Your job contains 1 sequence.
>047192
MESCCSTCTKLSSASPSHPCIADSRGFGRKFTRNSLDHHLLSSSLPKPFLQVNNARNTFL
YRRSSSRFPSTASRGIISAEAWDFGRFLKTLYFFNGPPSPAKFVEFLVEKLSGPSPKEPV
KAMETSGIVLVAGATGGVGRRVVDILRNKGLPVRVLVRNEEKARKMLGPDVDLIVGDITK
ENTLTPEYFKGVRKVINAVSVIVGPKEGDTPDRAKYSQGIKFFEPEIKGDSPEMVEYLGM
RNLINAVKGSVGLQNGKLLFGFEENSLKELPWGALDDVVMGGVSESTFQIDRTGGENGAP
TGLFKGVVSTANNGGFTSIRTRNFAEPEDLSAYDGLKLRLKGDGRRYKFVVRTSSDWDTV
GYTASFDTVGGQWQSIRLPFSSLRPIFQARTVLDAPPFDPSNIVSLQLMFSKFEYDGKLN
PTFVEGAFQLPVSSIQSYIKDPVTPRFVHVSSAGVTRPERPGLDLSKQPPAVRLNKELGF
ILTFKLKGEDLIRESGIPYTIVRPCALTEEPAGADLIFDQGDNITGKISREEVARICVAA
LESPFALDKTFEVKSTIPFSESFTVDPENPPQEKDYNIYFKGLKDGITGKESLEQSPVPV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047192
(600 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2015651 - symbol:HCF173 "high chlorophyll fluo... 166 2.4e-16 2
TAIR|locus:2185228 - symbol:AT5G02240 species:3702 "Arabi... 117 1.9e-11 2
UNIPROTKB|Q489J3 - symbol:CPS_0513 "Putative uncharacteri... 156 2.3e-10 1
TIGR_CMR|CPS_0513 - symbol:CPS_0513 "conserved hypothetic... 156 2.3e-10 1
TAIR|locus:2193937 - symbol:AT1G72420 "AT1G72420" species... 163 2.9e-10 1
TAIR|locus:2040716 - symbol:AT2G37660 species:3702 "Arabi... 115 8.1e-10 2
POMBASE|SPAC9E9.15 - symbol:SPAC9E9.15 "CIA30 protein (pr... 155 2.4e-09 1
UNIPROTKB|Q8ECL6 - symbol:SO_3121 "Uncharacterized protei... 140 1.2e-08 1
TIGR_CMR|SO_3121 - symbol:SO_3121 "conserved hypothetical... 140 1.2e-08 1
TAIR|locus:2030270 - symbol:AT1G72640 species:3702 "Arabi... 100 7.7e-06 2
TAIR|locus:2040854 - symbol:AT2G34460 species:3702 "Arabi... 122 2.4e-05 2
TAIR|locus:2029100 - symbol:AT1G17350 "AT1G17350" species... 113 0.00080 1
>TAIR|locus:2015651 [details] [associations]
symbol:HCF173 "high chlorophyll fluorescence phenotype
173" species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0009507 "chloroplast" evidence=ISM;IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0006413
"translational initiation" evidence=IMP] [GO:0009570 "chloroplast
stroma" evidence=IDA] [GO:0010155 "regulation of proton transport"
evidence=RCA] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR016040 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009570 GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0006413 GO:GO:0009941 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR013857 Pfam:PF08547 eggNOG:COG0702
EMBL:AY062632 EMBL:AY128723 IPI:IPI00529705 RefSeq:NP_173116.1
UniGene:At.27283 UniGene:At.49888 ProteinModelPortal:Q8W4D6
