BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047194
(270 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B0JGA0|CPXT3_MICAN Chromophore lyase CpcT/CpeT 3 OS=Microcystis aeruginosa (strain
NIES-843) GN=cpcT3 PE=3 SV=1
Length = 202
Score = 85.5 bits (210), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 13/199 (6%)
Query: 39 LTKSKTRWDHARIVADSLSGEKFSKEQASRDPDNFFNIRMLTCPAA-EMVDGSKLLYLEQ 97
LT+S + VA+ L G ++EQA +P ++M TC S LY EQ
Sbjct: 12 LTQSLPLNPQVQGVANHLIGVMDTREQAQTNP-RIAKVQMTTCAVDFSPKQDSIYLYQEQ 70
Query: 98 AFWRTPQKPFRQRFYMVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIG 157
A +P+RQR +++P VE +Y + + NFC++ +R L +
Sbjct: 71 AIIDRLNQPYRQRILVIQPSAD--NSTVESKAYKLNNAPNFINFCNKDLTERELN---VS 125
Query: 158 DIGEHLTTIHLRRCDRGKRCLYEGSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRG 217
D+ E + T+ L+ G Y G TPP G P + + GA T+ + +L + + T DRG
Sbjct: 126 DLAESVCTVFLQPIAGG----YRGETPPQGCPTNAR-GAVKITNTI-ILHSQGMDTSDRG 179
Query: 218 FDDDGNQVWGVKAGPYEFK 236
+D G QVWG + Y+F+
Sbjct: 180 YDSLGQQVWGAQDNVYQFR 198
>sp|Q7NNH3|CPXT1_GLOVI Chromophore lyase CpcT/CpeT 1 OS=Gloeobacter violaceus (strain PCC
7421) GN=cpcT1 PE=3 SV=1
Length = 229
Score = 76.3 bits (186), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 52 VADSLSGEKFSKEQASRD---PDNFFNIRMLTCPAAEMVDGSKLLYL--EQAFWRTPQKP 106
V L+G + +QA D PD +RM TC D SK +YL EQ P
Sbjct: 50 VVTRLTGIMTTTQQAQSDAARPD----VRMTTCSVQLEGDKSKAIYLYQEQTMSNNLGAP 105
Query: 107 FRQRFYMVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPL-PEEVIGDIGEHLTT 165
+RQR + VE + + E + C +P +R + P + GD T
Sbjct: 106 YRQRLLRIAASADGRA--VESAGFKFVEAKPLAGLCAKPAAERLIAPMALDGD-----PT 158
Query: 166 IHLRRCDRGKRCLYEGSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFDDDGNQV 225
+R G + Y G+TP GG ++ + GA T+E+ + K + T DRGFD GNQV
Sbjct: 159 CTVRLVQAGDK--YMGTTPEGGCQSNVR-GAARITNEITLYKEG-MDTRDRGFDAQGNQV 214
Query: 226 WGVKAGPYEFK 236
WG K PY F+
Sbjct: 215 WGAKEEPYRFR 225
>sp|Q8YZ40|CPCTL_NOSS1 Phycocyanobilin lyase CpcT homolog OS=Nostoc sp. (strain PCC 7120 /
UTEX 2576) GN=cpcT2 PE=2 SV=1
Length = 198
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 88/203 (43%), Gaps = 39/203 (19%)
Query: 52 VADSLSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRF 111
+ + L+GE ++EQA +P F ++R+ P D S L+ EQA +P+RQR
Sbjct: 10 LGNYLAGEFDNREQALGEPIWFVHLRLWQRPVDLFSDDSITLFAEQANIVNLDRPYRQRI 69
Query: 112 YMVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEH---LTTIHL 168
+ P P D E Y V+ Y P++ P +IG G H L T+
Sbjct: 70 LRLMPAP-----DSETGLY----VQYYM-----PKN----PSALIG-AGRHPDLLKTLTP 110
Query: 169 RRCDRGKRCLYEGSTPPGGFPNSWQNGA--------TYSTSELAV-------LKNNEIHT 213
++ + C+ S PNS+Q A T+S E V + E+HT
