Query 047196
Match_columns 827
No_of_seqs 778 out of 5880
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 15:07:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047196.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047196hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3rgz_A Protein brassinosteroid 100.0 7.7E-81 2.6E-85 754.2 44.9 563 48-620 5-752 (768)
2 3rgz_A Protein brassinosteroid 100.0 4.8E-63 1.6E-67 598.5 35.4 479 99-584 179-743 (768)
3 4eco_A Uncharacterized protein 100.0 3.9E-60 1.3E-64 560.3 26.6 494 51-583 26-601 (636)
4 4ecn_A Leucine-rich repeat pro 100.0 9.6E-58 3.3E-62 548.6 27.9 475 48-582 262-840 (876)
5 1ziw_A TOLL-like receptor 3; i 100.0 2.2E-55 7.6E-60 526.0 40.4 510 98-609 25-626 (680)
6 3t6q_A CD180 antigen; protein- 100.0 4.1E-55 1.4E-59 516.7 37.5 490 98-608 33-563 (606)
7 3t6q_A CD180 antigen; protein- 100.0 4.1E-54 1.4E-58 508.1 34.6 483 103-609 17-539 (606)
8 1ziw_A TOLL-like receptor 3; i 100.0 7.9E-53 2.7E-57 504.0 43.3 489 98-587 73-627 (680)
9 3vq2_A TLR4, TOLL-like recepto 100.0 1.2E-53 4.2E-58 504.0 34.3 483 98-609 32-562 (606)
10 3j0a_A TOLL-like receptor 5; m 100.0 9.1E-54 3.1E-58 522.7 31.2 509 86-608 14-563 (844)
11 3vq2_A TLR4, TOLL-like recepto 100.0 2.9E-51 1E-55 483.7 34.9 461 98-587 56-563 (606)
12 2z81_A CD282 antigen, TOLL-lik 100.0 2.2E-50 7.5E-55 470.5 29.7 478 85-587 3-515 (549)
13 3j0a_A TOLL-like receptor 5; m 100.0 1E-49 3.5E-54 486.9 32.7 461 98-586 48-564 (844)
14 2z63_A TOLL-like receptor 4, v 100.0 1.7E-49 5.7E-54 465.2 32.0 464 98-588 28-537 (570)
15 2z63_A TOLL-like receptor 4, v 100.0 4.8E-48 1.6E-52 452.8 34.4 478 103-610 12-536 (570)
16 4ecn_A Leucine-rich repeat pro 100.0 8.9E-49 3E-53 470.9 26.1 436 122-604 323-839 (876)
17 4eco_A Uncharacterized protein 100.0 2.5E-49 8.5E-54 467.9 20.7 492 52-606 24-601 (636)
18 2z81_A CD282 antigen, TOLL-lik 100.0 8E-48 2.7E-52 448.8 30.4 490 92-609 3-514 (549)
19 2z7x_B TOLL-like receptor 1, v 100.0 2E-48 6.9E-53 450.7 24.0 455 101-586 3-485 (520)
20 2z7x_B TOLL-like receptor 1, v 100.0 9.6E-47 3.3E-51 436.6 25.4 452 125-608 3-484 (520)
21 4g8a_A TOLL-like receptor 4; l 100.0 2.5E-44 8.5E-49 426.5 35.0 476 99-582 53-580 (635)
22 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 3E-44 1E-48 419.5 26.4 455 101-587 34-515 (562)
23 4g8a_A TOLL-like receptor 4; l 100.0 7E-43 2.4E-47 414.1 34.5 445 98-562 76-581 (635)
24 3a79_B TLR6, VLRB.59, TOLL-lik 100.0 9.3E-44 3.2E-48 415.3 24.9 454 123-608 32-513 (562)
25 1ogq_A PGIP-2, polygalacturona 100.0 8.3E-44 2.8E-48 383.5 19.9 293 51-351 2-302 (313)
26 1jl5_A Outer protein YOPM; leu 100.0 3.8E-43 1.3E-47 397.3 23.9 406 98-586 11-433 (454)
27 1jl5_A Outer protein YOPM; leu 100.0 1.4E-42 4.7E-47 392.7 24.3 396 116-588 5-417 (454)
28 3v47_A TOLL-like receptor 5B a 100.0 4.4E-42 1.5E-46 390.7 28.0 391 82-541 4-412 (455)
29 3v47_A TOLL-like receptor 5B a 100.0 5.3E-42 1.8E-46 390.0 28.6 383 85-517 16-412 (455)
30 3bz5_A Internalin-J, INLJ; leu 100.0 6.5E-40 2.2E-44 371.1 30.1 353 99-545 43-395 (457)
31 3bz5_A Internalin-J, INLJ; leu 100.0 6E-40 2E-44 371.4 27.4 362 111-587 31-392 (457)
32 1o6v_A Internalin A; bacterial 100.0 2.8E-37 9.4E-42 351.9 32.7 347 119-562 43-389 (466)
33 1o6v_A Internalin A; bacterial 100.0 4.7E-37 1.6E-41 350.0 31.8 344 98-538 46-389 (466)
34 3oja_B Anopheles plasmodium-re 100.0 6.4E-36 2.2E-40 351.1 27.7 173 74-280 8-184 (597)
35 2id5_A Lingo-1, leucine rich r 100.0 1.4E-35 4.6E-40 339.2 29.1 313 108-465 21-333 (477)
36 2id5_A Lingo-1, leucine rich r 100.0 8.2E-36 2.8E-40 341.1 26.1 300 196-512 33-332 (477)
37 3o6n_A APL1; leucine-rich repe 100.0 4E-35 1.4E-39 326.3 27.7 349 75-513 3-352 (390)
38 4fcg_A Uncharacterized protein 100.0 8E-36 2.7E-40 323.2 15.0 282 50-353 22-314 (328)
39 1ogq_A PGIP-2, polygalacturona 100.0 1.6E-34 5.5E-39 311.0 17.9 227 381-609 77-308 (313)
40 3o6n_A APL1; leucine-rich repe 100.0 2.2E-33 7.6E-38 312.1 25.5 309 196-563 46-354 (390)
41 3oja_B Anopheles plasmodium-re 100.0 8.7E-33 3E-37 324.5 26.0 287 98-465 51-337 (597)
42 4fmz_A Internalin; leucine ric 100.0 5.4E-32 1.8E-36 296.0 28.1 302 99-489 45-346 (347)
43 4fmz_A Internalin; leucine ric 100.0 7.6E-32 2.6E-36 294.8 26.8 301 196-560 45-345 (347)
44 1z7x_W Ribonuclease inhibitor; 100.0 5.6E-35 1.9E-39 332.6 -1.1 390 122-543 3-446 (461)
45 2ft3_A Biglycan; proteoglycan, 100.0 1.8E-31 6.2E-36 289.9 24.3 290 196-535 34-331 (332)
46 1z7x_W Ribonuclease inhibitor; 100.0 4.1E-35 1.4E-39 333.7 -4.8 383 170-583 3-441 (461)
47 2ft3_A Biglycan; proteoglycan, 100.0 3E-31 1E-35 288.2 24.7 288 220-559 34-331 (332)
48 1xku_A Decorin; proteoglycan, 100.0 7E-31 2.4E-35 285.0 27.5 267 220-510 53-329 (330)
49 1xku_A Decorin; proteoglycan, 100.0 1.2E-30 4.1E-35 283.2 26.1 298 219-559 31-330 (330)
50 3ogk_B Coronatine-insensitive 100.0 1.6E-33 5.4E-38 331.2 -8.1 256 85-348 41-326 (592)
51 3ogk_B Coronatine-insensitive 100.0 2.6E-32 9E-37 320.8 -4.3 412 134-563 61-528 (592)
52 2z80_A TOLL-like receptor 2, v 100.0 1.8E-29 6.3E-34 276.5 17.7 285 82-398 26-319 (353)
53 4fcg_A Uncharacterized protein 100.0 2.4E-29 8.3E-34 272.2 16.5 283 70-395 27-316 (328)
54 2z66_A Variable lymphocyte rec 100.0 7.2E-29 2.5E-33 266.1 18.1 252 85-354 6-262 (306)
55 2z66_A Variable lymphocyte rec 100.0 4.1E-28 1.4E-32 260.3 19.6 281 222-546 10-296 (306)
56 1wwl_A Monocyte differentiatio 100.0 3.7E-30 1.3E-34 276.9 3.4 267 75-353 21-309 (312)
57 3g06_A SSPH2 (leucine-rich rep 100.0 2.3E-28 7.9E-33 284.6 18.0 107 381-500 202-308 (622)
58 2z80_A TOLL-like receptor 2, v 100.0 2.6E-28 9E-33 267.3 17.3 258 196-491 53-316 (353)
59 1wwl_A Monocyte differentiatio 100.0 2.2E-29 7.5E-34 270.8 7.8 252 118-442 39-310 (312)
60 3zyi_A Leucine-rich repeat-con 100.0 4.9E-27 1.7E-31 266.2 24.8 234 114-353 69-303 (452)
61 4aoj_A High affinity nerve gro 99.9 3.1E-28 1.1E-32 261.6 12.6 150 675-827 41-232 (329)
62 4asz_A BDNF/NT-3 growth factor 99.9 3.2E-28 1.1E-32 257.9 11.6 150 675-827 13-202 (299)
63 3o53_A Protein LRIM1, AGAP0063 99.9 9.7E-29 3.3E-33 266.4 7.4 169 381-556 100-270 (317)
64 3zyi_A Leucine-rich repeat-con 99.9 2E-26 7E-31 261.1 24.5 228 195-464 75-302 (452)
65 3o53_A Protein LRIM1, AGAP0063 99.9 2.5E-28 8.4E-33 263.3 7.7 267 198-519 13-282 (317)
66 3zyj_A Leucine-rich repeat-con 99.9 3E-26 1E-30 258.7 24.1 242 105-353 50-292 (440)
67 3omv_A RAF proto-oncogene seri 99.9 7.5E-28 2.6E-32 255.1 10.1 148 675-827 36-206 (307)
68 1ozn_A Reticulon 4 receptor; N 99.9 7.6E-27 2.6E-31 247.7 17.4 207 381-587 57-266 (285)
69 1ozn_A Reticulon 4 receptor; N 99.9 5.3E-27 1.8E-31 248.8 15.9 254 101-359 14-267 (285)
70 3zyj_A Leucine-rich repeat-con 99.9 6.7E-26 2.3E-30 255.9 25.4 107 381-489 186-292 (440)
71 3g06_A SSPH2 (leucine-rich rep 99.9 5.4E-26 1.8E-30 264.7 25.1 265 196-545 41-305 (622)
72 4gt4_A Tyrosine-protein kinase 99.9 1.8E-27 6.3E-32 253.2 11.6 149 676-827 27-219 (308)
73 4fih_A Serine/threonine-protei 99.9 3E-27 1E-31 253.6 12.3 149 675-827 74-242 (346)
74 2o6q_A Variable lymphocyte rec 99.9 3.6E-26 1.2E-30 240.4 20.1 218 83-305 2-219 (270)
75 3fpq_A Serine/threonine-protei 99.9 1.4E-26 4.8E-31 243.5 15.9 146 678-827 29-202 (290)
76 3hmm_A TGF-beta receptor type- 99.9 6.4E-27 2.2E-31 249.5 12.9 151 675-827 3-184 (303)
77 4aw0_A HPDK1, 3-phosphoinositi 99.9 8.4E-27 2.9E-31 246.4 12.6 150 675-827 32-206 (311)
78 4fie_A Serine/threonine-protei 99.9 1.5E-26 5.1E-31 254.4 13.3 149 675-827 151-319 (423)
79 2p1m_B Transport inhibitor res 99.9 2.5E-29 8.5E-34 295.5 -9.5 426 85-560 34-518 (594)
80 4b9d_A Serine/threonine-protei 99.9 5.7E-27 1.9E-31 251.9 9.2 149 675-827 24-197 (350)
81 3hyh_A Carbon catabolite-derep 99.9 1.5E-26 5E-31 241.2 11.6 148 675-827 13-183 (275)
82 3oja_A Leucine-rich immune mol 99.9 7E-27 2.4E-31 266.7 9.5 30 715-744 323-352 (487)
83 3oja_A Leucine-rich immune mol 99.9 1.7E-26 5.9E-31 263.4 12.4 124 381-508 145-270 (487)
84 4g31_A Eukaryotic translation 99.9 2.1E-26 7.3E-31 244.3 12.0 150 675-827 5-202 (299)
85 4g3f_A NF-kappa-beta-inducing 99.9 7.2E-26 2.5E-30 242.2 10.6 145 675-827 58-228 (336)
86 2p1m_B Transport inhibitor res 99.9 1E-27 3.5E-32 281.7 -6.9 418 125-582 46-519 (594)
87 3ubd_A Ribosomal protein S6 ki 99.9 4.1E-26 1.4E-30 241.1 5.3 149 675-827 24-198 (304)
88 4ase_A Vascular endothelial gr 99.9 4.2E-25 1.5E-29 239.2 12.9 152 673-827 62-259 (353)
89 2z62_A TOLL-like receptor 4, v 99.9 1.9E-24 6.5E-29 228.0 17.2 206 381-587 29-242 (276)
90 2z62_A TOLL-like receptor 4, v 99.9 5.6E-24 1.9E-28 224.4 19.3 184 381-565 53-241 (276)
91 4b99_A Mitogen-activated prote 99.9 1.1E-24 3.7E-29 240.2 13.6 150 675-827 54-234 (398)
92 3rfs_A Internalin B, repeat mo 99.9 3.6E-24 1.2E-28 225.3 14.9 200 381-588 42-241 (272)
93 3m19_A Variable lymphocyte rec 99.9 8E-24 2.7E-28 219.9 16.5 192 84-282 3-194 (251)
94 3rfs_A Internalin B, repeat mo 99.9 4.5E-24 1.5E-28 224.6 14.5 210 118-340 37-246 (272)
95 2o6q_A Variable lymphocyte rec 99.9 3.9E-23 1.3E-27 217.2 20.7 181 381-561 38-218 (270)
96 4glp_A Monocyte differentiatio 99.9 1E-23 3.5E-28 226.4 13.8 200 381-583 92-308 (310)
97 1p9a_G Platelet glycoprotein I 99.9 7.1E-23 2.4E-27 217.2 19.3 203 336-561 6-208 (290)
98 3goz_A Leucine-rich repeat-con 99.9 6E-25 2.1E-29 241.4 2.0 254 102-355 2-299 (362)
99 2xwt_C Thyrotropin receptor; s 99.9 2.3E-23 8E-28 214.7 13.6 196 381-579 32-236 (239)
100 3goz_A Leucine-rich repeat-con 99.9 4.9E-25 1.7E-29 242.1 0.5 233 200-464 3-265 (362)
101 4f9c_A Cell division cycle 7-r 99.9 1.2E-23 4.2E-28 229.2 11.5 150 673-827 19-218 (361)
102 2ast_B S-phase kinase-associat 99.9 4.4E-25 1.5E-29 239.9 0.0 269 84-402 35-315 (336)
103 4glp_A Monocyte differentiatio 99.9 5.2E-23 1.8E-27 220.8 16.0 224 122-353 64-307 (310)
104 1p9a_G Platelet glycoprotein I 99.9 2E-22 6.8E-27 213.8 19.4 152 99-281 11-162 (290)
105 3uto_A Twitchin; kinase, muscl 99.9 2.8E-23 9.4E-28 240.3 12.3 148 675-827 157-328 (573)
106 3v5w_A G-protein coupled recep 99.9 8.4E-23 2.9E-27 234.6 14.8 147 675-827 189-362 (689)
107 3m19_A Variable lymphocyte rec 99.9 5.5E-22 1.9E-26 206.0 17.6 181 381-564 15-195 (251)
108 2xwt_C Thyrotropin receptor; s 99.9 3E-22 1E-26 206.3 15.5 196 123-326 32-236 (239)
109 2ca6_A RAN GTPase-activating p 99.9 1.3E-23 4.5E-28 232.9 4.3 138 219-356 159-319 (386)
110 2ast_B S-phase kinase-associat 99.9 5.7E-23 1.9E-27 223.2 9.1 255 123-426 48-315 (336)
111 2ca6_A RAN GTPase-activating p 99.9 1.5E-23 5E-28 232.5 3.4 110 243-353 159-287 (386)
112 3uim_A Brassinosteroid insensi 99.9 1.6E-22 5.4E-27 218.7 11.1 167 661-827 16-207 (326)
113 3cvr_A Invasion plasmid antige 99.9 4.4E-22 1.5E-26 228.9 14.6 200 77-308 35-247 (571)
114 1h6u_A Internalin H; cell adhe 99.9 1.3E-21 4.5E-26 209.5 14.3 168 381-562 64-231 (308)
115 4aw2_A Serine/threonine-protei 99.9 7.9E-22 2.7E-26 220.8 10.3 157 668-827 67-248 (437)
116 2c30_A Serine/threonine-protei 99.8 3.2E-21 1.1E-25 208.0 14.1 161 663-827 23-213 (321)
117 1h6u_A Internalin H; cell adhe 99.8 6.9E-21 2.3E-25 203.9 15.8 189 381-583 42-231 (308)
118 2qkw_B Protein kinase; three-h 99.8 9.2E-22 3.1E-26 212.2 8.8 159 665-826 29-212 (321)
119 2o6s_A Variable lymphocyte rec 99.8 6.6E-21 2.3E-25 191.8 13.6 161 381-548 29-189 (208)
120 2o6s_A Variable lymphocyte rec 99.8 3.6E-21 1.2E-25 193.7 11.5 152 383-537 10-161 (208)
121 3s95_A LIMK-1, LIM domain kina 99.8 6.6E-21 2.2E-25 204.4 14.1 150 675-827 10-194 (310)
122 3fe3_A MAP/microtubule affinit 99.8 7.6E-21 2.6E-25 205.3 14.4 149 674-827 14-185 (328)
123 4ay9_X Follicle-stimulating ho 99.8 2.5E-20 8.5E-25 203.5 17.8 204 86-329 9-215 (350)
124 2vd5_A DMPK protein; serine/th 99.8 2.1E-21 7.1E-26 215.8 9.1 156 669-827 55-235 (412)
125 3cvr_A Invasion plasmid antige 99.8 6.3E-21 2.2E-25 219.3 13.3 166 381-571 81-253 (571)
126 3niz_A Rhodanese family protei 99.8 6.8E-21 2.3E-25 204.4 12.7 150 674-827 20-191 (311)
127 3zgw_A Maternal embryonic leuc 99.8 5.2E-21 1.8E-25 207.9 11.9 151 674-827 9-181 (347)
128 3v8s_A RHO-associated protein 99.8 4.5E-21 1.5E-25 213.0 11.4 156 669-827 63-241 (410)
129 3fxz_A Serine/threonine-protei 99.8 1.2E-20 4.1E-25 201.1 13.6 150 674-827 19-188 (297)
130 2nru_A Interleukin-1 receptor- 99.8 2.6E-20 8.9E-25 199.4 16.0 162 661-826 11-206 (307)
131 1o6l_A RAC-beta serine/threoni 99.8 1.6E-20 5.6E-25 203.4 14.4 149 675-827 5-177 (337)
132 3p1a_A MYT1 kinase, membrane-a 99.8 5.3E-21 1.8E-25 205.3 10.1 148 675-827 57-228 (311)
133 4ay9_X Follicle-stimulating ho 99.8 5.5E-20 1.9E-24 200.7 18.1 106 222-354 12-118 (350)
134 4b8c_D Glucose-repressible alc 99.8 5.3E-22 1.8E-26 236.6 1.6 258 52-353 129-404 (727)
135 2bdw_A Hypothetical protein K1 99.8 2E-20 6.7E-25 205.1 13.9 150 673-827 27-202 (362)
136 3o0g_A Cell division protein k 99.8 2.1E-20 7.2E-25 198.6 13.7 149 675-827 2-173 (292)
137 2psq_A Fibroblast growth facto 99.8 1.9E-20 6.4E-25 206.0 13.5 150 675-827 81-277 (370)