SMR:Q8W4D6 STRING:Q8W4D6 PaxDb:Q8W4D6 PRIDE:Q8W4D6
EnsemblPlants:AT1G16720.1 GeneID:838243 KEGG:ath:AT1G16720
TAIR:At1g16720 HOGENOM:HOG000238768 InParanoid:Q8W4D6 OMA:KANNYLT
PhylomeDB:Q8W4D6 ProtClustDB:CLSN2679821 ArrayExpress:Q8W4D6
Genevestigator:Q8W4D6 Uniprot:Q8W4D6
Length = 598
Score = 166 (63.5 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 38/74 (51%), Positives = 48/74 (64%)
Query: 481 ILTFKLKGEDLIRESGIPYTIVRPCALTEEPAGAD-LIFDQGDNITGKISREEVARICVA 539
+L K GED +R SG+ YTI+RP L EEP G LIFDQG+ I+ IS +VA ICV
Sbjct: 487 VLKAKRAGEDSLRRSGLGYTIIRPGPLKEEPGGQRALIFDQGNRISQGISCADVADICVK 546
Query: 540 ALESPFALDKTFEV 553
AL A +K+F+V
Sbjct: 547 ALHDSTARNKSFDV 560
Score = 118 (46.6 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
Identities = 66/272 (24%), Positives = 111/272 (40%)
Query: 149 KGLPVRVLVRNE-EKARKMLGPDVDLIVGDITKENTLTPEYFKGVRKVINAVSVIVGPKE 207
+G V+ LVR + E+ ML VD++VGD+ + +TL + K+I + +
Sbjct: 185 RGYTVKALVRKQDEEVMSMLPRSVDIVVGDVGEPSTLKSAV-ESCSKIIYCATA----RS 239
Query: 208 GDTPDRAKYSQ-GIKFFEPEIKGDSPEMVEYLGMRNLINAVKGSVGLQNGKLLFGFEENS 266
T D + G+ + + + + + A K S KLL + S
Sbjct: 240 TITADLTRVDHLGVYNLTKAFQDYNNRLAQ-------LRAGKSS----KSKLLLA-KFKS 287
Query: 267 LKELP-WGALDDVVMGGVSESTFQ--IDRTGGENGAPTGLFKGVVSTANNGGFTSIRTRN 323
+ L W + S + +D F G V T GG+ + ++
Sbjct: 288 AESLDGWEIRQGTYFQDTTASKYDGGMDAKFEFTETERAEFSGYVFT--RGGYVEL-SKK 344
Query: 324 FAEP--EDLSAYDGLKLRLKGDGRRYKFVVRT--SSDWD-TVGYTASFDTVGGQWQSIRL 378
+ P L Y+GL L + G+GR Y ++ SSD + Y A T G + +R+
Sbjct: 345 LSLPLGTTLDRYEGLVLSVGGNGRSYVVILEAGPSSDMSQSKQYFARISTKAG-FCRVRV 403
Query: 379 PFSSLRPIFQARTVLDAPPFDPSNIVSLQLMF 410
PFS+ RP+ + PP DP + +L + F
Sbjct: 404 PFSAFRPVNP-----EDPPLDPFLVHTLTIRF 430
>TAIR|locus:2185228 [details] [associations]
symbol:AT5G02240 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0048046 "apoplast" evidence=IDA] [GO:0009737
"response to abscisic acid stimulus" evidence=IEP] [GO:0009570
"chloroplast stroma" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] InterPro:IPR016040 GO:GO:0005829 GO:GO:0005886
GO:GO:0009737 GO:GO:0005774 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0048046
EMBL:AL162508 eggNOG:COG0702 UniGene:At.21103 HOGENOM:HOG000262433
ProtClustDB:CLSN2688756 EMBL:AY142045 EMBL:BT000751 EMBL:AK221714
EMBL:AF410336 IPI:IPI00530877 PIR:T48245 RefSeq:NP_568098.1
PDB:1XQ6 PDB:1YBM PDB:2Q46 PDB:2Q4B PDBsum:1XQ6 PDBsum:1YBM
PDBsum:2Q46 PDBsum:2Q4B ProteinModelPortal:Q94EG6 SMR:Q94EG6
PaxDb:Q94EG6 PRIDE:Q94EG6 ProMEX:Q94EG6 DNASU:830851