Sbjct: 111 QQLELLPGCVLSVSQQTVA-PNSYQFTASPLPNTCCTFSYLENTVQVSLGFAVTETELHT 169
Query: 214 WDRGFDDD-GNQVWGVKAGPYEF 235
+D+G D + G WG GPY +
Sbjct: 170 YDKGIDQETGKATWGAIVGPYRY 192
>sp|Q2JT26|CPXT2_SYNJA Chromophore lyase CpcT/CpeT 2 OS=Synechococcus sp. (strain
JA-3-3Ab) GN=cpcT2 PE=3 SV=1
Length = 199
Score = 55.8 bits (133), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 88/189 (46%), Gaps = 16/189 (8%)
Query: 52 VADSLSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRF 111
+A L+G+ ++EQA +P F +IR+ P V G Y+EQA+ ++P+RQ
Sbjct: 12 MARWLAGDFSNQEQAWENPPFFASIRVAYRPLPTAVLGGIGFYVEQAYSGHLEEPYRQAV 71
Query: 112 YMVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRC 171
+ ++ + + +Y + + ++ C R R ++ L + D+ +L C
Sbjct: 72 VEL----TQVGDGIVIRNYRPLQPQRWRG-CARGRAEQ-LSQLSAADLA------YLPGC 119
Query: 172 D---RGKRCLYEGSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFDDDGN-QVWG 227
D + + L+ G T PG +NG T L NE + DRG D + QVWG
Sbjct: 120 DVQVKRQGSLFVGVTEPGCRCCVVRNGQTTYLQTTLHLSENEFCSHDRGMDPVTHRQVWG 179
Query: 228 VKAGPYEFK 236
AGP+ F+
Sbjct: 180 AVAGPFRFR 188
>sp|Q2JWI9|CPXT1_SYNJA Chromophore lyase CpcT/CpeT 1 OS=Synechococcus sp. (strain
JA-3-3Ab) GN=cpcT1 PE=3 SV=1
Length = 218
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 81/204 (39%), Gaps = 23/204 (11%)
Query: 53 ADSLSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRFY 112
AD L G ++ QA +P F + + + + EQ TP + +R R
Sbjct: 36 ADWLEGYYSNRAQAMAEPVWFVPVSLWYVRLPHLFSEGIGFFTEQFNEHTPGRFYRSRVL 95
Query: 113 MVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRCD 172
V P + + +Y +R+ + +D + L + + D+ +HL +
Sbjct: 96 QVLADP------LRIENYKLRDQAAWAGAS---QDLQRLAQLSLSDL-QHLPGCRILVEK 145
Query: 173 RGKRCLYEGSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFD-DDGNQVWGVKAG 231
R Y G PGG +TY E L E TWDRGFD G Q WG +AG
Sbjct: 146 RAD--CYHGQMLPGGGCRLNPGDSTYIHIEFD-LTAQEFITWDRGFDATTGQQTWGSRAG 202
Query: 232 PYEFKPAPSSSYSDMFSPLNFPPQ 255
PY ++ P+ FPP+
Sbjct: 203 PYRYQKR---------IPVVFPPR 217
>sp|Q10UX2|CPXT2_TRIEI Chromophore lyase CpcT/CpeT 2 OS=Trichodesmium erythraeum (strain
IMS101) GN=cpcT2 PE=3 SV=1
Length = 195
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 13/176 (7%)
Query: 62 SKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRFYMVKPCPKEL 121
+++QA +P F +IR+ P + LYLEQA+ T +P+R R ++K P E
Sbjct: 20 NQQQAFDNPPLFAHIRVCMRPLPYQLLNGLSLYLEQAYDITLNQPYRVR--VLKLVPSE- 76
Query: 122 KCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRCDRGKRCLYEG 181
+E+ +Y I + E+ P+ + L E I + L GK ++G
Sbjct: 77 -NHIEIENYIIDQEAEFYGASRDPQRLKNLKTEYI----KKLPGCTFITKWTGKS--FKG 129
Query: 182 STPPG-GFPNSWQNGATYSTSELAVLKNNEIHTWDRGFD-DDGNQVWGVKAGPYEF 235
