Query 047182
Match_columns 207
No_of_seqs 123 out of 734
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 14:49:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047182.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047182hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1xhn_A CREG, cellular represso 100.0 3.1E-39 1.1E-43 262.0 15.2 167 38-206 12-182 (184)
2 3dnh_A Uncharacterized protein 100.0 8.8E-36 3E-40 254.0 14.3 153 37-204 20-174 (258)
3 3gas_A Heme oxygenase; FMN-bin 100.0 8.3E-34 2.8E-38 241.9 15.2 149 44-205 86-238 (259)
4 3swj_A CHUZ, putative uncharac 100.0 1.7E-33 6E-38 239.0 16.3 153 41-206 83-239 (251)
5 2arz_A Hypothetical protein PA 100.0 1.6E-31 5.4E-36 225.2 18.9 154 39-205 2-155 (247)
6 3tgv_A Heme-binding protein HU 100.0 6.2E-32 2.1E-36 212.2 10.8 136 46-193 4-140 (148)
7 1vl7_A Hypothetical protein AL 100.0 6.9E-29 2.3E-33 195.7 10.7 144 39-193 13-157 (157)
8 2hq7_A Protein, related to gen 99.8 6.8E-20 2.3E-24 141.1 11.5 139 43-204 5-145 (146)
9 2iab_A Hypothetical protein; N 99.8 6.1E-19 2.1E-23 138.7 12.0 136 39-200 7-143 (155)
10 2asf_A Hypothetical protein RV 99.8 7.2E-18 2.5E-22 129.3 16.5 121 46-190 11-132 (137)
11 2i02_A General stress protein 99.8 4.3E-18 1.5E-22 131.7 14.6 130 42-192 8-139 (148)
12 3ec6_A General stress protein 99.8 1.1E-17 3.6E-22 128.6 14.9 130 44-197 3-137 (139)
13 3db0_A LIN2891 protein; putati 99.8 4.9E-18 1.7E-22 128.4 12.7 122 45-189 6-127 (128)
14 2re7_A Uncharacterized protein 99.8 1.2E-17 4.2E-22 126.9 13.1 125 44-190 6-133 (134)
15 2fhq_A Putative general stress 99.7 2E-17 6.8E-22 126.5 13.6 123 44-190 8-132 (141)
16 3f7e_A Pyridoxamine 5'-phospha 99.7 3.7E-17 1.3E-21 124.2 13.0 120 47-186 6-127 (131)
17 1rfe_A Hypothetical protein RV 99.7 5.9E-17 2E-21 126.8 13.0 128 46-190 12-146 (162)
18 3u5w_A Putative uncharacterize 99.7 6.7E-17 2.3E-21 126.3 12.9 120 46-186 12-143 (148)
19 2hhz_A Pyridoxamine 5'-phospha 99.7 3.9E-16 1.3E-20 121.3 14.2 126 46-193 4-132 (150)
20 2ig6_A NIMC/NIMA family protei 99.7 5.8E-16 2E-20 121.2 14.2 128 44-196 18-147 (150)
21 3fkh_A Putative pyridoxamine 5 99.7 1.3E-15 4.3E-20 118.2 13.6 115 46-186 11-125 (138)
22 3dmb_A Putative general stress 99.7 1.7E-15 5.8E-20 118.0 14.0 132 39-193 2-136 (147)
23 2fg9_A 5-nitroimidazole antibi 99.6 3.1E-15 1.1E-19 119.9 13.5 132 46-186 28-166 (178)
24 2aq6_A Pyridoxine 5'-phosphate 99.6 5.2E-15 1.8E-19 113.7 13.8 127 45-189 6-143 (147)
25 2hq9_A MLL6688 protein; struct 99.6 4.4E-15 1.5E-19 115.1 12.6 122 46-186 9-143 (149)
26 2qea_A Putative general stress 99.6 1.2E-14 4.3E-19 114.5 15.3 124 45-192 5-131 (160)
27 3cp3_A Uncharacterized protein 99.6 6.8E-15 2.3E-19 114.3 13.4 118 45-187 16-136 (148)
28 2hti_A BH0577 protein; structu 99.6 1.5E-14 5.2E-19 116.3 14.9 129 46-187 15-161 (185)
29 3u35_A General stress protein; 99.6 1.1E-14 3.7E-19 117.8 12.8 130 41-193 23-155 (182)
30 2htd_A Predicted flavin-nucleo 99.5 2.3E-13 7.8E-18 105.1 15.1 111 46-186 29-139 (140)
31 2fur_A Hypothetical protein; s 99.5 4.1E-14 1.4E-18 116.3 11.3 132 46-187 22-162 (209)
32 2q9k_A Uncharacterized protein 99.5 2E-13 6.7E-18 107.2 12.9 108 47-193 12-121 (151)
33 2vpa_A NIMA-related protein; c 99.5 7E-14 2.4E-18 115.7 9.2 135 44-188 43-194 (216)
34 3ba3_A Protein LP_0091, pyrido 99.4 3.8E-12 1.3E-16 99.4 11.4 130 47-193 5-137 (145)
35 2ol5_A PAI 2 protein; structur 99.4 7.4E-12 2.5E-16 102.6 12.4 130 47-186 13-161 (202)
36 1dnl_A Pyridoxine 5'-phosphate 99.3 2.3E-11 8E-16 99.4 12.2 121 50-191 25-175 (199)
37 1ci0_A Protein (PNP oxidase); 99.2 3.2E-10 1.1E-14 94.6 16.0 123 52-192 51-203 (228)
38 1nrg_A Pyridoxine 5'-phosphate 99.2 5.4E-10 1.8E-14 94.9 14.0 120 53-193 75-224 (261)
39 1ty9_A Phenazine biosynthesis 99.2 5.5E-10 1.9E-14 92.8 13.5 119 50-192 50-199 (222)
40 2ou5_A Pyridoxamine 5'-phospha 99.1 2.5E-10 8.4E-15 91.5 10.6 119 56-193 29-157 (175)
41 2a2j_A Pyridoxamine 5'-phospha 99.1 1.1E-09 3.6E-14 92.4 12.5 121 53-192 77-225 (246)
42 2i51_A Uncharacterized conserv 99.1 7.6E-09 2.6E-13 84.0 17.2 138 39-193 4-173 (195)
43 3in6_A FMN-binding protein; st 98.7 1.8E-07 6.3E-12 72.8 12.1 126 44-188 17-143 (148)
44 3a6r_A FMN-binding protein; el 98.6 5.6E-07 1.9E-11 68.0 10.4 115 47-187 4-120 (122)
45 3r5l_A Deazaflavin-dependent n 98.3 3E-06 1E-10 64.0 9.5 102 55-182 14-122 (122)
46 3r5z_A Putative uncharacterize 97.8 4.1E-05 1.4E-09 59.4 7.2 100 57-182 38-144 (145)
47 3r5y_A Putative uncharacterize 97.8 9E-05 3.1E-09 57.6 8.6 100 57-182 40-146 (147)
48 3h96_A F420-H2 dependent reduc 97.8 0.0001 3.6E-09 56.9 8.6 103 55-182 29-142 (143)
49 2ptf_A Uncharacterized protein 77.5 3.2 0.00011 33.9 5.1 55 58-119 37-92 (233)
50 2iml_A Hypothetical protein; F 62.8 9.1 0.00031 30.4 4.6 55 58-118 16-71 (199)
51 3e4v_A NADH:FMN oxidoreductase 61.9 11 0.00038 29.2 4.9 68 48-119 10-78 (186)
52 2nr4_A Conserved hypothetical 59.8 9.5 0.00033 30.5 4.2 52 59-118 32-83 (213)
53 3b5m_A Uncharacterized protein 44.4 24 0.00082 27.9 4.2 57 59-118 7-66 (205)
54 1eje_A FMN-binding protein; st 42.7 13 0.00044 28.9 2.3 68 49-119 20-87 (192)
55 3bpk_A Nitrilotriacetate monoo 38.1 44 0.0015 26.0 4.9 71 45-119 14-92 (206)
56 3fge_A Putative flavin reducta 31.7 44 0.0015 26.0 3.9 67 48-119 16-91 (203)
57 3rh7_A Hypothetical oxidoreduc 30.7 1.6E+02 0.0055 24.8 7.5 70 47-119 19-90 (321)
58 1yoa_A Putative flavoprotein; 29.9 83 0.0028 23.1 5.1 68 48-119 5-74 (159)
59 3pft_A Flavin reductase; desul 28.7 1.2E+02 0.0041 22.4 5.8 68 48-119 6-75 (157)
60 1rz1_A Phenol 2-hydroxylase co 27.1 76 0.0026 23.5 4.4 68 48-119 5-74 (161)
61 3hmz_A Flavin reductase domain 26.2 17 0.00059 28.4 0.5 66 48-118 21-87 (199)
62 4hx6_A Oxidoreductase; structu 24.9 1.5E+02 0.0052 22.6 5.9 68 48-119 22-90 (185)
63 2d5m_A Flavoredoxin; flavoprot 24.6 37 0.0013 26.0 2.2 56 58-119 16-74 (190)
64 2ecu_A Flavin reductase (HPAC) 21.7 1.9E+02 0.0065 21.0 5.7 69 48-120 4-74 (149)
65 1i0r_A Conserved hypothetical 21.3 1.1E+02 0.0038 22.9 4.3 59 58-120 13-71 (169)
66 1usc_A Putative styrene monoox 20.9 71 0.0024 24.2 3.1 59 57-119 20-78 (178)
67 3bnk_A Flavoredoxin; protein-F 20.5 96 0.0033 23.8 3.9 58 58-119 18-75 (196)
68 2i4r_A V-type ATP synthase sub 20.3 1.2E+02 0.0041 21.2 4.0 42 15-65 20-61 (102)
No 1
>1xhn_A CREG, cellular repressor of E1A-stimulated genes; beta-barrel, unknown function; HET: MSE; 1.95A {Homo sapiens} SCOP: b.45.1.1
Probab=100.00 E-value=3.1e-39 Score=261.96 Aligned_cols=167 Identities=40% Similarity=0.778 Sum_probs=148.6
Q ss_pred CCCCchHHHHHHHHHHhcCCeEEEEeecCCC--CCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEE
Q 047182 38 NKPHPNDAAAYARWLVSQNSWGVLSTISSGL--GGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAI 115 (207)
Q Consensus 38 ~~~~~~~~~~~ar~LL~~~~~~vLAT~s~~~--~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V 115 (207)
.+|+.++.+++||+||+++++|+|||++++. +|+||+|+++|++|++.+.+|.+||++|..++|++||++||||||+|
T Consensus 12 ~~~~~~~~~~~ar~ll~~~~~g~LaTi~~~~~~dG~P~~s~v~~~~~~~~d~~g~~~f~~s~~~~~~~nl~~nprvSl~v 91 (184)
T 1xhn_A 12 SLPPREDAARVARFVTHVSDWGALATISTLEAVRGRPFADVLSLSDGPPGAGSGVPYFYLSPLQLSVSNLQENPYATLTM 91 (184)
T ss_dssp CCCCTTCHHHHHHHHHHHCSEEEEEEECCCGGGTTCEEEEEEECBSCSTTCCCSCCEEEECTTSHHHHHHHHCCEEEEEE
T ss_pred CCCCChHHHHHHHHHHHhCCEEEEEecccCCCCCCcceEEEEEEEeccCcCCCCCEEEEEeCccHhHHHHhhCCCEEEEE
Confidence 3678888999999999999999999998621 49999999999966544678999999999999999999999999999
Q ss_pred eeCCCCCCCC--CCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEEeccCCC
Q 047182 116 SEYPLGTCGK--RDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 116 ~~~~~~~~~~--~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~V~GFG~ 193 (207)
.+++..+|++ .+|.++.++|||++|+++++++ +|++.++++|+++||+++.|.+.+||.||||+|+++++++|||+
T Consensus 92 ~~~~~~~~~~~~~dp~~~~~~rvtl~G~a~~v~d--~e~~~~~~~~~~~hP~~~~~~~~~~~~~~~l~i~~i~~v~gFG~ 169 (184)
T 1xhn_A 92 TLAQTNFCKKHGFDPQSPLCVHIMLSGTVTKVNE--TEMDIAKHSLFIRHPEMKTWPSSHNWFFAKLNITNIWVLDYFGG 169 (184)
T ss_dssp EGGGTTHHHHHTCCTTSTTSCEEEEEEEEEECCG--GGHHHHHHHHHHHCGGGGGSCGGGCCEEEEEEEEEEEEECSSSS
T ss_pred ecCCCccccccCCCCccccCceEEEEEEEEECCh--HHHHHHHHHHHHHCcChhHcccCCCEEEEEEEEeEEEEEccCCc
Confidence 9987544433 4666555899999999999985 36788999999999999999999999999999999999999999
Q ss_pred ceeechhhhcccC
Q 047182 194 PKPLTVDQYLHAK 206 (207)
Q Consensus 194 a~~v~~~~~~~a~ 206 (207)
++||+++||.+|+
T Consensus 170 ~~~v~~~~~~~a~ 182 (184)
T 1xhn_A 170 PKIVTPEEYYNVT 182 (184)
T ss_dssp CEECCHHHHHHCC
T ss_pred eEEeCHHHHhhcc
Confidence 9999999999886
No 2
>3dnh_A Uncharacterized protein ATU2129; APC6114, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2, protein structure initiative; 1.94A {Agrobacterium tumefaciens}
Probab=100.00 E-value=8.8e-36 Score=253.97 Aligned_cols=153 Identities=18% Similarity=0.272 Sum_probs=132.9
Q ss_pred CCCCCchHHHHHHHHHHhcCCeEEEEeec-CCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEE
Q 047182 37 SNKPHPNDAAAYARWLVSQNSWGVLSTIS-SGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAI 115 (207)
Q Consensus 37 ~~~~~~~~~~~~ar~LL~~~~~~vLAT~s-~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V 115 (207)
+.+|+.+++++.+|+||+++++|+|||++ . +|+||+|+++|+ .+.+|.+||++|.++.|++||++||||||+|
T Consensus 20 ~~~p~~~~~~~~ar~lL~~~~~g~LaTv~~~--dG~P~~s~v~y~----~d~~g~~~~~~s~~~~h~~NL~~dprvSl~V 93 (258)
T 3dnh_A 20 PSAGAPFEAVRVARDVLHTSRTAALATLDPV--SGYPYTTATNIG----IEPDGTPFFFAAGLTLHARNMETDARISVTL 93 (258)
T ss_dssp ------CCHHHHHHHHHHHCCEEEEEEECTT--TCCEEEEEEECE----ECTTSCEEEEEETTSHHHHHHHHCCEEEEEE
T ss_pred CCCCCCHHHHHHHHHHHHhCCEEEEEeccCC--CCceEEEEEEEE----ECCCCCEEEEEeCCcHHHHHHhhCCCEEEEE
Confidence 35788999999999999999999999999 5 699999999999 7778999999999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEEeccCCC-c
Q 047182 116 SEYPLGTCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFLINWFGG-P 194 (207)
Q Consensus 116 ~~~~~~~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~V~GFG~-a 194 (207)
.+++. .+|+ .++|||++|++++++++ |++.++++|++|||+++.|.+.+||.||||+|++++||+|||+ +
T Consensus 94 ~~~~~-----~d~~--~~~rvtl~G~a~~v~~~--e~~~l~~~y~~rhP~a~~~~~~~df~l~rl~~~~v~~v~GFG~~a 164 (258)
T 3dnh_A 94 APFGK-----GDAL--TLPRLTLVGRADRIGPD--EVPLAIARYIARYPKAKLYLSLPDTRLYRLRTEGVQINGGPARNA 164 (258)
T ss_dssp CCGGG-----SCGG--GSCEEEEEEEEEECCGG--GHHHHHHHHHHHCTTHHHHTSSTTEEEEEEEEEEEEEEC------
T ss_pred ecCCC-----CChh--hCCeEEEEEEEEEcCch--HHHHHHHHHHHHCcChHHcccCCCeEEEEEEEeEEEEEcccCccc
Confidence 98752 3554 78999999999999864 5789999999999999999999999999999999999999999 9
Q ss_pred eeechhhhcc
Q 047182 195 KPLTVDQYLH 204 (207)
Q Consensus 195 ~~v~~~~~~~ 204 (207)
+||+++||.+
T Consensus 165 ~~v~~~d~~~ 174 (258)
T 3dnh_A 165 SNITPADLRT 174 (258)
T ss_dssp CCCCHHHHSC
T ss_pred ccCCHHHhcc
Confidence 9999999998
No 3
>3gas_A Heme oxygenase; FMN-binding split barrel, oxidoreductase; HET: HEM; 1.80A {Helicobacter pylori}
Probab=100.00 E-value=8.3e-34 Score=241.95 Aligned_cols=149 Identities=9% Similarity=0.114 Sum_probs=135.6
Q ss_pred HHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCC-CeEEEEeeCCCCC
Q 047182 44 DAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDK-RSSLAISEYPLGT 122 (207)
Q Consensus 44 ~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~np-rvSl~V~~~~~~~ 122 (207)
...+++++|++++++++|||+++ +|+|++|+++|+ .+ +|.+||++|.+++|++||++|| ||||+|.+++..
T Consensus 86 ~l~~ei~~ll~~~~~~~LAT~~~--~G~P~~S~v~f~----~~-~g~~~iliS~lA~Ht~NL~~np~rvSllviede~~- 157 (259)
T 3gas_A 86 GVEEEVKAFKEGFDSVCLATLHP--NGHVVCSYAPLM----SD-GKQYYIYVSEVAEHFAGLKNNPHNVEVMFLEDESK- 157 (259)
T ss_dssp HHHHHHHHHHHTCSEEEEEEECT--TSCEEEEEEEEE----EE-TTEEEEEEETTSHHHHHHHHSTTSEEEEEECCTTT-
T ss_pred hHHHHHHHHHHhCCEEEEEeeCc--CCCEEEEEEEEE----EE-CCEEEEEEeCchHHHHHHHhCCCeEEEEEEeCccc-
Confidence 34578999999999999999997 699999999999 55 4789999999999999999999 999999999862
Q ss_pred CCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCC---CCCCCCCCCeEEEEEEEeEEEEeccCCCceeech
Q 047182 123 CGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPE---MKGWPKDHNFQTFKLEIDDIFLINWFGGPKPLTV 199 (207)
Q Consensus 123 ~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~---~~~~~~~~df~~~rl~~~~~~~V~GFG~a~~v~~ 199 (207)
..+|+ +.+|+|+.|++++|+++ ++++.+++.|++|||+ ++.|.+++||.||+|+|++++||+|||+++||++
T Consensus 158 --~~~~~--a~~Rlt~~g~A~~v~~~-~~~~~~~~~~~~r~p~~~~~~~~~~~~DF~l~rl~p~~~r~v~GFG~a~~l~~ 232 (259)
T 3gas_A 158 --AKSAI--LRKRLRYKTNTRFIERG-AEFDKAFDSFIEKTGGAGGIKTIRAMQDFHLIALDFKEGRFVKGFGQAYDILG 232 (259)
T ss_dssp --SSBTT--BCCEEEEEEEEEEECSS-HHHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEETTEEEEEET
T ss_pred --cCChh--hcCeEEEEEEEEECCCc-hHHHHHHHHHHHHcCCchhhHhcccCCCeEEEEEEEeEEEEEccccEEEEeCH
Confidence 34665 89999999999999884 6899999999999998 7888999999999999999999999999999999
Q ss_pred hhhccc
Q 047182 200 DQYLHA 205 (207)
Q Consensus 200 ~~~~~a 205 (207)
++|...
T Consensus 233 ~~l~~~ 238 (259)
T 3gas_A 233 DKIAYV 238 (259)
T ss_dssp TEEEES
T ss_pred HHHHHh
Confidence 998754
No 4
>3swj_A CHUZ, putative uncharacterized protein; heme oxygenase, bacterial iron aquisition, heme bindin; HET: HEM; 2.41A {Campylobacter jejuni}
Probab=100.00 E-value=1.7e-33 Score=239.02 Aligned_cols=153 Identities=11% Similarity=0.082 Sum_probs=138.1
Q ss_pred CchHHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCC-CeEEEEeeCC
Q 047182 41 HPNDAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDK-RSSLAISEYP 119 (207)
Q Consensus 41 ~~~~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~np-rvSl~V~~~~ 119 (207)
+.++..+++++||+++++++|||+++ +|+|++|+++|+ .+ +|.+||++|.+++|++||++|| ||||+|.+++
T Consensus 83 d~~~l~~e~~~ll~~~~~~~LAT~~~--dG~P~~s~v~~~----~~-~g~~~~~~s~~a~h~~NL~~nP~rvSl~v~e~e 155 (251)
T 3swj_A 83 NFSGVEKELNEFMLSFNSVALATLNA--NGEVVCSYAPFV----ST-QWGNYIYISEVSEHFNNIKVNPNNIEIMFLEDE 155 (251)
T ss_dssp CCSHHHHHHHHHHHTCSEEEEEEECT--TSCEEEEEEEEE----EE-TTEEEEEEETTSHHHHHHHHSTTCEEEEEECCT
T ss_pred ChhhHHHHHHHHHhhCCEEEEEEECC--CCCEEEEEEEEE----EE-CCEEEEEEeCchHHHHHHHhCCCeEEEEEEcCc
Confidence 45577889999999999999999998 699999999999 55 7899999999999999999999 9999999887
Q ss_pred CCCCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCC---CCCCCCCCeEEEEEEEeEEEEeccCCCcee
Q 047182 120 LGTCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEM---KGWPKDHNFQTFKLEIDDIFLINWFGGPKP 196 (207)
Q Consensus 120 ~~~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~---~~~~~~~df~~~rl~~~~~~~V~GFG~a~~ 196 (207)
.. ..+++ +.+|+|+.|+++.|+++ ++++.+++.|.+|||++ +.|.+.+||.||||+|++++||+|||+++|
T Consensus 156 ~~---~~~~~--~~~rltl~G~a~~v~~~-~e~~~~~~~~~~k~p~a~~~~~~~~~~Df~l~rl~p~~~r~v~GFG~a~~ 229 (251)
T 3swj_A 156 SK---AASVI--LRKRLRYRVNASFLERG-ERFDQIYDEFEKQTGGEGGIKTIRKMLDFHLVKLEFKKGRFVKGFGQAYD 229 (251)
T ss_dssp TT---SSCTT--CCCEEEEEEEEEECCSS-HHHHHHHHHHHHHHCSTTTHHHHHTCTTEEEEEEEEEEEEEEEETTEEEE
T ss_pred cc---ccCcc--ccceEEEEEEEEEecCh-hHHHHHHHHHHHHCCCchhhhhcCcccCEEEEEEEeeEEEEECCcceeEE
Confidence 52 34554 78999999999999874 68889999999999995 667788999999999999999999999999
Q ss_pred echhhhcccC
Q 047182 197 LTVDQYLHAK 206 (207)
Q Consensus 197 v~~~~~~~a~ 206 (207)
|+++||..+.