EnsemblPlants:AT5G02240.1 GeneID:830851 KEGG:ath:AT5G02240
TAIR:At5g02240 InParanoid:Q94EG6 OMA:KTGFRIA PhylomeDB:Q94EG6
EvolutionaryTrace:Q94EG6 Genevestigator:Q94EG6 GermOnline:AT5G02240
Uniprot:Q94EG6
Length = 253
Score = 117 (46.2 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 38/113 (33%), Positives = 57/113 (50%)
Query: 448 VHVSSAGVTRPERPGLDLSKQPPAVRLNKELGFILTFKLKGEDLIRESGIPYTIVRPCAL 507
V V S G T P+ P L+K L G IL +K K E + +SG PYTI+R L
Sbjct: 129 VVVGSMGGTNPDHP---LNK------LGN--GNILVWKRKAEQYLADSGTPYTIIRAGGL 177
Query: 508 TEEPAGA-DLIFDQGDNI----TGKISREEVARICVAALESPFALDKTFEVKS 555
++ G +L+ + D + T + R +VA +C+ AL A +K F++ S
Sbjct: 178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGS 230
Score = 110 (43.8 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 29/93 (31%), Positives = 50/93 (53%)
Query: 156 LVRNEEKARKMLGPDVDLIVGDITKENTLTPEYFKGVRKVINAVSVIVGPKEGDTPDRAK 215
LVR+ + K +G + D+ +GDIT +++ P F+G+ ++ S + K G P +
Sbjct: 36 LVRSAQGKEK-IGGEADVFIGDITDADSINPA-FQGIDALVILTSAVPKMKPGFDPTKGG 93
Query: 216 YSQGIKFFEPEIKGDSPEMVEYLGMRNLINAVK 248
+ I FE G PE V+++G +N I+A K
Sbjct: 94 RPEFI--FED---GQYPEQVDWIGQKNQIDAAK 121
Score = 38 (18.4 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 16/67 (23%), Positives = 31/67 (46%)
Query: 275 LDDVVMGGVSESTFQIDRTGGENGAPTGLFKGVVSTANN----GGFTSIRTRNFAEPEDL 330
L V++ G S T QI + G+ + KG+V +A GG + + + + +
Sbjct: 4 LPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSI 63
Query: 331 S-AYDGL 336
+ A+ G+
Sbjct: 64 NPAFQGI 70
>UNIPROTKB|Q489J3 [details] [associations]
symbol:CPS_0513 "Putative uncharacterized protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR013857 Pfam:PF08547 eggNOG:COG0702
RefSeq:YP_267271.1 ProteinModelPortal:Q489J3 STRING:Q489J3
GeneID:3518648 KEGG:cps:CPS_0513 PATRIC:21464375
HOGENOM:HOG000289870 OMA:NDNVMGG ProtClustDB:CLSK741139
BioCyc:CPSY167879:GI48-608-MONOMER Uniprot:Q489J3
Length = 166
Score = 156 (60.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 44/152 (28%), Positives = 74/152 (48%)
Query: 253 LQNGKLLFGFE-ENSLKELPWGALDDVVMGGVSESTFQIDRTGGENGAPTGLFKGVVSTA 311
++ +L F+ E SL E W +D VMGG+S + Q+D +F G +S
Sbjct: 1 MKKSTVLITFDNERSLDE--WRVTNDSVMGGLSVANTQLDNK-------VFVFSGNISIE 51
Query: 312 NNGGFTSIRTRNFAEPEDLSAYDGLKLRLKGDGRRYKFVVRTSSDWDTVGYTASFDTVGG 371
N GGFTSI + P+D+ + + +++ GDG RY+ VR+ + Y FDT G
Sbjct: 52 NYGGFTSIFKKLPTLPDDI---ESITIKVLGDGNRYQLRVRSQVAGYELAYKIDFDTKKG 108
Query: 372 QWQSIRLPFSSLRPIFQARTVLDAPPFDPSNI 403
+ + + + F+ R + +AP + +I
