BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047185
(214 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6NWJ4|DNJC2_DANRE DnaJ homolog subfamily C member 2 OS=Danio rerio GN=dnajc2 PE=2
SV=1
Length = 618
Score = 80.9 bits (198), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 80/169 (47%), Gaps = 23/169 (13%)
Query: 60 WNEEDIEILKKQMVKNPVGKPKRWEVIAEAFNG------RHRVESVIKKAKELGEKKID- 112
W+EED+++L K + P G RWEVIA N R + VI KAK L +K+D
Sbjct: 450 WSEEDLQLLIKAVNLFPAGTNARWEVIANYMNQHSSSGVRRTAKDVINKAKTL--QKLDP 507
Query: 113 ------DSDSYNQFLKNRKAIDMRVVQENCEDSKKESQENVVVGG--GGGVWNAGEDIAL 164
+ ++ +F K A+ V D+ S+ VG W E L
Sbjct: 508 HQKDEINRKAFEKFKKEHSAVPPTV------DNAMPSERFDAVGADSNAAAWTTEEQKLL 561
Query: 165 LNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAGDE 213
ALK +P RWE+I+ AVPGRSK CMKR+ +L ++ KA E
Sbjct: 562 EQALKTYPVSTAERWERISEAVPGRSKKDCMKRYKELVEMIKAKKAAQE 610
>sp|P54103|DNJC2_MOUSE DnaJ homolog subfamily C member 2 OS=Mus musculus GN=Dnajc2 PE=1
SV=2
Length = 621
Score = 77.8 bits (190), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 8/162 (4%)
Query: 58 KEWNEEDIEILKKQMVKNPVGKPKRWEVIAEAFNGRHRVESVIKKAKEL--GEKKIDDSD 115
K W+E+D+++L K + P G RWEVIA N H V + AK++ K + D
Sbjct: 452 KNWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNI-HSSSGVKRTAKDVISKAKSLQKLD 510
Query: 116 SYNQFLKNRKAIDMRVVQENCEDSKKESQENVVVGGGGGV----WNAGEDIALLNALKAF 171
+ + N+KA D + +E+ S+ +S G + W E L ALK +
Sbjct: 511 PHQKDDINKKAFD-KFKKEHGVASQADSAAPSERFEGPCIDSTPWTTEEQKLLEQALKTY 569
Query: 172 PKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAGDE 213
P + P RWEKIA AVPGR+K CM+R+ +L ++ KA E
Sbjct: 570 PVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQE 611
>sp|Q1RMH9|DNJC2_BOVIN DnaJ homolog subfamily C member 2 OS=Bos taurus GN=DNAJC2 PE=2 SV=1
Length = 621
Score = 77.0 bits (188), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 58 KEWNEEDIEILKKQMVKNPVGKPKRWEVIAEAFNGRHRVESVIKKAKEL--GEKKIDDSD 115
K W+E+D+++L K + P G RWEVIA N H V + AK++ K + D
Sbjct: 452 KHWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNI-HSSSGVKRTAKDVIGKAKSLQKLD 510
Query: 116 SYNQFLKNRKAID-----MRVVQENCEDSKKESQENVVVGGGGGVWNAGEDIALLNALKA 170
+ + N+KA D VV + + E E W E L ALK
Sbjct: 511 PHQKDDINKKAFDKFKKEHGVVPQADNATPSERFEGPCTDFTP--WTTEEQKLLEQALKT 568
Query: 171 FPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAGDE 213
+P + P RWEKIA AVPGR+K CMKR+ +L ++ KA E
Sbjct: 569 YPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQE 611
>sp|Q6P2Y3|DNJC2_XENTR DnaJ homolog subfamily C member 2 OS=Xenopus tropicalis GN=dnajc2
