BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047196
(827 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 152 bits (383), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 157/541 (29%), Positives = 239/541 (44%), Gaps = 84/541 (15%)
Query: 140 PSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKV 199
P + L+ LD S N+LSG S + + + + S++ G +P L YL
Sbjct: 214 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLS- 272
Query: 200 LFLAKNMFHGQIPLALS-KCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGE 258
LA+N F G+IP LS C L L+L GA+P + ++L ++L +N GE
Sbjct: 273 --LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 330
Query: 259 IPHE-IGYLPXXXXXXXXXXXXXXXXPAAIFNMS-TVKKIYLLDNSLLGSFSLGIDLSLP 316
+P + + + P ++ N+S ++ + L N+ G LP
Sbjct: 331 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI-------LP 383
Query: 317 NV--------ERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIG------- 361
N+ + L L N F+G IP ++N S+LV L + N SG IP+++G
Sbjct: 384 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 443
Query: 362 --LTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQXXXXXXXXXXXXXEGNKLTGS 419
L N L+G +P + + +LE + + ++ G IP N+LTG
Sbjct: 444 LKLWLNMLEGEIPQELMYVK-TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 502
Query: 420 IPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCL------- 472
IP GRL+ L L L N +G+IP +L L L L N F+G+IP+ +
Sbjct: 503 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 562
Query: 473 -------------------------GNL---TSLRSPDLGSNRLTSVLPS---------- 494
GNL +RS L NRL++ P
Sbjct: 563 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--NRLSTRNPCNITSRVYGGH 620
Query: 495 ---TFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQ 551
TF N ++F D+S N L G + +IG++ + +NL N+ SG IP +GDL+ L
Sbjct: 621 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 680
Query: 552 NISLACNGLEGLIPESFG---YLTELNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCGL 608
+ L+ N L+G IP++ LTE++LS N L G IP G F F F+ N LCG
Sbjct: 681 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 740
Query: 609 P 609
P
Sbjct: 741 P 741
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 202/427 (47%), Gaps = 45/427 (10%)
Query: 145 MHKLKFLDFSDNQLSGSLSSVTFNLS----SVLDIRLDSDKLSGELPVNICNYLHYLKV- 199
++ L+ LD S N +SG+ + V + LS + + + +K+SG++ V+ C L +L V
Sbjct: 147 LNSLEVLDLSANSISGA-NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVS 205
Query: 200 -------------------LFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEIS 240
L ++ N G A+S C L+LLN+ + G IP
Sbjct: 206 SNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP- 264
Query: 241 NLTILRKISLRNNKLRGEIPHEI-GYLPXXXXXXXXXXXXXXXXPAAIFNMSTVKKIYLL 299
L L+ +SL NK GEIP + G P + S ++ + L
Sbjct: 265 -LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 323
Query: 300 DNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITN-ASKLVYLDMGTNSFSG-IIP 357
N+ G + L + ++ L+L N FSG +P +TN ++ L+ LD+ +N+FSG I+P
Sbjct: 324 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILP 383
Query: 358 NTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQXXXXXXXXXXXXXEGNKLT 417
N L NP + +L+ +Y+ N G IP N L+
Sbjct: 384 N---LCQNPKN------------TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLS 428
Query: 418 GSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTS 477
G+IP + G L KL+ L L N L G IP +L ++ L TL L N +G IPS L N T+
Sbjct: 429 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 488
Query: 478 LRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFS 537
L L +NRLT +P L+++ LS+NS G + ++G+ R +I ++L+ N F+
Sbjct: 489 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 548
Query: 538 GDIPSTI 544
G IP+ +
Sbjct: 549 GTIPAAM 555
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 152 bits (383), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 157/541 (29%), Positives = 239/541 (44%), Gaps = 84/541 (15%)
Query: 140 PSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKV 199
P + L+ LD S N+LSG S + + + + S++ G +P L YL
Sbjct: 217 PFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLS- 275
Query: 200 LFLAKNMFHGQIPLALS-KCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGE 258
LA+N F G+IP LS C L L+L GA+P + ++L ++L +N GE
Sbjct: 276 --LAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGE 333
Query: 259 IPHE-IGYLPXXXXXXXXXXXXXXXXPAAIFNMS-TVKKIYLLDNSLLGSFSLGIDLSLP 316
+P + + + P ++ N+S ++ + L N+ G LP
Sbjct: 334 LPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPI-------LP 386
Query: 317 NV--------ERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIG------- 361
N+ + L L N F+G IP ++N S+LV L + N SG IP+++G
Sbjct: 387 NLCQNPKNTLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRD 446
Query: 362 --LTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQXXXXXXXXXXXXXEGNKLTGS 419
L N L+G +P + + +LE + + ++ G IP N+LTG
Sbjct: 447 LKLWLNMLEGEIPQELMYVK-TLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGE 505
Query: 420 IPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCL------- 472
IP GRL+ L L L N +G+IP +L L L L N F+G+IP+ +
Sbjct: 506 IPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKI 565
Query: 473 -------------------------GNL---TSLRSPDLGSNRLTSVLPS---------- 494
GNL +RS L NRL++ P
Sbjct: 566 AANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQL--NRLSTRNPCNITSRVYGGH 623
Query: 495 ---TFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQ 551
TF N ++F D+S N L G + +IG++ + +NL N+ SG IP +GDL+ L
Sbjct: 624 TSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLN 683
Query: 552 NISLACNGLEGLIPESFG---YLTELNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCGL 608
+ L+ N L+G IP++ LTE++LS N L G IP G F F F+ N LCG
Sbjct: 684 ILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGY 743
Query: 609 P 609
P
Sbjct: 744 P 744
Score = 139 bits (351), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 127/427 (29%), Positives = 202/427 (47%), Gaps = 45/427 (10%)
Query: 145 MHKLKFLDFSDNQLSGSLSSVTFNLS----SVLDIRLDSDKLSGELPVNICNYLHYLKV- 199
++ L+ LD S N +SG+ + V + LS + + + +K+SG++ V+ C L +L V
Sbjct: 150 LNSLEVLDLSANSISGA-NVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVS 208
Query: 200 -------------------LFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEIS 240
L ++ N G A+S C L+LLN+ + G IP
Sbjct: 209 SNNFSTGIPFLGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPLP- 267
Query: 241 NLTILRKISLRNNKLRGEIPHEI-GYLPXXXXXXXXXXXXXXXXPAAIFNMSTVKKIYLL 299
L L+ +SL NK GEIP + G P + S ++ + L
Sbjct: 268 -LKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALS 326
Query: 300 DNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITN-ASKLVYLDMGTNSFSG-IIP 357
N+ G + L + ++ L+L N FSG +P +TN ++ L+ LD+ +N+FSG I+P
Sbjct: 327 SNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILP 386
Query: 358 NTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQXXXXXXXXXXXXXEGNKLT 417
N L NP + +L+ +Y+ N G IP N L+
Sbjct: 387 N---LCQNPKN------------TLQELYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLS 431
Query: 418 GSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTS 477
G+IP + G L KL+ L L N L G IP +L ++ L TL L N +G IPS L N T+
Sbjct: 432 GTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTN 491
Query: 478 LRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFS 537
L L +NRLT +P L+++ LS+NS G + ++G+ R +I ++L+ N F+
Sbjct: 492 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFN 551
Query: 538 GDIPSTI 544
G IP+ +
Sbjct: 552 GTIPAAM 558
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 112/224 (50%), Gaps = 30/224 (13%)
Query: 414 NKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA------------- 460
N L G IP +L +L LY+ ++G+IPD L + L TL +
Sbjct: 87 NNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSIS 146
Query: 461 -----------GNKFSGSIPSCLGNLTSL-RSPDLGSNRLTSVLPSTFWNLKDILFFDLS 508
GN+ SG+IP G+ + L S + NRLT +P TF NL ++ F DLS
Sbjct: 147 SLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLS 205
Query: 509 SNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPE-- 566
N L+G S+ G+ + I+L++N+ + D+ +G K+L + L N + G +P+
Sbjct: 206 RNMLEGDASVLFGSDKNTQKIHLAKNSLAFDL-GKVGLSKNLNGLDLRNNRIYGTLPQGL 264
Query: 567 -SFGYLTELNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCGLP 609
+L LN+SFN L GEIP+GG F ++ N+ LCG P
Sbjct: 265 TQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 131/332 (39%), Gaps = 83/332 (25%)
Query: 56 DQQALLALKAHISYDPTNLLAQNSTSNTSVCNWIGITCNVNS--HRVTALNISSLNLQ-- 111
D+QALL +K + +PT L + T++ W+G+ C+ ++ +RV L++S LNL
Sbjct: 7 DKQALLQIKKDLG-NPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKP 65
Query: 112 -------------------------GTIPPQXXXXXXXXXXXXXXXXXXGDIPPSIFTMH 146
G IPP G IP + +
Sbjct: 66 YPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIK 125
Query: 147 KLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNM 206
L LDFS N LSG+L +L +++ I D +++SG +P + ++ + +++N
Sbjct: 126 TLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNR 185
Query: 207 FHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYL 266
G+IP + LNL F + L N L G+ G
Sbjct: 186 LTGKIPPTFAN------LNLAF-------------------VDLSRNMLEGDASVLFG-- 218
Query: 267 PXXXXXXXXXXXXXXXXPAAIFNMSTVKKIYLLDNSLLGSFSLG-IDLSLPNVERLNLGL 325
+ +KI+L NSL +F LG + LS N+ L+L
Sbjct: 219 ----------------------SDKNTQKIHLAKNSL--AFDLGKVGLS-KNLNGLDLRN 253
Query: 326 NRFSGTIPSFITNASKLVYLDMGTNSFSGIIP 357
NR GT+P +T L L++ N+ G IP
Sbjct: 254 NRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP 285
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 75/160 (46%), Gaps = 9/160 (5%)
Query: 442 GSIPDQLCHLARLNTLGLAGNKFSGS--IPSCLGNLTSLRSPDLGS-NRLTSVLPSTFWN 498
G + D R+N L L+G IPS L NL L +G N L +P
Sbjct: 40 GVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAK 99
Query: 499 LKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACN 558
L + + ++ ++ G + + ++ ++ ++ S N SG +P +I L +L I+ N
Sbjct: 100 LTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159
Query: 559 GLEGLIPESFG----YLTELNLSFNKLEGEIPRGGPFANF 594
+ G IP+S+G T + +S N+L G+IP FAN
Sbjct: 160 RISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPT--FANL 197
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 112/289 (38%), Gaps = 47/289 (16%)
Query: 186 LPVNICNYLHYLKVLFLAK-NMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTI 244
+P ++ N L YL L++ N G IP A++K +L L + +SGAIP +S +
Sbjct: 68 IPSSLAN-LPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 245 LRKISLRNNKLRGEIPHEIGYLPXXXXXXXXXXXXXXXXPAAIFNMSTVKKIYLLDNSLL 304
L + N L G +P I LP P +
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY----------------- 169
Query: 305 GSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTG 364
GSFS + + NR +G IP N + L ++D+ N G G
Sbjct: 170 GSFSKLF-------TSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDK 221
Query: 365 NPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQXXXXXXXXXXXXXEGNKLTGSIPVTF 424
N L + +L+ L + +S N+ G N++ G++P
Sbjct: 222 NTQKIHL--AKNSLAFDLGKVGLSK-NLNG--------------LDLRNNRIYGTLPQGL 264
Query: 425 GRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNK-FSGS-IPSC 471
+L+ L L + FN L G IP Q +L R + A NK GS +P+C
Sbjct: 265 TQLKFLHSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNKCLCGSPLPAC 312
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 86/192 (44%), Gaps = 25/192 (13%)
Query: 661 TLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALK-SFE 719
L+RFS ++L A++ FS +N++G G FG VYKGRL DG VA+K + + F+
Sbjct: 24 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQ 83
Query: 720 AECEVMKNIRHRNHVKRISSCSNEDFKAL-----------DCLHSTNCS---LNIFDKLN 765
E E++ HRN ++ C + L CL S L+ +
Sbjct: 84 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 143
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET 815
I + A L YLH +IH D+K N+ DFG+ +L+ +
Sbjct: 144 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 203
Query: 816 LVTIGYMAPGLL 827
TIG++AP L
Sbjct: 204 RGTIGHIAPEYL 215
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 84/192 (43%), Gaps = 25/192 (13%)
Query: 661 TLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALK-SFE 719
L+RFS ++L A++ F +N++G G FG VYKGRL DG VA+K + + F+
Sbjct: 16 QLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQ 75
Query: 720 AECEVMKNIRHRNHVKRISSCSNEDFKAL-----------DCLHSTNCS---LNIFDKLN 765
E E++ HRN ++ C + L CL S L+ +
Sbjct: 76 TEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQR 135
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET 815
I + A L YLH +IH D+K N+ DFG+ +L+ +
Sbjct: 136 IALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAV 195
Query: 816 LVTIGYMAPGLL 827
IG++AP L
Sbjct: 196 RGXIGHIAPEYL 207
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 186
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 137
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 182
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 140
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 141 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 185
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL IH D
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 149
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 150 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 194
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYL---EKKNFIHRD 138
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 183
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 137
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 138 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 182
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G FG VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N ++ L + ++SA+EYL + IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 179
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 138
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 139 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAP 183
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRN 340
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 341 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 385
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N ++ L + ++SA+EYL + IH D
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAP 179
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N ++ L + ++SA+EYL + IH D
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 141
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 142 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 186
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N ++ L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRN 382
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 383 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 427
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N ++ L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N ++ L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N ++ L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N +N L + ++SA+EYL + IH D
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRD 136
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 137 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 181
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/182 (30%), Positives = 81/182 (44%), Gaps = 31/182 (17%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHD-GIEVAIKVFHQ--NCAMALKSFEAECEVMKN 727
F++ EK+ L+G GS+G V K R D G VAIK F + + M K E +++K
Sbjct: 21 FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQ 80
Query: 728 IRHRNHVKRISSCSNED-----FKALDCLHSTNCSLNIFDKLNIMIDVASALEYLH---- 778
+RH N V + C + F+ +D H+ L +F +D +YL
Sbjct: 81 LRHENLVNLLEVCKKKKRWYLVFEFVD--HTILDDLELFPN---GLDYQVVQKYLFQIIN 135
Query: 779 ---FSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPG 825
F HS +IH D+KP+N+ DFG R L + E + T Y AP
Sbjct: 136 GIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDE-VATRWYRAPE 194
Query: 826 LL 827
LL
Sbjct: 195 LL 196
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N ++ L + ++SA+EYL + IH D
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRD 134
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 135 LAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAP 179
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 77/170 (45%), Gaps = 28/170 (16%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSC 740
IG GSFG+V++ H G +VA+K+ + A + F E +MK +RH N V + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 741 SNEDFKAL-----------DCLHSTNC--SLNIFDKLNIMIDVASALEYLHFSHSTPVIH 787
+ ++ LH + L+ +L++ DVA + YLH + + P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 788 CDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
DLK N V DFG+ R L + T +MAP +L
Sbjct: 163 RDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKXAAGTPEWMAPEVL 211
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG GSFG+VYKG+ H + V I ++F E V++ RH N + + +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 743 EDFKALD--C--------LHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
++ + C LH +F ++I A ++YL H+ +IH D+K
Sbjct: 104 DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYL---HAKNIIHRDMKS 160
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + + Q E ++ +MAP ++
Sbjct: 161 NNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVI 206
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 27/165 (16%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G +G VY+G + VA+K ++ M ++ F E VMK I+H N V+ + C+
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 742 NE-------DFKA----LDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
E +F LD L N ++ L + ++SA+EYL + IH +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN---FIHRN 343
Query: 790 LKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L +N V DFG+ RL+TGD I + AP
Sbjct: 344 LAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAP 388
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 658 KSKTL-RRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALK 716
+ KTL RR S D + + IG GSFG+VYKG+ H + V + L+
Sbjct: 18 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ 77
Query: 717 SFEAECEVMKNIRHRNHVKRISSCSN----------EDFKALDCLHSTNCSLNIFDKLNI 766
+F+ E V++ RH N + + + E LH + ++I
Sbjct: 78 AFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 137
Query: 767 MIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETL 816
A ++YL H+ +IH DLK N+F DFG+ + + Q E L
Sbjct: 138 ARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 194
Query: 817 V-TIGYMAPGLL 827
+I +MAP ++
Sbjct: 195 SGSILWMAPEVI 206
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVF-------HQNCAMALKSFEAECEV 724
A + E IG G FG V+KGRL D VAIK + F+ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 725 MKNIRHRNHVK-------------RISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVA 771
M N+ H N VK C + + LD H S+ KL +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSV----KLRLMLDIA 132
Query: 772 SALEYLHFSHSTPVIHCDLKPKNVF 796
+EY+ + + P++H DL+ N+F
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIF 156
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 79/181 (43%), Gaps = 28/181 (15%)
Query: 669 DLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNI 728
DL AT F + LIG G FG VYKG L DG +VA+K + ++ FE E E +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTN--------------CSLNIFDKLNIMIDVASAL 774
RH + V I C + L + N S++ +L I I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 775 EYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG-DRSMIQTETLVTIGYMA 823
YL H+ +IH D+K N+ DFGI + T D++ + T+GY+
Sbjct: 153 HYL---HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYID 209
Query: 824 P 824
P
Sbjct: 210 P 210
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVF-------HQNCAMALKSFEAECEV 724
A + E IG G FG V+KGRL D VAIK + F+ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 725 MKNIRHRNHVK-------------RISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVA 771
M N+ H N VK C + + LD H S+ KL +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSV----KLRLMLDIA 132
Query: 772 SALEYLHFSHSTPVIHCDLKPKNVF 796
+EY+ + + P++H DL+ N+F
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIF 156
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 63/145 (43%), Gaps = 26/145 (17%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVF-------HQNCAMALKSFEAECEV 724
A + E IG G FG V+KGRL D VAIK + F+ E +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 725 MKNIRHRNHVK-------------RISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVA 771
M N+ H N VK C + + LD H S+ KL +M+D+A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEFVPCGDLYHRLLDKAHPIKWSV----KLRLMLDIA 132
Query: 772 SALEYLHFSHSTPVIHCDLKPKNVF 796
+EY+ + + P++H DL+ N+F
Sbjct: 133 LGIEYMQ-NQNPPIVHRDLRSPNIF 156
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 81/192 (42%), Gaps = 25/192 (13%)
Query: 658 KSKTL-RRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALK 716
+ KTL RR S D + + IG GSFG+VYKG+ H + V + L+
Sbjct: 17 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ 76
Query: 717 SFEAECEVMKNIRHRNHVKRISSCSN----------EDFKALDCLHSTNCSLNIFDKLNI 766
+F+ E V++ RH N + + + E LH + ++I
Sbjct: 77 AFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 136
Query: 767 MIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETL 816
A ++YL H+ +IH DLK N+F DFG+ + + Q E L
Sbjct: 137 ARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 193
Query: 817 V-TIGYMAPGLL 827
+I +MAP ++
Sbjct: 194 SGSILWMAPEVI 205
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG GSFG+VYKG+ H + V + L++F+ E V++ RH N + + +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 79
Query: 743 ----------EDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
E LH++ + ++I A ++YL H+ +IH DLK
Sbjct: 80 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRDLKS 136
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + + Q E L +I +MAP ++
Sbjct: 137 NNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 182
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG GSFG+VYKG+ H + V + L++F+ E V++ RH N + + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 743 ----------EDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
E LH + ++I A ++YL H+ +IH DLK
Sbjct: 81 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLKS 137
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + + Q E L +I +MAP ++
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG GSFG+VYKG+ H + V + L++F+ E V++ RH N + + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 743 EDFKALD--C--------LHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
+ C LH + ++I A ++YL H+ +IH DLK
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLKS 132
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + + Q E L +I +MAP ++
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 65/159 (40%), Gaps = 27/159 (16%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E+ LIG G FG VY GR H + + + ++ LK+F+ E + RH N V
Sbjct: 33 EQLEIGELIGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVV 92
Query: 735 KRISSCSNEDFKAL-----------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
+ +C + A+ + L++ I ++ + YL H+
Sbjct: 93 LFMGACMSPPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYL---HAK 149
Query: 784 PVIHCDLKPKNVF---------DFGI----GRLLTGDRS 809
++H DLK KNVF DFG+ G L G R
Sbjct: 150 GILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRRE 188
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG GSFG+VYKG+ H + V + L++F+ E V++ RH N + + +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 77
Query: 743 ----------EDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
E LH + ++I A ++YL H+ +IH DLK
Sbjct: 78 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLKS 134
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + + Q E L +I +MAP ++
Sbjct: 135 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 180
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 81/171 (47%), Gaps = 30/171 (17%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSC 740
IG GSFG+V++ H G +VA+K+ + A + F E +MK +RH N V + +
Sbjct: 45 IGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 741 SNEDFKAL-----------DCLHSTNC--SLNIFDKLNIMIDVASALEYLHFSHSTPVIH 787
+ ++ LH + L+ +L++ DVA + YLH + + P++H
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIVH 162
Query: 788 CDLKPKN----------VFDFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+LK N V DFG+ RL + + +++ T +MAP +L
Sbjct: 163 RNLKSPNLLVDKKYTVKVCDFGLSRLKAS--TFLSSKSAAGTPEWMAPEVL 211
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG GSFG+VYKG+ H + V + L++F+ E V++ RH N + + +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 80
Query: 743 ----------EDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
E LH + ++I A ++YL H+ +IH DLK
Sbjct: 81 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLKS 137
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + + Q E L +I +MAP ++
Sbjct: 138 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 183
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV-------- 734
IG GSFG+VYKG+ H + V + L++F+ E V++ RH N +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 75
Query: 735 --KRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
I + E LH + ++I A ++YL H+ +IH DLK
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLKS 132
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + + Q E L +I +MAP ++
Sbjct: 133 NNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 25/192 (13%)
Query: 658 KSKTL-RRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALK 716
+ KTL RR S D + + IG GSFG+VYKG+ H + V + L+
Sbjct: 18 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ 77
Query: 717 SFEAECEVMKNIRHRNHVKRISSCSN----------EDFKALDCLHSTNCSLNIFDKLNI 766
+F+ E V++ RH N + + + E LH + ++I
Sbjct: 78 AFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 137
Query: 767 MIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETL 816
A ++YL H+ +IH DLK N+F DFG+ + Q E L
Sbjct: 138 ARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 194
Query: 817 V-TIGYMAPGLL 827
+I +MAP ++
Sbjct: 195 SGSILWMAPEVI 206
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 80/192 (41%), Gaps = 25/192 (13%)
Query: 658 KSKTL-RRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALK 716
+ KTL RR S D + + IG GSFG+VYKG+ H + V + L+
Sbjct: 10 RMKTLGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQ 69
Query: 717 SFEAECEVMKNIRHRNHVKRISSCSN----------EDFKALDCLHSTNCSLNIFDKLNI 766
+F+ E V++ RH N + + + E LH + ++I
Sbjct: 70 AFKNEVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDI 129
Query: 767 MIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETL 816
A ++YL H+ +IH DLK N+F DFG+ + Q E L
Sbjct: 130 ARQTAQGMDYL---HAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 817 V-TIGYMAPGLL 827
+I +MAP ++
Sbjct: 187 SGSILWMAPEVI 198
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG GSFG+VYKG+ H + V + L++F+ E V++ RH N + + +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 91
Query: 743 ----------EDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
E LH++ + ++I A ++YL H+ +IH DLK
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRDLKS 148
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + Q E L +I +MAP ++
Sbjct: 149 NNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 671 FRATEKFSKENL-------IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAEC 722
F++ +K+ E +G G +G VY G + VA+K ++ M ++ F E
Sbjct: 21 FQSMDKWEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKED-TMEVEEFLKEA 79
Query: 723 EVMKNIRHRNHVKRISSCSNE-------DFKA----LDCLHSTNC-SLNIFDKLNIMIDV 770
VMK I+H N V+ + C+ E ++ LD L N + L + +
Sbjct: 80 AVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQI 139
Query: 771 ASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIG 820
+SA+EYL + IH DL +N V DFG+ RL+TGD I
Sbjct: 140 SSAMEYLEKKN---FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIK 196
Query: 821 YMAP 824
+ AP
Sbjct: 197 WTAP 200
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 84/189 (44%), Gaps = 22/189 (11%)
Query: 656 GGKSKTLRRFSYQDLFRA-TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMA 714
G +++ ++ ++D + E +G G FG V+ G + +VA+K Q +M+
Sbjct: 1 GSQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMS 59
Query: 715 LKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK--------LNI 766
+F AE +MK ++H+ V+ + + E + + N SL F K +N
Sbjct: 60 PDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYII-TEYMENGSLVDFLKTPSGIKLTINK 118
Query: 767 MIDVASAL-EYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET 815
++D+A+ + E + F IH DL+ N+ DFG+ RL+ + +
Sbjct: 119 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGA 178
Query: 816 LVTIGYMAP 824
I + AP
Sbjct: 179 KFPIKWTAP 187
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG GSFG+VYKG+ H + V + L++F+ E V++ RH N + + +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTK 75
Query: 743 ----------EDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
E LH + ++I A ++YL H+ +IH DLK
Sbjct: 76 PQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYL---HAKSIIHRDLKS 132
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + Q E L +I +MAP ++
Sbjct: 133 NNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 178
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 24/166 (14%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV-------- 734
IG GSFG+VYKG+ H + V + L++F+ E V++ RH N +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTA 91
Query: 735 --KRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
I + E LH++ + ++I A ++YL H+ +IH DLK
Sbjct: 92 PQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYL---HAKSIIHRDLKS 148
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+F DFG+ + Q E L +I +MAP ++
Sbjct: 149 NNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVI 194
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 78/181 (43%), Gaps = 28/181 (15%)
Query: 669 DLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNI 728
DL AT F + LIG G FG VYKG L DG +VA+K + ++ FE E E +
Sbjct: 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFC 92
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTN--------------CSLNIFDKLNIMIDVASAL 774
RH + V I C + L + N S++ +L I I A L
Sbjct: 93 RHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152
Query: 775 EYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG-DRSMIQTETLVTIGYMA 823
YL H+ +IH D+K N+ DFGI + T ++ + T+GY+
Sbjct: 153 HYL---HTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYID 209
Query: 824 P 824
P
Sbjct: 210 P 210
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 89 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 147
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 148 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 188
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 86 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 144
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 145 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 185
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 80 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 76
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S C L+ +L ++D+A+ + + + +
Sbjct: 77 QLYAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 85
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 86 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 144
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 145 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 185
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 89
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 90 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 148
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 149 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 189
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 84
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 85 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 143
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 144 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 184
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 76
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S C L+ +L ++D+A+ + + + +
Sbjct: 77 QLYAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHD-GIEVAIKVF--HQNCAMALKSFEAECEVMKNIRHR 731
EK+ K IG GS+G V+K R D G VAIK F ++ + K E ++K ++H
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMID-------VASALEYLHFSHSTP 784
N V + + L + + L+ D+ + L+ ++F H
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN 122
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
IH D+KP+N+ DFG RLLTG E + T Y +P LL
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE-VATRWYRSPELL 174
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 680 ENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISS 739
E +G G FG V+ + +VA+K + +M++++F AE VMK ++H VK +
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 251
Query: 740 CSNE------DFKA----LDCLHSTNCSLNIFDKLNIMIDVASAL-EYLHFSHSTPVIHC 788
+ E +F A LD L S S KL ID ++ + E + F IH
Sbjct: 252 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQRNYIHR 308
Query: 789 DLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
DL+ N+ DFG+ R++ + + I + AP
Sbjct: 309 DLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 354
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 43/187 (22%)
Query: 677 FSKENLIGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAEC---EVMKNIRHRN 732
+ + +G G FG V + D G +VAIK Q ++ K+ E C ++MK + H N
Sbjct: 17 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPN 74
Query: 733 HVKR-------------------ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASA 773
V + C D + C L ++ D++SA
Sbjct: 75 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 134
Query: 774 LEYLHFSHSTPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETLVTIG 820
L YLH + +IH DLKP+N + D G + L D+ + TE + T+
Sbjct: 135 LRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 189
Query: 821 YMAPGLL 827
Y+AP LL
Sbjct: 190 YLAPELL 196
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK IRH V
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKIRHEKLV 76
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 77 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 43/187 (22%)
Query: 677 FSKENLIGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAEC---EVMKNIRHRN 732
+ + +G G FG V + D G +VAIK Q ++ K+ E C ++MK + H N
Sbjct: 16 WEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE--LSPKNRERWCLEIQIMKKLNHPN 73
Query: 733 HVKR-------------------ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASA 773
V + C D + C L ++ D++SA
Sbjct: 74 VVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSA 133
Query: 774 LEYLHFSHSTPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETLVTIG 820
L YLH + +IH DLKP+N + D G + L D+ + TE + T+
Sbjct: 134 LRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGELCTEFVGTLQ 188
Query: 821 YMAPGLL 827
Y+AP LL
Sbjct: 189 YLAPELL 195
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 49.7 bits (117), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 185 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-NMSPEAFLQEAQVMKKLRHEKLV 243
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 244 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 303
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+GRL+ + + I + AP
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAP 351
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 49.7 bits (117), Expect = 7e-06, Method: Composition-based stats.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 682 LIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
++G G++G VY GR L + + +AIK + + + E + K+++H+N V+ + S
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 74
Query: 741 SNEDFKALDCLHSTNCSLNIF----------DKLNIMIDVASALEYLHFSHSTPVIHCDL 790
S F + SL+ ++ I LE L + H ++H D+
Sbjct: 75 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 134
Query: 791 KPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
K NV DFG + L G +T T T+ YMAP ++
Sbjct: 135 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEII 181
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 8 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 66
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 67 QLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 126
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAP 174
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
F KE +G G FG V G+ +VAIK+ + +M+ F E +VM N+ H V+
Sbjct: 28 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 737 ISSCSNE-------DFKALDC----LHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPV 785
C+ + ++ A C L L + DV A+EYL S
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQF 141
Query: 786 IHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
+H DL +N V DFG+ R + D + + + P +L
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVL 193
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 80 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 179
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 81 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 139
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 140 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 180
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 49.3 bits (116), Expect = 8e-06, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 82 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 140
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 141 NILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAP 181
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 70 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 177
Query: 823 APGLL 827
AP +L
Sbjct: 178 APEIL 182
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 30/166 (18%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE + ++G G+FG+VYKG + +G I VAIK+ ++ A F E
Sbjct: 34 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 92
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
+M ++ H + V+ + C + + + L C L + LN + +A
Sbjct: 93 IMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 152
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809
+ YL ++H DL +NV DFG+ RLL GD
Sbjct: 153 MMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 195
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----LNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 62 NIVK-----------LLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQ 110
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 169
Query: 823 APGLL 827
AP +L
Sbjct: 170 APEIL 174
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 63/145 (43%), Gaps = 30/145 (20%)
Query: 683 IGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKS-FEAECEVMKNIRHRNHVKRISSC 740
IG G+FG V+ GRL D VA+K + LK+ F E ++K H N V+ I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 741 SNE-------------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIH 787
+ + DF L L + L + L ++ D A+ +EYL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDF--LTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIH 236
Query: 788 CDLKPKN----------VFDFGIGR 802
DL +N + DFG+ R
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 63/145 (43%), Gaps = 30/145 (20%)
Query: 683 IGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKS-FEAECEVMKNIRHRNHVKRISSC 740
IG G+FG V+ GRL D VA+K + LK+ F E ++K H N V+ I C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 741 SNE-------------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIH 787
+ + DF L L + L + L ++ D A+ +EYL S IH
Sbjct: 182 TQKQPIYIVMELVQGGDF--LTFLRTEGARLRVKTLLQMVGDAAAGMEYL---ESKCCIH 236
Query: 788 CDLKPKN----------VFDFGIGR 802
DL +N + DFG+ R
Sbjct: 237 RDLAARNCLVTEKNVLKISDFGMSR 261
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 27/172 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 76
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFDK------------LNIMIDVASALEYLHFSHS 782
+ + S E + C + + SL F K +++ +AS + Y+ +
Sbjct: 77 QLYAVVSEEPIYIV-CEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMN- 134
Query: 783 TPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 135 --YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 23/168 (13%)
Query: 682 LIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
++G G++G VY GR L + + +AIK + + + E + K+++H+N V+ + S
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF 88
Query: 741 SNEDFKALDCLHSTNCSLNIF----------DKLNIMIDVASALEYLHFSHSTPVIHCDL 790
S F + SL+ ++ I LE L + H ++H D+
Sbjct: 89 SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDI 148
Query: 791 KPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
K NV DFG + L G +T T T+ YMAP ++
Sbjct: 149 KGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFT-GTLQYMAPEII 195
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 63 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 170
Query: 823 APGLL 827
AP +L
Sbjct: 171 APEIL 175
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 70 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 118
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 119 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 177
Query: 823 APGLL 827
AP +L
Sbjct: 178 APEIL 182
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 80 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 179
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 48.9 bits (115), Expect = 1e-05, Method: Composition-based stats.