Sbjct: 109 EVEDHTFNLTDFKASFRGRIIENAPLLEAESI 140
>TIGR_CMR|CPS_0513 [details] [associations]
symbol:CPS_0513 "conserved hypothetical protein"
species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
EMBL:CP000083 GenomeReviews:CP000083_GR InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR013857 Pfam:PF08547 eggNOG:COG0702
RefSeq:YP_267271.1 ProteinModelPortal:Q489J3 STRING:Q489J3
GeneID:3518648 KEGG:cps:CPS_0513 PATRIC:21464375
HOGENOM:HOG000289870 OMA:NDNVMGG ProtClustDB:CLSK741139
BioCyc:CPSY167879:GI48-608-MONOMER Uniprot:Q489J3
Length = 166
Score = 156 (60.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 44/152 (28%), Positives = 74/152 (48%)
Query: 253 LQNGKLLFGFE-ENSLKELPWGALDDVVMGGVSESTFQIDRTGGENGAPTGLFKGVVSTA 311
++ +L F+ E SL E W +D VMGG+S + Q+D +F G +S
Sbjct: 1 MKKSTVLITFDNERSLDE--WRVTNDSVMGGLSVANTQLDNK-------VFVFSGNISIE 51
Query: 312 NNGGFTSIRTRNFAEPEDLSAYDGLKLRLKGDGRRYKFVVRTSSDWDTVGYTASFDTVGG 371
N GGFTSI + P+D+ + + +++ GDG RY+ VR+ + Y FDT G
Sbjct: 52 NYGGFTSIFKKLPTLPDDI---ESITIKVLGDGNRYQLRVRSQVAGYELAYKIDFDTKKG 108
Query: 372 QWQSIRLPFSSLRPIFQARTVLDAPPFDPSNI 403
+ + + + F+ R + +AP + +I
Sbjct: 109 EVEDHTFNLTDFKASFRGRIIENAPLLEAESI 140
>TAIR|locus:2193937 [details] [associations]
symbol:AT1G72420 "AT1G72420" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002684 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR013857 Pfam:PF08547 IPI:IPI00527823 RefSeq:NP_177386.2
UniGene:At.35102 PRIDE:F4IDC0 EnsemblPlants:AT1G72420.1
GeneID:843574 KEGG:ath:AT1G72420 OMA:IFNFNSK Uniprot:F4IDC0
Length = 228
Score = 163 (62.4 bits), Expect = 2.9e-10, P = 2.9e-10
Identities = 55/198 (27%), Positives = 92/198 (46%)
Query: 257 KLLFGFEENSLKELP-WGALDDVVMGGVSESTFQIDRTGGENGAPTGLFKGVVST----- 310
K +F F NS ++L W D GG+S ++ +I + GG G+F G +ST
Sbjct: 32 KCIFKF--NSKEDLKTWHLYSDSEYGGLSSASLEI-KDGGNRSDCNGVFSGNLSTDMREG 88
Query: 311 ----ANNGGFTSIRTRNFAEPEDLSAYDGLKLRLKGDGRRYKFVVRTSSDWDTVG----- 361
N GF +R++ F DL YD + LRLKGDGR Y + T + ++ G
Sbjct: 89 SKWNINRSGFCGMRSKKFDGFIDLEGYDSIALRLKGDGRCYISTIYTENWVNSPGQAEDN 148
Query: 362 -YTASFDTVGGQWQSIRLPFSSLRPIFQARTVLDAP-PFDPSNIVSLQLMFSKFEYDGKL 419
+ A G W + ++P + P ++ V+DA +P ++V + L + + G +
Sbjct: 149 SWQAFVFAPKGNWYTAKVPLTRYLPTWKGN-VIDAEMEMNPGHVVGMSLSVNA-QGGGFI 206
Query: 420 NPTFVEGAFQLPVSSIQS 437
G FQ+ + I++
Sbjct: 207 GAKSGAGDFQVEIDWIKA 224
>TAIR|locus:2040716 [details] [associations]
symbol:AT2G37660 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003854