PE=2 SV=2
Length = 620
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 7/158 (4%)
Query: 62 EEDIEILKKQMVKNPVGKPKRWEVIAEAFN-----GRHRV-ESVIKKAKELGEKKIDDSD 115
E+D+++L K + P G RWEVIA N G R + VI KAK L + D
Sbjct: 454 EDDLQLLIKAVNLFPAGTNARWEVIANYMNLHSISGIKRTSKDVINKAKSLQKLDPQQKD 513
Query: 116 SYNQFLKNRKAIDMRVVQENCEDSKKESQENVVVGGGGGVWNAGEDIALLNALKAFPKDV 175
N+ ++ + RVV ++ D+ S+ W E L ALK +P +
Sbjct: 514 DINKKAFDKFKKEHRVVPQSV-DNAVPSERFEGPAADMSPWTTEEQKLLEQALKTYPVNT 572
Query: 176 PLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAGDE 213
P RWEKIA AVPGRSK CMKR+ +L ++ KA E
Sbjct: 573 PERWEKIAEAVPGRSKKDCMKRYKELVEMVKAKKAAQE 610
>sp|Q99543|DNJC2_HUMAN DnaJ homolog subfamily C member 2 OS=Homo sapiens GN=DNAJC2 PE=1
SV=4
Length = 621
Score = 76.3 bits (186), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 58 KEWNEEDIEILKKQMVKNPVGKPKRWEVIAEAFNGRHRVESVIKKAKEL--GEKKIDDSD 115
K W+E+D+++L K + P G RWEVIA N H V + AK++ K + D
Sbjct: 452 KNWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNI-HSSSGVKRTAKDVIGKAKSLQKLD 510
Query: 116 SYNQFLKNRKAID-----MRVVQENCEDSKKESQENVVVGGGGGVWNAGEDIALLNALKA 170
+ + N+KA D VV + + E E W E L ALK
Sbjct: 511 PHQKDDINKKAFDKFKKEHGVVPQADNATPSERFEGPYTDFTP--WTTEEQKLLEQALKT 568
Query: 171 FPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAGDE 213
+P + P RWEKIA AVPGR+K CMKR+ +L ++ KA E
Sbjct: 569 YPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQE 611
>sp|Q4R8H2|DNJC2_MACFA DnaJ homolog subfamily C member 2 OS=Macaca fascicularis GN=DNAJC2
PE=2 SV=1
Length = 621
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 79/163 (48%), Gaps = 10/163 (6%)
Query: 58 KEWNEEDIEILKKQMVKNPVGKPKRWEVIAEAFNGRHRVESVIKKAKEL--GEKKIDDSD 115
K W+E+D+++L K + P G RWEVIA N H V + AK++ K + D
Sbjct: 452 KNWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNI-HSSSGVKRTAKDVIGKAKSLQKLD 510
Query: 116 SYNQFLKNRKAID-----MRVVQENCEDSKKESQENVVVGGGGGVWNAGEDIALLNALKA 170
+ + N+KA D VV + + E E W E L ALK
Sbjct: 511 PHQKDDINKKAFDKFKKEHGVVPQADNAAPSERFEGPYTDFTP--WTTEEQKLLEQALKT 568
Query: 171 FPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAGDE 213
+P + P RWEKIA AVPGR+K CMKR+ +L ++ KA E
Sbjct: 569 YPVNTPERWEKIAEAVPGRTKKDCMKRYKELVEMVKAKKAAQE 611
>sp|Q7TQ20|DNJC2_RAT DnaJ homolog subfamily C member 2 OS=Rattus norvegicus GN=Dnajc2
PE=2 SV=1
Length = 621
Score = 75.9 bits (185), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 8/162 (4%)
Query: 58 KEWNEEDIEILKKQMVKNPVGKPKRWEVIAEAFNGRHRVESVIKKAKEL--GEKKIDDSD 115
K W+E+D+++L K + P G RWEVIA N H V + AK++ K + D
Sbjct: 452 KNWSEDDLQLLIKAVNLFPAGTNSRWEVIANYMNI-HSSSGVKRTAKDVIGKAKSLQKLD 510