Identities = 42/161 (26%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 75 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 133
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 134 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 174
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 63 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 112 LLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 170
Query: 823 APGLL 827
AP +L
Sbjct: 171 APEIL 175
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 62 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLW 169
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 170 YRAPEIL 176
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 63 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 170
Query: 823 APGLL 827
AP +L
Sbjct: 171 APEIL 175
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 69/172 (40%), Gaps = 27/172 (15%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
F KE +G G FG V G+ +VAIK+ + +M+ F E +VM N+ H V+
Sbjct: 28 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL 84
Query: 737 ISSCSNE-------DFKALDC----LHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPV 785
C+ + ++ A C L L + DV A+EYL S
Sbjct: 85 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQF 141
Query: 786 IHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
+H DL +N V DFG+ R + D + + + P +L
Sbjct: 142 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL 193
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 11 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 69
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 70 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 129
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 177
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 9 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 67
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 68 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 127
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 175
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 62 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 169
Query: 823 APGLL 827
AP +L
Sbjct: 170 APEIL 174
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 63 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 170
Query: 823 APGLL 827
AP +L
Sbjct: 171 APEIL 175
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 62 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 169
Query: 823 APGLL 827
AP +L
Sbjct: 170 APEIL 174
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 76
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 77 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G G V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH DL+
Sbjct: 80 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAA 138
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + I + AP
Sbjct: 139 NILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAP 179
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 75/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 67 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 115
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 116 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 174
Query: 823 APGLL 827
AP +L
Sbjct: 175 APEIL 179
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 25/171 (14%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 73
Query: 735 KRISSCSNEDF----------KALDCLH-STNCSLNIFDKLNIMIDVASALEYLHFSHST 783
+ + S E LD L T L + +++ +AS + Y+ +
Sbjct: 74 QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN-- 131
Query: 784 PVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 132 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAP 181
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 75/183 (40%), Gaps = 30/183 (16%)
Query: 668 QDLFRATEKFSKENL-----IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAEC 722
Q L + + +E+L +G G FG V+ G + VAIK M+ ++F E
Sbjct: 255 QGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEA 313
Query: 723 EVMKNIRHRNHVKRISSCSNEDF----------KALDCLH-STNCSLNIFDKLNIMIDVA 771
+VMK +RH V+ + S E LD L T L + +++ +A
Sbjct: 314 QVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIA 373
Query: 772 SALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
S + Y+ + +H DL+ N V DFG+ RL+ + + I +
Sbjct: 374 SGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW 430
Query: 822 MAP 824
AP
Sbjct: 431 TAP 433
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 48.1 bits (113), Expect = 2e-05, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 73/171 (42%), Gaps = 25/171 (14%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ + +VA+K +M++++F AE VMK ++H V
Sbjct: 15 ESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLV 73
Query: 735 KRISSCSNE------DFKA----LDCLHSTNCSLNIFDKLNIMIDVASAL-EYLHFSHST 783
K + + E +F A LD L S S KL ID ++ + E + F
Sbjct: 74 KLHAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQR 130
Query: 784 PVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
IH DL+ N+ DFG+ R++ + + I + AP
Sbjct: 131 NYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 181
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVF-----HQNCAMALKSFEAECEVMK 726
AT ++ IGVG++G+VYK R H G VA+K + ++ A ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 727 NIRHRNHVKRISSCS----NEDFKALDCLHSTNCSLNIF-DKL--------NIMIDVASA 773
H N V+ + C+ + + K + L + DK I +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
L L F H+ ++H DLKP+N+ DFG+ R+ + M +VT+ Y A
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALAPVVVTLWYRA 179
Query: 824 PGLL 827
P +L
Sbjct: 180 PEVL 183
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 69/171 (40%), Gaps = 25/171 (14%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 15 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 73
Query: 735 KRISSCSNEDF----------KALDCLH-STNCSLNIFDKLNIMIDVASALEYLHFSHST 783
+ + S E LD L T L + +++ +AS + Y+ +
Sbjct: 74 QLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMN-- 131
Query: 784 PVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 132 -YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 181
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 242
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 243 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 350
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 242
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 243 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 350
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 76
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 77 QLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAP 184
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 184 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 242
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 243 QLYAVVSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYV 302
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 350
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 30/166 (18%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE + ++G G+FG+VYKG + +G I VAIK+ ++ A F E
Sbjct: 11 ILKETE-LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEAL 69
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
+M ++ H + V+ + C + + + L C L + LN + +A
Sbjct: 70 IMASMDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKG 129
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809
+ YL ++H DL +NV DFG+ RLL GD
Sbjct: 130 MMYL---EERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK 172
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 26/173 (15%)
Query: 677 FSKENLIGVGSFGSVYKGR-LHDGIEVAIK---VFHQNCAMALKSFEAECEVMKNIRHRN 732
F E IG G F VY+ L DG+ VA+K +F A A E +++K + H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 733 HVKRISSC--SNEDFKALDCLHSTNCSLNI--FDKLNIMIDVASALEY-------LHFSH 781
+K +S NE L+ + + S I F K +I + +Y L H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 782 STPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
S V+H D+KP NVF D G+GR + + + + T YM+P
Sbjct: 154 SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS-LVGTPYYMSP 205
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 38/176 (21%)
Query: 683 IGVGSFGSVY-KGRLHDGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSC 740
+G G+FG V+ G+E IK +++ + ++ EAE EV+K++ H N +K
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 741 SNEDFKALDCLHSTNCSLNIFDKL----------------NIMIDVASALEYLHFSHSTP 784
ED+ + + T + +++ +M + +AL Y H H
Sbjct: 90 --EDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQH--- 144
Query: 785 VIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
V+H DLKP+N+ DFG+ L D T T YMAP +
Sbjct: 145 VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAAGTALYMAPEVF 198
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 76
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 77 QLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 137 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 77/184 (41%), Gaps = 31/184 (16%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVF-----HQNCAMALKSFEAECEVMK 726
AT ++ IGVG++G+VYK R H G VA+K + ++ A ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 727 NIRHRNHVKRISSCS----NEDFKALDCLHSTNCSLNIF-DKL--------NIMIDVASA 773
H N V+ + C+ + + K + L + DK I +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
L L F H+ ++H DLKP+N+ DFG+ R+ + M +VT+ Y A
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALDPVVVTLWYRA 179
Query: 824 PGLL 827
P +L
Sbjct: 180 PEVL 183
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNI-MIDVASA--------------- 773
H N VK LD +H+ N +F+ L++ + D A
Sbjct: 64 HPNIVK-----------LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL 112
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 171
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 172 YRAPEIL 178
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 77/187 (41%), Gaps = 34/187 (18%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFH--------QNCAMALKSFEAECE 723
AT ++ IGVG++G+VYK R H G VA+K ++ A
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 724 VMKNIRHRNHVKRISSCS----NEDFKALDCLHSTNCSLNIF-DKL--------NIMIDV 770
++ H N V+ + C+ + + K + L + DK I +
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLM 126
Query: 771 ASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L L F H+ ++H DLKP+N+ DFG+ R+ + M T +VT+
Sbjct: 127 RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALTPVVVTLW 184
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 185 YRAPEVL 191
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 76/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNI-MIDVASA--------------- 773
H N VK LD +H+ N +F+ L++ + D A
Sbjct: 63 HPNIVK-----------LLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYL 111
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 170
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 171 YRAPEIL 177
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 64 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYL 112
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 171
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 172 YRAPEIL 178
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 77/187 (41%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDV---ASAL------------ 774
H N VK LD +H+ N +F+ L++ + ASAL
Sbjct: 64 HPNIVK-----------LLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL 112
Query: 775 ----EYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 171
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 172 YRAPEIL 178
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 77/187 (41%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDV---ASAL------------ 774
H N VK LD +H+ N +F+ L++ + ASAL
Sbjct: 62 HPNIVK-----------LLDVIHTENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYL 110
Query: 775 ----EYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 169
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 170 YRAPEIL 176
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 67/168 (39%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 18 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 76
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 77 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 136
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL N+ DFG+ RL+ + + I + AP
Sbjct: 137 HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 184
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G ++ +VA+K M++++F E +MK ++H V+ + +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 743 E-------DFKA----LDCLHSTNCSLNIFDKL-NIMIDVASALEYLHFSHSTPVIHCDL 790
E +F A LD L S + KL + +A + Y+ + IH DL
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 135
Query: 791 KPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+ NV DFG+ R++ + + I + AP
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 179
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 31/184 (16%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVF-----HQNCAMALKSFEAECEVMK 726
AT ++ IGVG++G+VYK R H G VA+K + ++ A ++
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 727 NIRHRNHVKRISSCS----NEDFKALDCLHSTNCSLNIF-DKL--------NIMIDVASA 773
H N V+ + C+ + + K + L + DK I +
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQF 121
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
L L F H+ ++H DLKP+N+ DFG+ R+ + ++ +VT+ Y A
Sbjct: 122 LRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFP--VVVTLWYRA 179
Query: 824 PGLL 827
P +L
Sbjct: 180 PEVL 183
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 47.0 bits (110), Expect = 4e-05, Method: Composition-based stats.
Identities = 41/161 (25%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VA+K Q +M+ +F AE +MK ++H+ V+ + +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 743 EDFKALDCLHSTNCSLNIFDK--------LNIMIDVASAL-EYLHFSHSTPVIHCDLKPK 793
E + + N SL F K +N ++D+A+ + E + F IH +L+
Sbjct: 76 EPIYII-TEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRNLRAA 134
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 135 NILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAP 175
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE K ++G G+FG+VYKG + DG I VAIKV +N + A K E
Sbjct: 13 ILKETE-LRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAY 71
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIF----------DKLNIMIDVASA 773
VM + + + C + + L C L+ D LN + +A
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKG 131
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ RLL D + + V I +M
Sbjct: 132 MSYL---EDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWM 188
Query: 823 A 823
A
Sbjct: 189 A 189
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 65 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 113
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 172
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 173 YRAPEIL 179
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGR--LHDGIEVAIKVFHQNCAMALKSFE-AECEVMKNIRHR 731
E F K IG G++G VYK R L + K+ + S E ++K + H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 63 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 111
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 170
Query: 823 APGLL 827
AP +L
Sbjct: 171 APEIL 175
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGR--LHDGIEVAIKVFHQNCAMALKSFE-AECEVMKNIRHR 731
E F K IG G++G VYK R L + K+ + S E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 62 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G T +VT+ Y
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYTHEVVTLWYR 169
Query: 823 APGLL 827
AP +L
Sbjct: 170 APEIL 174
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 66/145 (45%), Gaps = 25/145 (17%)
Query: 680 ENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISS 739
E +G G FG V+ + +VA+K + +M++++F AE VMK ++H VK +
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTM-KPGSMSVEAFLAEANVMKTLQHDKLVKLHAV 245
Query: 740 CSNE------DFKA----LDCLHSTNCSLNIFDKLNIMIDVASAL-EYLHFSHSTPVIHC 788
+ E +F A LD L S S KL ID ++ + E + F IH
Sbjct: 246 VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL---IDFSAQIAEGMAFIEQRNYIHR 302
Query: 789 DLKPKNVF----------DFGIGRL 803
DL+ N+ DFG+ R+
Sbjct: 303 DLRAANILVSASLVCKIADFGLARV 327
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 69/163 (42%), Gaps = 25/163 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G + +VAIK M+ +SF E ++MK ++H V+ + S
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPG-TMSPESFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 743 EDF----------KALDCLHS-TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLK 791
E LD L +L + + +++ VA+ + Y+ + IH DL+
Sbjct: 76 EPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLR 132
Query: 792 PKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
N+ DFG+ RL+ + + I + AP
Sbjct: 133 SANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAP 175
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 64 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 171
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 172 YRAPEIL 178
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 63 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 170
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 171 YRAPEIL 177
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 61 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 168
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 169 YRAPEIL 175
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 64 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 112
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 171
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 172 YRAPEIL 178
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 62 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 169
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 170 YRAPEIL 176
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 61 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 168
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 169 YRAPEIL 175
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 63 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 170
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 171 YRAPEIL 177
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 61 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 168
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 169 YRAPEIL 175
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 61 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 109
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 168
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 169 YRAPEIL 175
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 64 HPNIVK-----------LLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYL 112
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 113 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 171
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 172 YRAPEIL 178
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 62 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+ Y
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYR 169
Query: 823 APGLL 827
AP +L
Sbjct: 170 APEIL 174
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 62 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 110
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+ Y
Sbjct: 111 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYR 169
Query: 823 APGLL 827
AP +L
Sbjct: 170 APEIL 174
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 63 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 111
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 112 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 170
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 171 YRAPEIL 177
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 50/187 (26%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNC------AMALKSFEAECEVMKNI 728
EK+ K +G G++G VYK + G VA+K + + A++ E ++K +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----EISLLKEL 76
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL------------------NIMIDV 770
H N V I D +HS C +F+ + I I +
Sbjct: 77 HHPNIVSLI-----------DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL 125
Query: 771 ASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L + H ++H DLKP+N+ DFG+ R G T +VT+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLW 184
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 185 YRAPDVL 191
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 44/185 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIRHR 731
E F K IG G++G VYK R G VA+K + A E ++K + H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA-------------- 773
N VK LD +H+ N +F+ L +D ++
Sbjct: 64 NIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQ 112
Query: 774 -LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYM 822
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+ Y
Sbjct: 113 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLWYR 171
Query: 823 APGLL 827
AP +L
Sbjct: 172 APEIL 176
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 62 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYL 110
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 111 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 169
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 170 YRAPEIL 176
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 75/187 (40%), Gaps = 44/187 (23%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEA--ECEVMKNIR 729
+ E F K IG G++G VYK R G VA+K + A E ++K +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------ 773
H N VK LD +H+ N +F+ L +D ++
Sbjct: 61 HPNIVK-----------LLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYL 109
Query: 774 ---LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L+ L F HS V+H DLKP+N+ DFG+ R G +VT+
Sbjct: 110 FQLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAF-GVPVRTYXHEVVTLW 168
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 169 YRAPEIL 175
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 74/187 (39%), Gaps = 50/187 (26%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNC------AMALKSFEAECEVMKNI 728
EK+ K +G G++G VYK + G VA+K + + A++ E ++K +
Sbjct: 21 EKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIR----EISLLKEL 76
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL------------------NIMIDV 770
H N V I D +HS C +F+ + I I +
Sbjct: 77 HHPNIVSLI-----------DVIHSERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYL 125
Query: 771 ASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
L + H ++H DLKP+N+ DFG+ R G T +VT+
Sbjct: 126 YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAF-GIPVRSYTHEVVTLW 184
Query: 821 YMAPGLL 827
Y AP +L
Sbjct: 185 YRAPDVL 191
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 46.2 bits (108), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 731 RNHVKRISSCSNEDFKALDCLHSTN-CSLNIFDKLN---------IMIDVASALEYLHFS 780
VK + +++ ++ N C L K+ ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 149
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + + V T Y++P LL
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 206
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.8 bits (107), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V+ G ++ +VA+K M++++F E +MK ++H V+ + +
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 743 E-------DFKA----LDCLHSTNCSLNIFDKL-NIMIDVASALEYLHFSHSTPVIHCDL 790
E ++ A LD L S + KL + +A + Y+ + IH DL
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDL 136
Query: 791 KPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+ NV DFG+ R++ + + I + AP
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAP 180
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
F KE +G G FG V G+ +VAIK+ + +M+ F E +VM N+ H V+
Sbjct: 19 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL 75
Query: 737 ISSCSNEDFKALDCLHSTN-CSLNIFDK----------LNIMIDVASALEYLHFSHSTPV 785
C+ + + + N C LN + L + DV A+EYL S
Sbjct: 76 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQF 132
Query: 786 IHCDLKPKN----------VFDFGIGRLLTGD 807
+H DL +N V DFG+ R + D
Sbjct: 133 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 164
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
F KE +G G FG V G+ +VAIK+ + +M+ F E +VM N+ H V+
Sbjct: 12 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL 68
Query: 737 ISSCSNEDFKALDCLHSTN-CSLNIFDK----------LNIMIDVASALEYLHFSHSTPV 785
C+ + + + N C LN + L + DV A+EYL S
Sbjct: 69 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQF 125
Query: 786 IHCDLKPKN----------VFDFGIGRLLTGD 807
+H DL +N V DFG+ R + D
Sbjct: 126 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 157
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
F KE +G G FG V G+ +VAIK+ + +M+ F E +VM N+ H V+
Sbjct: 13 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 737 ISSCSNEDFKALDCLHSTN-CSLNIFDK----------LNIMIDVASALEYLHFSHSTPV 785
C+ + + + N C LN + L + DV A+EYL S
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQF 126
Query: 786 IHCDLKPKN----------VFDFGIGRLLTGD 807
+H DL +N V DFG+ R + D
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 158
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
F KE +G G FG V G+ +VAIK+ + +M+ F E +VM N+ H V+
Sbjct: 13 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL 69
Query: 737 ISSCSNEDFKALDCLHSTN-CSLNIFDK----------LNIMIDVASALEYLHFSHSTPV 785
C+ + + + N C LN + L + DV A+EYL S
Sbjct: 70 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQF 126
Query: 786 IHCDLKPKN----------VFDFGIGRLLTGD 807
+H DL +N V DFG+ R + D
Sbjct: 127 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 158
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 27/152 (17%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
F KE +G G FG V G+ +VAIK+ + +M+ F E +VM N+ H V+
Sbjct: 8 FLKE--LGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQL 64
Query: 737 ISSCSNEDFKALDCLHSTN-CSLNIFDK----------LNIMIDVASALEYLHFSHSTPV 785
C+ + + + N C LN + L + DV A+EYL S
Sbjct: 65 YGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYL---ESKQF 121
Query: 786 IHCDLKPKN----------VFDFGIGRLLTGD 807
+H DL +N V DFG+ R + D
Sbjct: 122 LHRDLAARNCLVNDQGVVKVSDFGLSRYVLDD 153
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 40/198 (20%)
Query: 665 FSYQDLFRATEKFSKE------NLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMAL--- 715
FS+ +L T F + N +G G FG VYKG +++ VA+K +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 67
Query: 716 -KSFEAECEVMKNIRHRNHVKRISSCSNED--------------FKALDCLHSTNCSLNI 760
+ F+ E +VM +H N V+ + S+ D L CL T L+
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSW 126
Query: 761 FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810
+ I A+ + +LH +H IH D+K N+ DFG+ R
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 183
Query: 811 IQTETLV-TIGYMAPGLL 827
+ +V T YMAP L
Sbjct: 184 VMXXRIVGTTAYMAPEAL 201
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 82/198 (41%), Gaps = 40/198 (20%)
Query: 665 FSYQDLFRATEKFSKE------NLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMAL--- 715
FS+ +L T F + N +G G FG VYKG +++ VA+K +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEEL 73
Query: 716 -KSFEAECEVMKNIRHRNHVKRISSCSNED--------------FKALDCLHSTNCSLNI 760
+ F+ E +VM +H N V+ + S+ D L CL T L+
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSW 132
Query: 761 FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG-DRS 809
+ I A+ + +LH +H IH D+K N+ DFG+ R ++
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 810 MIQTETLVTIGYMAPGLL 827
++ + + T YMAP L
Sbjct: 190 VMXSRIVGTTAYMAPEAL 207
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRL--HDG--IEVAIKVFHQNCAMALKS-FEAECEVMKN 727
A E ++G G FG VY+G H G I VA+K ++C + K F +E +MKN
Sbjct: 22 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 81
Query: 728 IRHRNHVKRISSCSNEDFKAL----------DCLHSTNCSLNIFDKLNIMIDVASALEYL 777
+ H + VK I E + L SL + + + + A+ YL
Sbjct: 82 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 141
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
S +H D+ +N+ DFG+ R + + + T + I +M+P
Sbjct: 142 ---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 195
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 40/198 (20%)
Query: 665 FSYQDLFRATEKFSKE------NLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMAL--- 715
FS+ +L T F + N +G G FG VYKG +++ VA+K +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTT-VAVKKLAAMVDITTEEL 73
Query: 716 -KSFEAECEVMKNIRHRNHVKRISSCSNED--------------FKALDCLHSTNCSLNI 760
+ F+ E +VM +H N V+ + S+ D L CL T L+
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTP-PLSW 132
Query: 761 FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810
+ I A+ + +LH +H IH D+K N+ DFG+ R
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 811 IQTETLV-TIGYMAPGLL 827
+ +V T YMAP L
Sbjct: 190 VMXXRIVGTTAYMAPEAL 207
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGR--LHDGIEVAIKVFHQNCA---MALKSFEAECEV 724
L RA +++ IG G++G V+K R + G VA+K M L + E V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAV 64
Query: 725 MKNIR---HRNHVKRISSCS----NEDFKALDCLHSTNCSLNIF-DKL-----------N 765
++++ H N V+ C+ + + K + L + DK+ +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET 815
+M + L++LH SH V+H DLKP+N+ DFG+ R+ + M T
Sbjct: 125 MMFQLLRGLDFLH-SHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSV 179
Query: 816 LVTIGYMAPGLL 827
+VT+ Y AP +L
Sbjct: 180 VVTLWYRAPEVL 191
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 683 IGVGSFGSV---YKGRLHDGIEVAIKVFH---QNCAMALKSFEAECEVMKNIRHRNHVKR 736
+G G++GSV Y RL +VA+K Q+ A +++ E ++K+++H N +
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 737 IS----SCSNEDFKALDCLHS-TNCSLNIFDKLNIMID------VASALEYLHFSHSTPV 785
+ + S EDF + + + LN K + D V L L + HS +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 786 IHCDLKPKNV----------FDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
IH DLKP NV DFG+ R D M T + T Y AP ++
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLAR--QADEEM--TGYVATRWYRAPEIM 200
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 683 IGVGSFGSV---YKGRLHDGIEVAIKVFH---QNCAMALKSFEAECEVMKNIRHRNHVKR 736
+G G++GSV Y RL +VA+K Q+ A +++ E ++K+++H N +
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 92
Query: 737 IS----SCSNEDFKALDCLHS-TNCSLNIFDKLNIMID------VASALEYLHFSHSTPV 785
+ + S EDF + + + LN K + D V L L + HS +
Sbjct: 93 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 152
Query: 786 IHCDLKPKNV----------FDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
IH DLKP NV DFG+ R D M T + T Y AP ++
Sbjct: 153 IHRDLKPSNVAVNEDSELRILDFGLAR--QADEEM--TGYVATRWYRAPEIM 200
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRL--HDG--IEVAIKVFHQNCAMALKS-FEAECEVMKN 727
A E ++G G FG VY+G H G I VA+K ++C + K F +E +MKN
Sbjct: 10 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 69
Query: 728 IRHRNHVKRISSCSNEDFKAL----------DCLHSTNCSLNIFDKLNIMIDVASALEYL 777
+ H + VK I E + L SL + + + + A+ YL
Sbjct: 70 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 129
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
S +H D+ +N+ DFG+ R + + + T + I +M+P
Sbjct: 130 ---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 183
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 66/160 (41%), Gaps = 31/160 (19%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE 814
IH DL +N+ DFG+ ++L D+ + +
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVK 174
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGR--LHDGIEVAIKVFHQNCA---MALKSFEAECEV 724
L RA +++ IG G++G V+K R + G VA+K M L + E V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAV 64
Query: 725 MKNIR---HRNHVKRISSCS----NEDFKALDCLHSTNCSLNIF-DKL-----------N 765
++++ H N V+ C+ + + K + L + DK+ +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET 815
+M + L++LH SH V+H DLKP+N+ DFG+ R+ + M T
Sbjct: 125 MMFQLLRGLDFLH-SHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSV 179
Query: 816 LVTIGYMAPGLL 827
+VT+ Y AP +L
Sbjct: 180 VVTLWYRAPEVL 191
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVA----IKVFHQNCAMALKSFEAECEVMKNIRH 730
+K+ K IG G++G+V+K + + E+ +++ + + + C ++K ++H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKH 60
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSLN-IFDKLNIMID-------VASALEYLHFSHS 782
+N V R+ + D K + L FD N +D + L+ L F HS
Sbjct: 61 KNIV-RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 783 TPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
V+H DLKP+N+ DFG+ R G + +VT+ Y P +L
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLADFGLARAF-GIPVRCYSAEVVTLWYRPPDVL 173
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG G FG V+ G + +VAIK + AM+ + F E EVM + H V+ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 743 E-------DFKALDCLHS-TNCSLNIFDK---LNIMIDVASALEYLHFSHSTPVIHCDLK 791
+ +F CL +F L + +DV + YL VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEASVIHRDLA 130
Query: 792 PKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+N V DFG+ R + D+ T T + + +P
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 73/177 (41%), Gaps = 28/177 (15%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRL--HDG--IEVAIKVFHQNCAMALKS-FEAECEVMKN 727
A E ++G G FG VY+G H G I VA+K ++C + K F +E +MKN
Sbjct: 6 AREDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKN 65
Query: 728 IRHRNHVKRISSCSNEDFKAL----------DCLHSTNCSLNIFDKLNIMIDVASALEYL 777
+ H + VK I E + L SL + + + + A+ YL
Sbjct: 66 LDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYL 125
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
S +H D+ +N+ DFG+ R + + + T + I +M+P
Sbjct: 126 ---ESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSP 179
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 45.1 bits (105), Expect = 2e-04, Method: Composition-based stats.
Identities = 40/168 (23%), Positives = 68/168 (40%), Gaps = 19/168 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
E E +G G FG V+ G + VAIK M+ ++F E +VMK +RH V
Sbjct: 7 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLV 65
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFD-------KLNIMIDVASALEY-LHFSHSTPVI 786
+ + S E + S L+ +L ++D+A+ + + + +
Sbjct: 66 QLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYV 125
Query: 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
H DL+ N+ DFG+ RL+ + + I + AP
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAP 173
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 76/172 (44%), Gaps = 34/172 (19%)
Query: 683 IGVGSFGSV---YKGRLHDGIEVAIKVFH---QNCAMALKSFEAECEVMKNIRHRNHVKR 736
+G G++GSV Y RL +VA+K Q+ A +++ E ++K+++H N +
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYR-ELRLLKHLKHENVIGL 84
Query: 737 IS----SCSNEDFKALDCLHS-TNCSLNIFDKLNIMID------VASALEYLHFSHSTPV 785
+ + S EDF + + + LN K + D V L L + HS +
Sbjct: 85 LDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHSAGI 144
Query: 786 IHCDLKPKNV----------FDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
IH DLKP NV DFG+ R D M T + T Y AP ++
Sbjct: 145 IHRDLKPSNVAVNEDCELRILDFGLAR--QADEEM--TGYVATRWYRAPEIM 192
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/192 (26%), Positives = 85/192 (44%), Gaps = 40/192 (20%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGR--LHDGIEVAIKVFHQNCA---MALKSFEAECEV 724
L RA +++ IG G++G V+K R + G VA+K M L + E V
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIR-EVAV 64
Query: 725 MKNIR---HRNHVKRISSCS----NEDFKALDCLHSTNCSLNIF-DKL-----------N 765
++++ H N V+ C+ + + K + L + DK+ +
Sbjct: 65 LRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKD 124
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET 815
+M + L++LH SH V+H DLKP+N+ DFG+ R+ + M T
Sbjct: 125 MMFQLLRGLDFLH-SHR--VVHRDLKPQNILVTSSGQIKLADFGLARIYSF--QMALTSV 179
Query: 816 LVTIGYMAPGLL 827
+VT+ Y AP +L
Sbjct: 180 VVTLWYRAPEVL 191
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 152
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 165
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 166 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 200
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 152
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 153 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 187
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 132
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 133 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 167
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 150
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + + V T Y++P LL
Sbjct: 151 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 207
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 134
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 135 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 138
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 139 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 173
>pdb|2OMX|A Chain A, Crystal Structure Of Inla S192n G194s+sHEC1 COMPLEX
Length = 462
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 79/168 (47%), Gaps = 13/168 (7%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDL 483
L L GL L FN I D L +L LN L L+ N S S L LTSL+ +
Sbjct: 103 LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLNF 158
Query: 484 GSNRLTSVLPSTFWNLKDILFFDLSSNSL-DGPLSLDIGNLRVVIGINLSRNNFSGDIPS 542
SN++T + P NL + D+SSN + D + + NL +I N N S P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITP- 212
Query: 543 TIGDLKDLQNISLACNGLEGL-IPESFGYLTELNLSFNKLEGEIPRGG 589
+G L +L +SL N L+ + S LT+L+L+ N++ P G
Sbjct: 213 -LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 259
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 91/396 (22%), Positives = 161/396 (40%), Gaps = 70/396 (17%)
Query: 145 MHKLKFLDFSDNQLSGSLSSVT--FNLSSVLDIRLDSDKLSGELPV-NICNYLHYLKVLF 201
++ L ++FS+NQL+ +T NL+ ++DI +++++++ P+ N+ N L L
Sbjct: 62 LNNLTQINFSNNQLTD----ITPLKNLTKLVDILMNNNQIADITPLANLTN----LTGLT 113
Query: 202 LAKNMFHGQIPL--------------------ALSKCKRLQLLNLGFKKLSGAIPKEISN 241
L N PL ALS LQ LN +++ P ++N
Sbjct: 114 LFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKP--LAN 171
Query: 242 LTILRKISLRNNKLRGEIPHEIGYLPXXXXXXXXXXXXXXXXPAAIFNMSTVKKIYLLDN 301
LT L ++ + +NK+ + L P I ++ + ++ L N
Sbjct: 172 LTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGN 227
Query: 302 SLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIP---- 357
L +G SL N+ L+L N+ S P ++ +KL L +G N S I P
Sbjct: 228 QL---KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGL 282
Query: 358 ---NTIGLTGNPLDGVLPTSIGNL-SMSLENIYISNCNIGGSIPQXXXXXXXXXXXXXEG 413
+ L N L+ + P I NL +++ +Y +N + +
Sbjct: 283 TALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFY----N 336
Query: 414 NKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSG------- 466
NK+ S + L + L N+++ P L +L R+ LGL ++
Sbjct: 337 NKV--SDVSSLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTNAPVNYKA 392
Query: 467 --SIPSCLGNLT-SLRSPDLGSNRLTSVLPSTFWNL 499
SIP+ + N+T +L +P S+ + P WNL
Sbjct: 393 NVSIPNTVKNVTGALIAPATISDGGSYTEPDITWNL 428
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 141
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 142 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 176
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 76/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 146
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + + V T Y++P LL
Sbjct: 147 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELL 203
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 133
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 134 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 168
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 139
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 140 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 174
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 140
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 141 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 175
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG G FG V+ G + +VAIK + AM+ + F E EVM + H V+ C
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 743 E-------DFKALDCLHS-TNCSLNIFDK---LNIMIDVASALEYLHFSHSTPVIHCDLK 791
+ +F CL +F L + +DV + YL VIH DL
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 128
Query: 792 PKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+N V DFG+ R + D+ T T + + +P
Sbjct: 129 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 171
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG G FG V+ G + +VAIK + AM+ + F E EVM + H V+ C
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 743 E-------DFKALDCLHS-TNCSLNIFDK---LNIMIDVASALEYLHFSHSTPVIHCDLK 791
+ +F CL +F L + +DV + YL VIH DL
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 133
Query: 792 PKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+N V DFG+ R + D+ T T + + +P
Sbjct: 134 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 176
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG G FG V+ G + +VAIK + AM+ + F E EVM + H V+ C
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 743 E-------DFKALDCLHS-TNCSLNIFDK---LNIMIDVASALEYLHFSHSTPVIHCDLK 791
+ +F CL +F L + +DV + YL VIH DL
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 130
Query: 792 PKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+N V DFG+ R + D+ T T + + +P
Sbjct: 131 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 173
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 44.3 bits (103), Expect = 3e-04, Method: Composition-based stats.