T Consensus 230 l~~~~l~~~~ 239 (251)
T 3swj_A 230 IENGNVTHVG 239 (251)
T ss_dssp ESSSCCEESC
T ss_pred eCHHHHHHhh
Confidence 9999998764
No 5
>2arz_A Hypothetical protein PA4388; hypothetical protein,structural genomics,MCSG, PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa} SCOP: b.45.1.1
Probab=99.98 E-value=1.6e-31 Score=225.17 Aligned_cols=154 Identities=24% Similarity=0.322 Sum_probs=137.2
Q ss_pred CCCchHHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeC
Q 047182 39 KPHPNDAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEY 118 (207)
Q Consensus 39 ~~~~~~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~ 118 (207)
+|+..+.++++|+||+++++|+|||++++.+|+|++|+++|+ .+.+|.+||+++..++|++||++||||||+|.+.
T Consensus 2 ~~~~~~~~~~~r~ll~~~~~~~LaT~~~~~dG~P~~s~v~~~----~d~~g~~~f~~s~~s~k~~nl~~nprvsl~v~~~ 77 (247)
T 2arz_A 2 NSMSVEAAKNARELLLKEYRAVLSTHSKKWPGFPFGSVVPYC----LDAEGRPLILISRIAQHTHNLQADPRCSMLVGER 77 (247)
T ss_dssp ---CHHHHHHHHHHHHHCSEEEEEEECSSSTTCEEEEEEECE----ECTTSCEEEEEETTSHHHHHHHHCCEEEEEEECT
T ss_pred CCCChHHHHHHHHHHHhCCEEEEEEcCCCCCCcceEEEEEEE----ECCCCCEEEEEeChhHHHHHHHhCCCeEEEEecC
Confidence 467788999999999999999999998622499999999999 7888999999999999999999999999999765
Q ss_pred CCCCCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEEeccCCCceeec
Q 047182 119 PLGTCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFLINWFGGPKPLT 198 (207)
Q Consensus 119 ~~~~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~V~GFG~a~~v~ 198 (207)
.. .+|+ .+.+|+++|+++.+++ +|.+.+.++|+++||+++.|.+.++|.+|||+|++++|++|||+++||+
T Consensus 78 ~~-----~~~~--~~~~v~l~G~a~~v~d--~e~~~~~~~~~~~~P~~~~~~~~~~~~l~rl~~~~~~~~~gfG~~~~v~ 148 (247)
T 2arz_A 78 GA-----EDIQ--AVGRLTLLAEARQLAE--EEVAAAAERYYRYFPESADYHRVHDFDFWVLQPVQWRFIGGFGAIHWLA 148 (247)
T ss_dssp TC-----SSTT--SSCEEEEEEEEEECCH--HHHHHHHHHHHHHCGGGTTCBTTBBEEEEEEEEEEEEEECTTCCEEEEE
T ss_pred CC-----CChh--hCceEEEEEEEEECCc--HHHHHHHHHHHHHCcChhhcccccCcEEEEEEEEEEEEEcCCCceEEeC
Confidence 42 3554 6889999999999984 4578899999999999988988999999999999999999999999999
Q ss_pred hhhhccc
Q 047182 199 VDQYLHA 205 (207)
Q Consensus 199 ~~~~~~a 205 (207)
++||.+|
T Consensus 149 ~~~~~~a 155 (247)
T 2arz_A 149 AERVPLA 155 (247)
T ss_dssp TTTSCCC
T ss_pred hhhhccc
Confidence 9999876
No 6
>3tgv_A Heme-binding protein HUTZ; 2.00A {Vibrio cholerae}
Probab=99.97 E-value=6.2e-32 Score=212.24 Aligned_cols=136 Identities=14% Similarity=0.164 Sum_probs=122.3
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGK 125 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~ 125 (207)
..++++||+++++++|||+++ +|+|++|+|+|+ .+ +|.+||++|..++|++||++||||||+|.+++.+ .
T Consensus 4 ~~ei~~fl~~~~~~~LaT~~~--~G~P~~s~v~~~----~~-~~~~~~~~s~~~~~~~nl~~~prvsl~v~~~~~~---~ 73 (148)
T 3tgv_A 4 EPEIKEFRQERKTLQLATVDA--QGRPNVSYAPFV----QN-QEGYFVLISHIARHARNLEVNPQVSIMMIEDETE---A 73 (148)
T ss_dssp HHHHHHHHHHCCEEEEEEECT--TCCEEEEEEEEE----EE-TTEEEEEEETTSHHHHHHHHSCEEEEEEECCGGG---C
T ss_pred hHHHHHHHhhCCEEEEEEECC--CCCEEEEEEEEE----EE-CCEEEEEECCccHHHHHHHhCCCeEEEEecCccc---c
Confidence 457899999999999999998 599999999999 55 5789999999999999999999999999998752 2
Q ss_pred CCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCC-CCCCCCCCCeEEEEEEEeEEEEeccCCC
Q 047182 126 RDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPE-MKGWPKDHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 126 ~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~-~~~~~~~~df~~~rl~~~~~~~V~GFG~ 193 (207)
.+++ +..|+|+.|+++.+++++++++.+.++|..+||. ++.|...+||.||||+|++++||+|||-
T Consensus 74 ~~~~--~~~rltl~G~a~~v~~~~~~~~~~~~~~~~~~~~~a~~~~~~~DF~~~rl~p~~~r~V~GFG~ 140 (148)
T 3tgv_A 74 KQLF--ARKRLTFDAVASMVERDSELWCQVIAQMGERFGEIIDGLSQLQDFMLFRLQPEQGLFVKGFGL 140 (148)
T ss_dssp SCGG--GCCEEEEEEEEEEECTTSHHHHHHHHHHHHHHCTHHHHHTTCTTEEEEEEEECSCCEEESCGG
T ss_pred cCcc--cceEEEEeeeEEEcCCCcHHHHHHHHHHHhhcchhhhHhhccCCEEEEEEEeEEEEEECcccc
Confidence 3444 7899999999999998888889999999999855 6788899999999999999999999995
No 7
>1vl7_A Hypothetical protein ALR5027; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, oxidoreductase; 1.50A {Nostoc SP} SCOP: b.45.1.1
Probab=99.96 E-value=6.9e-29 Score=195.74 Aligned_cols=144 Identities=15% Similarity=0.177 Sum_probs=119.4
Q ss_pred CCCchHHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeC
Q 047182 39 KPHPNDAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEY 118 (207)
Q Consensus 39 ~~~~~~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~ 118 (207)
........+++++||+++++++|||+++ +|.|+++++.|+ .+.+|.+||+++..++|++||++||+|||++.++
T Consensus 13 ~~~~~~~~~~~~~ll~~~~~~~LaTv~~--dG~P~~~~v~~~----~~~~g~~~f~t~~~s~k~~nl~~np~vsl~v~~~ 86 (157)
T 1vl7_A 13 MSQLEKAQAEYAGFIQEFQSAIISTISE--QGIPNGSYAPFV----IDDAKNIYIYVSGLAVHTKNIEANPLVNVLFVDD 86 (157)
T ss_dssp ----------CHHHHTTCSEEEEEEECT--TSCEEEEEEEEE----ECTTCCEEEEECTTSHHHHHHHHCCEEEEEEECC
T ss_pred HHhHHhHHHHHHHHHHhCCEEEEEEECC--CCCEEEEEEEEE----EcCCCCEEEEEeCccHHHHHHHhCCcEEEEEEcC
Confidence 3445566778999999999999999998 599999999999 6666899999999999999999999999999987
Q ss_pred CCCCCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCC-CCCCCCCCeEEEEEEEeEEEEeccCCC
Q 047182 119 PLGTCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEM-KGWPKDHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 119 ~~~~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~-~~~~~~~df~~~rl~~~~~~~V~GFG~ 193 (207)
+.. ..+++ +..+|++.|+++.+++++++++.++++|.++||+. +.|.+.++|.+|+|+|++++|++|||+
T Consensus 87 ~~~---~~~~~--~~~~v~i~G~a~~v~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~l~~~~~~~~~GFG~ 157 (157)
T 1vl7_A 87 EAK---TNQIF--ARRRLSFDCTATLIERESQKWNQVVDQFQERFGQIIEVLRGLADFRIFQLTPKEGRFVIGFGA 157 (157)
T ss_dssp GGG---CSSGG--GCCEEEEEEEEEEECTTSHHHHHHHHHHHHHHTHHHHHHHHHSCCEEEEEEEEEEEEECSSCC
T ss_pred ccc---cCCcc--cCceEEEEEEEEEcCCCcHHHHHHHHHHHHHCchHHHHhhccCCEEEEEEEEeEEEEEcCcCC
Confidence 631 12333 57899999999999887677889999999999984 667677899999999999999999995
No 8
>2hq7_A Protein, related to general stress protein 26(GS2 B.subtilis; NP_350077.1, structural genomics, joint center for structural genomics; 2.00A {Clostridium acetobutylicum} SCOP: b.45.1.1
Probab=99.82 E-value=6.8e-20 Score=141.11 Aligned_cols=139 Identities=12% Similarity=0.063 Sum_probs=111.0
Q ss_pred hHHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCC-CCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCC
Q 047182 43 NDAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNE-GSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLG 121 (207)
Q Consensus 43 ~~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~-~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~ 121 (207)
++..++++++|+++++++|||++. +|.|++++|.|. .+ ++|.+||+++..++|++||++||+|||++..+.
T Consensus 5 ~~~~~~~~~~l~~~~~~~LaT~~~--~G~P~~~pv~~~----~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~-- 76 (146)
T 2hq7_A 5 EKFLIESNELVESSKIVMVGTNGE--NGYPNIKAMMRL----KHDGLKKFWLSTNTSTRMVERLKKNNKICLYFVDDN-- 76 (146)
T ss_dssp SHHHHHHHHHHHHCSEEEEEEECG--GGCEEEEEEEEE----EEETTTEEEEEEECCHHHHHHHHHCCEEEEEEECSS--
T ss_pred HHHHHHHHHHHhcCCEEEEEEECC--CCCEEEEEEEEE----EEcCCCEEEEEecCCCHHHHHHhhCCeEEEEEECCC--
Confidence 346788999999999999999986 599999999998 33 358999999999999999999999999998763
Q ss_pred CCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhC-CCCCCCCCCCCeEEEEEEEeEEEEeccCCCceeechh
Q 047182 122 TCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKH-PEMKGWPKDHNFQTFKLEIDDIFLINWFGGPKPLTVD 200 (207)
Q Consensus 122 ~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rh-P~~~~~~~~~df~~~rl~~~~~~~V~GFG~a~~v~~~ 200 (207)
....+++.|+++.+++ .++..++.+.+.+++ |+. ...+++.+++|+|+++.+.+|||+++ ...+
T Consensus 77 ----------~~~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~p~~~~~w~~~~~~~-f~~~ 141 (146)
T 2hq7_A 77 ----------KFAGLMLVGTIEILHD-RASKEMLWTDGCEIYYPLG---IDDPDYTALCFTAEWGNYYRHLKNIT-FKID 141 (146)
T ss_dssp ----------SSEEEEEEEEEEEECC-HHHHHHHCCTTHHHHCTTG---GGCTTEEEEEEEEEEEEEEETTEEEE-EEGG
T ss_pred ----------CceEEEEEEEEEEEcC-HHHHHHHHHHHHHHHCCCC---CCCCCEEEEEEEccEEEEEeCCCCeE-EEcc
Confidence 3378999999999976 345555555555554 543 23478999999999999999999874 2444
Q ss_pred hhcc
Q 047182 201 QYLH 204 (207)
Q Consensus 201 ~~~~ 204 (207)
++.+
T Consensus 142 ~~~~ 145 (146)
T 2hq7_A 142 EIYN 145 (146)
T ss_dssp GC--
T ss_pred cccC
Confidence 5554
No 9
>2iab_A Hypothetical protein; NP_828636.1, structural genomics, JOIN for structural genomics, JCSG; 2.00A {Streptomyces avermitilis}
Probab=99.79 E-value=6.1e-19 Score=138.67 Aligned_cols=136 Identities=12% Similarity=0.077 Sum_probs=108.5
Q ss_pred CCCchHHHHHHHHHHhcCCeEEEEeecCCCC-CCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEee
Q 047182 39 KPHPNDAAAYARWLVSQNSWGVLSTISSGLG-GAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISE 117 (207)
Q Consensus 39 ~~~~~~~~~~ar~LL~~~~~~vLAT~s~~~~-G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~ 117 (207)
+-+..+..++++++|.++++|+|||++. + |.|++++|.|+ .+ +|.+||+++..++|++||++||+|||++.+
T Consensus 7 ~~~~~~~~~~~~~~L~~~~~~~LaT~~~--d~G~P~~~pv~~~----~d-~~~l~f~t~~~s~K~~~l~~np~Vsl~v~~ 79 (155)
T 2iab_A 7 ARTAKQRIQDTLNRLELDVDAWVSTAGA--DGGAPYLVPLSYL----WD-GETFLVATPAASPTGRNLSETGRVRLGIGP 79 (155)
T ss_dssp CCCHHHHHHHHHHHHHHCCEEEEEEECT--TSSCEEEEEEECE----EC-SSCEEEEEETTSHHHHHHHHHCEEEEEESS
T ss_pred CCChHHhHHHHHHHHhCCCeEEEEEecC--CCCCceEEEEEEE----EE-CCEEEEEECCCCHHHHHHhhCCcEEEEEEc
Confidence 3456777789999999999999999987 6 99999999998 44 688999999999999999999999999975
Q ss_pred CCCCCCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEEeccCCCceee
Q 047182 118 YPLGTCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFLINWFGGPKPL 197 (207)
Q Consensus 118 ~~~~~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~V~GFG~a~~v 197 (207)
.. ..+++.|+++.++++ ++.+++.+.|.++|+. ......+++.+|+|+|+++..-+ +..++
T Consensus 80 ~~--------------~~v~v~G~a~~v~d~-~~~~~~~~~~~~k~~~-~~~~~~~~~~~~ri~p~~v~~w~---~~~~l 140 (155)
T 2iab_A 80 TR--------------DLVLVEGTALPLEPA-GLPDGVGDTFAEKTGF-DPRRLTTSYLYFRISPRRVQAWR---EANEL 140 (155)
T ss_dssp TT--------------CEEEEEEEEEEECGG-GCCTTHHHHHHHHHSC-CGGGCSSCEEEEEEEEEEEEEES---SGGGS
T ss_pred CC--------------CEEEEEEEEEEecCc-hhHHHHHHHHHHHhCC-CccccCCCEEEEEEEEEEEEEec---CCCCc
Confidence 52 468899999999753 4455677888888862 11111368999999999988544 44455
Q ss_pred chh
Q 047182 198 TVD 200 (207)
Q Consensus 198 ~~~ 200 (207)
...
T Consensus 141 ~~r 143 (155)
T 2iab_A 141 SGR 143 (155)
T ss_dssp TTC
T ss_pred Ccc
Confidence 443
No 10
>2asf_A Hypothetical protein RV2074; H37RV, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: CIT; 1.60A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.79 E-value=7.2e-18 Score=129.25 Aligned_cols=121 Identities=14% Similarity=0.092 Sum_probs=104.1
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCC-CCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEG-SGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCG 124 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~-~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~ 124 (207)
.++++++|+++++++|||++. +|.|++++|.|+ .+. +|.+||+++..++|++||.+||+|||++.+..
T Consensus 11 ~~~~~~~L~~~~~~~LaT~~~--dG~P~~~pv~~~----~~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~----- 79 (137)
T 2asf_A 11 SDDALAFLSERHLAMLTTLRA--DNSPHVVAVGFT----FDPKTHIARVITTGGSQKAVNADRSGLAVLSQVDGA----- 79 (137)
T ss_dssp CHHHHHHTTSSCCEEEEEECT--TSCEEEEEECCE----EETTTTEEEEEEETTCHHHHHHHHHCEEEEEEEETT-----
T ss_pred cHHHHHHHhCCCeEEEEEECC--CCCEEEEEEEEE----EECCCCEEEEEeCCCCHHHHHHhhCCeEEEEEECCC-----
Confidence 467899999999999999987 599999999999 555 48999999999999999999999999987531
Q ss_pred CCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEEecc
Q 047182 125 KRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFLINW 190 (207)
Q Consensus 125 ~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~V~G 190 (207)
..+++.|+++.+++ .++.+++.+.|.++||.. ...+++.+++|+|++++--.+
T Consensus 80 ---------~~v~v~G~a~~~~d-~~~~~~~~~~~~~~~~~~---~~~~~~~viri~~~~v~g~~~ 132 (137)
T 2asf_A 80 ---------RWLSLEGRAAVNSD-IDAVRDAELRYAQRYRTP---RPNPRRVVIEVQIERVLGSAD 132 (137)
T ss_dssp ---------EEEEEEEEEEEECC-HHHHHHHHHHHHHHSCCC---CCCTTEEEEEEEEEEEEECTT
T ss_pred ---------CEEEEEEEEEEecC-HHHHHHHHHHHHHhcCcc---cCCCCEEEEEEEEEEEEEecc
Confidence 57899999999975 567788899999999853 246789999999999986544
No 11
>2i02_A General stress protein of COG3871; pyridoxamine 5'-phosphate like family protein, structural genomics, joint center for structural genomics; HET: MSE FMN P33; 1.80A {Nostoc punctiforme} SCOP: b.45.1.1
Probab=99.78 E-value=4.3e-18 Score=131.72 Aligned_cols=130 Identities=10% Similarity=0.141 Sum_probs=103.2
Q ss_pred chHHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEecc-ccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCC
Q 047182 42 PNDAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSF-SDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPL 120 (207)
Q Consensus 42 ~~~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y-~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~ 120 (207)
+++..++++++|.++++++|||+++ +|.|++++|.| . ..+.+|.+||+++..++|++||++||+|||++.....
T Consensus 8 ~~~~~~~~~~~l~~~~~~~LaT~~~--dG~P~~~pv~~~~---~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~~ 82 (148)
T 2i02_A 8 RTQEIQKLHELIKNIDYGMFTTVDD--DGSLHSYPMSKSG---DINSEATLWFFTYAGSHKVTEIEHHEQVNVSFSSPEQ 82 (148)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEECT--TSCEEEEEEECBC---C---CCEEEEEEETTSHHHHHHHHCCEEEEEEEETTT
T ss_pred hHHHHHHHHHHHhcCCEEEEEEEcC--CCCEEEEEeEeeE---EEcCCCeEEEEEcCCCHHHHHHHhCCcEEEEEEcCCC
Confidence 4466788999999999999999997 59999999999 4 0244789999999999999999999999999987752
Q ss_pred CCCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhC-CCCCCCCCCCCeEEEEEEEeEEEEeccCC
Q 047182 121 GTCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKH-PEMKGWPKDHNFQTFKLEIDDIFLINWFG 192 (207)
Q Consensus 121 ~~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rh-P~~~~~~~~~df~~~rl~~~~~~~V~GFG 192 (207)
...+++.|+++.+++ .++.+++.+.+.+++ |.. .+.+++.+++|+|+++.+.++-+
T Consensus 83 ------------~~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~~~~---~~~~~~~v~~i~~~~~~~~~~~~ 139 (148)
T 2i02_A 83 ------------QRYVSISGTSQLVKD-RNKMRELWKPELQTWFPKG---LDEPDIALLKVNINQVNYWDSTS 139 (148)
T ss_dssp ------------TEEEEEEEEEEEECC-HHHHHHHCCGGGGGTCTTG---GGCTTEEEEEEEEEEEEEEEGGG
T ss_pred ------------CeEEEEEEEEEEEcC-HHHHHHHHhHHHHHHccCC---CCCCCEEEEEEEeCEEEEEcCCC
Confidence 267999999999975 445445544444443 432 23478999999999999998743
No 12
>3ec6_A General stress protein 26; alpha-beta structure, structural genomics of niaid; HET: FAD; 1.60A {Bacillus anthracis} SCOP: b.45.1.0
Probab=99.77 E-value=1.1e-17 Score=128.61 Aligned_cols=130 Identities=18% Similarity=0.204 Sum_probs=99.9
Q ss_pred HHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCC
Q 047182 44 DAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTC 123 (207)
Q Consensus 44 ~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~ 123 (207)
+..++++++|+++++++|||++ +|.|++++|.|+ . .+|.+||+++..++|++||++||+|||++.....