Query: 116 SYNQFLKNRKAIDMRVVQENCEDSKKESQENVVVGGGGGV----WNAGEDIALLNALKAF 171
+ + N+KA D + +E+ + +S G + W E L ALK +
Sbjct: 511 PHQKDDINKKAFD-KFKKEHGVAPQADSAAPSERFEGPCIDSIPWTTEEQKLLEQALKTY 569
Query: 172 PKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAGDE 213
P + P RWEKIA AVPGR+K CM+R+ +L ++ KA E
Sbjct: 570 PVNTPERWEKIAEAVPGRTKKDCMRRYKELVEMVKAKKAAQE 611
>sp|Q8S9H7|DIV_ANTMA Transcription factor DIVARICATA OS=Antirrhinum majus GN=DIVARICATA
PE=2 SV=1
Length = 307
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 156 WNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAG 211
W A E+ A NAL F ++ P RWE++A VPG++ M+++ +L+ D S +AG
Sbjct: 26 WTAAENKAFENALAVFDENTPNRWERVAERVPGKTVGDVMRQYKELEDDVSSIEAG 81
>sp|P34454|YMA9_CAEEL Uncharacterized protein F54F2.9 OS=Caenorhabditis elegans
GN=F54F2.9 PE=4 SV=3
Length = 414
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 56/140 (40%), Gaps = 24/140 (17%)
Query: 74 KNPVGKPKRWEVIAEAFNGRHRVESVIKKAKELGEKKIDDSDSYNQFLKNRKAIDMRV-V 132
K P G P RWE + N E VI A ++ + K +D Y + L I V V
Sbjct: 297 KYPAGTPNRWEQMGRVLN--RSAEDVIAMAGKMKQMKQED---YTKLLMT--TIQQSVPV 349
Query: 133 QENCEDSKKESQENVVVGGGGGVWNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKA 192
+E ED W+ E A AL+ +PK RWE+I+ + ++K
Sbjct: 350 EEKSEDD----------------WSQAEQKAFETALQKYPKGTDERWERISEEIGSKTKK 393
Query: 193 ACMKRFSDLKRDFRSSKAGD 212
M RF L R K D
Sbjct: 394 QVMVRFKQLAEMIRKKKTND 413
>sp|Q96KC8|DNJC1_HUMAN DnaJ homolog subfamily C member 1 OS=Homo sapiens GN=DNAJC1 PE=1
SV=1
Length = 554
Score = 43.5 bits (101), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 7/91 (7%)
Query: 21 PDFIPGSVPIVENSNGSIGNESKGEKVE-VLQRKSEEEK----EWNEEDIEILKKQMVKN 75
P + P +++ + E E+++ L+ ++ +K EW EED+ L + MVK
Sbjct: 286 PVYTPLETTYIQSYDHGTSIEEIEEQMDDWLENRNRTQKKQAPEWTEEDLSQLTRSMVKF 345
Query: 76 PVGKPKRWEVIAEAFNGRHRVESVIKKAKEL 106
P G P RWE IA GR V V KAK+L
Sbjct: 346 PGGTPGRWEKIAHEL-GRS-VTDVTTKAKQL 374
Score = 38.1 bits (87), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 128 DMRVVQENCEDSKKESQENVVVGGGGGVWNAGEDIALLNALKAFPKDVPLRWEKIAAAVP 187
D + ++N E S +ES W + L AL+ +P+ RW+KIA VP
Sbjct: 470 DFDIAEQN-ESSDEESLRKERARSAEEPWTQNQQKLLELALQQYPRGSSDRWDKIARCVP 528
Query: 188 GRSKAACMKRFSDL 201
+SK C+ R+ L
Sbjct: 529 SKSKEDCIARYKLL 542
>sp|Q61712|DNJC1_MOUSE DnaJ homolog subfamily C member 1 OS=Mus musculus GN=Dnajc1 PE=1
SV=1
Length = 552
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 59 EWNEEDIEILKKQMVKNPVGKPKRWEVIAEAFNGRHRVESVIKKAKEL 106
EW EED+ L + MVK P G P RW+ IA GR V V KAKEL
