999999999999886654
No 322
>3dgp_A RNA polymerase II transcription factor B subunit; protein-protein complex, beta-alpha-beta spilt, heterodimer, damage, DNA excision; 1.80A {Saccharomyces cerevisiae}
Probab=26.00 E-value=70 Score=22.47 Aligned_cols=29 Identities=14% Similarity=0.202 Sum_probs=25.0
Q ss_pred CCHHHHHHHHHHHHhcCceeEEcccCCCC
Q 047180 213 PSEEQWKEISYQIKAKGHFPFFDMAYQGF 241 (337)
Q Consensus 213 ~s~~~~~~l~~~~~~~~~~ii~De~Y~~~ 241 (337)
.|.++.+.+++.|++.|++|..|+.=.-|
T Consensus 30 ~s~~efe~~~~yA~e~gvLlW~~~~kr~~ 58 (80)
T 3dgp_A 30 ETSQEYNLLSKYAQDIGVLLWKDDKKKKF 58 (80)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEETTTTEE
T ss_pred CCHHHHHHHHHHHHHcCeEEEecCCccEE
Confidence 35699999999999999999999876554
No 323
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=25.87 E-value=2.4e+02 Score=27.12 Aligned_cols=99 Identities=8% Similarity=0.004 Sum_probs=56.1
Q ss_pred EEeeccchhH-HHHHHHHHhh------hCCCCeEEEcCCCCcchHH-------HHHhcCceeeE--eeeccCCCCCCChH
Q 047180 121 AVQSLSGTGA-CRLFADFQKR------FHPDSQIYIPVPTWSNHHN-------IWRDAHVTQRT--FHYYHPGTKGLDFA 184 (337)
Q Consensus 121 ~~~t~g~~~a-l~~~~~~l~~------~~pgd~Vlv~~P~y~~y~~-------~~~~~G~~~~~--~~~~~~~~~~~d~~ 184 (337)
+++++|++|- ...+.+.... +.|||+|++.....|+... .+...|++++. .....- ...-+-+
T Consensus 294 vii~tgsqGe~~~~L~r~a~~~~~~~~~~~~d~vi~s~~~ipGne~~~~~~~~~l~~~g~~v~~~~~~~~h~-SgHa~~~ 372 (555)
T 3zq4_A 294 TILCTGSQGEPMAALSRIANGTHRQISINPGDTVVFSSSPIPGNTISVSRTINQLYRAGAEVIHGPLNDIHT-SGHGGQE 372 (555)
T ss_dssp EEEECCTTCCTTSHHHHHHSSCCSSCCCCTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECSSSSCCCC-CSSCCHH
T ss_pred EEEeCCCCchHHHHHHHHhcCCCCccccCCCCEEEEECCCCCCcHHHHHHHHHHHHHCCCEEEecCCcceEE-eCCCCHH
Confidence 4566666543 3333344332 2368999999998888663 23557888764 110010 1234677
Q ss_pred HHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCc
Q 047180 185 ALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGH 230 (337)
Q Consensus 185 ~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~ 230 (337)
++...+...+++.++.+.. ....+.+.++++++.|+
T Consensus 373 eL~~~~~~~~Pk~~ipvHG----------e~~~~~~~~~~a~~~G~ 408 (555)
T 3zq4_A 373 EQKLMLRLIKPKFFMPIHG----------EYRMQKMHVKLATDCGI 408 (555)
T ss_dssp HHHHHHHHSCEEEEEEESB----------CHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhCCCEEEEcCC----------CHHHHHHHHHHHHHcCC
Confidence 8877766543333444432 23567777888887654
No 324
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=25.86 E-value=3e+02 Score=23.17 Aligned_cols=95 Identities=8% Similarity=-0.017 Sum_probs=48.9
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|++++|-.. +..|.+ .|..|++.+-.-.......+..|.++..+..+ --|.+.+++.++.. -.+.
T Consensus 14 vlVTGas~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 14 AIITGACGGIGLETSRVLAR--AGARVVLADLPETDLAGAAASVGRGAVHHVVD-----LTNEVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEECTTSCHHHHHHHHCTTCEEEECC-----TTCHHHHHHHHHHHHHHHSCC
T ss_pred EEEECCCcHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHhCCCeEEEECC-----CCCHHHHHHHHHHHHHHcCCC
Confidence 3455555554433 344555 68888877665555566666666666665541 12455555444321 0122
Q ss_pred EEEEeCCCCC-C-CCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHN-P-TGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~N-P-TG~--~~s~~~~~~l~~ 223 (337)
-++++|--.. | .+. .++.++|++..+
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 2455443322 2 111 468888887655
No 325
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=25.77 E-value=1.3e+02 Score=25.63 Aligned_cols=95 Identities=13% Similarity=0.036 Sum_probs=44.9
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCC-----------C----c-chH---HHHHhcCceeeEeeeccCCCCCC
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPT-----------W----S-NHH---NIWRDAHVTQRTFHYYHPGTKGL 181 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~-----------y----~-~y~---~~~~~~G~~~~~~~~~~~~~~~~ 181 (337)
++++|++++|-.. +..|.+ .|-.|++.+-. + . ... ..++..|.++..+.++ --
T Consensus 14 ~lVTGas~gIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~ 86 (286)
T 3uve_A 14 AFVTGAARGQGRSHAVRLAQ--EGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVD-----VR 86 (286)
T ss_dssp EEEESTTSHHHHHHHHHHHH--TTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECC-----TT
T ss_pred EEEeCCCchHHHHHHHHHHH--CCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcC-----CC
Confidence 3455555554433 345555 68888775322 1 1 111 1223346666666552 22
Q ss_pred ChHHHHHHHHc---CCCCeEEEEeCCCCCCCCC---CCCHHHHHHHHH
Q 047180 182 DFAALMDDIKN---APNGSFFLLHACAHNPTGV---DPSEEQWKEISY 223 (337)
Q Consensus 182 d~~~l~~~l~~---~~~~~~ili~~~p~NPTG~---~~s~~~~~~l~~ 223 (337)
|.+.+.+.++. .-.+.-++++|--..+.+. ..+.++|++..+
T Consensus 87 ~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 134 (286)
T 3uve_A 87 DYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMID 134 (286)
T ss_dssp CHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHH
Confidence 45555544432 1012224554433333332 357888887765
No 326
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=25.76 E-value=3e+02 Score=23.25 Aligned_cols=97 Identities=4% Similarity=-0.139 Sum_probs=45.0
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~ 197 (337)
++++||+++|-.. +..|.+ .|..|++.+-.-..... .++..|.++..+..+-. ..-+.+.+.+.+.+.. +.
T Consensus 36 ~lVTGas~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~--~~~~~~~~~~~~~~~g-~i 110 (275)
T 4imr_A 36 ALVTGSSRGIGAAIAEGLAG--AGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLS--EAGAGTDLIERAEAIA-PV 110 (275)
T ss_dssp EEETTCSSHHHHHHHHHHHH--TTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTT--STTHHHHHHHHHHHHS-CC
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCC--CHHHHHHHHHHHHHhC-CC
Confidence 3455565554433 345555 68777776443333322 33345666666655211 1112333333333221 22
Q ss_pred EEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-++++|---.+.+. ..+.++|++..+
T Consensus 111 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 111 DILVINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 34554433222222 357888877655
No 327
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=25.72 E-value=54 Score=30.87 Aligned_cols=29 Identities=14% Similarity=0.369 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-++....