T Consensus 3 ~l~~~~~~~L~~~~~~~LaT~~---dg~P~~~pv~~~----~-~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~d--- 71 (139)
T 3ec6_A 3 HLKEKITTIIQGQRTGVLSTVR---NDKPHSAFMMFF----H-EDFVLYVATDRQSKKITDIENNPNVHVLLGREGK--- 71 (139)
T ss_dssp CHHHHHHHHHHSCCEEEEEEEE---TTEEEEEEEECE----E-ETTEEEEEEETTCHHHHHHHHCCEEEEEECC------
T ss_pred hHHHHHHHHHhcCCEEEEEEec---CCCEEEEEEEEE----E-eCCEEEEEECCCCHHHHHHHhCCcEEEEEEecCC---
Confidence 4567899999999999999998 399999999999 4 6789999999999999999999999999964311
Q ss_pred CCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCC---CCCeEEEEEEEeEEEEeccCC--Cceee
Q 047182 124 GKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPK---DHNFQTFKLEIDDIFLINWFG--GPKPL 197 (207)
Q Consensus 124 ~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~---~~df~~~rl~~~~~~~V~GFG--~a~~v 197 (207)
+. ....+++.|+++.+++ .++.+++.+ |.++.|.+ .+++.++||+|+++.+.++.| ....+
T Consensus 72 ----~~--~~~~v~v~G~a~~~~d-~~~~~~~~~------~~~~~~~~~~~~~~~~~i~i~p~~~~~~d~~g~~~~~~~ 137 (139)
T 3ec6_A 72 ----KL--DEDYIEVEGLASIEED-STLKNKFWN------NSLKRWLLRPEDPNYVLIKINPDTIYYIDGAGTTEPEFL 137 (139)
T ss_dssp ----CT--TCCEEEEEEEEEEECC-HHHHHHHCC------GGGGGTCSSTTCTTEEEEEEEEEEEEEEC------CEEE
T ss_pred ----CC--CccEEEEEEEEEEEcC-HHHHHHHHH------HHHHHHhCCCCCCCEEEEEEEeeEEEEEcCCCCCCceee
Confidence 11 2367999999999975 344333322 44555554 578999999999999999988 34444
No 13
>3db0_A LIN2891 protein; putative pyridoxamine 5'-phosphate oxidase, STR genomics, joint center for structural genomics, JCSG; 2.00A {Listeria innocua}
Probab=99.77 E-value=4.9e-18 Score=128.37 Aligned_cols=122 Identities=15% Similarity=0.144 Sum_probs=93.0
Q ss_pred HHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCC
Q 047182 45 AAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCG 124 (207)
Q Consensus 45 ~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~ 124 (207)
..++++++|+++++++|||++ +|.|++++|.|+ . .+|.+||+++..++|++||++||+|||+|..+..
T Consensus 6 ~~~~~~~~l~~~~~~~LaT~~---~g~P~~~pv~~~----~-~~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~---- 73 (128)
T 3db0_A 6 LEDKILAILEQHQVGVLTSVQ---GDFPHARYMTFL----H-DGLTLYTPSGKELPKTEEVRRNPHVCVLIGYDSP---- 73 (128)
T ss_dssp HHHHHHHHHHTCCEEEEEEEE---TTEEEEEEEECE----E-ETTEEEEEC----CTTCCCCCCCEEEEEECCCST----
T ss_pred HHHHHHHHHhhCCEEEEEEec---CCCEEEEEEEEE----e-cCCEEEEEECCCCHHHHHHHhCCceEEEEEEcCC----
Confidence 678899999999999999996 499999999999 4 6789999999999999999999999999965421
Q ss_pred CCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEEec
Q 047182 125 KRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFLIN 189 (207)
Q Consensus 125 ~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~V~ 189 (207)
....+++.|+++.+++ .++.+++.+.+.+++... .+.+++.++||+|+++.|+.
T Consensus 74 -------~~~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~~~---~~~~~~~~~ri~p~~~~~~~ 127 (128)
T 3db0_A 74 -------GSAFLEINGLASLEED-ESIKERIWENISKDWFQG---EDSPSFVVIKIVPEQIRILN 127 (128)
T ss_dssp -------TCCEEEEEEEEEECCC-HHHHHHHHHHHCSSCCC---------CCEEEEEEEEEEEEC
T ss_pred -------CCcEEEEEEEEEEEcC-HHHHHHHHHHHHHHhCCC---CCCCCEEEEEEEeEEEEEec
Confidence 3368999999999975 456666655555444221 12378999999999999975
No 14
>2re7_A Uncharacterized protein; general stress protein COG3871, structural genomics, joint C structural genomics, JCSG; 2.50A {Psychrobacter arcticus}
Probab=99.75 E-value=1.2e-17 Score=126.93 Aligned_cols=125 Identities=11% Similarity=0.075 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCC--CCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCC
Q 047182 44 DAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEG--SGVPYFYLTTLDPTASNALKDKRSSLAISEYPLG 121 (207)
Q Consensus 44 ~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~--~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~ 121 (207)
+..++++++|.++++++|||+++ +|.|++++|.|. ... +|.+||+++..++|++||++||+|||++.....
T Consensus 6 ~~~~~~~~~l~~~~~~~LaT~~~--dG~P~~~pv~~~----~~~~~~~~l~f~t~~~s~K~~~l~~np~v~l~~~~~~~- 78 (134)
T 2re7_A 6 KHIDKIQAVIKDVKFAMISTSNK--KGDIHAWPMTTS----EVNLDNKEIWFIGDKTSDVVKDIQDDARIGLTYATQDE- 78 (134)
T ss_dssp CCHHHHHHHHHHCSCEEEEEECT--TSCEEEEEECCS----EEETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTS-
T ss_pred HHHHHHHHHHhcCCEEEEEEEcC--CCCEEEEecEee----eecCCCceEEEEECCCCHHHHHHhhCCcEEEEEEcCCC-
Confidence 34678999999999999999997 599999999997 332 789999999999999999999999999987642
Q ss_pred CCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHh-CCCCCCCCCCCCeEEEEEEEeEEEEecc
Q 047182 122 TCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAK-HPEMKGWPKDHNFQTFKLEIDDIFLINW 190 (207)
Q Consensus 122 ~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~r-hP~~~~~~~~~df~~~rl~~~~~~~V~G 190 (207)
...+++.|+++.+++ .++.+++.+.+.++ +|.. ...+++.+++|+|+++.+.+|
T Consensus 79 -----------~~~v~v~G~a~~~~d-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~w~~ 133 (134)
T 2re7_A 79 -----------KNYVSISGDAELPTD-KAKLDELWSPVYSAFFANG---KEDANIQLIKVVPHGVECWLS 133 (134)
T ss_dssp -----------SCEEEEEEEEECCCC-HHHHHHHCCHHHHHTSTTG---GGCTTEEEEEEEEEEEEEECC
T ss_pred -----------CeEEEEEEEEEEECC-HHHHHHHhhHHHHHHccCC---CCCCCEEEEEEEeCEEEEecC
Confidence 246899999999976 44555554555555 4643 234789999999999998875
No 15
>2fhq_A Putative general stress protein; alpha-beta structure, structural genomics, PSI, protein STRU initiative; HET: MSE; 1.87A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.75 E-value=2e-17 Score=126.50 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=101.8
Q ss_pred HHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCC-CCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCC
Q 047182 44 DAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNE-GSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGT 122 (207)
Q Consensus 44 ~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~-~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~ 122 (207)
...++++++|+++.+++|||+++ +|.|+++++.|+ .. +++.+||+++..++|++||.+||+|+|++....
T Consensus 8 ~~~~~~~~~l~~~~~~~LaT~~~--~G~P~~~pv~~~----~~~~~~~l~f~t~~~s~k~~~l~~np~v~l~~~~~~--- 78 (141)
T 2fhq_A 8 TMKEKAVELLQKCEVVTLASVNK--EGYPRPVPMSKI----AAEGISTIWMSTGADSLKTIDFLSNPKAGLCFQEKG--- 78 (141)
T ss_dssp CHHHHHHHHHHTCSEEEEEEECT--TSCEEEEEEECC----EEETTTEEEEEEETTSHHHHHHHHCCEEEEEEEETT---
T ss_pred HHHHHHHHHHhcCCEEEEEEECC--CCCEEEEeeEEE----EeCCCCeEEEEeCCCCHHHHHHHhCCcEEEEEEeCC---
Confidence 34678999999999999999997 599999999998 43 348999999999999999999999999998863
Q ss_pred CCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHh-CCCCCCCCCCCCeEEEEEEEeEEEEecc
Q 047182 123 CGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAK-HPEMKGWPKDHNFQTFKLEIDDIFLINW 190 (207)
Q Consensus 123 ~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~r-hP~~~~~~~~~df~~~rl~~~~~~~V~G 190 (207)
..+++.|+++.+++ .++.+++.+.+..+ +|.. ...+++.+++|+|+++.+.+|
T Consensus 79 -----------~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~p~~---~~~~~~~~~~i~p~~~~~~~~ 132 (141)
T 2fhq_A 79 -----------DSVALMGEVEVVTD-EKLKQELWQDWFIEHFPGG---PTDPGYVLLKFTANHATYWIE 132 (141)
T ss_dssp -----------EEEEEEEEEEEECC-HHHHHHSCCGGGGGTCTTC---TTCTTEEEEEEEEEEEEEEET
T ss_pred -----------CEEEEEEEEEEECC-HHHHHHHHHHHHHHHcCCC---CCCCCEEEEEEEcCEEEEeeC
Confidence 38999999999975 34555554555544 4543 235789999999999999998
No 16
>3f7e_A Pyridoxamine 5'-phosphate oxidase-related, FMN- binding; F420 dependent reductase, unknown function; HET: MSE; 1.23A {Mycobacterium smegmatis}
Probab=99.73 E-value=3.7e-17 Score=124.25 Aligned_cols=120 Identities=13% Similarity=0.078 Sum_probs=99.1
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCCC
Q 047182 47 AYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGKR 126 (207)
Q Consensus 47 ~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~~ 126 (207)
++++++|+++++++|||+++ +|.|+++++.|+ .+ +|.+||+.+..++|++||++||+|||++.+.+.
T Consensus 6 ~~~~~~l~~~~~~~LaT~~~--dG~P~~~pv~~~----~d-~~~l~f~t~~~s~k~~~l~~np~v~l~v~~~~~------ 72 (131)
T 3f7e_A 6 EGYESLLERPLYGHLATVRP--DGTPQVNAMWFA----WD-GEVLRFTHTTKRQKYRNIKANPAVAMSVIDPDN------ 72 (131)
T ss_dssp TTCHHHHHSCCCEEEEEECT--TSCEEEEEECCE----EC-SSCEEEEEETTSHHHHHHHHCCEEEEEEECSSC------
T ss_pred HHHHHHHhCCCcEEEEEECC--CCCEEEEEEEEE----EE-CCEEEEEECCCCHHHHHHhhCCcEEEEEEcCCC------
Confidence 35788999999999999987 599999999998 44 578999999999999999999999999998753
Q ss_pred CCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCC-CCCCC-CCCCeEEEEEEEeEEE
Q 047182 127 DPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPE-MKGWP-KDHNFQTFKLEIDDIF 186 (207)
Q Consensus 127 dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~-~~~~~-~~~df~~~rl~~~~~~ 186 (207)
....+++.|+++.|++++ + .++.+.+.+||+. ...+. ..++..++||+|+++.
T Consensus 73 -----~~~~v~v~G~a~~v~~~~-~-~~~~~~l~~ky~~~~~~~~~~~~~~~v~ri~~~~~~ 127 (131)
T 3f7e_A 73 -----PYRYLEVRGLVEDIVPDP-T-GAFYLKLNDRYDGPLTEPPADKADRVIIVVRPTAFS 127 (131)
T ss_dssp -----TTCEEEEEEEEEEEEECT-T-CHHHHHHHHHTTCSCCSCCTTGGGEEEEEEEEEEEE
T ss_pred -----CeeEEEEEEEEEEeccCc-c-HHHHHHHHHHhCCcccCCCCCCCCEEEEEEEeEEEE
Confidence 126999999999998642 2 4678888898854 22322 3468899999999875
No 17
>1rfe_A Hypothetical protein RV2991; structural genomics, TB, FMN BIN PSI, protein structure initiative, TB structural genomics consortium; 2.00A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.72 E-value=5.9e-17 Score=126.76 Aligned_cols=128 Identities=13% Similarity=0.101 Sum_probs=105.2
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGK 125 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~ 125 (207)
.++++++|+++.+++|+|++. +|.|++++++|+ .+ +|.+||+++..+.|++||.+||+|+|++.+.+.
T Consensus 12 ~~~~~~~l~~~~~~~LaT~~~--~G~P~~~pv~~~----~~-~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~----- 79 (162)
T 1rfe_A 12 EAEIADFVNSSRTGTLATIGP--DGQPHLTAMWYA----VI-DGEIWLETKAKSQKAVNLRRDPRVSFLLEDGDT----- 79 (162)
T ss_dssp HHHHHHHHHHCCCEEEEEECT--TSCEEEEEECCE----EE-TTEEEEEEETTSHHHHHHHHCCEEEEEEEECSS-----
T ss_pred HHHHHHHHhcCcEEEEEEECC--CCCEEEEEEEEE----EE-CCEEEEEecCccHHHHHHhhCCeEEEEEEcCCC-----
Confidence 468999999999999999986 599999999999 44 689999999999999999999999999986542
Q ss_pred CCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCC--CCC---C--CCCCeEEEEEEEeEEEEecc
Q 047182 126 RDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEM--KGW---P--KDHNFQTFKLEIDDIFLINW 190 (207)
Q Consensus 126 ~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~--~~~---~--~~~df~~~rl~~~~~~~V~G 190 (207)
. ....++++.|+++.+++ .++..++.+.+.++|+.. ..| . ..+++.+++|+|+++...+.
T Consensus 80 --~--~~~~~v~~~G~a~~v~d-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~ 146 (162)
T 1rfe_A 80 --Y--DTLRGVSFEGVAEIVEE-PEALHRVGVSVWERYTGPYTDECKPMVDQMMNKRVGVRIVARRTRSWDH 146 (162)
T ss_dssp --G--GGCEEEEEEEEEEEECC-HHHHHHHHHHHHHHHTCCCCGGGHHHHHHHTTTEEEEEEEEEEEEEEEG
T ss_pred --c--ccccEEEEEEEEEEeCC-hHHHHHHHHHHHHHhcCcccchhHHHHHhccCceEEEEEEEEEEEEecc
Confidence 0 14478999999999976 456677888888888541 111 1 14689999999999998764
No 18
>3u5w_A Putative uncharacterized protein; ssgcid, seattle structural genomics center for infectious DI FMN-binding protein; 2.05A {Brucella melitensis biovar abortus} SCOP: b.45.1.0 PDB: 3u0i_A
Probab=99.72 E-value=6.7e-17 Score=126.27 Aligned_cols=120 Identities=14% Similarity=0.188 Sum_probs=95.8
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGK 125 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~ 125 (207)
.+++++||+++.+|+|||+. +|.||++++.|+ .+ +|.+||+++ .++|.+||++||+|||+|+.....
T Consensus 12 ~~e~~~lL~~~~~~~Lat~~---dg~P~~~Pv~~~----~~-~~~ly~~~~-~g~K~~~l~~np~V~~~v~~~~~~---- 78 (148)
T 3u5w_A 12 DYDIREMIQHKHVGRLGYVV---DDRPIIVPMTFR----FS-GGSFYSFTT-DGQKTNAMRKNDAICILFDQIESQ---- 78 (148)
T ss_dssp HHHHHHHHHHCCEEEEEEEE---TTEEEEEEEECE----EE-TTEEEEEEC-CHHHHHHHHHCCEEEEEEEEESSS----
T ss_pred HHHHHHHHhcCCEEEEEEcc---CCcEEEEEEEEE----EE-CCEEEEEEC-CchhHHHHhcCCcEEEEEEecCCC----
Confidence 46799999999999999995 599999999999 44 578999996 489999999999999999987531
Q ss_pred CCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCC------CCCCCC------CCCeEEEEEEEeEEE
Q 047182 126 RDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPE------MKGWPK------DHNFQTFKLEIDDIF 186 (207)
Q Consensus 126 ~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~------~~~~~~------~~df~~~rl~~~~~~ 186 (207)
....+|+++|+++.++++ +|...+.+ +..|||. .+.|.. ...+ ++||+|+++.
T Consensus 79 -----~~y~sV~v~G~a~~v~d~-~e~~~al~-l~~ky~~~~~~~~~~p~~~~~~~~~~~~~-v~rI~i~~~s 143 (148)
T 3u5w_A 79 -----TKWRTVLVQGRYREIARE-DEEEAIVR-IMANEPTWWEPAYTKTITKEGTARALKPV-FFRVDIEKLS 143 (148)
T ss_dssp -----SSEEEEEEEEEEEECCGG-GHHHHHHH-HHTTCSSCC-----------------CCE-EEEEEEEEEE
T ss_pred -----CcEEEEEEEEEEEEeCCH-HHHHHHHH-HHHHCCCCccccCCCcccccchhhccCcE-EEEEEeeEEE
Confidence 145799999999999763 57777888 8888985 334433 3566 9999999875
No 19
>2hhz_A Pyridoxamine 5'-phosphate oxidase-related; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.00A {Streptococcus suis}
Probab=99.70 E-value=3.9e-16 Score=121.27 Aligned_cols=126 Identities=14% Similarity=0.171 Sum_probs=102.5
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGK 125 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~ 125 (207)
.++++++|+++++++|||++. +|.|++++|.|. ...++.+||+++..++|++||++||+|+|++...+..
T Consensus 4 ~~~~~~~l~~~~~~~LaTv~~--dG~P~~~p~~~~----~~~~~~l~f~t~~~s~k~~~l~~np~V~l~~~~~~~~---- 73 (150)
T 2hhz_A 4 LKDIMHILEDMKVGVFATLDE--YGNPHARHAHIT----AANEEGIFFMTSPETHFYDQLMGDQRVAMTAISEEGY---- 73 (150)
T ss_dssp HHHHHHHHHHTCEEEEEEECT--TCCEEEEEEEEE----EEETTEEEEEECTTSHHHHHHHHCCEEEEEEEECSTT----
T ss_pred HHHHHHHHhcCCeEEEEEECC--CCCEEEEEEEEE----EEcCCEEEEEecCCCHHHHHHhhCCeEEEEEEcCCcc----
Confidence 457889999999999999987 599999999997 4446789999999999999999999999999876531
Q ss_pred CCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCC---CCCeEEEEEEEeEEEEeccCCC
Q 047182 126 RDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPK---DHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 126 ~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~---~~df~~~rl~~~~~~~V~GFG~ 193 (207)
....+++.|+++.+++ ++ . +.+++++|.++.|.+ .+++.+++|+|+++.+.+.-++
T Consensus 74 ------~~~~v~i~G~a~~v~d--~~---~-~~~~~~~p~~~~~~~~~~~~~~~v~~i~~~~~~~~d~~~~ 132 (150)
T 2hhz_A 74 ------LIQVVRVEGTARPVEN--DY---L-KTVFADNPYYQHIYKDESSDTMQVFQIYAGHGFYHSLTQG 132 (150)
T ss_dssp ------CCEEEEEEEEEEEECH--HH---H-HHHHTTCGGGGGGCC-----CCEEEEEEEEEEEEEEGGGT
T ss_pred ------eeEEEEEEEEEEECCc--HH---H-HHHHHhChhhhhcccCCCCCcEEEEEEEccEEEEEECCCC
Confidence 1267999999999974 23 2 356677888877764 3689999999999999875443
No 20
>2ig6_A NIMC/NIMA family protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: FMN; 1.80A {Clostridium acetobutylicum}
Probab=99.69 E-value=5.8e-16 Score=121.16 Aligned_cols=128 Identities=14% Similarity=0.107 Sum_probs=105.6
Q ss_pred HHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCC
Q 047182 44 DAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTC 123 (207)
Q Consensus 44 ~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~ 123 (207)
...++++++|.++++++|||++ + |.|++.+|.|. ...+|.+||+++..++|++||++||+|+|++....
T Consensus 18 ~~~~~~~~~l~~~~~~~LaTv~-d--G~P~~rpv~~~----~~~~~~l~f~t~~~s~K~~~l~~np~V~l~~~~~~---- 86 (150)
T 2ig6_A 18 QGMKRALEFLKECGVFYLATNE-G--DQPRVRPFGAV----FEYEGKLYIVSNNTKKCFKQMIQNPKVEISGMNKK---- 86 (150)
T ss_dssp HHHHHHHHHHHHHCSEEEEEEE-T--TEEEEEEECCC----EEETTEEEEEEETTSHHHHHHHHCCEEEEEEECTT----
T ss_pred cCHHHHHHHHHhCCeEEEEEcc-C--CceEEEEeEEE----EEcCCEEEEEeCCCcHHHHHHHHCCCEEEEEEcCC----
Confidence 3457799999999999999998 4 99999999997 44467899999999999999999999999998653
Q ss_pred CCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCC--CCCCeEEEEEEEeEEEEeccCCCcee
Q 047182 124 GKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWP--KDHNFQTFKLEIDDIFLINWFGGPKP 196 (207)
Q Consensus 124 ~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~--~~~df~~~rl~~~~~~~V~GFG~a~~ 196 (207)
...|++.|+++.+++. + .++.++.++|.++.|. +.+++.+++|+|.++.|-+.-|+...
T Consensus 87 ---------~~~v~i~G~a~~v~d~-e----~~~~~~~~~p~~~~~~~~~dp~~~l~~v~~~~a~~wd~~~~p~~ 147 (150)
T 2ig6_A 87 ---------GQWIRLTGEVANDDRR-E----VKELALEAVPSLKNMYSVDDGIFAVLYFTKGEGTICSFKGENET 147 (150)
T ss_dssp ---------SCEEEEEEEEEECCCH-H----HHHHHHHHSGGGGGTCCTTSSCEEEEEEEEEEEEEECSSSCCEE
T ss_pred ---------CeEEEEEEEEEEECCH-H----HHHHHHHhChHHHHhhcCCCCcEEEEEEECCEEEEEeCCCCceE
Confidence 1579999999999752 2 2455666679888775 34789999999999999987665433
No 21
>3fkh_A Putative pyridoxamine 5'-phosphate oxidase; NP_601736.1, STR genomics, joint center for structural genomics, JCSG; HET: P33; 2.51A {Corynebacterium glutamicum atcc 13032}
Probab=99.66 E-value=1.3e-15 Score=118.18 Aligned_cols=115 Identities=12% Similarity=0.074 Sum_probs=88.3
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGK 125 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~ 125 (207)
.+++++||+++.+|.|||+. +|.||+.+++|+ .+ ++.+||+++. +.|..||.+||+|||.|+..+.