"3-beta-hydroxy-delta5-steroid dehydrogenase activity"
evidence=IEA] [GO:0006694 "steroid biosynthetic process"
evidence=IEA] [GO:0016616 "oxidoreductase activity, acting on the
CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA] [GO:0042742
"defense response to bacterium" evidence=IEP;RCA] [GO:0048046
"apoplast" evidence=IDA] [GO:0005507 "copper ion binding"
evidence=IDA] [GO:0000272 "polysaccharide catabolic process"
evidence=RCA] [GO:0005982 "starch metabolic process" evidence=RCA]
[GO:0006364 "rRNA processing" evidence=RCA] [GO:0009409 "response
to cold" evidence=RCA] [GO:0009664 "plant-type cell wall
organization" evidence=RCA] [GO:0009697 "salicylic acid
biosynthetic process" evidence=RCA] [GO:0009814 "defense response,
incompatible interaction" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019684 "photosynthesis, light reaction"
evidence=RCA] InterPro:IPR016040 EMBL:AC004684 GO:GO:0009570
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0048046 GO:GO:0042742 GO:GO:0005507
GO:GO:0009579 eggNOG:COG0702 UniGene:At.26205 UniGene:At.66411
HOGENOM:HOG000262433 EMBL:AY042827 EMBL:AY081456 EMBL:AY085201
IPI:IPI00539231 PIR:T02532 RefSeq:NP_565868.1
ProteinModelPortal:O80934 SMR:O80934 STRING:O80934
SWISS-2DPAGE:O80934 World-2DPAGE:0003:O80934 PaxDb:O80934
PRIDE:O80934 ProMEX:O80934 EnsemblPlants:AT2G37660.1 GeneID:818343
KEGG:ath:AT2G37660 TAIR:At2g37660 InParanoid:O80934 OMA:GTNPNHP
PhylomeDB:O80934 ProtClustDB:CLSN2688756 Genevestigator:O80934
GermOnline:AT2G37660 Uniprot:O80934
Length = 325
Score = 115 (45.5 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 29/80 (36%), Positives = 45/80 (56%)
Query: 481 ILTFKLKGEDLIRESGIPYTIVRPCALTEEPAGA-DLIFDQGDNI----TGKISREEVAR 535
IL +K K E + +SGIPYTI+R L ++ G +L+ + D + T I+R +VA
Sbjct: 223 ILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGGIRELLVGKDDELLETETRTIARADVAE 282
Query: 536 ICVAALESPFALDKTFEVKS 555
+CV AL+ A K ++ S
Sbjct: 283 VCVQALQLEEAKFKALDLAS 302
Score = 101 (40.6 bits), Expect = 8.1e-10, Sum P(2) = 8.1e-10
Identities = 29/104 (27%), Positives = 52/104 (50%)
Query: 147 RNKGLPVRVLVRNEEKARKMLGPDVDLIVGDITKENTLTPEYFKGVRKVINAVSVIVGPK 206
R++ R LVR +E K+ G D ++ +GDI ++ P +G+ ++ S + K
Sbjct: 99 RSEQFVARGLVRTKESKEKINGED-EVFIGDIRDTASIAPAV-EGIDALVILTSAVPQMK 156
Query: 207 EGDTPDRAKYSQGIKFFEPEIKGDSPEMVEYLGMRNLINAVKGS 250
G P + + FF+ G PE V+++G +N I+A K +
Sbjct: 157 PGFDPSKGGRPEF--FFDD---GAYPEQVDWIGQKNQIDAAKAA 195
>POMBASE|SPAC9E9.15 [details] [associations]