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG G FG V+ G + +VAIK + AM+ + F E EVM + H V+ C
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 743 E-------DFKALDCLHS-TNCSLNIFDK---LNIMIDVASALEYLHFSHSTPVIHCDLK 791
+ +F CL +F L + +DV + YL VIH DL
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 131
Query: 792 PKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+N V DFG+ R + D+ T T + + +P
Sbjct: 132 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 174
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 35 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 94
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 95 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 152
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 153 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 209
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 149
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKN 727
+ E F ++G GSF +V R L E AIK+ + + + E +VM
Sbjct: 7 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 66
Query: 728 IRHRNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYL 777
+ H VK + +++ ++ N L FD+ ++ SALEYL
Sbjct: 67 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 126
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGL 826
H +IH DLKP+N+ DFG ++L+ + + V T Y++P L
Sbjct: 127 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 183
Query: 827 L 827
L
Sbjct: 184 L 184
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 81/177 (45%), Gaps = 30/177 (16%)
Query: 675 EKFSKENLIGVGSFGSVYKGR--LHDGIEV--AIKVFHQNCA--MALKSFEAECEVMKNI 728
E + K + +G G++ +VYKG+ L D + I++ H+ A A++ E ++K++
Sbjct: 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIR----EVSLLKDL 57
Query: 729 RHRNHVKRISSCSNED-----FKALDC---LHSTNCSLNIFDKLNIMIDVASALEYLHFS 780
+H N V E F+ LD + +C NI + N+ + + L L +
Sbjct: 58 KHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCG-NIINMHNVKLFLFQLLRGLAYC 116
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
H V+H DLKP+N+ DFG+ R + E +VT+ Y P +L
Sbjct: 117 HRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNE-VVTLWYRPPDIL 172
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L + ++ L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 149
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 147
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELL 204
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 33 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 92
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 93 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 150
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 151 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 207
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 149
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 77/179 (43%), Gaps = 30/179 (16%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 37 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 96
Query: 731 RNHVKRISSCSNEDFKALDCL-HSTNCSL-------NIFDKLNIMI---DVASALEYLHF 779
VK + C +D K L ++ N L FD+ ++ SALEYLH
Sbjct: 97 PFFVK-LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH- 154
Query: 780 SHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 155 --GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 211
>pdb|2OMU|A Chain A, Crystal Structure Of Inla G194s+s Y369s/hec1 Complex
Length = 462
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDL 483
L L GL L FN I D L +L LN L L+ N S S L LTSL+
Sbjct: 103 LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSF 158
Query: 484 GSNRLTSVLPSTFWNLKDILFFDLSSNSL-DGPLSLDIGNLRVVIGINLSRNNFSGDIPS 542
SN++T + P NL + D+SSN + D + + NL +I N N S P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITP- 212
Query: 543 TIGDLKDLQNISLACNGLEGL-IPESFGYLTELNLSFNKLEGEIPRGG 589
+G L +L +SL N L+ + S LT+L+L+ N++ P G
Sbjct: 213 -LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 259
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 147
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 149
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
>pdb|2OMT|A Chain A, Crystal Structure Of Inla G194s+sHEC1 COMPLEX
Length = 462
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 78/168 (46%), Gaps = 13/168 (7%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDL 483
L L GL L FN I D L +L LN L L+ N S S L LTSL+
Sbjct: 103 LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLELSSNTISD--ISALSGLTSLQQLSF 158
Query: 484 GSNRLTSVLPSTFWNLKDILFFDLSSNSL-DGPLSLDIGNLRVVIGINLSRNNFSGDIPS 542
SN++T + P NL + D+SSN + D + + NL +I N N S P
Sbjct: 159 SSNQVTDLKP--LANLTTLERLDISSNKVSDISVLAKLTNLESLIATN---NQISDITP- 212
Query: 543 TIGDLKDLQNISLACNGLEGL-IPESFGYLTELNLSFNKLEGEIPRGG 589
+G L +L +SL N L+ + S LT+L+L+ N++ P G
Sbjct: 213 -LGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSG 259
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 147
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKN 727
+ E F ++G GSF +V R L E AIK+ + + + E +VM
Sbjct: 4 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 63
Query: 728 IRHRNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYL 777
+ H VK + +++ ++ N L FD+ ++ SALEYL
Sbjct: 64 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 123
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGL 826
H +IH DLKP+N+ DFG ++L+ + + V T Y++P L
Sbjct: 124 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 180
Query: 827 L 827
L
Sbjct: 181 L 181
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKN 727
+ E F ++G GSF +V R L E AIK+ + + + E +VM
Sbjct: 6 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 65
Query: 728 IRHRNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYL 777
+ H VK + +++ ++ N L FD+ ++ SALEYL
Sbjct: 66 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 125
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGL 826
H +IH DLKP+N+ DFG ++L+ + + V T Y++P L
Sbjct: 126 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 182
Query: 827 L 827
L
Sbjct: 183 L 183
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 149
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 150 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 206
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 28/181 (15%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKN 727
+ E F ++G GSF +V R L E AIK+ + + + E +VM
Sbjct: 5 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSR 64
Query: 728 IRHRNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYL 777
+ H VK + +++ ++ N L FD+ ++ SALEYL
Sbjct: 65 LDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 124
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGL 826
H +IH DLKP+N+ DFG ++L+ + + V T Y++P L
Sbjct: 125 H---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPEL 181
Query: 827 L 827
L
Sbjct: 182 L 182
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 146
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 147 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 203
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 77/190 (40%), Gaps = 47/190 (24%)
Query: 673 ATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFE-AECEVMKNIRH 730
++ +F + +G G++ +VYKG G+ VA+K + S E +MK ++H
Sbjct: 3 SSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKH 62
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSLNIFD----KLNIMIDVASA------------- 773
N V+ D +H+ N +F+ L +D +
Sbjct: 63 ENIVR-----------LYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 774 ------LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV 817
L+ L F H ++H DLKP+N+ DFG+ R + +E +V
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSE-VV 170
Query: 818 TIGYMAPGLL 827
T+ Y AP +L
Sbjct: 171 TLWYRAPDVL 180
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 36 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 94
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 154
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 155 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 211
Query: 823 A 823
A
Sbjct: 212 A 212
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 823 A 823
A
Sbjct: 190 A 190
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 137 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 823 A 823
A
Sbjct: 194 A 194
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 75/178 (42%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF +V R L E AIK+ + + + E +VM + H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 131
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 132 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 188
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 823 A 823
A
Sbjct: 190 A 190
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 656 GGKSKTLRRFSYQDL----FRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH-- 708
G S+ F Q+L + E++ + +G G++GSV G+ VA+K
Sbjct: 1 GSHSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 709 -QNCAMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFD 762
Q+ A +++ E ++K+++H N + + + S E+F + + H LN
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 763 KLNIMID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTG 806
K + D + L L + HS +IH DLKP N + DFG+ R
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HT 177
Query: 807 DRSMIQTETLVTIGYMAPGLL 827
D M T + T Y AP ++
Sbjct: 178 DDEM--TGYVATRWYRAPEIM 196
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 65/163 (39%), Gaps = 25/163 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
IG G FG V+ G + +VAIK + +M+ F E EVM + H V+ C
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEG-SMSEDDFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 743 E-------DFKALDCLHST-NCSLNIFDK---LNIMIDVASALEYLHFSHSTPVIHCDLK 791
+ +F CL +F L + +DV + YL VIH DL
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYL---EEACVIHRDLA 150
Query: 792 PKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+N V DFG+ R + D+ T T + + +P
Sbjct: 151 ARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASP 193
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 823 A 823
A
Sbjct: 189 A 189
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 44/184 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFH---QNCAMALKSFEAECEVMKNIRHR 731
EK+ IG G++G VYK + + G A+K ++ + + E ++K ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHS 60
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLN----IMIDVASA-------------- 773
N V K D +H+ + +F+ L+ ++DV
Sbjct: 61 NIV-----------KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 774 LEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMA 823
L + + H V+H DLKP+N + DFG+ R G T +VT+ Y A
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEIVTLWYRA 168
Query: 824 PGLL 827
P +L
Sbjct: 169 PDVL 172
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 656 GGKSKTLRRFSYQDL----FRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH-- 708
G S+ F Q+L + E++ + +G G++GSV G+ VA+K
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 709 -QNCAMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFD 762
Q+ A +++ E ++K+++H N + + + S E+F + + H LN
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 763 KLNIMID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTG 806
K + D + L L + HS +IH DLKP N + DFG+ R
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HT 177
Query: 807 DRSMIQTETLVTIGYMAPGLL 827
D M T + T Y AP ++
Sbjct: 178 DDEM--TGYVATRWYRAPEIM 196
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 823 A 823
A
Sbjct: 190 A 190
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + IG G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 22 IWEVPERYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 80
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM--TGYVATRWYRAP 196
Query: 825 GLL 827
++
Sbjct: 197 EIM 199
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 823 A 823
A
Sbjct: 187 A 187
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%), Gaps = 30/197 (15%)
Query: 656 GGKSKTLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNC 711
G + R+ + ++ E++ + +G G++GSV G+ VA+K Q+
Sbjct: 1 GSRPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSI 60
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNI 766
A +++ E ++K+++H N + + + S E+F + + H LN K
Sbjct: 61 IHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQK 119
Query: 767 MID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSM 810
+ D + L L + HS +IH DLKP N + DFG+ R D M
Sbjct: 120 LTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM 177
Query: 811 IQTETLVTIGYMAPGLL 827
T + T Y AP ++
Sbjct: 178 --TGYVATRWYRAPEIM 192
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 43.1 bits (100), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/134 (24%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Query: 676 KFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFH----QNCAMALKSFEAECEVMKNIRHR 731
+ + E +IG+G FG VY+ G EVA+K ++ + +++ E ++ ++H
Sbjct: 8 ELTLEEIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHP 66
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFDK---------LNIMIDVASALEYLHFSHS 782
N + C E L + LN +N + +A + YLH
Sbjct: 67 NIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAI 126
Query: 783 TPVIHCDLKPKNVF 796
P+IH DLK N+
Sbjct: 127 VPIIHRDLKSSNIL 140
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 34/200 (17%)
Query: 657 GKSKTLRRFSYQDL----FRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH--- 708
G S+ F Q+L + E++ + +G G++GSV G+ VA+K
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 709 QNCAMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDK 763
Q+ A +++ E ++K+++H N + + + S E+F + + H LN K
Sbjct: 71 QSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 129
Query: 764 LNIMID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGD 807
+ D + L L + HS +IH DLKP N + DFG+ R D
Sbjct: 130 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTD 187
Query: 808 RSMIQTETLVTIGYMAPGLL 827
M T + T Y AP ++
Sbjct: 188 DEM--TGYVATRWYRAPEIM 205
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 8 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 66
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEG 126
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 127 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 823 A 823
A
Sbjct: 184 A 184
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 656 GGKSKTLRRFSYQDL----FRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH-- 708
G S+ F Q+L + E++ + +G G++GSV G+ VA+K
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 70
Query: 709 -QNCAMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFD 762
Q+ A +++ E ++K+++H N + + + S E+F + + H LN
Sbjct: 71 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 763 KLNIMID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTG 806
K + D + L L + HS +IH DLKP N + DFG+ R
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HT 187
Query: 807 DRSMIQTETLVTIGYMAPGLL 827
D M T + T Y AP ++
Sbjct: 188 DDEM--TGYVATRWYRAPEIM 206
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 44/184 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFH---QNCAMALKSFEAECEVMKNIRHR 731
EK+ IG G++G VYK + + G A+K ++ + + E ++K ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHS 60
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLN----IMIDVASA-------------- 773
N V K D +H+ + +F+ L+ ++DV
Sbjct: 61 NIV-----------KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 774 LEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMA 823
L + + H V+H DLKP+N + DFG+ R G T +VT+ Y A
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRA 168
Query: 824 PGLL 827
P +L
Sbjct: 169 PDVL 172
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 656 GGKSKTLRRFSYQDL----FRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH-- 708
G S+ F Q+L + E++ + +G G++GSV G+ VA+K
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 70
Query: 709 -QNCAMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFD 762
Q+ A +++ E ++K+++H N + + + S E+F + + H LN
Sbjct: 71 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 763 KLNIMID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTG 806
K + D + L L + HS +IH DLKP N + DFG+ R
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HT 187
Query: 807 DRSMIQTETLVTIGYMAPGLL 827
D M T + T Y AP ++
Sbjct: 188 DDEM--TGYVATRWYRAPEIM 206
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 91/209 (43%), Gaps = 34/209 (16%)
Query: 644 AVPLALKYKSIRGGKSKTLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEV 702
A P + +K + R+ + ++ E++ + +G G++GSV + G+++
Sbjct: 24 AAPFTMSHKE----RPTFYRQELNKTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKI 79
Query: 703 AIKVFH---QNCAMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HST 754
A+K Q+ A +++ E ++K+++H N + + + S E+F + + H
Sbjct: 80 AVKKLSRPFQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM 138
Query: 755 NCSLNIFDKLNIMID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDF 798
LN K + D + L L + HS +IH DLKP N + DF
Sbjct: 139 GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDF 198
Query: 799 GIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
G+ R D M T + T Y AP ++
Sbjct: 199 GLAR--HTDDEM--TGYVATRWYRAPEIM 223
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 656 GGKSKTLRRFSYQDL----FRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH-- 708
G S+ F Q+L + E++ + +G G++GSV G+ VA+K
Sbjct: 11 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKP 70
Query: 709 -QNCAMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFD 762
Q+ A +++ E ++K+++H N + + + S E+F + + H LN
Sbjct: 71 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 129
Query: 763 KLNIMID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTG 806
K + D + L L + HS +IH DLKP N + DFG+ R
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HT 187
Query: 807 DRSMIQTETLVTIGYMAPGLL 827
D M T + T Y AP ++
Sbjct: 188 DDEM--TGYVATRWYRAPEIM 206
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 656 GGKSKTLRRFSYQDL----FRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH-- 708
G S+ F Q+L + E++ + +G G++GSV G+ VA+K
Sbjct: 1 GSMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRP 60
Query: 709 -QNCAMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFD 762
Q+ A +++ E ++K+++H N + + + S E+F + + H LN
Sbjct: 61 FQSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIV 119
Query: 763 KLNIMID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTG 806
K + D + L L + HS +IH DLKP N + DFG+ R
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HT 177
Query: 807 DRSMIQTETLVTIGYMAPGLL 827
D M T + T Y AP ++
Sbjct: 178 DDEM--TGYVATRWYRAPEIM 196
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 17 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 75
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 135
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 136 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 192
Query: 823 A 823
A
Sbjct: 193 A 193
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 76/184 (41%), Gaps = 44/184 (23%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFH---QNCAMALKSFEAECEVMKNIRHR 731
EK+ IG G++G VYK + + G A+K ++ + + E ++K ++H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIR-EISILKELKHS 60
Query: 732 NHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLN----IMIDVASA-------------- 773
N V K D +H+ + +F+ L+ ++DV
Sbjct: 61 NIV-----------KLYDVIHTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQL 109
Query: 774 LEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMA 823
L + + H V+H DLKP+N + DFG+ R G T +VT+ Y A
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAF-GIPVRKYTHEVVTLWYRA 168
Query: 824 PGLL 827
P +L
Sbjct: 169 PDVL 172
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGXVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 21 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 79
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 139
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 140 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 196
Query: 823 A 823
A
Sbjct: 197 A 197
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 78/175 (44%), Gaps = 25/175 (14%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVA----IKVFHQNCAMALKSFEAECEVMKNIRH 730
+K+ K IG G++G+V+K + + E+ +++ + + + C ++K ++H
Sbjct: 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC-LLKELKH 60
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSLN-IFDKLNIMID-------VASALEYLHFSHS 782
+N V R+ + D K + L FD N +D + L+ L F HS
Sbjct: 61 KNIV-RLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHS 119
Query: 783 TPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
V+H DLKP+N+ +FG+ R G + +VT+ Y P +L
Sbjct: 120 RNVLHRDLKPQNLLINRNGELKLANFGLARAF-GIPVRCYSAEVVTLWYRPPDVL 173
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 27/174 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHD---GIEVAIKVFH---QNCAMALKSFEAECEVMKNI 728
E++ + +G G +VY D I+VAIK + LK FE E +
Sbjct: 11 ERYKIVDKLGGGGMSTVYLAE--DTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQL 68
Query: 729 RHRNHVKRISSCSNED--FKALDCLHSTNCSLNIFDKLNIMIDVA-----SALEYLHFSH 781
H+N V I +D + ++ + S I + +D A L+ + +H
Sbjct: 69 SHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH 128
Query: 782 STPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQT-ETLVTIGYMAP 824
++H D+KP+N +FDFGI + L+ + S+ QT L T+ Y +P
Sbjct: 129 DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALS-ETSLTQTNHVLGTVQYFSP 181
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 823 A 823
A
Sbjct: 187 A 187
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 86/200 (43%), Gaps = 34/200 (17%)
Query: 657 GKSKTLRRFSYQDL----FRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH--- 708
G S+ F Q+L + E++ + +G G++GSV G+ VA+K
Sbjct: 11 GMSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPF 70
Query: 709 QNCAMALKSFEAECEVMKNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDK 763
Q+ A +++ E ++K+++H N + + + S E+F + + H LN K
Sbjct: 71 QSIIHAKRTYR-ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK 129
Query: 764 LNIMID------VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGD 807
+ D + L L + HS +IH DLKP N + DFG+ R D
Sbjct: 130 CQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTD 187
Query: 808 RSMIQTETLVTIGYMAPGLL 827
M T + T Y AP ++
Sbjct: 188 DEM--TGYVATRWYRAPEIM 205
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +TE T+ Y+ P ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPEMI 178
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 82
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R T D T + T Y AP
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE---MTGYVATRWYRAP 198
Query: 825 GLL 827
++
Sbjct: 199 EIM 201
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 5 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 63
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 123
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 124 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 823 A 823
A
Sbjct: 181 A 181
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 42.7 bits (99), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 82
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R T D T + T Y AP
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE---MTGYVATRWYRAP 198
Query: 825 GLL 827
++
Sbjct: 199 EIM 201
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 80
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFGLAR--HTDDEM--TGYVATRWYRAP 196
Query: 825 GLL 827
++
Sbjct: 197 EIM 199
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.7 bits (99), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 71
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 187
Query: 825 GLL 827
++
Sbjct: 188 EIM 190
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 82
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R T D T + T Y AP
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR-HTADE---MTGYVATRWYRAP 198
Query: 825 GLL 827
++
Sbjct: 199 EIM 201
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 134 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 823 A 823
A
Sbjct: 191 A 191
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 72
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 132
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 188
Query: 825 GLL 827
++
Sbjct: 189 EIM 191
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 14 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 72
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 132
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 133 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 189
Query: 823 A 823
A
Sbjct: 190 A 190
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 95
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 211
Query: 825 GLL 827
++
Sbjct: 212 EIM 214
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 823 A 823
A
Sbjct: 189 A 189
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 98
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 214
Query: 825 GLL 827
++
Sbjct: 215 EIM 217
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 94
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 210
Query: 825 GLL 827
++
Sbjct: 211 EIM 213
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 81
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLAR--HTDDEM--TGYVATRWYRAP 197
Query: 825 GLL 827
++
Sbjct: 198 EIM 200
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 64/155 (41%), Gaps = 31/155 (20%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L + L ++ L + +EYL +
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 137
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRS 809
IH DL +N+ DFG+ ++L D+
Sbjct: 138 YIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 172
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 131 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 823 A 823
A
Sbjct: 188 A 188
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 14 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 72
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 73 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 132
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 133 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 188
Query: 825 GLL 827
++
Sbjct: 189 EIM 191
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 823 A 823
A
Sbjct: 187 A 187
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 19 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 77
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 78 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 137
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 138 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 193
Query: 825 GLL 827
++
Sbjct: 194 EIM 196
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 80
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 196
Query: 825 GLL 827
++
Sbjct: 197 EIM 199
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 66/161 (40%), Gaps = 31/161 (19%)
Query: 683 IGVGSFGSVYKGR---LHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
+G G+FGSV R L D G VA+K + L+ FE E E++K+++H N VK
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 738 SSCSNEDFKAL-------------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
C + + L D L ++ L + +EYL +
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYL---GTKR 135
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET 815
IH +L +N+ DFG+ ++L D+ + +
Sbjct: 136 YIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKE 176
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 24 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 82
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 83 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 142
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 143 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 198
Query: 825 GLL 827
++
Sbjct: 199 EIM 201
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 22 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 80
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 81 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 140
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 141 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 196
Query: 825 GLL 827
++
Sbjct: 197 EIM 199
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 16 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 74
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 75 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 134
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 135 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 190
Query: 825 GLL 827
++
Sbjct: 191 EIM 193
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 81
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 197
Query: 825 GLL 827
++
Sbjct: 198 EIM 200
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 74/178 (41%), Gaps = 28/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMA---LKSFEAECEVMKNIRH 730
E F ++G GSF + R L E AIK+ + + + E +VM + H
Sbjct: 30 EDFKFGKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMI---DVASALEYLHFS 780
VK + +++ ++ N L FD+ ++ SALEYLH
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH-- 147
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
+IH DLKP+N+ DFG ++L+ + + V T Y++P LL
Sbjct: 148 -GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELL 204
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 46/185 (24%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
+G G+FG V+ + D + VA+K A K F+ E E++ N++H + VK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIF--------------------------DKLNIMIDV 770
C + D + + + LN F L+I +
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 771 ASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGR-LLTGDRSMIQTETLVTI 819
AS + YL H +H DL +N + DFG+ R + + D + T++ I
Sbjct: 143 ASGMVYLASQH---FVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPI 199
Query: 820 GYMAP 824
+M P
Sbjct: 200 RWMPP 204
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 77/196 (39%), Gaps = 40/196 (20%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+Y+D RA +F+KE +IG G FG V GRL + VAIK
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 712 AMALKSFEAECEVMKNIRHRN--HVKRISSCSNE--------DFKALDC-LHSTNCSLNI 760
+ F E +M H N H++ + + + ALD L + +
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFTV 144
Query: 761 FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810
+ ++ +A+ + YL +H DL +N+ DFG+ R++ D
Sbjct: 145 IQLVGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA 201
Query: 811 IQTET--LVTIGYMAP 824
+ T T + + + AP
Sbjct: 202 VYTTTGGKIPVRWTAP 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 18 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG +LL + E V I +M
Sbjct: 137 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 823 A 823
A
Sbjct: 194 A 194
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 74/181 (40%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVF-----HQNCAMALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G +V I V A K E
Sbjct: 45 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAY 103
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 163
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 164 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 220
Query: 823 A 823
A
Sbjct: 221 A 221
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 86/197 (43%), Gaps = 31/197 (15%)
Query: 656 GGKSKTLRRFSYQDLFRATEK---FSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNC 711
GG++ +L+ +LF + FS IG GSFG+VY R + + VAIK +
Sbjct: 32 GGRAGSLKDPDVAELFFKDDPEKLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSG 91
Query: 712 AMALKSFE---AECEVMKNIRHRNHVKRISSCSNEDFKAL----DCLHSTNCSLNIFDKL 764
+ + ++ E ++ +RH N ++ C + A CL S + L + K
Sbjct: 92 KQSNEKWQDIIKEVRFLQKLRHPNTIQ-YRGCYLREHTAWLVMEYCLGSASDLLEVHKKP 150
Query: 765 NIMIDVAS----ALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810
+++A+ AL+ L + HS +IH D+K N+ DFG ++
Sbjct: 151 LQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXF 210
Query: 811 IQTETLVTIGYMAPGLL 827
+ T +MAP ++
Sbjct: 211 VGTPY-----WMAPEVI 222
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 32/172 (18%)
Query: 681 NLIGVGSFGSVY--KGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV--KR 736
++G G+F V+ K RL G A+K ++ A S E E V+K I+H N V +
Sbjct: 15 EVLGSGAFSEVFLVKQRL-TGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLED 73
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIF--------DKLNIMIDVASALEYLHFSHSTPVIHC 788
I + + + + I D ++ V SA++YLH ++H
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH---ENGIVHR 130
Query: 789 DLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
DLKP+N+ DFG+ ++ +++ I + T GY+AP +L
Sbjct: 131 DLKPENLLYLTPEENSKIMITDFGLSKM---EQNGIMSTACGTPGYVAPEVL 179
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 81
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 197
Query: 825 GLL 827
++
Sbjct: 198 EIM 200
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG +LL + E V I +M
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 823 A 823
A
Sbjct: 189 A 189
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG +LL + E V I +M
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 823 A 823
A
Sbjct: 187 A 187
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 43/163 (26%), Positives = 66/163 (40%), Gaps = 25/163 (15%)
Query: 683 IGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN 742
+G G FG V G+ +VA+K+ + +M+ F E + M + H VK CS
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 743 E-------DFKALDC----LHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLK 791
E ++ + C L S L L + DV + +L SH IH DL
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE-SHQ--FIHRDLA 131
Query: 792 PKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+N V DFG+ R + D+ + T + + AP
Sbjct: 132 ARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAP 174
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH 730
R F + ++G G+FG V K R D AIK ++ L + +E ++ ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNH 61
Query: 731 -------------RNHVKRISSCSN-----------EDFKALDCLHSTNCSLNIFDKLNI 766
RN VK +++ E+ D +HS N + + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 767 MIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802
+ AL Y+H S +IH DLKP N+F DFG+ +
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + D+G+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 672 RATEKFSKENLIGVGSFGSVYK--GRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKN-- 727
R T +F + IG G FGSV+K RL DG AIK + A ++ A EV +
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 62
Query: 728 IRHRNHVKRISSCSNEDFKAL------------DCLHSTNCSLNIFDKL---NIMIDVAS 772
+ +HV R S ED L D + ++ F + ++++ V
Sbjct: 63 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 122
Query: 773 ALEYLHFSHSTPVIHCDLKPKNVF 796
L Y+H S ++H D+KP N+F
Sbjct: 123 GLRYIH---SMSLVHMDIKPSNIF 143
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 80/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLCR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 672 RATEKFSKENLIGVGSFGSVYK--GRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKN-- 727
R T +F + IG G FGSV+K RL DG AIK + A ++ A EV +
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 66
Query: 728 IRHRNHVKRISSCSNEDFKAL------------DCLHSTNCSLNIFDKL---NIMIDVAS 772
+ +HV R S ED L D + ++ F + ++++ V
Sbjct: 67 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 126
Query: 773 ALEYLHFSHSTPVIHCDLKPKNVF 796
L Y+H S ++H D+KP N+F
Sbjct: 127 GLRYIH---SMSLVHMDIKPSNIF 147
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T+ T+ Y+ P ++
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 179
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 33/177 (18%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDG--IEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
++ EN IG GS+G V K + G I A K + + F+ E E+MK++ H N +
Sbjct: 11 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 735 KRISSCSNEDFKALDCLHSTNCSL-------NIF---DKLNIMIDVASALEYLHFSHSTP 784
+ + + L T L +F D IM DV SA+ Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY---CHKLN 126
Query: 785 VIHCDLKPKN-------------VFDFGI-GRLLTGDRSMIQTETLVTIGYMAPGLL 827
V H DLKP+N + DFG+ R G M++T+ + T Y++P +L
Sbjct: 127 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTK-VGTPYYVSPQVL 180
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 77/177 (43%), Gaps = 33/177 (18%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDG--IEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734
++ EN IG GS+G V K + G I A K + + F+ E E+MK++ H N +
Sbjct: 28 YTLENTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 735 KRISSCSNEDFKALDCLHSTNCSL-------NIF---DKLNIMIDVASALEYLHFSHSTP 784
+ + + L T L +F D IM DV SA+ Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY---CHKLN 143
Query: 785 VIHCDLKPKN-------------VFDFGI-GRLLTGDRSMIQTETLVTIGYMAPGLL 827
V H DLKP+N + DFG+ R G M++T+ + T Y++P +L
Sbjct: 144 VAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG--KMMRTK-VGTPYYVSPQVL 197
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 67/166 (40%), Gaps = 39/166 (23%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH 730
R F + ++G G+FG V K R D AIK ++ L + +E ++ ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNH 61
Query: 731 -------------RNHVKRISSCSN-----------EDFKALDCLHSTNCSLNIFDKLNI 766
RN VK +++ E+ D +HS N + + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL 121
Query: 767 MIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802
+ AL Y+H S +IH DLKP N+F DFG+ +
Sbjct: 122 FRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 672 RATEKFSKENLIGVGSFGSVYK--GRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKN-- 727
R T +F + IG G FGSV+K RL DG AIK + A ++ A EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 728 IRHRNHVKRISSCSNEDFKAL------------DCLHSTNCSLNIFDKL---NIMIDVAS 772
+ +HV R S ED L D + ++ F + ++++ V
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 773 ALEYLHFSHSTPVIHCDLKPKNVF 796
L Y+H S ++H D+KP N+F
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNIF 145
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T+ T+ Y+ P ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 178
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 69/182 (37%), Gaps = 43/182 (23%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
+G G+FG V+ + D I VA+K A K F E E++ N++H + VK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIF-----------------------DKLNIMIDVASA 773
C D + + + LN F L+I +A+
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR-LLTGDRSMIQTETLVTIGYM 822
+ YL H +H DL +N DFG+ R + + D + T++ I +M
Sbjct: 141 MVYLASQH---FVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWM 197
Query: 823 AP 824
P
Sbjct: 198 PP 199
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 15 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 73
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 133
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG +LL + E V I +M
Sbjct: 134 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 190
Query: 823 A 823
A
Sbjct: 191 A 191
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG +LL + E V I +M
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 823 A 823
A
Sbjct: 189 A 189
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 41/81 (50%), Gaps = 22/81 (27%)
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNV---------------FDFGIGRLLTGDRSM 810
++ DVASAL++LH + + H DLKP+N+ FD G G L GD S
Sbjct: 116 VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172
Query: 811 IQTETLVT----IGYMAPGLL 827
I T L+T YMAP ++
Sbjct: 173 ISTPELLTPCGSAEYMAPEVV 193
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T+ T+ Y+ P ++
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 183
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++ G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 137 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 823 A 823
A
Sbjct: 194 A 194
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 71
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 187
Query: 825 GLL 827
++
Sbjct: 188 EIM 190
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 36 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 94
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 95 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 154
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 155 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 210
Query: 825 GLL 827
++
Sbjct: 211 EIM 213
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++ G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 11 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 129
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 130 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 186
Query: 823 A 823
A
Sbjct: 187 A 187
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 76/198 (38%), Gaps = 40/198 (20%)
Query: 665 FSYQDLFRATEKFSKE------NLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMAL--- 715
FS+ +L T F + N G G FG VYKG +++ VA+K +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITTEEL 64
Query: 716 -KSFEAECEVMKNIRHRNHVKRISSCSNED--------------FKALDCLHSTNCSLNI 760
+ F+ E +V +H N V+ + S+ D L CL T L+
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTP-PLSW 123
Query: 761 FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810
+ I A+ + +LH +H IH D+K N+ DFG+ R
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 811 IQTETLV-TIGYMAPGLL 827
+ +V T Y AP L
Sbjct: 181 VXXSRIVGTTAYXAPEAL 198
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 13 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 71
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 131
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG +LL + E V I +M
Sbjct: 132 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWM 188
Query: 823 A 823
A
Sbjct: 189 A 189
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 64/144 (44%), Gaps = 23/144 (15%)
Query: 672 RATEKFSKENLIGVGSFGSVYK--GRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKN-- 727
R T +F + IG G FGSV+K RL DG AIK + A ++ A EV +
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRL-DGCIYAIKRSKKPLAGSVDEQNALREVYAHAV 64
Query: 728 IRHRNHVKRISSCSNEDFKAL------------DCLHSTNCSLNIFDKL---NIMIDVAS 772
+ +HV R S ED L D + ++ F + ++++ V
Sbjct: 65 LGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGR 124
Query: 773 ALEYLHFSHSTPVIHCDLKPKNVF 796
L Y+H S ++H D+KP N+F
Sbjct: 125 GLRYIH---SMSLVHMDIKPSNIF 145
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 40 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 98
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 99 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 158
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M + T Y AP
Sbjct: 159 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--XGYVATRWYRAP 214
Query: 825 GLL 827
++
Sbjct: 215 EIM 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 95
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 211
Query: 825 GLL 827
++
Sbjct: 212 EIM 214
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 70/176 (39%), Gaps = 32/176 (18%)
Query: 678 SKENLIGVGSFGSVYKGRLHDG-----IEVAIKVFHQNCAMALK-SFEAECEVMKNIRHR 731
+++ +IG G FG VYKG L + VAIK + F E +M H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 732 NHVKRISSCSNE----------DFKALD-CLHSTNCSLNIFDKLNIMIDVASALEYLHFS 780
N ++ S + ALD L + ++ + ++ +A+ ++YL
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYL--- 163
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET--LVTIGYMAP 824
+ +H DL +N+ DFG+ R+L D T + + I + AP
Sbjct: 164 ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAP 219
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 80/197 (40%), Gaps = 40/197 (20%)
Query: 665 FSYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN- 710
F+++D +A +F+KE +IGVG FG V GRL I VAIK
Sbjct: 10 FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGY 69
Query: 711 CAMALKSFEAECEVMKNIRHRN--HVKR-ISSCS-----NEDFK--ALDC-LHSTNCSLN 759
+ F +E +M H N H++ ++ C E + +LD L +
Sbjct: 70 TDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFT 129
Query: 760 IFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809
+ + ++ + S ++YL +H DL +N+ DFG+ R+L D
Sbjct: 130 VIQLVGMLRGIGSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPE 186
Query: 810 MIQTET--LVTIGYMAP 824
T + I + AP
Sbjct: 187 AAYTTRGGKIPIRWTAP 203
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 65/167 (38%), Gaps = 23/167 (13%)
Query: 680 ENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISS 739
E ++G G+FG V K + +VAIK K+F E + + H N VK +
Sbjct: 14 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 70
Query: 740 CSN---------EDFKALDCLHSTNCSLNIFDKLNIM---IDVASALEYLHFSHSTPVIH 787
C N E + LH L + + M + + + YLH +IH
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 129
Query: 788 CDLKPKNVFDFGIGRLLT----GDRSMIQTETLVTIG---YMAPGLL 827
DLKP N+ G +L G IQT G +MAP +
Sbjct: 130 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVF 176
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 77/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 77
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L C H +N + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQHLSNDHICYF---- 133
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 134 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 190 EYVATRWYRAPEIM 203
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T T+ Y+ P ++
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 204
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 65/167 (38%), Gaps = 23/167 (13%)