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 48999999999999999999999887654
No 328
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=25.69 E-value=1.5e+02 Score=25.14 Aligned_cols=95 Identities=8% Similarity=-0.035 Sum_probs=45.3
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCC------------Ccc-hH---HHHHhcCceeeEeeeccCCCCCCChH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPT------------WSN-HH---NIWRDAHVTQRTFHYYHPGTKGLDFA 184 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~------------y~~-y~---~~~~~~G~~~~~~~~~~~~~~~~d~~ 184 (337)
++++|++++|-.. +..|.+ .|..|++.+-. -.. .. ..++..|.++..+..+ --|.+
T Consensus 14 ~lVTGas~GIG~a~a~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~ 86 (277)
T 3tsc_A 14 AFITGAARGQGRAHAVRMAA--EGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVD-----TRDFD 86 (277)
T ss_dssp EEEESTTSHHHHHHHHHHHH--TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHH
T ss_pred EEEECCccHHHHHHHHHHHH--cCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECC-----CCCHH
Confidence 3455555554333 344555 68777775320 111 11 2233456666666542 23555
Q ss_pred HHHHHHHcC---CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 185 ALMDDIKNA---PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 185 ~l~~~l~~~---~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.+.+.+.+. -.+.-++++|--..+.+. ..+.++|++..+
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 555544321 012224554433333332 467888887665
No 329
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=25.64 E-value=2.8e+02 Score=22.81 Aligned_cols=95 Identities=5% Similarity=-0.003 Sum_probs=43.4
Q ss_pred EeeccchhHHHHHH-HHHhhhCCCCeEEEcCC-CCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 122 VQSLSGTGACRLFA-DFQKRFHPDSQIYIPVP-TWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~~-~~l~~~~pgd~Vlv~~P-~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
++++|+++++-..+ ..|.+ .|..|++..- .-..... .++..|.++..++.+ --|.+.+++.++..
T Consensus 7 vlVTGas~giG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~~~~~~~~~~~~ 79 (246)
T 2uvd_A 7 ALVTGASRGIGRAIAIDLAK--QGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRAD-----VANAEDVTNMVKQTVDV 79 (246)
T ss_dssp EEETTCSSHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 34556666554433 44455 5877776532 2111222 223346566555541 22455555544321
Q ss_pred CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-.+.-++++|--..+.+. .++.++|++..+
T Consensus 80 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 80 FGQVDILVNNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp HSCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 011224554433223222 357777776544
No 330
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=25.62 E-value=2.3e+02 Score=24.03 Aligned_cols=95 Identities=13% Similarity=0.020 Sum_probs=45.8
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHH---HHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---C
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNI---WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---P 194 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~---~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~ 194 (337)
++++||+++|-.. +..|.+ .|-.|++.+-.-...... ++..|.++..+.++ --|.+.+.+.+... -
T Consensus 27 ~lVTGas~GIG~aia~~la~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 27 AFVTGVSSGIGLAVARTLAA--RGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCD-----VTSTDEVHAAVAAAVERF 99 (279)
T ss_dssp EEEESTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHHc
Confidence 3455555554433 344555 687887765433322222 23346666666541 22455555444321 0
Q ss_pred CCeEEEEeCCCCCCCC--CCCCHHHHHHHHH
Q 047180 195 NGSFFLLHACAHNPTG--VDPSEEQWKEISY 223 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG--~~~s~~~~~~l~~ 223 (337)
.+.-++++|--..+.+ ...+.++|++..+
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 1223455443333323 2367888886555
No 331
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=25.29 E-value=50 Score=31.13 Aligned_cols=30 Identities=10% Similarity=0.252 Sum_probs=26.8
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFAS 243 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~ 243 (337)
+.+++++|++-|.++|+-||.|-++.....
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 489999999999999999999999877653
No 332
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=25.19 E-value=49 Score=31.23 Aligned_cols=29 Identities=7% Similarity=0.090 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 38999999999999999999999987664
No 333
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=25.13 E-value=49 Score=31.24 Aligned_cols=29 Identities=14% Similarity=0.131 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 109 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVMNHKG 109 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccC
Confidence 37999999999999999999999987663
No 334
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=25.04 E-value=1.3e+02 Score=26.21 Aligned_cols=47 Identities=6% Similarity=0.054 Sum_probs=30.6
Q ss_pred hHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEEcccC
Q 047180 183 FAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFFDMAY 238 (337)
Q Consensus 183 ~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~De~Y 238 (337)
.+.++++++. . .+.+++.+ +|. +.++.++|.+.|+++++.++-..+.
T Consensus 78 ~~~~~ea~~~-G-i~~iVi~t-----~G~--~~~~~~~l~~~A~~~gv~liGPNc~ 124 (288)
T 2nu8_A 78 KDSILEAIDA-G-IKLIITIT-----EGI--PTLDMLTVKVKLDEAGVRMIGPNTP 124 (288)
T ss_dssp HHHHHHHHHT-T-CSEEEECC-----CCC--CHHHHHHHHHHHHHHTCEEECSSCC
T ss_pred HHHHHHHHHC-C-CCEEEEEC-----CCC--CHHHHHHHHHHHHHcCCEEEecCCc
Confidence 4556666653 2 23444433 243 6778889999999999988766643
No 335
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=24.96 E-value=1.5e+02 Score=25.24 Aligned_cols=95 Identities=4% Similarity=-0.106 Sum_probs=45.1
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcc----hHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSN----HHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~----y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
++++|++++|-.. +..|.+ .|..|++..-.-.. ....++..|.++..+..+ --|.+.+++.+++.
T Consensus 31 vlVTGas~gIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~d~~~v~~~~~~~~~~ 103 (269)
T 4dmm_A 31 ALVTGASRGIGRAIALELAA--AGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKAD-----VSQESEVEALFAAVIER 103 (269)
T ss_dssp EEETTCSSHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC-----TTSHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHH
Confidence 3455665554433 344555 68777764321111 122334456666666542 22455555444321
Q ss_pred CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-.+.-++++|--..+.+. ..+.++|++..+
T Consensus 104 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 135 (269)
T 4dmm_A 104 WGRLDVLVNNAGITRDTLLLRMKRDDWQSVLD 135 (269)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 012224554433332222 357888887655
No 336
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=24.93 E-value=54 Score=30.95 Aligned_cols=29 Identities=17% Similarity=0.378 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVPDHMG 124 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCcC
Confidence 47999999999999999999999987654
No 337
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=24.75 E-value=51 Score=30.53 Aligned_cols=30 Identities=17% Similarity=0.181 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFAS 243 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~~ 243 (337)
+.++++++++-|.++|+-||.|-++.....
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTF 102 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 689999999999999999999999987653
No 338
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=24.67 E-value=2.2e+02 Score=24.37 Aligned_cols=78 Identities=5% Similarity=-0.080 Sum_probs=39.4
Q ss_pred CeEEEcCCC-----CcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHH
Q 047180 145 SQIYIPVPT-----WSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWK 219 (337)
Q Consensus 145 d~Vlv~~P~-----y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~ 219 (337)
|.|++-.-. ...+...++..|..+. +.+ .|.++++.++.. +...++-+| | -|-++...+.+...