PG G + +TY S + ++ I + D G+D + QVWG AGP+EF
Sbjct: 130 EVEPGKGCTVVREGKSTYLKSYFEINEHKFI-SHDTGYDPETDQQVWGAIAGPFEF 184
>sp|Q2JRQ9|CPXT3_SYNJA Chromophore lyase CpcT/CpeT 3 OS=Synechococcus sp. (strain
JA-3-3Ab) GN=cpcT3 PE=3 SV=1
Length = 198
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/189 (26%), Positives = 79/189 (41%), Gaps = 19/189 (10%)
Query: 52 VADSLSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRF 111
+A ++G + QA +P F NI + CP V Y+EQ + P +P+RQR
Sbjct: 10 LATWMAGHFNNLHQAIAEPVWFANIHVYQCPLPWSVFQGIGFYVEQLYDIYPDQPYRQRV 69
Query: 112 YMVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDI----GEHLTTIH 167
+ P ++ + +YA+ E YK RD L ++ G +
Sbjct: 70 IHLFETPDGIR----IQNYALGSPEAYKC---AGRDLGKLASLAAAELELLPGCAVQVEW 122
Query: 168 LRRCDRGKRCLYEGSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFDDDGNQ-VW 226
C RG+ S P G + TY SE + + H+ D+G D + +Q VW
Sbjct: 123 TGSCYRGR------SVPGKGCIVERKGRTTYLYSEFEI-GADYFHSLDQGRDPETDQVVW 175
Query: 227 GVKAGPYEF 235
G +GP+ F
Sbjct: 176 GSLSGPFRF 184
>sp|P74371|CPXT_SYNY3 Chromophore lyase CpcT/CpeT OS=Synechocystis sp. (strain PCC 6803 /
Kazusa) GN=cpcT PE=3 SV=1
Length = 196
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 19/179 (10%)
Query: 62 SKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRFYMVKPCPKEL 121
++ QA +P + +IR+ P + G +LL+LEQA+ Q+P+R R +K
Sbjct: 20 NQAQAFENPPFYAHIRVAIRPLDQAKFGDRLLFLEQAYDFMLQRPYRLRVLKLKVVEDH- 78
Query: 122 KCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRCDRGKR---CL 178
+E+ ++ +++ E+ F RD L + D L +H CD
Sbjct: 79 ---IEIENFKVKDEEK---FYGAARDLGKLAQLTPAD----LEPMH--GCDMIVEWTGTS 126
Query: 179 YEGSTPPGGFPNSWQNGA-TYSTSELAVLKNNEIHTWDRGFDDDGNQ-VWGVKAGPYEF 235
++G PG ++G TY + V + I + DRG+D + N+ VWG AG + F
Sbjct: 127 FKGEVQPGRQCRVMRDGKETYLENSFEVSETGLI-SLDRGYDPETNERVWGSVAGAFHF 184
>sp|Q7NKE0|CPXT4_GLOVI Chromophore lyase CpcT/CpeT 4 OS=Gloeobacter violaceus (strain PCC
7421) GN=cpcT4 PE=3 SV=1
Length = 183
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 22/191 (11%)
Query: 50 RIVADSLSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQ 109
+ V L+G ++ QA +P F + + A + + EQ TP +P+R
Sbjct: 5 QTVRTWLAGTYSNRAQAMAEPVWFIPVTLWYVEVAGLFGEGAGFFTEQVSEHTPNQPYRS 64
Query: 110 RFYMVKPCPKELKC----DVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTT 165
R + P L+ D +V + A ++ E R D LP T
Sbjct: 65 RVLQLLDNPLRLENYRLKDQKVWAGAAKDPERLGRL--RADDCEQLPG----------CT 112
Query: 166 IHLRRCDRGKRCLYEGSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFD-DDGNQ 224
++L R RG+ + G PGG + A+Y E L T DRGF+ G Q
Sbjct: 113 LYLER--RGE--TFTGKMQPGGGCRLFPGDASYVEIEFE-LGERLFFTLDRGFEATTGEQ 167
Query: 225 VWGVKAGPYEF 235