138 3c0i_A Peripheral plasma membr 99.8 1.8E-20 6.2E-25 204.7 12.9 149 675-827 24-205 (351)
139 3qd2_B Eukaryotic translation 99.8 2.3E-20 8E-25 201.9 13.2 151 674-827 5-248 (332)
140 4fr4_A YANK1, serine/threonine 99.8 2.8E-20 9.4E-25 204.8 13.9 148 675-827 15-186 (384)
141 3soc_A Activin receptor type-2 99.8 2.2E-20 7.6E-25 201.5 12.9 152 674-827 23-205 (322)
142 2zmd_A Dual specificity protei 99.8 3E-20 1E-24 205.9 14.1 150 675-827 56-228 (390)
143 2zv2_A Calcium/calmodulin-depe 99.8 4E-20 1.4E-24 197.1 14.3 149 675-827 13-209 (298)
144 3kul_A Ephrin type-A receptor 99.8 1.9E-20 6.5E-25 202.2 11.9 150 675-827 49-226 (325)
145 3ttj_A Mitogen-activated prote 99.8 1.5E-20 5.1E-25 212.8 11.5 149 674-827 61-235 (464)
146 1ob3_A PFPK5, cell division co 99.8 9.5E-21 3.3E-25 200.9 9.3 149 675-827 2-172 (288)
147 3rp9_A Mitogen-activated prote 99.8 1.9E-20 6.5E-25 212.3 12.4 150 674-826 52-254 (458)
148 3dbq_A Dual specificity protei 99.8 2.5E-20 8.6E-25 202.9 12.8 150 675-827 9-181 (343)
149 4eqm_A Protein kinase; transfe 99.8 2.7E-20 9.4E-25 198.0 12.7 149 675-826 11-183 (294)
150 3txo_A PKC-L, NPKC-ETA, protei 99.8 2.5E-20 8.4E-25 203.3 12.5 150 674-827 22-196 (353)
151 4dc2_A Protein kinase C IOTA t 99.8 2.7E-20 9.2E-25 205.6 12.8 150 674-827 51-225 (396)
152 1kob_A Twitchin; kinase, intra 99.8 2.7E-20 9.1E-25 205.5 12.8 149 674-827 50-222 (387)
153 2x4f_A Myosin light chain kina 99.8 1.5E-20 5.3E-25 206.8 10.6 146 677-827 91-260 (373)
154 4hcu_A Tyrosine-protein kinase 99.8 1.6E-20 5.4E-25 197.0 10.1 148 675-826 10-178 (269)
155 2yab_A Death-associated protei 99.8 3.3E-20 1.1E-24 202.9 13.0 149 674-827 11-190 (361)
156 3sxs_A Cytoplasmic tyrosine-pr 99.8 4.6E-20 1.6E-24 193.3 13.5 150 674-827 7-177 (268)
157 3tki_A Serine/threonine-protei 99.8 3.3E-20 1.1E-24 200.2 12.5 150 675-827 7-179 (323)
158 3soa_A Calcium/calmodulin-depe 99.8 5E-20 1.7E-24 206.9 14.3 151 673-827 9-185 (444)
159 1tki_A Titin; serine kinase, m 99.8 4E-20 1.4E-24 199.2 13.0 148 674-827 4-175 (321)
160 2qol_A Ephrin receptor; recept 99.8 1.4E-20 4.7E-25 207.2 9.3 150 675-827 45-222 (373)
161 3a8x_A Protein kinase C IOTA t 99.8 6.6E-20 2.2E-24 199.5 14.5 149 675-827 9-182 (345)
162 3h4j_B AMPK kdaid, SNF1-like p 99.8 3.6E-20 1.2E-24 200.5 12.2 148 675-827 9-179 (336)
163 1u5q_A Serine/threonine protei 99.8 3.2E-20 1.1E-24 202.3 11.8 144 675-826 54-221 (348)
164 3e6j_A Variable lymphocyte rec 99.8 1.3E-19 4.3E-24 185.2 15.5 162 81-283 14-175 (229)
165 3p86_A Serine/threonine-protei 99.8 6.8E-20 2.3E-24 196.3 13.7 151 674-827 36-211 (309)
166 1fot_A TPK1 delta, CAMP-depend 99.8 7.1E-20 2.4E-24 196.8 13.3 146 675-827 6-175 (318)
167 3ugc_A Tyrosine-protein kinase 99.8 1.9E-20 6.6E-25 199.2 8.7 150 675-827 10-189 (295)
168 2y0a_A Death-associated protei 99.8 8.1E-20 2.8E-24 197.4 13.7 149 674-827 10-189 (326)
169 1xjd_A Protein kinase C, theta 99.8 5.8E-20 2E-24 199.6 12.4 151 673-827 15-190 (345)
170 3n9x_A Phosphotransferase; mal 99.8 7.4E-20 2.5E-24 205.6 13.6 150 674-826 25-222 (432)
171 3a62_A Ribosomal protein S6 ki 99.8 5.5E-20 1.9E-24 198.8 12.1 150 674-827 16-193 (327)
172 3poz_A Epidermal growth factor 99.8 2.2E-20 7.5E-25 202.0 8.7 150 675-827 15-191 (327)
173 3l9p_A Anaplastic lymphoma kin 99.8 2.9E-20 9.8E-25 204.3 9.7 150 675-827 71-258 (367)
174 3oz6_A Mitogen-activated prote 99.8 5.9E-20 2E-24 203.6 12.3 152 673-827 7-202 (388)
175 3q4u_A Activin receptor type-1 99.8 1.3E-19 4.3E-24 193.3 14.4 150 674-827 7-189 (301)
176 3vhe_A Vascular endothelial gr 99.8 3.8E-20 1.3E-24 202.8 10.5 157 668-827 15-267 (359)
177 1luf_A Muscle-specific tyrosin 99.8 6.8E-20 2.3E-24 199.4 12.2 151 673-826 45-247 (343)
178 2eva_A TAK1 kinase - TAB1 chim 99.8 7.9E-20 2.7E-24 195.7 12.4 146 675-827 8-175 (307)
179 4euu_A Serine/threonine-protei 99.8 1.2E-19 4.2E-24 195.3 14.0 147 675-826 9-186 (319)
180 3cbl_A C-FES, proto-oncogene t 99.8 2.3E-20 7.8E-25 206.0 8.3 151 674-827 113-287 (377)
181 2pmi_A Negative RE, cyclin-dep 99.8 6.2E-20 2.1E-24 197.5 11.5 150 674-827 4-180 (317)
182 3hko_A Calcium/calmodulin-depe 99.8 6.9E-20 2.4E-24 199.5 12.0 156 669-827 20-246 (345)
183 3f3z_A Calcium/calmodulin-depe 99.8 1.1E-19 3.8E-24 191.4 12.6 148 674-826 8-179 (277)
184 2acx_A G protein-coupled recep 99.8 9.9E-20 3.4E-24 208.8 13.0 149 674-827 183-357 (576)
185 3gen_A Tyrosine-protein kinase 99.8 3.9E-20 1.3E-24 195.6 8.8 149 674-826 23-192 (283)
186 1mp8_A Focal adhesion kinase 1 99.8 7.6E-20 2.6E-24 193.2 11.0 151 674-827 14-189 (281)
187 1qcf_A Haematopoetic cell kina 99.8 5.6E-20 1.9E-24 208.0 10.6 151 673-827 186-357 (454)
188 1rdq_E PKA C-alpha, CAMP-depen 99.8 1.2E-19 4.1E-24 197.8 12.8 146 675-827 41-210 (350)
189 1opk_A P150, C-ABL, proto-onco 99.8 7E-20 2.4E-24 209.3 11.0 150 674-827 219-391 (495)
190 3i6u_A CDS1, serine/threonine- 99.8 8E-20 2.7E-24 204.4 11.2 150 673-827 133-313 (419)
191 3tt0_A Basic fibroblast growth 99.8 1.7E-19 5.9E-24 199.4 13.6 150 675-827 69-265 (382)
192 3dls_A PAS domain-containing s 99.8 3.3E-20 1.1E-24 201.2 7.6 150 673-827 22-201 (335)
193 2i0e_A Protein kinase C-beta I 99.8 9.9E-20 3.4E-24 198.4 11.4 150 674-827 19-193 (353)
194 2y94_A 5'-AMP-activated protei 99.8 1.8E-19 6.3E-24 203.7 13.6 148 675-827 16-187 (476)
195 1dce_A Protein (RAB geranylger 99.8 1E-21 3.5E-26 227.1 -5.0 220 87-331 286-548 (567)
196 2w4o_A Calcium/calmodulin-depe 99.8 9E-20 3.1E-24 198.9 10.6 147 674-827 52-222 (349)
197 2vuw_A Serine/threonine-protei 99.8 9.4E-20 3.2E-24 197.8 10.6 145 674-827 19-249 (336)
198 3uc3_A Serine/threonine-protei 99.8 9.8E-20 3.4E-24 199.5 10.7 148 674-827 19-189 (361)
199 4ejn_A RAC-alpha serine/threon 99.8 4E-20 1.4E-24 208.8 7.8 151 674-827 147-321 (446)
200 3mwu_A Calmodulin-domain prote 99.8 1.5E-19 5.2E-24 206.4 12.5 149 674-827 21-195 (486)
201 3is5_A Calcium-dependent prote 99.8 1.6E-19 5.6E-24 191.1 11.8 147 675-826 22-197 (285)
202 1j1b_A Glycogen synthase kinas 99.8 1.3E-19 4.3E-24 202.9 11.6 144 675-827 54-228 (420)
203 3ork_A Serine/threonine protei 99.8 6.7E-20 2.3E-24 196.7 8.9 150 675-827 12-191 (311)
204 3gni_B Strad alpha; kinase fol 99.8 2.5E-19 8.6E-24 198.6 13.7 151 674-827 24-207 (389)
205 3kk8_A Calcium/calmodulin depe 99.8 3.5E-19 1.2E-23 188.2 14.1 148 674-826 5-178 (284)
206 1rjb_A FL cytokine receptor; k 99.8 2.1E-19 7.3E-24 195.6 12.7 151 673-826 43-245 (344)
207 2eue_A Carbon catabolite derep 99.8 1.8E-19 6.1E-24 189.6 11.7 147 675-826 13-182 (275)
208 3e7e_A HBUB1, BUB1A, mitotic c 99.8 1.6E-19 5.4E-24 198.4 11.6 149 673-827 63-257 (365)
209 2ivs_A Proto-oncogene tyrosine 99.8 2.2E-19 7.4E-24 192.8 12.4 150 674-826 22-223 (314)
210 1fmk_A C-SRC, P60-SRC, tyrosin 99.8 1.5E-19 5E-24 204.4 11.6 150 674-827 183-353 (452)
211 3c4z_A Rhodopsin kinase; Ser/T 99.8 2.7E-19 9.2E-24 204.7 13.9 149 675-827 185-361 (543)
212 3lij_A Calcium/calmodulin depe 99.8 1.6E-19 5.6E-24 206.6 12.0 149 674-827 36-210 (494)
213 4agu_A Cyclin-dependent kinase 99.8 3.9E-19 1.3E-23 190.6 14.2 149 675-827 3-174 (311)
214 1ua2_A CAK, cell division prot 99.8 9.9E-20 3.4E-24 198.5 9.5 151 673-827 8-184 (346)
215 3lb7_A RAF proto-oncogene seri 99.8 1.1E-19 3.8E-24 194.6 9.6 148 675-827 36-206 (307)
216 1qpc_A LCK kinase; alpha beta 99.8 9.9E-20 3.4E-24 192.0 9.0 150 673-826 11-181 (279)
217 3kn6_A Ribosomal protein S6 ki 99.8 3.8E-19 1.3E-23 192.0 13.6 141 680-827 16-181 (325)
218 3cc6_A Protein tyrosine kinase 99.8 1.9E-19 6.6E-24 190.0 11.0 150 674-826 11-185 (281)
219 2xrw_A Mitogen-activated prote 99.8 2.4E-19 8.1E-24 197.4 12.1 148 675-827 25-198 (371)
220 3t9t_A Tyrosine-protein kinase 99.8 1.3E-19 4.5E-24 189.6 9.5 148 675-826 8-176 (267)
221 2qr7_A Ribosomal protein S6 ki 99.8 3E-19 1E-23 194.0 12.5 147 673-827 20-192 (342)
222 3pg1_A Mitogen-activated prote 99.8 1.1E-19 3.7E-24 199.5 9.0 156 666-826 13-204 (362)
223 3gbz_A Kinase, CMGC CDK; ssgci 99.8 1.4E-19 4.7E-24 195.9 9.6 152 672-827 31-209 (329)
224 2y7j_A Phosphorylase B kinase 99.8 8.2E-19 2.8E-23 192.6 15.7 152 671-827 90-271 (365)
225 1vzo_A Ribosomal protein S6 ki 99.8 1E-19 3.5E-24 199.0 8.4 151 674-827 53-232 (355)
226 3lxl_A Tyrosine-protein kinase 99.8 2.5E-19 8.6E-24 193.6 11.3 150 675-827 23-202 (327)
227 3q5i_A Protein kinase; CDPK, m 99.8 4E-19 1.4E-23 203.8 13.7 149 674-827 35-220 (504)
228 4f0f_A Serine/threonine-protei 99.8 3E-19 1E-23 189.2 11.7 148 675-827 19-198 (287)
229 2pvf_A Fibroblast growth facto 99.8 5E-19 1.7E-23 191.9 13.7 151 674-827 34-231 (334)
230 3cok_A Serine/threonine-protei 99.8 5.1E-19 1.8E-23 186.4 13.4 150 674-827 10-184 (278)
231 3qup_A Tyrosine-protein kinase 99.8 1.6E-19 5.5E-24 194.7 9.7 151 673-826 21-210 (323)
232 2r5t_A Serine/threonine-protei 99.8 1.9E-19 6.5E-24 197.7 10.3 149 675-827 38-211 (373)
233 1t46_A HOMO sapiens V-KIT hard 99.8 4.6E-19 1.6E-23 190.1 13.1 150 674-826 22-218 (313)
234 3kfa_A Tyrosine-protein kinase 99.8 1.3E-19 4.5E-24 191.9 8.7 150 673-826 11-183 (288)
235 1u59_A Tyrosine-protein kinase 99.8 6.5E-19 2.2E-23 186.6 14.0 150 675-827 9-185 (287)
236 3g33_A Cell division protein k 99.8 2E-19 7E-24 192.6 10.2 150 673-827 7-191 (308)
237 2v70_A SLIT-2, SLIT homolog 2 99.8 7.3E-19 2.5E-23 178.3 13.7 133 431-563 35-168 (220)
238 4fvq_A Tyrosine-protein kinase 99.8 1.1E-19 3.9E-24 192.5 8.0 145 675-827 8-189 (289)
239 2v70_A SLIT-2, SLIT homolog 2 99.8 6.9E-19 2.4E-23 178.5 13.4 157 382-541 13-170 (220)
240 2rku_A Serine/threonine-protei 99.8 8.1E-19 2.8E-23 186.5 14.6 149 674-826 14-186 (294)
241 2h34_A Serine/threonine-protei 99.8 5.8E-19 2E-23 189.2 13.5 151 674-827 33-207 (309)
242 2owb_A Serine/threonine-protei 99.8 7.4E-19 2.5E-23 190.6 14.5 150 674-827 40-213 (335)
243 3mi9_A Cell division protein k 99.8 2.7E-19 9.2E-24 195.4 11.0 151 674-827 16-200 (351)
244 2izr_A Casein kinase I isoform 99.8 1.1E-19 3.9E-24 196.6 7.9 148 675-827 9-189 (330)
245 4e5w_A Tyrosine-protein kinase 99.8 3E-19 1E-23 190.6 11.1 150 675-827 21-201 (302)
246 1p4o_A Insulin-like growth fac 99.8 1.6E-19 5.5E-24 194.6 9.0 156 668-826 18-211 (322)
247 3og7_A AKAP9-BRAF fusion prote 99.8 2.4E-19 8.3E-24 190.1 10.3 148 674-826 23-193 (289)
248 1cm8_A Phosphorylated MAP kina 99.8 2.2E-19 7.4E-24 197.3 10.2 147 674-827 24-197 (367)
249 3qyz_A Mitogen-activated prote 99.8 3.7E-19 1.3E-23 195.4 12.0 150 674-826 26-202 (364)
250 3nyv_A Calmodulin-domain prote 99.8 1.8E-19 6.3E-24 205.7 9.9 149 674-827 25-200 (484)
251 3mtl_A Cell division protein k 99.8 7.8E-20 2.7E-24 197.4 6.4 148 675-826 2-171 (324)
252 4eut_A Serine/threonine-protei 99.8 4.7E-19 1.6E-23 196.8 12.8 147 675-826 9-186 (396)
253 3kex_A Receptor tyrosine-prote 99.8 8.5E-20 2.9E-24 197.2 6.5 150 675-827 13-189 (325)
254 3dtc_A Mitogen-activated prote 99.8 6.8E-19 2.3E-23 184.6 13.2 148 675-826 7-185 (271)
255 2h8h_A Proto-oncogene tyrosine 99.8 2.7E-19 9.3E-24 206.4 10.8 151 673-827 265-436 (535)
256 2a2a_A Death-associated protei 99.8 6.1E-19 2.1E-23 190.1 12.8 148 674-826 11-189 (321)
257 3eb0_A Putative uncharacterize 99.8 4.1E-19 1.4E-23 196.5 11.6 146 672-826 4-212 (383)
258 1x8b_A WEE1HU, WEE1-like prote 99.8 1E-18 3.5E-23 184.7 14.3 147 673-827 9-202 (289)
259 3fdn_A Serine/threonine-protei 99.8 8.3E-19 2.8E-23 184.9 13.3 147 674-826 8-178 (279)
260 2xot_A Amphoterin-induced prot 99.8 4.9E-19 1.7E-23 194.0 12.0 176 383-561 21-202 (361)
261 2i1m_A Macrophage colony-stimu 99.8 6.9E-19 2.4E-23 190.7 12.9 151 673-826 44-237 (333)
262 2jam_A Calcium/calmodulin-depe 99.8 6.8E-19 2.3E-23 188.1 12.7 148 674-827 8-179 (304)
263 4e7w_A Glycogen synthase kinas 99.8 3.7E-19 1.3E-23 197.4 10.9 144 675-827 40-213 (394)
264 2yex_A Serine/threonine-protei 99.8 1.3E-18 4.5E-23 182.9 14.5 151 674-827 6-179 (276)
265 1k9a_A Carboxyl-terminal SRC k 99.8 6.5E-19 2.2E-23 198.9 13.0 144 674-827 192-358 (450)
266 2v9t_B SLIT homolog 2 protein 99.8 1.4E-18 4.6E-23 176.4 13.8 151 383-536 14-164 (220)
267 2w1i_A JAK2; chromosomal rearr 99.8 1E-18 3.4E-23 188.8 13.7 149 675-826 41-219 (326)
268 2v9t_B SLIT homolog 2 protein 99.8 1.5E-18 5.1E-23 176.0 14.1 153 407-562 14-166 (220)
269 2ac3_A MAP kinase-interacting 99.8 5.7E-19 1.9E-23 189.8 11.7 150 675-827 12-193 (316)
270 3cek_A Dual specificity protei 99.8 2.9E-19 1E-23 191.8 9.3 157 667-826 20-199 (313)
271 1h6t_A Internalin B; cell adhe 99.8 1.3E-18 4.5E-23 184.5 13.9 168 381-562 47-214 (291)
272 2ozo_A Tyrosine-protein kinase 99.8 3E-19 1E-23 209.0 9.6 143 682-827 343-511 (613)
273 3mdy_A Bone morphogenetic prot 99.8 1.2E-18 4E-23 189.0 13.6 151 673-827 35-218 (337)
274 3bhy_A Death-associated protei 99.8 1.1E-18 3.9E-23 184.1 13.1 147 675-826 5-182 (283)
275 3nsz_A CK II alpha, casein kin 99.8 1.4E-18 4.8E-23 187.9 14.1 144 675-826 36-201 (330)
276 4aaa_A Cyclin-dependent kinase 99.8 7.6E-19 2.6E-23 190.2 11.8 148 675-826 25-195 (331)