T Consensus 125 D~ilLi~a~l~~~~l~~l~~~a~~lGl~~l-vEv-------~~~eE~~~A~~l-~g~~iIGin-n-r~l~t~~~d~~~~~ 193 (251)
T 1i4n_A 125 DAILIIARILTAEQIKEIYEAAEELGMDSL-VEV-------HSREDLEKVFSV-IRPKIIGIN-T-RDLDTFEIKKNVLW 193 (251)
T ss_dssp SEEEEEGGGSCHHHHHHHHHHHHTTTCEEE-EEE-------CSHHHHHHHHTT-CCCSEEEEE-C-BCTTTCCBCTTHHH
T ss_pred CEEEEecccCCHHHHHHHHHHHHHcCCeEE-EEe-------CCHHHHHHHHhc-CCCCEEEEe-C-cccccCCCCHHHHH
Confidence 666655433 2223444555676532 222 246777776652 022455553 3 45566655555555
Q ss_pred HHHHHHHhcCceeEE
Q 047180 220 EISYQIKAKGHFPFF 234 (337)
Q Consensus 220 ~l~~~~~~~~~~ii~ 234 (337)
+|++.+. .+.++|+
T Consensus 194 ~l~~~ip-~~~~vIa 207 (251)
T 1i4n_A 194 ELLPLVP-DDTVVVA 207 (251)
T ss_dssp HHGGGSC-TTSEEEE
T ss_pred HHHHhCC-CCCEEEE
Confidence 5554332 3567776
No 339
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=24.43 E-value=3e+02 Score=22.79 Aligned_cols=95 Identities=11% Similarity=0.039 Sum_probs=43.5
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHh---c--C-ceeeEeeeccCCCCCCChHHHHHHHHcC-
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRD---A--H-VTQRTFHYYHPGTKGLDFAALMDDIKNA- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~---~--G-~~~~~~~~~~~~~~~~d~~~l~~~l~~~- 193 (337)
++++||+++|-.. +..|.+ .|-.|++.+-.-.......+. . + .++..++++ --|.+.+.+.+...
T Consensus 10 ~lVTGas~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~ 82 (250)
T 3nyw_A 10 AIITGASQGIGAVIAAGLAT--DGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLD-----ITDCTKADTEIKDIH 82 (250)
T ss_dssp EEEESTTSHHHHHHHHHHHH--HTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECC-----TTCHHHHHHHHHHHH
T ss_pred EEEECCCcHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEecc-----CCCHHHHHHHHHHHH
Confidence 3455665554433 344444 577887765443333333222 1 2 345555441 12455555444321
Q ss_pred --CCCeEEEEeCCCCCC-CCCCCCHHHHHHHHH
Q 047180 194 --PNGSFFLLHACAHNP-TGVDPSEEQWKEISY 223 (337)
Q Consensus 194 --~~~~~ili~~~p~NP-TG~~~s~~~~~~l~~ 223 (337)
-.+.-++++|---.+ .....+.++|++..+
T Consensus 83 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~ 115 (250)
T 3nyw_A 83 QKYGAVDILVNAAAMFMDGSLSEPVDNFRKIME 115 (250)
T ss_dssp HHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHH
T ss_pred HhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHH
Confidence 112335554433222 222456677776554
No 340
>1wcw_A Uroporphyrinogen III synthase; congenital erythropoietic porph structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} PDB: 1wd7_A 1wcx_A
Probab=24.31 E-value=53 Score=27.97 Aligned_cols=60 Identities=10% Similarity=0.049 Sum_probs=36.6
Q ss_pred CCCeEEEcCCCC-cchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC-CCCeEEEEeCCC
Q 047180 143 PDSQIYIPVPTW-SNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA-PNGSFFLLHACA 205 (337)
Q Consensus 143 pgd~Vlv~~P~y-~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~~~ili~~~p 205 (337)
.|.+|++..|.- ..+...++..|++++.+|+..-. .. |.+.+.+.+... ..-..+++ .|+
T Consensus 7 ~g~~vlvtr~~~~~~l~~~L~~~G~~~~~~P~i~i~-~~-~~~~l~~~~~~l~~~~d~iif-tS~ 68 (261)
T 1wcw_A 7 DAVRVAYAGLRRKEAFKALAEKLGFTPLLFPVQATE-KV-PVPEYRDQVRALAQGVDLFLA-TTG 68 (261)
T ss_dssp -CCEEEECCSTTHHHHHHHHHHTTCEEEECCCEEEE-EC-CGGGGHHHHHHHHTCCSEEEE-CCH
T ss_pred CCCEEEEeCCCchHHHHHHHHHCCCcEEEeccEEEe-cC-CHHHHHHHHHhhccCCCEEEE-eCH
Confidence 488999998874 34566778899999999975421 12 555555544321 12245555 444
No 341
>2fcj_A Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus} SCOP: c.136.1.1 PDB: 2i5r_A*
Probab=24.27 E-value=31 Score=26.32 Aligned_cols=28 Identities=14% Similarity=0.255 Sum_probs=23.9
Q ss_pred CCCCCHHHHHHHHHHHHhcCceeEEcccC
Q 047180 210 GVDPSEEQWKEISYQIKAKGHFPFFDMAY 238 (337)
Q Consensus 210 G~~~s~~~~~~l~~~~~~~~~~ii~De~Y 238 (337)
|. ++.+.++.|.+.++.++++|+.|-=+
T Consensus 34 Gs-i~~~~l~~I~~~~~~r~VIi~TD~D~ 61 (119)
T 2fcj_A 34 GT-ISDARLEELADELEGYDVYLLADADE 61 (119)
T ss_dssp SC-CCHHHHHHHHHHTTTSEEEEECCSSH
T ss_pred Cc-cCHHHHHHHHHHhcCCCEEEEECCCc
Confidence 45 89999999999999999999999533
No 342
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=24.18 E-value=52 Score=31.44 Aligned_cols=29 Identities=14% Similarity=0.212 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-++....
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 48999999999999999999999987664
No 343
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=24.13 E-value=2.1e+02 Score=23.73 Aligned_cols=93 Identities=8% Similarity=-0.049 Sum_probs=41.4
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---CCCe
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---PNGS 197 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~ 197 (337)
++++|+++++-.. +..|.+ .|..|++.+-.-.......+..|...+...+ -|.+.+++.++.. -.+.
T Consensus 8 vlVTGas~giG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~-------~~~~~~~~~~~~~~~~~g~i 78 (245)
T 1uls_A 8 VLITGAAHGIGRATLELFAK--EGARLVACDIEEGPLREAAEAVGAHPVVMDV-------ADPASVERGFAEALAHLGRL 78 (245)
T ss_dssp EEEESTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHTTTCEEEECCT-------TCHHHHHHHHHHHHHHHSSC
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHcCCEEEEecC-------CCHHHHHHHHHHHHHHcCCC
Confidence 3455666555433 344445 5877777543322222333334533332222 2455555544321 0112
Q ss_pred EEEEeCCCCCCCC--CCCCHHHHHHHHH
Q 047180 198 FFLLHACAHNPTG--VDPSEEQWKEISY 223 (337)
Q Consensus 198 ~ili~~~p~NPTG--~~~s~~~~~~l~~ 223 (337)
-++++|---.+.+ ...+.++|++..+
T Consensus 79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~ 106 (245)
T 1uls_A 79 DGVVHYAGITRDNFHWKMPLEDWELVLR 106 (245)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2455443222222 2357788876554
No 344
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=23.63 E-value=2.4e+02 Score=23.83 Aligned_cols=95 Identities=11% Similarity=0.035 Sum_probs=45.2
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEc-CCCCcch---HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIP-VPTWSNH---HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~-~P~y~~y---~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
++++|++++|-.. +..|.+ .|-.|++. ...-... ...++..|.++..+..+ --|.+.+++.+.+.
T Consensus 34 ~lVTGas~GIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D-----v~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 34 AFVTGGSRGIGAAIAKRLAL--EGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRAD-----NRDAEAIEQAIRETVEA 106 (271)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHH
Confidence 3445555554433 344555 68777765 2221111 22334457777766552 23555555544321
Q ss_pred CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-.+.-++++|--..+.+. ..+.++|++..+
T Consensus 107 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (271)
T 3v2g_A 107 LGGLDILVNSAGIWHSAPLEETTVADFDEVMA 138 (271)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 012234554432222222 357888887665
No 345
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=23.52 E-value=67 Score=29.84 Aligned_cols=29 Identities=17% Similarity=0.138 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-++....