WG +AG Y +
Sbjct: 168 TWGSRAGAYRY 178
>sp|B0JQ95|CPXT1_MICAN Chromophore lyase CpcT/CpeT 1 OS=Microcystis aeruginosa (strain
NIES-843) GN=cpcT1 PE=3 SV=1
Length = 194
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 50 RIVADSLSGEKFSKEQASRDPDNFFNIRMLTCPAA-EMVDGSKLLYLEQAFWRTPQKPFR 108
+ +A ++ + ++EQA +P F +IR+ P E+++G+ L +LEQA+ P+R
Sbjct: 8 KTLARWMAADFSNQEQAFANPPFFAHIRVCMRPLPDELLNGTSL-FLEQAYDFMLNTPYR 66
Query: 109 QRFYMVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHL 168
R + + +E+ ++ +V+E NF R+ + L + + D+ E + +
Sbjct: 67 LRVFKLSLVDDH----IELENF---KVKEEANFFGASREPQRL-KNLTLDLLEPMLGCDM 118
Query: 169 RRCDRGKRCLYEGSTPPGGFPNSW-QNGATYSTSELAVLKNNEIHTWDRGFDDDGNQ-VW 226
G ++G PG + ++ TY + + + I DRG D + +Q VW
Sbjct: 119 NVTWTGNS--FKGVVKPGKQCLVFRKDRMTYLDNSFEISERGLISV-DRGLDPETDQLVW 175
Query: 227 GVKAGPYEF 235
G AGP+EF
Sbjct: 176 GSIAGPFEF 184
>sp|Q7NLD3|CPXT3_GLOVI Chromophore lyase CpcT/CpeT 3 OS=Gloeobacter violaceus (strain PCC
7421) GN=cpcT3 PE=3 SV=1
Length = 203
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 82/187 (43%), Gaps = 13/187 (6%)
Query: 52 VADSLSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRF 111
+A ++G+ +++QA P F +IR+ P G+ Y EQ + P+RQ
Sbjct: 12 LARWMAGDFSNQKQALAQPQTFAHIRVFFRPLPFAFFGTVGFYSEQTYDYDLWSPYRQGL 71
Query: 112 YMVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRC 171
+ + + + + + +Y +++ Y P +P + + + R
Sbjct: 72 HRLL----DREGGIYIENYGLQDAGLYAGAGHDPEILATIPTDCL-QPRRGCAMVFRREG 126
Query: 172 DRGKRCLYEGSTPPGGFPNSWQNGA-TYSTSELAVLKNNEIHTWDRGFDDDGN-QVWGVK 229
D + GS PG ++G TY SE+ + ++ + + DRG D + + Q+WG +
Sbjct: 127 D-----CFRGSVEPGNHCLIPRDGYWTYLVSEVELTESTWV-SLDRGMDRETHRQIWGSQ 180
Query: 230 AGPYEFK 236
AGP F+
Sbjct: 181 AGPLHFE 187
>sp|B1X536|CPXT_PAUCH Chromophore lyase CpcT/CpeT OS=Paulinella chromatophora GN=cpcT
PE=3 SV=1
Length = 201
Score = 40.8 bits (94), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 14/186 (7%)
Query: 52 VADSLSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRF 111
+ LS +++QA +P + +I + P ++ GS L +EQ++ P KP+R R
Sbjct: 8 LVHQLSARFNNQQQAFDNPPLYAHIVVNCRPLVHLLPGS--LLIEQSYAMDPLKPYRIRV 65
Query: 112 YMVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRC 171
+ ++L + SY++ + ++Y P + E+ + I E I
Sbjct: 66 LRAQTRDEKLI----IFSYSLSDEQKYWGSVYEPERMLKIEEKDLQAI-EGCNYI----- 115
Query: 172 DRGKRCLYEGSTPPGGFPNSWQNGA-TYSTSELAVLKNNEIHTWDRGFDD-DGNQVWGVK 229
R K + G PG + G TY S+ + E+ T DRG + Q+WG
Sbjct: 116 VRKKNSNFIGEVEPGCRCLVDRKGVTTYIVSKFELTNKGEMRTLDRGHNPVTHEQLWGSL 175
Query: 230 AGPYEF 235
G +EF
Sbjct: 176 GGVFEF 181
>sp|Q7NLE2|CPXT2_GLOVI Chromophore lyase CpcT/CpeT 2 OS=Gloeobacter violaceus (strain PCC