277 3lzb_A Epidermal growth factor 99.8 1.9E-19 6.6E-24 194.5 7.1 149 675-826 15-190 (327)
278 3rgf_A Cyclin-dependent kinase 99.8 2.6E-19 9E-24 199.5 8.3 147 676-827 21-207 (405)
279 2xot_A Amphoterin-induced prot 99.8 1E-18 3.6E-23 191.4 12.9 159 381-539 40-204 (361)
280 2wtk_C Serine/threonine-protei 99.8 1.1E-18 3.9E-23 186.3 12.8 150 674-826 4-182 (305)
281 2buj_A Serine/threonine-protei 99.8 6.9E-19 2.4E-23 189.2 11.2 150 675-827 29-215 (317)
282 4exu_A Mitogen-activated prote 99.8 6.7E-19 2.3E-23 193.8 11.2 146 674-826 41-212 (371)
283 2clq_A Mitogen-activated prote 99.8 1.2E-18 4.2E-23 185.0 12.8 148 676-827 23-195 (295)
284 2xir_A Vascular endothelial gr 99.8 5.9E-19 2E-23 189.5 10.3 156 669-827 21-222 (316)
285 2b9h_A MAP kinase FUS3, mitoge 99.8 1.5E-18 5E-23 189.7 13.5 150 674-826 10-193 (353)
286 3ll6_A Cyclin G-associated kin 99.8 1.9E-18 6.4E-23 187.3 14.1 152 675-827 28-222 (337)
287 2i6l_A Mitogen-activated prote 99.8 1E-18 3.4E-23 188.0 11.8 149 675-826 11-195 (320)
288 3gxj_A TGF-beta receptor type- 99.8 2.1E-19 7.1E-24 191.8 6.3 149 675-827 3-184 (303)
289 2fst_X Mitogen-activated prote 99.8 4.1E-19 1.4E-23 194.9 8.8 147 674-827 28-201 (367)
290 1mqb_A Ephrin type-A receptor 99.8 8.7E-19 3E-23 189.9 11.0 150 675-827 44-222 (333)
291 3pfq_A PKC-B, PKC-beta, protei 99.8 6.8E-19 2.3E-23 208.0 11.0 150 674-827 340-514 (674)
292 1m9s_A Internalin B; cell inva 99.8 1.9E-18 6.5E-23 200.9 14.5 171 314-514 41-211 (605)
293 3lxp_A Non-receptor tyrosine-p 99.8 2.6E-18 8.8E-23 184.9 14.5 148 677-827 33-209 (318)
294 3brb_A Proto-oncogene tyrosine 99.8 8.6E-19 2.9E-23 188.1 10.6 151 673-826 32-220 (313)
295 3e3p_A Protein kinase, putativ 99.8 1.4E-18 4.8E-23 190.4 12.4 156 668-827 16-203 (360)
296 2a19_B Interferon-induced, dou 99.8 1.2E-18 4.2E-23 183.9 11.5 144 674-826 10-192 (284)
297 2vgo_A Serine/threonine-protei 99.8 2.9E-18 1E-22 181.2 14.3 146 675-826 14-183 (284)
298 3a7i_A MST3 kinase, serine/thr 99.8 2.8E-18 9.4E-23 183.2 14.0 149 675-827 22-191 (303)
299 2h6d_A 5'-AMP-activated protei 99.8 1.9E-18 6.4E-23 181.8 12.5 148 675-827 11-182 (276)
300 2yfx_A Tyrosine-protein kinase 99.8 9.5E-19 3.2E-23 189.1 10.5 150 674-826 29-216 (327)
301 3fme_A Dual specificity mitoge 99.8 1.1E-18 3.9E-23 184.8 10.8 149 674-826 6-180 (290)
302 2pzi_A Probable serine/threoni 99.8 1.2E-18 4E-23 207.3 12.2 145 675-827 80-249 (681)
303 4b8c_D Glucose-repressible alc 99.8 2.2E-19 7.4E-24 214.1 5.9 182 396-587 216-409 (727)
304 1phk_A Phosphorylase kinase; g 99.8 3.4E-18 1.2E-22 182.0 14.5 148 674-826 16-194 (298)
305 4fl3_A Tyrosine-protein kinase 99.8 1.2E-18 4E-23 204.6 11.9 144 681-827 375-544 (635)
306 3llt_A Serine/threonine kinase 99.8 1.3E-18 4.4E-23 190.7 11.5 156 664-827 24-231 (360)
307 3p23_A Serine/threonine-protei 99.8 4.7E-19 1.6E-23 198.7 8.0 147 675-827 24-198 (432)
308 3kmu_A ILK, integrin-linked ki 99.8 1.3E-18 4.3E-23 182.4 10.8 145 675-827 10-180 (271)
309 3op5_A Serine/threonine-protei 99.8 7.4E-19 2.5E-23 192.9 9.4 151 674-827 34-233 (364)
310 3eqc_A Dual specificity mitoge 99.8 8.9E-19 3E-23 192.0 10.0 148 675-827 33-202 (360)
311 3coi_A Mitogen-activated prote 99.8 1.3E-18 4.5E-23 190.1 11.3 145 675-826 24-194 (353)
312 1csn_A Casein kinase-1; phosph 99.8 1.5E-18 5.2E-23 184.6 11.4 147 675-826 10-189 (298)
313 1t4h_A Serine/threonine-protei 99.8 4.6E-18 1.6E-22 180.3 15.0 148 676-827 27-202 (290)
314 2r3i_A Cell division protein k 99.8 1.5E-18 5.1E-23 184.9 11.3 148 675-826 3-174 (299)
315 2ycf_A Serine/threonine-protei 99.8 1E-18 3.5E-23 188.4 10.1 148 674-826 9-187 (322)
316 3kvw_A DYRK2, dual specificity 99.8 2.4E-18 8.3E-23 192.9 13.5 145 675-827 97-271 (429)
317 2j7t_A Serine/threonine-protei 99.8 7.1E-19 2.4E-23 187.6 8.7 149 674-826 18-188 (302)
318 1m9s_A Internalin B; cell inva 99.8 4.3E-18 1.5E-22 197.9 15.9 172 381-566 44-215 (605)
319 3lm5_A Serine/threonine-protei 99.8 2.3E-18 7.9E-23 186.1 12.7 158 665-827 18-205 (327)
320 3e6j_A Variable lymphocyte rec 99.8 5.3E-18 1.8E-22 173.1 14.7 154 382-563 21-174 (229)
321 3f66_A Hepatocyte growth facto 99.8 1.1E-18 3.8E-23 185.8 9.9 149 675-826 25-203 (298)
322 1h6t_A Internalin B; cell adhe 99.8 4.6E-18 1.6E-22 180.3 14.6 145 99-256 47-191 (291)
323 1nxk_A MAP kinase-activated pr 99.8 2.9E-18 9.8E-23 190.5 13.6 143 675-827 61-235 (400)
324 1zy4_A Serine/threonine-protei 99.8 1.9E-18 6.3E-23 184.2 11.4 149 674-826 5-201 (303)
325 2j0j_A Focal adhesion kinase 1 99.8 1.3E-18 4.5E-23 205.0 11.1 151 674-827 389-564 (656)
326 2wqm_A Serine/threonine-protei 99.8 2.8E-18 9.7E-23 183.8 12.6 148 675-826 32-207 (310)
327 2pml_X PFPK7, Ser/Thr protein 99.8 1.7E-18 5.7E-23 188.8 10.8 147 675-827 31-222 (348)
328 1b6c_B TGF-B superfamily recep 99.7 5.1E-18 1.7E-22 184.4 14.6 152 672-827 39-223 (342)
329 3c1x_A Hepatocyte growth facto 99.7 4.7E-19 1.6E-23 194.8 6.2 149 676-827 90-268 (373)
330 3g2f_A Bone morphogenetic prot 99.7 2.6E-18 8.8E-23 186.3 11.9 149 675-827 13-200 (336)
331 3an0_A Dual specificity mitoge 99.7 1.3E-18 4.6E-23 189.0 9.2 149 674-826 50-224 (340)
332 3pls_A Macrophage-stimulating 99.7 2.1E-18 7.2E-23 183.6 10.4 148 676-826 22-199 (298)
333 1u46_A ACK-1, activated CDC42 99.7 1.2E-18 4E-23 184.9 8.3 149 675-826 18-195 (291)
334 2vx3_A Dual specificity tyrosi 99.7 5E-18 1.7E-22 187.6 13.7 148 674-827 53-230 (382)
335 1xbb_A Tyrosine-protein kinase 99.7 3.2E-18 1.1E-22 181.6 11.5 150 675-827 16-192 (291)
336 2w5a_A Serine/threonine-protei 99.7 3.7E-18 1.3E-22 179.8 12.0 152 674-826 5-187 (279)
337 2wei_A Calmodulin-domain prote 99.7 3.1E-18 1E-22 181.4 11.2 149 673-826 20-194 (287)
338 3byv_A Rhoptry kinase; malaria 99.7 4.3E-19 1.5E-23 195.8 4.4 146 674-827 72-274 (377)
339 2x7f_A TRAF2 and NCK-interacti 99.7 1.6E-18 5.6E-23 187.0 8.5 158 665-827 14-201 (326)
340 3aln_A Dual specificity mitoge 99.7 6.2E-18 2.1E-22 182.7 12.8 149 675-827 22-197 (327)
341 1dce_A Protein (RAB geranylger 99.7 1.1E-19 3.6E-24 210.2 -1.9 216 314-555 347-567 (567)
342 3com_A Serine/threonine-protei 99.7 6.9E-18 2.4E-22 181.1 12.4 148 673-826 27-196 (314)
343 4hgt_A Casein kinase I isoform 99.7 3.2E-18 1.1E-22 181.9 9.5 149 673-826 7-186 (296)
344 3uzp_A CKI-delta, CKID, casein 99.7 3.9E-18 1.3E-22 181.3 10.1 148 674-826 8-186 (296)
345 2v62_A Serine/threonine-protei 99.7 2.9E-18 9.9E-23 186.8 9.2 150 675-827 37-232 (345)
346 1fvr_A Tyrosine-protein kinase 99.7 5.2E-18 1.8E-22 183.3 10.9 148 675-827 25-213 (327)
347 1byg_A CSK, protein (C-termina 99.7 5.1E-18 1.7E-22 178.7 10.1 143 674-826 20-185 (278)
348 3a99_A Proto-oncogene serine/t 99.7 2.9E-18 9.9E-23 184.7 8.3 148 674-827 42-220 (320)
349 2vwi_A Serine/threonine-protei 99.7 1.1E-18 3.7E-23 186.2 4.9 150 674-826 14-197 (303)
350 3q60_A ROP5B; pseudokinase, tr 99.7 1.9E-18 6.4E-23 190.2 6.7 147 674-827 61-263 (371)
351 1blx_A Cyclin-dependent kinase 99.7 4.8E-18 1.6E-22 183.3 9.5 149 673-826 9-190 (326)
352 2jii_A Serine/threonine-protei 99.7 2.2E-18 7.4E-23 188.3 6.7 144 675-826 42-239 (352)
353 2dyl_A Dual specificity mitoge 99.7 1.3E-17 4.4E-22 179.2 12.5 150 674-827 24-196 (318)
354 2iwi_A Serine/threonine-protei 99.7 3.9E-18 1.3E-22 182.9 8.0 149 672-826 28-209 (312)
355 2rio_A Serine/threonine-protei 99.7 6.6E-18 2.2E-22 189.8 10.0 145 677-827 17-204 (434)
356 4ezg_A Putative uncharacterize 99.7 7.7E-18 2.6E-22 167.7 9.3 154 401-561 41-194 (197)
357 1xeu_A Internalin C; cellular 99.7 1.7E-17 5.9E-22 173.0 11.8 167 100-282 21-187 (263)
358 1wak_A Serine/threonine-protei 99.7 1.4E-17 4.7E-22 184.9 11.2 118 675-796 37-179 (397)
359 4ezg_A Putative uncharacterize 99.7 2.3E-17 7.8E-22 164.3 11.2 155 376-538 41-195 (197)
360 4azs_A Methyltransferase WBDD; 99.7 3.5E-18 1.2E-22 197.6 5.7 138 683-827 242-411 (569)
361 1q8y_A SR protein kinase; tran 99.7 1.6E-17 5.6E-22 182.7 10.8 145 675-827 19-207 (373)
362 3sv0_A Casein kinase I-like; t 99.7 1.9E-17 6.6E-22 187.5 11.5 149 674-827 6-185 (483)
363 1xeu_A Internalin C; cellular 99.7 9.7E-18 3.3E-22 175.0 8.1 168 381-563 20-187 (263)
364 1z57_A Dual specificity protei 99.7 3.6E-17 1.2E-21 177.3 12.0 145 675-827 14-206 (339)
365 1w8a_A SLIT protein; signaling 99.7 1.7E-17 5.7E-22 164.5 8.4 130 383-515 11-141 (192)
366 2eu9_A Dual specificity protei 99.7 6.4E-17 2.2E-21 176.5 12.7 145 675-827 19-211 (355)
367 2y4i_B KSR2, HKSR2, kinase sup 99.7 3.1E-18 1.1E-22 184.2 2.2 149 673-826 31-205 (319)
368 3qa8_A MGC80376 protein; kinas 99.7 1.3E-17 4.5E-22 193.2 7.3 149 674-827 13-195 (676)
369 3fhr_A MAP kinase-activated pr 99.7 7.5E-17 2.6E-21 174.8 12.7 144 674-827 27-201 (336)
370 1w8a_A SLIT protein; signaling 99.7 6.6E-17 2.2E-21 160.2 11.1 113 453-565 30-143 (192)
371 3dzo_A Rhoptry kinase domain; 99.7 1.4E-17 4.6E-22 185.9 5.3 147 673-827 76-279 (413)
372 3en9_A Glycoprotease, O-sialog 99.7 1.1E-17 3.8E-22 192.3 4.3 144 678-827 339-508 (540)
373 3sb4_A Hypothetical leucine ri 99.7 5.2E-17 1.8E-21 175.5 7.5 134 120-276 23-157 (329)
374 3uqc_A Probable conserved tran 99.6 6.9E-16 2.4E-20 163.1 13.5 119 675-796 31-161 (286)
375 2ell_A Acidic leucine-rich nuc 99.6 5E-16 1.7E-20 150.2 8.7 133 428-562 24-161 (168)
376 3sb4_A Hypothetical leucine ri 99.6 4.3E-16 1.5E-20 168.3 9.2 101 403-505 225-326 (329)
377 2ell_A Acidic leucine-rich nuc 99.6 1.4E-15 4.6E-20 147.2 11.7 134 121-280 23-160 (168)
378 2je0_A Acidic leucine-rich nuc 99.6 4.8E-16 1.6E-20 147.1 7.3 126 381-508 18-148 (149)
379 2je0_A Acidic leucine-rich nuc 99.6 3.7E-16 1.3E-20 147.9 6.4 126 429-556 18-148 (149)
380 1zar_A RIO2 kinase; serine kin 99.6 2.5E-15 8.6E-20 158.1 11.2 127 671-803 86-241 (282)
381 2wfh_A SLIT homolog 2 protein 99.6 4.5E-15 1.5E-19 146.9 12.3 108 453-561 32-139 (193)
382 2o6r_A Variable lymphocyte rec 99.6 5.2E-15 1.8E-19 144.4 12.3 132 382-516 9-140 (177)
383 2o6r_A Variable lymphocyte rec 99.6 4.7E-15 1.6E-19 144.7 11.8 113 453-565 29-141 (177)
384 2wfh_A SLIT homolog 2 protein 99.6 7.9E-15 2.7E-19 145.2 12.4 126 383-512 13-138 (193)
385 1ds9_A Outer arm dynein; leuci 99.5 4.7E-17 1.6E-21 162.1 -9.3 137 401-542 15-158 (198)
386 3m2w_A MAP kinase-activated pr 99.5 3.7E-14 1.3E-18 150.8 12.6 124 675-806 17-172 (299)
387 1ds9_A Outer arm dynein; leuci 99.5 1.5E-16 5.1E-21 158.5 -7.0 59 99-159 19-83 (198)
388 1a9n_A U2A', U2A'; complex (nu 99.5 1.9E-14 6.6E-19 140.2 7.9 132 424-561 15-153 (176)
389 1a9n_A U2A', U2A'; complex (nu 99.5 3.7E-14 1.3E-18 138.1 6.5 127 381-512 20-152 (176)
390 4fdw_A Leucine rich hypothetic 99.4 3.4E-12 1.2E-16 140.9 20.2 168 317-507 158-330 (401)
391 1zth_A RIO1 serine protein kin 99.4 1.5E-13 5.1E-18 142.7 7.9 125 677-805 49-220 (258)
392 4fdw_A Leucine rich hypothetic 99.4 6.1E-12 2.1E-16 138.9 20.1 161 316-499 203-368 (401)
393 3g39_A Variable lymphocyte rec 99.4 4.5E-13 1.5E-17 129.6 9.5 107 454-563 11-117 (170)
394 3g39_A Variable lymphocyte rec 99.4 9.1E-13 3.1E-17 127.4 11.2 106 382-490 11-116 (170)
395 2r9u_A Variable lymphocyte rec 99.4 1E-12 3.6E-17 127.5 9.9 105 455-562 15-119 (174)
396 2r9u_A Variable lymphocyte rec 99.4 1.8E-12 6.3E-17 125.7 11.1 106 382-490 14-119 (174)
397 4fs7_A Uncharacterized protein 99.3 4.9E-11 1.7E-15 131.9 21.5 238 285-553 156-393 (394)
398 4fs7_A Uncharacterized protein 99.3 4.8E-11 1.6E-15 132.0 21.1 329 115-504 64-392 (394)
399 3un9_A NLR family member X1; l 99.3 2.1E-13 7.2E-18 149.2 -1.8 161 122-282 72-254 (372)
400 3un9_A NLR family member X1; l 99.2 9.6E-13 3.3E-17 143.9 0.0 137 145-281 71-225 (372)
401 2ifg_A High affinity nerve gro 99.2 2.3E-11 7.9E-16 132.1 8.3 105 383-490 11-117 (347)
402 2ifg_A High affinity nerve gro 99.2 3.5E-11 1.2E-15 130.7 9.5 104 408-514 12-117 (347)
403 4gyi_A RIO2 kinase; protein ki 99.1 1E-10 3.5E-15 126.3 8.8 118 676-796 96-237 (397)
404 4gt6_A Cell surface protein; l 99.1 5.1E-09 1.8E-13 115.6 22.6 309 211-560 79-390 (394)
405 4gt6_A Cell surface protein; l 99.0 8.2E-08 2.8E-12 105.9 26.4 318 115-512 56-390 (394)
406 2ra8_A Uncharacterized protein 98.9 1.1E-09 3.9E-14 118.5 6.6 181 97-280 106-320 (362)
407 3rw6_A Nuclear RNA export fact 98.9 3.4E-11 1.2E-15 123.8 -6.8 24 84-107 76-99 (267)
408 2ra8_A Uncharacterized protein 98.7 1.1E-08 3.8E-13 110.7 6.3 211 121-351 106-341 (362)
409 4h09_A Hypothetical leucine ri 98.6 2.6E-06 9E-11 93.2 22.4 80 193-277 44-123 (379)
410 4h09_A Hypothetical leucine ri 98.6 9.5E-06 3.2E-10 88.7 26.1 107 398-507 234-340 (379)
411 3tm0_A Aminoglycoside 3'-phosp 98.3 1.3E-06 4.6E-11 90.2 10.4 107 672-779 11-123 (263)
412 1io0_A Tropomodulin; LRR prote 98.3 6.2E-08 2.1E-12 94.6 -0.4 46 114-159 28-78 (185)
413 3rw6_A Nuclear RNA export fact 98.3 8.8E-08 3E-12 98.4 0.4 67 425-493 167-237 (267)
414 1io0_A Tropomodulin; LRR prote 98.2 1.7E-07 5.7E-12 91.5 -0.3 44 422-465 30-78 (185)
415 1nd4_A Aminoglycoside 3'-phosp 98.2 1.9E-06 6.4E-11 88.7 6.9 93 684-779 29-125 (264)