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 37999999999999999999999987654
No 346
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=23.49 E-value=2.4e+02 Score=25.01 Aligned_cols=17 Identities=24% Similarity=0.223 Sum_probs=11.2
Q ss_pred CeEEEcCCCCcchHHHH
Q 047180 145 SQIYIPVPTWSNHHNIW 161 (337)
Q Consensus 145 d~Vlv~~P~y~~y~~~~ 161 (337)
|.|++.+|...-+..+.
T Consensus 69 D~V~i~tp~~~H~~~~~ 85 (352)
T 3kux_A 69 DLIVIPTPNDTHFPLAQ 85 (352)
T ss_dssp CEEEECSCTTTHHHHHH
T ss_pred CEEEEeCChHHHHHHHH
Confidence 77777777776554433
No 347
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=23.38 E-value=62 Score=28.02 Aligned_cols=69 Identities=7% Similarity=0.089 Sum_probs=38.3
Q ss_pred CceeeEeeeccCCCCCCChHHHHHHHHcC-CCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceeEE
Q 047180 165 HVTQRTFHYYHPGTKGLDFAALMDDIKNA-PNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFPFF 234 (337)
Q Consensus 165 G~~~~~~~~~~~~~~~~d~~~l~~~l~~~-~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~ii~ 234 (337)
+++++.+.+............+.+.+... ..... ++++|-..++........+++.++.+.++++++|.
T Consensus 73 ~a~l~~~kv~~~~~~~~~~~~i~~ai~~a~~~~~~-Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~ 142 (282)
T 3zxy_A 73 QCRGLIVPIFSDDRRRITQLDLARGIERAVNAGAH-IINISGGELTDFGEADGWLENAVSLCRQNNVLLVA 142 (282)
T ss_dssp TSEEEEEECSCSSSSCCCHHHHHHHHHHHHHTTCS-EEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEE
T ss_pred ccceEeeEeeccccccchHHHHHHHHHHhhccCCe-EEeccCccccccccccHHHHHHHHHHhhcCceEEE
Confidence 45666666543333444544444433321 11122 44455555555544556678888889999988886
No 348
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=23.13 E-value=1.1e+02 Score=26.96 Aligned_cols=79 Identities=9% Similarity=0.058 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHhhhCCC-CeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCC
Q 047180 128 TGACRLFADFQKRFHPD-SQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAH 206 (337)
Q Consensus 128 ~~al~~~~~~l~~~~pg-d~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~ 206 (337)
.+++.++-.+ .+ .| |.|++..|+|....+ .| + .+.+++..+. -+-++++- |+|.
T Consensus 94 ~~ai~la~~A-~~--~Gadavlv~~P~y~~~s~----~~--l--------------~~~f~~va~a-~~lPiilY-n~P~ 148 (301)
T 1xky_A 94 HASIDLTKKA-TE--VGVDAVMLVAPYYNKPSQ----EG--M--------------YQHFKAIAES-TPLPVMLY-NVPG 148 (301)
T ss_dssp HHHHHHHHHH-HH--TTCSEEEEECCCSSCCCH----HH--H--------------HHHHHHHHHT-CSSCEEEE-ECHH
T ss_pred HHHHHHHHHH-Hh--cCCCEEEEcCCCCCCCCH----HH--H--------------HHHHHHHHHh-cCCCEEEE-eCcc
Confidence 4556555433 33 34 899999998853210 00 0 1222222222 12345544 3343
Q ss_pred CCCCCCCCHHHHHHHHHHHHhcCceeEEc
Q 047180 207 NPTGVDPSEEQWKEISYQIKAKGHFPFFD 235 (337)
Q Consensus 207 NPTG~~~s~~~~~~l~~~~~~~~~~ii~D 235 (337)
-||..++.+.+.+|++ -.+++=|=|
T Consensus 149 -~tg~~l~~~~~~~La~---~pnIvgiKd 173 (301)
T 1xky_A 149 -RSIVQISVDTVVRLSE---IENIVAIKD 173 (301)
T ss_dssp -HHSSCCCHHHHHHHHT---STTEEEEEE
T ss_pred -ccCCCCCHHHHHHHHc---CCCEEEEEc
Confidence 3899999888887764 234444444
No 349
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=23.12 E-value=4.5e+02 Score=24.27 Aligned_cols=13 Identities=0% Similarity=-0.041 Sum_probs=10.4
Q ss_pred CCCHHHHHHHHHH
Q 047180 212 DPSEEQWKEISYQ 224 (337)
Q Consensus 212 ~~s~~~~~~l~~~ 224 (337)
.++.++|++.+++
T Consensus 189 ~~t~ee~~~~v~V 201 (405)
T 3zu3_A 189 PATQSEIDSTVAV 201 (405)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHh
Confidence 4789999988764
No 350
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=22.83 E-value=4.4e+02 Score=24.13 Aligned_cols=89 Identities=10% Similarity=0.054 Sum_probs=60.1
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+.+..+.....+ -.-.++.+|....-...+...|..+..++-. .-.|++-|++.-. . .++ |++-
T Consensus 101 e~~~~L~~~~~~---~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~----~~~N~pLL~~va~-~-gKP-ViLS------ 164 (385)
T 1vli_A 101 EWILPLLDYCRE---KQVIFLSTVCDEGSADLLQSTSPSAFKIASY----EINHLPLLKYVAR-L-NRP-MIFS------ 164 (385)
T ss_dssp GGHHHHHHHHHH---TTCEEECBCCSHHHHHHHHTTCCSCEEECGG----GTTCHHHHHHHHT-T-CSC-EEEE------
T ss_pred HHHHHHHHHHHH---cCCcEEEccCCHHHHHHHHhcCCCEEEECcc----cccCHHHHHHHHh-c-CCe-EEEE------
Confidence 444555555544 3578888898888888888888888888753 2346666665433 2 233 4442
Q ss_pred CCCCCCHHHHHHHHHHHHhc---CceeEE
Q 047180 209 TGVDPSEEQWKEISYQIKAK---GHFPFF 234 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~---~~~ii~ 234 (337)
||.. |.+||+..++.+.+. +++|+.
T Consensus 165 tGma-Tl~Ei~~Ave~i~~~Gn~~iiLlh 192 (385)
T 1vli_A 165 TAGA-EISDVHEAWRTIRAEGNNQIAIMH 192 (385)
T ss_dssp CTTC-CHHHHHHHHHHHHTTTCCCEEEEE
T ss_pred CCCC-CHHHHHHHHHHHHHCCCCcEEEEe
Confidence 8986 999999999999985 455543
No 351
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=22.81 E-value=2.9e+02 Score=23.23 Aligned_cols=95 Identities=6% Similarity=0.009 Sum_probs=44.2
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHH----HhcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIW----RDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~----~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
++++|+++++-.. +..|.+ .|-.|++.+-.-....... +..|.++..+..+ --|.+.+.+.+...
T Consensus 24 ~lVTGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D-----l~~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 24 ALVTGGSRGLGFGIAQGLAE--AGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCD-----VSNYEEVKKLLEAVKEK 96 (267)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 3455665555433 344555 6877777654322222222 2236666655541 22455555544321
Q ss_pred CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-.+.-++++|-...+.+. ..+.++|+++.+
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 128 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIE 128 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 011224554432222222 357788877654
No 352
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=22.62 E-value=56 Score=30.86 Aligned_cols=28 Identities=14% Similarity=0.167 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 215 EEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 215 ~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
.+++++|++-|.++|+-||.|-++....
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 6899999999999999999999887654
No 353
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=22.34 E-value=53 Score=23.23 Aligned_cols=22 Identities=9% Similarity=-0.148 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHhcCceeEEccc
Q 047180 216 EQWKEISYQIKAKGHFPFFDMA 237 (337)
Q Consensus 216 ~~~~~l~~~~~~~~~~ii~De~ 237 (337)
..-++|.++|+++|+.|++|..