T Consensus 11 ~~e~~~lL~~~~~g~La~~~---dg~P~vvPv~f~----~~-~~~iyfh~a~-g~K~~~i~~~~~V~f~vd~~~~----- 76 (138)
T 3fkh_A 11 EQEALERLQSVSLGRVVVRR---SDEMDIFPVNFI----VD-KGAIYIRTAE-GNKLFSMNLNHDVLFEADEVKD----- 76 (138)
T ss_dssp HHHHHHHHTTCSEEEEEEEE---TTEEEEEEEEEE----EE-TTEEEEEEEC---------CCSEEEEEEEEEET-----
T ss_pred HHHHHHHHccCCEEEEEEee---CCEEEEEEEEEE----EE-CCEEEEEeCC-ChHHHHhhcCCCEEEEEEECCC-----
Confidence 57899999999999999997 499999999999 44 5899999998 7899999999999999998653
Q ss_pred CCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEE
Q 047182 126 RDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIF 186 (207)
Q Consensus 126 ~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~ 186 (207)
+ ..-+|+++|+++.|++ .+|..++.+. ....|.+.....++||+|+++.
T Consensus 77 -~----~~~SV~v~G~a~~v~d-~~e~~~a~~~------~~~~~~~~~~~~~irI~p~~it 125 (138)
T 3fkh_A 77 -G----KAWSVVVRATAEIVRK-LDEIAYADTL------ELKPWIPTLKYNYVRIVPNEIT 125 (138)
T ss_dssp -T----EEEEEEEEEEEEECCS-HHHHHHHHHS------CCCCSSCCSSEEEEEEEEEEEE
T ss_pred -C----CCEEEEEEEEEEEECC-HHHHHHHHhc------ccCCCCCCCccEEEEEEEEEEE
Confidence 1 1129999999999986 4565555433 2567777889999999999987
No 22
>3dmb_A Putative general stress protein 26 with A PNP-OXI fold; PNP-oxidase like fold, structural genomics; HET: MSE; 2.30A {Xanthomonas campestris PV}
Probab=99.66 E-value=1.7e-15 Score=117.97 Aligned_cols=132 Identities=11% Similarity=0.017 Sum_probs=106.7
Q ss_pred CCCchHHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCC--CCCcEEEEEeCCCcchhhhccCCCeEEEEe
Q 047182 39 KPHPNDAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNE--GSGVPYFYLTTLDPTASNALKDKRSSLAIS 116 (207)
Q Consensus 39 ~~~~~~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~--~~g~~y~~~s~~s~h~~NL~~nprvSl~V~ 116 (207)
++...+..+.++++|+.+++++|||++. +| |++++|.+. .+ .+|.+||+++..++|++||++||+|+|++.
T Consensus 2 m~~~~~l~~~~~~~l~~~~~~~LaT~~~--d~-~~~~pm~~~----~~~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~ 74 (147)
T 3dmb_A 2 MADPKELQDKFWKALKSDRTVMLGLDGV--ED-GHARPMTAQ----IEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFS 74 (147)
T ss_dssp TTSHHHHHHHHHHHHHHHCEEEEEETTS--SS-CCCEEEEEE----CSSSSCCCEEEEECTTCTTHHHHTTCEEEEEEEE
T ss_pred CCChHHHHHHHHHHHhcCCEEEEEEEcC--CC-CceEeCccc----cccCCCceEEEEecCCcHHHHHHhhCCeEEEEEE
Confidence 4566788899999999999999999986 34 899999997 43 368999999999999999999999999998
Q ss_pred eCCCCCCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHh-CCCCCCCCCCCCeEEEEEEEeEEEEeccCCC
Q 047182 117 EYPLGTCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAK-HPEMKGWPKDHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 117 ~~~~~~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~r-hP~~~~~~~~~df~~~rl~~~~~~~V~GFG~ 193 (207)
.... ..-+++.|+++.+++ .+..+++.+.+.++ +|+. .+.+++.+++|+|+++.|-++-|.
T Consensus 75 ~~~~------------~~~v~v~G~a~~~~d-~~~~~~~~~~~~~~~~~~g---~~dp~~~vl~v~p~~~e~W~~~~~ 136 (147)
T 3dmb_A 75 SKGH------------DLFASISGSLREDTD-PAVVDRLWNPYVAAWYEGG---KDDPKLALLRLDADHAQIWLNGSS 136 (147)
T ss_dssp CTTS------------SEEEEEEEEEEECCC-HHHHHHHCCHHHHHHCTTG---GGCTTCEEEEEEEEEEEEEECCCC
T ss_pred cCCC------------CeEEEEEEEEEEecC-HHHHHHHhhHHHHHHccCC---CCCCCEEEEEEEcCEEEEEECCCC
Confidence 7653 146999999999875 44555554455554 4653 245789999999999999887665
No 23
>2fg9_A 5-nitroimidazole antibiotic resistance protein; STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: FAD; 2.20A {Bacteroides thetaiotaomicron} SCOP: b.45.1.1
Probab=99.64 E-value=3.1e-15 Score=119.94 Aligned_cols=132 Identities=11% Similarity=0.100 Sum_probs=102.8
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCC-C
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTC-G 124 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~-~ 124 (207)
.+++++||+++.+|+|||+++ +|.|++++++|+ .+ +|.+||+++..++|++||.+||+|+|++........ -
T Consensus 28 ~~ei~~~L~~~~~~~Lat~~~--dg~P~v~Pv~f~----~~-~~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~is~~ 100 (178)
T 2fg9_A 28 KQRIESIILQADACFVGITDL--EGNPYVVPMNFG----YE-NDTLYLHSGPEGGKIEMLQRNNNVCITFSLGHKLVYQH 100 (178)
T ss_dssp HHHHHHHHHHCSCEEEEEECT--TSCEEEEEECCE----EE-TTEEEEEECSCSHHHHHHHHCCEEEEEEECCCEEEEEC
T ss_pred HHHHHHHHHhCCEEEEEEECC--CCcEEEEEEEEE----EE-CCEEEEEcCCcchHHHHhhcCCcEEEEEEeCCceeecc
Confidence 367899999999999999986 599999999999 54 679999999999999999999999999987753100 0
Q ss_pred CCCCCC--CccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCC--C--CCCeEEEEEEEeEEE
Q 047182 125 KRDPED--PVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWP--K--DHNFQTFKLEIDDIF 186 (207)
Q Consensus 125 ~~dp~~--~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~--~--~~df~~~rl~~~~~~ 186 (207)
...+.. .....|++.|+++.+++ .++...+.+.+.++|+.. .|. . ...+.+|+|+|+++.
T Consensus 101 ~~~~~~~t~~y~sV~v~G~a~~v~d-~~e~~~~l~~l~~~y~~~-~~~~~~~~~~~~~v~rI~i~~it 166 (178)
T 2fg9_A 101 KQVACSYSMRSESAMCRGKVEFIED-MEEKRHALDIIMRHYTKD-QFSYSDPAVRNVKVWKVPVDQMT 166 (178)
T ss_dssp ----CEEEEEEEEEEEEEECEEECS-HHHHHHHHHHHHHTTCSS-CCCCCHHHHHTCEEEEEEEEEEE
T ss_pred CCCCCCCcccEEEEEEEEEEEEECC-HHHHHHHHHHHHHHhCCC-CCCcChHhhCCeEEEEEEeEEEE
Confidence 001111 14578999999999976 457778889999998542 232 1 257899999999886
No 24
>2aq6_A Pyridoxine 5'-phosphate oxidase; pyridoxal 5'-phosphate, STR genomics, PSI, protein structure initiative, TB structural consortium; HET: PLP; 1.70A {Mycobacterium tuberculosis} SCOP: b.45.1.1 PDB: 1xxo_A 1y30_A* 1w9a_A*
Probab=99.63 E-value=5.2e-15 Score=113.73 Aligned_cols=127 Identities=19% Similarity=0.181 Sum_probs=96.2
Q ss_pred HHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCC-CcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCC
Q 047182 45 AAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTC 123 (207)
Q Consensus 45 ~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~-g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~ 123 (207)
..++++++|+.+.+++|+|++. +|.|++++++|+ .+++ +.+||+.+..+.|++||.+||+|||++...+.
T Consensus 6 ~~~~~~~~l~~~~~~~LaT~~~--~G~P~~~pv~~~----~~~~~~~l~~~t~~~~~k~~~l~~np~v~l~~~~~~~--- 76 (147)
T 2aq6_A 6 FDDKLLAVISGNSIGVLATIKH--DGRPQLSNVQYH----FDPRKLLIQVSIAEPRAKTRNLRRDPRASILVDADDG--- 76 (147)
T ss_dssp HHHHHHHHHHTCSEEEEEEECT--TSCEEEEEEECE----EETTTTEEEEEEETTSHHHHHHHHCCEEEEEEECTTS---
T ss_pred ChHHHHHHHhcCCeEEEEEECC--CCCEEEEEEEEE----EcCCCCEEEEEecCCCHHHHHHhhCCcEEEEEEcCCC---
Confidence 3567999999999999999987 599999999999 5544 37999999999999999999999999987531
Q ss_pred CCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCC----CCCCCCC------CCCeEEEEEEEeEEEEec
Q 047182 124 GKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHP----EMKGWPK------DHNFQTFKLEIDDIFLIN 189 (207)
Q Consensus 124 ~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP----~~~~~~~------~~df~~~rl~~~~~~~V~ 189 (207)
...+++.|+++.+++++++...+.+.+.++|+ ....|.+ .+.+.+++|+|++++.-+
T Consensus 77 ---------~~~v~v~G~a~~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~~~~i~~~~ 143 (147)
T 2aq6_A 77 ---------WSYAVAEGTAQLTPPAAAPDDDTVEALIALYRNIAGEHSDWDDYRQAMVTDRRVLLTLPISHVYGLP 143 (147)
T ss_dssp ---------SCEEEEEEECEECCCCCSTTSHHHHHHHHHHHHHTCSCSCHHHHHHHHHHTTEEEEEEECCEEEEEC
T ss_pred ---------cEEEEEEEEEEEcCCCCCccHHHHHHHHHHHHhccCCCCchhHHHHhcccCceEEEEEEEEEEEccc
Confidence 14799999999997642122233344444432 1223321 268999999999998654
No 25
>2hq9_A MLL6688 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FAD; 1.95A {Mesorhizobium loti} SCOP: b.45.1.1
Probab=99.62 E-value=4.4e-15 Score=115.15 Aligned_cols=122 Identities=15% Similarity=0.181 Sum_probs=91.1
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGK 125 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~ 125 (207)
.+++++||+++.+|+|||++ +|.|++++++|+ .+ +|.+||+. ..++|++||.+||+|||++......
T Consensus 9 ~~~~~~~L~~~~~~~Lat~~---~g~P~~~pv~~~----~~-~~~l~~~t-~~~~k~~~l~~~p~V~~~v~~~~~~---- 75 (149)
T 2hq9_A 9 ALECTKVLTANRVGRLACAK---DGQPYVVPLYYA----YS-DAHLYAFS-MPGKKIEWMRANPRVSVQVDEHGQG---- 75 (149)
T ss_dssp HHHHHHHHHHCCEEEEEEEE---TTEEEEEEEECE----EE-TTEEEEEE-CSSHHHHHHHHCCEEEEEEEEECST----
T ss_pred HHHHHHHHHhCCEEEEEEcc---CCeEEEEEEEEE----EE-CCEEEEEe-CccHHHHHHhcCCcEEEEEEecCCC----
Confidence 36789999999999999997 499999999999 55 68999995 7789999999999999999986421
Q ss_pred CCCCCCccceEEEEEEEEEecCChH---HHHHHHHHHHHhCC-----C-CCCCCC----CCCeEEEEEEEeEEE
Q 047182 126 RDPEDPVCAKITLTGKLVLVDVNSK---AAEFARNALFAKHP-----E-MKGWPK----DHNFQTFKLEIDDIF 186 (207)
Q Consensus 126 ~dp~~~~~~Rvtl~G~~~~v~~~~~---e~~~a~~~~~~rhP-----~-~~~~~~----~~df~~~rl~~~~~~ 186 (207)
....+|++.|+++.++++++ +...+.+ +..||+ . .+.|.. .....+++|+|+++.
T Consensus 76 -----~~y~sV~v~G~a~~v~d~~~~~~~~~~~l~-l~~ky~~~w~~~~~~~~~~~~~~~~~~~v~ri~~~~i~ 143 (149)
T 2hq9_A 76 -----RGWKSVVVDGRYEELPDLIGHKLQRDHAWS-VLSKHTDWWEPGALKPVTPPTADSAPHVFFRILIEQVS 143 (149)
T ss_dssp -----TCEEEEEEEEEEEECCSCGGGHHHHHHHHH-HHHHHHHHHC--------------CCCEEEEEEEEEEE
T ss_pred -----CcEEEEEEEEEEEEEcCcccchHHHHHHHH-HHHhcccccCCCcccccccccccCCceEEEEEEeEEeE
Confidence 14578999999999987542 2222222 666663 2 223321 356689999999875
No 26
>2qea_A Putative general stress protein 26; structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.46A {Jannaschia SP}
Probab=99.62 E-value=1.2e-14 Score=114.46 Aligned_cols=124 Identities=11% Similarity=-0.052 Sum_probs=102.0
Q ss_pred HHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCc-EEEEEeCCCcchhhhccCCC-eEEEEeeCCCCC
Q 047182 45 AAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGV-PYFYLTTLDPTASNALKDKR-SSLAISEYPLGT 122 (207)
Q Consensus 45 ~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~-~y~~~s~~s~h~~NL~~npr-vSl~V~~~~~~~ 122 (207)
..++++++|+++++++||| + |.|++.+|.|.+ .+.+|. +||+++..++|.+||++||+ |||++.....
T Consensus 5 ~~~~~~~~L~~~~~~~LaT---d--G~P~~rpv~~~~---~~~~g~~l~f~t~~~s~K~~~l~~np~~v~l~~~~~~~-- 74 (160)
T 2qea_A 5 LTHEFWDRLEDVRSGMLGI---K--GQGRLIPMSPQT---DDDAPGAIWFITAKGTDLAKGVAAGPQPAQFVVSDDGE-- 74 (160)
T ss_dssp HHHHHHHHHTTCCCEEEEE---T--TSSCCEEECCBC---CTTSCSCEEEEEETTSHHHHHTSSSCEEEEEEEEETTT--
T ss_pred HHHHHHHHHhcCCEEEEEe---C--CCeeEEEeeeeE---ecCCCCEEEEEECCCCHHHHHHHhCCceEEEEEECCCC--
Confidence 4678999999999999999 2 999999999971 245788 99999999999999999999 9999987642
Q ss_pred CCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhC-CCCCCCCCCCCeEEEEEEEeEEEEeccCC
Q 047182 123 CGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKH-PEMKGWPKDHNFQTFKLEIDDIFLINWFG 192 (207)
Q Consensus 123 ~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rh-P~~~~~~~~~df~~~rl~~~~~~~V~GFG 192 (207)
...+++.|+++.+++ .++.+++.+.+.+++ |.. ...+++.+++|+|+++.+-++-+
T Consensus 75 ----------~~~v~v~G~a~~v~d-~~~~~~~~~~~~~~~~~~~---~~~p~~~v~~i~p~~~e~w~~~~ 131 (160)
T 2qea_A 75 ----------GLYADLDGTLERSTD-REALDEFWSFVADAWFDGG---QHDPDVCLLKFTPASGEISITEG 131 (160)
T ss_dssp ----------TEEEEEEEEEEEECC-HHHHHHSCCHHHHHHCTTC---SSCTTEEEEEEEEEEEEEEEECC
T ss_pred ----------CeEEEEEEEEEEEcC-HHHHHHHHHHHHHHHccCC---CCCCCEEEEEEECCEEEEEECCC
Confidence 256899999999976 456666666666654 653 34578999999999999988754
No 27
>3cp3_A Uncharacterized protein; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.00A {Corynebacterium diphtheriae nctc 13129ORGANISM_TAXID}
Probab=99.62 E-value=6.8e-15 Score=114.28 Aligned_cols=118 Identities=13% Similarity=0.098 Sum_probs=92.8
Q ss_pred HHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCC---CCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCC
Q 047182 45 AAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEG---SGVPYFYLTTLDPTASNALKDKRSSLAISEYPLG 121 (207)
Q Consensus 45 ~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~---~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~ 121 (207)
-.+++++||+++.+|+|||+. +|.||+++|+|+ .+. +|.+||+++ .++|.+||.+||+|+|.+.....
T Consensus 16 ~~~e~~~~L~~~~~~~Lat~~---dg~P~v~Pv~f~----~~~~~~~~~lyf~ta-~~~K~~~l~~np~V~~~v~~~~~- 86 (148)
T 3cp3_A 16 DSSDSLSRLSSESVGRLVVHR---KDDLDIFPVNFV----LDYSAEQPRVYFRTA-EGTKLFSVNLNSDVLFEVDRFDD- 86 (148)
T ss_dssp CHHHHHHHHHTCSEEEEEEEE---TTEEEEEEEEEE----EECSSSSCEEEEEEC---CCSSCTTSCSEEEEEEEECC--
T ss_pred CHHHHHHHHhcCCEEEEEEEe---CCEEEEEEEEEE----EEecCCCCEEEEEcC-CCchHHHHhcCCcEEEEEEECCC-
Confidence 346799999999999999995 599999999998 332 689999999 89999999999999999998542
Q ss_pred CCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEE
Q 047182 122 TCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFL 187 (207)
Q Consensus 122 ~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~ 187 (207)
+ ....|++.|+++.+++ .+|..++.+. .++.|.+.+.+.++||+|+++.-
T Consensus 87 ------~---~~~sV~v~G~a~~v~d-~~e~~~~l~~------~~~~~~~~~~~~viri~~~~~tg 136 (148)
T 3cp3_A 87 ------A---EGWSVVLKGNAYVVRD-TEEARHADTL------GLKPWLPTLKYNFVRIDVREVSG 136 (148)
T ss_dssp ----------CEEEEEEEEEEEECCC-HHHHHHHTTS------CCCCCCTTCCCEEEEEEEEEEEE
T ss_pred ------C---CCeEEEEEEEEEEECC-HHHHHHHHhc------cccccCCCCceEEEEEEeEEEEE
Confidence 1 1248999999999976 3444443332 34667777899999999999873
No 28
>2hti_A BH0577 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, FMN-binding protein; HET: FAD; 2.50A {Bacillus halodurans} SCOP: b.45.1.1
Probab=99.61 E-value=1.5e-14 Score=116.34 Aligned_cols=129 Identities=12% Similarity=0.118 Sum_probs=98.9
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeC----CCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEY----PLG 121 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~----~~~ 121 (207)
.+.+++||.++.+|+|||++ +|.|++++++|+ .+ +|.+||+++..++|++||.+||+|+|+|... ...
T Consensus 15 ~e~i~~~L~~~~~~~Lat~~---~g~P~~~Pv~f~----~~-~~~ly~hta~~~~k~~~l~~np~V~~~v~~~~~~~~~~ 86 (185)
T 2hti_A 15 EKKITEFLNKARTGFLGLST---NDQPYVIPLNFV----WH-NHAIYFHGASEGRKIKMIEANPEVCFTICEDLGTIVSP 86 (185)
T ss_dssp HHHHHHHHHHCCCEEEEEEE---TTEEEEEEECCE----EE-TTEEEEEEESSSHHHHHHHHCCEEEEEEEECC------
T ss_pred HHHHHHHHhcCCEEEEEEee---CCEEEEEEEEEE----EE-CCEEEEEeCCcCHHHHHhhcCCeEEEEEEecccccccc
Confidence 34589999999999999998 389999999999 54 5899999999999999999999999999987 421
Q ss_pred -CCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhC-CCC-------CC---CCC--CCCeEEEEEEEeEEEE
Q 047182 122 -TCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKH-PEM-------KG---WPK--DHNFQTFKLEIDDIFL 187 (207)
Q Consensus 122 -~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rh-P~~-------~~---~~~--~~df~~~rl~~~~~~~ 187 (207)
.|. +......|++.|+++.+++ .+|...+.+.+.++| |.. .. +.+ .....+++|+|+++.-
T Consensus 87 v~~~----~t~~y~sV~v~G~a~~v~d-~~e~~~~l~~l~~~y~~~~~~~p~~~~~~~~~~~~~~~~~~v~rI~i~~itg 161 (185)
T 2hti_A 87 VPAH----TDTAYMSVIIFGTIEPVSA-IEEGTEAMQQMLDKYVPGYYHSPLAASHVEKYRSSLGSRTAIYKISCRERTA 161 (185)
T ss_dssp -----------CEEEEEEEEEEEECCC-HHHHHHHHHHHHHHHCC-----------------CCCSSEEEEEEEEEEEEE
T ss_pred cccc----CcceEEEEEEEEEEEEECC-HHHHHHHHHHHHHHhCCCCCCcccchhhccccchHHhCCeEEEEEEeEEEEE
Confidence 110 1125678999999999975 457778888888887 543 11 111 3568999999998873
No 29
>3u35_A General stress protein; PNP-oxidase like fold, FMN/FAD, protein BI; HET: PGE; 2.50A {Xanthomonas axonopodis PV} PDB: 3u34_A*
Probab=99.60 E-value=1.1e-14 Score=117.81 Aligned_cols=130 Identities=12% Similarity=0.010 Sum_probs=103.9
Q ss_pred CchHHHHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCC--CCCcEEEEEeCCCcchhhhccCCCeEEEEeeC
Q 047182 41 HPNDAAAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNE--GSGVPYFYLTTLDPTASNALKDKRSSLAISEY 118 (207)
Q Consensus 41 ~~~~~~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~--~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~ 118 (207)
+.+++.+.+.+||+.+++|+|||++. +| |++.+|.|. .+ .+|.+||+++..+.|++||++||+|+|++.+.