Query: 680 ENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISS 739
E ++G G+FG V K + +VAIK K+F E + + H N VK +
Sbjct: 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESESER--KAFIVELRQLSRVNHPNIVKLYGA 69
Query: 740 CSN---------EDFKALDCLHSTNCSLNIFDKLNIM---IDVASALEYLHFSHSTPVIH 787
C N E + LH L + + M + + + YLH +IH
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIH 128
Query: 788 CDLKPKNVFDFGIGRLLT----GDRSMIQTETLVTIG---YMAPGLL 827
DLKP N+ G +L G IQT G +MAP +
Sbjct: 129 RDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVF 175
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T T+ Y+ P ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 178
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIAD 152
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 662 LRRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQ--NCAMALKSF 718
L+ S+ F +++ IG G++G V R G +VAIK + K
Sbjct: 42 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 101
Query: 719 EAECEVMKNIRHRN--HVKRI--SSCSNEDFKA----LDC----LHSTNCSLNIFDKLNI 766
E +++K+ +H N +K I + +FK+ LD LH S ++
Sbjct: 102 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 161
Query: 767 MIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLL---TGDRSMIQT 813
+ L L + HS VIH DLKP N+ DFG+ R L + T
Sbjct: 162 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 221
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP L+
Sbjct: 222 EYVATRWYRAPELM 235
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 40.0 bits (92), Expect = 0.005, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 69/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T+ T+ Y+ P ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMI 178
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 22/140 (15%)
Query: 681 NLIGVGSFGSV---YKGRLHDGIEVAI----KVFHQNCAMALKSFEAECEVMKNIRHRNH 733
+IG GSFG V Y ++H + + + K FH+ A ++ E ++ N
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH----LRKQDKDNT 158
Query: 734 VKRISSCSNEDFKALDCLHSTNCSLNIFDKLN-----------IMIDVASALEYLHFSHS 782
+ I N F+ C+ S+N+++ + + S L+ L H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 783 TPVIHCDLKPKNVFDFGIGR 802
+IHCDLKP+N+ GR
Sbjct: 219 NRIIHCDLKPENILLKQQGR 238
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 69/177 (38%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+++D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+GR+L D
Sbjct: 147 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDD 200
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDG-IEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + +A+KV + A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 126 SKKVIHRDIKPENLLLGSAGELKIAD 151
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 76/170 (44%), Gaps = 18/170 (10%)
Query: 675 EKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNH 733
+K+++ IG G+ G+VY + G EVAI+ + + E VM+ ++ N
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 734 VKRISS--CSNEDFKALDCLHSTN----CSLNIFDKLNIMIDVASALEYLHFSHSTPVIH 787
V + S +E + ++ L + + D+ I L+ L F HS VIH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 788 CDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
D+K N+ DFG +T ++S ++E + T +MAP ++
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSEMVGTPYWMAPEVV 188
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 71
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTDDHVQFLIYQIL 131
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 187
Query: 825 GLL 827
++
Sbjct: 188 EIM 190
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 59/140 (42%), Gaps = 22/140 (15%)
Query: 681 NLIGVGSFGSV---YKGRLHDGIEVAI----KVFHQNCAMALKSFEAECEVMKNIRHRNH 733
+IG GSFG V Y ++H + + + K FH+ A ++ E ++ N
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH----LRKQDKDNT 158
Query: 734 VKRISSCSNEDFKALDCLHSTNCSLNIFDKLN-----------IMIDVASALEYLHFSHS 782
+ I N F+ C+ S+N+++ + + S L+ L H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 783 TPVIHCDLKPKNVFDFGIGR 802
+IHCDLKP+N+ GR
Sbjct: 219 NRIIHCDLKPENILLKQQGR 238
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++ G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 18 ILKETE-FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 76
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK----------LNIMIDVASA 773
VM ++ + + + + C + + L C L+ + LN + +A
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKG 136
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 137 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 193
Query: 823 A 823
A
Sbjct: 194 A 194
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 79/194 (40%), Gaps = 28/194 (14%)
Query: 662 LRRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQ--NCAMALKSF 718
L+ S+ F +++ IG G++G V R G +VAIK + K
Sbjct: 41 LKARSFDVTFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRT 100
Query: 719 EAECEVMKNIRHRN--HVKRI--SSCSNEDFKA----LDC----LHSTNCSLNIFDKLNI 766
E +++K+ +H N +K I + +FK+ LD LH S ++
Sbjct: 101 LRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHV 160
Query: 767 MIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLL---TGDRSMIQT 813
+ L L + HS VIH DLKP N+ DFG+ R L + T
Sbjct: 161 RYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMT 220
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP L+
Sbjct: 221 EYVATRWYRAPELM 234
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 32 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 91
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 92 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 151
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 152 SKRVIHRDIKPENLLLGSAGELKIAD 177
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 7 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 66
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 67 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 126
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 127 SKRVIHRDIKPENLLLGSAGELKIAD 152
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 27 IWEVPERYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 85
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 86 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 145
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 146 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 201
Query: 825 GLL 827
++
Sbjct: 202 EIM 204
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 128 SKRVIHRDIKPENLLLGSAGELKIAD 153
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 23 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 81
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 82 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 141
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M T + T Y AP
Sbjct: 142 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--TGYVATRWYRAP 197
Query: 825 GLL 827
++
Sbjct: 198 EIM 200
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 770 VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGD-RSMIQTETLV- 817
+A A + L+FSH +IH D+KP N V DFGI R + S+ QT ++
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 818 TIGYMAP 824
T Y++P
Sbjct: 182 TAQYLSP 188
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 770 VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGD-RSMIQTETLV- 817
+A A + L+FSH +IH D+KP N V DFGI R + S+ QT ++
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 818 TIGYMAP 824
T Y++P
Sbjct: 182 TAQYLSP 188
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 770 VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGD-RSMIQTETLV- 817
+A A + L+FSH +IH D+KP N V DFGI R + S+ QT ++
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 818 TIGYMAP 824
T Y++P
Sbjct: 182 TAQYLSP 188
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 770 VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGD-RSMIQTETLV- 817
+A A + L+FSH +IH D+KP N V DFGI R + S+ QT ++
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 181
Query: 818 TIGYMAP 824
T Y++P
Sbjct: 182 TAQYLSP 188
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 39.3 bits (90), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 77/175 (44%), Gaps = 35/175 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHVK-RIS 738
+IG GSFG V++ +L + EVAIK Q+ K F+ E ++M+ ++H N V +
Sbjct: 46 KVIGNGSFGVVFQAKLVESDEVAIKKVLQD-----KRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 739 SCSNEDFK-------ALDCLHSTNCSLNI-FDKLN-------IMIDVASALEYLHFSHST 783
SN D K L+ + T + + KL I + + L L + HS
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI 160
Query: 784 PVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
+ H D+KP+N+ DFG ++L + + + Y AP L+
Sbjct: 161 GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVS--XICSRYYRAPELI 213
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 130
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 770 VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGD-RSMIQTETLV- 817
+A A + L+FSH +IH D+KP N V DFGI R + S+ QT ++
Sbjct: 139 IADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIG 198
Query: 818 TIGYMAP 824
T Y++P
Sbjct: 199 TAQYLSP 205
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 23 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 82
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 83 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 142
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T T+ Y+ P ++
Sbjct: 143 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 195
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 80/193 (41%), Gaps = 46/193 (23%)
Query: 669 DLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVA----IKVFHQNCAMALKSFEA--EC 722
D+ +++ K + +G G F +VYK R + ++ IK+ H++ A + A E
Sbjct: 4 DVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREI 63
Query: 723 EVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVA----------- 771
++++ + H N + + + H +N SL +FD + ++V
Sbjct: 64 KLLQELSHPNIIGLLDAFG----------HKSNISL-VFDFMETDLEVIIKDNSLVLTPS 112
Query: 772 -------SALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE 814
L+ L + H ++H DLKP N+ DFG+ + G +
Sbjct: 113 HIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSF-GSPNRAYXH 171
Query: 815 TLVTIGYMAPGLL 827
+VT Y AP LL
Sbjct: 172 QVVTRWYRAPELL 184
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 39.3 bits (90), Expect = 0.010, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T T+ Y+ P ++
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPEMI 178
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 770 VASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGD-RSMIQTETLV- 817
+A A + L+FSH +IH D+KP N V DFGI R + S+ QT ++
Sbjct: 122 IADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIG 181
Query: 818 TIGYMAP 824
T Y++P
Sbjct: 182 TAQYLSP 188
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 129
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T T+ Y+ P ++
Sbjct: 130 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 182
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 30/160 (18%)
Query: 671 FRATEKFSKENLIGVGSFG-SVYKGRLHDGIEVAIKVFHQNCAMALKSFEA---ECEVMK 726
F++ EK+ + IG GSFG ++ DG + IK + + M+ K E E V+
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINIS-RMSSKEREESRREVAVLA 78
Query: 727 NIRHRNHVKRISSCSNE-------DF-KALDCLHSTNCSLNIFDK----LNIMIDVASAL 774
N++H N V+ S D+ + D N + + L+ + + AL
Sbjct: 79 NMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL 138
Query: 775 EYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLL 804
+++H ++H D+K +N+F DFGI R+L
Sbjct: 139 KHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 124
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T T+ Y+ P ++
Sbjct: 125 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 177
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.9 bits (89), Expect = 0.010, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T T+ Y+ P ++
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 181
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 66/177 (37%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+Y+D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 712 AMALKSFEAECEVMKNIRHRNHVK-----------RISSCSNEDFKALDCLHSTNCSLNI 760
+ F E +M H N ++ I + E+ L + +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 761 FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 147 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 35/183 (19%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 11 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 69
Query: 724 VMKNIRHRNHVKRISSCSNEDFKALDCL------------HSTNCSLNIFDKLNIMIDVA 771
VM ++ + + + + C + + L H N LN + +A
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYL--LNWCVQIA 127
Query: 772 SALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIG 820
+ YL ++H DL +NV DFG+ +LL + E V I
Sbjct: 128 KGMNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIK 184
Query: 821 YMA 823
+MA
Sbjct: 185 WMA 187
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + D G+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+Y+D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 147 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+Y+D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 27 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 147 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + FG+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.9 bits (89), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 77/172 (44%), Gaps = 34/172 (19%)
Query: 683 IGVGSFGSV---YKGRLHDGIEVAIKVFH---QNCAMALKSFEAECEVMKNIRHRNHVKR 736
+G G++G+V GR G +VAIK + Q+ A +++ E ++K++RH N +
Sbjct: 33 VGSGAYGAVCSAVDGRT--GAKVAIKKLYRPFQSELFAKRAYR-ELRLLKHMRHENVIGL 89
Query: 737 ISSCSNE-------DFKALDCLHSTNC-SLNIFDKL---NIMIDVASALEYLHFSHSTPV 785
+ + + DF + T+ L +KL I V L+ L + H+ +
Sbjct: 90 LDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAGI 149
Query: 786 IHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
IH DLKP N + DFG+ R D M +VT Y AP ++
Sbjct: 150 IHRDLKPGNLAVNEDCELKILDFGLAR--QADSEMXG--XVVTRWYRAPEVI 197
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 22/81 (27%)
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGR--LLTGDRSM 810
++ DVASAL++LH + + H DLKP+N+ DFG+G L GD S
Sbjct: 116 VVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSP 172
Query: 811 IQTETLVT----IGYMAPGLL 827
I T L+T YMAP ++
Sbjct: 173 ISTPELLTPCGSAEYMAPEVV 193
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 34/149 (22%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGRLHDGIE---VAIKVFHQNCAMALKSFEAECEVMKNI 728
+ +++ ++LIG GSFG V K +D +E VAIK+ +N L + E +++ +
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKA--YDRVEQEWVAIKII-KNKKAFLNQAQIEVRLLELM 107
Query: 729 RHRN--------HVKRISSCSNE--------DFKALDCLHSTN---CSLNIFDKLNIMID 769
+ H+KR N + D L +TN SLN+ K
Sbjct: 108 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF--AQQ 165
Query: 770 VASALEYLHFSHSTP---VIHCDLKPKNV 795
+ +AL +L +TP +IHCDLKP+N+
Sbjct: 166 MCTALLFL----ATPELSIIHCDLKPENI 190
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G+FG VYK + + + A KV L+ + E +++ + H N VK + +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 742 NE-------DFKALDCLHSTNCSLNI-FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPK 793
E +F A + + L + I + L+ L++ H +IH DLK
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+ DFG+ T R++ + ++ + T +MAP ++
Sbjct: 165 NILFTLDGDIKLADFGVSAKNT--RTIQRRDSFIGTPYWMAPEVV 207
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 34/149 (22%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGRLHDGIE---VAIKVFHQNCAMALKSFEAECEVMKNI 728
+ +++ ++LIG GSFG V K +D +E VAIK+ +N L + E +++ +
Sbjct: 51 KWMDRYEIDSLIGKGSFGQVVKA--YDRVEQEWVAIKII-KNKKAFLNQAQIEVRLLELM 107
Query: 729 RHRN--------HVKRISSCSNE--------DFKALDCLHSTN---CSLNIFDKLNIMID 769
+ H+KR N + D L +TN SLN+ K
Sbjct: 108 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF--AQQ 165
Query: 770 VASALEYLHFSHSTP---VIHCDLKPKNV 795
+ +AL +L +TP +IHCDLKP+N+
Sbjct: 166 MCTALLFL----ATPELSIIHCDLKPENI 190
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + D G+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 37 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 95
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 96 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 155
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R D M + T Y AP
Sbjct: 156 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR--HTDDEM--XGXVATRWYRAP 211
Query: 825 GLL 827
++
Sbjct: 212 EIM 214
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 40/196 (20%)
Query: 657 GKSKTLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNC 711
G K L R +F+ TE K ++G G FG+V+KG + +G I V IKV
Sbjct: 1 GAMKVLAR-----IFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS 54
Query: 712 AMALKSFEAECEVMKNIRHRNH---VKRISSCSNEDFK----------ALDCLHSTNCSL 758
+SF+A + M I +H V+ + C + LD + +L
Sbjct: 55 GR--QSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGAL 112
Query: 759 NIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLL-TGD 807
LN + +A + YL H ++H +L +NV DFG+ LL D
Sbjct: 113 GPQLLLNWGVQIAKGMYYLE-EHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169
Query: 808 RSMIQTETLVTIGYMA 823
+ ++ +E I +MA
Sbjct: 170 KQLLYSEAKTPIKWMA 185
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 66/166 (39%), Gaps = 39/166 (23%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH 730
R F + ++G G+FG V K R D AIK ++ L + +E ++ ++ H
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVXLLASLNH 61
Query: 731 -------------RNHVKRISSCSN-----------EDFKALDCLHSTNCSLNIFDKLNI 766
RN VK ++ E+ D +HS N + + +
Sbjct: 62 QYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 767 MIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802
+ AL Y+H S +IH +LKP N+F DFG+ +
Sbjct: 122 FRQILEALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAK 164
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCA-MALKSFEAECE 723
+ + TE F K ++G G+FG+VYKG + +G I VAIK + + A K E
Sbjct: 12 ILKETE-FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAY 70
Query: 724 VMKNIRHRNHVKRISSCSNEDFK----------ALDCLHSTNCSLNIFDKLNIMIDVASA 773
VM ++ + + + + C + LD + ++ LN + +A
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKG 130
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-TLVTIGYM 822
+ YL ++H DL +NV DFG+ +LL + E V I +M
Sbjct: 131 MNYL---EDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 187
Query: 823 A 823
A
Sbjct: 188 A 188
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVVAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-LNIMIDVA---SALEYLHFS 780
MK + H+N + ++ + + K+L+ + + D L+ +I + + YL +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 781 --------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYM 822
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 823 APGLL 827
AP ++
Sbjct: 193 APEVI 197
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+Y+D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 25 TYEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 84
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 85 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 144
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 145 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 198
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 35/183 (19%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDG----IEVAIKVFHQNCAMALKSFEAECEV 724
+F+ TE K ++G G FG+V+KG + +G I V IKV +SF+A +
Sbjct: 27 IFKETE-LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGR--QSFQAVTDH 83
Query: 725 MKNIRHRNH---VKRISSCSNEDFK----------ALDCLHSTNCSLNIFDKLNIMIDVA 771
M I +H V+ + C + LD + +L LN + +A
Sbjct: 84 MLAIGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIA 143
Query: 772 SALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLL-TGDRSMIQTETLVTIG 820
+ YL H ++H +L +NV DFG+ LL D+ ++ +E I
Sbjct: 144 KGMYYLE-EHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK 200
Query: 821 YMA 823
+MA
Sbjct: 201 WMA 203
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 38.5 bits (88), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 13 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 71
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 72 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 131
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R + + + T Y AP
Sbjct: 132 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF----VATRWYRAP 187
Query: 825 GLL 827
++
Sbjct: 188 EIM 190
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 125
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 126 SKRVIHRDIKPENLLLGSAGELKIAD 151
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 129 SKRVIHRDIKPENLLLGSAGELKIAD 154
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 38.5 bits (88), Expect = 0.015, Method: Composition-based stats.
Identities = 41/173 (23%), Positives = 68/173 (39%), Gaps = 18/173 (10%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 122
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
S VIH D+KP+N+ G L D S +T T+ Y+ P ++
Sbjct: 123 SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 175
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R + + + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF----VATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 34/149 (22%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGRLHDGIE---VAIKVFHQNCAMALKSFEAECEVMKNI 728
+ +++ ++LIG GSFG V K +D +E VAIK+ +N L + E +++ +
Sbjct: 32 KWMDRYEIDSLIGKGSFGQVVKA--YDRVEQEWVAIKII-KNKKAFLNQAQIEVRLLELM 88
Query: 729 RHRN--------HVKRISSCSNE--------DFKALDCLHSTN---CSLNIFDKLNIMID 769
+ H+KR N + D L +TN SLN+ K
Sbjct: 89 NKHDTEMKYYIVHLKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF--AQQ 146
Query: 770 VASALEYLHFSHSTP---VIHCDLKPKNV 795
+ +AL +L +TP +IHCDLKP+N+
Sbjct: 147 MCTALLFL----ATPELSIIHCDLKPENI 171
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 38/180 (21%)
Query: 665 FSYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN- 710
F+++D A +F+KE +IG G FG V G L I VAIK
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 711 CAMALKSFEAECEVMKNIRHRN--HVKRISSCSNE--------DFKALDC-LHSTNCSLN 759
+ F +E +M H N H++ + + S + +LD L +
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 760 IFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809
+ + ++ +A+ ++YL +H DL +N+ DFG+ R L D S
Sbjct: 134 VIQLVGMLRGIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTS 190
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G+ VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + D G+ R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGGLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 84/207 (40%), Gaps = 29/207 (14%)
Query: 138 IPPSIF-TMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHY 196
+P F + KL+ L +DN+L + + L ++ + + +KL LP+ + + L
Sbjct: 52 LPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVN 110
Query: 197 LKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEI-SNLTILRKISLRNNKL 255
L L L +N P +L L+LG+ +L ++PK + LT L+++ L NN+L
Sbjct: 111 LAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPKGVFDKLTSLKELRLYNNQL 169
Query: 256 RGEIPHEIGYLPXXXXXXXXXXXXXXXXPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSL 315
+ P F+ T K LDN+ L G SL
Sbjct: 170 K-------------------------RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSL 204
Query: 316 PNVERLNLGLNRFSGTIPSFITNASKL 342
++ L L N + T I A L
Sbjct: 205 EKLKMLQLQENPWDCTCNGIIYMAKWL 231
Score = 38.1 bits (87), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 69/168 (41%), Gaps = 6/168 (3%)
Query: 412 EGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSC 471
+ NKL+ F RL KL+ LYL NKL L L TL + NK
Sbjct: 45 QSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGV 104
Query: 472 LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINL 531
L +L L N+L S+ P F +L + + L N L SL G + +
Sbjct: 105 FDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ---SLPKGVFDKLTSLKE 161
Query: 532 SR--NNFSGDIPSTIGD-LKDLQNISLACNGLEGLIPESFGYLTELNL 576
R NN +P D L +L+ + L N L+ + +F L +L +
Sbjct: 162 LRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKM 209
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 229 KKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPXXXXXXXXXXXXXXXXPAAIF 288
KKL+ AIP I T +K+ L++NKL +P + + PA IF
Sbjct: 26 KKLT-AIPSNIPADT--KKLDLQSNKL-SSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIF 81
Query: 289 -NMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDM 347
+ ++ +++ DN L + +G+ L N+ L L N+ P + +KL YL +
Sbjct: 82 KELKNLETLWVTDNKL-QALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140
Query: 348 GTNSFSGI 355
G N +
Sbjct: 141 GYNELQSL 148
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 40/102 (39%)
Query: 412 EGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSC 471
+ N+L P F L KL L L +N+L L L L L N+
Sbjct: 117 DRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGA 176
Query: 472 LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLD 513
LT L++ L +N+L V F +L+ + L N D
Sbjct: 177 FDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWD 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DFG+ R + + + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGF----VATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 58/140 (41%), Gaps = 22/140 (15%)
Query: 681 NLIGVGSFGSV---YKGRLHDGIEVAI----KVFHQNCAMALKSFEAECEVMKNIRHRNH 733
+IG G FG V Y ++H + + + K FH+ A ++ E ++ N
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEH----LRKQDKDNT 158
Query: 734 VKRISSCSNEDFKALDCLHSTNCSLNIFDKLN-----------IMIDVASALEYLHFSHS 782
+ I N F+ C+ S+N+++ + + S L+ L H
Sbjct: 159 MNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 783 TPVIHCDLKPKNVFDFGIGR 802
+IHCDLKP+N+ GR
Sbjct: 219 NRIIHCDLKPENILLKQQGR 238
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 78/202 (38%), Gaps = 27/202 (13%)
Query: 648 ALKYKSIRGGKSKTLRRFSYQDLFRATEK-FSKENLIGVGSFGSVYKGRLHDGIEVAIKV 706
+L+ +R + L++ L + E+ F +G GS+GSVYK +H + +
Sbjct: 1 SLETVQLRNPPRRQLKKLDEDSLTKQPEEVFDVLEKLGEGSYGSVYKA-IHKETGQIVAI 59
Query: 707 FHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC-SNEDFKAL----------DCLHSTN 755
L+ E +M+ + VK S N D + D + N
Sbjct: 60 KQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRN 119
Query: 756 CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLT 805
+L + I+ LEYLHF IH D+K N+ DFG+ LT
Sbjct: 120 KTLTEDEIATILQSTLKGLEYLHFMRK---IHRDIKAGNILLNTEGHAKLADFGVAGQLT 176
Query: 806 GDRSMIQTETLVTIGYMAPGLL 827
D + + T +MAP ++
Sbjct: 177 -DXMAKRNXVIGTPFWMAPEVI 197
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.1 bits (87), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 75/173 (43%), Gaps = 28/173 (16%)
Query: 677 FSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMALKSFE---AECEVMKNIRHRN 732
FS IG GSFG+VY R + + VAIK + + + ++ E ++ +RH N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 733 HVKRISSCSNEDFKAL----DCLHSTNCSLNIFDKLNIMIDVAS----ALEYLHFSHSTP 784
++ C + A CL S + L + K +++A+ AL+ L + HS
Sbjct: 77 TIQ-YRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135
Query: 785 VIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
+IH D+K N+ DFG ++ + T +MAP ++
Sbjct: 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPY-----WMAPEVI 183
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 38.1 bits (87), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G+FG VYK + + + A KV L+ + E +++ + H N VK + +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 742 NE-------DFKALDCLHSTNCSLNI-FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPK 793
E +F A + + L + I + L+ L++ H +IH DLK
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+ DFG+ T R + + ++ + T +MAP ++
Sbjct: 165 NILFTLDGDIKLADFGVSAKNT--RXIQRRDSFIGTPYWMAPEVV 207
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFH--QNCAMALKSFEAECEVMK 726
++ + F ++L+G G++G V E VAIK AL++ E +++K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 727 NIRHRN-----HVKRISSCSN-EDFKALDCLHSTN----CSLNIFDKLNIMIDVASALEY 776
+ +H N +++R S N + + L T+ S + +I + L
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 777 LHFSHSTPVIHCDLKPKN----------VFDFGIGRLL----------TGDRSMIQTETL 816
+ H + VIH DLKP N V DFG+ R++ TG +S + TE +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEXV 183
Query: 817 VTIGYMAPGLL 827
T Y AP ++
Sbjct: 184 ATRWYRAPEVM 194
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 75/185 (40%), Gaps = 32/185 (17%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECEV 724
F ++++ IG G++G V H VAIK HQ C L+ E ++
Sbjct: 39 FDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLR----EIQI 94
Query: 725 MKNIRHRN-----HVKRISSCS--NEDFKALDCLHSTNCSLNIFDKL---NIMIDVASAL 774
+ RH N + R S+ + + D + + L +L +I + L
Sbjct: 95 LLRFRHENVIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSNDHICYFLYQIL 154
Query: 775 EYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLL--TGDRSMIQTETLVTIGYM 822
L + HS V+H DLKP N+ DFG+ R+ D + TE + T Y
Sbjct: 155 RGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYR 214
Query: 823 APGLL 827
AP ++
Sbjct: 215 APEIM 219
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 11/142 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 8 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 67
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 68 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 127
Query: 782 STPVIHCDLKPKNVFDFGIGRL 803
S VIH D+KP+N+ G L
Sbjct: 128 SKRVIHRDIKPENLLLGSAGEL 149
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 78/198 (39%), Gaps = 44/198 (22%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+Y+D +A +F+KE +IG G FG V GRL + VAIK
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 712 AMALKSFEAECEVMKNIRHRN--HVKRISSCSNEDFKALDCLHSTNCSLNIFDKLN---- 765
+ F E +M H N H++ + + S + + N SL+ F K N
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME--NGSLDTFLKKNDGQF 121
Query: 766 -------IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808
++ +++ ++YL +H DL +N+ DFG+ R+L D
Sbjct: 122 TVIQLVGMLRGISAGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP 178
Query: 809 SMIQTET--LVTIGYMAP 824
T + I + AP
Sbjct: 179 EAAYTTRGGKIPIRWTAP 196
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 37.7 bits (86), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNH 733
+K+++ IG G+ G+VY + G EVAI+ + + E VM+ ++ N
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 734 VKRISS--CSNEDFKALDCLHSTN----CSLNIFDKLNIMIDVASALEYLHFSHSTPVIH 787
V + S +E + ++ L + + D+ I L+ L F HS VIH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 788 CDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
D+K N+ DFG +T ++S + T+V T +MAP ++
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVV 188
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 76/184 (41%), Gaps = 39/184 (21%)
Query: 681 NLIGVGSFGSVYKGRLHDGIEVAIKVF----HQNCAMALKSFEAECEVMKNI-RHRNHVK 735
LIG G +G+VYKG L D VA+KVF QN + NI R +
Sbjct: 19 ELIGRGRYGAVYKGSL-DERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 736 RISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVAS---------ALEYLHFS-----H 781
R+++ ++ L + N SL + L+ V+S L YLH H
Sbjct: 78 RVTADGRMEY-LLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDH 136
Query: 782 STPVI-HCDLKPKNVF----------DFGIGRLLTGDRSMIQTE-------TLVTIGYMA 823
P I H DL +NV DFG+ LTG+R + E + TI YMA
Sbjct: 137 YKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196
Query: 824 PGLL 827
P +L
Sbjct: 197 PEVL 200
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 66/177 (37%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+++D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 712 AMALKSFEAECEVMKNIRHRNHVK-----------RISSCSNEDFKALDCLHSTNCSLNI 760
+ F E +M H N ++ I + E+ L + +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 146
Query: 761 FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 147 IQLVGMLRGIASGMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 37.7 bits (86), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 31/183 (16%)
Query: 676 KFSKENLIGVGSFGSVYKGRLHD-GIEVAI-KVFHQNCAMALK-SFEAECEVMKNIRHRN 732
K+ K IG G+FG V+K R G +VA+ KV +N + E ++++ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 733 HVKRISSCSNE---------------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYL 777
V I C + DF D + L F I + L L
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGR---LLTGDRSMIQTETLVTIGYMAP 824
++ H ++H D+K NV DFG+ R L + +VT+ Y P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 825 GLL 827
LL
Sbjct: 199 ELL 201
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 19/137 (13%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G+FG VYK + + G A KV L+ + E E++ H VK + +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 742 NE-------DFKALDCLHSTNCSLNI-FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPK 793
++ +F + + L+ + I + LE L+F HS +IH DLK
Sbjct: 79 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 138
Query: 794 NVF----------DFGI 800
NV DFG+
Sbjct: 139 NVLMTLEGDIRLADFGV 155
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 35/191 (18%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFH--QNCAMALKSFEAECEVMK 726
++ + F ++L+G G++G V E VAIK AL++ E +++K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 727 NIRHRN-----HVKRISSCSN-EDFKALDCLHSTN----CSLNIFDKLNIMIDVASALEY 776
+ +H N +++R S N + + L T+ S + +I + L
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 777 LHFSHSTPVIHCDLKPKN----------VFDFGIGRLL----------TGDRSMIQTETL 816
+ H + VIH DLKP N V DFG+ R++ TG +S + TE +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-TEYV 183
Query: 817 VTIGYMAPGLL 827
T Y AP ++
Sbjct: 184 ATRWYRAPEVM 194
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 37.7 bits (86), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 683 IGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVMKNIRHRNHVKRI- 737
+G G++GSV G +VAIK Q+ A +++ E ++K+++H N + +
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 108
Query: 738 -----SSCSN-EDFKALDCLHSTNCSLNI---FDKLNIMIDVASALEYLHFSHSTPVIHC 788
SS N DF + T+ + F + I V L+ L + HS V+H
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVHR 168
Query: 789 DLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
DLKP N + DFG+ R D M T +VT Y AP ++
Sbjct: 169 DLKPGNLAVNEDCELKILDFGLAR--HADAEM--TGYVVTRWYRAPEVI 213
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 60/144 (41%), Gaps = 21/144 (14%)
Query: 683 IGVGSFGSVYKG-RLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISS 739
IG GSF +VYKG +EVA + F+ E E +K ++H N V+ S
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 740 CSNEDFKALDCL---------HSTNCSLNIFDKLNIMI------DVASALEYLHFSHSTP 784
+ K C+ + L F I + + L++LH + + P
Sbjct: 94 WES-TVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLH-TRTPP 151
Query: 785 VIHCDLKPKNVFDFG-IGRLLTGD 807
+IH DLK N+F G G + GD
Sbjct: 152 IIHRDLKCDNIFITGPTGSVKIGD 175
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 31/183 (16%)
Query: 676 KFSKENLIGVGSFGSVYKGRLHD-GIEVAI-KVFHQNCAMALK-SFEAECEVMKNIRHRN 732
K+ K IG G+FG V+K R G +VA+ KV +N + E ++++ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 733 HVKRISSCSNE---------------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYL 777
V I C + DF D + L F I + L L
Sbjct: 79 VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGR---LLTGDRSMIQTETLVTIGYMAP 824
++ H ++H D+K NV DFG+ R L + +VT+ Y P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 825 GLL 827
LL
Sbjct: 199 ELL 201
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 31/183 (16%)
Query: 676 KFSKENLIGVGSFGSVYKGRLHD-GIEVAI-KVFHQNCAMALK-SFEAECEVMKNIRHRN 732
K+ K IG G+FG V+K R G +VA+ KV +N + E ++++ ++H N
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 733 HVKRISSCSNE---------------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYL 777
V I C + DF D + L F I + L L
Sbjct: 79 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 138
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGR---LLTGDRSMIQTETLVTIGYMAP 824
++ H ++H D+K NV DFG+ R L + +VT+ Y P
Sbjct: 139 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 198
Query: 825 GLL 827
LL
Sbjct: 199 ELL 201
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 75/169 (44%), Gaps = 29/169 (17%)
Query: 683 IGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVMKNIRHRNHVKRI- 737
+G G++GSV G +VAIK Q+ A +++ E ++K+++H N + +
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYR-ELLLLKHMQHENVIGLLD 90
Query: 738 -----SSCSN-EDFKALDCLHSTNCSLNI---FDKLNIMIDVASALEYLHFSHSTPVIHC 788
SS N DF + T+ + F + I V L+ L + HS V+H
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSAGVVHR 150
Query: 789 DLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
DLKP N + DFG+ R D M T +VT Y AP ++
Sbjct: 151 DLKPGNLAVNEDCELKILDFGLAR--HADAEM--TGYVVTRWYRAPEVI 195
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/179 (21%), Positives = 75/179 (41%), Gaps = 28/179 (15%)
Query: 674 TEKFSKENLIGVGSFGSVY--KGRLHDGIEVAIKVFHQNCAMALKSFEA---ECEVMKNI 728
++++ + ++G GSFG V K ++ G E A+KV + E+ E +++K +
Sbjct: 31 SDRYKGQRVLGKGSFGEVILCKDKI-TGQECAVKVISKRQVKQKTDKESLLREVQLLKQL 89
Query: 729 RHRNHVKRISSCSNEDFKAL-------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
H N +K ++ + L L S F +++ + L + + H
Sbjct: 90 DHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH 149
Query: 782 STPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
++H DLKP+N + DFG+ + M + + T Y+AP +L
Sbjct: 150 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTAYYIAPEVL 206
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 72/183 (39%), Gaps = 31/183 (16%)
Query: 676 KFSKENLIGVGSFGSVYKGRLHD-GIEVAI-KVFHQNCAMALK-SFEAECEVMKNIRHRN 732
K+ K IG G+FG V+K R G +VA+ KV +N + E ++++ ++H N
Sbjct: 18 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 77
Query: 733 HVKRISSCSNE---------------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYL 777
V I C + DF D + L F I + L L
Sbjct: 78 VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGL 137
Query: 778 HFSHSTPVIHCDLKPKNVF----------DFGIGR---LLTGDRSMIQTETLVTIGYMAP 824
++ H ++H D+K NV DFG+ R L + +VT+ Y P
Sbjct: 138 YYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPP 197
Query: 825 GLL 827
LL
Sbjct: 198 ELL 200
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 57/137 (41%), Gaps = 19/137 (13%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G+FG VYK + + G A KV L+ + E E++ H VK + +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 742 NE-------DFKALDCLHSTNCSLNI-FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPK 793
++ +F + + L+ + I + LE L+F HS +IH DLK
Sbjct: 87 HDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAG 146
Query: 794 NVF----------DFGI 800
NV DFG+
Sbjct: 147 NVLMTLEGDIRLADFGV 163
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+++D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 147 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD 200
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 37.4 bits (85), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 73
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 129
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N + DFG+ R+ D T
Sbjct: 130 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 186 EYVATRWYRAPEIM 199
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 78/192 (40%), Gaps = 39/192 (20%)
Query: 667 YQDLFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVM 725
++D+++ T + L+G G++ V L +G E A+K+ + + E E +
Sbjct: 10 FEDMYKLTSE-----LLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETL 64
Query: 726 KNIRHRNHVKRISSCSNED------FKALD----CLH-STNCSLNIFDKLNIMIDVASAL 774
+ ++ + +D F+ L H N + ++ DVA+AL
Sbjct: 65 YQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAAL 124
Query: 775 EYLHFSHSTPVIHCDLKPKNV---------------FDFGIGRLLTGDRSMIQTETLVT- 818
++LH + + H DLKP+N+ FD G G L + I T L T
Sbjct: 125 DFLH---TKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTP 181
Query: 819 ---IGYMAPGLL 827
YMAP ++
Sbjct: 182 CGSAEYMAPEVV 193
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 37.4 bits (85), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 70/165 (42%), Gaps = 22/165 (13%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCS 741
+G G+FG VYK + + + A KV L+ + E +++ + H N VK + +
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 742 NE-------DFKALDCLHSTNCSLNI-FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPK 793
E +F A + + L + I + L+ L++ H +IH DLK
Sbjct: 105 YENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 164
Query: 794 NVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
N+ DFG+ T R + + + + T +MAP ++
Sbjct: 165 NILFTLDGDIKLADFGVSAKNT--RXIQRRDXFIGTPYWMAPEVV 207
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 37.4 bits (85), Expect = 0.033, Method: Composition-based stats.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 11/142 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R +A+KV + A E E+ ++
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ L ++ L+ FD+ + L + H
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH 128
Query: 782 STPVIHCDLKPKNVFDFGIGRL 803
S VIH D+KP+N+ G L
Sbjct: 129 SKRVIHRDIKPENLLLGSAGEL 150
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-LNIMIDVA---SALEYLHFS 780
MK + H+N + ++ + + K+L+ + + D L+ +I + + YL +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 781 --------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYM 822
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 823 APGLL 827
AP ++
Sbjct: 193 APEVI 197
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 37.4 bits (85), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 38/184 (20%)
Query: 674 TEKFSKENLIGVGSFGSVY--KGRLHDGIEVAIKVFHQNCAMALKSFEA---ECEVMKNI 728
++++ + ++G GSFG V K ++ G E A+KV + E+ E +++K +
Sbjct: 49 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 107
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEY 776
H N +K ++ + L + +FD++ I+ V S + Y
Sbjct: 108 DHPNIMKLYEFFEDKGYFYL--VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 165
Query: 777 LHFSHSTPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETLVTIGYMA 823
+H ++H DLKP+N + DFG+ + M + + T Y+A
Sbjct: 166 MH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTAYYIA 220
Query: 824 PGLL 827
P +L
Sbjct: 221 PEVL 224
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 38/184 (20%)
Query: 674 TEKFSKENLIGVGSFGSVY--KGRLHDGIEVAIKVFHQNCAMALKSFEA---ECEVMKNI 728
++++ + ++G GSFG V K ++ G E A+KV + E+ E +++K +
Sbjct: 48 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 106
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEY 776
H N +K ++ + L + +FD++ I+ V S + Y
Sbjct: 107 DHPNIMKLYEFFEDKGYFYL--VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 164
Query: 777 LHFSHSTPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETLVTIGYMA 823
+H ++H DLKP+N + DFG+ + M + + T Y+A
Sbjct: 165 MH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTAYYIA 219
Query: 824 PGLL 827
P +L
Sbjct: 220 PEVL 223
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 675 EKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNH 733
+K+++ IG G+ G+VY + G EVAI+ + + E VM+ ++ N
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 734 VKRISS--CSNEDFKALDCLHSTN----CSLNIFDKLNIMIDVASALEYLHFSHSTPVIH 787
V + S +E + ++ L + + D+ I L+ L F HS VIH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 140
Query: 788 CDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
D+K N+ DFG +T ++S ++ + T +MAP ++
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVV 189
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 37.4 bits (85), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 75/170 (44%), Gaps = 18/170 (10%)
Query: 675 EKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNH 733
+K+++ IG G+ G+VY + G EVAI+ + + E VM+ ++ N
Sbjct: 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 79
Query: 734 VKRISS--CSNEDFKALDCLHSTN----CSLNIFDKLNIMIDVASALEYLHFSHSTPVIH 787
V + S +E + ++ L + + D+ I L+ L F HS VIH
Sbjct: 80 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 139
Query: 788 CDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
D+K N+ DFG +T ++S ++ + T +MAP ++
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RSXMVGTPYWMAPEVV 188
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%), Gaps = 38/184 (20%)
Query: 674 TEKFSKENLIGVGSFGSVY--KGRLHDGIEVAIKVFHQNCAMALKSFEA---ECEVMKNI 728
++++ + ++G GSFG V K ++ G E A+KV + E+ E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEY 776
H N +K ++ + L + +FD++ I+ V S + Y
Sbjct: 84 DHPNIMKLYEFFEDKGYFYL--VGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141
Query: 777 LHFSHSTPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETLVTIGYMA 823
+H ++H DLKP+N + DFG+ + M + + T Y+A
Sbjct: 142 MH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM--KDKIGTAYYIA 196
Query: 824 PGLL 827
P +L
Sbjct: 197 PEVL 200
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/182 (25%), Positives = 77/182 (42%), Gaps = 48/182 (26%)
Query: 668 QDLFRATEKFSKENLIGVGSFGSVYKGRL--HDG--IEVAIKVFHQN--CAMALKSFEAE 721
+D+ ++F+ ++G G FGSV + +L DG ++VA+K+ + + ++ F E
Sbjct: 16 EDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLRE 75
Query: 722 CEVMKNIRHRNHVKRISSCS--------------------NEDFKALDCLHSTNCSLNIF 761
MK H HV ++ S + D A L ++ N F
Sbjct: 76 AACMKEFDH-PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAF--LLASRIGENPF 132
Query: 762 D-----KLNIMIDVASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGR-LLT 805
+ + M+D+A +EYL S IH DL +N V DFG+ R + +
Sbjct: 133 NLPLQTLVRFMVDIACGMEYL---SSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYS 189
Query: 806 GD 807
GD
Sbjct: 190 GD 191
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+++D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 147 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.4 bits (85), Expect = 0.038, Method: Composition-based stats.
Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 18/171 (10%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRH 730
E F +G G FG+VY R +A+KV + A E E+ ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 731 RNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
N ++ + ++ L ++ L+ FD+ + L + HS
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 784 PVIHCDLKPKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
VIH D+KP+N+ G L D S +T T+ Y+ P ++
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPEMI 182
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-LNIMIDVA---SALEYLHFS 780
MK + H+N + ++ + + K+L+ + + D L+ +I + + YL +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 781 --------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYM 822
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 135 MLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 823 APGLL 827
AP ++
Sbjct: 193 APEVI 197
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 71/168 (42%), Gaps = 27/168 (16%)
Query: 683 IGVGSFGSVYKGRLH--DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRN--HVKRI 737
IG G F V K H G VAIK+ +N L + E E +KN+RH++ + +
Sbjct: 18 IGTGGFAKV-KLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHV 76
Query: 738 SSCSNEDFKALDCLHSTNCSLNIF--DKLN------IMIDVASALEYLHFSHSTPVIHCD 789
+N+ F L+ I D+L+ + + SA+ Y+H S H D
Sbjct: 77 LETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRD 133
Query: 790 LKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
LKP+N+ DFG+ G++ ++ Y AP L+
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELI 181
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 37.0 bits (84), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 136 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 190
Query: 824 PGLL 827
P L+
Sbjct: 191 PELI 194
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+++D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 147 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 68/177 (38%), Gaps = 38/177 (21%)
Query: 666 SYQDLFRATEKFSKE---------NLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
+++D + +F+KE ++G G FG V GRL I VAIK
Sbjct: 27 TFEDPTQTVHEFAKELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 86
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 87 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 146
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 147 IQLVGMLRGIASGMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 200
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFS---- 780
MK + H+N + ++ + + K L+ + + D N+ + L++ S
Sbjct: 77 MKXVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLLY 133
Query: 781 ---------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 78/183 (42%), Gaps = 30/183 (16%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH---QNCAMALKSFEAECEVM 725
++ E++ + +G G++GSV G VA+K Q+ A +++ E ++
Sbjct: 17 IWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR-ELRLL 75
Query: 726 KNIRHRNHVKRIS----SCSNEDFKALDCL-HSTNCSLNIFDKLNIMID------VASAL 774
K+++H N + + + S E+F + + H LN K + D + L
Sbjct: 76 KHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQIL 135
Query: 775 EYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAP 824
L + HS +IH DLKP N + DF + R D M T + T Y AP
Sbjct: 136 RGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFYLAR--HTDDEM--TGYVATRWYRAP 191
Query: 825 GLL 827
++
Sbjct: 192 EIM 194
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 37.0 bits (84), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 70/175 (40%), Gaps = 33/175 (18%)
Query: 680 ENLIGVGSFGSVYKGRLHDGIE----VAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHV 734
E +IG G FG V +GRL + VAIK + F +E +M H N +
Sbjct: 21 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 80
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFDKLN-----------IMIDVASALEYLHFSHST 783
+ +N + N +L+ F +LN ++ +AS + YL
Sbjct: 81 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEM 137
Query: 784 PVIHCDLKPKNVF----------DFGIGRLLTGDRS-MIQTETL---VTIGYMAP 824
+H DL +N+ DFG+ R L + S +T +L + I + AP
Sbjct: 138 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAP 192
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 37.0 bits (84), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 49/119 (41%)
Query: 421 PVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRS 480
P F L LQ LYL N L D L L L L GN+ S L SL
Sbjct: 121 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDR 180
Query: 481 PDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGD 539
L NR+ V P F +L ++ L +N+L + + LR + + L+ N + D
Sbjct: 181 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 239
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 32/177 (18%)
Query: 657 GKSKTLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
G ++T+ F+ + AT S + ++G G FG V GRL I VAIK
Sbjct: 18 GSTQTVHEFAKE--LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 74
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 75 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 134
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 135 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 188
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 77/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 93
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V ++ D +K L H +N + F
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLLKTQHLSNDHICYF---- 149
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 150 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 206 EYVATRWYRAPEIM 219
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 61/156 (39%), Gaps = 29/156 (18%)
Query: 680 ENLIGVGSFGSVYKGRLHDGIE----VAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHV 734
E +IG G FG V +GRL + VAIK + F +E +M H N +
Sbjct: 19 EEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNII 78
Query: 735 KRISSCSNEDFKALDCLHSTNCSLNIFDKLN-----------IMIDVASALEYLHFSHST 783
+ +N + N +L+ F +LN ++ +AS + YL
Sbjct: 79 RLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMRYL---AEM 135
Query: 784 PVIHCDLKPKNVF----------DFGIGRLLTGDRS 809
+H DL +N+ DFG+ R L + S
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSS 171
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-LNIMIDVA---SALEYLHFS 780
MK + H+N + ++ + + K+L+ + + D L+ +I + + YL +
Sbjct: 77 MKVVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 781 --------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYM 822
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 823 APGLL 827
AP ++
Sbjct: 193 APEVI 197
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 73
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 129
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 130 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 186 EYVATRWYRAPEIM 199
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 77
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 133
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 134 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 190 EYVATRWYRAPEIM 203
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 670 LFRATEKFS-----KENLIGVGSFGSVYKGRLHD--GIEVAIKVFHQN--CAMALKSFEA 720
+ A+ KFS KE L G G+F SV + +H G+E A K+ + A + E
Sbjct: 20 MMNASTKFSDNYDVKEEL-GKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLER 77
Query: 721 ECEVMKNIRHRNHVKRISSCSNEDFKAL-------DCLHSTNCSLNIFDKLNIMIDVASA 773
E + + ++H N V+ S E F L L + + + + +
Sbjct: 78 EARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQI 137
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF 796
LE + + HS ++H +LKP+N+
Sbjct: 138 LESIAYCHSNGIVHRNLKPENLL 160
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 49/119 (41%)
Query: 421 PVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRS 480
P F L LQ LYL N L D L L L L GN+ S L SL
Sbjct: 122 PGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDR 181
Query: 481 PDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGD 539
L NR+ V P F +L ++ L +N+L + + LR + + L+ N + D
Sbjct: 182 LLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 24/169 (14%)
Query: 681 NLIG-VGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRIS 738
+IG +G FG VYK + + + A KV L+ + E +++ + H N VK +
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLD 74
Query: 739 SCSNE-------DFKALDCLHSTNCSLNI-FDKLNIMIDVASALEYLHFSHSTPVIHCDL 790
+ E +F A + + L + I + L+ L++ H +IH DL
Sbjct: 75 AFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 134
Query: 791 KPKNVF----------DFGIGRLLTGDRSMIQTET--LVTIGYMAPGLL 827
K N+ DFG+ T R+ IQ + T +MAP ++
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAKNT--RTXIQRRDSFIGTPYWMAPEVV 181
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ ++ L+ FD+ + L + H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 41/205 (20%)
Query: 656 GGKSKTLRRFSYQDL----FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH 708
G KSK +F ++ F +++ IG G+ G V +D + VAIK
Sbjct: 2 GSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLS 59
Query: 709 ---QNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-- 763
QN A +++ E +MK + H+N + ++ + + K L+ + + D
Sbjct: 60 RPFQNQTHAKRAYR-ELVLMKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANL 116
Query: 764 ---LNIMIDVASALEYLHFS--------HSTPVIHCDLKPKN----------VFDFGIGR 802
+ + +D + YL + HS +IH DLKP N + DFG+ R
Sbjct: 117 CQVIQMELD-HERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
Query: 803 LLTGDRSMIQTETLVTIGYMAPGLL 827
T S + T +VT Y AP ++
Sbjct: 176 --TAGTSFMMTPYVVTRYYRAPEVI 198
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 73
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 129
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 130 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 186 EYVATRWYRAPEIM 199
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFS---- 780
MK + H+N + ++ + + K L+ + + D N+ + L++ S
Sbjct: 77 MKXVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLLY 133
Query: 781 ---------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|1W8A|A Chain A, Third Lrr Domain Of Drosophila Slit
Length = 192
Score = 36.6 bits (83), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDL 483
FGRL L L L N+L G P+ + + L L NK L L++ +L
Sbjct: 50 FGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109
Query: 484 GSNRLTSVLPSTFWNLKDILFFDLSSN 510
N+++ V+P +F +L + +L+SN
Sbjct: 110 YDNQISCVMPGSFEHLNSLTSLNLASN 136
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%)
Query: 414 NKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLG 473
N+LTG P F +Q L L NK+ L +L TL L N+ S +P
Sbjct: 64 NQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFE 123
Query: 474 NLTSLRSPDLGSN 486
+L SL S +L SN
Sbjct: 124 HLNSLTSLNLASN 136
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 295 KIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSG 354
++ L DN L S G+ LP++ +L L N+ +G P+ AS + L +G N
Sbjct: 33 ELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKE 92
Query: 355 IIP---------NTIGLTGNPLDGVLPTSIGNLSMSLENIYIS----NCNI 392
I T+ L N + V+P S +L+ SL ++ ++ NCN
Sbjct: 93 ISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLN-SLTSLNLASNPFNCNC 142
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 36.6 bits (83), Expect = 0.052, Method: Composition-based stats.
Identities = 35/144 (24%), Positives = 57/144 (39%), Gaps = 11/144 (7%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRH 730
E F +G G FG+VY R +A+KV + A E E+ ++RH
Sbjct: 12 EDFDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRH 71
Query: 731 RNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
N ++ + ++ L ++ L+ FD+ + L + HS
Sbjct: 72 PNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSK 131
Query: 784 PVIHCDLKPKNVFDFGIGRLLTGD 807
VIH D+KP+N+ G L D
Sbjct: 132 RVIHRDIKPENLLLGSNGELKIAD 155
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 36.6 bits (83), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 68/177 (38%), Gaps = 32/177 (18%)
Query: 657 GKSKTLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
G ++T+ F+ + AT S + ++G G FG V GRL I VAIK
Sbjct: 1 GSTQTVHEFAKE--LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 57
Query: 712 AMALKSFEAECEVMKNIRHRNHVK-----------RISSCSNEDFKALDCLHSTNCSLNI 760
+ F E +M H N ++ I + E+ L + +
Sbjct: 58 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQFTV 117
Query: 761 FDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 118 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 36.6 bits (83), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 11/146 (7%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFHQ---NCAMALKSFEAECEVMKNI 728
A E F +G G FG+VY R + A+KV + A E E+ ++
Sbjct: 11 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 70
Query: 729 RHRNHVKRISSCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
RH N ++ + ++ ++ L+ FD+ + L + H
Sbjct: 71 RHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCH 130
Query: 782 STPVIHCDLKPKNVFDFGIGRLLTGD 807
S VIH D+KP+N+ G L D
Sbjct: 131 SKRVIHRDIKPENLLLGSAGELKIAD 156
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 36.6 bits (83), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 675 EKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRH 730
E F NL+G GSF VY+ +H G+EVAIK+ + A ++ + E ++ ++H
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 36.6 bits (83), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 18/130 (13%)
Query: 713 MALKSFEAECEVMKNIR-HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMID-- 769
L S+ E + ++ H + + R+ D + N LN + K ID
Sbjct: 52 QTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPW 111
Query: 770 -----VASALEYLHFSHSTPVIHCDLKPKN---------VFDFGIGRLLTGDRSMIQTET 815
+ LE +H H ++H DLKP N + DFGI + D + + ++
Sbjct: 112 ERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDS 171
Query: 816 LV-TIGYMAP 824
V T+ YM P
Sbjct: 172 QVGTVNYMPP 181
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 78
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 134
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 135 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 191 EYVATRWYRAPEIM 204
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 24 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 79
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 80 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 135
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 136 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 192 EYVATRWYRAPEIM 205
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 15 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 70
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 71 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 126
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 127 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 183 EYVATRWYRAPEIM 196
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 36.6 bits (83), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 77
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 133
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 134 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 190 EYVATRWYRAPEIM 203
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 36.6 bits (83), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 45/184 (24%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
+G G+FG V+ H D + VA+K + A + F+ E E++ ++H++ V+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDK-------------------------LNIMIDVA 771
C+ + + + LN F + L + VA
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 772 SALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGR-LLTGDRSMIQTETLVTIG 820
+ + YL H +H DL +N + DFG+ R + + D + T++ I
Sbjct: 169 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 225
Query: 821 YMAP 824
+M P
Sbjct: 226 WMPP 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 71
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 127
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 128 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 184 EYVATRWYRAPEIM 197
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 16 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 71
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 72 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 127
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 128 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 184 EYVATRWYRAPEIM 197
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 70/177 (39%), Gaps = 32/177 (18%)
Query: 657 GKSKTLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-C 711
G ++T+ F+ + AT S + ++G G FG V GRL I VAIK
Sbjct: 1 GSTQTVHEFAKE--LDAT-NISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 57
Query: 712 AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-------- 763
+ F E +M H N ++ + + + N SL+ F +
Sbjct: 58 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQFTV 117
Query: 764 ---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
+ ++ +AS ++YL +H DL +N+ DFG+ R+L D
Sbjct: 118 IQLVGMLRGIASGMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 171
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 714 ALKSFEAECEVMKNIR-HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMID--- 769
L S+ E + ++ H + + R+ D + N LN + K ID
Sbjct: 49 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE 108
Query: 770 ----VASALEYLHFSHSTPVIHCDLKPKN---------VFDFGIGRLLTGDRSMIQTETL 816
+ LE +H H ++H DLKP N + DFGI + D + + ++
Sbjct: 109 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQ 168
Query: 817 V-TIGYMAP 824
V T+ YM P
Sbjct: 169 VGTVNYMPP 177
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-LNIMIDVA---SALEYLHFS 780
MK + H+N + ++ + + K+L+ + + D L+ +I + + YL +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 781 --------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYM 822
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 823 APGLL 827
AP ++
Sbjct: 193 APEVI 197
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.6 bits (83), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 75
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 76 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 131
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 132 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 188 EYVATRWYRAPEIM 201
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 26 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 81
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 82 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 137
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 138 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 194 EYVATRWYRAPEIM 207
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 73
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 129
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 130 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 186 EYVATRWYRAPEIM 199
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ + H+N V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 36.6 bits (83), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 38 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 93
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 94 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 149
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 150 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 206 EYVATRWYRAPEIM 219
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 75
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 76 ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 131
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 132 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 188 EYVATRWYRAPEIM 201
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 18 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 73
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 74 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 129
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 130 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 186 EYVATRWYRAPEIM 199
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 774 LEYLHFSHSTPVIHCDLKPKN---------VFDFGIGRLLTGD-RSMIQTETLVTIGYMA 823
LE +H H ++H DLKP N + DFGI + D S+++ + T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 824 P 824
P
Sbjct: 225 P 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 52/129 (40%), Gaps = 18/129 (13%)
Query: 714 ALKSFEAECEVMKNIR-HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMID--- 769
L S+ E + ++ H + + R+ D + N LN + K ID
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE 128
Query: 770 ----VASALEYLHFSHSTPVIHCDLKPKN---------VFDFGIGRLLTGDRSMIQTETL 816
+ LE +H H ++H DLKP N + DFGI + D + + ++
Sbjct: 129 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQ 188
Query: 817 V-TIGYMAP 824
V T+ YM P
Sbjct: 189 VGTVNYMPP 197
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 80
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 139
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 140 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 194
Query: 824 PGLL 827
P L+
Sbjct: 195 PELI 198
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHD--GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRN 732
+K+ +++IG G SV + +H G E A+K+ + A L + E EV + R
Sbjct: 94 QKYDPKDVIGRG-VSSVVRRCVHRATGHEFAVKIM-EVTAERLSPEQLE-EVREATRRET 150
Query: 733 HVKRISSCSNEDFKALDCLHSTNCSLNIFD--KLNIMID----------------VASAL 774
H+ R + +D S++ +FD + + D + S L
Sbjct: 151 HILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210
Query: 775 EYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
E + F H+ ++H DLKP+N+ DFG L + E T GY+AP
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKL--RELCGTPGYLAP 268
Query: 825 GLL 827
+L
Sbjct: 269 EIL 271
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 36.2 bits (82), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 77 MKXVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 133
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 774 LEYLHFSHSTPVIHCDLKPKN---------VFDFGIGRLLTGDRSMIQTETLV-TIGYMA 823
LE +H H ++H DLKP N + DFGI + D + + ++ V T+ YM
Sbjct: 118 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 177
Query: 824 P 824
P
Sbjct: 178 P 178
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 77
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 136
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 137 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 191
Query: 824 PGLL 827
P L+
Sbjct: 192 PELI 195
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 35/185 (18%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-LNIMIDVA---SALEYLHFS 780
MK + H+N + ++ + + K+L+ + + D L+ +I + + YL +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQ 134
Query: 781 --------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYM 822
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 135 MLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYYR 192
Query: 823 APGLL 827
AP ++
Sbjct: 193 APEVI 197
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 169
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 170 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 224
Query: 824 PGLL 827
P L+
Sbjct: 225 PELI 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 88
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 147
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 148 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 202
Query: 824 PGLL 827
P L+
Sbjct: 203 PELI 206
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 10/61 (16%)
Query: 774 LEYLHFSHSTPVIHCDLKPKN---------VFDFGIGRLLTGDRSMIQTETLV-TIGYMA 823
LE +H H ++H DLKP N + DFGI + D + + ++ V T+ YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMP 224
Query: 824 P 824
P
Sbjct: 225 P 225
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 36.2 bits (82), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 51/129 (39%), Gaps = 18/129 (13%)
Query: 714 ALKSFEAECEVMKNIR-HRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMID--- 769
L S+ E + ++ H + + R+ D + N LN + K ID
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKSIDPWE 128
Query: 770 ----VASALEYLHFSHSTPVIHCDLKPKN---------VFDFGIGRLLTGDRSMIQTETL 816
+ LE +H H ++H DLKP N + DFGI + D + ++
Sbjct: 129 RKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDXXXVVKDSQ 188
Query: 817 V-TIGYMAP 824
V T+ YM P
Sbjct: 189 VGTVNYMPP 197
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 136 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 190
Query: 824 PGLL 827
P L+
Sbjct: 191 PELI 194
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 36.2 bits (82), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 136 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 190
Query: 824 PGLL 827
P L+
Sbjct: 191 PELI 194
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 95
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 154
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 155 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 209
Query: 824 PGLL 827
P L+
Sbjct: 210 PELI 213
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 36.2 bits (82), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 88
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 147
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 148 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 202
Query: 824 PGLL 827
P L+
Sbjct: 203 PELI 206
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 36.2 bits (82), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 13 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 69
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFS---- 780
MK + H+N + ++ + + K L+ + + D N+ + L++ S
Sbjct: 70 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLLY 126
Query: 781 ---------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 127 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 184
Query: 822 MAPGLL 827
AP ++
Sbjct: 185 RAPEVI 190
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 66/157 (42%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ + H+N V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K+L+ + + D + + +D + YL +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLY 133
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPEVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 36.2 bits (82), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 84
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 143
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 144 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 198
Query: 824 PGLL 827
P L+
Sbjct: 199 PELI 202
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 81
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 82 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 140
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 141 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRA 195
Query: 824 PGLL 827
P L+
Sbjct: 196 PELI 199
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 155
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 156 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 214
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 215 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRA 269
Query: 824 PGLL 827
P L+
Sbjct: 270 PELI 273
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q K+F+ E ++M+ + H N V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQG-----KAFKNRELQIMRKLDHCNIV 76
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 136 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSXICSRYYRA 190
Query: 824 PGLL 827
P L+
Sbjct: 191 PELI 194
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 198
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 199 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 232
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 36.2 bits (82), Expect = 0.084, Method: Composition-based stats.
Identities = 26/83 (31%), Positives = 33/83 (39%)
Query: 431 QGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTS 490
Q L+L N++ P HL L L NK + LT L DL N L S
Sbjct: 36 QRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNHLKS 95
Query: 491 VLPSTFWNLKDILFFDLSSNSLD 513
+ F NLK + L +N D
Sbjct: 96 IPRGAFDNLKSLTHIYLYNNPWD 118
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 114
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 115 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 173
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 174 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRA 228
Query: 824 PGLL 827
P L+
Sbjct: 229 PELI 232
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 20 VFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLR----EIK 75
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 76 ILLAFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 131
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 132 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 188 EYVATRWYRAPEIM 201
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 33/178 (18%)
Query: 683 IGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRIS--- 738
+G G G V+ +D VAIK ++K E ++++ + H N VK
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 739 ---SCSNEDFKALDCLHSTNCS--------LNIFDKLNIMIDVASALEY-----LHFSHS 782
S +D +L L+S N+ ++ ++ + A Y L + HS
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIHS 138
Query: 783 TPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQ--TETLVTIGYMAPGLL 827
V+H DLKP N+F DFG+ R++ S +E LVT Y +P LL
Sbjct: 139 ANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLL 196
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 71/184 (38%), Gaps = 45/184 (24%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
+G G+FG V+ H D + VA+K + A + F+ E E++ ++H++ V+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDK-------------------------LNIMIDVA 771
C+ + + + LN F + L + VA
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 145
Query: 772 SALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR-LLTGDRSMIQTETLVTIG 820
+ + YL H +H DL +N DFG+ R + + D + T++ I
Sbjct: 146 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 202
Query: 821 YMAP 824
+M P
Sbjct: 203 WMPP 206
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 35.8 bits (81), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 72/184 (39%), Gaps = 45/184 (24%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
+G G+FG V+ H D + VA+K + A + F+ E E++ ++H++ V+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDK-------------------------LNIMIDVA 771
C+ + + + LN F + L + VA
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 139
Query: 772 SALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGR-LLTGDRSMIQTETLVTIG 820
+ + YL H +H DL +N + DFG+ R + + D + T++ I
Sbjct: 140 AGMVYLAGLH---FVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIR 196
Query: 821 YMAP 824
+M P
Sbjct: 197 WMPP 200
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 104
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 105 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 163
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 164 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRA 218
Query: 824 PGLL 827
P L+
Sbjct: 219 PELI 222
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 35.8 bits (81), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQ 812
IM + SA+ ++H V+H DLKP+N + DFG RL D ++
Sbjct: 111 IMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLK 167
Query: 813 TETLVTIGYMAPGLL 827
T T+ Y AP LL
Sbjct: 168 TPCF-TLHYAAPELL 181
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 35.8 bits (81), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 76
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 135
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 136 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRA 190
Query: 824 PGLL 827
P L+
Sbjct: 191 PELI 194
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 35.8 bits (81), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 112
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 113 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 171
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 172 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRA 226
Query: 824 PGLL 827
P L+
Sbjct: 227 PELI 230
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 35.8 bits (81), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 77/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFS---- 780
MK + H+N + ++ + + K L+ + + D N+ + L++ S
Sbjct: 77 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDA-NLXQVIQMELDHERMSYLLY 133
Query: 781 ---------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 134 QMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 35.8 bits (81), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 89
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 148
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 149 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRA 203
Query: 824 PGLL 827
P L+
Sbjct: 204 PELI 207
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.8 bits (81), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 78/178 (43%), Gaps = 27/178 (15%)
Query: 675 EKFSKENLIGVGSFGSVYKG---RLHDGIEVA-IKVFHQNCAMALKSFEAECEVMKNIRH 730
+++ + +G G++G VYK ++ + + I++ H+ + + E ++K ++H
Sbjct: 34 DRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKELQH 92
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-LNIMIDVASALEY-----LHFSHSTP 784
RN ++ S + L ++ N DK ++ + V + Y ++F HS
Sbjct: 93 RNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRR 152
Query: 785 VIHCDLKPKNVF---------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
+H DLKP+N+ DFG+ R G T ++T+ Y P +L
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF-GIPIRQFTHEIITLWYRPPEIL 209
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 78/184 (42%), Gaps = 44/184 (23%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFE-AECEVMKNIRHRNHV 734
++ +IG GSFG VY+ +L D E VAIK Q+ K F+ E ++M+ + H N V
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQD-----KRFKNRELQIMRKLDHCNIV 110
Query: 735 KR----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASAL 774
+ SS +D L+ + H + I+ KL M + +L
Sbjct: 111 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSL 169
Query: 775 EYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
Y+ HS + H D+KP+N+ DFG + L R + + Y A
Sbjct: 170 AYI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRA 224
Query: 824 PGLL 827
P L+
Sbjct: 225 PELI 228
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 35.8 bits (81), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 41/89 (46%), Gaps = 29/89 (32%)
Query: 740 CSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--- 796
CS ED + CLH I I +A A+E+LH S ++H DLKP N+F
Sbjct: 156 CSLEDREHGVCLH-------------IFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTM 199
Query: 797 -------DFGIGRLLTGDRSMIQTETLVT 818
DFG+ + D + +T++T
Sbjct: 200 DDVVKVGDFGLVTAMDQDE---EEQTVLT 225
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 42/183 (22%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVK 735
++ +IG GSFG VY+ +L D E VAIK Q A + E ++M+ + H N V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVR 77
Query: 736 R----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASALE 775
SS +D L+ + H + I+ KL M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 776 YLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
Y+ HS + H D+KP+N+ DFG + L R + + Y AP
Sbjct: 137 YI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAP 191
Query: 825 GLL 827
L+
Sbjct: 192 ELI 194
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 30/157 (19%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 779 FSHSTPVIHCDLKPKNVF--DFGIGRLLT-GDRSMIQ 812
+H IH D+ +N G GR+ GD M Q
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ 192
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 72/177 (40%), Gaps = 24/177 (13%)
Query: 674 TEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRH 730
T+++ IG G+F V + +L G E A K+ + A + E E + + ++H
Sbjct: 3 TDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 731 RNHVKRISSCSNEDFKAL-------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
N V+ S S E F L L + + + + + LE + H
Sbjct: 63 SNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQM 122
Query: 784 PVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
V+H DLKP+N+ DFG+ + GD+ T GY++P +L
Sbjct: 123 GVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAW-FGFAGTPGYLSPEVL 178
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 76/183 (41%), Gaps = 42/183 (22%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVK 735
++ +IG GSFG VY+ +L D E VAIK Q A + E ++M+ + H N V+
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR----ELQIMRKLDHCNIVR 77
Query: 736 R----ISSCSNEDFKALDCL-------------HSTNCSLN---IFDKLNIMIDVASALE 775
SS +D L+ + H + I+ KL M + +L
Sbjct: 78 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKL-YMYQLFRSLA 136
Query: 776 YLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
Y+ HS + H D+KP+N+ DFG + L R + + Y AP
Sbjct: 137 YI---HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEPNVSYICSRYYRAP 191
Query: 825 GLL 827
L+
Sbjct: 192 ELI 194
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAI+ HQ C L+ E +
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLR----EIK 77
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 133
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D T
Sbjct: 134 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 190 EYVATRWYRAPEIM 203
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 164
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 165 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 198
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 175
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 176 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 209
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 76/171 (44%), Gaps = 20/171 (11%)
Query: 675 EKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNH 733
+K+++ IG G+ G+VY + G EVAI+ + + E VM+ ++ N
Sbjct: 21 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNI 80
Query: 734 VKRISS--CSNEDFKALDCLHSTN----CSLNIFDKLNIMIDVASALEYLHFSHSTPVIH 787
V + S +E + ++ L + + D+ I L+ L F HS VIH
Sbjct: 81 VNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIH 140
Query: 788 CDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
++K N+ DFG +T ++S + T+V T +MAP ++
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQS--KRSTMVGTPYWMAPEVV 189
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 158
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 159 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 192
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 174
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 175 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 208
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLHDGIE-VAIKVFH--QNCAMALKSFEAECEVMK 726
++ + F ++L+G G++G V E VAIK AL++ E +++K
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLR-EIKILK 64
Query: 727 NIRHRN-----HVKRISSCSN-EDFKALDCLHSTN----CSLNIFDKLNIMIDVASALEY 776
+ +H N +++R S N + + L T+ S + +I + L
Sbjct: 65 HFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRA 124
Query: 777 LHFSHSTPVIHCDLKPKN----------VFDFGIGRLL----------TGDRSMIQTETL 816
+ H + VIH DLKP N V DFG+ R++ TG +S + E +
Sbjct: 125 VKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGM-VEFV 183
Query: 817 VTIGYMAPGLL 827
T Y AP ++
Sbjct: 184 ATRWYRAPEVM 194
>pdb|3ZYJ|A Chain A, Netring1 In Complex With Ngl1
pdb|3ZYJ|C Chain C, Netring1 In Complex With Ngl1
Length = 440
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 79/167 (47%), Gaps = 16/167 (9%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPD-QLCHLARLNTLGLAGNKFSGSIPS-CLGNLTSLRSP 481
