Query 047188
Match_columns 271
No_of_seqs 219 out of 401
Neff 5.9
Searched_HMMs 13730
Date Mon Mar 25 14:55:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047188.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/047188hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k1fa_ a.147.1.1 (A:) Bcr-Abl 37.5 26 0.0019 23.1 4.6 25 58-82 27-51 (67)
2 d2azea1 e.63.1.1 (A:199-346) T 35.0 21 0.0015 27.3 4.5 16 60-75 12-27 (148)
3 d2azeb1 e.63.1.2 (B:201-301) T 34.3 11 0.00082 27.0 2.6 26 58-83 5-30 (101)
4 d1q08a_ a.6.1.3 (A:) Transcrip 31.6 26 0.0019 24.1 4.3 23 60-82 45-67 (94)
5 d1yzma1 a.2.19.1 (A:456-501) F 20.6 53 0.0039 20.1 3.5 23 62-84 23-45 (46)
6 d2ad6b1 a.137.2.1 (B:1-69) Met 19.9 54 0.0039 21.5 3.7 29 63-91 34-62 (69)
7 d2azea1 e.63.1.1 (A:199-346) T 18.4 73 0.0053 24.1 4.7 23 60-82 5-27 (148)
8 d1w6sb_ a.137.2.1 (B:) Methano 16.7 70 0.0051 21.1 3.7 29 63-91 34-62 (73)
9 d1ivsa1 a.2.7.3 (A:797-862) Va 15.8 90 0.0065 19.6 4.1 26 63-88 3-28 (66)
10 d1nkpa_ a.38.1.1 (A:) Myc prot 15.3 96 0.007 20.5 4.4 17 65-81 63-79 (88)
No 1
>d1k1fa_ a.147.1.1 (A:) Bcr-Abl oncoprotein oligomerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.50 E-value=26 Score=23.06 Aligned_cols=25 Identities=28% Similarity=0.412 Sum_probs=18.1
Q ss_pred CchHhHHHhHHHHHHHHHHHHHHHH
Q 047188 58 EPKKKERELASWEADLKRREKEIKR 82 (271)
Q Consensus 58 ~l~~k~~eL~~kE~EL~~RE~el~~ 82 (271)
....-|+||++=..-|+|.|++|.+
T Consensus 27 sV~diE~eLerCk~~irrLeqel~~ 51 (67)
T d1k1fa_ 27 SVGDIEQELERAKASIRRLEQEVNQ 51 (67)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455777888777778888888764
No 2
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=35.01 E-value=21 Score=27.31 Aligned_cols=16 Identities=6% Similarity=0.285 Sum_probs=8.2
Q ss_pred hHhHHHhHHHHHHHHH
Q 047188 60 KKKERELASWEADLKR 75 (271)
Q Consensus 60 ~~k~~eL~~kE~EL~~ 75 (271)
.++.+++++|.++|++
T Consensus 12 ~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 12 QRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444455555555554
No 3
>d2azeb1 e.63.1.2 (B:201-301) Transcription factor E2F1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.25 E-value=11 Score=26.98 Aligned_cols=26 Identities=15% Similarity=0.091 Sum_probs=17.8
Q ss_pred CchHhHHHhHHHHHHHHHHHHHHHHH
Q 047188 58 EPKKKERELASWEADLKRREKEIKRR 83 (271)
Q Consensus 58 ~l~~k~~eL~~kE~EL~~RE~el~~r 83 (271)
.|++--++|+++|++|++.-+.++.+
T Consensus 5 ~L~~El~~L~~~E~~LD~li~~~~~~ 30 (101)
T d2azeb1 5 GLTQDLRQLQESEQQLDHLMNICTTQ 30 (101)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666678888888887765555443
No 4
>d1q08a_ a.6.1.3 (A:) Transcriptional regulator ZntR {Escherichia coli [TaxId: 562]}
Probab=31.61 E-value=26 Score=24.06 Aligned_cols=23 Identities=17% Similarity=0.416 Sum_probs=16.1
Q ss_pred hHhHHHhHHHHHHHHHHHHHHHH
Q 047188 60 KKKERELASWEADLKRREKEIKR 82 (271)
Q Consensus 60 ~~k~~eL~~kE~EL~~RE~el~~ 82 (271)
.+|-+|+++|-+||++.+++|+.