T Consensus 23 ~~~el~e~i~~~L~~~~~~~LaTv~~--dg-p~~rpm~~~----~d~d~~g~l~F~T~~~s~K~~~l~~np~v~l~~~~~ 95 (182)
T 3u35_A 23 DTKELQEKFWKALKSDRTVMLGLDGV--ED-GHARPMTAQ----IEGDSGGPIWFFTSKDNALIAMLGQGRRVIGAFSSK 95 (182)
T ss_dssp -CHHHHHHHHHHHHHHCEEEECCTTS--GG-GCCEEEECB----CSSSSCSCEEEEEETTCGGGGGCTTCEEEEEEEECT
T ss_pred ChHHHHHHHHHHHccCCEEEEEEecC--CC-CcEEEEEEE----EeecCCCEEEEEECCCCHHHHHHHHCCcEEEEEECC
Confidence 44788899999999999999999986 34 899999997 43 36899999999999999999999999999876
Q ss_pred CCCCCCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHh-CCCCCCCCCCCCeEEEEEEEeEEEEeccCCC
Q 047182 119 PLGTCGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAK-HPEMKGWPKDHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 119 ~~~~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~r-hP~~~~~~~~~df~~~rl~~~~~~~V~GFG~ 193 (207)
.. ..-|++.|+++.+++ .+..+++-..+.++ +|+. .+.+++.+++|+|+++.|-++.++
T Consensus 96 ~~------------~~~V~v~G~a~vv~D-~e~~~~lw~~~~~~~~p~g---~~dP~~~vlrv~p~~~e~Wd~~~~ 155 (182)
T 3u35_A 96 GH------------DLFASISGSLREDTD-PAMVDRLWNPYVAAWYEGG---KTDPNLALLRLDADHAQIWLNESS 155 (182)
T ss_dssp TS------------SEEEEEEEEEEECCC-HHHHHHHCCHHHHTTCTTG---GGCTTEEEEEEEEEEEEEEEEEEE
T ss_pred CC------------CeEEEEEEEEEEEcC-HHHHHHHHHHHHHHhccCC---CCCCCEEEEEEEeCEEEEEeCCCC
Confidence 43 146999999999865 44455554445544 3543 245799999999999999997654
No 30
>2htd_A Predicted flavin-nucleotide-binding protein from family structurally related to pyridoxine...; putative pyridoxamine 5'-phosphate oxidase; HET: MSE; 1.60A {Lactobacillus delbrueckii subsp}
Probab=99.54 E-value=2.3e-13 Score=105.08 Aligned_cols=111 Identities=14% Similarity=0.130 Sum_probs=88.4
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGK 125 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~ 125 (207)
.+.++++|++ ++++|||+++ +|.|+++++.|+. ..+++.+||.....+.|++||++||+|+|++.+.+.
T Consensus 29 ~~~~~~~l~~-~~~~LATv~~--dG~P~~~p~~f~~---~~d~~~l~f~~~~~~~k~~nL~~np~V~l~~~~~~~----- 97 (140)
T 2htd_A 29 TEEQVNLFKN-NLVYLATVDA--DGNPQVGPKGSMT---VLDPSHLQYLEKTKGEAYENIKRGSKVALVAADVPS----- 97 (140)
T ss_dssp CHHHHHHHHH-SCEEEEEECT--TCCEEEEEETTCE---EEETTEEEEEESSCCHHHHHHHTTCCEEEEEEETTT-----
T ss_pred CHHHHHHHhC-CCEEEEEECC--CCCEEEecceeEE---ecCCCEEEEeccCCchHHHHhhcCCeEEEEEEecCC-----
Confidence 3567899999 9999999997 5999999999951 124688999999999999999999999999998863
Q ss_pred CCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEE
Q 047182 126 RDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIF 186 (207)
Q Consensus 126 ~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~ 186 (207)
..++++.|+++.++++ ++++++ ..++ +.+...+++|+|++++
T Consensus 98 -------~~~v~i~G~a~~v~d~-~~~~~l----~~~~-------~~p~~~vi~i~v~~v~ 139 (140)
T 2htd_A 98 -------HTAVRVLATAEVHEDD-DYAKKV----LAKT-------EFPNAFVVNLNIEEVF 139 (140)
T ss_dssp -------TEEEEEEEEEEEESSS-HHHHHH----HTTS-------SCTTSEEEEEEEEEEE
T ss_pred -------CCEEEEEEEEEEecCh-HHHHHH----hhCC-------CCceEEEEEEEEEEee
Confidence 2689999999999874 454443 2111 2244588999999886
No 31
>2fur_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Thermoplasma acidophilum} SCOP: b.45.1.1
Probab=99.54 E-value=4.1e-14 Score=116.29 Aligned_cols=132 Identities=11% Similarity=0.004 Sum_probs=102.5
Q ss_pred HHHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCC
Q 047182 46 AAYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGK 125 (207)
Q Consensus 46 ~~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~ 125 (207)
.+++++||+++.+|+|||++ +|.||+++++|+ .+ ++.+||+++..++|++||.+||+|+|++......- ..
T Consensus 22 ~~ei~~~L~~~~~~~Lat~~---dg~P~v~Pv~f~----~~-~~~lyfhta~~~~k~~~l~~np~V~~~v~~~~~~v-~~ 92 (209)
T 2fur_A 22 DEDLVAMLDRNFTCTVSFID---GGIPYAIPMMLA----SE-GKTIYLHGSMKSRIYGILKTGQLIAISLLEINGIV-LA 92 (209)
T ss_dssp HHHHHHHHHHCSEEEEEEEE---TTEEEEEEEECE----EE-TTEEEEEEETTSHHHHHHHTTCCEEEEEEEEEEEE-EC
T ss_pred HHHHHHHHHhCCEEEEEEcc---CCEEEEEEEEEE----EE-CCEEEEEeCCcCHHHHHhhcCCeEEEEEEcCCeee-cC
Confidence 35789999999999999998 499999999999 44 58999999999999999999999999998765310 00
Q ss_pred CCCC--CCccceEEEEEEEEEecCChHHHHHHHHHHHHhC-CCCC----CCCC--CCCeEEEEEEEeEEEE
Q 047182 126 RDPE--DPVCAKITLTGKLVLVDVNSKAAEFARNALFAKH-PEMK----GWPK--DHNFQTFKLEIDDIFL 187 (207)
Q Consensus 126 ~dp~--~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rh-P~~~----~~~~--~~df~~~rl~~~~~~~ 187 (207)
..+. ......|++.|+++.+++ .+|...+.+.+.++| |.-. .+.. .....+++|+|+++.-
T Consensus 93 ~~~~~~t~~y~sV~v~G~a~~v~d-~~e~~~~l~~l~~~y~p~~~~~~~~~~~~~~~~~~virI~i~~isg 162 (209)
T 2fur_A 93 KEIKNNSINYVSALIFGRPYEIDD-TEKKIEVFRLLTEKLVKGRWDNSIKPSYEDLNGVFVFAVKPETFSM 162 (209)
T ss_dssp SBGGGCEEEEEEEEEEECCEECCC-HHHHHHHHHHHHHHHSTTTGGGSBCCCHHHHHTEEEEEECEEEEEE
T ss_pred CCCCCCccEEEEEEEEEEEEEECC-HHHHHHHHHHHHHHhCCCcccccchhhHHhhCCEEEEEEEeEEEEE
Confidence 0010 124678999999999976 457778888888887 6521 1221 2578999999999874
No 32
>2q9k_A Uncharacterized protein; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: UNL; 1.59A {Exiguobacterium sibiricum}
Probab=99.51 E-value=2e-13 Score=107.16 Aligned_cols=108 Identities=12% Similarity=0.029 Sum_probs=90.7
Q ss_pred HHHHHHHhcCCeEEEEeecCCCC-CCeeEEEeccccCCCC-CCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCC
Q 047182 47 AYARWLVSQNSWGVLSTISSGLG-GAPFGNVVSFSDGLPN-EGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCG 124 (207)
Q Consensus 47 ~~ar~LL~~~~~~vLAT~s~~~~-G~P~~S~v~y~dg~~~-~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~ 124 (207)
+++++||+++++++|||+++ + |.|+++++.|+ . .++|.+||+++..++|++||++||+|||++.+++.
T Consensus 12 ~e~~elL~~~~~~~LATv~~--d~G~P~~sp~~~~----~~~d~~~l~f~~~~~~~k~~nl~~np~Vsl~v~~~~~---- 81 (151)
T 2q9k_A 12 EQQMKALTDLPLVFLITHDQ--SKSWPITHAISWV----YAKDETTIRFAIEADSLLVKTLADHPVFTLIFFADQS---- 81 (151)
T ss_dssp HHHHHHTSSCCCEEEEECCT--TSSSCEEEEECCE----EEEETTEEEEEEETTCTHHHHHHHSCCEEEEEEETTE----
T ss_pred HHHHHHHhcCCEEEEEEEcC--CCCcEeEeeeEEE----EEeCCCEEEEEECCCcHHHHHHHhCCcEEEEEECCCC----
Confidence 47899999999999999997 7 99999999987 2 23689999999999999999999999999987642
Q ss_pred CCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEEeccCCC
Q 047182 125 KRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 125 ~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~V~GFG~ 193 (207)
.+.+.|+++.+.+.. + +.|. +..+++++|++++-+...|.
T Consensus 82 ----------~~~i~G~A~~v~d~~-e---------------~~~~---~~~li~v~i~~v~~~~f~g~ 121 (151)
T 2q9k_A 82 ----------TYSLTCTDVAAWETT-A---------------RLPL---KVALYEGQIKEVRDILFYGA 121 (151)
T ss_dssp ----------EEEEEEEEEEEECCS-S---------------CCSS---CEEEEEEEEEEEEECSCTTC
T ss_pred ----------EEEEEEEEEEEeCcc-c---------------cCCc---ceEEEEEEEEEEEEccccCc
Confidence 478999999998642 1 1233 66899999999999876665
No 33
>2vpa_A NIMA-related protein; cofactor, atomic resolution, antibiotic resistance, oxidoreductase; 1.2A {Deinococcus radiodurans} SCOP: b.45.1.1 PDB: 1w3p_A 1w3q_A 1w3r_A* 1w3o_A 2x1k_A 2x1j_A
Probab=99.49 E-value=7e-14 Score=115.72 Aligned_cols=135 Identities=15% Similarity=0.156 Sum_probs=103.7
Q ss_pred HHHHHHHHHHhcCCeEEEEeec----CCCCCCeeEEEeccccCCCCCCCCc--EEEEEeCCCcchhhhccCCCeEEEEee
Q 047182 44 DAAAYARWLVSQNSWGVLSTIS----SGLGGAPFGNVVSFSDGLPNEGSGV--PYFYLTTLDPTASNALKDKRSSLAISE 117 (207)
Q Consensus 44 ~~~~~ar~LL~~~~~~vLAT~s----~~~~G~P~~S~v~y~dg~~~~~~g~--~y~~~s~~s~h~~NL~~nprvSl~V~~ 117 (207)
.-.+++++||+++.+|+|||++ + +|.|++++++|+ .+ +|. +||+++..++|++||.+||+|+|+|..
T Consensus 43 ~d~~ei~~~L~~~~~~~Lat~~~~~~~--dg~P~v~Pv~f~----~d-~~~~~Lyfhta~~~~K~~~l~~np~V~~~v~~ 115 (216)
T 2vpa_A 43 QSDEWIRELLLRGTIARVATLWQGEDG--AAFPFITPLAYA----YR-PEQGDLVYHTNVVGRLRANAGQGHPATLEVSE 115 (216)
T ss_dssp CCHHHHHHHHHHCCEEEEEEEEECTTS--CEEEEEEEEECE----EE-TTTTEEEEECCCCCSSBSSCSSEEEEEEEEEE
T ss_pred CCHHHHHHHHHhCCEEEEEEccCCCCC--CCceEEEEEEEE----EE-CCeeEEEEEecCcCHHHHHhccCCcEEEEEEe
Confidence 4467899999999999999998 4 599999999999 44 556 999999999999999999999999988
Q ss_pred CCCCCCCCCCCC--CCccceEEEEEEEEEecCChHHHHHHHHHHHHhC-CCCC------CCCC--CCCeEEEEEEEeEEE
Q 047182 118 YPLGTCGKRDPE--DPVCAKITLTGKLVLVDVNSKAAEFARNALFAKH-PEMK------GWPK--DHNFQTFKLEIDDIF 186 (207)
Q Consensus 118 ~~~~~~~~~dp~--~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rh-P~~~------~~~~--~~df~~~rl~~~~~~ 186 (207)
..... ....+. ......|.+.|+++.+ + .+|..++.+.+.++| |... .+.. ...+.+++|+|+++.
T Consensus 116 ~~~~v-~~~~~~~~t~~y~sV~v~G~a~~v-d-~~e~~~~l~~l~~~y~p~~~~~~~~~~~~~~~l~~~~virI~i~~it 192 (216)
T 2vpa_A 116 IGQFL-PSNSPLELSVQYRSVMVFGTARVL-A-GEDARAALTTLSERVFPGLKVGETTRPISEDDLKRTSVYSLSIDRWS 192 (216)
T ss_dssp EEEEE-CCSSGGGCEEEEEEEEEEEEEEEC-C-HHHHHHHHHHHHHHHSTTCCBTTTBCCCCHHHHHTCCEEEEEEEEEE
T ss_pred CCeec-cCccCCCCcccEEEEEEEEEEEEE-C-HHHHHHHHHHHHHHhCCCCccccccchhhHHhhCCeEEEEEEeeEEE
Confidence 75310 000010 1236889999999999 5 567788889998887 6421 1221 246789999999887
Q ss_pred Ee
Q 047182 187 LI 188 (207)
Q Consensus 187 ~V 188 (207)
--
T Consensus 193 gK 194 (216)
T 2vpa_A 193 GK 194 (216)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 34
>3ba3_A Protein LP_0091, pyridoxamine 5'-phosphate oxidase-like protein; NP_783940.1, structural genomics; HET: MSE; 1.55A {Lactobacillus plantarum WCFS1}
Probab=99.38 E-value=3.8e-12 Score=99.40 Aligned_cols=130 Identities=14% Similarity=0.083 Sum_probs=103.9
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCCC
Q 047182 47 AYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGKR 126 (207)
Q Consensus 47 ~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~~ 126 (207)
+.+.++|.+++.++|||.. +|.|.+.+|.|. .+...++.+||.++..+.++++|.+||+|+|+....+.. .
T Consensus 5 ~~i~~~L~~~~~~~LAT~~---~g~P~vR~v~f~--~~~~~~~~LYF~T~~~k~k~~ql~~Np~V~i~~~~~d~~---~- 75 (145)
T 3ba3_A 5 SLLKQVVQSTNKIALSTAV---NNEADVKIVNFV--WYEAQPDTLYFSSVKTSPALKVYDQNPDIAFITIPNDGT---A- 75 (145)
T ss_dssp HHHHHHHHTEEEEEEEEEE---TTEEEEEEEECE--ECTTSTTEEEEEEETTCTHHHHHTTCCEEEEEEEECTTC---T-
T ss_pred HHHHHHHHhCCcEEEEECC---CCCEEEEEEEEE--EEecCCCEEEEEECCCCHHHHHHHhCCCEEEEEECCCCC---c-
Confidence 4678899999999999954 599999999986 002457899999999999999999999999986654420 0
Q ss_pred CCCCCccceEEEE-EEEEEecCChHHHHHHHHHHHHhCCCCCCCCC--CCCeEEEEEEEeEEEEeccCCC
Q 047182 127 DPEDPVCAKITLT-GKLVLVDVNSKAAEFARNALFAKHPEMKGWPK--DHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 127 dp~~~~~~Rvtl~-G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~--~~df~~~rl~~~~~~~V~GFG~ 193 (207)
...-|.+. |+++..+++. ..+++.++++.|.++.+.+ ...+.+|+|.+..+.+.++=|+
T Consensus 76 -----~~~~IRi~~G~a~~~~~~~---~~~k~~~~e~~P~~k~~y~~~~~~l~vf~i~~~~a~~~~~~~~ 137 (145)
T 3ba3_A 76 -----GNPYLRAQHVKLQRSTKTM---TDLLPQYLETVPNYQQVWDAIGSTLVVFELKLTDLFVDAGVGG 137 (145)
T ss_dssp -----TCCEEEEEEEEEEECSCCH---HHHHHHHHHHSTTHHHHHHHHGGGEEEEEEECSEEEEECCTTC
T ss_pred -----cceEEEEEeEEEEEcCCch---HHHHHHHHHhChhhhhcccCCCCcEEEEEEECCEEEEECCCCC
Confidence 23568889 9999975432 3478999999999988865 3579999999999999995443
No 35
>2ol5_A PAI 2 protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.50A {Geobacillus stearothermophilus}
Probab=99.36 E-value=7.4e-12 Score=102.55 Aligned_cols=130 Identities=12% Similarity=0.096 Sum_probs=102.3
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCC-CcEEEEEeCCCcchhhhccCCCeEEEEeeCCCC----
Q 047182 47 AYARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTLDPTASNALKDKRSSLAISEYPLG---- 121 (207)
Q Consensus 47 ~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~-g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~---- 121 (207)
+++.+||+++.+|+|+|.+ +|.||+++++|+ .+++ +.+|||+++.++++++|.+ ++|++++.....-
T Consensus 13 ~~i~~il~~~~~g~L~~~~---~~~py~~plpf~----~~~~~~~Ly~H~A~~n~k~~~l~~-~~V~~~~~g~~~yisps 84 (202)
T 2ol5_A 13 DVAYQVIEENSFATLVSMH---QRELFATHLPLL----LDREKTCLYGHFARSNPQWNDIQH-QTVLAIFHGPHCYISPS 84 (202)
T ss_dssp THHHHHHHHSCEEEEEEEE---TTEEEEEEEECE----ECTTSSEEEEEEETTSGGGGGCTT-SCEEEEEEEEEEEECGG
T ss_pred HHHHHHHHHCCEEEEEEcc---CCccEEEEeeEE----EECCCCEEEEEECCcChHHHhhCC-CCEEEEEEcCCEEechh
Confidence 4688999999999999998 479999999999 4432 4899999999999999999 9999999877531
Q ss_pred -C-CCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhC-CCC-CCC--------CC--CCCeEEEEEEEeEEE
Q 047182 122 -T-CGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKH-PEM-KGW--------PK--DHNFQTFKLEIDDIF 186 (207)
Q Consensus 122 -~-~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rh-P~~-~~~--------~~--~~df~~~rl~~~~~~ 186 (207)
+ +++..| ......|.++|+++.+++ ++|...+++.+.++| |.. ..| .+ ...+..++|+|+++.
T Consensus 85 ~y~~~~~vp-T~nY~SV~~~G~~~~v~D-~~ek~~~L~~L~~~~e~~~~~~w~~~~~~~~~~~~l~~i~v~~I~I~~i~ 161 (202)
T 2ol5_A 85 WYETNQAVP-TWNYVAVHVYGNVELIND-QGEVMQSLHDMVEKYEAPGSRYQLSEVDAGMLSGMNKGIQAFKIIIKRIE 161 (202)
T ss_dssp GSSCSCCCC-EEEEEEEEEEEEEEECCC-HHHHHHHHHHHHHHHSCTTCCCCCC------CTHHHHSEEEEEEEEEEEE
T ss_pred hcccCCCCC-CcceEEEEEEEEEEEECC-HHHHHHHHHHHHHHhcCCCCCCccccCCHHHHHHHhCCeEEEEEEEeEEE
Confidence 1 011111 237899999999999976 457888899999987 653 345 22 257899999999874
No 36
>1dnl_A Pyridoxine 5'-phosphate oxidase; beta barrel, protein-FMN complex, oxidoreductase; HET: MSE FMN; 1.80A {Escherichia coli K12} SCOP: b.45.1.1 PDB: 1g79_A* 1g76_A* 1g78_A* 1g77_A* 1jnw_A* 1wv4_A*
Probab=99.30 E-value=2.3e-11 Score=99.36 Aligned_cols=121 Identities=17% Similarity=0.149 Sum_probs=91.2
Q ss_pred HHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCCCCCC
Q 047182 50 RWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGKRDPE 129 (207)
Q Consensus 50 r~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~~dp~ 129 (207)
..-+...+.++|||++. +|.|.+.+|.+.. .+.+| +||+....++|++||.+||+|+|++.....
T Consensus 25 ~~~~~~~~~~~LATv~~--dG~P~~R~v~~~~---~d~~g-l~F~T~~~S~K~~~L~~np~v~l~f~~~~~--------- 89 (199)
T 1dnl_A 25 EAKLADPTAMVVATVDE--HGQPYQRIVLLKH---YDEKG-MVFYTNLGSRKAHQIENNPRVSLLFPWHTL--------- 89 (199)
T ss_dssp HTTCSCTTEEEEEEECT--TSCEEEEEEECCE---EETTE-EEEEEETTSHHHHHHHHCCEEEEEECCGGG---------
T ss_pred HcCcCCCcEEEEEEECC--CCCEEEEEEEEEE---EcCCE-EEEEECCCCHHHHHHhhCCeEEEEEEcCCC---------
Confidence 34567889999999997 5999999999851 23445 999999999999999999999999987642
Q ss_pred CCccceEEEEEEEEEecCChHHHHHH------------------------------HHHHHHhCCCCCCCCCCCCeEEEE
Q 047182 130 DPVCAKITLTGKLVLVDVNSKAAEFA------------------------------RNALFAKHPEMKGWPKDHNFQTFK 179 (207)
Q Consensus 130 ~~~~~Rvtl~G~~~~v~~~~~e~~~a------------------------------~~~~~~rhP~~~~~~~~~df~~~r 179 (207)
...|.+.|+++.+++ ++.++. ...+.++||+. ....-+.|.+|+
T Consensus 90 ---~~qvri~G~a~~v~d--~~~~~~w~~~p~~s~~~aw~s~qs~~i~~r~~l~~~~~~~~~~~~~~-~~p~p~~~~~~~ 163 (199)
T 1dnl_A 90 ---ERQVMVIGKAERLST--LEVMKYFHSRPRDSQIGAWVSKQSSRISARGILESKFLELKQKFQQG-EVPLPSFWGGFR 163 (199)
T ss_dssp ---TEEEEEEEEEEECCH--HHHHHHHTTSCHHHHHHHHHCCTTSCCSCTHHHHHHHHHHHHHSTTS-SCCCCTTEEEEE
T ss_pred ---CEEEEEEEEEEEeCC--ccHHHHHHhCChhhhcccccCCCCcccCCHHHHHHHHHHHHhhccCC-CCCCCCceEEEE
Confidence 267999999999974 232211 11344556542 223336799999
Q ss_pred EEEeEEEEeccC
Q 047182 180 LEIDDIFLINWF 191 (207)
Q Consensus 180 l~~~~~~~V~GF 191 (207)
|+|+++.|..|=
T Consensus 164 v~p~~vefw~~~ 175 (199)
T 1dnl_A 164 VSLEQIEFWQGG 175 (199)
T ss_dssp ECCSEEEEEECC
T ss_pred EECCEEEEEecC
Confidence 999999988763
No 37
>1ci0_A Protein (PNP oxidase); B6 metabolism, structural genomics, PSI, protein structure initiative; HET: FMN; 2.70A {Saccharomyces cerevisiae} SCOP: b.45.1.1
Probab=99.24 E-value=3.2e-10 Score=94.56 Aligned_cols=123 Identities=9% Similarity=0.034 Sum_probs=95.9
Q ss_pred HHhcCCeEEEEeec-CCCCCCeeEEEeccccCCCCCCCCcEEEEEeCC-CcchhhhccCCCeEEEEeeCCCCCCCCCCCC
Q 047182 52 LVSQNSWGVLSTIS-SGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTL-DPTASNALKDKRSSLAISEYPLGTCGKRDPE 129 (207)
Q Consensus 52 LL~~~~~~vLAT~s-~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~-s~h~~NL~~nprvSl~V~~~~~~~~~~~dp~ 129 (207)
.+...+.++|||++ + +|.|.+.+|-+.+ .+.+| ++|++... ++|++||.+||+|+|++.....