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHH
Confidence 4457888999999999999963
No 354
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=22.28 E-value=3.4e+02 Score=22.57 Aligned_cols=94 Identities=5% Similarity=-0.059 Sum_probs=45.5
Q ss_pred EeeccchhHHHHHH-HHHhhhCCCCeEEEcCCCCcchHHH---HHhcCceeeEeeeccCCCCCCChHHHHHHHHcC----
Q 047180 122 VQSLSGTGACRLFA-DFQKRFHPDSQIYIPVPTWSNHHNI---WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~~-~~l~~~~pgd~Vlv~~P~y~~y~~~---~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---- 193 (337)
++++||++++-..+ ..|.+ .|..|++.+-.-...... ++..|.++..+.++ --|.+.+.+.+...
T Consensus 32 vlITGas~gIG~~la~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 32 AVVTGASRGIGAAIARKLGS--LGARVVLTARDVEKLRAVEREIVAAGGEAESHACD-----LSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp EEESSTTSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEec-----CCCHHHHHHHHHHHHHhc
Confidence 44556655554333 44444 587787765544333322 23346666665542 12455555444321
Q ss_pred CCCeEEEEeCCCC-CCCCC--CCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAH-NPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~-NPTG~--~~s~~~~~~l~~ 223 (337)
..-. ++++|-.. .+.|. ..+.++|++..+
T Consensus 105 g~id-~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 105 GRCD-VLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp SCCS-EEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred CCCC-EEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 1222 44444322 23332 367788876544
No 355
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=22.27 E-value=2.5e+02 Score=23.60 Aligned_cols=29 Identities=10% Similarity=-0.018 Sum_probs=16.3
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCC
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVP 152 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P 152 (337)
++++|+++++-.. +..|.+ .|-.|++.+-
T Consensus 9 vlVTGas~gIG~~ia~~l~~--~G~~V~~~~r 38 (278)
T 1spx_A 9 AIITGSSNGIGRATAVLFAR--EGAKVTITGR 38 (278)
T ss_dssp EEETTTTSHHHHHHHHHHHH--TTCEEEEEES
T ss_pred EEEeCCCchHHHHHHHHHHH--CCCEEEEEeC
Confidence 4555666655433 344445 5877777543
No 356
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=22.24 E-value=3.1e+02 Score=23.84 Aligned_cols=95 Identities=13% Similarity=0.031 Sum_probs=45.3
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCC-------C----c-ch---HHHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPT-------W----S-NH---HNIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~-------y----~-~y---~~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
++++|++++|-.. +..|.+ .|..|++.+-. + . .. ...++..|.++..+..+ --|.+.
T Consensus 49 ~lVTGas~GIG~aia~~la~--~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~d~~~ 121 (317)
T 3oec_A 49 AFITGAARGQGRTHAVRLAQ--DGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQAD-----VRDLAS 121 (317)
T ss_dssp EEESSCSSHHHHHHHHHHHH--TTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHH
T ss_pred EEEeCCCcHHHHHHHHHHHH--CCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECC-----CCCHHH
Confidence 3455665554433 345555 68777775322 1 1 11 12233456677666552 224555
Q ss_pred HHHHHHcC---CCCeEEEEeCCCCCCCC--CCCCHHHHHHHHH
Q 047180 186 LMDDIKNA---PNGSFFLLHACAHNPTG--VDPSEEQWKEISY 223 (337)
Q Consensus 186 l~~~l~~~---~~~~~ili~~~p~NPTG--~~~s~~~~~~l~~ 223 (337)
+++.++.. -.+.-++|+|--..+.+ ..++.++|+++.+
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 55544321 01222455443323223 2468888887665
No 357
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=22.17 E-value=73 Score=31.01 Aligned_cols=29 Identities=17% Similarity=0.247 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-+|..+.
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 37999999999999999999999998765
No 358
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=22.16 E-value=52 Score=28.64 Aligned_cols=60 Identities=2% Similarity=-0.079 Sum_probs=37.3
Q ss_pred CCCeEEEcCCC--C----cchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCC
Q 047180 143 PDSQIYIPVPT--W----SNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACA 205 (337)
Q Consensus 143 pgd~Vlv~~P~--y----~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p 205 (337)
.|-+|++..|. . ..+...++..|++++.+|+..-. ..+.+.+.+.+.....-..+++ .|+
T Consensus 20 ~g~~vlvtr~~~~~~~~~~~l~~~L~~~G~~~~~~P~i~i~--~~~~~~l~~~l~~~~~~d~lif-TS~ 85 (286)
T 1jr2_A 20 RHMKVLLLKDAKEDDCGQDPYIRELGLYGLEATLIPVLSFE--FLSLPSFSEKLSHPEDYGGLIF-TSP 85 (286)
T ss_dssp --CEEEEEESSCCCBTTBCHHHHHHHTTTCEEEEEECEEEE--ECCHHHHHHHHTCGGGCSEEEE-CCH
T ss_pred cCCEEEEEcCCCCCCCCCcHHHHHHHHCCCceEEEeeEEEe--cCCHHHHHHHHhCcccccEEEE-eCH
Confidence 47789888775 2 66888999999999999975421 1345566666642222245555 443
No 359
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=22.13 E-value=69 Score=31.14 Aligned_cols=29 Identities=7% Similarity=0.171 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-+|..+.
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 47999999999999999999999998765
No 360
>2cc0_A Acetyl-xylan esterase; hydrolase, carbohydrate esterase; 1.6A {Streptomyces lividans} SCOP: c.6.2.3
Probab=21.81 E-value=1.7e+02 Score=23.59 Aligned_cols=67 Identities=13% Similarity=0.184 Sum_probs=41.0
Q ss_pred HHHHhcCceeeEeeeccCCCC-CCChHHHHHHHHcCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCcee
Q 047180 159 NIWRDAHVTQRTFHYYHPGTK-GLDFAALMDDIKNAPNGSFFLLHACAHNPTGVDPSEEQWKEISYQIKAKGHFP 232 (337)
Q Consensus 159 ~~~~~~G~~~~~~~~~~~~~~-~~d~~~l~~~l~~~~~~~~ili~~~p~NPTG~~~s~~~~~~l~~~~~~~~~~i 232 (337)
..++..|.+++...+ +..+| ..+.+.+.+.+....+..++++...+ .-+.+-+.+|++.++++|.-+
T Consensus 112 ~~~~~~G~~~v~w~~-d~~Dw~~~~~~~i~~~~~~~~~g~IiL~Hd~~------~~t~~al~~ii~~l~~~Gy~~ 179 (195)
T 2cc0_A 112 SVEAKYGLTEVIWDV-DSQDWNNASTDAIVQAVSRLGNGQVILMHDWP------ANTLAAIPRIAQTLAGKGLCS 179 (195)
T ss_dssp HHHHHTTCEECCCSE-ECCGGGTCCHHHHHHHHHTCCTTCEEEEESSC------HHHHHHHHHHHHHHHHTTEEE
T ss_pred HHHHHCCCeEEEecc-CCCccCCCCHHHHHHHHhCcCcCeEEEECCCc------hhHHHHHHHHHHHHHHCCCEE
Confidence 355667877766554 22233 24566776666554455677765322 125678899999999887543
No 361
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=21.77 E-value=3.3e+02 Score=22.73 Aligned_cols=95 Identities=8% Similarity=0.002 Sum_probs=44.4
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHHHHh----cCc-eeeEeeeccCCCCCCChHHHHHHHHcC--
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNIWRD----AHV-TQRTFHYYHPGTKGLDFAALMDDIKNA-- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~----~G~-~~~~~~~~~~~~~~~d~~~l~~~l~~~-- 193 (337)
++++|++++|-.. +..|.+ .|..|++.+-.-.......+. .+. ++..+..+ --|.+.+.+.++..