416 3dxp_A Putative acyl-COA dehyd 97.8 5.5E-05 1.9E-09 81.9 10.3 99 680-779 43-157 (359)
417 3e4g_A ATP synthase subunit S, 97.2 0.00015 5E-09 69.0 2.7 34 196-229 62-95 (176)
418 3e4g_A ATP synthase subunit S, 97.2 0.0003 1E-08 66.9 4.7 84 219-302 61-150 (176)
419 3r70_A Aminoglycoside phosphot 96.9 0.0098 3.4E-07 62.8 14.7 96 676-779 38-143 (320)
420 3sg8_A APH(2'')-ID; antibiotic 96.4 0.017 5.9E-07 60.4 11.8 94 680-779 25-132 (304)
421 3f7w_A Putative fructosamine-3 96.4 0.011 3.8E-07 61.3 10.2 54 676-729 16-69 (288)
422 3d1u_A Putative fructosamine-3 96.4 0.012 4.1E-07 61.1 10.2 95 678-780 18-115 (288)
423 1pgv_A TMD-1, tropomodulin TMD 96.3 0.00059 2E-08 66.1 -0.0 41 119-159 38-83 (197)
424 3rfe_A Platelet glycoprotein I 96.2 0.0089 3E-07 53.9 6.8 56 102-159 12-68 (130)
425 1pgv_A TMD-1, tropomodulin TMD 96.2 0.0029 9.9E-08 61.2 3.8 83 98-180 41-136 (197)
426 3rfe_A Platelet glycoprotein I 96.0 0.0096 3.3E-07 53.6 6.3 56 223-280 12-68 (130)
427 3ovc_A Hygromycin-B 4-O-kinase 95.3 0.11 3.6E-06 55.9 12.2 58 679-742 45-104 (362)
428 2olc_A MTR kinase, methylthior 95.1 0.021 7.3E-07 62.2 6.1 60 680-739 35-105 (397)
429 3ats_A Putative uncharacterize 95.0 0.036 1.2E-06 59.3 7.5 64 680-743 25-102 (357)
430 3tdw_A Gentamicin resistance p 94.9 0.15 5.3E-06 53.1 12.0 94 680-779 24-129 (306)
431 4gkh_A Aminoglycoside 3'-phosp 93.8 0.38 1.3E-05 48.9 11.7 61 682-745 31-94 (272)
432 3dxq_A Choline/ethanolamine ki 90.5 0.38 1.3E-05 49.9 6.8 93 680-779 23-119 (301)
433 2pyw_A Uncharacterized protein 87.9 1.4 4.8E-05 48.0 9.4 26 680-706 39-64 (420)
434 2q83_A YTAA protein; 2635576, 87.4 2.1 7.1E-05 44.8 10.1 43 681-728 38-80 (346)
435 2ppq_A HSK, HK, homoserine kin 86.8 1.5 5.2E-05 45.6 8.5 62 665-729 7-73 (322)
436 3c5i_A Choline kinase; choline 83.2 1.2 4.3E-05 47.4 5.9 53 681-734 39-100 (369)
437 1zyl_A Hypothetical protein YI 82.2 3 0.0001 43.4 8.3 47 681-729 32-78 (328)
438 3jr1_A Putative fructosamine-3 79.3 9 0.00031 39.6 10.5 91 679-779 40-135 (312)
439 3cxl_A N-chimerin; SH2, RHO-GA 76.5 0.19 6.5E-06 55.8 -3.5 57 681-740 148-213 (463)
440 2qg7_A Ethanolamine kinase PV0 60.1 17 0.00057 39.9 7.7 95 681-778 114-210 (458)
441 1nw1_A Choline kinase (49.2 KD 56.0 20 0.00067 38.9 7.4 95 681-779 79-182 (429)
442 3csv_A Aminoglycoside phosphot 48.1 54 0.0019 33.7 9.1 46 681-729 24-70 (333)
443 2ks1_B Epidermal growth factor 46.3 18 0.00061 25.1 3.1 13 642-654 26-38 (44)
444 3feg_A Choline/ethanolamine ki 46.3 21 0.00073 37.9 5.5 96 681-779 56-160 (379)
445 3mes_A Choline kinase; malaria 41.2 34 0.0012 36.9 6.2 95 681-778 76-179 (424)
446 3i1a_A Spectinomycin phosphotr 37.9 36 0.0012 35.3 5.7 36 686-728 34-69 (339)
447 2l2t_A Receptor tyrosine-prote 30.8 31 0.0011 23.9 2.4 7 648-654 31-37 (44)
448 3f2s_A CK, chetk-alpha, cholin 28.0 1.3E+02 0.0044 32.0 8.0 98 681-780 58-182 (401)
449 3g15_A CK, chetk-alpha, cholin 24.7 2.2E+02 0.0075 30.0 9.2 28 681-708 58-93 (401)
No 1
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=7.7e-81 Score=754.18 Aligned_cols=563 Identities=34% Similarity=0.550 Sum_probs=443.9
Q ss_pred hccCCCHHHHHHHHHHHhhcCCCCCCcCCCCCCCCCCCCcccceecCCCCCcEEEEEcCCCCCccc---cC---------
Q 047196 48 AAASNITTDQQALLALKAHISYDPTNLLAQNSTSNTSVCNWIGITCNVNSHRVTALNISSLNLQGT---IP--------- 115 (827)
Q Consensus 48 ~~~~~~~~~~~aLl~~k~~~~~~~~~~l~~w~~~~~~~C~W~gv~C~~~~~~v~~L~L~~~~l~g~---~~--------- 115 (827)
+++++.++|++||++||+++. ||. .+++|. .++|||+|.||+|+ +++|+.|||+++++.|. +|
T Consensus 5 ~~~~~~~~~~~all~~k~~~~-~~~-~l~~W~-~~~~~C~w~gv~C~--~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L 79 (768)
T 3rgz_A 5 SPSQSLYREIHQLISFKDVLP-DKN-LLPDWS-SNKNPCTFDGVTCR--DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGL 79 (768)
T ss_dssp ---CCHHHHHHHHHHHHTTCS-CTT-SSTTCC-TTSCGGGSTTEEEE--TTEEEEEECTTSCCCEEHHHHHHHTTTCTTC
T ss_pred ccccCCHHHHHHHHHHHhhCC-Ccc-cccCCC-CCCCCcCCcceEEC--CCcEEEEECCCCCcCCccCccChhHhccCcc
Confidence 445557899999999999995 887 899998 67899999999998 58999999999999886 43
Q ss_pred --------------ccccCCCCCCEEECCCCCCCccCCh--hhhhccccceEEecCCCCCCcccccc-CCCCCCcEEEcC
Q 047196 116 --------------PQLGNLSSLTTLNLSHNKLSGDIPP--SIFTMHKLKFLDFSDNQLSGSLSSVT-FNLSSVLDIRLD 178 (827)
Q Consensus 116 --------------~~l~~L~~L~~L~Ls~N~l~g~~p~--~~~~l~~L~~LdLs~N~l~g~~p~~~-~~l~~L~~L~L~ 178 (827)
+.++++++|++|||++|.++|.+|. .++++++|++|||++|.+++.+|..+ .++++|++|+|+
T Consensus 80 ~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls 159 (768)
T 3rgz_A 80 ESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLS 159 (768)
T ss_dssp CEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECC
T ss_pred cccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECC
Confidence 5788899999999999999999998 89999999999999999988877765 667777777777
Q ss_pred CCCCCCCcchhH---h---------------------hccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCccc
Q 047196 179 SDKLSGELPVNI---C---------------------NYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGA 234 (827)
Q Consensus 179 ~n~l~g~ip~~~---~---------------------~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~ 234 (827)
+|.+++..|..+ . ..+++|++|++++|.+++.+|. ++++++|++|++++|.+++.
T Consensus 160 ~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~ 238 (768)
T 3rgz_A 160 ANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGD 238 (768)
T ss_dssp SSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSC
T ss_pred CCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCc
Confidence 777665555431 0 1234566666666666665555 66666666666666666555
Q ss_pred CCCcCcCCccccEEEcccc----------------------cccccccccccCc-CCCcEEEeecccCcccCchhhhcCC
Q 047196 235 IPKEISNLTILRKISLRNN----------------------KLRGEIPHEIGYL-PNLENLVLGFNNLVGVVPAAIFNMS 291 (827)
Q Consensus 235 ~p~~~~~l~~L~~L~Ls~N----------------------~l~~~~p~~~~~l-~~L~~L~Ls~N~l~~~~p~~~~~l~ 291 (827)
+|..++++++|++|++++| +++|.+|..+..+ ++|++|+|++|++++.+|..+.+++
T Consensus 239 ~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~ 318 (768)
T 3rgz_A 239 FSRAISTCTELKLLNISSNQFVGPIPPLPLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCS 318 (768)
T ss_dssp HHHHTTTCSSCCEEECCSSCCEESCCCCCCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCT
T ss_pred ccHHHhcCCCCCEEECCCCcccCccCccccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCC
Confidence 5555555544444444444 4444566666554 7788888888888777787788888
Q ss_pred CccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCC-CCcEEEcCCCccee----------------
Q 047196 292 TVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNAS-KLVYLDMGTNSFSG---------------- 354 (827)
Q Consensus 292 ~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g---------------- 354 (827)
+|++|++++|.+.|.+|......+++|++|++++|++++.+|..+.+++ +|+.|++++|.++|
T Consensus 319 ~L~~L~L~~n~l~~~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~ 398 (768)
T 3rgz_A 319 LLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQE 398 (768)
T ss_dssp TCCEEECCSSEEEEECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCE
T ss_pred CccEEECCCCcccCcCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccE
Confidence 8888888888887777766444677777777777777777776665554 55555555555554
Q ss_pred ----------ecCCCc---------cCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCcc
Q 047196 355 ----------IIPNTI---------GLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNK 415 (827)
Q Consensus 355 ----------~~p~~~---------~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 415 (827)
.+|..+ .+++|.+++.+|..+..++ +|++|++++|++++.+|..+..+++|+.|++++|+
T Consensus 399 L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~N~ 477 (768)
T 3rgz_A 399 LYLQNNGFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLS-KLRDLKLWLNMLEGEIPQELMYVKTLETLILDFND 477 (768)
T ss_dssp EECCSSEEEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSC
T ss_pred EECCCCccccccCHHHhcCCCCCEEECcCCcccCcccHHHhcCC-CCCEEECCCCcccCcCCHHHcCCCCceEEEecCCc
Confidence 444322 2556666666777776665 77788888888887888888888888888888888
Q ss_pred ccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCcc
Q 047196 416 LTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPST 495 (827)
Q Consensus 416 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 495 (827)
++|.+|..+.++++|++|+|++|++++.+|.++..+++|++|++++|+++|.+|..++++++|++||+++|+++|.+|..
T Consensus 478 l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~ 557 (768)
T 3rgz_A 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAA 557 (768)
T ss_dssp CCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGG
T ss_pred ccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChH
Confidence 88888888888888888888888888888888888889999999999998889998999999999999999888877765
Q ss_pred cc----------------------------------------------------------------------cccccccc
Q 047196 496 FW----------------------------------------------------------------------NLKDILFF 505 (827)
Q Consensus 496 ~~----------------------------------------------------------------------~l~~L~~L 505 (827)
+. .+++|++|
T Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~L 637 (768)
T 3rgz_A 558 MFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFL 637 (768)
T ss_dssp GGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEE
T ss_pred HhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEE
Confidence 43 34678899
Q ss_pred CCCCCCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCCCc---CCceEeCcCCcCe
Q 047196 506 DLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESFG---YLTELNLSFNKLE 582 (827)
Q Consensus 506 dLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~---~L~~L~ls~N~l~ 582 (827)
||++|+++|.+|.++++++.|+.|||++|+++|.||..++++++|+.|||++|+++|.||..++ .|++||+|+|+++
T Consensus 638 dLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~ 717 (768)
T 3rgz_A 638 DMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLS 717 (768)
T ss_dssp ECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEE
T ss_pred ECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999998775 7899999999999
Q ss_pred ecCCCCCCCCCCcccccccCccccCCCCCCCccccccc
Q 047196 583 GEIPRGGPFANFTAKSFMGNEKLCGLPNLQFPKCKRRT 620 (827)
Q Consensus 583 g~ip~~~~~~~~~~~~~~~n~~lc~~p~~~~~~c~~~~ 620 (827)
|+||.+++|.+++..+|.||+++||.| .++|....
T Consensus 718 g~iP~~~~~~~~~~~~~~gN~~Lcg~~---l~~C~~~~ 752 (768)
T 3rgz_A 718 GPIPEMGQFETFPPAKFLNNPGLCGYP---LPRCDPSN 752 (768)
T ss_dssp EECCSSSSGGGSCGGGGCSCTEEESTT---SCCCCSCC
T ss_pred ccCCCchhhccCCHHHhcCCchhcCCC---CcCCCCCc
Confidence 999999999999999999999999965 24787544
No 2
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=100.00 E-value=4.8e-63 Score=598.54 Aligned_cols=479 Identities=31% Similarity=0.477 Sum_probs=422.8
Q ss_pred cEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcC
Q 047196 99 RVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLD 178 (827)
Q Consensus 99 ~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~ 178 (827)
+++.|+|++|.+.+.++ +.++++|++|+|++|++++.+|. ++++++|++|+|++|.+++.+|..+.++++|++|+++
T Consensus 179 ~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~l~~~~~~~l~~l~~L~~L~Ls 255 (768)
T 3rgz_A 179 ELKHLAISGNKISGDVD--VSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNIS 255 (768)
T ss_dssp TCCEEECCSSEEESCCB--CTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSCCCSCHHHHTTTCSSCCEEECC
T ss_pred CCCEEECCCCcccccCC--cccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCcCCCcccHHHhcCCCCCEEECC
Confidence 56666666666655443 36778888888888888877776 8888888888888888888888888888888888888
Q ss_pred CCCCCCCcchhHhhccccccEEEeecccccccCCccCCCC-CCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccc
Q 047196 179 SDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKC-KRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRG 257 (827)
Q Consensus 179 ~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 257 (827)
+|.+.|.+|.. .+++|++|++++|.++|.+|..+.+. ++|++|++++|.+++.+|..++++++|++|++++|+++|
T Consensus 256 ~n~l~~~~~~~---~l~~L~~L~L~~n~l~~~ip~~~~~~~~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~ 332 (768)
T 3rgz_A 256 SNQFVGPIPPL---PLKSLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSG 332 (768)
T ss_dssp SSCCEESCCCC---CCTTCCEEECCSSEEEESCCCCSCTTCTTCSEEECCSSEEEECCCGGGGGCTTCCEEECCSSEEEE
T ss_pred CCcccCccCcc---ccCCCCEEECcCCccCCccCHHHHhhcCcCCEEECcCCcCCCccchHHhcCCCccEEECCCCcccC
Confidence 88888877765 35588999999999988888888775 899999999999999999999999999999999999988
Q ss_pred ccccc-ccCcCCCcEEEeecccCcccCchhhhcCC-CccEEEecCCccccccChhhhc-CCCCccEEeCcCCccccccCc
Q 047196 258 EIPHE-IGYLPNLENLVLGFNNLVGVVPAAIFNMS-TVKKIYLLDNSLLGSFSLGIDL-SLPNVERLNLGLNRFSGTIPS 334 (827)
Q Consensus 258 ~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~-~l~~L~~L~L~~N~l~~~~p~ 334 (827)
.+|.. ++.+++|++|+|++|++++.+|..+.++. +|+.|++++|.+.|.+|..+.. .+++|++|++++|++++.+|.