7421) GN=cpcT2 PE=3 SV=1
Length = 202
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 76/184 (41%), Gaps = 14/184 (7%)
Query: 56 LSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRFYMVK 115
L+G+ ++EQA P F +IR+ P V LY EQA P+R +
Sbjct: 13 LAGDFSNREQAWDAPAFFSHIRLCMRPLPWQVFEGYGLYSEQADDYDWAHPYRIVVLNLV 72
Query: 116 PCPKELKCDVEVSSYAIREVEEYKNF---CDRPRDQRPLPEEVIGDIGEHLTTIHLRRCD 172
P + +E +YA+++ Y +R R R PE++ G T +R
Sbjct: 73 EQPDGI---IECRNYALKDTAPYLGAAREAERARLHRLTPEQLEPLPG---CTFLFKR-- 124
Query: 173 RGKRCLYEGSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFD-DDGNQVWGVKAG 231
+ L+ G PG ++ G A + + + DRG D + QVWG +G
Sbjct: 125 --EGSLFRGRVRPGKGCRVFRKGRDTYLDGEATVSADYYKSIDRGRDLESDEQVWGSVSG 182
Query: 232 PYEF 235
P+ F
Sbjct: 183 PFHF 186
>sp|Q8DH04|CPXT_THEEB Chromophore lyase CpcT/CpeT OS=Thermosynechococcus elongatus
(strain BP-1) GN=cpcT PE=3 SV=1
Length = 196
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 13/182 (7%)
Query: 56 LSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRFYMVK 115
++ + ++ QA +P + +IR+ P V LY+EQA+ P+R R +
Sbjct: 14 MAADFSNQAQAFENPPFYAHIRVCMRPLPRGVLEGIALYVEQAYDYLLSVPYRTRVLELM 73
Query: 116 PCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRCDRGK 175
P + + +Y ++ + K F RD++ L D+ E L ++ G
Sbjct: 74 PANDH----IVIKNYVLK---DEKRFFGAARDRQRLQAMTADDL-ELLCGCNMLTYWTGH 125
Query: 176 RCLYEGSTPPGGFPNSWQNG-ATYSTSELAVLKNNEIHTWDRGFDDDGNQ-VWGVKAGPY 233
+ G PG + G TY S + + I + DRG D + ++ VWG AGP+
Sbjct: 126 S--FRGEVEPGKACKVVRKGRETYLDSTFEIDGDRFI-SHDRGRDPETDEHVWGSVAGPF 182
Query: 234 EF 235
F
Sbjct: 183 HF 184
>sp|B1XI94|CPCT_SYNP2 Phycocyanobilin lyase CpcT OS=Synechococcus sp. (strain ATCC 27264
/ PCC 7002 / PR-6) GN=cpcT PE=1 SV=1
Length = 199
Score = 38.5 bits (88), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 77/197 (39%), Gaps = 25/197 (12%)
Query: 49 ARIVADSLSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFR 108
A +A ++GE ++ QA +P + +I++ P LYLEQA+ P+R
Sbjct: 7 AHTLARWMAGEFSNEAQALANPPLWAHIKVCMRPLPNQFFDGYGLYLEQAYSSDTSAPYR 66
Query: 109 QRFYMVKPCPKELKC------DVEVSSY--AIREVEEYKNFCDRPRDQRPLPEEVIGDIG 160
R + +KP ++ D + Y A R ++F D P + ++ G
Sbjct: 67 LRLFHIKPVDDHMELVHYKPKDDAKTKYMGAARNPAMMQHFDMADLDPMPGCDMIVTWSG 126
Query: 161 EHLTTIHLRRCDRGKRCLYEGSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFDD 220
GK C NS++ + +N + + DRG D
Sbjct: 127 TSFKGT----VQAGKGCRVVRYNKESYLDNSFE------------ITDNALISIDRGRDP 170
Query: 221 DGNQV-WGVKAGPYEFK 236
N++ WG AG +EF+
Sbjct: 171 VTNEILWGSLAGAFEFE 187
>sp|A2C0E4|CPXT_PROM1 Chromophore lyase CpcT/CpeT OS=Prochlorococcus marinus (strain
NATL1A) GN=cpcT PE=3 SV=1
Length = 199