T Consensus 11 ~lVTGas~GIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~ 83 (265)
T 3lf2_A 11 AVVTGGSSGIGLATVELLLE--AGAAVAFCARDGERLRAAESALRQRFPGARLFASVCD-----VLDALQVRAFAEACER 83 (265)
T ss_dssp EEEETCSSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECC-----TTCHHHHHHHHHHHHH
T ss_pred EEEeCCCChHHHHHHHHHHH--CCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCC-----CCCHHHHHHHHHHHHH
Confidence 3445555554333 344555 688887765443333322221 333 35555441 22445544443321
Q ss_pred -CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 194 -PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 -~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-.+.-++++|-.-.+.+. ..+.++|++..+
T Consensus 84 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 116 (265)
T 3lf2_A 84 TLGCASILVNNAGQGRVSTFAETTDEAWSEELQ 116 (265)
T ss_dssp HHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 012224554433333332 467888887665
No 362
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=21.67 E-value=3.1e+02 Score=23.02 Aligned_cols=93 Identities=8% Similarity=-0.008 Sum_probs=43.8
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCC-------Cc-----chH---HHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPT-------WS-----NHH---NIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~-------y~-----~y~---~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
++++|++++|-.. +..|.+ .|-.|++.+-. |+ ... ..++..|.++..+..+ --|.+.
T Consensus 16 vlVTGas~gIG~~ia~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----~~~~~~ 88 (278)
T 3sx2_A 16 AFITGAARGQGRAHAVRLAA--DGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQAD-----VRDRES 88 (278)
T ss_dssp EEEESTTSHHHHHHHHHHHH--TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECC-----TTCHHH
T ss_pred EEEECCCChHHHHHHHHHHH--CCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCC-----CCCHHH
Confidence 3455555554433 344455 68777765422 11 111 2233456666666552 225555
Q ss_pred HHHHHHcC---CCCeEEEEeCCCCCCCCCCCCHHHHHHHHH
Q 047180 186 LMDDIKNA---PNGSFFLLHACAHNPTGVDPSEEQWKEISY 223 (337)
Q Consensus 186 l~~~l~~~---~~~~~ili~~~p~NPTG~~~s~~~~~~l~~ 223 (337)
+++.+++. -.+.-++++|--..+.+. +.++|++..+
T Consensus 89 v~~~~~~~~~~~g~id~lv~nAg~~~~~~--~~~~~~~~~~ 127 (278)
T 3sx2_A 89 LSAALQAGLDELGRLDIVVANAGIAPMSA--GDDGWHDVID 127 (278)
T ss_dssp HHHHHHHHHHHHCCCCEEEECCCCCCCSS--THHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCC--CHHHHHHHHH
Confidence 55544321 012234554433333332 5788877655
No 363
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=21.63 E-value=4.5e+02 Score=23.72 Aligned_cols=88 Identities=11% Similarity=0.057 Sum_probs=54.7
Q ss_pred hHHHHHHHHHhhhCCCCeEEEcCCCCcchHHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcCCCCeEEEEeCCCCCC
Q 047180 129 GACRLFADFQKRFHPDSQIYIPVPTWSNHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNAPNGSFFLLHACAHNP 208 (337)
Q Consensus 129 ~al~~~~~~l~~~~pgd~Vlv~~P~y~~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ili~~~p~NP 208 (337)
+.+..+.....+ -+-.++.+|........+...|..+..++-. .-.|++-|++.-. . .+++ ++-
T Consensus 91 e~~~~L~~~~~~---~Gi~~~st~~d~~svd~l~~~~v~~~KI~S~----~~~n~~LL~~va~-~-gkPv-iLs------ 154 (349)
T 2wqp_A 91 EDEIKLKEYVES---KGMIFISTLFSRAAALRLQRMDIPAYKIGSG----ECNNYPLIKLVAS-F-GKPI-ILS------ 154 (349)
T ss_dssp HHHHHHHHHHHH---TTCEEEEEECSHHHHHHHHHHTCSCEEECGG----GTTCHHHHHHHHT-T-CSCE-EEE------
T ss_pred HHHHHHHHHHHH---hCCeEEEeeCCHHHHHHHHhcCCCEEEECcc----cccCHHHHHHHHh-c-CCeE-EEE------
Confidence 444444444444 3467777787777777777777787777642 2345665555432 2 2233 332
Q ss_pred CCCCCCHHHHHHHHHHHHhcC--ceeE
Q 047180 209 TGVDPSEEQWKEISYQIKAKG--HFPF 233 (337)
Q Consensus 209 TG~~~s~~~~~~l~~~~~~~~--~~ii 233 (337)
||.. |.+||+..++.+.+.| ++|+
T Consensus 155 tGma-t~~Ei~~Ave~i~~~G~~iiLl 180 (349)
T 2wqp_A 155 TGMN-SIESIKKSVEIIREAGVPYALL 180 (349)
T ss_dssp CTTC-CHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCC-CHHHHHHHHHHHHHcCCCEEEE
Confidence 7886 8888988888888753 5554
No 364
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=21.63 E-value=3.7e+02 Score=22.70 Aligned_cols=94 Identities=5% Similarity=0.016 Sum_probs=42.1
Q ss_pred EeeccchhHHHHHH-HHHhhhCCCCeEEEcCCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---C
Q 047180 122 VQSLSGTGACRLFA-DFQKRFHPDSQIYIPVPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---P 194 (337)
Q Consensus 122 ~~t~g~~~al~~~~-~~l~~~~pgd~Vlv~~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~ 194 (337)
++++|+++++-..+ ..|.+ .|..|++.+-.-..... .++..|.++..+.. | --|.+.+++.++.. -
T Consensus 47 vlITGasggIG~~la~~L~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~-D----l~d~~~v~~~~~~~~~~~ 119 (285)
T 2c07_A 47 ALVTGAGRGIGREIAKMLAK--SVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG-D----VSKKEEISEVINKILTEH 119 (285)
T ss_dssp EEEESTTSHHHHHHHHHHTT--TSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEEC-C----TTCHHHHHHHHHHHHHHC
T ss_pred EEEECCCcHHHHHHHHHHHH--cCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEEC-C----CCCHHHHHHHHHHHHHhc
Confidence 34556666654433 44444 57777774322111222 22233656665554 1 23556665554321 1
Q ss_pred CCeEEEEeCCCCCCCC--CCCCHHHHHHHH
Q 047180 195 NGSFFLLHACAHNPTG--VDPSEEQWKEIS 222 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG--~~~s~~~~~~l~ 222 (337)
.+.-++++|---.+.+ ...+.+++++..
T Consensus 120 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~ 149 (285)
T 2c07_A 120 KNVDILVNNAGITRDNLFLRMKNDEWEDVL 149 (285)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHH
Confidence 1222444443222222 235677776543
No 365
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=21.57 E-value=26 Score=32.90 Aligned_cols=14 Identities=7% Similarity=0.093 Sum_probs=7.0
Q ss_pred CCCCHHHHHHHHHH
Q 047180 92 MGGSVKMVEETLKL 105 (337)
Q Consensus 92 ~~G~~~lr~aia~~ 105 (337)
..|...+--++..+
T Consensus 98 ~sGt~Ai~~al~al 111 (427)
T 3i16_A 98 VNGTHALGAALFGN 111 (427)
T ss_dssp CSHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH
Confidence 34665554444443
No 366
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=21.45 E-value=3.6e+02 Score=22.61 Aligned_cols=95 Identities=14% Similarity=0.033 Sum_probs=45.6
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCC-------C----c-c---hHHHHHhcCceeeEeeeccCCCCCCChHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPT-------W----S-N---HHNIWRDAHVTQRTFHYYHPGTKGLDFAA 185 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~-------y----~-~---y~~~~~~~G~~~~~~~~~~~~~~~~d~~~ 185 (337)
++++|++++|-.. +..|.+ .|-.|++.+-. | . . ....++..|.++..+.++ --|.+.