T Consensus 333 ~ip~~~l~~l~~L~~L~Ls~n~l~~~~p~~l~~l~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~p~ 412 (768)
T 3rgz_A 333 ELPMDTLLKMRGLKVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPP 412 (768)
T ss_dssp ECCHHHHTTCTTCCEEECCSSEEEECCCTTHHHHTTTCSEEECCSSEEEEECCTTTTCSTTCCCCEEECCSSEEEEECCG
T ss_pred cCCHHHHhcCCCCCEEeCcCCccCccccHHHHhhhcCCcEEEccCCCcCCCcChhhhhcccCCccEEECCCCccccccCH
Confidence 88876 88999999999999999999999988887 8999999999998888876652 278899999999999999999
Q ss_pred cccCCCCCcEEEcCCCcceeecCCCc---------cCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCC
Q 047196 335 FITNASKLVYLDMGTNSFSGIIPNTI---------GLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSN 405 (827)
Q Consensus 335 ~~~~l~~L~~L~Ls~N~l~g~~p~~~---------~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~ 405 (827)
.+.++++|+.|++++|++++.+|..+ .+++|.+++.+|..+..+. +|++|++++|+++|.+|..+.++++
T Consensus 413 ~l~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l~~l~~ 491 (768)
T 3rgz_A 413 TLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVK-TLETLILDFNDLTGEIPSGLSNCTN 491 (768)
T ss_dssp GGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCT-TCCEEECCSSCCCSCCCGGGGGCTT
T ss_pred HHhcCCCCCEEECcCCcccCcccHHHhcCCCCCEEECCCCcccCcCCHHHcCCC-CceEEEecCCcccCcCCHHHhcCCC
Confidence 99999999999999999999888643 4789999999999998887 8999999999999999999999999
Q ss_pred CceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccc-------------
Q 047196 406 LLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCL------------- 472 (827)
Q Consensus 406 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~------------- 472 (827)
|++|+|++|++++.+|.+++.+++|++|+|++|+++|.+|..+.++++|++|++++|+++|.+|..+
T Consensus 492 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~ 571 (768)
T 3rgz_A 492 LNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQSGKIAANFIA 571 (768)
T ss_dssp CCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCCEEECCSSEEESBCCGGGGTTTTCBCCSTTC
T ss_pred CCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCCEEECCCCccCCcCChHHhcccchhhhhccc
Confidence 9999999999999999999999999999999999999999999999999999999999998887654
Q ss_pred ---------------------------------------------------------cCCCCCCccccCCCcccccCCcc
Q 047196 473 ---------------------------------------------------------GNLTSLRSPDLGSNRLTSVLPST 495 (827)
Q Consensus 473 ---------------------------------------------------------~~l~~L~~L~Ls~N~l~~~~p~~ 495 (827)
+.+++|++|||++|+++|.+|.+
T Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~ 651 (768)
T 3rgz_A 572 GKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKE 651 (768)
T ss_dssp SCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGG
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccccceecccCchhhhccccccEEECcCCcccccCCHH
Confidence 33567899999999999999999
Q ss_pred ccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCC--CcCCce
Q 047196 496 FWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPES--FGYLTE 573 (827)
Q Consensus 496 ~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~--~~~L~~ 573 (827)
+++++.|+.|||++|+++|.+|..+++++.|+.||||+|+++|.||..+++++.|+.||+++|+++|.||+. |..+..
T Consensus 652 l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~ 731 (768)
T 3rgz_A 652 IGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPP 731 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCG
T ss_pred HhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999974 445666
Q ss_pred EeCcCCc-Ceec
Q 047196 574 LNLSFNK-LEGE 584 (827)
Q Consensus 574 L~ls~N~-l~g~ 584 (827)
..+.+|. ++|.
T Consensus 732 ~~~~gN~~Lcg~ 743 (768)
T 3rgz_A 732 AKFLNNPGLCGY 743 (768)
T ss_dssp GGGCSCTEEEST
T ss_pred HHhcCCchhcCC
Confidence 6677774 6764
No 3
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=3.9e-60 Score=560.35 Aligned_cols=494 Identities=19% Similarity=0.277 Sum_probs=362.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCC-------cCCCCCCCCCCCCcc---cceecCCCCCcEEEEEcCCCCCccccCccccC
Q 047196 51 SNITTDQQALLALKAHISYDPTN-------LLAQNSTSNTSVCNW---IGITCNVNSHRVTALNISSLNLQGTIPPQLGN 120 (827)
Q Consensus 51 ~~~~~~~~aLl~~k~~~~~~~~~-------~l~~w~~~~~~~C~W---~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~ 120 (827)
+....|++||.+++.++..+... ...+|. .+.|||.| .||+|+.. ++|+.|+|++++++|.+|+++++
T Consensus 26 ~~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~-~~~~~c~w~~~~GV~C~~~-~~V~~L~L~~~~l~g~lp~~l~~ 103 (636)
T 4eco_A 26 AEYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWN-FNKELDMWGAQPGVSLNSN-GRVTGLSLEGFGASGRVPDAIGQ 103 (636)
T ss_dssp CHHHHHHHHHHHHHHHTTGGGCCCCC------CCCC-CSSCGGGTTCCTTEEECTT-CCEEEEECTTSCCEEEECGGGGG
T ss_pred hhHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCC-CCCCcccccCCCCeEEcCC-CCEEEEEecCcccCCcCChHHhc
Confidence 34457999999999997433222 234787 56899999 99999865 89999999999999999999999
Q ss_pred CCCCCEEECCCCCC------Cc------cCChhhhhccccceEEecCCCCCCccccccCCC-CCCcEEEcCCCCCCCCcc
Q 047196 121 LSSLTTLNLSHNKL------SG------DIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNL-SSVLDIRLDSDKLSGELP 187 (827)
Q Consensus 121 L~~L~~L~Ls~N~l------~g------~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l-~~L~~L~L~~n~l~g~ip 187 (827)
|++|++|||++|.+ .| .+|.+. +.+|+ +++++|.+.+.+|..+..+ ..+..+++....+...
T Consensus 104 L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~--~~~l~-l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~-- 178 (636)
T 4eco_A 104 LTELEVLALGSHGEKVNERLFGPKGISANMSDEQ--KQKMR-MHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKS-- 178 (636)
T ss_dssp CTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHH--HHHHH-THHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCC--
T ss_pred CccceEEECcCCccccCCccccccccccCchHHH--HHHHH-hhHHHhhhccCchhhHHHHHHHHhhcCccccccccc--
Confidence 99999999999976 44 567666 77888 9999999998887765521 1111122221111100
Q ss_pred hhHhhccccccEEEe--ecccccccCCccCCCCCCCcEEEccCCCCccc-----------------CCCcCc--CCcccc
Q 047196 188 VNICNYLHYLKVLFL--AKNMFHGQIPLALSKCKRLQLLNLGFKKLSGA-----------------IPKEIS--NLTILR 246 (827)
Q Consensus 188 ~~~~~~~~~L~~L~L--s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~-----------------~p~~~~--~l~~L~ 246 (827)
....++.+.+ ..|+++| +|..++++++|++|+|++|.+++. +|..++ ++++|+
T Consensus 179 -----~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~ 252 (636)
T 4eco_A 179 -----SRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLT 252 (636)
T ss_dssp -----CCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCC
T ss_pred -----cccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCC
Confidence 0001222222 2566777 777777777777777777777775 777777 777777
Q ss_pred EEEcccccccccccccccCcCCCcEEEeeccc-Ccc-cCchhhhcC------CCccEEEecCCccccccCh--hhhcCCC
Q 047196 247 KISLRNNKLRGEIPHEIGYLPNLENLVLGFNN-LVG-VVPAAIFNM------STVKKIYLLDNSLLGSFSL--GIDLSLP 316 (827)
Q Consensus 247 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l------~~L~~L~l~~n~l~~~~~~--~~~~~l~ 316 (827)
+|+|++|++.+.+|..++++++|++|+|++|+ ++| .+|..+.++ ++|++|++++|.+. .+|. .+. .++
T Consensus 253 ~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~-~l~ 330 (636)
T 4eco_A 253 DVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQ-KMK 330 (636)
T ss_dssp EEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHT-TCT
T ss_pred EEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhc-cCC
Confidence 77777777777777777777777777777777 777 777777665 77777777777777 6665 444 677
Q ss_pred CccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhccccc-ccEEEccCCcCccc
Q 047196 317 NVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMS-LENIYISNCNIGGS 395 (827)
Q Consensus 317 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~-L~~L~Ls~N~l~g~ 395 (827)
+|++|++++|+++|.+| .+..+++|+.|++++|+++ .+ |..+..+. + |++|++++|+++ .
T Consensus 331 ~L~~L~L~~N~l~g~ip-~~~~l~~L~~L~L~~N~l~-~l---------------p~~l~~l~-~~L~~L~Ls~N~l~-~ 391 (636)
T 4eco_A 331 KLGMLECLYNQLEGKLP-AFGSEIKLASLNLAYNQIT-EI---------------PANFCGFT-EQVENLSFAHNKLK-Y 391 (636)
T ss_dssp TCCEEECCSCCCEEECC-CCEEEEEESEEECCSSEEE-EC---------------CTTSEEEC-TTCCEEECCSSCCS-S
T ss_pred CCCEEeCcCCcCccchh-hhCCCCCCCEEECCCCccc-cc---------------cHhhhhhc-ccCcEEEccCCcCc-c
Confidence 77888888888777777 7777777888888777776 32 33445554 4 788888888877 6
Q ss_pred cCccccCCC--CCceEeccCcccccccccccc-------CCCCCcEEECCCCCCCCCCCcc-ccccccccEEecCCCccc
Q 047196 396 IPQLISNLS--NLLLLDLEGNKLTGSIPVTFG-------RLQKLQGLYLPFNKLAGSIPDQ-LCHLARLNTLGLAGNKFS 465 (827)
Q Consensus 396 ~p~~~~~l~--~L~~L~Ls~N~l~g~~p~~~~-------~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~ 465 (827)
+|..+..++ +|+.|++++|++++.+|..+. .+++|++|+|++|+++ .+|.. +..+++|+.|+|++|+++
T Consensus 392 lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~~~l~~L~~L~Ls~N~l~ 470 (636)
T 4eco_A 392 IPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS-KFPKELFSTGSPLSSINLMGNMLT 470 (636)
T ss_dssp CCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC-SCCTHHHHTTCCCSEEECCSSCCS
T ss_pred cchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC-cCCHHHHccCCCCCEEECCCCCCC
Confidence 777766654 788888888888877777777 6778888888888887 44444 445778888888888887
Q ss_pred ccCCccccC-C-------CCCCccccCCCcccccCCcccc--ccccccccCCCCCCCCCCCcccccccccCceEEc----
Q 047196 466 GSIPSCLGN-L-------TSLRSPDLGSNRLTSVLPSTFW--NLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINL---- 531 (827)
Q Consensus 466 ~~~p~~~~~-l-------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L---- 531 (827)
.+|..+.. . ++|++|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..++.++.|+.|++
T Consensus 471 -~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~-ip~~~~~l~~L~~L~Ls~N~ 547 (636)
T 4eco_A 471 -EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYNSFSK-FPTQPLNSSTLKGFGIRNQR 547 (636)
T ss_dssp -BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCSSCCEEECCSCB
T ss_pred -CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCCCCCC-cChhhhcCCCCCEEECCCCc
Confidence 55554332 2 27888888888887 5666665 78888888888888887 7778888888888888
Q ss_pred --ccceeeecccccccCCCCCCEEECCCCcceeecCCCC-cCCceEeCcCCcCee
Q 047196 532 --SRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF-GYLTELNLSFNKLEG 583 (827)
Q Consensus 532 --s~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~-~~L~~L~ls~N~l~g 583 (827)
++|++.+.+|..++++++|+.|+|++|++ +.+|..+ .+|+.||+++|++..
T Consensus 548 ~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~~~~~L~~L~Ls~N~l~~ 601 (636)
T 4eco_A 548 DAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEKITPNISVLDIKDNPNIS 601 (636)
T ss_dssp CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCTTCCEEECCSCTTCE
T ss_pred ccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHhHhCcCCEEECcCCCCcc
Confidence 56888999999999999999999999999 6777655 589999999998764
No 4
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=9.6e-58 Score=548.63 Aligned_cols=475 Identities=19% Similarity=0.239 Sum_probs=352.0
Q ss_pred hccCCCHHHHHHHHHHHhhcCCCCCCcCCCCCCCC----CCC--Ccc------------cceecCCCCCcEEEEEcCCCC
Q 047196 48 AAASNITTDQQALLALKAHISYDPTNLLAQNSTSN----TSV--CNW------------IGITCNVNSHRVTALNISSLN 109 (827)
Q Consensus 48 ~~~~~~~~~~~aLl~~k~~~~~~~~~~l~~w~~~~----~~~--C~W------------~gv~C~~~~~~v~~L~L~~~~ 109 (827)
.++++..+|++||++||+++ .+| +|...+ .+| |.| .||+|+. .++|+.|+|++++
T Consensus 262 ~~~~~~~~d~~ALl~~k~~l-~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~-~~~V~~L~Ls~~~ 334 (876)
T 4ecn_A 262 KETAEYIKDYKALKAIWEAL-DGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN-NGRVTGLSLAGFG 334 (876)
T ss_dssp CCCCHHHHHHHHHHHHHHHT-TGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT-TSCEEEEECTTTC
T ss_pred cccccchHHHHHHHHHHHHc-CCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC-CCCEEEEECccCC
Confidence 34455678999999999998 455 675333 355 999 9999986 5899999999999
Q ss_pred CccccCccccCCCCCCEEEC-CCCCCCccCChhhhhc-------------------------------------------
Q 047196 110 LQGTIPPQLGNLSSLTTLNL-SHNKLSGDIPPSIFTM------------------------------------------- 145 (827)
Q Consensus 110 l~g~~~~~l~~L~~L~~L~L-s~N~l~g~~p~~~~~l------------------------------------------- 145 (827)
+.|.+|++|++|++|++||| ++|.++|..|-.....
T Consensus 335 L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~ 414 (876)
T 4ecn_A 335 AKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEM 414 (876)
T ss_dssp CEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTS
T ss_pred CCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCccc
Confidence 99999999999999999999 9998887744221100
Q ss_pred --------cccceEEec--CCCCCCccccccCCCCCCcEEEcCCCCCCC-CcchhHhhccccccEEEeecccccccCCcc
Q 047196 146 --------HKLKFLDFS--DNQLSGSLSSVTFNLSSVLDIRLDSDKLSG-ELPVNICNYLHYLKVLFLAKNMFHGQIPLA 214 (827)
Q Consensus 146 --------~~L~~LdLs--~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g-~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~ 214 (827)
..++.+.++ .|+++| +|..+.++++|++|+|++|.++| .+|..+.. .+.|.++|.+|..
T Consensus 415 ~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~---------~s~n~~~g~iP~~ 484 (876)
T 4ecn_A 415 KPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWED---------ANSDYAKQYENEE 484 (876)
T ss_dssp CCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSC---------TTSHHHHHHTTSC
T ss_pred cccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccc---------cccccccccCChh
Confidence 111112221 144444 44444444444444444444443 12211110 1113333368999
Q ss_pred CC--CCCCCcEEEccCCCCcccCCCcCcCCccccEEEccccc-ccc-cccccccCcC-------CCcEEEeecccCcccC
Q 047196 215 LS--KCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNK-LRG-EIPHEIGYLP-------NLENLVLGFNNLVGVV 283 (827)
Q Consensus 215 l~--~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~Ls~N~l~~~~ 283 (827)
++ ++++|++|+|++|.+.+.+|..++++++|++|+|++|+ ++| .+|..++.++ +|++|+|++|+++ .+
T Consensus 485 l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~i 563 (876)
T 4ecn_A 485 LSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EF 563 (876)
T ss_dssp CCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BC
T ss_pred hhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-cc
Confidence 88 99999999999999999999999999999999999998 888 8898777666 9999999999999 78
Q ss_pred ch--hhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCC-CcEEEcCCCcceeecCCCc
Q 047196 284 PA--AIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASK-LVYLDMGTNSFSGIIPNTI 360 (827)
Q Consensus 284 p~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~-L~~L~Ls~N~l~g~~p~~~ 360 (827)
|. .+.++++|+.|++++|.+. .+| .+ ..+++|+.|+|++|+++ .+|..+..+++ |+.|++++|.++ .+|.
T Consensus 564 p~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~-~~L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~-- 636 (876)
T 4ecn_A 564 PASASLQKMVKLGLLDCVHNKVR-HLE-AF-GTNVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPN-- 636 (876)
T ss_dssp CCHHHHTTCTTCCEEECTTSCCC-BCC-CC-CTTSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCS--
T ss_pred CChhhhhcCCCCCEEECCCCCcc-cch-hh-cCCCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCch--
Confidence 88 8999999999999999988 777 44 37899999999999999 88888999998 999999999987 4443
Q ss_pred cCCCCCCcccCCCchhccc-ccccEEEccCCcCccccCccc---c--CCCCCceEeccCccccccccccccCCCCCcEEE
Q 047196 361 GLTGNPLDGVLPTSIGNLS-MSLENIYISNCNIGGSIPQLI---S--NLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLY 434 (827)
Q Consensus 361 ~l~~n~l~g~~p~~~~~~~-~~L~~L~Ls~N~l~g~~p~~~---~--~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 434 (827)
.+.... .+|+.|++++|+++|.+|... . .+++|+.|+|++|+++...+..+..+++|+.|+
T Consensus 637 -------------~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~~lp~~~~~~l~~L~~L~ 703 (876)
T 4ecn_A 637 -------------IFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQKFPTELFATGSPISTII 703 (876)
T ss_dssp -------------CCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCCSCCHHHHHTTCCCSEEE
T ss_pred -------------hhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCCccCHHHHccCCCCCEEE
Confidence 222222 149999999999998777543 2 345899999999999954334456899999999
Q ss_pred CCCCCCCCCCCccccc--------cccccEEecCCCcccccCCcccc--CCCCCCccccCCCcccccCCccccccccccc
Q 047196 435 LPFNKLAGSIPDQLCH--------LARLNTLGLAGNKFSGSIPSCLG--NLTSLRSPDLGSNRLTSVLPSTFWNLKDILF 504 (827)
Q Consensus 435 Ls~N~l~g~~p~~~~~--------l~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 504 (827)
|++|+++ .+|..+.. +++|+.|+|++|+++ .+|..+. .+++|+.|+|++|.+++ +|..+..+++|+.