T Consensus 45 ~~kl~~i~~kI~~L~~l~~~L~~ 67 (94)
T d1q08a_ 45 QERLQEVEARIAELQSMQRSLQR 67 (94)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666777777777777777764
No 5
>d1yzma1 a.2.19.1 (A:456-501) FYVE finger-containing Rab5 effector protein rabenosyn-5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.62 E-value=53 Score=20.06 Aligned_cols=23 Identities=13% Similarity=0.381 Sum_probs=16.5
Q ss_pred hHHHhHHHHHHHHHHHHHHHHHH
Q 047188 62 KERELASWEADLKRREKEIKRRE 84 (271)
Q Consensus 62 k~~eL~~kE~EL~~RE~el~~re 84 (271)
|-.|.+-.|+.|+..++|+.+++
T Consensus 23 R~dEV~~Le~NLreLq~e~~~qq 45 (46)
T d1yzma1 23 RMDEVRTLQENLRQLQDEYDQQQ 45 (46)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHhhc
Confidence 45577777888888777777653
No 6
>d2ad6b1 a.137.2.1 (B:1-69) Methanol dehydrogenase, light chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}
Probab=19.90 E-value=54 Score=21.48 Aligned_cols=29 Identities=21% Similarity=0.223 Sum_probs=16.3
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 047188 63 ERELASWEADLKRREKEIKRREEAIVKAG 91 (271)
Q Consensus 63 ~~eL~~kE~EL~~RE~el~~re~~~~~~g 91 (271)
.+||.+.++.++..|+.-+.|-++.+..|
T Consensus 34 p~EL~kQ~~si~ame~RN~~Rv~~fkkTG 62 (69)
T d2ad6b1 34 PVELNKQEESIKAMDARNAKRIANAKSSG 62 (69)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34565555556666655555555555544
No 7
>d2azea1 e.63.1.1 (A:199-346) Transcription factor DP-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=18.36 E-value=73 Score=24.06 Aligned_cols=23 Identities=13% Similarity=0.241 Sum_probs=12.7
Q ss_pred hHhHHHhHHHHHHHHHHHHHHHH
Q 047188 60 KKKERELASWEADLKRREKEIKR 82 (271)
Q Consensus 60 ~~k~~eL~~kE~EL~~RE~el~~ 82 (271)
.+-++|.+++.++++++.++|+.
T Consensus 5 ~~Le~E~~~~~erI~~K~~~Lqe 27 (148)
T d2azea1 5 QNLEVERQRRLERIKQKQSQLQE 27 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455555666666665555543
No 8
>d1w6sb_ a.137.2.1 (B:) Methanol dehydrogenase, light chain {Methylobacterium extorquens [TaxId: 408]}
Probab=16.74 E-value=70 Score=21.13 Aligned_cols=29 Identities=31% Similarity=0.426 Sum_probs=16.0
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHHhcC
Q 047188 63 ERELASWEADLKRREKEIKRREEAIVKAG 91 (271)
Q Consensus 63 ~~eL~~kE~EL~~RE~el~~re~~~~~~g 91 (271)
.+||.+.++.++..|+.-+.|-++.+..|
T Consensus 34 p~EL~kQ~~si~ame~RN~~Rv~~fkkTG 62 (73)
T d1w6sb_ 34 PKELNKQADSIKQMEERNKKRVENFKKTG 62 (73)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 34555555555566655555555555554
No 9
>d1ivsa1 a.2.7.3 (A:797-862) Valyl-tRNA synthetase (ValRS) C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=15.77 E-value=90 Score=19.60 Aligned_cols=26 Identities=19% Similarity=0.077 Sum_probs=18.5
Q ss_pred HHHhHHHHHHHHHHHHHHHHHHHHHH
Q 047188 63 ERELASWEADLKRREKEIKRREEAIV 88 (271)
Q Consensus 63 ~~eL~~kE~EL~~RE~el~~re~~~~ 88 (271)
++|++|.+.+|++.+.++.+-+..+.
T Consensus 3 ~~E~~RL~K~l~kl~~~i~~~~~kL~ 28 (66)
T d1ivsa1 3 EEWRRRQEKRLKELLALAERSQRKLA 28 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 45777788888888887777665543
No 10
>d1nkpa_ a.38.1.1 (A:) Myc proto-oncogene protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.29 E-value=96 Score=20.48 Aligned_cols=17 Identities=35% Similarity=0.491 Sum_probs=6.0
Q ss_pred HhHHHHHHHHHHHHHHH
Q 047188 65 ELASWEADLKRREKEIK 81 (271)
Q Consensus 65 eL~~kE~EL~~RE~el~ 81 (271)
+|+...++|+++.++|+
T Consensus 63 ~l~~~~~~l~~~~~~L~ 79 (88)
T d1nkpa_ 63 KLISEEDLLRKRREQLK 79 (88)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33333333333333333
Done!