Score = 35.8 bits (81), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 83/208 (39%), Gaps = 36/208 (17%)
Query: 41 KSKTRWDHARIVADSLSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFW 100
K K + A+IV+ S +KEQA +P F +I++ P Y EQ +
Sbjct: 2 KKKPTLEFAKIVSGVFS----NKEQALNNPKKFAHIQIHIRPLFFKTYNCFAFYSEQRYQ 57
Query: 101 RTPQKPFRQRFYMVKPCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIG 160
P+RQ +L + E+ ++ ++E+ + F D L +
Sbjct: 58 HDIWNPYRQSI-------NKLSQEEEIFIFSNYKIEDKERFTGGALDISLLDK------- 103
Query: 161 EHLTTIHLRRCDRGKRC-LYEGSTPPGGFPNSWQNGA----------TYSTSELAVLKNN 209
I + + C +Y T PG F + ++G TY S++ V KN
Sbjct: 104 -----ISKYKLYKKPGCSMYFKETNPGNFLGTIESGCKCFIEYGSDKTYVKSKVTVNKNI 158
Query: 210 EIHTWDRGFD-DDGNQVWGVKAGPYEFK 236
I + D G+ + +VWG + GP FK
Sbjct: 159 LI-SEDSGYAIETDKKVWGSEFGPLIFK 185
>sp|B0JRV5|CPXT2_MICAN Chromophore lyase CpcT/CpeT 2 OS=Microcystis aeruginosa (strain
NIES-843) GN=cpcT2 PE=3 SV=1
Length = 200
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/182 (19%), Positives = 75/182 (41%), Gaps = 5/182 (2%)
Query: 56 LSGEKFSKEQASRDPDNFFNIRMLTCPAAEMVDGSKLLYLEQAFWRTPQKPFRQRFYMVK 115
L+GE ++ QA +P + ++R+ P + S L+ EQA +P+R R + +
Sbjct: 12 LAGEFENQRQAQAEPVWYVHLRLWLRPLPLFREDSIALFAEQASIINLDQPYRPRLWRLT 71
Query: 116 PCPKELKCDVEVSSYAIREVEEYKNFCDRPRDQRPLPEEVIGDIGEHLTTIHLRRCDRGK 175
+EV Y +++ + P R + E + + + + +
Sbjct: 72 HSES---GGLEVRHYMFNDLKSVQGAGKNPDILRKISLEDLTFLPTCTLAVKVNTLADNQ 128
Query: 176 RCLYEGSTPPGGFPNSWQNGATYSTSELAVLKNNEIHTWDRGFD-DDGNQVWGVKAGPYE 234
P +++ G TY + + ++ + T+D+G D G +WG GPY+
Sbjct: 129 YQFIAQPQPEQRCQFTYE-GTTYQVALGFEVTSHSLKTYDKGLDPGTGKGIWGALLGPYQ 187
Query: 235 FK 236
++
Sbjct: 188 YE 189
>sp|P53331|REXO1_YEAST RNA exonuclease 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=RNH70 PE=1 SV=1
Length = 553
Score = 32.0 bits (71), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 14/66 (21%)
Query: 121 LKCDVEVSSYAIREVEEYKNFCDRPRDQRPL--PEEVIGDIGEHLTTIHLRRCDRGKRCL 178
L DV++ I+ +E +N+ +PR + P V+ DIG+HLT L
Sbjct: 440 LNKDVKLIVGRIKNLERSRNYNKKPRKETPSFDASMVLHDIGQHLTQ------------L 487
Query: 179 YEGSTP 184
YE +TP
Sbjct: 488 YENATP 493
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,475,935
Number of Sequences: 539616
Number of extensions: 5353611
Number of successful extensions: 9369
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 9347
Number of HSP's gapped (non-prelim): 20
length of query: 270
length of database: 191,569,459
effective HSP length: 116
effective length of query: 154
effective length of database: 128,974,003
effective search space: 19861996462
effective search space used: 19861996462
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)