T Consensus 704 Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L~~L~~ 780 (876)
T 4ecn_A 704 LSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNSSQLKA 780 (876)
T ss_dssp CCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGCTTCCE
T ss_pred CCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcCCCCCE
Confidence 9999998 66765543 338999999999999 7888887 89999999999999998 7888999999999
Q ss_pred cCCCCCCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCCC-cCCceEeCcCCcCe
Q 047196 505 FDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF-GYLTELNLSFNKLE 582 (827)
Q Consensus 505 LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~-~~L~~L~ls~N~l~ 582 (827)
|+|++|. ++++|++.+.+|..++++++|+.|+|++|++ +.+|..+ .+|+.|||++|++.
T Consensus 781 L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~l~~~L~~LdLs~N~l~ 840 (876)
T 4ecn_A 781 FGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEKLTPQLYILDIADNPNI 840 (876)
T ss_dssp EECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSCCCSSSCEEECCSCTTC
T ss_pred EECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHhhcCCCCEEECCCCCCC
Confidence 9998854 3445555555555555555555555555555 4444433 24555555555544
No 5
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=2.2e-55 Score=526.05 Aligned_cols=510 Identities=21% Similarity=0.232 Sum_probs=411.7
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRL 177 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 177 (827)
.+|+.|+|++|++++..+..|.++++|++|||++|.+++..|..|+++++|++|||++|++++..+..+.++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 57999999999999988888999999999999999999999999999999999999999999877778999999999999
Q ss_pred CCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCc--CCccccEEEcccccc
Q 047196 178 DSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEIS--NLTILRKISLRNNKL 255 (827)
Q Consensus 178 ~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~Ls~N~l 255 (827)
++|.+++..|..+. .+++|++|++++|.+++..|..++++++|++|++++|.+++..|..+. .+++|++|++++|++
T Consensus 105 ~~n~l~~~~~~~~~-~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 105 MSNSIQKIKNNPFV-KQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CSSCCCCCCSCTTT-TCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCccCccChhHcc-ccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 99999854444444 456999999999999999999999999999999999999987776654 558899999999999
Q ss_pred cccccccccCc---------------------------CCCcEEEeecccCcccCchhhhcCCC--ccEEEecCCccccc
Q 047196 256 RGEIPHEIGYL---------------------------PNLENLVLGFNNLVGVVPAAIFNMST--VKKIYLLDNSLLGS 306 (827)
Q Consensus 256 ~~~~p~~~~~l---------------------------~~L~~L~Ls~N~l~~~~p~~~~~l~~--L~~L~l~~n~l~~~ 306 (827)
++..|..+..+ ++|++|++++|.+++..|..+.+++. |+.|++++|.+.+.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~ 263 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNNLNVV 263 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSCCCEE
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCCcCcc
Confidence 88877766544 45677777777777777777777654 88888888887766
Q ss_pred cChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceee-----cCC-------------CccCCCCCCc
Q 047196 307 FSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGI-----IPN-------------TIGLTGNPLD 368 (827)
Q Consensus 307 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~-----~p~-------------~~~l~~n~l~ 368 (827)
.+..+. .+++|++|++++|++++..|..+.++++|+.|++++|...+. +|. .+.+++|.+.
T Consensus 264 ~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~ 342 (680)
T 1ziw_A 264 GNDSFA-WLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSISLASLPKIDDFSFQWLKCLEHLNMEDNDIP 342 (680)
T ss_dssp CTTTTT-TCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC------CCEECTTTTTTCTTCCEEECCSCCBC
T ss_pred Cccccc-CcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhcccccccccccChhhcccCCCCCEEECCCCccC
Confidence 655544 677888888888888777776666666666666655433321 110 1124444444
Q ss_pred ccCCCchhccc---------------------------ccccEEEccCCcCccccCccccCCCCCceEeccCcccccccc
Q 047196 369 GVLPTSIGNLS---------------------------MSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIP 421 (827)
Q Consensus 369 g~~p~~~~~~~---------------------------~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p 421 (827)
+..|..+..++ .+|+.|++++|++++..|..|..+++|+.|++++|++++.+|
T Consensus 343 ~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~ 422 (680)
T 1ziw_A 343 GIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNKISKIESDAFSWLGHLEVLDLGLNEIGQELT 422 (680)
T ss_dssp CCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCEEECC
T ss_pred CCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCCCCeEChhhhhCCCCCCEEeCCCCcCccccC
Confidence 43333332221 257777777888888888888888999999999999887665
Q ss_pred -ccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCccc--ccCCccccCCCCCCccccCCCcccccCCccccc
Q 047196 422 -VTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFS--GSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWN 498 (827)
Q Consensus 422 -~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 498 (827)
..|.++++|++|++++|++.+..+..+..+++|+.|++++|.++ +.+|..+.++++|++|++++|++++..|..|.+
T Consensus 423 ~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~ 502 (680)
T 1ziw_A 423 GQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEG 502 (680)
T ss_dssp SGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred cccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhcc
Confidence 67888899999999999988888888888999999999999887 578889999999999999999999988888999
Q ss_pred cccccccCCCCCCCCCCCc--------ccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCCC--
Q 047196 499 LKDILFFDLSSNSLDGPLS--------LDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF-- 568 (827)
Q Consensus 499 l~~L~~LdLs~N~l~g~~p--------~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~-- 568 (827)
+++|+.|+|++|++++..+ ..+++++.|+.|++++|+++...+..|+++++|+.|+|++|++++..+..|
T Consensus 503 l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~ 582 (680)
T 1ziw_A 503 LEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNTLPASVFNN 582 (680)
T ss_dssp CTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTT
T ss_pred ccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCcCCHhHhCC
Confidence 9999999999999986422 347889999999999999995444579999999999999999998777655
Q ss_pred -cCCceEeCcCCcCeecCCCC-C-CCCCCcccccccCccccCCC
Q 047196 569 -GYLTELNLSFNKLEGEIPRG-G-PFANFTAKSFMGNEKLCGLP 609 (827)
Q Consensus 569 -~~L~~L~ls~N~l~g~ip~~-~-~~~~~~~~~~~~n~~lc~~p 609 (827)
.+|+.|++++|++++..|.. + .+.++....+.|||..|.++
T Consensus 583 l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~ 626 (680)
T 1ziw_A 583 QVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCE 626 (680)
T ss_dssp CTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCC
T ss_pred CCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCc
Confidence 47999999999999876642 1 35667778889999999864
No 6
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.1e-55 Score=516.70 Aligned_cols=490 Identities=19% Similarity=0.191 Sum_probs=368.8
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRL 177 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 177 (827)
..++.|||++|.+++..|.+|.++++|++|+|++|++++..|.+|.++++|++|+|++|++++..|..+.++++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 47999999999999998999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCcccc--EEEcccccc
Q 047196 178 DSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILR--KISLRNNKL 255 (827)
Q Consensus 178 ~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~--~L~Ls~N~l 255 (827)
++|.+++..|..+. .+++|++|++++|.+++..+..+..+++|++|++++|.+++..|..++.+++|+ .|++++|.+
T Consensus 113 ~~n~i~~l~~~~~~-~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 113 IQTGISSIDFIPLH-NQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp TTSCCSCGGGSCCT-TCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred cccCcccCCcchhc-cCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 99999964344444 456999999999999985545555699999999999999998888899999999 899999999
Q ss_pred cccccccccCcCCCcEEEeecccCc--------------------------ccCchhhhcCC--CccEEEecCCcccccc
Q 047196 256 RGEIPHEIGYLPNLENLVLGFNNLV--------------------------GVVPAAIFNMS--TVKKIYLLDNSLLGSF 307 (827)
Q Consensus 256 ~~~~p~~~~~l~~L~~L~Ls~N~l~--------------------------~~~p~~~~~l~--~L~~L~l~~n~l~~~~ 307 (827)
++..|..+.. .+|++|++++|... ...+..+..+. +++.|++++|.+.+..
T Consensus 192 ~~~~~~~~~~-~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l~~~~L~~L~l~~n~l~~~~ 270 (606)
T 3t6q_A 192 AGIEPGAFDS-AVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGLCEMSVESINLQKHYFFNIS 270 (606)
T ss_dssp CEECTTTTTT-CEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGGGGSEEEEEECTTCCCSSCC
T ss_pred CccChhHhhh-ccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchhhcCceeEEEeecCccCccC
Confidence 9877776654 57888888776411 01111222222 6788888888876654
Q ss_pred ChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEc
Q 047196 308 SLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYI 387 (827)
Q Consensus 308 ~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~L 387 (827)
+..+. .+++|++|++++|+++ .+|..+..+++|++|++++|.+++..|. .+..++ +|++|++
T Consensus 271 ~~~~~-~l~~L~~L~l~~n~l~-~lp~~l~~l~~L~~L~l~~n~l~~~~~~---------------~~~~l~-~L~~L~l 332 (606)
T 3t6q_A 271 SNTFH-CFSGLQELDLTATHLS-ELPSGLVGLSTLKKLVLSANKFENLCQI---------------SASNFP-SLTHLSI 332 (606)
T ss_dssp TTTTT-TCTTCSEEECTTSCCS-CCCSSCCSCTTCCEEECTTCCCSBGGGG---------------CGGGCT-TCSEEEC
T ss_pred HHHhc-cccCCCEEeccCCccC-CCChhhcccccCCEEECccCCcCcCchh---------------hhhccC-cCCEEEC
Confidence 44343 7788888888888887 6777788888888888888887755442 333443 6777777
Q ss_pred cCCcCccccCc-cccCCCCCceEeccCccccccc--cccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcc
Q 047196 388 SNCNIGGSIPQ-LISNLSNLLLLDLEGNKLTGSI--PVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKF 464 (827)
Q Consensus 388 s~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 464 (827)
++|.+.+.+|. .+..+++|+.|++++|++++.. |..+..+++|++|++++|++.+..|..+..+++|+.|++++|++
T Consensus 333 ~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 412 (606)
T 3t6q_A 333 KGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRL 412 (606)
T ss_dssp CSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCE
T ss_pred CCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcC
Confidence 77777765554 3677777777777777777655 56677777777777777777766677777777777777777777
Q ss_pred cccCCcc-ccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCC---CCcccccccccCceEEcccceeeecc
Q 047196 465 SGSIPSC-LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDG---PLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 465 ~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g---~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
++..|.. +..+++|++|++++|.+++..|..+..+++|+.|++++|.+++ ..+..++.++.|+.|++++|++++.+
T Consensus 413 ~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~ 492 (606)
T 3t6q_A 413 KVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSID 492 (606)
T ss_dssp ECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEEC
T ss_pred CCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccC
Confidence 7665543 6677777777777777777777777777777777777777766 22345677777777777777777777
Q ss_pred cccccCCCCCCEEECCCCcceeecCCCCc---CCceEeCcCCcCeecCCCC-CCCCCCcccccccCccccCC
Q 047196 541 PSTIGDLKDLQNISLACNGLEGLIPESFG---YLTELNLSFNKLEGEIPRG-GPFANFTAKSFMGNEKLCGL 608 (827)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~---~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lc~~ 608 (827)
|..|+++++|+.|+|++|++++.+|..+. .| .||+++|++++.+|.. ..+..+....+.||+..|.+
T Consensus 493 ~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 563 (606)
T 3t6q_A 493 QHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTC 563 (606)
T ss_dssp TTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSG
T ss_pred hhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccC
Confidence 77777777777777777777777776654 44 6777777777655542 23344555666777766653
No 7
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=100.00 E-value=4.1e-54 Score=508.12 Aligned_cols=483 Identities=22% Similarity=0.224 Sum_probs=413.3
Q ss_pred EEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCC
Q 047196 103 LNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKL 182 (827)
Q Consensus 103 L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l 182 (827)
++.++.+++ .+|..+.. .+++|||++|.+++..|..|.++++|++|||++|++++..|..|.++++|++|+|++|.+
T Consensus 17 ~~c~~~~l~-~iP~~l~~--~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l 93 (606)
T 3t6q_A 17 YNCENLGLN-EIPGTLPN--STECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPL 93 (606)
T ss_dssp EECTTSCCS-SCCTTSCT--TCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EECCCCCcc-cCcCCCCC--cCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcc
Confidence 444555555 45655543 789999999999999899999999999999999999999999999999999999999999
Q ss_pred CCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEccccccccccccc
Q 047196 183 SGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHE 262 (827)
Q Consensus 183 ~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 262 (827)
++..|..+.. +++|++|++++|.+++..|..++++++|++|++++|.+++..+..+..+++|++|++++|++++..|..
T Consensus 94 ~~~~~~~~~~-l~~L~~L~L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 172 (606)
T 3t6q_A 94 IFMAETALSG-PKALKHLFFIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKED 172 (606)
T ss_dssp SEECTTTTSS-CTTCCEEECTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHH
T ss_pred cccChhhhcc-cccccEeeccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhh
Confidence 9766666555 559999999999999888889999999999999999999855445556999999999999999888999
Q ss_pred ccCcCCCc--EEEeecccCcccCchhhhcCCCccEEEecCCcccc-------------------------ccChhhhcCC
Q 047196 263 IGYLPNLE--NLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLG-------------------------SFSLGIDLSL 315 (827)
Q Consensus 263 ~~~l~~L~--~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~-------------------------~~~~~~~~~l 315 (827)
++.+++|+ +|++++|.+++..|..+. ..+|+.|++++|.... .++...+..+
T Consensus 173 ~~~l~~L~~l~L~l~~n~l~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~l~~~~l~~l~~~~~~~~~~~~i~~~~~~~l 251 (606)
T 3t6q_A 173 MSSLQQATNLSLNLNGNDIAGIEPGAFD-SAVFQSLNFGGTQNLLVIFKGLKNSTIQSLWLGTFEDMDDEDISPAVFEGL 251 (606)
T ss_dssp HHTTTTCCSEEEECTTCCCCEECTTTTT-TCEEEEEECTTCSCHHHHHHHTTTCEEEEEECCCCTTSCCCCCCGGGGGGG
T ss_pred hhhhcccceeEEecCCCccCccChhHhh-hccccccccCCchhHHHHhhhccccchhheechhhccccccccChhHhchh
Confidence 99999999 999999999998877654 4689999998875211 1111111111
Q ss_pred --CCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCc
Q 047196 316 --PNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIG 393 (827)
Q Consensus 316 --~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~ 393 (827)
.+|+.|++++|++++..+..+..+++|++|++++|+++. +|..+..++ +|++|++++|+++
T Consensus 252 ~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~----------------lp~~l~~l~-~L~~L~l~~n~l~ 314 (606)
T 3t6q_A 252 CEMSVESINLQKHYFFNISSNTFHCFSGLQELDLTATHLSE----------------LPSGLVGLS-TLKKLVLSANKFE 314 (606)
T ss_dssp GGSEEEEEECTTCCCSSCCTTTTTTCTTCSEEECTTSCCSC----------------CCSSCCSCT-TCCEEECTTCCCS
T ss_pred hcCceeEEEeecCccCccCHHHhccccCCCEEeccCCccCC----------------CChhhcccc-cCCEEECccCCcC
Confidence 278999999999999888889999999999999999872 344455555 8999999999999
Q ss_pred cccCccccCCCCCceEeccCcccccccccc-ccCCCCCcEEECCCCCCCCCC--CccccccccccEEecCCCcccccCCc
Q 047196 394 GSIPQLISNLSNLLLLDLEGNKLTGSIPVT-FGRLQKLQGLYLPFNKLAGSI--PDQLCHLARLNTLGLAGNKFSGSIPS 470 (827)
Q Consensus 394 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l~~~~p~ 470 (827)
+..|..+..+++|+.|++++|.+.+.+|.. +..+++|++|++++|.+.+.. |..+..+++|++|++++|++++..|.
T Consensus 315 ~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~ 394 (606)
T 3t6q_A 315 NLCQISASNFPSLTHLSIKGNTKRLELGTGCLENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTE 394 (606)
T ss_dssp BGGGGCGGGCTTCSEEECCSCSSCCBCCSSTTTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTT
T ss_pred cCchhhhhccCcCCEEECCCCCcccccchhhhhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHH
Confidence 998999999999999999999999877664 899999999999999999776 78899999999999999999999999
Q ss_pred cccCCCCCCccccCCCcccccCCcc-ccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeec---ccccccC
Q 047196 471 CLGNLTSLRSPDLGSNRLTSVLPST-FWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGD---IPSTIGD 546 (827)
Q Consensus 471 ~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~---ip~~~~~ 546 (827)
.+..+++|++|++++|.+++..|.. +..+++|+.|++++|.+++..|..++.++.|+.|++++|++++. .+..+..
T Consensus 395 ~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~ 474 (606)
T 3t6q_A 395 AFKECPQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQT 474 (606)
T ss_dssp TTTTCTTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGG
T ss_pred HhcCCccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhcc
Confidence 9999999999999999999887654 89999999999999999999999999999999999999999873 3367999
Q ss_pred CCCCCEEECCCCcceeecCCCCc---CCceEeCcCCcCeecCCCC-CCCCCCcccccccCccccCCC
Q 047196 547 LKDLQNISLACNGLEGLIPESFG---YLTELNLSFNKLEGEIPRG-GPFANFTAKSFMGNEKLCGLP 609 (827)
Q Consensus 547 l~~L~~L~Ls~N~l~g~ip~~~~---~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lc~~p 609 (827)
+++|+.|++++|++++.+|..|+ +|+.|++++|++++.+|.. ..+..+ ...+.+|. +.+.+
T Consensus 475 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~L-~L~L~~N~-l~~~~ 539 (606)
T 3t6q_A 475 LGRLEILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIEALSHLKGI-YLNLASNH-ISIIL 539 (606)
T ss_dssp CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGGGGTTCCSC-EEECCSSC-CCCCC
T ss_pred CCCccEEECCCCccCccChhhhccccCCCEEECCCCccCcCChhHhCccccc-EEECcCCc-ccccC
Confidence 99999999999999999998765 7899999999999988753 234444 44555553 33443
No 8
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=100.00 E-value=7.9e-53 Score=503.97 Aligned_cols=489 Identities=22% Similarity=0.229 Sum_probs=425.1
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRL 177 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 177 (827)
.+++.|+|++|.+++..+.+|+++++|++|+|++|++++..|..|+++++|++|||++|.+++..|..+.++++|++|++
T Consensus 73 ~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 152 (680)
T 1ziw_A 73 PMLKVLNLQHNELSQLSDKTFAFCTNLTELHLMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLL 152 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEEC
T ss_pred cCcCEEECCCCccCccChhhhccCCCCCEEECCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEc
Confidence 46888999999888766667999999999999999998777788999999999999999999888888889999999999
Q ss_pred CCCCCCCCcchhHhh-ccccccEEEeecccccccCCccCCCC---------------------------CCCcEEEccCC
Q 047196 178 DSDKLSGELPVNICN-YLHYLKVLFLAKNMFHGQIPLALSKC---------------------------KRLQLLNLGFK 229 (827)
Q Consensus 178 ~~n~l~g~ip~~~~~-~~~~L~~L~Ls~N~l~~~~p~~l~~l---------------------------~~L~~L~L~~n 229 (827)
+.|.+++..|..+.. ..++|++|++++|.+++..|..+..+ ++|+.|++++|
T Consensus 153 ~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n 232 (680)
T 1ziw_A 153 SNNKIQALKSEELDIFANSSLKKLELSSNQIKEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNS 232 (680)
T ss_dssp CSSCCCCBCHHHHGGGTTCEESEEECTTCCCCCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTS
T ss_pred cCCcccccCHHHhhccccccccEEECCCCcccccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCC
Confidence 999998766655432 23589999999999998888766544 56788888999
Q ss_pred CCcccCCCcCcCCcc--ccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccc-
Q 047196 230 KLSGAIPKEISNLTI--LRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGS- 306 (827)
Q Consensus 230 ~l~~~~p~~~~~l~~--L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~- 306 (827)
.+++..|..+.+++. |++|++++|++++..|..|+.+++|++|+|++|++++..|..+.++++|+.|++++|...+.