F L L L L N+L +IP+ +L++L L L N SIPS + SLR
Sbjct: 108 FNGLANLNTLELFDNRLT-TIPNGAFVYLSKLKELWLRNNPIE-SIPSYAFNRIPSLRRL 165
Query: 482 DLGS-NRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIG---INLSRNNFS 537
DLG RL+ + F L ++ + +L+ +L +I NL +I ++LS N+ S
Sbjct: 166 DLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-----EIPNLTPLIKLDELDLSGNHLS 220
Query: 538 GDIPSTIGDLKDLQNISLACNGLEGLIPESFG---YLTELNLSFNKL 581
P + L LQ + + + ++ + +F L E+NL+ N L
Sbjct: 221 AIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLAHNNL 267
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 27/149 (18%)
Query: 678 SKENLIGVGSFGSVYK-GRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKR 736
SK ++G G FG V+K G+++A K+ + + E VM + H N ++
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 737 ISSCSNEDFKAL-----------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPV 785
+ +++ L D + + +L D + M + + ++H + +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMY---I 208
Query: 786 IHCDLKPKNVF------------DFGIGR 802
+H DLKP+N+ DFG+ R
Sbjct: 209 LHLDLKPENILCVNRDAKQIKIIDFGLAR 237
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 682 LIGVGSFGSVYKGRLHDGIEV--AIKVFHQNCAMALKSFE---AECEVM-KNIRHRNHVK 735
+IG GSFG V R H EV A+KV + + K + +E V+ KN++H V
Sbjct: 45 VIGKGSFGKVLLAR-HKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 736 RISSCSNED--FKALDC---------LHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
S D + LD L C L + ++ASAL YLH S
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARF-YAAEIASALGYLH---SLN 159
Query: 785 VIHCDLKPKNVFDFGIGRLLTGDRSMIQ--------TETLV-TIGYMAPGLL 827
+++ DLKP+N+ G ++ D + + T T T Y+AP +L
Sbjct: 160 IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVL 211
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K+L+ + + D + + +D + YL +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLY 133
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 184
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 185 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 218
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 25 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 81
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K+L+ + + D + + +D + YL +
Sbjct: 82 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLY 138
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 139 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 196
Query: 822 MAPGLL 827
AP ++
Sbjct: 197 RAPEVI 202
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 149
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 150 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 183
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K+L+ + + D + + +D + YL +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLY 133
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 75/176 (42%), Gaps = 39/176 (22%)
Query: 682 LIGVGSFGSVYKGRLHDGI---EVAIKVFHQNCAM--ALKSFEAECEVMKNIRHRNHVKR 736
++G GSFG V K + D I E A+KV ++ A + E E++K + H N +K
Sbjct: 29 MLGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKL 86
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEYLHFSHSTP 784
ED + + +FD++ I+ V S + Y+H H+
Sbjct: 87 FEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH-KHN-- 141
Query: 785 VIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
++H DLKP+N+ DFG+ + M + + T Y+AP +L
Sbjct: 142 IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIAPEVL 195
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 21 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 77
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K+L+ + + D + + +D + YL +
Sbjct: 78 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLY 134
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 192
Query: 822 MAPGLL 827
AP ++
Sbjct: 193 RAPEVI 198
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 44/159 (27%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 736 RISSC-------------SNEDFKALDCLHSTN------CSLNIFDKLNIMIDVASALEY 776
I + D K+ L T SL + D L++ D+A +Y
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSF--LRETRPRPSQPSSLAMLDLLHVARDIACGCQY 170
Query: 777 LHFSHSTPVIHCDLKPKNVF-------------DFGIGR 802
L +H IH D+ +N DFG+ R
Sbjct: 171 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 13 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 69
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 70 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 126
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 184
Query: 822 MAPGLL 827
AP ++
Sbjct: 185 RAPEVI 190
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 65/157 (41%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 157
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 158 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 49/193 (25%)
Query: 676 KFSKENLIGVGSFGSVYKGRL------HDGIEVAIKVFHQNCAMALK-SFEAECEVMKNI 728
+F +E +G FG VYKG L VAIK L+ F E + +
Sbjct: 29 RFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL 86
Query: 729 RHRNHVKRI-------------SSCSNED---FKALDCLHS----------TNCSLNIFD 762
+H N V + S CS+ D F + HS +L D
Sbjct: 87 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 146
Query: 763 KLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR-LLTGDRSMI 811
++++ +A+ +EYL H V+H DL +NV D G+ R + D +
Sbjct: 147 FVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 203
Query: 812 QTETLVTIGYMAP 824
+L+ I +MAP
Sbjct: 204 LGNSLLPIRWMAP 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 19 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 75
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 76 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 132
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 133 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 190
Query: 822 MAPGLL 827
AP ++
Sbjct: 191 RAPEVI 196
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 14 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 70
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 71 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 127
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 185
Query: 822 MAPGLL 827
AP ++
Sbjct: 186 RAPEVI 191
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 77 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 133
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 14 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 70
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 71 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 127
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 185
Query: 822 MAPGLL 827
AP ++
Sbjct: 186 RAPEVI 191
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 21 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 77
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 78 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 134
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 192
Query: 822 MAPGLL 827
AP ++
Sbjct: 193 RAPEVI 198
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 14 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 70
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K+L+ + + D + + +D + YL +
Sbjct: 71 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLY 127
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 128 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 185
Query: 822 MAPGLL 827
AP ++
Sbjct: 186 RAPEVI 191
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 31/134 (23%), Positives = 59/134 (44%), Gaps = 12/134 (8%)
Query: 674 TEKFSKENLIGVGSFGSVYKGRLHD--GIEVAIKVFHQN--CAMALKSFEAECEVMKNIR 729
++ + + +G G+F SV + +H G+E A K+ + A + E E + + ++
Sbjct: 5 SDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 730 HRNHVKRISSCSNEDFKALDCLHSTNCSL-------NIFDKLNIMIDVASALEYLHFSHS 782
H N V+ S E F L T L + + + + LE + + HS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 783 TPVIHCDLKPKNVF 796
++H +LKP+N+
Sbjct: 124 NGIVHRNLKPENLL 137
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 77 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 133
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 70/150 (46%), Gaps = 29/150 (19%)
Query: 681 NLIGVGSFGSVYKGRLHD--GIEVAIKVFHQNCAMALK---SFEAECEVMKNIRHRNHVK 735
+ +GVG+FG V G+ H+ G +VA+K+ ++ +L E + +K RH + +K
Sbjct: 22 DTLGVGTFGKVKVGK-HELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIK 80
Query: 736 --RISSCSNEDFKALDCLHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPV 785
++ S ++ F ++ + N L+ + + + S ++Y H V
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY---CHRHMV 137
Query: 786 IHCDLKPKNVF----------DFGIGRLLT 805
+H DLKP+NV DFG+ +++
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMS 167
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 18/163 (11%)
Query: 683 IGVGSFGSVYKGR-LHDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRIS 738
+G G FG+VY R + +A+KV ++ E E+ ++RH N ++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 739 SCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLK 791
+ +F L+ FD+ + + LH+ H VIH D+K
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 142
Query: 792 PKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
P+N+ G L D S+ + T+ Y+ P ++
Sbjct: 143 PENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI 185
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 64/159 (40%), Gaps = 44/159 (27%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + C+ + F E ++ H+N V+
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 736 RISSC-------------SNEDFKALDCLHSTN------CSLNIFDKLNIMIDVASALEY 776
I + D K+ L T SL + D L++ D+A +Y
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSF--LRETRPRPSQPSSLAMLDLLHVARDIACGCQY 155
Query: 777 LHFSHSTPVIHCDLKPKNVF-------------DFGIGR 802
L +H IH D+ +N DFG+ R
Sbjct: 156 LEENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 191
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 18/163 (11%)
Query: 683 IGVGSFGSVYKGR-LHDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRIS 738
+G G FG+VY R + +A+KV ++ E E+ ++RH N ++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 739 SCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLK 791
+ +F L+ FD+ + + LH+ H VIH D+K
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 792 PKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
P+N+ G L D S+ + T+ Y+ P ++
Sbjct: 142 PENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI 184
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 49/193 (25%)
Query: 676 KFSKENLIGVGSFGSVYKGRL------HDGIEVAIKVFHQNCAMALK-SFEAECEVMKNI 728
+F +E +G FG VYKG L VAIK L+ F E + +
Sbjct: 12 RFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARL 69
Query: 729 RHRNHVKRI-------------SSCSNED---FKALDCLHS----------TNCSLNIFD 762
+H N V + S CS+ D F + HS +L D
Sbjct: 70 QHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPD 129
Query: 763 KLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR-LLTGDRSMI 811
++++ +A+ +EYL H V+H DL +NV D G+ R + D +
Sbjct: 130 FVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKL 186
Query: 812 QTETLVTIGYMAP 824
+L+ I +MAP
Sbjct: 187 LGNSLLPIRWMAP 199
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 31/173 (17%)
Query: 680 ENLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRN-- 732
E +IGVG FG V GRL I VAIK + F +E +M H N
Sbjct: 13 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 72
Query: 733 HVKR-ISSCS-----NEDFK--ALDC-LHSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
H++ ++ C E + +LD L + + + ++ + S ++YL
Sbjct: 73 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDM 129
Query: 784 PVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET--LVTIGYMAP 824
+H DL +N+ DFG+ R+L D T + I + AP
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 182
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 65/163 (39%), Gaps = 18/163 (11%)
Query: 683 IGVGSFGSVYKGR-LHDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRIS 738
+G G FG+VY R + +A+KV ++ E E+ ++RH N ++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 739 SCSNE-------DFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLK 791
+ +F L+ FD+ + + LH+ H VIH D+K
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIK 141
Query: 792 PKNVFDFGIGRLLTGD-------RSMIQTETLVTIGYMAPGLL 827
P+N+ G L D S+ + T+ Y+ P ++
Sbjct: 142 PENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMI 184
>pdb|2Z64|A Chain A, Crystal Structure Of Mouse Tlr4 And Mouse Md-2 Complex
Length = 599
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 107/265 (40%), Gaps = 30/265 (11%)
Query: 360 IGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQXXXXXXXXXXXXXEGNKLTGS 419
I L+ NPL + S N S L+ + +S C I + GN +
Sbjct: 32 IDLSFNPLKILKSYSFSNFS-ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSF 90
Query: 420 IPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKF-SGSIPSCLGNLTSL 478
P +F L L+ L KLA + L L L +A N S +P+ NLT+L
Sbjct: 91 SPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNL 150
Query: 479 RSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLS-LDIGNLRVVIGINLS----R 533
DL N + ++ + L++ +L SLD L+ +D + GI L R
Sbjct: 151 VHVDLSYNYIQTITVNDLQFLRENPQVNL---SLDMSLNPIDFIQDQAFQGIKLHELTLR 207
Query: 534 NNF-SGDIPST--------------IGDLKDLQNISL-ACNGLEGLIPESFGYLTELNLS 577
NF S +I T +G+ KD +N+ + + +EGL + + E L+
Sbjct: 208 GNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVT---IDEFRLT 264
Query: 578 F-NKLEGEIPRGGPFANFTAKSFMG 601
+ N +I + AN +A S G
Sbjct: 265 YTNDFSDDIVKFHCLANVSAMSLAG 289
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 69/173 (39%), Gaps = 31/173 (17%)
Query: 680 ENLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRN-- 732
E +IGVG FG V GRL I VAIK + F +E +M H N
Sbjct: 19 EKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNII 78
Query: 733 HVKR-ISSCS-----NEDFK--ALDC-LHSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
H++ ++ C E + +LD L + + + ++ + S ++YL
Sbjct: 79 HLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMKYL---SDM 135
Query: 784 PVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTET--LVTIGYMAP 824
+H DL +N+ DFG+ R+L D T + I + AP
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAP 188
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 764 LNIMIDVASALEYLHFSHS--TPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811
L +M + AL+ H V+H DLKP NVF DFG+ R+L D S
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 812 QTETLVTIGYMAP 824
+T + T YM+P
Sbjct: 174 KT-FVGTPYYMSP 185
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Query: 422 VTFGRLQKLQGLYLPFNKL----AGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTS 477
TF L KL L L +N+L AG D L L TLGLA N+ + +LT
Sbjct: 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDD----LTELGTLGLANNQLASLPLGVFDHLTQ 108
Query: 478 LRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFS 537
L LG N+L S+ F L + L++N L + L + ++LS N
Sbjct: 109 LDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168
Query: 538 GDIPSTIGDLKDLQNISL 555
L LQ I+L
Sbjct: 169 SVPHGAFDRLGKLQTITL 186
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 145 MHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAK 204
+ KL +L+ NQL + V +L+ + + L +++L+ LP+ + ++L L L+L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 205 NMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPH 261
N + +L+ L L +L LT L+ +SL N+L+ +PH
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH 172
Score = 29.3 bits (64), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 413 GNKLTGSIPV-TFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPS- 470
N S+P+ F L +L LYL N+L L +L L L N+ SIP+
Sbjct: 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAG 149
Query: 471 CLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLD 513
LT+L++ L +N+L SV F L + L N D
Sbjct: 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 75/178 (42%), Gaps = 33/178 (18%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEV-AIKVFH-QNCAMALKSFEAECEVMKNIRHRN 732
E F+K IG GSFG V+KG + +V AIK+ + ++ + E V+ +
Sbjct: 23 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSS 81
Query: 733 HVKRISSCSNEDFK------------ALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFS 780
+V + + K ALD L + FD+ I + L+ L +
Sbjct: 82 YVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYL 136
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
HS IH D+K NV DFG+ LT + I+ T V T +MAP ++
Sbjct: 137 HSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTD--TQIKRNTFVGTPFWMAPEVI 192
>pdb|3VQ1|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ1|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LIPID IVA COMPLEX
pdb|3VQ2|A Chain A, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
pdb|3VQ2|B Chain B, Crystal Structure Of Mouse Tlr4MD-2LPS COMPLEX
Length = 606
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 107/265 (40%), Gaps = 30/265 (11%)
Query: 360 IGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQXXXXXXXXXXXXXEGNKLTGS 419
I L+ NPL + S N S L+ + +S C I + GN +
Sbjct: 37 IDLSFNPLKILKSYSFSNFS-ELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSF 95
Query: 420 IPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKF-SGSIPSCLGNLTSL 478
P +F L L+ L KLA + L L L +A N S +P+ NLT+L
Sbjct: 96 SPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNL 155
Query: 479 RSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLS-LDIGNLRVVIGINLS----R 533
DL N + ++ + L++ +L SLD L+ +D + GI L R
Sbjct: 156 VHVDLSYNYIQTITVNDLQFLRENPQVNL---SLDMSLNPIDFIQDQAFQGIKLHELTLR 212
Query: 534 NNF-SGDIPST--------------IGDLKDLQNISL-ACNGLEGLIPESFGYLTELNLS 577
NF S +I T +G+ KD +N+ + + +EGL + + E L+
Sbjct: 213 GNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVT---IDEFRLT 269
Query: 578 F-NKLEGEIPRGGPFANFTAKSFMG 601
+ N +I + AN +A S G
Sbjct: 270 YTNDFSDDIVKFHCLANVSAMSLAG 294
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Query: 451 LARLNTLGLAGNKF-SGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSS 509
L LNTL +AGN F ++ + N T+L DL +L + F L + ++S
Sbjct: 447 LTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSH 506
Query: 510 NSL 512
N+L
Sbjct: 507 NNL 509
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 674 TEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFHQNCAM--ALKSFEAECEVMKNI 728
E+++ ++G GSFG V K + D I E A+KV ++ A + E E++K +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEY 776
H N +K ED + + +FD++ I+ V S + Y
Sbjct: 79 DHPNIMKLFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 777 LHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
+H H+ ++H DLKP+N+ DFG+ + M + + T Y+A
Sbjct: 137 MH-KHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIA 191
Query: 824 PGLL 827
P +L
Sbjct: 192 PEVL 195
>pdb|2V9S|A Chain A, Second Lrr Domain Of Human Slit2
pdb|2V9S|B Chain B, Second Lrr Domain Of Human Slit2
pdb|2V9S|C Chain C, Second Lrr Domain Of Human Slit2
pdb|2V9S|D Chain D, Second Lrr Domain Of Human Slit2
Length = 220
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 412 EGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSC 471
E N + P F +KL+ + L N+++ PD L LN+L L GNK + S
Sbjct: 40 EQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSL 99
Query: 472 LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINL 531
L SL+ L +N++ + F +L ++ L N L LR + ++L
Sbjct: 100 FEGLFSLQLLLLNANKINXLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHL 159
Query: 532 SRNNFSGD 539
++N F D
Sbjct: 160 AQNPFICD 167
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 79/184 (42%), Gaps = 39/184 (21%)
Query: 674 TEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFHQNCAM--ALKSFEAECEVMKNI 728
E+++ ++G GSFG V K + D I E A+KV ++ A + E E++K +
Sbjct: 21 AERYNIVCMLGKGSFGEVLKCK--DRITQQEYAVKVINKASAKNKDTSTILREVELLKKL 78
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEY 776
H N +K ED + + +FD++ I+ V S + Y
Sbjct: 79 DHPNIMKLFEIL--EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136
Query: 777 LHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
+H H+ ++H DLKP+N+ DFG+ + M + + T Y+A
Sbjct: 137 MH-KHN--IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKM--KDRIGTAYYIA 191
Query: 824 PGLL 827
P +L
Sbjct: 192 PEVL 195
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 681 NLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALK---SFEAECEVMKNIRHRNHVK- 735
+ +GVG+FG V G G +VA+K+ ++ +L + E + +K RH + +K
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 736 -RISSCSNEDFKALDCLHSTN-----CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
++ S + F ++ + C +++ L + + H V+H D
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRD 136
Query: 790 LKPKNVF----------DFGIGRLLT 805
LKP+NV DFG+ +++
Sbjct: 137 LKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 34.7 bits (78), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 23/168 (13%)
Query: 681 NLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALK---SFEAECEVMKNIRHRNHVK- 735
+ +GVG+FG V G G +VA+K+ ++ +L + E + +K RH + +K
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKL 76
Query: 736 -RISSCSNEDFKALDCLHSTN-----CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCD 789
++ S + F ++ + C +++ L + + H V+H D
Sbjct: 77 YQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRD 136
Query: 790 LKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
LKP+NV DFG+ +++ D ++T + + Y AP ++
Sbjct: 137 LKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRT-SCGSPNYAAPEVI 182
>pdb|2V9T|B Chain B, Complex Between The Second Lrr Domain Of Slit2 And The
First Ig Domain From Robo1
Length = 220
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 412 EGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSC 471
E N + P F +KL+ + L N+++ PD L LN+L L GNK + S
Sbjct: 40 EQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSL 99
Query: 472 LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINL 531
L SL+ L +N++ + F +L ++ L N L LR + ++L
Sbjct: 100 FEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHL 159
Query: 532 SRNNFSGD 539
++N F D
Sbjct: 160 AQNPFICD 167
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 57/138 (41%), Gaps = 8/138 (5%)
Query: 422 VTFGRLQKLQGLYLPFNKL----AGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTS 477
TF L KL L L +N+L AG D L L TLGLA N+ + +LT
Sbjct: 53 ATFRGLTKLTWLNLDYNQLQTLSAGVFDD----LTELGTLGLANNQLASLPLGVFDHLTQ 108
Query: 478 LRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFS 537
L LG N+L S+ F L + L++N L + L + ++LS N
Sbjct: 109 LDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ 168
Query: 538 GDIPSTIGDLKDLQNISL 555
L LQ I+L
Sbjct: 169 SVPHGAFDRLGKLQTITL 186
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 56/117 (47%), Gaps = 2/117 (1%)
Query: 145 MHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAK 204
+ KL +L+ NQL + V +L+ + + L +++L+ LP+ + ++L L L+L
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLA-SLPLGVFDHLTQLDKLYLGG 116
Query: 205 NMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPH 261
N + +L+ L L +L LT L+ +SL N+L+ +PH
Sbjct: 117 NQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH 172
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 413 GNKLTGSIPV-TFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPS- 470
N S+P+ F L +L LYL N+L L +L L L N+ SIP+
Sbjct: 91 ANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQ-SIPAG 149
Query: 471 CLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLD 513
LT+L++ L +N+L SV F L + L N D
Sbjct: 150 AFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFD 192
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 22 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 77
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 78 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 133
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D
Sbjct: 134 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 190 EXVATRWYRAPEIM 203
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 75/194 (38%), Gaps = 48/194 (24%)
Query: 670 LFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVF----HQN-CAMALKSFEAECE 723
+F +++ + IG G++G V + + + VAIK HQ C L+ E +
Sbjct: 23 VFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLR----EIK 78
Query: 724 VMKNIRHRN-----------------HVKRISSCSNED-FKALDCLHSTNCSLNIFDKLN 765
++ RH N V + D +K L H +N + F
Sbjct: 79 ILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQHLSNDHICYF---- 134
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQT 813
+ + L+Y+H S V+H DLKP N+ DFG+ R+ D
Sbjct: 135 -LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 814 ETLVTIGYMAPGLL 827
E + T Y AP ++
Sbjct: 191 EXVATRWYRAPEIM 204
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 34.7 bits (78), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 774 LEYLHFSHSTPVIHCDLKPKN---------VFDFGIGRLLTGD-RSMIQTETLVTIGYMA 823
LE +H H ++H DLKP N + DFGI + D S+++ + + YM
Sbjct: 165 LEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMP 224
Query: 824 P 824
P
Sbjct: 225 P 225
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 58 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 114
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 115 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 171
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 229
Query: 822 MAPGLL 827
AP ++
Sbjct: 230 RAPEVI 235
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 18/79 (22%)
Query: 762 DKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDR 808
D NIM + S + YLH H+ ++H D+KP+N+ DFG+ + D
Sbjct: 147 DAANIMKQILSGICYLH-KHN--IVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 809 SMIQTETLVTIGYMAPGLL 827
+ + L T Y+AP +L
Sbjct: 204 KL--RDRLGTAYYIAPEVL 220
>pdb|3A79|B Chain B, Crystal Structure Of Tlr2-Tlr6-Pam2csk4 Complex
Length = 562
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 92/194 (47%), Gaps = 43/194 (22%)
Query: 144 TMHKLKFLDFSDNQLSG--SLSSVTFNLSSV--LDIRLDSDKLSGELPVNICNYLHYLKV 199
T+ +L+ L N L ++ +T N+SS+ LD+ L+S L+ C + + V
Sbjct: 375 TLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNS--LNSHAYDRTCAWAESILV 432
Query: 200 LFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEI 259
L L+ NM G + L ++++L+L ++ +IPK++++L L+++++ +N+L+
Sbjct: 433 LNLSSNMLTGSVFRCLPP--KVKVLDLHNNRI-MSIPKDVTHLQALQELNVASNQLKS-- 487
Query: 260 PHEIGYLPXXXXXXXXXXXXXXXXPAAIFN-MSTVKKIYLLDNSLLGSFSLGIDLSLPNV 318
P +F+ +++++ I+L DN D + P +
Sbjct: 488 -----------------------VPDGVFDRLTSLQYIWLHDNPW--------DCTCPGI 516
Query: 319 ERLNLGLNRFSGTI 332
L+ +N+ SG +
Sbjct: 517 RYLSEWINKHSGVV 530
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 6/128 (4%)
Query: 451 LARLNTLGLAGNKFSGSIPSCL--GNLTSLRSPDLGSNRLTS-VLPSTFWNLKDILFFDL 507
L RL TL L N L N++SL + D+ N L S T + IL +L
Sbjct: 376 LKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESILVLNL 435
Query: 508 SSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPES 567
SSN L G + + V+ ++ NN IP + L+ LQ +++A N L+ +
Sbjct: 436 SSNMLTGSVFRCLPPKVKVLDLH---NNRIMSIPKDVTHLQALQELNVASNQLKSVPDGV 492
Query: 568 FGYLTELN 575
F LT L
Sbjct: 493 FDRLTSLQ 500
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 73/179 (40%), Gaps = 28/179 (15%)
Query: 674 TEKFSKENLIGVGSFGSVY--KGRLHDGIEVAIKVFHQNCAMALKSFEA---ECEVMKNI 728
++++ + ++G GSFG V K ++ G E A+KV + E+ E +++K +
Sbjct: 25 SDRYKGQRVLGKGSFGEVILCKDKIT-GQECAVKVISKRQVKQKTDKESLLREVQLLKQL 83
Query: 729 RHRNHVKRISSCSNEDFKAL-------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSH 781
H N K ++ + L L S F +++ + L + + H
Sbjct: 84 DHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXH 143
Query: 782 STPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
++H DLKP+N + DFG+ + + + T Y+AP +L
Sbjct: 144 KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX--KDKIGTAYYIAPEVL 200
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D + VAIK QN A +++ E +
Sbjct: 58 FTVLKRYQNLKPIGSGAQGIVCAA--YDAVLDRNVAIKKLSRPFQNQTHAKRAYR-ELVL 114
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K L+ + + D + + +D + YL +
Sbjct: 115 MKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIQMELD-HERMSYLLY 171
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + T +VT Y
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMTPYVVTRYY 229
Query: 822 MAPGLL 827
AP ++
Sbjct: 230 RAPEVI 235
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 34.3 bits (77), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 24/177 (13%)
Query: 674 TEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRH 730
T+++ +G G+F V + ++ G E A K+ + A + E E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 731 RNHVKRISSCSNEDFKAL-------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
N V+ S S E F L L + + + + + LE ++ H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 784 PVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
++H DLKP+N+ DFG+ + GD+ T GY++P +L
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW-FGFAGTPGYLSPEVL 178
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 20/129 (15%)
Query: 683 IGVGSFGSVYKGR-LHDGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISS 739
IG G+F V R + G EVAIK+ + +L+ E +MK + H N VK
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 740 CSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEYLHFSHSTPVIH 787
E K L + +FD L + + SA++Y H ++H
Sbjct: 80 IETE--KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY---CHQKRIVH 134
Query: 788 CDLKPKNVF 796
DLK +N+
Sbjct: 135 RDLKAENLL 143
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 14/66 (21%)
Query: 769 DVASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVT 818
D+ +EYLH+ +IH D+KP N + DFG+ G +++ + T+ T
Sbjct: 145 DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALL-SNTVGT 200
Query: 819 IGYMAP 824
+MAP
Sbjct: 201 PAFMAP 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 34.3 bits (77), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 764 LNIMIDVASALEYLHFSHS--TPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811
L +M + AL+ H V+H DLKP NVF DFG+ R+L D
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFA 173
Query: 812 QTETLVTIGYMAP 824
+ E + T YM+P
Sbjct: 174 K-EFVGTPYYMSP 185
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 18/83 (21%)
Query: 758 LNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKN-------------VFDFGIGRLL 804
N D I+ V S + YLH H+ ++H DLKP+N + DFG+ +
Sbjct: 133 FNEVDAAVIIKQVLSGVTYLH-KHN--IVHRDLKPENLLLESKEKDALIKIVDFGLSAVF 189
Query: 805 TGDRSMIQTETLVTIGYMAPGLL 827
+ M E L T Y+AP +L
Sbjct: 190 ENQKKM--KERLGTAYYIAPEVL 210
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 81/186 (43%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSV---YKGRLHDGIEVAIKVFH---QNCAMALKSFEAECEV 724
F +++ + IG G+ G V + L GI VA+K QN A +++ E +
Sbjct: 18 FTVLKRYQQLKPIGSGAQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYR-ELVL 74
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
+K + H+N + ++ + + K L+ + + D +++ +D + YL +
Sbjct: 75 LKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIHMELD-HERMSYLLY 131
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T + + T +VT Y
Sbjct: 132 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TASTNFMMTPYVVTRYY 189
Query: 822 MAPGLL 827
AP ++
Sbjct: 190 RAPEVI 195
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 20/95 (21%)
Query: 745 FKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------- 796
+K L H +N + F + + L+Y+H S V+H DLKP N+
Sbjct: 117 YKLLKTQHLSNDHICYF-----LYQILRGLKYIH---SANVLHRDLKPSNLLLNTTXDLK 168
Query: 797 --DFGIGRLLTGDRSM--IQTETLVTIGYMAPGLL 827
DFG+ R+ D TE + T Y AP ++
Sbjct: 169 ICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIM 203
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 34.3 bits (77), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 73/177 (41%), Gaps = 24/177 (13%)
Query: 674 TEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRH 730
T+++ +G G+F V + ++ G E A K+ + A + E E + + ++H
Sbjct: 3 TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKH 62
Query: 731 RNHVKRISSCSNEDFKAL-------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
N V+ S S E F L L + + + + + LE ++ H
Sbjct: 63 PNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLN 122
Query: 784 PVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
++H DLKP+N+ DFG+ + GD+ T GY++P +L
Sbjct: 123 GIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAW-FGFAGTPGYLSPEVL 178
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 34.3 bits (77), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 27/178 (15%)
Query: 674 TEKFSKENLIGVGSFGSVYKGRLHD--GIEVAIKVFHQN--CAMALKSFEAECEVMKNIR 729
++ + + +G G+F SV + +H G+E A K+ + A + E E + + ++
Sbjct: 5 SDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 63
Query: 730 HRNHVKRISSCSNEDFKAL-------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHS 782
H N V+ S E F L L + + + + + LE + + HS
Sbjct: 64 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 123
Query: 783 TPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
++H +LKP+N+ DFG+ + + S T GY++P +L
Sbjct: 124 NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 179
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 34.3 bits (77), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 73/167 (43%), Gaps = 42/167 (25%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGIE---VAIK----VFHQ--NCAMALKSFEAE 721
++ +++ +LIG GS+G V + +D +E VAIK VF +C L+ E
Sbjct: 49 WQIPDRYEIRHLIGTGSYGHVCEA--YDKLEKRVVAIKKILRVFEDLIDCKRILR----E 102
Query: 722 CEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFD--------------KLNIM 767
++ + H + VK + +D + D L+ L I D +L+I
Sbjct: 103 IAILNRLNHDHVVKVLDIVIPKDVEKFDELYVV---LEIADSDFKKLFRTPVYLTELHIK 159
Query: 768 IDVASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLL 804
+ + L + + HS ++H DLKP N V DFG+ R +
Sbjct: 160 TLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTV 206
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 33.9 bits (76), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 35/76 (46%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 174
Query: 812 QTETLVTIGYMAPGLL 827
TE T Y+AP +L
Sbjct: 175 -TEPCYTPYYVAPEVL 189
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 33.9 bits (76), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%), Gaps = 27/178 (15%)
Query: 674 TEKFSKENLIGVGSFGSVYKGRLHD--GIEVAIKVFHQN--CAMALKSFEAECEVMKNIR 729
++ + + +G G+F SV + +H G+E A K+ + A + E E + + ++
Sbjct: 4 SDNYDVKEELGKGAF-SVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 730 HRNHVKRISSCSNEDFKAL-------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHS 782
H N V+ S E F L L + + + + + LE + + HS
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHS 122
Query: 783 TPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
++H +LKP+N+ DFG+ + + S T GY++P +L
Sbjct: 123 NGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGYLSPEVL 178
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 71/195 (36%), Gaps = 51/195 (26%)
Query: 677 FSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVK 735
F + LIG G FG V+K + DG I+ N A E E + + + H N V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKA----EREVKALAKLDHVNIVH 69
Query: 736 RISSCSNEDFK---ALDCLHS---------------TNC---SLNIFDKLNI-------- 766
D+ + D L S T C + DK +
Sbjct: 70 YNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRR 129
Query: 767 --MIDVASALEYLH-------FSHSTPVIHCDLKPKNVFDFGIGRLLTGDRSMI------ 811
+D ALE + HS +IH DLKP N+F ++ GD ++
Sbjct: 130 GEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKND 189
Query: 812 --QTETLVTIGYMAP 824
+T + T+ YM+P
Sbjct: 190 GKRTRSKGTLRYMSP 204
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 20/129 (15%)
Query: 683 IGVGSFGSVYKGR-LHDGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISS 739
IG G+F V R + G EVAIK+ + +L+ E +MK + H N VK
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 740 CSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEYLHFSHSTPVIH 787
E K L + +FD L + + SA++Y H ++H
Sbjct: 83 IETE--KTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQY---CHQKRIVH 137
Query: 788 CDLKPKNVF 796
DLK +N+
Sbjct: 138 RDLKAENLL 146
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 79/205 (38%), Gaps = 38/205 (18%)
Query: 653 SIRGGKSKTLRRFSY-----QDLFRATEKFSKENLIGVGSFGSVYK------GRLHDGIE 701
S RG S+TL+ Y + F+ + F + + +G GS+G V+K GRL+ ++
Sbjct: 32 SFRGEASETLQSPGYDPSRPESFFQ--QSFQRLSRLGHGSYGEVFKVRSKEDGRLY-AVK 88
Query: 702 VAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED----FKALDC------- 750
++ F A K AE + + R+ E + C
Sbjct: 89 RSMSPFRGPKDRARKL--AEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELCGPSLQQH 146
Query: 751 LHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVFDFGIGRLLTGDRSM 810
+ SL + D AL +LH S ++H D+KP N+F GR GD +
Sbjct: 147 CEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
Query: 811 IQTETLVTIG--------YMAPGLL 827
+ G YMAP LL
Sbjct: 204 LVELGTAGAGEVQEGDPRYMAPELL 228
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 22/92 (23%)
Query: 740 CSNEDFKALDCLHSTNCSLNIFDK---LNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF 796
C E+ K D ++ C++ ++ L+I + +A A+E+LH S ++H DLKP N+F
Sbjct: 97 CRKENLK--DWMNG-RCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIF 150
Query: 797 ----------DFGIGRLLTGDRSMIQTETLVT 818
DFG+ + D + +T++T
Sbjct: 151 FTMDDVVKVGDFGLVTAMDQDE---EEQTVLT 179
>pdb|1H6U|A Chain A, Internalin H: Crystal Structure Of Fused N-Terminal
Domains
Length = 308
Score = 33.5 bits (75), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 11/106 (10%)
Query: 427 LQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSN 486
L L GL L N++ P L +L ++ L L+GN S + L S+++ DL S
Sbjct: 62 LNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTST 117
Query: 487 RLTSVLPSTFWNLKDILFFDLSSNSLDGPLS-------LDIGNLRV 525
++T V P + +L+ DL+ + PL+ L IGN +V
Sbjct: 118 QITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQV 163
>pdb|4FHO|A Chain A, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
pdb|4FHO|B Chain B, Crystal Structure Of An Internalin C2 (Inlc2) From
Listeria Monocytogenes Str. 4b F2365 At 1.90 A
Resolution
Length = 231
Score = 33.5 bits (75), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%), Gaps = 13/107 (12%)
Query: 427 LQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSN 486
L L GL L N++ P L +L ++ L L+GN S + L S+++ DL S
Sbjct: 68 LNNLIGLELKDNQITDLTP--LKNLTKITELELSGNPLKNV--SAIAGLQSIKTLDLTST 123
Query: 487 RLTSVLP-STFWNLKDILFFDLSSNSLDGPLS-------LDIGNLRV 525
++T V P + NL+ +L+ DL+ + PL+ L IGN +V
Sbjct: 124 QITDVTPLAGLSNLQ-VLYLDLNQITNISPLAGLTNLQYLSIGNNQV 169
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 24/154 (15%)
Query: 284 PAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNA-SKL 342
PA I + + +YL DN + G+ SL N++ L LG N+ G +P + ++ ++L
Sbjct: 35 PAGIPTNAQI--LYLHDNQIT-KLEPGVFDSLINLKELYLGSNQL-GALPVGVFDSLTQL 90
Query: 343 VYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQXXXX 402
LD+GTN + VLP+++ + + L+ +++ CN +P+
Sbjct: 91 TVLDLGTNQLT----------------VLPSAVFDRLVHLKELFMC-CNKLTELPRGIER 133
Query: 403 XXXXXXXXXEGNKLTGSIPV-TFGRLQKLQGLYL 435
+ N+L SIP F RL L YL
Sbjct: 134 LTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYL 166
Score = 29.3 bits (64), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 64/162 (39%), Gaps = 31/162 (19%)
Query: 457 LGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPL 516
L L N+ + P +L +L+ LGSN+L ++ F +L + DL +N L
Sbjct: 45 LYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTV-- 102
Query: 517 SLDIGNLRVVIGINLSRNNFSGDIPSTIGD-LKDLQNISLACNGLEGLIP--ESFGYLTE 573
+PS + D L L+ + + CN L L E +LT
Sbjct: 103 -----------------------LPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTH 139
Query: 574 LNLSFNKLEGEIPRGG--PFANFTAKSFMGNEKLCGLPNLQF 613
L L N+L+ IP G ++ T GN C ++ +
Sbjct: 140 LALDQNQLKS-IPHGAFDRLSSLTHAYLFGNPWDCECRDIMY 180
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 33.5 bits (75), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 66/184 (35%), Gaps = 42/184 (22%)
Query: 677 FSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVK 735
F + LIG G FG V+K + DG IK N A E E + + + H N V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKA----EREVKALAKLDHVNIVH 68