T Consensus 51 ~~~~~~~~~LATvd~~--dG~P~~R~V~lk~---~d~~g-~~F~Tn~~~S~K~~eL~~NP~val~f~~~~~--------- 115 (228)
T 1ci0_A 51 RETLPEAITFSSAELP--SGRVSSRILLFKE---LDHRG-FTIYSNWGTSRKAHDIATNPNAAIVFFWKDL--------- 115 (228)
T ss_dssp SCSCTTEEEEEEEETT--TTEEEEEEEECCE---ECSSS-EEEEEECSSSHHHHHHHHCCEEEEEEEETTT---------
T ss_pred CCCCCCEEEEEEeeCC--CCCeEEEEEEEEE---ECCCE-EEEEeCCCCCcchHHHhhCCeEEEEEEeCCC---------
Confidence 45678899999999 7 5999999998851 24455 99999999 9999999999999999998753
Q ss_pred CCccceEEEEEEEEEecCC----------------------------hHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEE
Q 047182 130 DPVCAKITLTGKLVLVDVN----------------------------SKAAEFARNALFAKHPEMKGWPKDHNFQTFKLE 181 (207)
Q Consensus 130 ~~~~~Rvtl~G~~~~v~~~----------------------------~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~ 181 (207)
...|.|.|+++.++++ .++.+.....+.++||+.+....-+.|..|+|+
T Consensus 116 ---~rqVrI~G~ae~v~~~~~~~yf~~rp~~s~i~awas~qs~~i~~r~~l~~~~~~~~~~f~~~~~~p~p~~w~g~rv~ 192 (228)
T 1ci0_A 116 ---QRQVRVEGITEHVNRETSERYFKTRPRGSKIGAWASRQSDVIKNREELDELTQKNTERFKDAEDIPCPDYWGGLRIV 192 (228)
T ss_dssp ---TEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHCCTTCEESCHHHHHHHHHHHHHHTTSCSSCCCCTTEEEEEEE
T ss_pred ---CEEEEEEEEEEEcCchhhHHHHHhCCHHHhhceeeCCCCcccCCHHHHHHHHHHHHHhhcCCCCCCCCCcEEEEEEE
Confidence 2579999999999521 123333345566778776544455789999999
Q ss_pred EeEEEEeccCC
Q 047182 182 IDDIFLINWFG 192 (207)
Q Consensus 182 ~~~~~~V~GFG 192 (207)
|+.+-|..|=+
T Consensus 193 P~~iEfWq~~~ 203 (228)
T 1ci0_A 193 PLEIEFWQGRP 203 (228)
T ss_dssp EEEEEEEECCT
T ss_pred ccEEEEeeCCC
Confidence 99999988643
No 38
>1nrg_A Pyridoxine 5'-phosphate oxidase; PLP, FMN, oxidoreductase; HET: FMN PLP; 1.95A {Homo sapiens} SCOP: b.45.1.1 PDB: 3hy8_A*
Probab=99.16 E-value=5.4e-10 Score=94.93 Aligned_cols=120 Identities=14% Similarity=0.123 Sum_probs=91.8
Q ss_pred HhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCCCCCCCCc
Q 047182 53 VSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGKRDPEDPV 132 (207)
Q Consensus 53 L~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~~dp~~~~ 132 (207)
+...+.++|||++. +|.|.+.+|-+.+ .+.+| ++|+....++|++||.+||+|+|++...+.
T Consensus 75 l~e~~~~~LATvd~--dG~P~~R~V~lk~---~d~~g-l~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~------------ 136 (261)
T 1nrg_A 75 IGEANAMCLATCTR--DGKPSARMLLLKG---FGKDG-FRFFTNFESRKGKELDSNPFASLVFYWEPL------------ 136 (261)
T ss_dssp CSCTTEEEEEEECT--TSCEEEEEEECCC---EETTE-EEEEEETTSHHHHHHHHSCEEEEEEEEGGG------------
T ss_pred CCCCcEEEEEEECC--CCCeeEEEEEEEE---EcCCE-EEEEECCCChhHHHHhhCCeEEEEEEeCCC------------
Confidence 55688999999997 5999999998851 24455 999999999999999999999999988753
Q ss_pred cceEEEEEEEEEecCChHHHHHH------------------------------HHHHHHhCCCCCCCCCCCCeEEEEEEE
Q 047182 133 CAKITLTGKLVLVDVNSKAAEFA------------------------------RNALFAKHPEMKGWPKDHNFQTFKLEI 182 (207)
Q Consensus 133 ~~Rvtl~G~~~~v~~~~~e~~~a------------------------------~~~~~~rhP~~~~~~~~~df~~~rl~~ 182 (207)
...|.|.|+++.++++ +.++. ...+.++||+.. ...-+.|..|+|+|
T Consensus 137 ~rqVrI~G~ae~v~d~--e~~~~w~srp~~s~i~awas~Qs~~i~~r~~l~~~~~~~~~~f~~~~-vp~p~~w~g~rv~P 213 (261)
T 1nrg_A 137 NRQVRVEGPVKKLPEE--EAECYFHSRPKSSQIGAVVSHQSSVIPDREYLRKKNEELEQLYQDQE-VPKPKSWGGYVLYP 213 (261)
T ss_dssp TEEEEEEEEEEECCHH--HHHHHHHHSCHHHHHHHHHCCTTSCCSCHHHHHHHHHHHHHHTTTSC-CCCCTTEEEEEECC
T ss_pred CEEEEEEEEEEEecCc--chHHHHhcCChhhhhhhhcCCCCCccCCHHHHHHHHHHHHhhcccCC-CCCCCcEEEEEEEc
Confidence 2679999999999753 32221 112455666542 23336899999999
Q ss_pred eEEEEeccCCC
Q 047182 183 DDIFLINWFGG 193 (207)
Q Consensus 183 ~~~~~V~GFG~ 193 (207)
+++.|.+|-..
T Consensus 214 ~~vEfwq~~~~ 224 (261)
T 1nrg_A 214 QVMEFWQGQTN 224 (261)
T ss_dssp SEEEEEECCTT
T ss_pred cEEEEEECCCC
Confidence 99999987654
No 39
>1ty9_A Phenazine biosynthesis protein PHZG; chorismate, oxidoreductase; HET: FMN; 1.80A {Pseudomonas fluorescens} SCOP: b.45.1.1 PDB: 1t9m_A*
Probab=99.15 E-value=5.5e-10 Score=92.80 Aligned_cols=119 Identities=18% Similarity=0.207 Sum_probs=88.5
Q ss_pred HHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCCCCCC
Q 047182 50 RWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGKRDPE 129 (207)
Q Consensus 50 r~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~~dp~ 129 (207)
..-+...+.++|||++. +|.|.+.+|.+.+ .+.+| ++|+....++|++||.+||+|+|++.....
T Consensus 50 ~~~~~~~~~~~LATvd~--dG~P~~R~v~l~~---~d~~g-l~F~T~~~S~K~~eL~~nP~val~f~~~~~--------- 114 (222)
T 1ty9_A 50 RVGIREPRALALATADS--QGRPSTRIVVISE---ISDAG-VVFSTHAGSQKGRELLHNPWASGVLYWRET--------- 114 (222)
T ss_dssp HHTCSSTTEEEEEEECT--TCCEEEEEEECCE---ECSSE-EEEEEETTSHHHHHHHHCCEEEEEEEETTT---------
T ss_pred HhccCCCCEEEEEEECC--CCCEEEEEEEEEE---EcCCE-EEEEECCCCcchHHHhhCCeEEEEEEcCCC---------
Confidence 34566789999999998 5999999998851 23444 999999999999999999999999988753
Q ss_pred CCccceEEEEEEEEEecCChHHHHHHHHHHHHhCC---------------------------CC----CCCCCCCCeEEE
Q 047182 130 DPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHP---------------------------EM----KGWPKDHNFQTF 178 (207)
Q Consensus 130 ~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP---------------------------~~----~~~~~~~df~~~ 178 (207)
...|.+.|+++.+++ ++.++ |+..-| .. .....-+.|..|
T Consensus 115 ---~rqvrI~G~ae~v~~--~~~~~----~w~~rp~~s~i~A~as~qs~~~~~~~~l~~~~~~~~~~~~~~p~p~~w~~~ 185 (222)
T 1ty9_A 115 ---SQQIILNGQAVRLPN--AKADD----AWLKRPYATHPMSSVSRQSEELQDVQAMRNAARQLAELQGPLPRPEGYCVF 185 (222)
T ss_dssp ---TEEEEEEEEEEECCH--HHHHH----HHHTSCGGGHHHHHHCCTTSBCCCHHHHHHHHHHHHTSCSCCCCCTTEEEE
T ss_pred ---CeEEEEEEEEEEEcc--HHhHH----HHHhCccccccceeeccCCCcCCChHHHHHHHHHHhhccCCCCCCCCEEEE
Confidence 257999999999973 23222 222211 10 112234689999
Q ss_pred EEEEeEEEEeccCC
Q 047182 179 KLEIDDIFLINWFG 192 (207)
Q Consensus 179 rl~~~~~~~V~GFG 192 (207)
+|+|+++.|..|-.
T Consensus 186 rv~P~~vEfwq~~~ 199 (222)
T 1ty9_A 186 ELRLESLEFWGNGQ 199 (222)
T ss_dssp EEEEEEEEEEEEEE
T ss_pred EEEeeEEEEEECCC
Confidence 99999999988654
No 40
>2ou5_A Pyridoxamine 5'-phosphate oxidase-related, FMN-BI; split barrel-like fold, structural genomics, joint center FO structural genomics, JCSG; HET: MSE FMN; 1.60A {Jannaschia SP}
Probab=99.14 E-value=2.5e-10 Score=91.45 Aligned_cols=119 Identities=12% Similarity=0.117 Sum_probs=85.2
Q ss_pred CCeEEEEeecCCCCCCeeEEEeccccCCCCC-CCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCCCCCCCCccc
Q 047182 56 NSWGVLSTISSGLGGAPFGNVVSFSDGLPNE-GSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGKRDPEDPVCA 134 (207)
Q Consensus 56 ~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~-~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~~dp~~~~~~ 134 (207)
++.++|||++. +| |.+-+|.+.+ .+ .++.++|+....+.|.+||.+||+|+|++...+. ..
T Consensus 29 ~~~~~LATv~~--dG-P~~R~v~~~~---~~~~~~~l~F~T~~~s~K~~~l~~nP~v~l~f~~~~~------------~~ 90 (175)
T 2ou5_A 29 ARHPTLATIGT--DG-PDLRTLVLRA---ASHAEATLEFHTDAASPKVAHIRRDARVAIHIWIPKA------------SL 90 (175)
T ss_dssp GGSCEEEEEET--TE-EEEEECCCCE---EETTTTEEEEEEETTSHHHHHHHHCCEEEEEEEEGGG------------TE
T ss_pred cceEEEEEeCC--CC-CceeEEEEEE---EEcCCCEEEEEECCCChHHHHHhhCCcEEEEEEeCCC------------CE
Confidence 48999999998 59 9998887751 23 3478999999999999999999999999987753 25
Q ss_pred eEEEEEEEEEecCChHHHHHH----HHHHHHhCCCCCCC-----CCCCCeEEEEEEEeEEEEeccCCC
Q 047182 135 KITLTGKLVLVDVNSKAAEFA----RNALFAKHPEMKGW-----PKDHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 135 Rvtl~G~~~~v~~~~~e~~~a----~~~~~~rhP~~~~~-----~~~~df~~~rl~~~~~~~V~GFG~ 193 (207)
.+.+.|+++.++++++-+... +..|....|. ... ..-++|.+|+|+|+++.|.+|=+.
T Consensus 91 qvri~G~a~~~~d~~~~w~~~~~~~~~~~~~~~~~-~~~~~~l~~~p~~~~~~~v~p~~vefw~~~~~ 157 (175)
T 2ou5_A 91 QVRAKAIAKILPGDPNLFAQLPEAARMNYQGPVPG-TPLPAEPDATPNRFTRLICHLSEIDVLHLTTP 157 (175)
T ss_dssp EEEEEEEEEEEECCHHHHHHSCHHHHGGGSSSCTT-CBSSCCCCCCSCCEEEEEEEEEEEEEEECCSS
T ss_pred EEEEEEEEEEeCcHHHHHHHCCHhHHhcccCCCCC-CccccccCCCCCcEEEEEEEeeEEEEEeCCCC
Confidence 688999999998752222221 0111111121 111 123689999999999999986554
No 41
>2a2j_A Pyridoxamine 5'-phosphate oxidase; beta barrel, structural genomics, mycobacterium tuberculosis structural proteomics project, XMTB; HET: CME; 2.50A {Mycobacterium tuberculosis} SCOP: b.45.1.1
Probab=99.09 E-value=1.1e-09 Score=92.36 Aligned_cols=121 Identities=14% Similarity=0.153 Sum_probs=92.1
Q ss_pred HhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCCCCCCCCCc
Q 047182 53 VSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCGKRDPEDPV 132 (207)
Q Consensus 53 L~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~~~dp~~~~ 132 (207)
+...+.++|||++ + |.|.+-+|-+.+ .+.+| ++|++...+.|+++|.+||+|+|++.....
T Consensus 77 ~~e~~~~~LATvd-d--G~P~~R~Vllk~---~d~~g-l~F~Tn~~S~K~~eL~~NP~vaL~f~~~~~------------ 137 (246)
T 2a2j_A 77 VSEPNAMVLATVA-D--GKPVTRSVLCKI---LDESG-VAFFTSYTSAKGEQLAVTPYASATFPWYQL------------ 137 (246)
T ss_dssp CSSTTEEEEEEEE-T--TEEEEEEEEEEE---EETTE-EEEEEETTSHHHHHHHHSCEEEEEEEEGGG------------
T ss_pred CCCCceEEEEEcC-C--CceEEEEEEEEE---EcCCE-EEEEEcCCChhhHHHhhCCeEEEEEEeCCC------------
Confidence 3467899999999 4 999999998751 24445 999999999999999999999999998753
Q ss_pred cceEEEEEEEEEecCC----------------------------hHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeE
Q 047182 133 CAKITLTGKLVLVDVN----------------------------SKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDD 184 (207)
Q Consensus 133 ~~Rvtl~G~~~~v~~~----------------------------~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~ 184 (207)
...|.|.|+++.++++ .++.+...+.+.++||+.+....-+.|..|+|+|++
T Consensus 138 ~rqVrI~G~ae~v~~~es~~yf~srp~~sqi~awas~QS~~i~~r~~L~~~~~~~~~~f~~~~~vp~pp~w~g~rv~P~~ 217 (246)
T 2a2j_A 138 GRQAHVQGPVSKVSTEEIFTYWSMRPRGAQLGAWASQQSRPVGSRAQLDNQLAEVTRRFADQDQIPVPPGWGGYRIAPEI 217 (246)
T ss_dssp TEEEEEEEEEEECCHHHHHHHHHHSCHHHHHHHHHSCTTCCCCCSHHHHHHHHHHHHHHTTCSSCCCCTTEEEEEECCSE
T ss_pred CEEEEEEEEEEEeccHhHHHHHHhCCHhhhceEEeCCCCcccCCHHHHHHHHHHHHHhcccCCCCCCCCcEEEEEEEcCE
Confidence 2579999999999531 112222334555667654344455789999999999
Q ss_pred EEEeccCC
Q 047182 185 IFLINWFG 192 (207)
Q Consensus 185 ~~~V~GFG 192 (207)
+.|..|=+
T Consensus 218 iEfWqg~~ 225 (246)
T 2a2j_A 218 VEFWQGRE 225 (246)
T ss_dssp EEEEECCT
T ss_pred EEEccCCC
Confidence 99988643
No 42
>2i51_A Uncharacterized conserved protein of COG5135; pyridoxamine 5'-phosphate oxidase-related protein, structura genomics; HET: MSE FMN; 1.40A {Nostoc punctiforme}
Probab=99.09 E-value=7.6e-09 Score=84.05 Aligned_cols=138 Identities=16% Similarity=0.098 Sum_probs=94.4
Q ss_pred CCCchHHHHHHHHH-Hhc--CCeEEEEeecCCCCCCeeEEEeccccCCCCCCC-CcEEEEEeCCCcchhhhccCCCeEEE
Q 047182 39 KPHPNDAAAYARWL-VSQ--NSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTLDPTASNALKDKRSSLA 114 (207)
Q Consensus 39 ~~~~~~~~~~ar~L-L~~--~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~-g~~y~~~s~~s~h~~NL~~nprvSl~ 114 (207)
.|++..-.++|..- +.. .+.++|||++. +|.|.+.+|-+.+ .+.+ +.++|+....+.|++||.+||+|+|+
T Consensus 4 ~~~w~~wl~~a~~~~~~~p~~~~~~LATv~~--dG~P~~R~v~~~~---~d~~~~~l~F~T~~~S~K~~~l~~np~v~l~ 78 (195)
T 2i51_A 4 LAPWRGAIAHALHRNRSLVYARYLQLATVQP--NGRPANRTLVFRG---FLEDTNQLRFITDTRSAKADQIQQQPWAEIC 78 (195)
T ss_dssp CCTTHHHHHHHHHHTTTCGGGGEEEEEEECT--TSCEEEEEEECCC---BCTTSSCEEEEEETTSHHHHHHHHCCEEEEE
T ss_pred hhHHHHHHHHHHHhCCCCCCCCEEEEEEECC--CCCeeEEEEEEEE---EcCCCCeEEEEEcCCccHHHHHhhCCeEEEE
Confidence 35555555555432 222 45899999998 5999999998751 2333 47999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCCccceEEEEEEEEEecCChHH--HHHHHHHHHHhCC------------C--------------C
Q 047182 115 ISEYPLGTCGKRDPEDPVCAKITLTGKLVLVDVNSKA--AEFARNALFAKHP------------E--------------M 166 (207)
Q Consensus 115 V~~~~~~~~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e--~~~a~~~~~~rhP------------~--------------~ 166 (207)
+..... ...|.|.|+++.++++..+ ++..+..+....| . .
T Consensus 79 f~~~~~------------~~qvri~G~a~~v~~~~~~~~~~~~r~~~w~~~~~~sr~~~~~~spg~~~~~~~~~~~~~~~ 146 (195)
T 2i51_A 79 WYFPNT------------REQFRMAGDLTLISSDDSHQDLQPARIAMWQELSDAARLQFGWPYPGKPRIKESGAFEPSPP 146 (195)
T ss_dssp EEETTT------------TEEEEEEEEEEEECSSSTTGGGHHHHHHHHHHSCHHHHHGGGSCCTTSBCCCCGGGGCCCCC
T ss_pred EEeCCC------------CEEEEEEEEEEEEChHHhhhhhHHHHHHHHHhCChhhhhhcccCCCCCCccchhHHhhhhcc
Confidence 987753 2579999999999865321 1112222222221 0 0
Q ss_pred CCCCCCCCeEEEEEEEeEEEEeccCCC
Q 047182 167 KGWPKDHNFQTFKLEIDDIFLINWFGG 193 (207)
Q Consensus 167 ~~~~~~~df~~~rl~~~~~~~V~GFG~ 193 (207)
.....-+.|..|+|.|+++.+..|-..
T Consensus 147 ~~~p~p~~w~~~~v~P~~iefwq~~~~ 173 (195)
T 2i51_A 147 DPIEPVPNFCLLLLDPVQVDHLELRGE 173 (195)
T ss_dssp CSSSCCTTEEEEEEEEEEEEEEESSSS
T ss_pred CCCCCCCceEEEEEEccEEEEEecCCC
Confidence 011123689999999999999887544
No 43
>3in6_A FMN-binding protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, flavoprotein; HET: FMN; 2.12A {Syntrophomonas wolfei subsp}
Probab=98.72 E-value=1.8e-07 Score=72.77 Aligned_cols=126 Identities=14% Similarity=-0.020 Sum_probs=85.5
Q ss_pred HHHHHHHHHHhc-CCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCC
Q 047182 44 DAAAYARWLVSQ-NSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGT 122 (207)
Q Consensus 44 ~~~~~ar~LL~~-~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~ 122 (207)
+..+.+|+|++. .-.|+|||.+. +|.|.++++..+. .-+++++.|.-.......+||++||+|++++...+.