T Consensus 233 ~l~~~~~~~~~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~~~~~~~~ 312 (680)
T 1ziw_A 233 QLSTTSNTTFLGLKWTNLTMLDLSYNNLNVVGNDSFAWLPQLEYFFLEYNNIQHLFSHSLHGLFNVRYLNLKRSFTKQSI 312 (680)
T ss_dssp CCCEECTTTTGGGGGSCCCEEECTTSCCCEECTTTTTTCTTCCEEECCSCCBSEECTTTTTTCTTCCEEECTTCBCCC--
T ss_pred cccccChhHhhccCcCCCCEEECCCCCcCccCcccccCcccccEeeCCCCccCccChhhhcCCCCccEEeccchhhhccc
Confidence 999988999988866 99999999999988889999999999999999999999999999999999999998765542
Q ss_pred ----cCh---hhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeec-C------------CCccCCCCC
Q 047196 307 ----FSL---GIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGII-P------------NTIGLTGNP 366 (827)
Q Consensus 307 ----~~~---~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~-p------------~~~~l~~n~ 366 (827)
+|. ..+..+++|++|++++|++++..|..+.++++|++|++++|.+++.. + ..+.+++|.
T Consensus 313 ~~~~lp~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~~~~~~l~~~~f~~~~~~~L~~L~L~~n~ 392 (680)
T 1ziw_A 313 SLASLPKIDDFSFQWLKCLEHLNMEDNDIPGIKSNMFTGLINLKYLSLSNSFTSLRTLTNETFVSLAHSPLHILNLTKNK 392 (680)
T ss_dssp ----CCEECTTTTTTCTTCCEEECCSCCBCCCCTTTTTTCTTCCEEECTTCBSCCCEECTTTTGGGTTSCCCEEECTTSC
T ss_pred ccccccccChhhcccCCCCCEEECCCCccCCCChhHhccccCCcEEECCCCchhhhhcchhhhcccccCcCceEECCCCC
Confidence 221 12337899999999999999999999999999999999999865322 1 123478899
Q ss_pred CcccCCCchhcccccccEEEccCCcCccccC-ccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCC--CC
Q 047196 367 LDGVLPTSIGNLSMSLENIYISNCNIGGSIP-QLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLA--GS 443 (827)
Q Consensus 367 l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~--g~ 443 (827)
+++..|..+..+. +|++|++++|.+++.+| ..|.++++|+.|++++|++++..+..|..+++|+.|++++|.+. +.
T Consensus 393 l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~ 471 (680)
T 1ziw_A 393 ISKIESDAFSWLG-HLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDS 471 (680)
T ss_dssp CCEECTTTTTTCT-TCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTC
T ss_pred CCeEChhhhhCCC-CCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhcccccccccc
Confidence 9998898888887 89999999999998776 68999999999999999999999999999999999999999987 67
Q ss_pred CCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCC--------ccccccccccccCCCCCCCCCC
Q 047196 444 IPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLP--------STFWNLKDILFFDLSSNSLDGP 515 (827)
Q Consensus 444 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p--------~~~~~l~~L~~LdLs~N~l~g~ 515 (827)
+|..+.++++|+.|++++|++++..|..+.++++|++|++++|.+++..+ ..+.++++|+.|+|++|+++..
T Consensus 472 ~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i 551 (680)
T 1ziw_A 472 SPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEI 551 (680)
T ss_dssp SSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCC
T ss_pred CCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCC
Confidence 89999999999999999999998888889999999999999999987532 2478899999999999999965
Q ss_pred CcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCC----CcCCceEeCcCCcCeecCCC
Q 047196 516 LSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPES----FGYLTELNLSFNKLEGEIPR 587 (827)
Q Consensus 516 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~----~~~L~~L~ls~N~l~g~ip~ 587 (827)
.+..+++++.|+.|++++|++++..+..|.++++|+.|+|++|++++.+|.. +.+|+.+++++|.+.+..+.
T Consensus 552 ~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 552 PVEVFKDLFELKIIDLGLNNLNTLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred CHHHcccccCcceeECCCCCCCcCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 5567999999999999999999877778899999999999999999988864 56899999999999887653
No 9
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=1.2e-53 Score=504.01 Aligned_cols=483 Identities=19% Similarity=0.174 Sum_probs=389.9
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRL 177 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 177 (827)
.+++.|+|++|.+++..+..|.++++|++|||++|++++..|.+|.++++|++|||++|.+++..|..+.++++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 57999999999999998889999999999999999999988999999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhHhhccccccEEEeecccccc-cCCccCCCCCCCcEEEccCCCCcccCCCcCcCCcccc----EEEccc
Q 047196 178 DSDKLSGELPVNICNYLHYLKVLFLAKNMFHG-QIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILR----KISLRN 252 (827)
Q Consensus 178 ~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~Ls~ 252 (827)
++|.+++..|..+.. +++|++|++++|.+++ .+|..++++++|++|++++|.+++..|..++.+++|+ +|++++
T Consensus 112 ~~n~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~ 190 (606)
T 3vq2_A 112 VETKLASLESFPIGQ-LITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSL 190 (606)
T ss_dssp TTSCCCCSSSSCCTT-CTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTT
T ss_pred cCCccccccccccCC-CCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCCcceecChhhhhhhhccccccceeeccC
Confidence 999998655455544 5599999999999986 6799999999999999999999999999898888776 899999
Q ss_pred ccccccccccccCcCCCcEEEeecccCc-ccCchhhhcCCCccEEEe---------------------------------
Q 047196 253 NKLRGEIPHEIGYLPNLENLVLGFNNLV-GVVPAAIFNMSTVKKIYL--------------------------------- 298 (827)
Q Consensus 253 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~l--------------------------------- 298 (827)
|.+++..+..+.. .+|++|++++|.++ +.+|..+.+++.++.+++
T Consensus 191 n~l~~~~~~~~~~-~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 269 (606)
T 3vq2_A 191 NPIDFIQDQAFQG-IKLHELTLRGNFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLT 269 (606)
T ss_dssp CCCCEECTTTTTT-CEEEEEEEESCCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEEC
T ss_pred CCcceeCcccccC-ceeeeeeccCCccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheecc
Confidence 9999665555554 48999999999987 456777888888887776
Q ss_pred cCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcc
Q 047196 299 LDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNL 378 (827)
Q Consensus 299 ~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~ 378 (827)
..|.+.+.+|. + ..+++|+.|++++|.+.. +| .+..+++|+.|++++|.+ +. +|. + .+
T Consensus 270 ~~~~~~~~~~~-~-~~l~~L~~L~l~~~~~~~-l~-~l~~~~~L~~L~l~~n~l-~~---------------lp~-~-~l 327 (606)
T 3vq2_A 270 YTNDFSDDIVK-F-HCLANVSAMSLAGVSIKY-LE-DVPKHFKWQSLSIIRCQL-KQ---------------FPT-L-DL 327 (606)
T ss_dssp CCTTCCGGGGS-C-GGGTTCSEEEEESCCCCC-CC-CCCTTCCCSEEEEESCCC-SS---------------CCC-C-CC
T ss_pred ccccccccccc-c-ccCCCCCEEEecCccchh-hh-hccccccCCEEEcccccC-cc---------------ccc-C-CC
Confidence 34444444443 2 255667777777776643 44 566666777777776666 33 332 2 33
Q ss_pred cccccEEEccCCcCccccCccccCCCCCceEeccCcccccc--ccccccCCCCCcEEECCCCCCCCCCCccccccccccE
Q 047196 379 SMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGS--IPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNT 456 (827)
Q Consensus 379 ~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 456 (827)
+ +|++|++++|...+.+ .+..+++|+.|++++|++++. +|..+..+++|++|++++|.+.+ +|..+..+++|+.
T Consensus 328 ~-~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~ 403 (606)
T 3vq2_A 328 P-FLKSLTLTMNKGSISF--KKVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQH 403 (606)
T ss_dssp S-SCCEEEEESCSSCEEC--CCCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCE
T ss_pred C-ccceeeccCCcCccch--hhccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCe
Confidence 3 7888888888665544 566788888888888888876 37778888888888888888874 6677888888888
Q ss_pred EecCCCcccccCC-ccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCC-CCcccccccccCceEEcccc
Q 047196 457 LGLAGNKFSGSIP-SCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDG-PLSLDIGNLRVVIGINLSRN 534 (827)
Q Consensus 457 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g-~~p~~~~~l~~L~~L~Ls~N 534 (827)
|++++|++++..| ..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+++ .+|..++.++.|+.|++++|
T Consensus 404 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n 483 (606)
T 3vq2_A 404 LDFQHSTLKRVTEFSAFLSLEKLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKC 483 (606)
T ss_dssp EECTTSEEESTTTTTTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred eECCCCccCCccChhhhhccccCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCC
Confidence 8888888887777 678888888888888888888888888888888888888888887 46888888888888888888
Q ss_pred eeeecccccccCCCCCCEEECCCCcceeecCCCCc---CCceEeCcCCcCeecCCCC-CCCC-CCcccccccCccccCCC
Q 047196 535 NFSGDIPSTIGDLKDLQNISLACNGLEGLIPESFG---YLTELNLSFNKLEGEIPRG-GPFA-NFTAKSFMGNEKLCGLP 609 (827)
Q Consensus 535 ~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~---~L~~L~ls~N~l~g~ip~~-~~~~-~~~~~~~~~n~~lc~~p 609 (827)
++++.+|..++++++|+.|+|++|++++.+|..++ +|+.||+++|+++ .+|.. ..+. ++....+.+|+..|.++
T Consensus 484 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~l~-~~p~~~~~l~~~L~~l~l~~N~~~c~c~ 562 (606)
T 3vq2_A 484 QLEQISWGVFDTLHRLQLLNMSHNNLLFLDSSHYNQLYSLSTLDCSFNRIE-TSKGILQHFPKSLAFFNLTNNSVACICE 562 (606)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCEEGGGTTTCTTCCEEECTTSCCC-CEESCGGGSCTTCCEEECCSCCCCCSST
T ss_pred cCCccChhhhcccccCCEEECCCCcCCCcCHHHccCCCcCCEEECCCCcCc-ccCHhHhhhcccCcEEEccCCCcccCCc
Confidence 88888888888888888888888888888887664 6788888888888 56654 2222 35556677888887653
No 10
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=9.1e-54 Score=522.69 Aligned_cols=509 Identities=20% Similarity=0.179 Sum_probs=360.4
Q ss_pred CcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccC-ChhhhhccccceEEecCCCCCCcccc
Q 047196 86 CNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDI-PPSIFTMHKLKFLDFSDNQLSGSLSS 164 (827)
Q Consensus 86 C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~LdLs~N~l~g~~p~ 164 (827)
|+|..|-+ ...+++.|||++|.+++..+.+|.++++|++|||++|.+.+.+ |.+|.++++|++|+|++|.+++..|.
T Consensus 14 ~~L~~vP~--lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~ 91 (844)
T 3j0a_A 14 CNLTQVPQ--VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPD 91 (844)
T ss_dssp CCSSCCCS--SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTT
T ss_pred CCCCCCCC--CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHh
Confidence 67888888 3468999999999999999999999999999999999777666 78899999999999999999999999
Q ss_pred ccCCCCCCcEEEcCCCCCCCCcchh-HhhccccccEEEeecccccccCC-ccCCCCCCCcEEEccCCCCcccCCCcCcCC
Q 047196 165 VTFNLSSVLDIRLDSDKLSGELPVN-ICNYLHYLKVLFLAKNMFHGQIP-LALSKCKRLQLLNLGFKKLSGAIPKEISNL 242 (827)
Q Consensus 165 ~~~~l~~L~~L~L~~n~l~g~ip~~-~~~~~~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 242 (827)
.+.++++|++|+|++|.+++.+|.. .+..+++|++|+|++|.+++..+ ..|+++++|++|++++|.+++..|..+..+
T Consensus 92 ~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l 171 (844)
T 3j0a_A 92 AFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPL 171 (844)
T ss_dssp SSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHH
T ss_pred HccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccc
Confidence 9999999999999999999877765 34456699999999999998765 579999999999999999999999999888
Q ss_pred --ccccEEEcccccccccccccccCcCC------CcEEEeecccCcccCchhhhcC---CCccEEEecCCcccc------
Q 047196 243 --TILRKISLRNNKLRGEIPHEIGYLPN------LENLVLGFNNLVGVVPAAIFNM---STVKKIYLLDNSLLG------ 305 (827)
Q Consensus 243 --~~L~~L~Ls~N~l~~~~p~~~~~l~~------L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~n~l~~------ 305 (827)
++|+.|++++|.+.+..|..++.+++ |++|++++|.+++.+|..+... .+++.+.+..+....
T Consensus 172 ~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~ 251 (844)
T 3j0a_A 172 QGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLEILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHN 251 (844)
T ss_dssp HHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBSEEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSS
T ss_pred cCCccceEECCCCccccccccchhhcCCccccCceeEEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccc
Confidence 89999999999999999988887776 9999999999998888776643 456666665332211
Q ss_pred ---ccChhhh-cCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCcc---------CCCCCCcccCC
Q 047196 306 ---SFSLGID-LSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIG---------LTGNPLDGVLP 372 (827)
Q Consensus 306 ---~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~---------l~~n~l~g~~p 372 (827)
.....+. ...++|+.|++++|.+.+..|..+..+++|+.|++++|++++..|..+. +++|.+++..|
T Consensus 252 l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 331 (844)
T 3j0a_A 252 IKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYS 331 (844)
T ss_dssp STTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCS
T ss_pred cCCCChhhhhccccCCccEEECCCCcccccChhhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCH
Confidence 1111111 1135677777777777777777777777777777777777666553221 23333333333
Q ss_pred CchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccc
Q 047196 373 TSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLA 452 (827)
Q Consensus 373 ~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~ 452 (827)
..+..++ +|+.|++++|++++..+..|..+++|+.|+|++|.+++.. .+++|+.|++++|+++ .+|.. ..
T Consensus 332 ~~~~~l~-~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~i~-----~~~~L~~L~l~~N~l~-~l~~~---~~ 401 (844)
T 3j0a_A 332 SNFYGLP-KVAYIDLQKNHIAIIQDQTFKFLEKLQTLDLRDNALTTIH-----FIPSIPDIFLSGNKLV-TLPKI---NL 401 (844)
T ss_dssp CSCSSCT-TCCEEECCSCCCCCCCSSCSCSCCCCCEEEEETCCSCCCS-----SCCSCSEEEEESCCCC-CCCCC---CT
T ss_pred HHhcCCC-CCCEEECCCCCCCccChhhhcCCCCCCEEECCCCCCCccc-----CCCCcchhccCCCCcc-ccccc---cc
Confidence 3444443 4555555555555444445555555555555555554311 1444444444444444 23322 23
Q ss_pred cccEEecCCCcccccC-CccccCCCCCCccccCCCcccccCCc-cccccccccccCCCCCCCC-----CCCccccccccc
Q 047196 453 RLNTLGLAGNKFSGSI-PSCLGNLTSLRSPDLGSNRLTSVLPS-TFWNLKDILFFDLSSNSLD-----GPLSLDIGNLRV 525 (827)
Q Consensus 453 ~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~LdLs~N~l~-----g~~p~~~~~l~~ 525 (827)
+++.|++++|++++.- +..+.++++|++|+|++|++++..+. .+..+++|+.|+|++|.++ +..+..+.+++.
T Consensus 402 ~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~ 481 (844)
T 3j0a_A 402 TANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSH 481 (844)
T ss_dssp TCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCC
T ss_pred ccceeecccCccccCchhhhhhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCccc
Confidence 4455555555555321 12244667777777777777765443 3455677777777777776 334455667777
Q ss_pred CceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCCC-cCCceEeCcCCcCeecCCCCCCCCCCcccccccCcc
Q 047196 526 VIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF-GYLTELNLSFNKLEGEIPRGGPFANFTAKSFMGNEK 604 (827)
Q Consensus 526 L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~-~~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~ 604 (827)
|+.|+|++|+|++.+|..|..+++|+.|+|++|++++.+|..+ .+|+.||+++|+++|.+|. .|..+....+.||+.