Query: 736 R-----------ISSCSNEDFKALDCL-------HSTNCSLNIFDKLNIMIDVASALEYL 777
+S N CL I + +D ALE
Sbjct: 69 YNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELF 128
Query: 778 H-------FSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIG 820
+ HS +I+ DLKP N+F DFG+ L D +++ T+
Sbjct: 129 EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG--TLR 186
Query: 821 YMAP 824
YM+P
Sbjct: 187 YMSP 190
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 33.5 bits (75), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 22 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 78
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K+L+ + + D + + +D + YL +
Sbjct: 79 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLY 135
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + +VT Y
Sbjct: 136 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMVPFVVTRYY 193
Query: 822 MAPGLL 827
AP ++
Sbjct: 194 RAPEVI 199
>pdb|3CIG|A Chain A, Crystal Structure Of Mouse Tlr3 Ectodomain
pdb|3CIY|A Chain A, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
pdb|3CIY|B Chain B, Mouse Toll-Like Receptor 3 Ectodomain Complexed With
Double-Stranded Rna
Length = 697
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 414 NKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCH-LARLNTLGLAGNKFSGSIPSCL 472
N+L P F R +L L FN ++ P +LC L L L L N+ S
Sbjct: 35 NQLRRLPPTNFTRYSQLAILDAGFNSISKLEP-ELCQILPLLKVLNLQHNELSQISDQTF 93
Query: 473 GNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSL 512
T+L DL SN + + + F N K+++ DLS N L
Sbjct: 94 VFCTNLTELDLMSNSIHKIKSNPFKNQKNLIKLDLSHNGL 133
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 33.5 bits (75), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K+L+ + + D + + +D + YL +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLY 133
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 78/186 (41%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGI---EVAIKVFH---QNCAMALKSFEAECEV 724
F +++ IG G+ G V +D I VAIK QN A +++ E +
Sbjct: 20 FTVLKRYQNLKPIGSGAQGIVCAA--YDAILERNVAIKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
MK + H+N + ++ + + K+L+ + + D + + +D + YL +
Sbjct: 77 MKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDANLCQVIQMELD-HERMSYLLY 133
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T S + +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TAGTSFMMEPEVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 33.1 bits (74), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 44/164 (26%)
Query: 680 ENLIGVGSFGSVYKGRL-HDG--IEVAIKVFHQNCAM-ALKSFEAECEVMKNIRHR-NHV 734
+++IG G+FG V K R+ DG ++ AIK + + + F E EV+ + H N +
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 735 KRISSCSNEDF--------------------------KALDCLHSTNCSLNIFDKLNIMI 768
+ +C + + A +ST +L+ L+
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 769 DVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802
DVA ++YL IH DL +N+ DFG+ R
Sbjct: 140 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 180
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 65/164 (39%), Gaps = 44/164 (26%)
Query: 680 ENLIGVGSFGSVYKGRL-HDG--IEVAIKVFHQNCAM-ALKSFEAECEVMKNIRHR-NHV 734
+++IG G+FG V K R+ DG ++ AIK + + + F E EV+ + H N +
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 735 KRISSCSNEDF--------------------------KALDCLHSTNCSLNIFDKLNIMI 768
+ +C + + A +ST +L+ L+
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 769 DVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802
DVA ++YL IH DL +N+ DFG+ R
Sbjct: 150 DVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSR 190
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 33.1 bits (74), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 34/73 (46%), Gaps = 13/73 (17%)
Query: 764 LNIMIDVASALEYLHFSHS--TPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811
L +M + AL+ H V+H DLKP NVF DFG+ R+L D S
Sbjct: 114 LRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFA 173
Query: 812 QTETLVTIGYMAP 824
+ + T YM+P
Sbjct: 174 KA-FVGTPYYMSP 185
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 33.1 bits (74), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 20/149 (13%)
Query: 661 TLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC------AM 713
T R+ +D + E+ +G G F V K R G E A K + +
Sbjct: 4 TFRQEDVEDHYEMGEE------LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGV 57
Query: 714 ALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIF--DKLNIMIDVA 771
+ + E E +++ IRH N + N+ L + L F +K ++ D A
Sbjct: 58 SREEIEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEA 117
Query: 772 SA-----LEYLHFSHSTPVIHCDLKPKNV 795
+ L+ +H+ HS + H DLKP+N+
Sbjct: 118 TQFLKQILDGVHYLHSKRIAHFDLKPENI 146
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 32.7 bits (73), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 61/154 (39%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 71
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I +++ + D+ LE + H
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 165
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 67/165 (40%), Gaps = 41/165 (24%)
Query: 681 NLIGVGSFGSVYKGRL--HDG--IEVAIKVFH--QNCAMALKSFEAECEVMKNIRHRNHV 734
++G G FGSV +G L DG ++VA+K + ++ F +E MK+ H N +
Sbjct: 40 KILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVI 99
Query: 735 KRISSCSNED------------FKALDCLHST--NCSLNIFDK-------LNIMIDVASA 773
+ + C F LH+ L K L M+D+A
Sbjct: 100 RLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALG 159
Query: 774 LEYLHFSHSTPVIHCDLKPKN----------VFDFGIG-RLLTGD 807
+EYL + +H DL +N V DFG+ ++ +GD
Sbjct: 160 MEYL---SNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGD 201
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 32.7 bits (73), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 60/153 (39%), Gaps = 36/153 (23%)
Query: 680 ENLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAM-ALKSFEAECEVMKNIRHRN-- 732
+ +IG G FG VY G D I+ AIK + M +++F E +M+ + H N
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 733 -------------HVKRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHF 779
HV C + L + S + + D ++ + VA +EYL
Sbjct: 86 ALIGIMLPPEGLPHVLLPYMCHGD---LLQFIRSPQRNPTVKDLISFGLQVARGMEYL-- 140
Query: 780 SHSTPVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 141 -AEQKFVHRDLAARNCMLDESFTVKVADFGLAR 172
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 32.7 bits (73), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Query: 672 RATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH 730
R K+ IG GSFG +Y G + G EVAIK+ + E + K ++
Sbjct: 6 RVGNKYRLGRKIGSGSFGDIYLGANIASGEEVAIKL--ECVKTKHPQLHIESKFYKMMQG 63
Query: 731 RNHVKRISSCSNE-DFKAL----------DCLHSTNCSLNIFDKLNIMIDVASALEYLHF 779
+ I C E D+ + D + + ++ L + + S +EY+
Sbjct: 64 GVGIPSIKWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYI-- 121
Query: 780 SHSTPVIHCDLKPKNVFDFGIGR 802
HS IH D+KP N F G+G+
Sbjct: 122 -HSKNFIHRDVKPDN-FLMGLGK 142
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 14/70 (20%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE 814
+ + + AL YL H VIH D+KP N+ DFGI L D++ +
Sbjct: 128 KMTVAIVKALYYLKEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA--KDR 183
Query: 815 TLVTIGYMAP 824
+ YMAP
Sbjct: 184 SAGCAAYMAP 193
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE 814
I + + ALE+LH S VIH D+KP NV DFGI L S+ +T
Sbjct: 157 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTI 212
Query: 815 TLVTIGYMAP 824
YMAP
Sbjct: 213 DAGCKPYMAP 222
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 32.3 bits (72), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 80/186 (43%), Gaps = 37/186 (19%)
Query: 671 FRATEKFSKENLIGVGSFGSVYKGRLHD---GIEVAIKVFH---QNCAMALKSFEAECEV 724
F +++ + IG G+ G V D GI VA+K QN A +++ E +
Sbjct: 20 FTVLKRYQQLKPIGSGAQGIVCAA--FDTVLGINVAVKKLSRPFQNQTHAKRAYR-ELVL 76
Query: 725 MKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDK-----LNIMIDVASALEYLHF 779
+K + H+N + ++ + + K L+ + + D +++ +D + YL +
Sbjct: 77 LKCVNHKNIISLLNVFTPQ--KTLEEFQDVYLVMELMDANLCQVIHMELD-HERMSYLLY 133
Query: 780 S--------HSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGY 821
HS +IH DLKP N + DFG+ R T + + T +VT Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR--TACTNFMMTPYVVTRYY 191
Query: 822 MAPGLL 827
AP ++
Sbjct: 192 RAPEVI 197
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH 730
R ++ IG GSFG +Y G + G EVAIK+ + E ++ K ++
Sbjct: 6 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLHIESKIYKMMQG 63
Query: 731 RNHVKRISSCSNE-DFKAL----------DCLHSTNCSLNIFDKLNIMIDVASALEYLHF 779
+ I C E D+ + D + + ++ L + + S +EY+H
Sbjct: 64 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH- 122
Query: 780 SHSTPVIHCDLKPKNVFDFGIGR 802
S IH D+KP N F G+G+
Sbjct: 123 --SKNFIHRDVKPDN-FLMGLGK 142
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 32.3 bits (72), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 5/44 (11%)
Query: 672 RATEKFSKE----NLIGVGSFGSVYKG-RLHDGIEVAIKVFHQN 710
+ E F E L+G G FG+V+ G RL D ++VAIKV +N
Sbjct: 24 KDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRN 67
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 36/191 (18%), Positives = 80/191 (41%), Gaps = 37/191 (19%)
Query: 667 YQDLFRATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKV-----FHQNCAMALKSFEA 720
++D++ E +IG G+F V + G + A+K+ F + ++ + +
Sbjct: 22 FEDVYELCE------VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKR 75
Query: 721 ECEVMKNIRHRNHVKRISSCSNED--FKALDCLHSTNCSLNIFDKLNIMIDVASA----- 773
E + ++H + V+ + + S++ + + + + I + + + A
Sbjct: 76 EASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHY 135
Query: 774 ----LEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETL 816
LE L + H +IH D+KP+NV DFG+ + G+ ++ +
Sbjct: 136 MRQILEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDFGVA-IQLGESGLVAGGRV 194
Query: 817 VTIGYMAPGLL 827
T +MAP ++
Sbjct: 195 GTPHFMAPEVV 205
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 32.3 bits (72), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 77/183 (42%), Gaps = 40/183 (21%)
Query: 674 TEKFSKENLIGVGSFGSVYKGRLHDG--IEVAIKVFHQNCAMALKSFEAECEVMKNIRHR 731
T+ + + IGVGS+ SV K +H +E A+K+ + + + E E++ +R+
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNMEFAVKIIDK----SKRDPTEEIEIL--LRYG 73
Query: 732 NHVKRIS-SCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEYLH 778
H I+ +D K + + + DK+ ++ + +EYLH
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 779 FSHSTPVIHCDLKPKNVF--------------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+ V+H DLKP N+ DFG + L + ++ T T ++AP
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCY-TANFVAP 189
Query: 825 GLL 827
+L
Sbjct: 190 EVL 192
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 32.3 bits (72), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 719 EAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL--NIMIDVASALEY 776
E E E++K + H +K + ED+ + L +FDK+ N + A+ Y
Sbjct: 202 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCKLY 258
Query: 777 LH-------FSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETL 816
+ + H +IH DLKP+NV DFG ++L G+ S+++T
Sbjct: 259 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRT-LC 316
Query: 817 VTIGYMAPGLL 827
T Y+AP +L
Sbjct: 317 GTPTYLAPEVL 327
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 60/141 (42%), Gaps = 14/141 (9%)
Query: 672 RATEKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH 730
R KF IG GSFG +Y G + EVAIK+ +N E ++ + ++
Sbjct: 4 RVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKL--ENVKTKHPQLLYESKIYRILQG 61
Query: 731 RNHVKRISSCSNE-DFKAL--DCLHST------NCSLNIFDKLNIMIDVASALEYLHFSH 781
+ + E D+ L D L + CS + K +M+ + + F H
Sbjct: 62 GTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLML-ADQMINRVEFVH 120
Query: 782 STPVIHCDLKPKNVFDFGIGR 802
S +H D+KP N F G+GR
Sbjct: 121 SKSFLHRDIKPDN-FLMGLGR 140
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 38/184 (20%)
Query: 674 TEKFSKENLIGVGSFGSVY--KGRLHDGIEVAIKVFHQNCAMALKSFEA---ECEVMKNI 728
++++ + +G G++G V K +L G E AIK+ ++ + A E V+K +
Sbjct: 20 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEY 776
H N +K ED + + +FD++ IM V S Y
Sbjct: 79 DHPNIMKLYEFF--EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 136
Query: 777 LHFSHSTPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETLVTIGYMA 823
LH H+ ++H DLKP+N + DFG+ M E L T Y+A
Sbjct: 137 LH-KHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--KERLGTAYYIA 191
Query: 824 PGLL 827
P +L
Sbjct: 192 PEVL 195
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 719 EAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL--NIMIDVASALEY 776
E E E++K + H +K + ED+ + L +FDK+ N + A+ Y
Sbjct: 69 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCKLY 125
Query: 777 LH-------FSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETL 816
+ + H +IH DLKP+NV DFG ++L G+ S+++T
Sbjct: 126 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRT-LC 183
Query: 817 VTIGYMAPGLL 827
T Y+AP +L
Sbjct: 184 GTPTYLAPEVL 194
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 719 EAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL--NIMIDVASALEY 776
E E E++K + H +K + ED+ + L +FDK+ N + A+ Y
Sbjct: 62 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCKLY 118
Query: 777 LH-------FSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETL 816
+ + H +IH DLKP+NV DFG ++L G+ S+++T
Sbjct: 119 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRT-LC 176
Query: 817 VTIGYMAPGLL 827
T Y+AP +L
Sbjct: 177 GTPTYLAPEVL 187
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 719 EAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL--NIMIDVASALEY 776
E E E++K + H +K + ED+ + L +FDK+ N + A+ Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCKLY 119
Query: 777 LH-------FSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETL 816
+ + H +IH DLKP+NV DFG ++L G+ S+++T
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRT-LC 177
Query: 817 VTIGYMAPGLL 827
T Y+AP +L
Sbjct: 178 GTPTYLAPEVL 188
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 719 EAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL--NIMIDVASALEY 776
E E E++K + H +K + ED+ + L +FDK+ N + A+ Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCKLY 119
Query: 777 LH-------FSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETL 816
+ + H +IH DLKP+NV DFG ++L G+ S+++T
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRT-LC 177
Query: 817 VTIGYMAPGLL 827
T Y+AP +L
Sbjct: 178 GTPTYLAPEVL 188
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 76/183 (41%), Gaps = 40/183 (21%)
Query: 674 TEKFSKENLIGVGSFGSVYKGRLHDGI--EVAIKVFHQNCAMALKSFEAECEVMKNIRHR 731
T+ + + IGVGS+ SV K +H E A+K+ + + + E E++ +R+
Sbjct: 21 TDGYEVKEDIGVGSY-SVCKRCIHKATNXEFAVKIIDK----SKRDPTEEIEIL--LRYG 73
Query: 732 NHVKRIS-SCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEYLH 778
H I+ +D K + + + DK+ ++ + +EYLH
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 779 FSHSTPVIHCDLKPKNVF--------------DFGIGRLLTGDRSMIQTETLVTIGYMAP 824
+ V+H DLKP N+ DFG + L + ++ T T ++AP
Sbjct: 134 ---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPCY-TANFVAP 189
Query: 825 GLL 827
+L
Sbjct: 190 EVL 192
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 672 RATEKFSKENLIGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH 730
R ++ IG GSFG +Y G + G EVAIK+ + E ++ K ++
Sbjct: 4 RVGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKL--ECVKTKHPQLHIESKIYKMMQG 61
Query: 731 RNHVKRISSCSNE-DFKAL----------DCLHSTNCSLNIFDKLNIMIDVASALEYLHF 779
+ I C E D+ + D + + ++ L + + S +EY+H
Sbjct: 62 GVGIPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH- 120
Query: 780 SHSTPVIHCDLKPKNVFDFGIGR 802
S IH D+KP N F G+G+
Sbjct: 121 --SKNFIHRDVKPDN-FLMGLGK 140
>pdb|4B8C|D Chain D, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|J Chain J, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|K Chain K, Nuclease Module Of The Yeast Ccr4-Not Complex
pdb|4B8C|L Chain L, Nuclease Module Of The Yeast Ccr4-Not Complex
Length = 727
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 9/73 (12%)
Query: 454 LNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTF---WNLKDILFFDLSSN 510
L L L GN + +P+ + NL++LR DL NRLTS LP+ + LK FFD
Sbjct: 249 LTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLTS-LPAELGSCFQLKYFYFFD---- 302
Query: 511 SLDGPLSLDIGNL 523
++ L + GNL
Sbjct: 303 NMVTTLPWEFGNL 315
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 719 EAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL--NIMIDVASALEY 776
E E E++K + H +K + ED+ + L +FDK+ N + A+ Y
Sbjct: 188 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCKLY 244
Query: 777 LH-------FSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETL 816
+ + H +IH DLKP+NV DFG ++L G+ S+++T
Sbjct: 245 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRT-LC 302
Query: 817 VTIGYMAPGLL 827
T Y+AP +L
Sbjct: 303 GTPTYLAPEVL 313
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 27/131 (20%)
Query: 719 EAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL--NIMIDVASALEY 776
E E E++K + H +K + ED+ + L +FDK+ N + A+ Y
Sbjct: 63 ETEIEILKKLNHPCIIKIKNFFDAEDYYIVLELMEGG---ELFDKVVGNKRLKEATCKLY 119
Query: 777 LH-------FSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETL 816
+ + H +IH DLKP+NV DFG ++L G+ S+++T
Sbjct: 120 FYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL-GETSLMRT-LC 177
Query: 817 VTIGYMAPGLL 827
T Y+AP +L
Sbjct: 178 GTPTYLAPEVL 188
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 13/135 (9%)
Query: 683 IGVGSFGSV-YKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISS-- 739
IG GS G V H G +VA+K + E +M++ H N V SS
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 740 CSNEDFKALDCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
+E + ++ L T+ +N + + V AL YLH + VIH D+K
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLH---NQGVIHRDIKS 169
Query: 793 KNVFDFGIGRLLTGD 807
++ GR+ D
Sbjct: 170 DSILLTSDGRIKLSD 184
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 683 IGVGSFGSVYKGRLHD--GIEVAIKVFHQNCAMALK---SFEAECEVMKNIRHRNHVKRI 737
+G GSFG V K H G +VA+K+ ++ E E ++ +RH + +K
Sbjct: 16 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 74
Query: 738 SSCSNEDFKALDCLHSTNCSLNIFDKLNIMID---------VASALEYLHFSHSTPVIHC 788
++D + ++ N + + + M + + SA+EY H ++H
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY---CHRHKIVHR 131
Query: 789 DLKPKN----------VFDFGIGRLLT 805
DLKP+N + DFG+ ++T
Sbjct: 132 DLKPENLLLDEHLNVKIADFGLSNIMT 158
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 83 KEF-NCHHVVRL 93
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 12/53 (22%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
I + + ALE+LH S VIH D+KP NV DFGI L D
Sbjct: 140 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 23 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 82
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 83 KEF-NCHHVVRL 93
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 81/193 (41%), Gaps = 32/193 (16%)
Query: 421 PVTFGRLQKLQGLYLPFNKLAGSIPDQLCH-LARLNTLGLAGNKFSGSIPSCLGNLTSLR 479
P F + L L L N L+ S+P + H +L TL ++ N TSL+
Sbjct: 110 PHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 168
Query: 480 SPDLGSNRLT----SVLPSTF-----WNLKDILFFDLSSNSLD----------GPLSLDI 520
+ L SNRLT S++PS F +NL L ++ LD GP+++++
Sbjct: 169 NLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL 228
Query: 521 GNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF---GYLTELNLS 577
L+ L NN + + + + L + L+ N LE ++ F L L +S
Sbjct: 229 TILK------LQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 280
Query: 578 FNKLEGEIPRGGP 590
N+L G P
Sbjct: 281 NNRLVALNLYGQP 293
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 64/147 (43%), Gaps = 28/147 (19%)
Query: 683 IGVGSFGSVYKGRLHD--GIEVAIKVFHQNCAMALK---SFEAECEVMKNIRHRNHVKRI 737
+G GSFG V K H G +VA+K+ ++ E E ++ +RH + +K
Sbjct: 12 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 70
Query: 738 SSCSNEDFKALDCLHSTNCSLNIFDKLNIMID---------VASALEYLHFSHSTPVIHC 788
++D + ++ N + + + M + + SA+EY H ++H
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY---CHRHKIVHR 127
Query: 789 DLKPKN----------VFDFGIGRLLT 805
DLKP+N + DFG+ ++T
Sbjct: 128 DLKPENLLLDEHLNVKIADFGLSNIMT 154
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 66/149 (44%), Gaps = 32/149 (21%)
Query: 683 IGVGSFGSVYKGRLHD--GIEVAIKVFHQNCAMALKS-----FEAECEVMKNIRHRNHVK 735
+G GSFG V K H G +VA+K+ N + KS E E ++ +RH + +K
Sbjct: 22 LGEGSFGKV-KLAYHTTTGQKVALKII--NKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 736 RISSCSNEDFKALDCLHSTNCSLNIFDKLNIMID---------VASALEYLHFSHSTPVI 786
++D + ++ N + + + M + + SA+EY H ++
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY---CHRHKIV 135
Query: 787 HCDLKPKN----------VFDFGIGRLLT 805
H DLKP+N + DFG+ ++T
Sbjct: 136 HRDLKPENLLLDEHLNVKIADFGLSNIMT 164
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 71/177 (40%), Gaps = 31/177 (17%)
Query: 675 EKFSKENLIGVGSFGSVYKG-RLHDGIEVAIKVFH-QNCAMALKSFEAECEVMKNIRHRN 732
E F+K + IG GSFG VYKG H VAIK+ + ++ + E V+
Sbjct: 19 ELFTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQC-DSP 77
Query: 733 HVKRISSCSNEDFK------------ALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFS 780
++ R + K ALD L I+ ++ L+YL
Sbjct: 78 YITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI--ATILREILKGLDYL--- 132
Query: 781 HSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
HS IH D+K NV DFG+ LT D + + + T +MAP ++
Sbjct: 133 HSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT-DTQIKRNXFVGTPFWMAPEVI 188
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 12/53 (22%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807
I + + ALE+LH S VIH D+KP NV DFGI L D
Sbjct: 113 KIAVSIVKALEHLHSKLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA ++YL S
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 170
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 171 KFVHRDLAARNCMLDEKFTVKVADFGLAR 199
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 34/178 (19%)
Query: 677 FSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNC--AMALK----SFEAECEVMKNIRH 730
F + +G G+F V + K+F C ALK S E E V++ I+H
Sbjct: 24 FEFKETLGTGAFSEVVLAEE----KATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKH 79
Query: 731 RNHV--KRISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASAL-----EYLHFSHST 783
N V + I N + + + I +K AS L + +++ H
Sbjct: 80 ENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRM 139
Query: 784 PVIHCDLKPKNVF-------------DFGIGRLL-TGDRSMIQTETLVTIGYMAPGLL 827
++H DLKP+N+ DFG+ ++ GD + + T GY+AP +L
Sbjct: 140 GIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGD---VMSTACGTPGYVAPEVL 194
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 683 IGVGSFGSVYKGRLH-DGIEVAIKVFHQNC------AMALKSFEAECEVMKNIRHRNHVK 735
+G G F V K R G E A K + ++ + E E +++ IRH N +
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 736 RISSCSNEDFKALDCLHSTNCSLNIF--DKLNIMIDVASA-----LEYLHFSHSTPVIHC 788
N+ L + L F +K ++ D A+ L+ +H+ HS + H
Sbjct: 94 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHF 153
Query: 789 DLKPKNV 795
DLKP+N+
Sbjct: 154 DLKPENI 160
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA ++YL S
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 171
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 172 KFVHRDLAARNCMLDEKFTVKVADFGLAR 200
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 76 KEF-NCHHVVRL 86
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 76/169 (44%), Gaps = 30/169 (17%)
Query: 683 IGVGSFGSVYKGRLHD--GIEVAIKVFHQNCAMALK---SFEAECEVMKNIRHRNHVKRI 737
+G GSFG V K H G +VA+K+ ++ E E ++ +RH + +K
Sbjct: 21 LGEGSFGKV-KLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY 79
Query: 738 SSCSNEDFKALDCLHSTNCSLNIFDKLNIMID---------VASALEYLHFSHSTPVIHC 788
++D + ++ N + + + M + + SA+EY H ++H
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEY---CHRHKIVHR 136
Query: 789 DLKPKN----------VFDFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
DLKP+N + DFG+ ++T D + ++T + + Y AP ++
Sbjct: 137 DLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKT-SCGSPNYAAPEVI 183
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 13 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 72
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 73 KEF-NCHHVVRL 83
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 31.6 bits (70), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 27/161 (16%)
Query: 655 RGGKSKTLRRFSYQDLFRATEK--FSKENLIGVGSFGSV-YKGRLHDGIEVAIK-VFHQN 710
RGGK R + F + K E ++G GS G+V ++G G VA+K +
Sbjct: 11 RGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDF 69
Query: 711 CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL----------DCLHSTNCS--- 757
C +AL + E + H N ++ S + + F + D + S N S
Sbjct: 70 CDIALMEIKLLTE---SDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDEN 126
Query: 758 ---LNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
++ ++++ +AS + +LH S +IH DLKP+N+
Sbjct: 127 LKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNI 164
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 8 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 67
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 68 KEF-NCHHVVRL 78
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/166 (23%), Positives = 72/166 (43%), Gaps = 23/166 (13%)
Query: 683 IGVGSFGSVYKGRLHDGIEV-AIKVFH-QNCAM--ALKSFEAECEVMKNIRHRNHVKRIS 738
IG GSFG V + +D ++ A+K + Q C +++ E ++M+ + H V
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWY 82
Query: 739 SCSNED--FKALDCLHSTNCSLNI-----FDKLNIMIDVASALEYLHFSHSTPVIHCDLK 791
S +E+ F +D L + ++ F + + + + + L + + +IH D+K
Sbjct: 83 SFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMK 142
Query: 792 PKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
P N+ DF I +L + + T T YMAP +
Sbjct: 143 PDNILLDEHGHVHITDFNIAAMLPRETQI--TTMAGTKPYMAPEMF 186
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 14 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 73
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 74 KEF-NCHHVVRL 84
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 70 KEF-NCHHVVRL 80
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 77 KEF-NCHHVVRL 87
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA ++YL S
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 144
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 145 KFVHRDLAARNCMLDEKFTVKVADFGLAR 173
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 31.6 bits (70), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 10 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 69
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 70 KEF-NCHHVVRL 80
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGRLLTGDRSMI 811
++ + +EYLH S V+H DLKP N+ DFG + L + ++
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 812 QTETLVTIGYMAPGLL 827
T T ++AP +L
Sbjct: 183 MT-PCYTANFVAPEVL 197
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 84/217 (38%), Gaps = 66/217 (30%)
Query: 669 DLFRATE----KFSKENLI-----GVGSFGSVYK-------GRLHDGIEVAIKVFHQNCA 712
D F+ E +F ++NL+ G G FG V K GR VA+K+ +N +
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRA-GYTTVAVKMLKENAS 66
Query: 713 MA-LKSFEAECEVMKNIRHRNHVKRISSCSNE-------DFKALDCL------------- 751
+ L+ +E V+K + H + +K +CS + ++ L
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPG 126
Query: 752 --------------HSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF- 796
H +L + D ++ ++ ++YL ++H DL +N+
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILV 183
Query: 797 ---------DFGIGR-LLTGDRSMIQTETLVTIGYMA 823
DFG+ R + D + +++ + + +MA
Sbjct: 184 AEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 17 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 76
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 77 KEF-NCHHVVRL 87
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 84/217 (38%), Gaps = 66/217 (30%)
Query: 669 DLFRATE----KFSKENLI-----GVGSFGSVYK-------GRLHDGIEVAIKVFHQNCA 712
D F+ E +F ++NL+ G G FG V K GR VA+K+ +N +
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRA-GYTTVAVKMLKENAS 66
Query: 713 MA-LKSFEAECEVMKNIRHRNHVKRISSCSNE-------DFKALDCL------------- 751
+ L+ +E V+K + H + +K +CS + ++ L
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPG 126
Query: 752 --------------HSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF- 796
H +L + D ++ ++ ++YL ++H DL +N+
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILV 183
Query: 797 ---------DFGIGR-LLTGDRSMIQTETLVTIGYMA 823
DFG+ R + D + +++ + + +MA
Sbjct: 184 AEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMA 220
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 45 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 104
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 105 KEF-NCHHVVRL 115
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGRLLTGDRSMI 811
++ + +EYLH S V+H DLKP N+ DFG + L + ++
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 812 QTETLVTIGYMAPGLL 827
T T ++AP +L
Sbjct: 183 MT-PCYTANFVAPEVL 197
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 15/71 (21%)
Query: 770 VASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETL 816
+ LE +++ H ++H DLKP+N+ DFG+ R + G ++ E +
Sbjct: 137 IKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI-GHACELR-EIM 194
Query: 817 VTIGYMAPGLL 827
T Y+AP +L
Sbjct: 195 GTPEYLAPEIL 205
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 72/161 (44%), Gaps = 27/161 (16%)
Query: 655 RGGKSKTLRRFSYQDLFRATEK--FSKENLIGVGSFGSV-YKGRLHDGIEVAIK-VFHQN 710
RGGK R + F + K E ++G GS G+V ++G G VA+K +
Sbjct: 11 RGGKKGRKSRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDF 69
Query: 711 CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL----------DCLHSTNCS--- 757
C +AL + E + H N ++ S + + F + D + S N S
Sbjct: 70 CDIALMEIKLLTE---SDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDEN 126
Query: 758 ---LNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
++ ++++ +AS + +LH S +IH DLKP+N+
Sbjct: 127 LKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNI 164
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 31.6 bits (70), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVY----KGRLHDGIE--VAIKVFHQNCAMALK-SFEAECEVM 725
A EK + +G GSFG VY KG + D E VAIK ++ +M + F E VM
Sbjct: 16 AREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVM 75
Query: 726 KNIRHRNHVKRI 737
K + +HV R+
Sbjct: 76 KEF-NCHHVVRL 86
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 165 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 220
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 221 -TTPCYTPYYVAPEVL 235
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 43/217 (19%), Positives = 85/217 (39%), Gaps = 66/217 (30%)
Query: 669 DLFRATE----KFSKENLI-----GVGSFGSVYK-------GRLHDGIEVAIKVFHQNCA 712
D F+ E +F ++NL+ G G FG V K GR VA+K+ +N +
Sbjct: 8 DAFKILEDPKWEFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRA-GYTTVAVKMLKENAS 66
Query: 713 MA-LKSFEAECEVMKNIRHRNHVKRISSCSNE-------DFKALDCL------------- 751
+ L+ +E V+K + H + +K +CS + ++ L
Sbjct: 67 PSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPG 126
Query: 752 --------------HSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF- 796
H +L + D ++ ++ ++YL ++H DL +N+
Sbjct: 127 YLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILV 183
Query: 797 ---------DFGIGRLLTGDRSMIQ-TETLVTIGYMA 823
DFG+ R + + S ++ ++ + + +MA
Sbjct: 184 AEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMA 220
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 72
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 166
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 80/192 (41%), Gaps = 51/192 (26%)
Query: 680 ENLIGVGSFGSV-YKGRLHDGIEVAIK-VFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
E ++G GS G+V ++G G VA+K + C +AL + E + H N ++
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRYY 75
Query: 738 SSCSNEDFKAL----------DCLHSTNCS------LNIFDKLNIMIDVASALEYLHFSH 781
S + + F + D + S N S ++ ++++ +AS + +LH
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH--- 132
Query: 782 STPVIHCDLKPKNVF-----------------------DFGIGRLLTGDRSMIQT---ET 815
S +IH DLKP+N+ DFG+ + L +S +T
Sbjct: 133 SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNP 192
Query: 816 LVTIGYMAPGLL 827
T G+ AP LL
Sbjct: 193 SGTSGWRAPELL 204
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 127 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 182
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 183 -TTPCYTPYYVAPEVL 197
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 171 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 226
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 227 -TTPCYTPYYVAPEVL 241
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 125 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 180
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 181 -TTPCYTPYYVAPEVL 195
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 26/179 (14%)
Query: 675 EKFSKENLIGVGSFGSVYKGRL---HD-GIEVAIKVFHQNC----AMALKSFEAECEVMK 726
E F ++G G++G V+ R HD G A+KV + A + E +V++
Sbjct: 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE 113
Query: 727 NIRHRNHVKRISSCSNEDFK---ALDCLHSTNCSLNI-----FDKLNIMIDVASALEYLH 778
+IR + + + K LD ++ ++ F + + I V + L
Sbjct: 114 HIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALE 173
Query: 779 FSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
H +I+ D+K +N+ DFG+ + D + + TI YMAP ++
Sbjct: 174 HLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 126 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 181
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 182 -TTPCYTPYYVAPEVL 196
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 176
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 177 -TTPCYTPYYVAPEVL 191
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 38 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 94
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 95 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 154
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 155 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 188
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 683 IGVGSFGSVYKGRLH-DGIEVAIKVFHQNC------AMALKSFEAECEVMKNIRHRNHVK 735
+G G F V K R G E A K + ++ + E E +++ IRH N +
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 736 RISSCSNEDFKALDCLHSTNCSLNIF--DKLNIMIDVASA-----LEYLHFSHSTPVIHC 788
N+ L + L F +K ++ D A+ L+ +H+ HS + H
Sbjct: 73 LHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAHF 132
Query: 789 DLKPKNV 795
DLKP+N+
Sbjct: 133 DLKPENI 139
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 63 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 119
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 120 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 179
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 180 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 213
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA ++YL S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 152
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 135 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 190
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 191 -TTPCYTPYYVAPEVL 205
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 114
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 176
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 177 -TTPCYTPYYVAPEVL 191
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 33/71 (46%), Gaps = 15/71 (21%)
Query: 770 VASALEYLHFSHSTPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETL 816
V LE + + H ++H DLKP+N + DFG+ +++ + ++
Sbjct: 154 VKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIV--EHQVLMKTVC 211
Query: 817 VTIGYMAPGLL 827
T GY AP +L
Sbjct: 212 GTPGYCAPEIL 222
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 120 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 175
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 176 -TTPCYTPYYVAPEVL 190
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 18/76 (23%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM + A++YLH S + H D+KP+N+ DFG + T S+
Sbjct: 119 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSL- 174
Query: 812 QTETLVTIGYMAPGLL 827
T T Y+AP +L
Sbjct: 175 -TTPCYTPYYVAPEVL 189
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA ++YL S
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 149
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 150 KFVHRDLAARNCMLDEKFTVKVADFGLAR 178
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 50 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 106
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 107 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 166
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 167 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 200
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 31.2 bits (69), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 100
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 58/149 (38%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 736 RISSCSNEDFKALDCL------------HSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
+ C + L L + + + D + + VA ++YL S
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 151
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 63/134 (47%), Gaps = 25/134 (18%)
Query: 680 ENLIGVGSFGSV-YKGRLHDGIEVAIK-VFHQNCAMALKSFEAECEVMKNIRHRNHVKRI 737
E ++G GS G+V ++G G VA+K + C +AL + E + H N ++
Sbjct: 20 EKILGYGSSGTVVFQGSFQ-GRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVIRYY 75
Query: 738 SSCSNEDFKAL----------DCLHSTNCS------LNIFDKLNIMIDVASALEYLHFSH 781
S + + F + D + S N S ++ ++++ +AS + +LH
Sbjct: 76 CSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH--- 132
Query: 782 STPVIHCDLKPKNV 795
S +IH DLKP+N+
Sbjct: 133 SLKIIHRDLKPQNI 146
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 100
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 58 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 114
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 115 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 174
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 175 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 208
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 99
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 100
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 31.2 bits (69), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 54/184 (29%)
Query: 681 NLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVKRIS 738
+++G G+F V + VAIK + + S E E V+ I+H N V
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIV---- 79
Query: 739 SCSNEDFKALDCLHSTNCSL----------NIFDKL------------NIMIDVASALEY 776
ALD ++ + L +FD++ ++ V A++Y
Sbjct: 80 --------ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 777 LHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
LH ++H DLKP+N+ DFG+ ++ D + + T GY+A
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVA 186
Query: 824 PGLL 827
P +L
Sbjct: 187 PEVL 190
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 44 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 100
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 101 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 160
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 161 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 194
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 99
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
>pdb|2WFH|A Chain A, The Human Slit 2 Dimerization Domain D4
pdb|2WFH|B Chain B, The Human Slit 2 Dimerization Domain D4
Length = 193
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Query: 433 LYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVL 492
LYL N+ +P +L + L + L+ N+ S N+T L + L NRL +
Sbjct: 36 LYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIP 94