symbol:SPAC9E9.15 "CIA30 protein (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] PomBase:SPAC9E9.15 GO:GO:0005829
GO:GO:0005634 EMBL:CU329670 InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR013857 Pfam:PF08547 eggNOG:COG0702 PIR:T39222
RefSeq:NP_594588.1 EnsemblFungi:SPAC9E9.15.1 GeneID:2542323
KEGG:spo:SPAC9E9.15 HOGENOM:HOG000161687 OMA:DTKTLGG
OrthoDB:EOG4Z9261 NextBio:20803384 Uniprot:O14297
Length = 219
Score = 155 (59.6 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 56/199 (28%), Positives = 92/199 (46%)
Query: 258 LLFGFEENSLKELPWGALDDVVMGGVSESTFQIDRTGGENGAPTGLFKGVVSTANNGG-- 315
+LFG EN E + A+DD V GG S S ++ +G F G + T GG
Sbjct: 3 VLFGQPEN-WHEQDFRAVDDRVRGGSSISHLTEEKDS--DGKSRAKFWGTLDTKTLGGAG 59
Query: 316 FTSIRTRNFAEPEDLSAYDGLKLRL-KGDGRRYKFVVRTS-SDWDT------VGYTASFD 367
F S T +L + G++L + K D +Y F+++ DW+T + Y F
Sbjct: 60 FCSQATNIKDRTWNLKEFKGIELDIAKSDSYKYTFIIKDCHQDWETSDEKSSLSYEYDFT 119
Query: 368 TV-GGQWQSIRLPFSSLRPIFQARTVLDAPPFDPSNIVSLQLMFSKFEYDGKLNPTFVEG 426
+ + Q + +PFS +P ++ R V AP D S I +M F ++ + G
Sbjct: 120 PIYSKEDQVVSIPFSEFKPTYRGRPVEGAPELDVSKITQFSIMIRSF-FNSQ------SG 172
Query: 427 AFQLPVSSIQSYIKD-PVT 444
++L ++SI++ K+ P T
Sbjct: 173 DYELVLNSIRAIPKNVPFT 191
>UNIPROTKB|Q8ECL6 [details] [associations]
symbol:SO_3121 "Uncharacterized protein" species:211586
"Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR008979 SUPFAM:SSF49785
InterPro:IPR013857 Pfam:PF08547 HOGENOM:HOG000289870
RefSeq:NP_718682.1 GeneID:1170810 KEGG:son:SO_3121 PATRIC:23525888
OMA:FASVRCE ProtClustDB:CLSK907011 Uniprot:Q8ECL6
Length = 174
Score = 140 (54.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 258 LLFGFEENSLKELPWGALDDVVMGGVSESTFQIDRTGGENGAPTGLFKGVVSTANNGGFT 317
+LF F++ S W ++D VMGG+S S I G G+F G VS AN GGF
Sbjct: 2 ILFDFKDLSAAT-SWYGVNDTVMGGLSRSKLTISPLG------YGIFSGHVSLANGGGFA 54
Query: 318 SIRTRNFAEPEDLSAYDGLKLRLKGD-GRRYKFVVRTSSDWDTVGYTA--------SFDT 368
S+R F E +++ + G+ L L D ++YK ++ + + Y A +F
Sbjct: 55 SVRCE-F-EHVNVAEFTGIYLDLDSDRSKQYKVNLKDADTPQSTVYQAIMPAPTHQTFGL 112
Query: 369 VGG---QWQSIRLPFSSLRPIFQARTVLDAPPFDPSNIVSLQLM 409
G WQ I +PF++ P + + + A D + S+ L+
Sbjct: 113 SGASAIHWQRIEIPFTNFHPQCRGKPIAGAA-IDLRRLTSIGLV 155
>TIGR_CMR|SO_3121 [details] [associations]
symbol:SO_3121 "conserved hypothetical protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
EMBL:AE014299 GenomeReviews:AE014299_GR InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR013857 Pfam:PF08547
HOGENOM:HOG000289870 RefSeq:NP_718682.1 GeneID:1170810
