Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>047194
MGPDSDSASNPNGGWGGRAQGLFVKAAVLIGGAVLLKRLTKSKTRWDHARIVADSLSGEK
FSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRFYMVKPCPKE
LKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRCDRGKRCLYE
GSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFDDDGNQVWGVKAGPYEFKPAPS
SSYSDMFSPLNFPPQQFLEKRIEGSFVLQE

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047194
        (270 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2157398 - symbol:CRL "AT5G51020" species:3702 ...  1100  2.0e-111  1


>TAIR|locus:2157398 [details] [associations]
            symbol:CRL "AT5G51020" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
            "chloroplast" evidence=ISM] [GO:0017009 "protein-phycocyanobilin
            linkage" evidence=IEA] [GO:0009707 "chloroplast outer membrane"
            evidence=IDA] [GO:0043572 "plastid fission" evidence=IMP]
            [GO:0051302 "regulation of cell division" evidence=IMP] [GO:0000302
            "response to reactive oxygen species" evidence=IMP] [GO:0010020
            "chloroplast fission" evidence=IMP] InterPro:IPR010404 Pfam:PF06206
            EMBL:CP002688 GO:GO:0000302 GO:GO:0009707 GO:GO:0010020
            EMBL:AB017063 GO:GO:0051302 GO:GO:0017009 EMBL:AF370196
            EMBL:AY113932 EMBL:AB120415 IPI:IPI00536852 RefSeq:NP_199915.1
            UniGene:At.20990 UniGene:At.49159 STRING:Q9FI46 PRIDE:Q9FI46
            EnsemblPlants:AT5G51020.1 GeneID:835175 KEGG:ath:AT5G51020
            TAIR:At5g51020 InParanoid:Q9FI46 OMA:EGPYEFK PhylomeDB:Q9FI46
            ProtClustDB:CLSN2687210 ArrayExpress:Q9FI46 Genevestigator:Q9FI46
            Uniprot:Q9FI46
        Length = 269

 Score = 1100 (392.3 bits), Expect = 2.0e-111, P = 2.0e-111
 Identities = 206/269 (76%), Positives = 233/269 (86%)

Query:     2 GPDSDSASNPNGGWGGRAQGLFVKAAVLIGGAVLLKRLTKSKTRWDHARIVADSLSGEKF 61
             G D +S+SN   GW  RA+GL VK  VLIGGA+L+KRLTKS TR DHAR+V+ SL+GEKF
Sbjct:     6 GSDPESSSN---GWS-RARGLVVKTLVLIGGALLIKRLTKSTTRRDHARVVSRSLTGEKF 61

Query:    62 SKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRFYMVKPCPKEL 121
             ++EQASRDPDN+FNIRML+CPAAEMVDGS++LYLEQAFWRTPQKPFRQR YMVKPCPKEL
Sbjct:    62 TREQASRDPDNYFNIRMLSCPAAEMVDGSEVLYLEQAFWRTPQKPFRQRLYMVKPCPKEL 121

Query:   122 KCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRCDRGKRCLYEG 181
             KCDVEVSSYAIR+ EEYKNFCDRP+DQRPLPEEVIGDIGEHLTTIHL  CDRGKRCLYEG
Sbjct:   122 KCDVEVSSYAIRDAEEYKNFCDRPKDQRPLPEEVIGDIGEHLTTIHLNCCDRGKRCLYEG 181

Query:   182 STPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFDDDGNQVWGVKAGPYEFKPAPSS 241
             ST PGGFPNSW NGA+Y TS+LAVLKNNEIH WDRGFD++ NQVWG K GPYEFKPA SS
Sbjct:   182 STSPGGFPNSW-NGASYCTSDLAVLKNNEIHLWDRGFDENRNQVWGPKEGPYEFKPATSS 240

Query:   242 SYSDMFSPLNFPPQQFLEKRIEGSFVLQE 270
             S ++  S LN   Q  ++K I+GS +LQ+
Sbjct:   241 SINENLSALNILYQSSIDKPIQGSLILQD 269


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.429    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      270       270   0.00097  114 3  11 22  0.37    34
                                                     32  0.40    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  611 (65 KB)
  Total size of DFA:  228 KB (2124 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  22.44u 0.12s 22.56t   Elapsed:  00:00:02
  Total cpu time:  22.44u 0.12s 22.56t   Elapsed:  00:00:02
  Start:  Fri May 10 21:21:15 2013   End:  Fri May 10 21:21:17 2013

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