T Consensus 13 ~lVTGas~gIG~a~a~~l~~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~ 85 (281)
T 3s55_A 13 ALITGGARGMGRSHAVALAE--AGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVD-----VKDRAA 85 (281)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHH
T ss_pred EEEeCCCchHHHHHHHHHHH--CCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCC-----CCCHHH
Confidence 3455665555433 345555 68777775432 1 0 1 112234456676666552 224555
Q ss_pred HHHHHHcC---CCCeEEEEeCCCCCCCC--CCCCHHHHHHHHH
Q 047180 186 LMDDIKNA---PNGSFFLLHACAHNPTG--VDPSEEQWKEISY 223 (337)
Q Consensus 186 l~~~l~~~---~~~~~ili~~~p~NPTG--~~~s~~~~~~l~~ 223 (337)
+++.+++. -.+.-++++|--..+.+ ...+.++|++..+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 55544321 01122455443333323 3468888887655
No 367
>1f2d_A 1-aminocyclopropane-1-carboxylate deaminase; carbon-carbon L open twisted alpha/beta, lyase; HET: PLP; 2.00A {Williopsis saturnus} SCOP: c.79.1.1 PDB: 1j0e_A* 1j0d_A* 1j0c_A*
Probab=21.37 E-value=4.2e+02 Score=23.30 Aligned_cols=17 Identities=12% Similarity=0.004 Sum_probs=13.6
Q ss_pred hHHHHHhcCceeeEeee
Q 047180 157 HHNIWRDAHVTQRTFHY 173 (337)
Q Consensus 157 y~~~~~~~G~~~~~~~~ 173 (337)
-...++..|++++.++-
T Consensus 118 k~~~~~~~GA~v~~~~~ 134 (341)
T 1f2d_A 118 NIELSRIMGADVRVIED 134 (341)
T ss_dssp HHHHHHHTTCEEEECCC
T ss_pred cHHHHHhCCCEEEEeCC
Confidence 56788899999998763
No 368
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=21.37 E-value=2.7e+02 Score=23.48 Aligned_cols=95 Identities=12% Similarity=-0.043 Sum_probs=45.2
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEc-CCCCcch---HHHHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIP-VPTWSNH---HNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~-~P~y~~y---~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
++++|++++|-.. +..|.+ .|..|++. .-.-..- ...++..|.++..+.++ --|.+.+++.++..
T Consensus 30 ~lVTGas~GIG~aia~~la~--~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----l~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 30 AIVTGASRGIGAAIAARLAS--DGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQAD-----VSDPAAVRRLFATAEEA 102 (267)
T ss_dssp EEEESCSSHHHHHHHHHHHH--HTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred EEEeCCCCHHHHHHHHHHHH--CCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 3445555554433 344444 58777764 2222212 22334456676666542 12455555544321
Q ss_pred CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
-.+.-++++|---.+.+. ..+.++|++..+
T Consensus 103 ~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 134 (267)
T 3u5t_A 103 FGGVDVLVNNAGIMPLTTIAETGDAVFDRVIA 134 (267)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 112345665433333332 367788886554
No 369
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=21.34 E-value=78 Score=30.53 Aligned_cols=29 Identities=14% Similarity=0.260 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 78 t~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 78 TMEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 47999999999999999999999987764
No 370
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=21.09 E-value=67 Score=29.91 Aligned_cols=29 Identities=14% Similarity=0.280 Sum_probs=25.8
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
+.+++++|++-|.++|+-||.|-++....
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 58999999999999999999999876554
No 371
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=21.09 E-value=3.6e+02 Score=22.42 Aligned_cols=95 Identities=8% Similarity=-0.037 Sum_probs=46.2
Q ss_pred EeeccchhHHHH-HHHHHhhhCCCCeEEEc-CCCCcchHH---HHHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---
Q 047180 122 VQSLSGTGACRL-FADFQKRFHPDSQIYIP-VPTWSNHHN---IWRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA--- 193 (337)
Q Consensus 122 ~~t~g~~~al~~-~~~~l~~~~pgd~Vlv~-~P~y~~y~~---~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~--- 193 (337)
++++|++++|-. ++..|.+ .|-.|++. ...-..... .++..|.++..+..+ --|.+.+++.+++.
T Consensus 11 vlVTGas~GIG~aia~~la~--~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~~v~~~~~~~~~~ 83 (259)
T 3edm_A 11 IVVAGAGRDIGRACAIRFAQ--EGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKAD-----LTNAAEVEAAISAAADK 83 (259)
T ss_dssp EEEETTTSHHHHHHHHHHHH--TTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECC-----TTCHHHHHHHHHHHHHH
T ss_pred EEEECCCchHHHHHHHHHHH--CCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcC-----CCCHHHHHHHHHHHHHH
Confidence 344555555433 3344555 68777775 433332222 233456666666542 22455555544321
Q ss_pred CCCeEEEEeCCCCC-CCC--CCCCHHHHHHHHH
Q 047180 194 PNGSFFLLHACAHN-PTG--VDPSEEQWKEISY 223 (337)
Q Consensus 194 ~~~~~ili~~~p~N-PTG--~~~s~~~~~~l~~ 223 (337)
-.+.-++++|--.. +.+ ...+.++|++..+
T Consensus 84 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 116 (259)
T 3edm_A 84 FGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLD 116 (259)
T ss_dssp HCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred hCCCCEEEECCCccCCCCChhhCCHHHHHHHHH
Confidence 11234555443222 222 2568888887765
No 372
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=20.92 E-value=3.5e+02 Score=22.25 Aligned_cols=95 Identities=9% Similarity=0.051 Sum_probs=43.5
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCcchHHH---HHhcCceeeEeeeccCCCCCCChHHHHHHHHcC---C
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWSNHHNI---WRDAHVTQRTFHYYHPGTKGLDFAALMDDIKNA---P 194 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~~y~~~---~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~ 194 (337)
++++|+++++-.. +..|.+ .|-.|++.+-.-...... ++..|.++..+..+ --|.+.+++.++.. -
T Consensus 10 ~lVTGas~gIG~aia~~l~~--~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D-----v~~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 10 ALITGASSGIGEATARALAA--EGAAVAIAARRVEKLRALGDELTAAGAKVHVLELD-----VADRQGVDAAVASTVEAL 82 (247)
T ss_dssp EEEESCSSHHHHHHHHHHHH--TTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC-----TTCHHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHH--CCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECC-----CCCHHHHHHHHHHHHHHc
Confidence 3445665554433 344555 587777654322222222 22235566555541 22455555544321 0
Q ss_pred CCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 195 NGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 195 ~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.+.-++++|--..+.|. ..+.++|+++.+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 11224554433333332 357788876554