T Consensus 17 ~~~~~~r~l~~~~v~~~~LATAdk--dG~PNVa~~~~~~---~~Dd~tI~iad~f~~kT~~NL~eNP~aav~~~~~~~-- 89 (148)
T 3in6_A 17 ELLEKARSLINANYISTTLSTVDR--NYEVNIAVISVLE---MIGDDTIICARFGADKTYANLKETGKGVFMVLLTDN-- 89 (148)
T ss_dssp HHHHHHHHHHHHTCSSEEEEEECT--TCCEEEEECCCEE---EETTTEEEEEESSCHHHHHHHHHHCEEEEEEEEESS--
T ss_pred HHHHHHHHHHhCCcceEEEEEcCC--CCCccEEEEeeeE---EecCCEEEEEeccchhHHHHHHhCCcEEEEEEEcCC--
Confidence 345678999987 68999999998 6999999998441 123465555556677889999999999999984432
Q ss_pred CCCCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEEe
Q 047182 123 CGKRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFLI 188 (207)
Q Consensus 123 ~~~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~V 188 (207)
+. ..+...+.++..++..+.+.++..++.+...- ..-.+... +..+++++++-|
T Consensus 90 -----~~--~~KG~Rl~l~~~e~~t~G~~fe~mk~~l~~~~---~~~fp~K~--~~V~kI~~I~pv 143 (148)
T 3in6_A 90 -----DK--SKDGIRVYVELSADLQEGEYFDRIKKRLDNTT---YKNFPLKN--CLVFKIVKILPV 143 (148)
T ss_dssp -----SC--EEEEEEEEEEEEEEESSSHHHHHHHHHHHTSG---GGGSCCCE--EEEEEEEEEECS
T ss_pred -----CC--ccceEEEEEEEEEEecCcHhHHHHHHHHhhhc---ccCCCcce--eEEEEEEEEEeh
Confidence 11 24566666677777776778888777665521 11112233 334666666644
No 44
>3a6r_A FMN-binding protein; electron transport, flavoprotein; HET: FMN; 1.20A {Desulfovibrio vulgaris} PDB: 1axj_A* 1flm_A* 3awh_A* 3amf_A* 3a6q_A* 1wll_A* 3a20_A* 1wli_A* 1wlk_A* 2e83_A*
Probab=98.56 E-value=5.6e-07 Score=68.02 Aligned_cols=115 Identities=10% Similarity=0.031 Sum_probs=85.7
Q ss_pred HHHHHHHhcCCeEEEEeecCCCCCCeeEEE--eccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCCCCCC
Q 047182 47 AYARWLVSQNSWGVLSTISSGLGGAPFGNV--VSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPLGTCG 124 (207)
Q Consensus 47 ~~ar~LL~~~~~~vLAT~s~~~~G~P~~S~--v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~~~~~ 124 (207)
++..++|+......|||.+ + |.|+..+ ..|. ...+|.++++....+.++.+||++||++++++..++.. +
T Consensus 4 e~~~e~l~~~~~~~iaT~~-~--g~Pnvvptw~~~~---~v~dD~~ili~~~~~~kT~~Nl~~N~kvai~v~~~e~~--g 75 (122)
T 3a6r_A 4 GTFFEVLKNQGVVAIATQG-E--DGPHLVNTWNSYL---KVLDGNRIVVPVGGMHKTEANVARDERVLMTLGSRKVA--G 75 (122)
T ss_dssp HHHHHHTTSCCEEEEEEEC-S--SSEEEEEEEGGGC---EEETTTEEEEEESSCHHHHHHHHHCCEEEEEEEEEEEE--C
T ss_pred HHHHHHHhcCCeEEEEEcC-C--CCCcEEeeeceEE---EEecCCEEEEEccccHHHHHHHhhCCeEEEEEEecccc--c
Confidence 4567788878888999998 3 9999877 7777 13356789999999999999999999999999877520 0
Q ss_pred CCCCCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCCCCeEEEEEEEeEEEE
Q 047182 125 KRDPEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKDHNFQTFKLEIDDIFL 187 (207)
Q Consensus 125 ~~dp~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~~df~~~rl~~~~~~~ 187 (207)
... .....++.|+++.+.++ ++++.. +++|. --....|+|++++-
T Consensus 76 ~~g----~~~gf~ikGta~~~~~G-~~fd~~-----~k~~~--------~k~vlvi~i~~i~q 120 (122)
T 3a6r_A 76 RNG----PGTGFLIRGSAAFRTDG-PEFEAI-----ARFKW--------ARAALVITVVSAEQ 120 (122)
T ss_dssp SSS----EEEEEEEEEEEEEESSS-HHHHTT-----TTSTT--------CSEEEEEEEEEEEE
T ss_pred ccC----CCceEEEEEEEEEEecc-HHHHHH-----hccCc--------ccEEEEEEEEEEEE
Confidence 111 33679999999999874 455544 23322 33677899998874
No 45
>3r5l_A Deazaflavin-dependent nitroreductase; PA-824, split barrel-like fold, DUF385, deazaflavin-dependen nitroreductase, nitroimidazoles; HET: MES; 1.55A {Mycobacterium tuberculosis} PDB: 3r5p_A 3r5w_A* 3r5r_A*
Probab=98.34 E-value=3e-06 Score=64.02 Aligned_cols=102 Identities=13% Similarity=0.029 Sum_probs=75.5
Q ss_pred cCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCC-----CcchhhhccCCCeEEEEeeCCCCCCCCCCCC
Q 047182 55 QNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTL-----DPTASNALKDKRSSLAISEYPLGTCGKRDPE 129 (207)
Q Consensus 55 ~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~-----s~h~~NL~~nprvSl~V~~~~~~~~~~~dp~ 129 (207)
......|.|.+.+ +|.|+.+++.|+ .+ ++.+++..|.- ...++||++||+|+|.+...
T Consensus 14 g~p~~~Ltt~GRk-SG~pr~tPv~~~----~~-g~~~~vvas~~G~~~~p~W~~Nl~A~P~v~v~~~~~----------- 76 (122)
T 3r5l_A 14 KIPVALLTTTGRK-TGQPRVNPLYFL----RD-GGRVIVAASKGGAEKNPMWYLNLKANPKVQVQIKKE----------- 76 (122)
T ss_dssp SCCCEEEEEECTT-TCSEEEEEEEEE----EE-TTEEEEECSCCGGGCSCHHHHHHHHCCEEEEEETTE-----------
T ss_pred CCcEEEEEEcCCC-CCCEEEEEEEEE----EE-CCEEEEEEecCCCCCCCHHHHhhccCCcEEEEECCE-----------
Confidence 4578899999987 899999999998 33 45566655642 35699999999999987211
Q ss_pred CCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCCC--CCeEEEEEEE
Q 047182 130 DPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPKD--HNFQTFKLEI 182 (207)
Q Consensus 130 ~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~~--~df~~~rl~~ 182 (207)
+..+++++++ ++|.+++...+.+++|.-..|-.. -.+-++.|+|
T Consensus 77 -------~~~~~A~~l~--~~Er~~~~~~~~~~~p~y~~yq~~t~R~ipv~~L~p 122 (122)
T 3r5l_A 77 -------VLDLTARDAT--DEERAEYWPQLVTMYPSYQDYQSWTDRTIPIVVCEP 122 (122)
T ss_dssp -------EEEEEEEECC--HHHHHHHHHHHHHHCTTCCCTTGGGCTTSCEEEEEC
T ss_pred -------EEEEEEEECC--cchHHHHHHHHHHHCcCHHHHHhhcCCcccEEEEeC
Confidence 3567788886 568899999999999986666542 3445555543
No 46
>3r5z_A Putative uncharacterized protein; split barrel-like fold, DUF385, deazaflavin-dependent reduct F420-dependent reductase, FDR; HET: F42; 1.50A {Nocardia farcinica}
Probab=97.84 E-value=4.1e-05 Score=59.38 Aligned_cols=100 Identities=12% Similarity=-0.034 Sum_probs=73.9
Q ss_pred CeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCC-----CcchhhhccCCCeEEEEeeCCCCCCCCCCCCCC
Q 047182 57 SWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTL-----DPTASNALKDKRSSLAISEYPLGTCGKRDPEDP 131 (207)
Q Consensus 57 ~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~-----s~h~~NL~~nprvSl~V~~~~~~~~~~~dp~~~ 131 (207)
....|-|.+.+ .|.|+.+++.|. ..+|..|+..|.- ...++||++||+|.+.+...
T Consensus 38 p~~lLtt~GRk-SG~~r~tPl~~~-----~~~~~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g~~------------- 98 (145)
T 3r5z_A 38 PVVVLTTKGAK-TGKLRKTPLMRV-----EHNGEYAVVASLGGAPKHPVWYHNIKAEPHVELRDGTE------------- 98 (145)
T ss_dssp EEEEEEEECTT-TCCEEEEEEECE-----EETTEEEEECCBTTBSSCCHHHHHHHHCCEEEEEETTE-------------
T ss_pred eEEEEEEcCCC-CCCEEEEEEEEE-----EECCEEEEEEcCCCCCCCChHHHHhhhCCcEEEEECCE-------------
Confidence 46789999987 899999999998 3456677777764 25699999999998876221
Q ss_pred ccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCC--CCCeEEEEEEE
Q 047182 132 VCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPK--DHNFQTFKLEI 182 (207)
Q Consensus 132 ~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~--~~df~~~rl~~ 182 (207)
+..+++++++ ++|.+++...+.+++|.-..|-. .-..-+|+|+|
T Consensus 99 -----~~~~~Ar~~~--~~Er~~~w~~~~~~~p~y~~Yq~~t~R~iPv~~L~p 144 (145)
T 3r5z_A 99 -----VGDYTAREVT--GEEKRVWWERAVEVWPDYAEYQTKTTREIPVFVLTP 144 (145)
T ss_dssp -----EEEEEEEECC--HHHHHHHHHHHHHHCTHHHHHGGGCSSCCCEEEEEE
T ss_pred -----EEEEEEEECC--chHHHHHHHHHHHHCcCHHHHHHhcCCcCceEEEEe
Confidence 3556677786 46888999999999987444332 13556677765
No 47
>3r5y_A Putative uncharacterized protein; PA-824, nitroimidazoles, split barrel-like fold, DUF385, DEA dependent nitroreductase, unknown function; HET: F42; 1.80A {Nocardia farcinica}
Probab=97.80 E-value=9e-05 Score=57.55 Aligned_cols=100 Identities=15% Similarity=0.027 Sum_probs=72.7
Q ss_pred CeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCC-----CcchhhhccCCCeEEEEeeCCCCCCCCCCCCCC
Q 047182 57 SWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTL-----DPTASNALKDKRSSLAISEYPLGTCGKRDPEDP 131 (207)
Q Consensus 57 ~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~-----s~h~~NL~~nprvSl~V~~~~~~~~~~~dp~~~ 131 (207)
....|-|.+.+ +|.|+.+++.|. ..+|..|+..|.- ...++||++||+|.+.+...
T Consensus 40 p~~lLtt~GRk-SG~~r~tPl~~~-----~~~g~~~vVas~gG~~~~p~W~~Nl~A~p~v~v~~g~~------------- 100 (147)
T 3r5y_A 40 PLVILTTVGRK-TGALRKTPVMRV-----EHDGRYAVVASQGGAPTHPAWYFNLVADPRAQLRDKDA------------- 100 (147)
T ss_dssp EEEEEEEECTT-TCCEEEEEEECC-----EETTEEEEECCGGGCSSCCHHHHHHHHCCEEEEEETTE-------------
T ss_pred cEEEEEEcCCC-CCCEEEEEEEEE-----EECCEEEEEEcCCCCCCCChHHHhhhhCCcEEEEECCE-------------
Confidence 46789999987 899999999998 4456777766653 36799999999998875211
Q ss_pred ccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCC--CCCeEEEEEEE
Q 047182 132 VCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPK--DHNFQTFKLEI 182 (207)
Q Consensus 132 ~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~--~~df~~~rl~~ 182 (207)
++.+++++++ ++|.+++...+.+++|.-..|-. .-.+-++.|+|
T Consensus 101 -----~~~~~Ar~~~--~~Er~~~w~~~~~~~P~y~~Yq~~t~R~IPv~~L~p 146 (147)
T 3r5y_A 101 -----VLSVVARELA--GPERAEWWERAVRAYPTYQEYQDNTRRLIPVLLLEP 146 (147)
T ss_dssp -----EEEEEEEECC--HHHHHHHHHHHHHHCTHHHHHHHTCSSCCCEEEEEE
T ss_pred -----EEEEEEEECC--chHHHHHHHHHHHHCCCHHHHHhhcCCcCcEEEEeC
Confidence 3567788887 46888999999999987433322 12445566654
No 48
>3h96_A F420-H2 dependent reductase A; pnpox, flavin, aflatoxin, flavoprotein; 2.00A {Mycobacterium smegmatis str}
Probab=97.78 E-value=0.0001 Score=56.94 Aligned_cols=103 Identities=9% Similarity=0.090 Sum_probs=75.5
Q ss_pred cCCeEEEEeecCCCCCCeeEEEeccccCCCCCCC--CcEEEEEeC-----CCcchhhhccCCCeEEEEeeCCCCCCCCCC
Q 047182 55 QNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGS--GVPYFYLTT-----LDPTASNALKDKRSSLAISEYPLGTCGKRD 127 (207)
Q Consensus 55 ~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~--g~~y~~~s~-----~s~h~~NL~~nprvSl~V~~~~~~~~~~~d 127 (207)
-.....|-|.+.+ +|.|+.+++.|. .+++ +.+++..|. ....++||++||+|.+.+...
T Consensus 29 g~~~llLtt~GRk-SG~~r~tPl~~~----~~g~~~~~~~vvas~gG~~~~p~W~~Nl~A~p~v~v~~g~~--------- 94 (143)
T 3h96_A 29 GAPMVLVHHVGRK-TGKAAVTPMMYL----PSDDDPGTIYVFASKAGAASNPAWYYNLTTAGTAQVEVGTE--------- 94 (143)
T ss_dssp TSCEEEEEEECTT-TCCEEEEEEECE----ECSSCTTEEEEECCGGGCSSCCHHHHHHHHHSEEEEEETTE---------
T ss_pred CCcEEEEEEcCCC-CCCEEEEEEEEE----EecCcCCcEEEEEcCCCCCCCChHHHhhhhCCcEEEEECCE---------
Confidence 3577899999987 899999999998 3431 666666665 357799999999998876211
Q ss_pred CCCCccceEEEEEEEEEecCChHHHHHHHHHHHHhCCCCCCCCC-C---CCeEEEEEEE
Q 047182 128 PEDPVCAKITLTGKLVLVDVNSKAAEFARNALFAKHPEMKGWPK-D---HNFQTFKLEI 182 (207)
Q Consensus 128 p~~~~~~Rvtl~G~~~~v~~~~~e~~~a~~~~~~rhP~~~~~~~-~---~df~~~rl~~ 182 (207)
++.+++++++ ++|.+++...+.+++|.-..|-. . -..-+|+|+|
T Consensus 95 ---------~~~~~A~~~~--~~Er~~~~~~~~~~~P~y~~Yq~~t~~~R~iPv~~L~p 142 (143)
T 3h96_A 95 ---------TYAVGVTEVT--GEDRDRIYSEQARRYPGFADYEKKTAGIRTIPVLALTR 142 (143)
T ss_dssp ---------EEEEEEEEEC--HHHHHHHHHHHHHHCTHHHHHHHHTTTTCCCCEEEEEE
T ss_pred ---------EEEEEEEecC--chHHHHHHHHHHHHCcCHHHHHHhcCCCCcccEEEEee
Confidence 3567777887 46889999999999987443322 1 2556677765
No 49
>2ptf_A Uncharacterized protein MTH_863; structural genomics, unknown function, PSI-2, protein struct initiative; HET: FMN; 2.35A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.4
Probab=77.49 E-value=3.2 Score=33.92 Aligned_cols=55 Identities=15% Similarity=0.098 Sum_probs=42.1
Q ss_pred eEEEEeecCCCCCCeeEEEeccccCCCCCCCC-cEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 58 WGVLSTISSGLGGAPFGNVVSFSDGLPNEGSG-VPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 58 ~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g-~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
-.+++|.+. +|.+..++++|. ..++ .+.+.+...+..++||++.+.+.+-|..+.
T Consensus 37 e~vVtT~~~--dG~~NlAP~s~~-----~~~~~~~~i~i~~~k~T~~NI~~tgefVVNi~~d~ 92 (233)
T 2ptf_A 37 ETIVVTWDD--SMVGNAAPIGVL-----CTGDDTVTLYLYQGTRTVENVLNNGRFTVNVTLDP 92 (233)
T ss_dssp EEEEEEECT--TCCEEEEEEEEE-----ECSSSEEEEEEETTCHHHHHHHHHSEEEEEECCCH
T ss_pred EEEEEEeCC--CCCEeeccEEEE-----EcCCCCEEEEEcCCChHHHHHHhCCEEEEEECCHH
Confidence 455778887 699999999988 3344 455555566788999999999999998643
No 50
>2iml_A Hypothetical protein; FMN binding, PSI-2, structural genomics, protein structure initiative; HET: FMN; 1.65A {Archaeoglobus fulgidus} SCOP: b.45.1.4
Probab=62.77 E-value=9.1 Score=30.39 Aligned_cols=55 Identities=11% Similarity=-0.089 Sum_probs=39.7
Q ss_pred eEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEE-eCCCcchhhhccCCCeEEEEeeC
Q 047182 58 WGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYL-TTLDPTASNALKDKRSSLAISEY 118 (207)
Q Consensus 58 ~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~-s~~s~h~~NL~~nprvSl~V~~~ 118 (207)
...++|.++ +|.+...+++|. ...+..+.+.+ .+.+..++||++.+.+.+-|..+
T Consensus 16 ev~VtT~~~--~G~~N~AP~s~~----~~~~~~~~v~~~~~~k~T~~NI~~~gefVvNi~~d 71 (199)
T 2iml_A 16 EIIAITENE--DGSWNAAPIGII----VEDSSSDTAKAKLYRNRTRANLERSGVLFANVTDD 71 (199)
T ss_dssp EEEEEEECT--TSCEEEEEEEEE----ESCTTSSEEEEECCSSHHHHHHHHHCEEEEEECCC
T ss_pred EEEEEEcCC--CCCEEeccEEEE----EcCCCCEEEEEcCCCChHHHHHHHCCEEEEEECCH
Confidence 345777877 599999998887 22221355555 45568899999999999998754
No 51
>3e4v_A NADH:FMN oxidoreductase like protein; YP_544701.1, structural genomics, joint center for structural genom JCSG; HET: MSE FMN; 1.40A {Methylobacillus flagellatus KT}
Probab=61.88 E-value=11 Score=29.17 Aligned_cols=68 Identities=12% Similarity=0.018 Sum_probs=46.8
Q ss_pred HHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCC-cEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 48 YARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSG-VPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 48 ~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g-~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
.++.+|.-.-..+++|.+. +|.|.+.++++.- ....+- .+.+.+.+.+...+||+++.+.++-|-..+
T Consensus 10 ~~~~~l~p~pV~vVTt~~~--~g~~n~~t~s~~~--~vs~~PPlv~v~i~~~~~t~~~i~~~g~F~Vnvl~~~ 78 (186)
T 3e4v_A 10 NAYRILESGPIVLVSTRGA--DGRANLMTMGFHM--MMQHEPPLVGAIIGPWDYSHQALSETGECVLAVPTVD 78 (186)
T ss_dssp GGHHHHTTCCCEEEEEECT--TSCEEEEEECCEE--EEETTTTEEEEECCTTSTHHHHHHHHCEEEEEECCGG
T ss_pred HhccccCCCceEEEEEeCC--CCceEEEEhhhhh--hhcCCCCEEEEEEcChhHHHHHHHHCCeEEEEeCCHH
Confidence 4577887788899999776 5888877777640 011121 233444566677899999999999886554
No 52
>2nr4_A Conserved hypothetical protein; structural genomics, unknown function, flavoprotein, PSI-2, protein structure initiative; HET: FMN; 1.85A {Methanosarcina mazei} SCOP: b.45.1.4
Probab=59.79 E-value=9.5 Score=30.53 Aligned_cols=52 Identities=15% Similarity=0.137 Sum_probs=41.7
Q ss_pred EEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeC
Q 047182 59 GVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEY 118 (207)
Q Consensus 59 ~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~ 118 (207)
.++.|.+. + .|..+++... .. ++.+.+.+-+.+..++||++++.+.+-|..|
T Consensus 32 ~vI~Tt~~--~-~~N~APiG~~----~~-~~~v~i~~~~~s~T~eNI~~~~~fvvNv~~D 83 (213)
T 2nr4_A 32 EIIASTGF--E-HPNAAPIGIV----MK-GERPFVRLFKGSHTWENVLKEKCLASNVVYD 83 (213)
T ss_dssp EEEEEECS--S-SCEEEEEEEE----ES-SSSCEEEEETTSHHHHHHHHHCEEEEECCCC
T ss_pred EEEEEecC--C-CccccceEEE----Ee-CCEEEEEECCCCchHHHHhhCCEEEEEeCCC
Confidence 56777764 5 8888888877 33 4468888888999999999999999998764
No 53
>3b5m_A Uncharacterized protein; structural genomics, unknown function, flavoprotein, PSI-2, structure initiative; 1.21A {Rhodopirellula baltica}
Probab=44.39 E-value=24 Score=27.92 Aligned_cols=57 Identities=12% Similarity=0.069 Sum_probs=33.5
Q ss_pred EEEEeecCCCCCCeeEEEeccccCCCC--CCCCcEEE-EEeCCCcchhhhccCCCeEEEEeeC
Q 047182 59 GVLSTISSGLGGAPFGNVVSFSDGLPN--EGSGVPYF-YLTTLDPTASNALKDKRSSLAISEY 118 (207)
Q Consensus 59 ~vLAT~s~~~~G~P~~S~v~y~dg~~~--~~~g~~y~-~~s~~s~h~~NL~~nprvSl~V~~~ 118 (207)
.++.|.+. +|.+...++++.-.... ..+. +++ -+-+.+..++||++++...+-|..+
T Consensus 7 ~vVTT~~~--~G~~N~AP~g~~~~~~~Svs~~P-~v~v~i~~~s~T~~Ni~~~g~fvVNi~~~ 66 (205)
T 3b5m_A 7 SLVTTLDE--QGRINLAPLGPIVLPPQSPGGLP-QFLLRPYEGSTTCDNLLASGNAVIHVIDD 66 (205)
T ss_dssp EEEEEECT--TCCEEEEEECCEEECCSSTTCCC-EEEECCCTTSHHHHHHHHHCEEEEEECCC
T ss_pred EEEEEcCC--CCCEeecceEEEEeccccccCCC-cEEEEECCCCchHHHHHHCCEEEEEECCH
Confidence 56788886 47644444443300001 1223 443 3334567799999999999998753
No 54
>1eje_A FMN-binding protein; structural genomics, PSI, protein struc initiative; HET: FMN; 2.20A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: b.45.1.2
Probab=42.67 E-value=13 Score=28.87 Aligned_cols=68 Identities=16% Similarity=0.103 Sum_probs=45.4
Q ss_pred HHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 49 ARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 49 ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
.|++|.-..+.+++|.+. +|.|.+.++++.-.. ..+.-.+.+.+.+.+...+||+++.+.++-|-..+
T Consensus 20 ~~~~l~p~~V~vVTt~~~--~g~~n~~t~s~~~~v-s~~Pp~v~v~i~~~~~T~~~i~~~~~F~Vnvl~~~ 87 (192)
T 1eje_A 20 AHRILTPRPTVMVTTVDE--EGNINAAPFSFTMPV-SIDPPVVAFASAPDHHTARNIESTHEFVINITPAD 87 (192)
T ss_dssp GGGTSCCEECEEEEEECT--TCCEEEEEECSEEEE-ETTTTEEEEEECTTSHHHHHHHHHCEEEEEECBGG
T ss_pred heeeccCcceEEEEEECC--CCCeEEEEhhccchh-cCCCCEEEEEECCchHHHHHHHHCCcEEEEeCCHH
Confidence 355666556677888765 488888887765110 11112345566677788999999999999886653
No 55
>3bpk_A Nitrilotriacetate monooxygenase component B; structural genomics, APC25244, PSI-2, protein structure initiative; 1.56A {Bacillus cereus atcc 14579}
Probab=38.06 E-value=44 Score=26.04 Aligned_cols=71 Identities=13% Similarity=0.157 Sum_probs=44.1
Q ss_pred HHHHHHHHHh---cCCeEEEEeecCCCCCCeeEEEeccccCCCCCCC-CcEEEEEeCC----CcchhhhccCCCeEEEEe
Q 047182 45 AAAYARWLVS---QNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGS-GVPYFYLTTL----DPTASNALKDKRSSLAIS 116 (207)
Q Consensus 45 ~~~~ar~LL~---~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~-g~~y~~~s~~----s~h~~NL~~nprvSl~V~ 116 (207)
..+.-|.++. -...++++|.+. +|.|.+.++++.- + ...+ -.+.+.+.+. +...+||+++.+.++-|-
T Consensus 14 ~~~~~r~~~~~~~p~pV~vVtt~~~--~g~~n~~t~s~~~-~-vs~~Pp~v~v~i~~~~~~~~~T~~~i~~~~~F~Vnil 89 (206)
T 3bpk_A 14 EKDNYKLLTGSIIPRPVAFVTSVTK--EGVLNGAPYSYFN-I-VAANPPLISVSVQRKAGERKDTSRNAIEKGEFVVHIS 89 (206)
T ss_dssp HHHHHHHHHHHSCCEECEEEEEECT--TCCEEEEEESSEE-E-EETTTTEEEEEEECBTTBCCHHHHHHHHHSEEEEEEC
T ss_pred hhHhhHHhhCcccCcccEEEEEeCC--CCCEEEEEeeeee-c-ccCCCCEEEEEEcCCCCChhHHHHHHHHCCeEEEEeC
Confidence 3344444443 455677888765 5888888877651 0 1111 1233444554 677899999999999886
Q ss_pred eCC
Q 047182 117 EYP 119 (207)
Q Consensus 117 ~~~ 119 (207)
..+
T Consensus 90 ~~~ 92 (206)
T 3bpk_A 90 DES 92 (206)
T ss_dssp BTT
T ss_pred CHH
Confidence 654
No 56
>3fge_A Putative flavin reductase with split barrel domai; YP_750721.1; 1.74A {Shewanella frigidimarina ncimb 400}
Probab=31.67 E-value=44 Score=25.99 Aligned_cols=67 Identities=12% Similarity=0.068 Sum_probs=42.9
Q ss_pred HHHHHHhc----CCeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEE--EEeC---CCcchhhhccCCCeEEEEeeC
Q 047182 48 YARWLVSQ----NSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYF--YLTT---LDPTASNALKDKRSSLAISEY 118 (207)
Q Consensus 48 ~ar~LL~~----~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~--~~s~---~s~h~~NL~~nprvSl~V~~~ 118 (207)
..-+||.. ...++++|.+. +|.|.+.++++.- ....+- |.+ .+.+ .+...+||+++...++-|-..