Query: 493 PSTFWNLKDILFFDLSSNSL 512
P TF LK + L N +
Sbjct: 95 PRTFDGLKSLRLLSLHGNDI 114
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 64/157 (40%), Gaps = 40/157 (25%)
Query: 683 IGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVK 735
+G G+FG VY+G++ ++VA+K + + + F E ++ H+N V+
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 736 RI--SSCSNEDFKALDCLH---------------STNCSLNIFDKLNIMIDVASALEYLH 778
I S S F L+ + S SL + D L++ D+A +YL
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE 172
Query: 779 FSHSTPVIHCDLKPKNVF-------------DFGIGR 802
+H IH D+ +N DFG+ R
Sbjct: 173 ENH---FIHRDIAARNCLLTCPGPGRVAKIGDFGMAR 206
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 87
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 181
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 87
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 181
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 31.2 bits (69), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 65/164 (39%), Gaps = 44/164 (26%)
Query: 680 ENLIGVGSFGSVYKGRL-HDG--IEVAIKVFHQNCAM-ALKSFEAECEVMKNIRHR-NHV 734
+++IG G+FG V K R+ DG ++ AIK + + + F E EV+ + H N +
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 735 KRISSCSNEDF--------------------------KALDCLHSTNCSLNIFDKLNIMI 768
+ +C + + A +ST +L+ L+
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 769 DVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802
DVA ++YL IH +L +N+ DFG+ R
Sbjct: 147 DVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSR 187
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA ++YL S
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 147
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 148 KFVHRDLAARNCMLDEKFTVKVADFGLAR 176
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA ++YL S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 152
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 99
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
>pdb|3ZYN|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
pdb|3ZYN|B Chain B, Crystal Structure Of The N-Terminal Leucine Rich Repeats
Of Netrin-G Ligand-3
Length = 321
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 444 IPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDIL 503
IP+ L L RL L L+GN+ P LTSLR L ++ ++ + F +LK +
Sbjct: 171 IPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLE 229
Query: 504 FFDLSSNSL 512
+LS N+L
Sbjct: 230 ELNLSHNNL 238
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 54/184 (29%)
Query: 681 NLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVKRIS 738
+++G G+F V + VAIK + + S E E V+ I+H N V
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV---- 79
Query: 739 SCSNEDFKALDCLHSTNCSL----------NIFDKL------------NIMIDVASALEY 776
ALD ++ + L +FD++ ++ V A++Y
Sbjct: 80 --------ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 777 LHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
LH ++H DLKP+N+ DFG+ ++ D + + T GY+A
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVA 186
Query: 824 PGLL 827
P +L
Sbjct: 187 PEVL 190
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 31.2 bits (69), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA ++YL S
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 150
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 151 KFVHRDLAARNCMLDEKFTVKVADFGLAR 179
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 43 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 99
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 100 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 159
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 160 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 193
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 86
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 180
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 31 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 87
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 88 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 147
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 148 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 181
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 15 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 71
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 72 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 131
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 132 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 165
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 54/184 (29%)
Query: 681 NLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVKRIS 738
+++G G+F V + VAIK + + S E E V+ I+H N V
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV---- 79
Query: 739 SCSNEDFKALDCLHSTNCSL----------NIFDKL------------NIMIDVASALEY 776
ALD ++ + L +FD++ ++ V A++Y
Sbjct: 80 --------ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 777 LHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
LH ++H DLKP+N+ DFG+ ++ D + + T GY+A
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVA 186
Query: 824 PGLL 827
P +L
Sbjct: 187 PEVL 190
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA ++YL S
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL---ASK 151
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 152 KFVHRDLAARNCMLDEKFTVKVADFGLAR 180
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 31.2 bits (69), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 72
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 166
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 16 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 72
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 73 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 132
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 133 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 166
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 73/184 (39%), Gaps = 54/184 (29%)
Query: 681 NLIGVGSFGSVYKGRLHDGIE-VAIKVFHQNCAMALK-SFEAECEVMKNIRHRNHVKRIS 738
+++G G+F V + VAIK + + S E E V+ I+H N V
Sbjct: 24 DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIV---- 79
Query: 739 SCSNEDFKALDCLHSTNCSL----------NIFDKL------------NIMIDVASALEY 776
ALD ++ + L +FD++ ++ V A++Y
Sbjct: 80 --------ALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 777 LHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTETLVTIGYMA 823
LH ++H DLKP+N+ DFG+ ++ D + + T GY+A
Sbjct: 132 LH---DLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVA 186
Query: 824 PGLL 827
P +L
Sbjct: 187 PEVL 190
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 30 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 86
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 87 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 146
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 147 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 180
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 25/130 (19%)
Query: 683 IGVGSFGSVYKGRLHDG-IEVAIKVFHQNCAM---ALKSFEAECEVMKNIRHRN------ 732
+G G FG+VY R VA+KV ++ E E+ ++ H N
Sbjct: 31 LGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYN 90
Query: 733 ---HVKRIS-----SCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTP 784
+RI + E +K L +C+ + IM ++A AL Y H
Sbjct: 91 YFYDRRRIYLILEYAPRGELYKEL----QKSCTFDEQRTATIMEELADALMY---CHGKK 143
Query: 785 VIHCDLKPKN 794
VIH D+KP+N
Sbjct: 144 VIHRDIKPEN 153
>pdb|3ZYO|A Chain A, Crystal Structure Of The N-Terminal Leucine Rich Repeats
And Immunoglobulin Domain Of Netrin-G Ligand-3
Length = 411
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 444 IPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDIL 503
IP+ L L RL L L+GN+ P LTSLR L ++ ++ + F +LK +
Sbjct: 171 IPN-LTALVRLEELELSGNRLDLIRPGSFQGLTSLRKLWLMHAQVATIERNAFDDLKSLE 229
Query: 504 FFDLSSNSL 512
+LS N+L
Sbjct: 230 ELNLSHNNL 238
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 60/156 (38%), Gaps = 29/156 (18%)
Query: 680 ENLIGVGSFGSVYKGRL----HDGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRN-- 732
E +IG G FG V G L I VAIK + F +E +M H N
Sbjct: 12 EQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVI 71
Query: 733 HVKRISSCSNE--------DFKALDC-LHSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
H++ + + S + +LD L + + + ++ +A+ ++YL
Sbjct: 72 HLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYL---ADM 128
Query: 784 PVIHCDLKPKNVF----------DFGIGRLLTGDRS 809
+H L +N+ DFG+ R L D S
Sbjct: 129 NYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTS 164
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 76/184 (41%), Gaps = 38/184 (20%)
Query: 674 TEKFSKENLIGVGSFGSVY--KGRLHDGIEVAIKVFHQNCAMALKSFEA---ECEVMKNI 728
++++ + +G G++G V K +L G E AIK+ ++ + A E V+K +
Sbjct: 3 SDRYQRVKKLGSGAYGEVLLCKDKL-TGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 61
Query: 729 RHRNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL------------NIMIDVASALEY 776
H N +K ED + + +FD++ IM V S Y
Sbjct: 62 DHPNIMKLYEFF--EDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTY 119
Query: 777 LHFSHSTPVIHCDLKPKN-------------VFDFGIGRLLTGDRSMIQTETLVTIGYMA 823
LH H+ ++H DLKP+N + DFG+ M E L T Y+A
Sbjct: 120 LH-KHN--IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKM--KERLGTAYYIA 174
Query: 824 PGLL 827
P +L
Sbjct: 175 PEVL 178
>pdb|2ID5|A Chain A, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|B Chain B, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|C Chain C, Crystal Structure Of The Lingo-1 Ectodomain
pdb|2ID5|D Chain D, Crystal Structure Of The Lingo-1 Ectodomain
Length = 477
Score = 30.8 bits (68), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 32/75 (42%)
Query: 438 NKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFW 497
N++ D+ L L L N S P NL +LR+ L SNRL + F
Sbjct: 42 NRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFT 101
Query: 498 NLKDILFFDLSSNSL 512
L ++ D+S N +
Sbjct: 102 GLSNLTKLDISENKI 116
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 19/76 (25%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM D+ +A+++LH SH+ + H D+KP+N+ DFG + T ++ +
Sbjct: 113 EIMRDIGTAIQFLH-SHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNAL 167
Query: 812 QTETLVTIGYMAPGLL 827
QT T Y+AP +L
Sbjct: 168 QT-PCYTPYYVAPEVL 182
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 30.8 bits (68), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 19/76 (25%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMI 811
IM D+ +A+++LH SH+ + H D+KP+N+ DFG + T ++ +
Sbjct: 132 EIMRDIGTAIQFLH-SHN--IAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETT--QNAL 186
Query: 812 QTETLVTIGYMAPGLL 827
QT T Y+AP +L
Sbjct: 187 QT-PCYTPYYVAPEVL 201
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 748 LDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------- 796
D + + + ++ + +N M L+++H HS ++H D+KP+N+
Sbjct: 136 FDRIAAEDYKMSEAEVINYMRQACEGLKHMH-EHS--IVHLDIKPENIMCETKKASSVKI 192
Query: 797 -DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827
DFG+ L D I T T + AP ++
Sbjct: 193 IDFGLATKLNPDE--IVKVTTATAEFAAPEIV 222
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 16/57 (28%)
Query: 765 NIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDR 808
IM + A++YLH S + H D+KP+N+ DFG + TG++
Sbjct: 121 EIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTGEK 174
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIK 705
L+G G FGSVY G R+ D + VAIK
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK 35
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIK 705
L+G G FGSVY G R+ D + VAIK
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK 35
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 30.8 bits (68), Expect = 3.4, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 18/25 (72%), Gaps = 1/25 (4%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIK 705
L+G G FGSVY G R+ D + VAIK
Sbjct: 11 LLGSGGFGSVYSGIRVSDNLPVAIK 35
>pdb|1ZIW|A Chain A, Human Toll-Like Receptor 3 Extracellular Domain Structure
Length = 680
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 41/99 (41%)
Query: 414 NKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLG 473
N+L F R +L L + FN ++ P+ L L L L N+ S
Sbjct: 35 NQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFA 94
Query: 474 NLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSL 512
T+L L SN + + + F K+++ DLS N L
Sbjct: 95 FCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL 133
>pdb|2IFG|A Chain A, Structure Of The Extracellular Segment Of Human Trka In
Complex With Nerve Growth Factor
pdb|2IFG|B Chain B, Structure Of The Extracellular Segment Of Human Trka In
Complex With Nerve Growth Factor
Length = 347
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 547 LKDLQNISLACNGLEGLIPESFGY---LTELNLSFNKLE 582
L +L+N+++ +GL + P++F + L+ LNLSFN LE
Sbjct: 55 LGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALE 93
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 60/154 (38%), Gaps = 34/154 (22%)
Query: 682 LIGVGSFGSVYKG-RLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSC 740
L+G G FGSVY G R+ D + VAIK ++ V + +K++SS
Sbjct: 14 LLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEV---VLLKKVSSG 70
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDV-------------------ASALEYLHFSH 781
+ + LD + + I ++ + D+ LE + H
Sbjct: 71 FSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH 130
Query: 782 STPVIHCDLKPKNVF-----------DFGIGRLL 804
+ V+H D+K +N+ DFG G LL
Sbjct: 131 NCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 164
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 30.4 bits (67), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/186 (22%), Positives = 75/186 (40%), Gaps = 17/186 (9%)
Query: 170 SSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFK 229
++ LD+ +S K LP + + L L L+L N +K L LNL
Sbjct: 30 TTYLDLETNSLK---SLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86
Query: 230 KLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPXXXXXXXXXXXXXXXXPAAIFN 289
+L LT L++++L N+L+ +P + P +F+
Sbjct: 87 QLQSLPNGVFDKLTQLKELALNTNQLQ-SLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFD 145
Query: 290 -MSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMG 348
+++++ I+L DN D + P + L+ +N+ SG + N++ V D
Sbjct: 146 RLTSLQYIWLHDNPW--------DCTCPGIRYLSEWINKHSG----VVRNSAGSVAPDSA 193
Query: 349 TNSFSG 354
S SG
Sbjct: 194 KCSGSG 199
>pdb|2A0Z|A Chain A, The Molecular Structure Of Toll-like Receptor 3 Ligand
Binding Domain
Length = 705
Score = 30.4 bits (67), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 41/99 (41%)
Query: 414 NKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLG 473
N+L F R +L L + FN ++ P+ L L L L N+ S
Sbjct: 40 NQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFA 99
Query: 474 NLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSL 512
T+L L SN + + + F K+++ DLS N L
Sbjct: 100 FCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL 138
>pdb|3ULU|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form1)
pdb|3ULV|A Chain A, Structure Of Quaternary Complex Of Human Tlr3ecd With
Three Fabs (Form2)
Length = 694
Score = 30.4 bits (67), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 41/99 (41%)
Query: 414 NKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLG 473
N+L F R +L L + FN ++ P+ L L L L N+ S
Sbjct: 45 NQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFA 104
Query: 474 NLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSL 512
T+L L SN + + + F K+++ DLS N L
Sbjct: 105 FCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGL 143
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 30.4 bits (67), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 81/184 (44%), Gaps = 32/184 (17%)
Query: 421 PVTFGRLQKLQGLYLPFNKLAGSIPDQLCH-LARLNTLGLAGNKFSGSIPSCLGNLTSLR 479
P F + L L L N L+ S+P + H +L TL ++ N TSL+
Sbjct: 116 PHVFQNVPLLTVLVLERNDLS-SLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 174
Query: 480 SPDLGSNRLT----SVLPSTF-----WNLKDILF-------FDLSSNSLD---GPLSLDI 520
+ L SNRLT S++PS F +NL L D S NS++ GP+++++
Sbjct: 175 NLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVEL 234
Query: 521 GNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF---GYLTELNLS 577
L+ L NN + + + + L + L+ N LE ++ F L L +S
Sbjct: 235 TILK------LQHNNLTD--TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYIS 286
Query: 578 FNKL 581
N+L
Sbjct: 287 NNRL 290
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 43/101 (42%), Gaps = 2/101 (1%)
Query: 413 GNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLC-HLARLNTLGLAGNKFSGSIPSC 471
GN+L F +L L+ L L N+L S+PD + L L L LA N+
Sbjct: 94 GNQLQSLPNGVFDKLTNLKELVLVENQLQ-SLPDGVFDKLTNLTYLNLAHNQLQSLPKGV 152
Query: 472 LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSL 512
LT+L DL N+L S+ F L + L N L
Sbjct: 153 FDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQL 193
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 62/149 (41%), Gaps = 12/149 (8%)
Query: 186 LPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEI-SNLTI 244
LP + + L LK L L +N K L LNL +L ++PK + LT
Sbjct: 100 LPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQ-SLPKGVFDKLTN 158
Query: 245 LRKISLRNNKLRGEIPHEIGYLPXXXXXXXXXXXXXXXXPAAIFN-MSTVKKIYLLDNSL 303
L ++ L N+L+ +P + P +F+ +++++ I+L DN
Sbjct: 159 LTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPW 217
Query: 304 LGSFSLGIDLSLPNVERLNLGLNRFSGTI 332
D + P + L+ +N+ SG +
Sbjct: 218 --------DCTCPGIRYLSEWINKHSGVV 238
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 54/128 (42%), Gaps = 2/128 (1%)
Query: 448 LCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDL 507
L L L L L GN+ LT+L+ L N+L S+ F L ++ + +L
Sbjct: 81 LKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNL 140
Query: 508 SSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGD-LKDLQNISLACNGLEGLIPE 566
+ N L L + ++LS N +P + D L L+++ L N L+ +
Sbjct: 141 AHNQLQSLPKGVFDKLTNLTELDLSYNQLQS-LPEGVFDKLTQLKDLRLYQNQLKSVPDG 199
Query: 567 SFGYLTEL 574
F LT L
Sbjct: 200 VFDRLTSL 207
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 58/138 (42%), Gaps = 26/138 (18%)
Query: 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKS-----FEAECEVMKNIR 729
EK+ +G G FG V H +E + K + + +K + E ++ R
Sbjct: 5 EKYMIAEDLGRGEFGIV-----HRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIAR 59
Query: 730 HRN--HVKRISSCSNEDFKALDCLHSTNCSLNIFDKLN----------IMIDVASALEYL 777
HRN H+ S E + L + L+IF+++N I+ V E L
Sbjct: 60 HRNILHLHE----SFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEAL 115
Query: 778 HFSHSTPVIHCDLKPKNV 795
F HS + H D++P+N+
Sbjct: 116 QFLHSHNIGHFDIRPENI 133
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------RQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 69/166 (41%), Gaps = 26/166 (15%)
Query: 683 IGVGSFGSVYKGR-LHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISS-- 739
IG GS G V R H G +VA+K+ + E +M++ +H N V+ S
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 740 CSNEDFKALDCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792
E + ++ L + LN + V AL YLH + VIH D+K
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKS 169
Query: 793 KNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
++ DFG ++ D + + + LV T +MAP ++
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAPEVI 213
>pdb|2Z63|A Chain A, Crystal Structure Of The Tv8 Hybrid Of Human Tlr4 And
Hagfish Vlrb.61
Length = 570
Score = 30.0 bits (66), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 2/127 (1%)
Query: 141 SIF-TMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKV 199
S+F ++ L +LD S + + + LSS+ +++ + +I L L
Sbjct: 415 SVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTF 474
Query: 200 LFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEI 259
L L++ P A + LQ+LN+ +L LT L+KI L N
Sbjct: 475 LDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 534
Query: 260 PHEIGYL 266
P I YL
Sbjct: 535 P-RIDYL 540
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 40/182 (21%)
Query: 677 FSKENLIGVGSFGS-VYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVM---KNIRHRN 732
F ++++G G+ G+ VY+G + D +VA+K C SF A+ EV ++ H N
Sbjct: 26 FCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECF----SF-ADREVQLLRESDEHPN 79
Query: 733 HVKRISSCSNEDFKAL----------DCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHS 782
++ + + F+ + + + + + + + ++ S L +LH S
Sbjct: 80 VIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---S 136
Query: 783 TPVIHCDLKPKNVF---------------DFGIGRLLTGDRSMIQTETLV--TIGYMAPG 825
++H DLKP N+ DFG+ + L R + V T G++AP
Sbjct: 137 LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPE 196
Query: 826 LL 827
+L
Sbjct: 197 ML 198
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 30.0 bits (66), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 736 RISSCSNEDFKALDCL------------HSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
+ C + L L + + + D + + VA +++L S
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 211
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 212 KFVHRDLAARNCMLDEKFTVKVADFGLAR 240
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 10/42 (23%)
Query: 779 FSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSM 810
F H + +IH DLKP N + DFG+ R + D+ +
Sbjct: 146 FIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTINSDKDI 187
>pdb|3J0A|A Chain A, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
pdb|3J0A|B Chain B, Homology Model Of Human Toll-Like Receptor 5 Fitted Into
An Electron Microscopy Single Particle Reconstruction
Length = 844
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 11/115 (9%)
Query: 418 GSIPVTFGRLQKLQGLY------LPFNKLAGSIPDQ--LCHLARLNTLGLAGNKF-SGSI 468
GS + F QGL+ L F L+ ++ +L L L L+ N+ S +
Sbjct: 81 GSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYL 140
Query: 469 PSCLGNLTSLRSPDLGSNRLTSVLPSTFWNL--KDILFFDLSSNSLDGPLSLDIG 521
G L SL+S D SN++ V L K + FF L++NSL +S+D G
Sbjct: 141 HPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWG 195
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 30.0 bits (66), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 681 NLIGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIR----HRNH-- 733
++G GSFG V R+ + G A+KV ++ + L+ + EC M R RNH
Sbjct: 29 RVLGKGSFGKVMLARVKETGDLYAVKVLKKD--VILQDDDVEC-TMTEKRILSLARNHPF 85
Query: 734 VKRISSC---SNEDFKALDCLHSTNCSLNI-----FDKLNIMIDVASALEYLHFSHSTPV 785
+ ++ C + F ++ ++ + +I FD+ A + L F H +
Sbjct: 86 LTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLHDKGI 145
Query: 786 IHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLV-TIGYMAPGLL 827
I+ DLK NV DFG+ + G + + T T T Y+AP +L
Sbjct: 146 IYRDLKLDNVLLDHEGHCKLADFGMCK--EGICNGVTTATFCGTPDYIAPEIL 196
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 30.0 bits (66), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 16/70 (22%)
Query: 774 LEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGRLLTGDRSMIQ--TETLV 817
L+ +H+ H+ V+H DLKP N+ D G RL + +V
Sbjct: 138 LDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVV 197
Query: 818 TIGYMAPGLL 827
T Y AP LL
Sbjct: 198 TFWYRAPELL 207
>pdb|2OMV|A Chain A, Crystal Structure Of Inla S192n Y369s/hec1 Complex
pdb|2OMW|A Chain A, Crystal Structure Of Inla S192n Y369s/mec1 Complex
Length = 461
Score = 30.0 bits (66), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 80/188 (42%), Gaps = 32/188 (17%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSG--------SIPSC---- 471
L L GL L FN I D L +L LN L L+ N S S+
Sbjct: 103 LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGN 160
Query: 472 -------LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLR 524
L NLT+L D+ SN+++ + S L ++ ++N + DI L
Sbjct: 161 QVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQIS-----DITPLG 213
Query: 525 VVIGIN-LSRN-NFSGDIPSTIGDLKDLQNISLACNGLEGLIPES-FGYLTELNLSFNKL 581
++ ++ LS N N DI T+ L +L ++ LA N + L P S LTEL L N++
Sbjct: 214 ILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQI 272
Query: 582 EGEIPRGG 589
P G
Sbjct: 273 SNISPLAG 280
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 149/372 (40%), Gaps = 91/372 (24%)
Query: 145 MHKLKFLDFSDNQLSGSLSSVT--FNLSSVLDIRLDSDKLSGELPV-NICNYLHYLKVLF 201
++ L ++FS+NQL+ +T NL+ ++DI +++++++ P+ N+ N L L
Sbjct: 62 LNNLTQINFSNNQLT----DITPLKNLTKLVDILMNNNQIADITPLANLTN----LTGLT 113
Query: 202 LAKNMFHGQIPL--------------------ALSKCKRLQLLNLGFKKLSGAIPKEISN 241
L N PL ALS LQ LN G + K ++N
Sbjct: 114 LFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGNQVTD---LKPLAN 170
Query: 242 LTILRKISLRNNKLRGEIPHEIGYLPXXXXXXXXXXXXXXXXPAAIFNMSTVKKIYLLDN 301
LT L ++ + +NK+ + L P I ++ + ++ L N
Sbjct: 171 LTTLERLDISSNKVSD--ISVLAKLTNLESLIATNNQISDITPLGI--LTNLDELSLNGN 226
Query: 302 SLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIG 361
L +G SL N+ L+L N+ S P ++ +KL L +G N S I
Sbjct: 227 QL---KDIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI------ 275
Query: 362 LTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQXXXXXXXXXXXXXEGNKLTGSIP 421
+PL G+ T++ NL ++ N+L P
Sbjct: 276 ---SPLAGL--TALTNLELN-------------------------------ENQLEDISP 299
Query: 422 VTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSP 481
++ L+ L L L FN ++ P + L +L L + NK S S L NLT++
Sbjct: 300 IS--NLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFSNNKVSDV--SSLANLTNINWL 353
Query: 482 DLGSNRLTSVLP 493
G N+++ + P
Sbjct: 354 SAGHNQISDLTP 365
>pdb|2OMY|A Chain A, Crystal Structure Of Inla S192n/hec1 Complex
Length = 461
Score = 29.6 bits (65), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 80/188 (42%), Gaps = 32/188 (17%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSG--------SIPSC---- 471
L L GL L FN I D L +L LN L L+ N S S+
Sbjct: 103 LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFGN 160
Query: 472 -------LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLR 524
L NLT+L D+ SN+++ + S L ++ ++N + DI L
Sbjct: 161 QVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQIS-----DITPLG 213
Query: 525 VVIGIN-LSRN-NFSGDIPSTIGDLKDLQNISLACNGLEGLIPES-FGYLTELNLSFNKL 581
++ ++ LS N N DI T+ L +L ++ LA N + L P S LTEL L N++
Sbjct: 214 ILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQI 272
Query: 582 EGEIPRGG 589
P G
Sbjct: 273 SNISPLAG 280
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 118 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 167
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 29.6 bits (65), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 70/185 (37%), Gaps = 47/185 (25%)
Query: 675 EKFSKENLIGVGSFGSVY-KGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNH 733
++F + +G GSFG V + G A+K+ + + LK I H +
Sbjct: 27 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ----------IEHTLN 76
Query: 734 VKRISSCSNEDF-KALDCLHSTNCSLNI-------------------FDKLNIMIDVASA 773
KRI N F L+ N +L + F + + A
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 774 LEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLV-TIGYM 822
+ + HS +I+ DLKP+N V DFG + + G +T TL T Y+
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYL 191
Query: 823 APGLL 827
AP ++
Sbjct: 192 APEII 196
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 29.6 bits (65), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 70/185 (37%), Gaps = 47/185 (25%)
Query: 675 EKFSKENLIGVGSFGSVY-KGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNH 733
++F + +G GSFG V + G A+K+ + + LK I H +
Sbjct: 42 DQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQ----------IEHTLN 91
Query: 734 VKRISSCSNEDF-KALDCLHSTNCSLNI-------------------FDKLNIMIDVASA 773
KRI N F L+ N +L + F + + A
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 774 LEYLHFSHSTPVIHCDLKPKN----------VFDFGIGRLLTGDRSMIQTETLV-TIGYM 822
+ + HS +I+ DLKP+N V DFG + + G +T TL T Y+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKG-----RTWTLCGTPEYL 206
Query: 823 APGLL 827
AP ++
Sbjct: 207 APEII 211
>pdb|3RG1|A Chain A, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|E Chain E, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|I Chain I, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|M Chain M, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|B Chain B, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|F Chain F, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|J Chain J, Crystal Structure Of The Rp105MD-1 Complex
pdb|3RG1|N Chain N, Crystal Structure Of The Rp105MD-1 Complex
Length = 612
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 61/141 (43%), Gaps = 4/141 (2%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFS-GSIPSC--LGNLTSLRS 480
F L L+ L L L S L L L L L GN F GSI L + SL
Sbjct: 420 FQNLHLLRVLNLSHCLLDTSNQHLLAGLQDLRHLNLQGNSFQDGSISKTNLLQMVGSLEI 479
Query: 481 PDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540
L S L S+ F L+++ DLS NSL G S+D + + +N++ NN
Sbjct: 480 LILSSCNLLSIDQQAFHGLRNVNHLDLSHNSLTGD-SMDALSHLKGLYLNMASNNIRIIP 538
Query: 541 PSTIGDLKDLQNISLACNGLE 561
P + L I+L+ N L+
Sbjct: 539 PHLLPALSQQSIINLSHNPLD 559
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 29.6 bits (65), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA +++L S
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 153
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|1O6S|A Chain A, Internalin (Listeria Monocytogenes) E-Cadherin (Human)
Recognition Complex
pdb|1O6T|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|A Chain A, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
pdb|1O6V|B Chain B, Internalin (Inla,Listeria Monocytogenes) - Functional
Domain, Uncomplexed
Length = 466
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 80/188 (42%), Gaps = 32/188 (17%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSG--------SIPSC---- 471
L L GL L FN I D L +L LN L L+ N S S+
Sbjct: 108 LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN 165
Query: 472 -------LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLR 524
L NLT+L D+ SN+++ + S L ++ ++N + DI L
Sbjct: 166 QVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQIS-----DITPLG 218
Query: 525 VVIGIN-LSRN-NFSGDIPSTIGDLKDLQNISLACNGLEGLIPES-FGYLTELNLSFNKL 581
++ ++ LS N N DI T+ L +L ++ LA N + L P S LTEL L N++
Sbjct: 219 ILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQI 277
Query: 582 EGEIPRGG 589
P G
Sbjct: 278 SNISPLAG 285
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 29.6 bits (65), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 41/94 (43%), Gaps = 8/94 (8%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIP----DQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLR 479
F +L L LYL N+L S+P D+L +L RL+ L N+ LT L+
Sbjct: 129 FDKLTNLTYLYLYHNQLQ-SLPKGVFDKLTNLTRLD---LDNNQLQSLPEGVFDKLTQLK 184
Query: 480 SPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLD 513
L N+L SV F L + L +N D
Sbjct: 185 QLSLNDNQLKSVPDGVFDRLTSLTHIWLLNNPWD 218
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 112 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 161
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 72/168 (42%), Gaps = 26/168 (15%)
Query: 683 IGVGSFGSVYKG--RLHDGIEVAIKVFHQNCAMAL-KSFEAECEVMKNIRHRNHVKRISS 739
+G G++G V R+ + VA+K+ A+ ++ + E + K + H N VK
Sbjct: 14 LGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGH 72
Query: 740 CSNEDFKALDCLHSTNCSLNIFDKL--NIMIDVASALEYLH-------FSHSTPVIHCDL 790
+ + L + + L FD++ +I + A + H + H + H D+
Sbjct: 73 RREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDI 130
Query: 791 KPKNVF----------DFGIGRLLT-GDRSMIQTETLVTIGYMAPGLL 827
KP+N+ DFG+ + +R + + T+ Y+AP LL
Sbjct: 131 KPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 178
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 29.6 bits (65), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 29.6 bits (65), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 74/177 (41%), Gaps = 26/177 (14%)
Query: 674 TEKFSKENLIGVGSFGSVYKG--RLHDGIEVAIKVFHQNCAMAL-KSFEAECEVMKNIRH 730
E + +G G++G V R+ + VA+K+ A+ ++ + E + K + H
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEA-VAVKIVDMKRAVDCPENIKKEIXINKMLNH 64
Query: 731 RNHVKRISSCSNEDFKALDCLHSTNCSLNIFDKL--NIMIDVASALEYLH-------FSH 781
N VK + + L + + L FD++ +I + A + H + H
Sbjct: 65 ENVVKFYGHRREGNIQYLFLEYCSGGEL--FDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 782 STPVIHCDLKPKNVF----------DFGIGRLLT-GDRSMIQTETLVTIGYMAPGLL 827
+ H D+KP+N+ DFG+ + +R + + T+ Y+AP LL
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELL 179
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA +++L S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 152
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 29.6 bits (65), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 29.6 bits (65), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA +++L S
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 153
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 154 KFVHRDLAARNCMLDEKFTVKVADFGLAR 182
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 111 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 160
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 29.6 bits (65), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 112 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 161
>pdb|3FXI|A Chain A, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
pdb|3FXI|B Chain B, Crystal Structure Of The Human Tlr4-Human Md-2-E.Coli Lps
Ra Complex
Length = 605
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 413 GNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKF-SGSIPSC 471
GN + F L LQ L LA + HL L L +A N S +P
Sbjct: 85 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 144
Query: 472 LGNLTSLRSPDLGSNRLTSV 491
NLT+L DL SN++ S+
Sbjct: 145 FSNLTNLEHLDLSSNKIQSI 164
>pdb|2OMZ|A Chain A, Crystal Structure Of Inla Y369a/hec1 Complex
Length = 466
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 80/188 (42%), Gaps = 32/188 (17%)
Query: 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSG--------SIPSC---- 471
L L GL L FN I D L +L LN L L+ N S S+
Sbjct: 107 LANLTNLTGLTL-FNNQITDI-DPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGN 164
Query: 472 -------LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLR 524
L NLT+L D+ SN+++ + S L ++ ++N + DI L
Sbjct: 165 QVTDLKPLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQIS-----DITPLG 217
Query: 525 VVIGIN-LSRN-NFSGDIPSTIGDLKDLQNISLACNGLEGLIPES-FGYLTELNLSFNKL 581
++ ++ LS N N DI T+ L +L ++ LA N + L P S LTEL L N++
Sbjct: 218 ILTNLDELSLNGNQLKDI-GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQI 276
Query: 582 EGEIPRGG 589
P G
Sbjct: 277 SNISPLAG 284
>pdb|4G8A|A Chain A, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
pdb|4G8A|B Chain B, Crystal Structure Of Human Tlr4 Polymorphic Variant D299g
And T399i In Complex With Md-2 And Lps
Length = 635
Score = 29.3 bits (64), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 1/80 (1%)
Query: 413 GNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKF-SGSIPSC 471
GN + F L LQ L LA + HL L L +A N S +P
Sbjct: 109 GNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEY 168
Query: 472 LGNLTSLRSPDLGSNRLTSV 491
NLT+L DL SN++ S+
Sbjct: 169 FSNLTNLEHLDLSSNKIQSI 188
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 736 RISSCSNEDFKALDCL------------HSTNCSLNIFDKLNIMIDVASALEYLHFSHST 783
+ C + L L + + + D + + VA +++L S
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 157
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 158 KFVHRDLAARNCMLDEKFTVKVADFGLAR 186
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 29.3 bits (64), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 59/149 (39%), Gaps = 30/149 (20%)
Query: 681 NLIGVGSFGSVYKGRLHDG----IEVAIKVFHQNCAMA-LKSFEAECEVMKNIRHRNHVK 735
+IG G FG VY G L D I A+K ++ + + F E +MK+ H N +
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 736 RISSCSNEDFKALDCL-HSTNCSLNIF-----------DKLNIMIDVASALEYLHFSHST 783
+ C + L L + + L F D + + VA +++L S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL---ASK 152
Query: 784 PVIHCDLKPKN----------VFDFGIGR 802
+H DL +N V DFG+ R
Sbjct: 153 KFVHRDLAARNCMLDEKFTVKVADFGLAR 181
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 29.3 bits (64), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 9/59 (15%)
Query: 737 ISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L +L +D M ++ AL+Y HS ++H D+KP NV
Sbjct: 113 FEHVNNTDFKQL------YQTLTDYDIRFYMYEILKALDY---CHSMGIMHRDVKPHNV 162
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 29.3 bits (64), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 41/190 (21%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIE------VAIKVFHQNCAMALK-SFEAECEVM 725
+ EK + +G GSFG VY+G D I+ VA+K +++ ++ + F E VM
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 726 KNIRHRNHVKRISSCSN-------EDFKALDCLHSTNCSLN-------------IFDKLN 765
K + V+ + S + A L S SL + + +
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGR-LLTGDRSMIQTE 814
+ ++A + YL ++ +H DL +N + DFG+ R + D +
Sbjct: 135 MAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 815 TLVTIGYMAP 824
L+ + +MAP
Sbjct: 192 GLLPVRWMAP 201
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIE------VAIKVFHQNCAMALK-SFEAECEVM 725
+ EK + +G GSFG VY+G D I+ VA+K +++ ++ + F E VM
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 726 KNIRHRNHVKRI 737
K +HV R+
Sbjct: 75 KGFTC-HHVVRL 85
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 29.3 bits (64), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 9/55 (16%)
Query: 741 SNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNV 795
+N DFK L + L FD M ++ AL+Y HS ++H D+KP NV
Sbjct: 123 NNTDFKQLYQI------LTDFDIRFYMYELLKALDY---CHSKGIMHRDVKPHNV 168
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 29.3 bits (64), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 41/190 (21%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIE------VAIKVFHQNCAMALK-SFEAECEVM 725
+ EK + +G GSFG VY+G D I+ VA+K +++ ++ + F E VM
Sbjct: 12 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 71
Query: 726 KNIRHRNHVKRISSCSN-------EDFKALDCLHSTNCSLN-------------IFDKLN 765
K + V+ + S + A L S SL + + +
Sbjct: 72 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 131
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGR-LLTGDRSMIQTE 814
+ ++A + YL ++ +H DL +N + DFG+ R + D +
Sbjct: 132 MAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 188
Query: 815 TLVTIGYMAP 824
L+ + +MAP
Sbjct: 189 GLLPVRWMAP 198
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 29.3 bits (64), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 77/190 (40%), Gaps = 41/190 (21%)
Query: 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIE------VAIKVFHQNCAMALK-SFEAECEVM 725
+ EK + +G GSFG VY+G D I+ VA+K +++ ++ + F E VM
Sbjct: 15 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVM 74
Query: 726 KNIRHRNHVKRISSCSN-------EDFKALDCLHSTNCSLN-------------IFDKLN 765
K + V+ + S + A L S SL + + +
Sbjct: 75 KGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 134
Query: 766 IMIDVASALEYLHFSHSTPVIHCDLKPKN----------VFDFGIGR-LLTGDRSMIQTE 814
+ ++A + YL ++ +H DL +N + DFG+ R + D +
Sbjct: 135 MAAEIADGMAYL---NAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGK 191
Query: 815 TLVTIGYMAP 824
L+ + +MAP
Sbjct: 192 GLLPVRWMAP 201
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.139 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,376,666
Number of Sequences: 62578
Number of extensions: 830717
Number of successful extensions: 3294
Number of sequences better than 100.0: 859
Number of HSP's better than 100.0 without gapping: 137
Number of HSP's successfully gapped in prelim test: 722
Number of HSP's that attempted gapping in prelim test: 2319
Number of HSP's gapped (non-prelim): 1192
length of query: 827
length of database: 14,973,337
effective HSP length: 107
effective length of query: 720
effective length of database: 8,277,491
effective search space: 5959793520
effective search space used: 5959793520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)