No 373
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=20.74 E-value=1.9e+02 Score=24.52 Aligned_cols=95 Identities=13% Similarity=-0.051 Sum_probs=44.8
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCC------------Ccc----hHHHHHhcCceeeEeeeccCCCCCCChH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPT------------WSN----HHNIWRDAHVTQRTFHYYHPGTKGLDFA 184 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~------------y~~----y~~~~~~~G~~~~~~~~~~~~~~~~d~~ 184 (337)
++++|++++|-.. +..|.+ .|-.|++.+-. -.. ....++..|.++..+.++ --|.+
T Consensus 18 ~lVTGas~gIG~a~a~~la~--~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D-----v~~~~ 90 (280)
T 3pgx_A 18 AFITGAARGQGRSHAVRLAA--EGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLD-----VRDDA 90 (280)
T ss_dssp EEEESTTSHHHHHHHHHHHH--TTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECC-----TTCHH
T ss_pred EEEECCCcHHHHHHHHHHHH--CCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcC-----CCCHH
Confidence 3455555554433 344555 68888775421 111 112234456666666542 22455
Q ss_pred HHHHHHHcC---CCCeEEEEeCCCCCCCCC--CCCHHHHHHHHH
Q 047180 185 ALMDDIKNA---PNGSFFLLHACAHNPTGV--DPSEEQWKEISY 223 (337)
Q Consensus 185 ~l~~~l~~~---~~~~~ili~~~p~NPTG~--~~s~~~~~~l~~ 223 (337)
.+++.+.+. -.+.-++++|---.+.+. .++.++|++..+
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIG 134 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHh
Confidence 555544321 012234554433233232 358888887554
No 374
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=20.72 E-value=4.4e+02 Score=23.29 Aligned_cols=95 Identities=11% Similarity=-0.036 Sum_probs=47.2
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCCc----------chHHHHHhcCceeeEeeeccCCCCCCChHHHHHHH
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTWS----------NHHNIWRDAHVTQRTFHYYHPGTKGLDFAALMDDI 190 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y~----------~y~~~~~~~G~~~~~~~~~~~~~~~~d~~~l~~~l 190 (337)
++++|++++|-.. +..|.+ .|-.|++.+-.-. .....++..|.++..+.++ --|.+.+++.+
T Consensus 48 vlVTGas~GIG~aia~~La~--~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~D-----v~d~~~v~~~~ 120 (346)
T 3kvo_A 48 VFITGASRGIGKAIALKAAK--DGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVD-----VRDEQQISAAV 120 (346)
T ss_dssp EEEETTTSHHHHHHHHHHHT--TTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECC-----TTCHHHHHHHH
T ss_pred EEEeCCChHHHHHHHHHHHH--CCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEcc-----CCCHHHHHHHH
Confidence 4555666555433 344444 5777776543322 1233445567777776552 22555555544
Q ss_pred HcC---CCCeEEEEeCCCCCCCC--CCCCHHHHHHHHH
Q 047180 191 KNA---PNGSFFLLHACAHNPTG--VDPSEEQWKEISY 223 (337)
Q Consensus 191 ~~~---~~~~~ili~~~p~NPTG--~~~s~~~~~~l~~ 223 (337)
++. -.+.-++|+|---.+.+ ...+.++|+++.+
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 321 01223455443322222 3467788877655
No 375
>1m53_A Isomaltulose synthase; klebsiella SP. LX3, sucrose isomerization, isomerase; 2.20A {Klebsiella SP} SCOP: b.71.1.1 c.1.8.1
Probab=20.53 E-value=83 Score=30.46 Aligned_cols=29 Identities=10% Similarity=0.205 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 91 t~~df~~lv~~aH~~Gi~VilD~V~NH~s 119 (570)
T 1m53_A 91 TMEDFDSLVAEMKKRNMRLMIDVVINHTS 119 (570)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 47999999999999999999999987764
No 376
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=20.47 E-value=2.6e+02 Score=23.69 Aligned_cols=50 Identities=6% Similarity=-0.100 Sum_probs=24.0
Q ss_pred EeeccchhHHHHH-HHHHhhhCCCCeEEEcCCCC-cchHHH---HH-hcCceeeEeee
Q 047180 122 VQSLSGTGACRLF-ADFQKRFHPDSQIYIPVPTW-SNHHNI---WR-DAHVTQRTFHY 173 (337)
Q Consensus 122 ~~t~g~~~al~~~-~~~l~~~~pgd~Vlv~~P~y-~~y~~~---~~-~~G~~~~~~~~ 173 (337)
++++|++++|-.. +..|.+ .|..|++.+-.- ...... ++ ..|.++..+..
T Consensus 26 ~lVTGas~gIG~aia~~L~~--~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~ 81 (288)
T 2x9g_A 26 AVVTGAAKRIGRAIAVKLHQ--TGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQA 81 (288)
T ss_dssp EEETTCSSHHHHHHHHHHHH--HTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEEC
T ss_pred EEEeCCCCHHHHHHHHHHHH--CCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEe
Confidence 3455666555433 344444 477777654332 222222 22 34556665554
No 377
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=20.33 E-value=28 Score=32.60 Aligned_cols=13 Identities=8% Similarity=0.169 Sum_probs=6.0
Q ss_pred CCCCHHHHHHHHH
Q 047180 92 MGGSVKMVEETLK 104 (337)
Q Consensus 92 ~~G~~~lr~aia~ 104 (337)
..|...+--++..
T Consensus 99 ~sGt~A~~~al~a 111 (427)
T 3hvy_A 99 VNGTHAIGAALFG 111 (427)
T ss_dssp CSHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHH
Confidence 3465554433333
No 378
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=20.23 E-value=79 Score=28.60 Aligned_cols=76 Identities=14% Similarity=0.172 Sum_probs=0.0
Q ss_pred HHHHHhcCceeeEeeeccCCCCCCC-hHHHHHHHHcCCCCeEEEEeCCCCCCCC------CCCCHHHHHHHHHHHHhc-C
Q 047180 158 HNIWRDAHVTQRTFHYYHPGTKGLD-FAALMDDIKNAPNGSFFLLHACAHNPTG------VDPSEEQWKEISYQIKAK-G 229 (337)
Q Consensus 158 ~~~~~~~G~~~~~~~~~~~~~~~~d-~~~l~~~l~~~~~~~~ili~~~p~NPTG------~~~s~~~~~~l~~~~~~~-~ 229 (337)
...++..|+.++.+|+.....+.-+ ++.+.+.+..+.+..+.+|+. .|+.+| ..-..+.|++|++-.+.+ .
T Consensus 60 i~~lk~~G~N~VRip~~~~~~~~~~~l~~ld~~v~~a~~~GiyVIlD-lH~~~g~~~~~~~~~~~~~w~~iA~ryk~~~~ 138 (345)
T 3jug_A 60 IPAIAEQGANTIRIVLSDGGQWEKDDIDTVREVIELAEQNKMVAVVE-VHDATGRDSRSDLDRAVDYWIEMKDALIGKED 138 (345)
T ss_dssp HHHHHHTTCSEEEEEECCSSSSCCCCHHHHHHHHHHHHTTTCEEEEE-ECTTTTCCCHHHHHHHHHHHHHTHHHHTTCTT
T ss_pred HHHHHHcCCCEEEEEecCCCccCHHHHHHHHHHHHHHHHCCCEEEEE-eccCCCCCcHHHHHHHHHHHHHHHHHHcCCCC
Q ss_pred ceeEE
Q 047180 230 HFPFF 234 (337)
Q Consensus 230 ~~ii~ 234 (337)
.++++
T Consensus 139 ~Vi~e 143 (345)
T 3jug_A 139 TVIIN 143 (345)
T ss_dssp TEEEE
T ss_pred eEEEE
No 379
>1uok_A Oligo-1,6-glucosidase; sugar degradation, hydrolase, TIM-barrel glycosidase; 2.00A {Bacillus cereus} SCOP: b.71.1.1 c.1.8.1
Probab=20.02 E-value=87 Score=30.21 Aligned_cols=29 Identities=14% Similarity=0.343 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhcCceeEEcccCCCCC
Q 047180 214 SEEQWKEISYQIKAKGHFPFFDMAYQGFA 242 (337)
Q Consensus 214 s~~~~~~l~~~~~~~~~~ii~De~Y~~~~ 242 (337)
|.+++++|++-|.++|+-||.|-++....
T Consensus 77 t~~df~~lv~~~h~~Gi~VilD~V~NH~s 105 (558)
T 1uok_A 77 TMEDWDELLHEMHERNMKLMMDLVVNHTS 105 (558)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 47999999999999999999999987654
Done!