Sbjct: 327 EWTEEDLSQLTRSMVKFPGGTPGRWDKIAHEL-GRS-VTDVTTKAKEL 372
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 1/81 (1%)
Query: 121 LKNRKAIDMRVVQENCEDSKKESQENVVVGGGGGVWNAGEDIALLNALKAFPKDVPLRWE 180
L+ ++ D + ++N + S +E Q W + L AL+ +PK RW+
Sbjct: 461 LRGKRQKDFDISEQN-DSSDEEKQRKERTRAAEEAWTQSQQKLLELALQQYPKGASDRWD 519
Query: 181 KIAAAVPGRSKAACMKRFSDL 201
KIA VP +SK C+ R+ L
Sbjct: 520 KIAKCVPSKSKEDCIARYKLL 540
>sp|Q58FS3|RAD_ANTMA Transcription factor RADIALIS OS=Antirrhinum majus GN=RAD PE=1 SV=1
Length = 93
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%)
Query: 151 GGGGVWNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKA 210
G G W+A E+ A AL + KD P RW +A AV GR+ K + L D + ++
Sbjct: 6 GSGRPWSAKENKAFERALAVYDKDTPDRWANVARAVEGRTPEEVKKHYEILVEDIKYIES 65
Query: 211 G 211
G
Sbjct: 66 G 66
>sp|Q1G3C4|RADL4_ARATH Protein RADIALIS-like 4 OS=Arabidopsis thaliana GN=RL4 PE=2 SV=1
Length = 77
Score = 38.1 bits (87), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%)
Query: 160 EDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAG 211
ED AL F KD P RW+KIA AV G+S + + L RD ++G
Sbjct: 15 EDKQFEMALAKFDKDTPDRWQKIARAVGGKSTEEVKRHYELLLRDVNDIESG 66
>sp|F4JVB8|RADL1_ARATH Protein RADIALIS-like 1 OS=Arabidopsis thaliana GN=RL1 PE=2 SV=1
Length = 100
Score = 36.6 bits (83), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 156 WNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAG 211
W A ++ A AL + +D P RW+ +A V G++ + + L +D S + G
Sbjct: 14 WTAKQNKAFEQALATYDQDTPNRWQNVAKVVGGKTTEEVKRHYELLVQDINSIENG 69
>sp|Q9SIJ5|RADL2_ARATH Protein RADIALIS-like 2 OS=Arabidopsis thaliana GN=RL2 PE=2 SV=1
Length = 101
Score = 36.2 bits (82), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 156 WNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAG 211
W ++ A AL + +D P RW +A AV G++ +++ L RD S + G
Sbjct: 14 WTVKQNKAFERALAVYDQDTPDRWHNVARAVGGKTPEEAKRQYDLLVRDIESIENG 69
>sp|Q6NNN0|RADL3_ARATH Protein RADIALIS-like 3 OS=Arabidopsis thaliana GN=RL3 PE=2 SV=1
Length = 81
Score = 35.0 bits (79), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 26/56 (46%)
Query: 156 WNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAG 211
W E+ AL + +D P RW +A AV G+S + + L RD ++G
Sbjct: 12 WTRKENKLFERALATYDQDTPDRWHNVARAVGGKSAEEVRRHYELLIRDVNDIESG 67
>sp|Q6P0N0|M18BP_HUMAN Mis18-binding protein 1 OS=Homo sapiens GN=MIS18BP1 PE=1 SV=1
Length = 1132
Score = 35.0 bits (79), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 156 WNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRF 198
WN E L A + PK P W ++AAAV RS C +++