KEGG:son:SO_3121 PATRIC:23525888 OMA:FASVRCE ProtClustDB:CLSK907011
Uniprot:Q8ECL6
Length = 174
Score = 140 (54.3 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 48/164 (29%), Positives = 77/164 (46%)
Query: 258 LLFGFEENSLKELPWGALDDVVMGGVSESTFQIDRTGGENGAPTGLFKGVVSTANNGGFT 317
+LF F++ S W ++D VMGG+S S I G G+F G VS AN GGF
Sbjct: 2 ILFDFKDLSAAT-SWYGVNDTVMGGLSRSKLTISPLG------YGIFSGHVSLANGGGFA 54
Query: 318 SIRTRNFAEPEDLSAYDGLKLRLKGD-GRRYKFVVRTSSDWDTVGYTA--------SFDT 368
S+R F E +++ + G+ L L D ++YK ++ + + Y A +F
Sbjct: 55 SVRCE-F-EHVNVAEFTGIYLDLDSDRSKQYKVNLKDADTPQSTVYQAIMPAPTHQTFGL 112
Query: 369 VGG---QWQSIRLPFSSLRPIFQARTVLDAPPFDPSNIVSLQLM 409
G WQ I +PF++ P + + + A D + S+ L+
Sbjct: 113 SGASAIHWQRIEIPFTNFHPQCRGKPIAGAA-IDLRRLTSIGLV 155
>TAIR|locus:2030270 [details] [associations]
symbol:AT1G72640 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] InterPro:IPR016040 EMBL:CP002684
GO:GO:0000166 Gene3D:3.40.50.720 GO:GO:0009535 EMBL:BT011739
IPI:IPI00533777 RefSeq:NP_177408.3 UniGene:At.35075
ProteinModelPortal:Q6NMC1 SMR:Q6NMC1 PRIDE:Q6NMC1
EnsemblPlants:AT1G72640.1 GeneID:843596 KEGG:ath:AT1G72640
TAIR:At1g72640 HOGENOM:HOG000265886 InParanoid:Q6NMC1 OMA:AFGTYVE
PhylomeDB:Q6NMC1 ProtClustDB:CLSN2681414 Genevestigator:Q6NMC1
Uniprot:Q6NMC1
Length = 312
Score = 100 (40.3 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 489 EDLIRESGIPYTIVRPCALTEEPAGAD-LIFDQGDNITGKISREEVARICVAAL 541
E+ S +PYTI+R L P G+ F G G IS+E+ ARICV AL
Sbjct: 222 ENAAISSNVPYTIIRTGKLENSPGGSQGFNFSAGAAAKGSISKEDAARICVEAL 275
Score = 78 (32.5 bits), Expect = 7.7e-06, Sum P(2) = 7.7e-06
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 149 KGLPVRVLVRNEEKARKMLGPDVDLIVGDITKENTLTPEYFKGVRKVIN 197
KG V+ LV+++ KA + G V+L GD + E L + FKGV VI+
Sbjct: 126 KGTRVKALVKDKRKALEAFGSYVELTTGDASDERFLK-KAFKGVGAVIS 173
>TAIR|locus:2040854 [details] [associations]
symbol:AT2G34460 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISM] [GO:0009941 "chloroplast envelope"
evidence=IDA] [GO:0009507 "chloroplast" evidence=IDA] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010287
"plastoglobule" evidence=IDA] [GO:0009534 "chloroplast thylakoid"
evidence=IDA] [GO:0010264 "myo-inositol hexakisphosphate
biosynthetic process" evidence=RCA] InterPro:IPR016040
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0000166
Gene3D:3.40.50.720 GO:GO:0009941 GO:GO:0009535 GO:GO:0010287
EMBL:AC004077 EMBL:AC004481 eggNOG:COG0702 EMBL:AY034977
EMBL:AY056425 EMBL:BT000884 IPI:IPI00536241 PIR:T02333