T Consensus 16 ~~y~ll~~~~~P~pV~vVtt~~~--~G~~n~~t~s~~~--~vs~~P-Plv~v~i~~~~~~~~T~~~i~~~g~F~Vnvl~~ 90 (203)
T 3fge_A 16 TRAHFINSLSGFKSANLIGTQDR--QGNTNLSIVSSVI--HLGANP-PLMGMIIRPHSVPRHTFENIMQTGLYTINHVNQ 90 (203)
T ss_dssp HHHHHHHHTTCCEECEEEEEECT--TCCEEEEEESCCE--EEEETT-EEEEEEECC---CHHHHHHHHHHCEEEEEECBT
T ss_pred HHHHHHhcccCccccEEEEEeCC--CCceeEEEeeeee--hhcCCC-CEEEEEeCCCCCccHHHHHHHHCCcEEEEECCH
Confidence 34456655 55788899876 5888888877650 011111 333 3333 456689999999999988665
Q ss_pred C
Q 047182 119 P 119 (207)
Q Consensus 119 ~ 119 (207)
+
T Consensus 91 ~ 91 (203)
T 3fge_A 91 S 91 (203)
T ss_dssp T
T ss_pred H
Confidence 4
No 57
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=30.70 E-value=1.6e+02 Score=24.76 Aligned_cols=70 Identities=11% Similarity=0.087 Sum_probs=47.3
Q ss_pred HHHHHHHhcCCeE--EEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 47 AYARWLVSQNSWG--VLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 47 ~~ar~LL~~~~~~--vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
+.-|+.|..-..+ ++.|.+. +|.|.+.++++.-.. ..+.-.+.+.+.+.+...+||+++.+.++-|-..+
T Consensus 19 ~~fr~am~~~~~gV~vVTt~~~--~G~~ngmt~ss~~sv-S~~PPlv~v~i~~~s~T~~~i~~sg~F~VnvL~~~ 90 (321)
T 3rh7_A 19 RALRDAFGAFATGVTVVTASDA--AGKPIGFTANSFTSV-SLDPPLLLVCLAKSSRNYESMTSAGRFAINVLSET 90 (321)
T ss_dssp HHHHHHHTTSCEECEEEEEECT--TCCEEEEEECCEEEE-ETTTTEEEEEEETTCSSHHHHHHCSEEEEEECBTT
T ss_pred HHHHHHHHhCCCCeEEEEEEcC--CCCEEEEEecchhhh-cCCCCEEEEEECCcchHHHHHHhCCeEEEEECCHH
Confidence 3567777776665 5677665 488888777765110 11122355666777888999999999999886654
No 58
>1yoa_A Putative flavoprotein; HB8, FAD, structural genomics, riken structura genomics/proteomics initiative, RSGI, unknown function; HET: FAD FMN; 1.90A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1wgb_A*
Probab=29.94 E-value=83 Score=23.13 Aligned_cols=68 Identities=9% Similarity=-0.040 Sum_probs=44.4
Q ss_pred HHHHHHhcC--CeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 48 YARWLVSQN--SWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 48 ~ar~LL~~~--~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
.-|+.+..- .+.++.|.+ +|.|.+.++++.-.. ..+.-.+.+.+.+.+...+||+++.+.++-|-..+
T Consensus 5 ~~r~a~~~~~~~V~vVtt~~---~g~~n~~t~s~~~~v-s~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~ 74 (159)
T 1yoa_A 5 AKKKVLRSFTYGLYVLTAKD---GDEVAAGTVNWVTQA-SFQPPLVAVGLKRDSHLHALVERTGKLALMTLAHD 74 (159)
T ss_dssp HHHHHHTTCCCBCEEEEEEE---TTEEEEEEECCEEEE-ETTTTEEEEEEESSSHHHHHHHHHCEEEEEECBTT
T ss_pred HHHHHHHcCCCccEEEEEcc---CCEEEEEEEeeeeee-EcCCCEEEEEECCCCchHHHHHhCCeEEEEECchh
Confidence 345555543 445677754 478888777766110 11223455666777888999999999999997765
No 59
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=28.69 E-value=1.2e+02 Score=22.44 Aligned_cols=68 Identities=9% Similarity=-0.085 Sum_probs=45.1
Q ss_pred HHHHHHhcCC--eEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 48 YARWLVSQNS--WGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 48 ~ar~LL~~~~--~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
.-|+.|..-. ..++.|.+ +|.|.+.+++..-. ...+.-.+.+.+.+.+...+||+++.+.++.|-..+
T Consensus 6 ~fr~a~~~~p~~V~vVTt~~---~g~~~g~t~s~~~s-vs~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 75 (157)
T 3pft_A 6 SLREAFGHFPSGVIAIAAEV---DGTRVGLAASTFVP-VSLEPPLVAFAVQNSSTTWPKLKDLPSLGISVLGEA 75 (157)
T ss_dssp HHHHHHHTSCBCCEEEEEEE---TTEEEEEEESCCEE-EETTTTEEEEEEETTCSSHHHHTTSSCEEEEECBTT
T ss_pred HHHHHHHhCCCceEEEEEee---CCEEEEEEeeeEeE-EECCCcEEEEEECCCCchHHHHHhCCEEEEEECCHH
Confidence 3455555533 45677765 48888888876511 011223455667788899999999999999986654
No 60
>1rz1_A Phenol 2-hydroxylase component B; flavin, NAD, oxidoreductase; HET: FAD NAD; 2.10A {Geobacillus thermoglucosidasius} SCOP: b.45.1.2 PDB: 1rz0_A*
Probab=27.15 E-value=76 Score=23.49 Aligned_cols=68 Identities=12% Similarity=0.039 Sum_probs=43.5
Q ss_pred HHHHHHhcCC--eEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 48 YARWLVSQNS--WGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 48 ~ar~LL~~~~--~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
.-|..|..-. ..++.|.+ +|.|.+.++++.-.. ..+.-.+.+.+.+.+...+||+++.+.++-|-.++
T Consensus 5 ~~r~~~~~~~~~V~vVTt~~---~g~~n~~t~s~~~~v-s~~Pp~v~v~i~~~s~T~~~i~~~~~F~Vnvl~~~ 74 (161)
T 1rz1_A 5 LFRNAMGKFATGVTVITTEL---NGAVHGMTANAFMSV-SLNPKLVLVSIGEKAKMLEKIQQSKKYAVNILSQD 74 (161)
T ss_dssp HHHHHHTTSCBCCEEEEEEE---TTEEEEEEECCEEEE-ETTTTEEEEEEETTCHHHHHHHHHCEEEEEECBGG
T ss_pred HHHHHHhcCCCceEEEEEcc---CCEEEEEEEeEEEEe-ECCCCEEEEEeCCCCchHHHHhhCCcEEEEECCHH
Confidence 3455555433 45666665 478888777766110 11222355666777888999999999999886653
No 61
>3hmz_A Flavin reductase domain protein, FMN-binding; FMN-binding domain of flavin reductases-like enzyme, structu genomics; HET: MSE FMN; 1.50A {Shewanella baltica}
Probab=26.20 E-value=17 Score=28.42 Aligned_cols=66 Identities=11% Similarity=-0.027 Sum_probs=43.1
Q ss_pred HHHHHHhcCCeEEEEeecCCCCCCeeEEEeccccCCCCCCCC-cEEEEEeCCCcchhhhccCCCeEEEEeeC
Q 047182 48 YARWLVSQNSWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSG-VPYFYLTTLDPTASNALKDKRSSLAISEY 118 (207)
Q Consensus 48 ~ar~LL~~~~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g-~~y~~~s~~s~h~~NL~~nprvSl~V~~~ 118 (207)
.+..+|.-....+++| +. +|.|.+.++++.-. ...+- .+.+.+.+.+...+||+++.+.++-|-..
T Consensus 21 ~~~~~l~p~pV~vVTt-~~--~g~~ng~t~s~~~~--vs~~PP~v~v~i~~~~~t~~~i~~~g~F~Vnvl~~ 87 (199)
T 3hmz_A 21 KAYRLLNHGPTVLVSA-RS--QGIDNVMAAAWCCA--LDFAPPKLTVVLDKMTKTREFIEQSGMFVIQVPTV 87 (199)
T ss_dssp GGGGGTTTCCCEEEEE-EE--TTEEEEEEESCEEE--EEETTEEEEEECCTTCHHHHHHHHHSEEEEEECBG
T ss_pred HhccccCCCCEEEEEe-CC--CCcceEEEeeeece--ecCCCCEEEEEECCcchHHHHHHHCCEEEEEECCH
Confidence 4556677777888888 44 58888887776610 11111 23344455667799999999999988654
No 62
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=24.85 E-value=1.5e+02 Score=22.57 Aligned_cols=68 Identities=10% Similarity=0.051 Sum_probs=43.5
Q ss_pred HHHHHHhcCCeE-EEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 48 YARWLVSQNSWG-VLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 48 ~ar~LL~~~~~~-vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
.-|+.+..-..+ +++|.+ +|.|.+.++++.-.. ..+.-.+.|.+.+.+...+||+++.+.++-|-..+
T Consensus 22 ~fr~a~~~~~~gVvVTt~~---~g~~~g~t~ss~~sv-S~~PPlv~v~i~~~~~T~~~i~~~g~F~Vnvl~~~ 90 (185)
T 4hx6_A 22 QLRRVFGDFPTGVTVVTVG---GSEPRGMTANSFTSV-SLSPPLVLICVGKDAVMHQRLTALPTFAVSVLEAG 90 (185)
T ss_dssp HHHHHHTTSCBCCEEEEEC---SSSCEEEEESCCEEE-ETTTTEEEEEEETTSHHHHHHHHSCEEEEEECBTT
T ss_pred HHHHHHhhCCCcEEEEEcC---CCEEEEEEEeeEeee-ECCCCEEEEEECCCcHHHHHHHHCCeEEEEECCHH
Confidence 456666654444 455544 478888777766110 11122355666777888999999999999986654
No 63
>2d5m_A Flavoredoxin; flavoprotein, FMN binding, electron transport; HET: FMN MES; 1.05A {Desulfovibrio vulgaris str}
Probab=24.62 E-value=37 Score=25.97 Aligned_cols=56 Identities=11% Similarity=0.031 Sum_probs=36.9
Q ss_pred eEEEEeecCCCCCCeeEEEeccccCCCCCCC-CcEEEE--EeCCCcchhhhccCCCeEEEEeeCC
Q 047182 58 WGVLSTISSGLGGAPFGNVVSFSDGLPNEGS-GVPYFY--LTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 58 ~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~-g~~y~~--~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
..+++|.+. +|.|.+.++++. ..-. .-|.+. +.+.+...+||+++.+.++-|-..+
T Consensus 16 V~vVtt~~~--~g~~n~~t~s~~----~~vs~~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~~ 74 (190)
T 2d5m_A 16 LFLVGTYDR--DSRPNIMAAAWA----GICCSQPPSIAVSLRKATYTYRSITERGAFTISIPSRA 74 (190)
T ss_dssp CEEEEEECT--TCCEEEEEECSE----EEEEETTEEEEECCCTTSHHHHHHHHHSEEEEEECBGG
T ss_pred eEEEEEecC--CCceEEEEeeee----ecccCCCCEEEEEEcCchhHHHHHHHCCeEEEEeCCHH
Confidence 456777765 488888888766 1111 113333 3455677999999999999886543
No 64
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=21.74 E-value=1.9e+02 Score=20.97 Aligned_cols=69 Identities=7% Similarity=-0.073 Sum_probs=44.6
Q ss_pred HHHHHHhcCCeE--EEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCC
Q 047182 48 YARWLVSQNSWG--VLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPL 120 (207)
Q Consensus 48 ~ar~LL~~~~~~--vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~ 120 (207)
.-|+.|..-..+ ++.|.+ +|.|.+.++++.-.. ..+.-.+.+.+.+.+...+||+++.+.++-|-..+.
T Consensus 4 ~~r~a~~~~~~~V~vVtt~~---~g~~ng~t~s~~~~v-s~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~~ 74 (149)
T 2ecu_A 4 AFKEALARFASGVTVVAARL---GEEERGMTATAFMSL-SLEPPLVALAVSERAKLLPVLEGAGAFTVSLLREGQ 74 (149)
T ss_dssp HHHHHHHTSCEECEEEEEEE---TTEEEEEEESCEEEE-ETTTTEEEEEEETTCTHHHHHHHHTEEEEEECBTTC
T ss_pred HHHHHHHhCCCeeEEEEEcc---CCeeEEEEEEeeecc-cCCCCEEEEEECCCChhHHHHHhCCEEEEEECcHHH
Confidence 345666665554 566655 477887777765110 111223556667778889999999999998866653
No 65
>1i0r_A Conserved hypothetical protein; six stranded antiparallel beta-barrel, FMN and NADP+ binding domain, oxidoreductase; HET: FMN; 1.50A {Archaeoglobus fulgidus} SCOP: b.45.1.2 PDB: 1i0s_A*
Probab=21.33 E-value=1.1e+02 Score=22.89 Aligned_cols=59 Identities=12% Similarity=0.066 Sum_probs=39.3
Q ss_pred eEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCCC
Q 047182 58 WGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYPL 120 (207)
Q Consensus 58 ~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~~ 120 (207)
..+++|.+ +|.|.+.++++.-.. ..+.-.+.+.+.+.+...+||+++.+.++-|-..+.
T Consensus 13 V~vVTt~~---~g~~ng~t~s~~~~v-s~~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~~ 71 (169)
T 1i0r_A 13 LYIVTSES---NGRKCGQIANTVFQL-TSKPVQIAVCLNKENDTHNAVKESGAFGVSVLELET 71 (169)
T ss_dssp CEEEEEEE---TTEEEEEEESCEEEE-ETTTTEEEEEEETTSHHHHHHHHHSEEEEEEEBTTC
T ss_pred eEEEEEcc---CCeEEEEEEEEEEEe-ECCCCEEEEEECCCchhHHHHHhCCEEEEEeCChhH
Confidence 45677765 477887777765110 111123456667778889999999999999876654
No 66
>1usc_A Putative styrene monooxygenase small component; FMN-binding protein, structural genomics, riken structural genomics/proteomics initiative; HET: FMN; 1.24A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1usf_A*
Probab=20.86 E-value=71 Score=24.15 Aligned_cols=59 Identities=12% Similarity=-0.018 Sum_probs=38.3
Q ss_pred CeEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 57 SWGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 57 ~~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
-..+++| +. +|.|.+.++++.-. ...+.-.+.+.+.+.+...+||+++.+.++-|-..+
T Consensus 20 ~V~vVtt-~~--~g~~n~~t~s~~~~-vs~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnil~~~ 78 (178)
T 1usc_A 20 VPAVVGV-RV--EERVNFCPAVWNTG-LSADPPLFGVSISPKRFTHGLLLKARRFSASFHPFG 78 (178)
T ss_dssp CCEEEEE-EE--TTEEEEEEESSEEE-EETTTTEEEEEECTTSHHHHHHHHHCEEEEEECBGG
T ss_pred ceEEEEE-CC--CCcceEEEEeeece-eeCCCCEEEEEECCCchHHHHHHHCCeEEEEeCCHH
Confidence 3567777 54 57888777775410 011122345666677788999999999998886543
No 67
>3bnk_A Flavoredoxin; protein-FMN complex, electron transport; HET: FMN; 2.05A {Methanosarcina acetivorans}
Probab=20.49 E-value=96 Score=23.80 Aligned_cols=58 Identities=9% Similarity=-0.066 Sum_probs=38.2
Q ss_pred eEEEEeecCCCCCCeeEEEeccccCCCCCCCCcEEEEEeCCCcchhhhccCCCeEEEEeeCC
Q 047182 58 WGVLSTISSGLGGAPFGNVVSFSDGLPNEGSGVPYFYLTTLDPTASNALKDKRSSLAISEYP 119 (207)
Q Consensus 58 ~~vLAT~s~~~~G~P~~S~v~y~dg~~~~~~g~~y~~~s~~s~h~~NL~~nprvSl~V~~~~ 119 (207)
..+++|. . +|.|.+.++++.- +...+.-.+.+.+.+.+...+||+++.+.++-|-..+
T Consensus 18 V~vVTt~-~--~g~~n~~t~s~~~-~vs~~PP~v~v~i~~~s~T~~~i~~~~~F~Vnil~~~ 75 (196)
T 3bnk_A 18 VTLLGAN-V--KGKANLMALGWVS-RVNANPPMLGVGVNKSHYTPEGIAENGSFSVNFPYSG 75 (196)
T ss_dssp CEEEEEE-E--TTEEEEEEECCEE-EEETTTTEEEEEEETTSSHHHHHHHHTEEEEEECBGG
T ss_pred EEEEEEe-c--CCcceEEEeeeee-eeeCCCCEEEEEECCcchHHHHHHHCCeEEEEECCHH
Confidence 4566676 3 5888887777661 0011112355666777888999999999999885543
No 68
>2i4r_A V-type ATP synthase subunit F; NESG, GR52A, ATP synthesis, hydrolase, structural genomics, protein structure initiative; 2.80A {Archaeoglobus fulgidus} SCOP: c.149.1.1
Probab=20.30 E-value=1.2e+02 Score=21.19 Aligned_cols=42 Identities=12% Similarity=0.206 Sum_probs=32.6
Q ss_pred HHHHHhhhheecccccccccCCCCCCCchHHHHHHHHHHhcCCeEEEEeec
Q 047182 15 LVLLFVVVGTQDSVEGRLIPAISNKPHPNDAAAYARWLVSQNSWGVLSTIS 65 (207)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ar~LL~~~~~~vLAT~s 65 (207)
.|+|+.|+|+..-. .-.+.+++.+..+++++...+|++--..
T Consensus 20 tv~GFrLaGi~~~~---------~~~~~ee~~~~~~~l~~~~digIIlIte 61 (102)
T 2i4r_A 20 FTIGFMLAGISDIY---------EVTSDEEIVKAVEDVLKRDDVGVVIMKQ 61 (102)
T ss_dssp HHHHHHHTTCCCEE---------ECCSHHHHHHHHHHHHHCSSEEEEEEEG
T ss_pred HHHHHHHcCCCccc---------CCCCHHHHHHHHHHHhhCCCeEEEEEeH
Confidence 58899999997633 1245678899999999988999887654
Done!