Sbjct: 880 WNEKELQKLHCAFASLPKHKPGFWSEVAAAVGSRSPEECQRKY 922
>sp|Q08AX9|K1841_XENLA Uncharacterized protein KIAA1841 homolog OS=Xenopus laevis PE=2
SV=1
Length = 715
Score = 34.7 bits (78), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 164 LLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLK 202
+L +L P+ P+ W+ +A VPG + C KRF +LK
Sbjct: 23 ILCSLVGVPQ--PISWDSVARLVPGYTPKECAKRFEELK 59
>sp|Q5SCW7|MATK_HUPLU Maturase K OS=Huperzia lucidula GN=matK PE=3 SV=2
Length = 532
Score = 34.3 bits (77), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Query: 92 GRHRVESVIKKAKELGEKKIDDSDSYNQF-LKNRKAIDMRVVQENCEDSKKESQENVVVG 150
R+ ++S KK KELG KKIDDS N F RK + ++ Q+N ++ + G
Sbjct: 16 SRNCLQSFFKK-KELGPKKIDDSSLNNHFSFITRKRLISKIRQQNLLETLALWINKYLSG 74
Query: 151 GGGGVWNAGEDIAL 164
GG N D +
Sbjct: 75 GGHNKKNQSFDYCI 88
>sp|O00299|CLIC1_HUMAN Chloride intracellular channel protein 1 OS=Homo sapiens GN=CLIC1
PE=1 SV=4
Length = 241
Score = 33.5 bits (75), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 36/89 (40%), Gaps = 3/89 (3%)
Query: 40 NESKGEKVEVLQRKSEEEKEWNEEDIEILKKQMVKNPVGKPKRWEVIAEAFNGRHRVESV 99
+E+ E V QRK + E D +L K + V K R I EAF G HR S
Sbjct: 153 DETSAEDEGVSQRKFLDGNELTLADCNLLPKLHIVQVVCKKYRGFTIPEAFRGVHRYLSN 212
Query: 100 IKKAKELGEKKIDDSD---SYNQFLKNRK 125
+E DD + +Y Q K K
Sbjct: 213 AYAREEFASTCPDDEEIELAYEQVAKALK 241
>sp|Q1A173|RADL6_ARATH Protein RADIALIS-like 6 OS=Arabidopsis thaliana GN=RL6 PE=2 SV=1
Length = 97
Score = 32.0 bits (71), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 156 WNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAG 211
W ++ AL + KD P RW +A AV G++ + + L D + + G
Sbjct: 12 WTFSQNKMFERALAVYDKDTPDRWHNVAKAVGGKTVEEVKRHYDILVEDLINIETG 67
>sp|Q5SXM2|SNPC4_HUMAN snRNA-activating protein complex subunit 4 OS=Homo sapiens
GN=SNAPC4 PE=1 SV=1
Length = 1469
Score = 32.0 bits (71), Expect = 3.0, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 154 GVWNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKRDFRSSKAG 211
G W ED LL A+ + + W KI VPGRS A C R+ L+R S K G
Sbjct: 402 GYWAPEEDAKLLQAVAKYGEQ---DWFKIREEVPGRSDAQCRDRY--LRRLHFSLKKG 454
>sp|Q8BP86|SNPC4_MOUSE snRNA-activating protein complex subunit 4 OS=Mus musculus
GN=Snapc4 PE=2 SV=2
Length = 1333
Score = 31.6 bits (70), Expect = 4.0, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Query: 154 GVWNAGEDIALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRF 198
G W ED LL A+ + W KI VPGRS A C R+
Sbjct: 402 GFWAPEEDAKLLQAVAKYGAQ---DWFKIREEVPGRSDAQCRDRY 443
Score = 30.8 bits (68), Expect = 7.7, Method: Composition-based stats.