RefSeq:NP_565789.2 UniGene:At.48549 UniGene:At.60259
ProteinModelPortal:Q8H124 SMR:Q8H124 IntAct:Q8H124 STRING:Q8H124
PaxDb:Q8H124 PRIDE:Q8H124 EnsemblPlants:AT2G34460.1 GeneID:818009
KEGG:ath:AT2G34460 TAIR:At2g34460 HOGENOM:HOG000262433
InParanoid:Q8H124 OMA:NFRAVEL PhylomeDB:Q8H124 ProtClustDB:PLN00141
Genevestigator:Q8H124 Uniprot:Q8H124
Length = 280
Score = 122 (48.0 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 32/80 (40%), Positives = 43/80 (53%)
Query: 470 PAVRLNKELGFILTFKLKGEDLIRESGIPYTIVRPCALTEEPAGADLIFDQGDNI-TGKI 528
PA G L KL+ E I++SGI YTIVRP L +P +++ + D + G I
Sbjct: 175 PAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGLKNDPPTGNVVMEPEDTLYEGSI 234
Query: 529 SREEVARICVAAL---ESPF 545
SR+ VA + V AL ES F
Sbjct: 235 SRDLVAEVAVEALLQEESSF 254
Score = 47 (21.6 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 146 LRNKGLPVRVLVRNEEKARKML--GPDVDLIVGDITK 180
L ++G V+ VR+ EKA+ P + ++ D+T+
Sbjct: 66 LLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTE 102
>TAIR|locus:2029100 [details] [associations]
symbol:AT1G17350 "AT1G17350" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
"mitochondrion" evidence=ISM;IDA] [GO:0008150 "biological_process"
evidence=ND] [GO:0009736 "cytokinin mediated signaling pathway"
evidence=RCA] EMBL:CP002684 GO:GO:0005739 InterPro:IPR008979
SUPFAM:SSF49785 InterPro:IPR013857 Pfam:PF08547 IPI:IPI00938823
RefSeq:NP_001154347.1 UniGene:At.47021 PRIDE:F4I7I6
EnsemblPlants:AT1G17350.2 GeneID:838307 KEGG:ath:AT1G17350
OMA:IDVEMEM Uniprot:F4I7I6
Length = 236
Score = 113 (44.8 bits), Expect = 0.00080, P = 0.00080
Identities = 35/112 (31%), Positives = 55/112 (49%)
Query: 257 KLLFGFE-ENSLKELPWGALDDVVMGGVSESTFQI-DRTGGENGAPTGLFKGVVST---- 310
K +F F + LK+ W D GG+S ++ +I D+ G+ TG+F G +S
Sbjct: 32 KHIFKFHSKEDLKK--WHLYSDSEYGGLSSASLEIPDK--GDGSDCTGVFSGNLSVDLSE 87
Query: 311 -----ANNGGFTSIRTRNFAEPEDLSAYDGLKLRLKGDGRRYKFVVRTSSDW 357
+ GF +R++ F DL YD + LR++GDGR Y + T + W
Sbjct: 88 GSKWNISRSGFCGMRSKKFDGFIDLDGYDAIALRIRGDGRCYISTIYTEN-W 138
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.137 0.402 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 600 572 0.00080 120 3 11 22 0.43 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 12
No. of states in DFA: 613 (65 KB)
Total size of DFA: 286 KB (2148 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 45.64u 0.42s 46.06t Elapsed: 00:00:02
Total cpu time: 45.64u 0.42s 46.06t Elapsed: 00:00:02
Start: Fri May 10 21:16:17 2013 End: Fri May 10 21:16:19 2013