Identities = 35/162 (21%), Positives = 69/162 (42%), Gaps = 14/162 (8%)
Query: 53 KSEEEKEWNEEDIEILKKQMVKNPVGKPKRWEVIAEAFNGRHRVESVIKKAKEL------ 106
K+ + KEW EE+ +L + + + VG + I GR ++ + + K L
Sbjct: 342 KTLKRKEWTEEEDHMLTQLVQEMRVGNHIPYRKIVYFMEGRDSMQLIYRWTKSLDPSLKR 401
Query: 107 GEKKIDDSDSYNQFLKNRKAID-MRVVQENCEDSKKESQENVV----VGGGGGVWNAGED 161
G ++ Q + A D ++ +E S + ++ + G WNA E+
Sbjct: 402 GFWAPEEDAKLLQAVAKYGAQDWFKIREEVPGRSDAQCRDRYIRRLHFSLKKGRWNAKEE 461
Query: 162 IALLNALKAFPKDVPLRWEKIAAAVPGRSKAACMKRFSDLKR 203
L+ ++ + W +IA+ +P RS + C+ ++ L R
Sbjct: 462 QQLIQLIEKYGVG---HWARIASELPHRSGSQCLSKWKILAR 500
>sp|Q9S7L2|MYB98_ARATH Transcription factor MYB98 OS=Arabidopsis thaliana GN=MYB98 PE=2
SV=1
Length = 427
Score = 31.6 bits (70), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 10/94 (10%)
Query: 113 DSDSY--NQFLKNRKAIDMRVVQENCEDSKKESQENVVVGGGGGVWNAGEDIALLNALKA 170
D+D Y F K + + ++ + S KE++++ +V G W A ED L+ ++
Sbjct: 178 DNDCYRATSFNKTKPFLTRKLSSSSSSSSWKETKKSTLVKGQ---WTAEEDRVLIQLVEK 234
Query: 171 FPKDVPLR-WEKIAAAVPGRSKAACMKRFSDLKR 203
+ LR W IA +PGR C +R+ + R
Sbjct: 235 YG----LRKWSHIAQVLPGRIGKQCRERWHNHLR 264
>sp|A1A5R8|K1841_RAT Uncharacterized protein KIAA1841 homolog OS=Rattus norvegicus PE=2
SV=1
Length = 737
Score = 31.6 bits (70), Expect = 4.3, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 177 LRWEKIAAAVPGRSKAACMKRFSDLK 202
+ WE +A VPG + C+KRF +LK
Sbjct: 34 INWETVARLVPGLTPKECVKRFDELK 59
>sp|Q68FF0|K1841_MOUSE Uncharacterized protein KIAA1841 OS=Mus musculus GN=Kiaa1841 PE=2
SV=2
Length = 718
Score = 31.2 bits (69), Expect = 5.0, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 17/26 (65%)
Query: 177 LRWEKIAAAVPGRSKAACMKRFSDLK 202
+ WE +A VPG + C+KRF +LK
Sbjct: 34 INWETVARLVPGLTPKECVKRFDELK 59
>sp|C5DP87|RRT14_ZYGRC Regulator of rDNA transcription 14 OS=Zygosaccharomyces rouxii
(strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 /
NRRL Y-229) GN=RRT14 PE=3 SV=1
Length = 212
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 23 FIPGSVPIVENSNGSIGNESKGEKVEVLQRKSEEEKEWNEEDIEILKK 70
+PG+V ENS + KG K +++ R + + E D+E LKK
Sbjct: 21 MLPGAVQSAENSAQKTKQKQKGSKAQLIDRNLKRRVQLQELDVEKLKK 68
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.309 0.129 0.364
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,085,255
Number of Sequences: 539616
Number of extensions: 3695551
Number of successful extensions: 14871
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 240
Number of HSP's that attempted gapping in prelim test: 14486
Number of HSP's gapped (non-prelim): 512
length of query: 214
length of database: 191,569,459
effective HSP length: 113
effective length of query: 101
effective length of database: 130,592,851
effective search space: 13189877951
effective search space used: 13189877951
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 59 (27.3 bits)