T Consensus 482 L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~~L~~L~Ls~N~l~~~~~~--~~~~L~~l~l~~Np~ 559 (844)
T 3j0a_A 482 LQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTVLSHNDLPANLEILDISRNQLLAPNPD--VFVSLSVLDITHNKF 559 (844)
T ss_dssp EECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSSCCCCCCCSCCCEEEEEEECCCCCCSC--CCSSCCEEEEEEECC
T ss_pred ccEEECCCCcccccChhHccchhhhheeECCCCCCCccChhhhhccccEEECCCCcCCCCChh--HhCCcCEEEecCCCc
Confidence 7777777777777777777777777777777777777666555 3677777777777777764 355666666777777
Q ss_pred ccCC
Q 047196 605 LCGL 608 (827)
Q Consensus 605 lc~~ 608 (827)
.|.+
T Consensus 560 ~C~c 563 (844)
T 3j0a_A 560 ICEC 563 (844)
T ss_dssp CCSS
T ss_pred cccc
Confidence 7744
No 11
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=100.00 E-value=2.9e-51 Score=483.70 Aligned_cols=461 Identities=18% Similarity=0.146 Sum_probs=412.1
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRL 177 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 177 (827)
.+++.|+|++|.+++..|.+|.++++|++|+|++|.+++..|.+|+++++|++|+|++|.+++..+..+.++++|++|++
T Consensus 56 ~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 135 (606)
T 3vq2_A 56 SELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNV 135 (606)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEEC
T ss_pred ccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeC
Confidence 57999999999999999999999999999999999999998999999999999999999999988888999999999999
Q ss_pred CCCCCCC-CcchhHhhccccccEEEeecccccccCCccCCCCCCCc----EEEccCCCCcccCCCcCcCCccccEEEccc
Q 047196 178 DSDKLSG-ELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQ----LLNLGFKKLSGAIPKEISNLTILRKISLRN 252 (827)
Q Consensus 178 ~~n~l~g-~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~----~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 252 (827)
++|.+.+ .+|..+.++ ++|++|++++|.+++..|..++.+++|+ +|++++|.+++..+..+... +|++|++++
T Consensus 136 ~~n~l~~~~lp~~~~~l-~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~~~~~~~~~~~-~L~~L~L~~ 213 (606)
T 3vq2_A 136 AHNFIHSCKLPAYFSNL-TNLVHVDLSYNYIQTITVNDLQFLRENPQVNLSLDMSLNPIDFIQDQAFQGI-KLHELTLRG 213 (606)
T ss_dssp CSSCCCCCCCCGGGGTC-TTCCEEECCSSCCCEECTTTTHHHHHCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEES
T ss_pred CCCcccceechHhHhhc-CCCCEEEccCCcceecChhhhhhhhccccccceeeccCCCcceeCcccccCc-eeeeeeccC
Confidence 9999986 678887775 5999999999999999898888877665 89999999997777666655 899999999
Q ss_pred cccc-ccccccccCcCCCcEEEe---------------------------------ecccCcccCchhhhcCCCccEEEe
Q 047196 253 NKLR-GEIPHEIGYLPNLENLVL---------------------------------GFNNLVGVVPAAIFNMSTVKKIYL 298 (827)
Q Consensus 253 N~l~-~~~p~~~~~l~~L~~L~L---------------------------------s~N~l~~~~p~~~~~l~~L~~L~l 298 (827)
|.++ +..|..++++++|+.+++ ..|.+++.+|. +..+++|+.|++
T Consensus 214 n~~~~~~~~~~~~~l~~L~~l~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~-~~~l~~L~~L~l 292 (606)
T 3vq2_A 214 NFNSSNIMKTCLQNLAGLHVHRLILGEFKDERNLEIFEPSIMEGLCDVTIDEFRLTYTNDFSDDIVK-FHCLANVSAMSL 292 (606)
T ss_dssp CCSCHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCGGGGTTGGGSEEEEEEECCCTTCCGGGGS-CGGGTTCSEEEE
T ss_pred CccchhHHHHHhccccccccccccccccccCCcccccChHHhhhhhhccHhheeccccccccccccc-cccCCCCCEEEe
Confidence 9987 466778888888887776 66777777777 889999999999
Q ss_pred cCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcc
Q 047196 299 LDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNL 378 (827)
Q Consensus 299 ~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~ 378 (827)
++|.+. .+| .+. .+++|+.|++++|++ +.+|. + .+++|+.|++++|...+.++ +..+
T Consensus 293 ~~~~~~-~l~-~l~-~~~~L~~L~l~~n~l-~~lp~-~-~l~~L~~L~l~~n~~~~~~~-----------------~~~l 349 (606)
T 3vq2_A 293 AGVSIK-YLE-DVP-KHFKWQSLSIIRCQL-KQFPT-L-DLPFLKSLTLTMNKGSISFK-----------------KVAL 349 (606)
T ss_dssp ESCCCC-CCC-CCC-TTCCCSEEEEESCCC-SSCCC-C-CCSSCCEEEEESCSSCEECC-----------------CCCC
T ss_pred cCccch-hhh-hcc-ccccCCEEEcccccC-ccccc-C-CCCccceeeccCCcCccchh-----------------hccC
Confidence 999985 455 333 788999999999999 78884 4 99999999999996654432 2233
Q ss_pred cccccEEEccCCcCccc--cCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCC-cccccccccc
Q 047196 379 SMSLENIYISNCNIGGS--IPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIP-DQLCHLARLN 455 (827)
Q Consensus 379 ~~~L~~L~Ls~N~l~g~--~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~ 455 (827)
+ +|++|++++|++++. +|..+..+++|+.|++++|.+++ +|..+..+++|+.|++++|++.+..| ..+.++++|+
T Consensus 350 ~-~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~ 427 (606)
T 3vq2_A 350 P-SLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLEKLL 427 (606)
T ss_dssp T-TCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCTTCC
T ss_pred C-CCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccccCC
Confidence 3 899999999999976 48899999999999999999986 66889999999999999999998888 6899999999
Q ss_pred EEecCCCcccccCCccccCCCCCCccccCCCcccc-cCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccc
Q 047196 456 TLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTS-VLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRN 534 (827)
Q Consensus 456 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N 534 (827)
.|++++|++++..|..+..+++|++|++++|.+++ .+|..+..+++|+.|+|++|++++.+|..++.++.|+.|++++|
T Consensus 428 ~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 507 (606)
T 3vq2_A 428 YLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMSHN 507 (606)
T ss_dssp EEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECCCC
Confidence 99999999999999999999999999999999998 57999999999999999999999999999999999999999999
Q ss_pred eeeecccccccCCCCCCEEECCCCcceeecCCCCc----CCceEeCcCCcCeecCCC
Q 047196 535 NFSGDIPSTIGDLKDLQNISLACNGLEGLIPESFG----YLTELNLSFNKLEGEIPR 587 (827)
Q Consensus 535 ~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~----~L~~L~ls~N~l~g~ip~ 587 (827)
++++.+|..++++++|+.|||++|+++. +|..+. +|+.|++++|++.+..+.
T Consensus 508 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~~ 563 (606)
T 3vq2_A 508 NLLFLDSSHYNQLYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICEH 563 (606)
T ss_dssp CCSCEEGGGTTTCTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSSTT
T ss_pred cCCCcCHHHccCCCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCcc
Confidence 9999999999999999999999999994 565443 599999999999986664
No 12
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=2.2e-50 Score=470.47 Aligned_cols=478 Identities=20% Similarity=0.206 Sum_probs=306.3
Q ss_pred CCcccceecCCCC-----------CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEe
Q 047196 85 VCNWIGITCNVNS-----------HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDF 153 (827)
Q Consensus 85 ~C~W~gv~C~~~~-----------~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdL 153 (827)
.|.|.|| |+... .+++.|+|++|.+++..|.+|.++++|++|+|++|++++..|.+|.++++|++|||
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4899998 86431 24555566665555555555555666666666666555555555555566666666
Q ss_pred cCCCCCCccccccCCCCCCcEEEcCCCCCCC-CcchhHhhccccccEEEeecccccccCC-ccCCCCCCCcEEEccCCCC
Q 047196 154 SDNQLSGSLSSVTFNLSSVLDIRLDSDKLSG-ELPVNICNYLHYLKVLFLAKNMFHGQIP-LALSKCKRLQLLNLGFKKL 231 (827)
Q Consensus 154 s~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g-~ip~~~~~~~~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~n~l 231 (827)
++|++++..|..+.++++|++|++++|.+++ .+|..+.. +++|++|++++|.+.+.+| ..+.++++|++|++++|.+
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~-l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l 160 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPN-LTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSL 160 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTT-CTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhc-cCCccEEECCCCccccccCHhhhhcccccCeeeccCCcc
Confidence 6666555555555555555555555555553 23333322 3355555555555333333 3555555555555555555
Q ss_pred cccCCCcCcCCccccEEEccccccccccccc-ccCcCCCcEEEeecccCcccC--ch-hhhcCCCccEEEecCCcccccc
Q 047196 232 SGAIPKEISNLTILRKISLRNNKLRGEIPHE-IGYLPNLENLVLGFNNLVGVV--PA-AIFNMSTVKKIYLLDNSLLGSF 307 (827)
Q Consensus 232 ~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~--p~-~~~~l~~L~~L~l~~n~l~~~~ 307 (827)
++.+|..++++++|++|++++|.+. .+|.. +..+++|++|++++|++++.. |. ....+++|+.|++++|.+.+..
T Consensus 161 ~~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~ 239 (549)
T 2z81_A 161 RNYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSVLTDES 239 (549)
T ss_dssp CEECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCEEEHHH
T ss_pred cccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccccchhH
Confidence 5555555555555555555555554 23332 234555555555555555431 11 1123445555555555554433
Q ss_pred Chhhh---cCCCCccEEeCcCCcccccc------CccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcc
Q 047196 308 SLGID---LSLPNVERLNLGLNRFSGTI------PSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNL 378 (827)
Q Consensus 308 ~~~~~---~~l~~L~~L~L~~N~l~~~~------p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~ 378 (827)
+..+. ..+++|+.+++++|.+.+.. ...+..+.+|+.|++.++.+..... ...++... ..
T Consensus 240 ~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~~l~~L~~L~l~~~~i~~~~~----------~~~l~~~~-~~ 308 (549)
T 2z81_A 240 FNELLKLLRYILELSEVEFDDCTLNGLGDFNPSESDVVSELGKVETVTIRRLHIPQFYL----------FYDLSTVY-SL 308 (549)
T ss_dssp HHHHHGGGGGCTTCCEEEEESCEEECCSCCCCCTTTCCCCCTTCCEEEEESCBCSCGGG----------SCCCCHHH-HH
T ss_pred HHHHHHHhhhhccccccccccccccccccccccchhhhhhhcccccccccccccchhhh----------cccchhhh-hh
Confidence 32221 13445555555555554421 1123344555555555554322100 00111111 22
Q ss_pred cccccEEEccCCcCccccCccc-cCCCCCceEeccCccccccccc---cccCCCCCcEEECCCCCCCCCCC--ccccccc
Q 047196 379 SMSLENIYISNCNIGGSIPQLI-SNLSNLLLLDLEGNKLTGSIPV---TFGRLQKLQGLYLPFNKLAGSIP--DQLCHLA 452 (827)
Q Consensus 379 ~~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~~L~Ls~N~l~g~~p--~~~~~l~ 452 (827)
..+|+.|++++|+++ .+|..+ ..+++|++|++++|++++.+|. .++.+++|++|+|++|++++..+ ..+..++
T Consensus 309 ~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~ 387 (549)
T 2z81_A 309 LEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLK 387 (549)
T ss_dssp STTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCT
T ss_pred cccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCC
Confidence 237999999999987 566655 5799999999999999987753 47889999999999999986533 4588899
Q ss_pred cccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcc
Q 047196 453 RLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLS 532 (827)
Q Consensus 453 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls 532 (827)
+|++|++++|+++ .+|..+..+++|++|++++|.+++. |..+ .++|++|||++|++++.+ +.++.|+.|+++
T Consensus 388 ~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l-~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~L~Ls 459 (549)
T 2z81_A 388 NLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVV-KTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQELYIS 459 (549)
T ss_dssp TCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCC-CTTS--CTTCSEEECCSSCCSCCC----CCCTTCCEEECC
T ss_pred CCCEEECCCCCCc-cCChhhcccccccEEECCCCCcccc-cchh--cCCceEEECCCCChhhhc----ccCChhcEEECC
Confidence 9999999999998 6888899999999999999998853 4333 258899999999999854 578899999999
Q ss_pred cceeeecccccccCCCCCCEEECCCCcceeecCCCC---cCCceEeCcCCcCeecCCC
Q 047196 533 RNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF---GYLTELNLSFNKLEGEIPR 587 (827)
Q Consensus 533 ~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~---~~L~~L~ls~N~l~g~ip~ 587 (827)
+|+|+ .+|. .+.+++|+.|||++|++++.+|..+ .+|+.|++++|+++|..|.
T Consensus 460 ~N~l~-~ip~-~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 515 (549)
T 2z81_A 460 RNKLK-TLPD-ASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 515 (549)
T ss_dssp SSCCS-SCCC-GGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHHH
T ss_pred CCccC-cCCC-cccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCcc
Confidence 99998 6776 5678999999999999999888765 4789999999999887773
No 13
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=100.00 E-value=1e-49 Score=486.92 Aligned_cols=461 Identities=20% Similarity=0.187 Sum_probs=393.8
Q ss_pred CcEEEEEcCCCCCcccc-CccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccc--cCCCCCCcE
Q 047196 98 HRVTALNISSLNLQGTI-PPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSV--TFNLSSVLD 174 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~-~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~--~~~l~~L~~ 174 (827)
.+++.|||++|...+.+ |.+|.++++|++|+|++|.+++..|.+|.++++|++|||++|.+++.+|.. +.++++|++
T Consensus 48 ~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~ 127 (844)
T 3j0a_A 48 EQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTR 127 (844)
T ss_dssp CSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCE
T ss_pred ccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCCCCE
Confidence 57899999999777777 678999999999999999999999999999999999999999999877665 889999999
Q ss_pred EEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCC--CCCcEEEccCCCCcccCCCcCcCCcc------cc
Q 047196 175 IRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKC--KRLQLLNLGFKKLSGAIPKEISNLTI------LR 246 (827)
Q Consensus 175 L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l--~~L~~L~L~~n~l~~~~p~~~~~l~~------L~ 246 (827)
|+|++|.+++..|...+..+++|++|+|++|.+++..|..+..+ ++|+.|+++.|.+++..|..++.+.+ |+
T Consensus 128 L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~~~~l~~l~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~~~L~ 207 (844)
T 3j0a_A 128 LDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVCEHELEPLQGKTLSFFSLAANSLYSRVSVDWGKCMNPFRNMVLE 207 (844)
T ss_dssp EEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCCSGGGHHHHHCSSCCCEECCSBSCCCCCCCCCSSSCTTTTCCBS
T ss_pred EECCCCcccccccchhHhhCCCCCEEECCCCcCCeeCHHHcccccCCccceEECCCCccccccccchhhcCCccccCcee
Confidence 99999999987665555556699999999999999999999888 89999999999999999888877766 99
Q ss_pred EEEcccccccccccccccCc--------------------------------------CCCcEEEeecccCcccCchhhh
Q 047196 247 KISLRNNKLRGEIPHEIGYL--------------------------------------PNLENLVLGFNNLVGVVPAAIF 288 (827)
Q Consensus 247 ~L~Ls~N~l~~~~p~~~~~l--------------------------------------~~L~~L~Ls~N~l~~~~p~~~~ 288 (827)
+|++++|.+++..|..+... ++|++|+|++|.+++..|..+.
T Consensus 208 ~L~Ls~n~l~~~~~~~~~~~l~~~~l~~L~l~~~~~~~~~~~~~l~~~~~~~f~~l~~~~L~~L~Ls~n~l~~~~~~~~~ 287 (844)
T 3j0a_A 208 ILDVSGNGWTVDITGNFSNAISKSQAFSLILAHHIMGAGFGFHNIKDPDQNTFAGLARSSVRHLDLSHGFVFSLNSRVFE 287 (844)
T ss_dssp EEBCSSCCSSTTTTSGGGGTSCSCCBSEEECCSSCCBCSSSCSSSTTGGGTTTTTTTTSCCCEEECTTCCCCEECSCCSS
T ss_pred EEecCCCcCchhHHHHHHhhcCcccccceecccccccccccccccCCCChhhhhccccCCccEEECCCCcccccChhhhh
Confidence 99999998887776655422 5788888888888888888888
Q ss_pred cCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCc
Q 047196 289 NMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLD 368 (827)
Q Consensus 289 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~ 368 (827)
.+++|+.|++++|.+.+..+..+. .+++|++|+|++|++++..|..+..+++|+.|++++|.+++..+
T Consensus 288 ~l~~L~~L~L~~n~i~~~~~~~~~-~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~----------- 355 (844)
T 3j0a_A 288 TLKDLKVLNLAYNKINKIADEAFY-GLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQD----------- 355 (844)
T ss_dssp SCCCCCEEEEESCCCCEECTTTTT-TCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCS-----------
T ss_pred cCCCCCEEECCCCcCCCCChHHhc-CCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccCh-----------
Confidence 888888888888888776665554 77888888888888888778888888888888888888765443
Q ss_pred ccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCC-Ccc
Q 047196 369 GVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSI-PDQ 447 (827)
Q Consensus 369 g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~-p~~ 447 (827)
..+..++ +|++|++++|.+++. ..+++|+.|++++|+++. +|.. ..+++.|++++|++++.. +..
T Consensus 356 ----~~~~~l~-~L~~L~Ls~N~l~~i-----~~~~~L~~L~l~~N~l~~-l~~~---~~~l~~L~ls~N~l~~l~~~~~ 421 (844)
T 3j0a_A 356 ----QTFKFLE-KLQTLDLRDNALTTI-----HFIPSIPDIFLSGNKLVT-LPKI---NLTANLIHLSENRLENLDILYF 421 (844)
T ss_dssp ----SCSCSCC-CCCEEEEETCCSCCC-----SSCCSCSEEEEESCCCCC-CCCC---CTTCCEEECCSCCCCSSTTHHH
T ss_pred ----hhhcCCC-CCCEEECCCCCCCcc-----cCCCCcchhccCCCCccc-cccc---ccccceeecccCccccCchhhh
Confidence 2344444 899999999999853 237899999999999984 4543 568999999999998643 234
Q ss_pred ccccccccEEecCCCcccccCCc-cccCCCCCCccccCCCccc-----ccCCccccccccccccCCCCCCCCCCCccccc
Q 047196 448 LCHLARLNTLGLAGNKFSGSIPS-CLGNLTSLRSPDLGSNRLT-----SVLPSTFWNLKDILFFDLSSNSLDGPLSLDIG 521 (827)
Q Consensus 448 ~~~l~~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~-----~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~ 521 (827)
+.++++|+.|+|++|++++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|||++|++++.+|..+.
T Consensus 422 ~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~ 501 (844)
T 3j0a_A 422 LLRVPHLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFS 501 (844)
T ss_dssp HTTCTTCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSS
T ss_pred hhcCCccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHcc
Confidence 56899999999999999975543 4567899999999999997 45567789999999999999999999999999
Q ss_pred ccccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCCCcCCceEeCcCCcCeecCC
Q 047196 522 NLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESFGYLTELNLSFNKLEGEIP 586 (827)
Q Consensus 522 ~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~L~~L~ls~N~l~g~ip 586 (827)
.++.|+.|+|++|+|++..|..+. ++|+.|||++|++++.+|..|.+|+.|++++|.+.+..+
T Consensus 502 ~l~~L~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~~~~L~~l~l~~Np~~C~c~ 564 (844)
T 3j0a_A 502 HLTALRGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDVFVSLSVLDITHNKFICECE 564 (844)
T ss_dssp SCCSCSEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCCCSSCCEEEEEEECCCCSSS
T ss_pred chhhhheeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhHhCCcCEEEecCCCcccccc
Confidence 999999999999999988777776 899999999999999999999999999999999987665
No 14
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-49 Score=465.19 Aligned_cols=464 Identities=20% Similarity=0.195 Sum_probs=358.6
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRL 177 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 177 (827)
.+++.|||++|.+++..+.+|.++++|++|||++|++++..|..|.++++|++|+|++|++++..|..+.++++|++|++
T Consensus 28 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (570)
T 2z63_A 28 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 107 (570)
T ss_dssp SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEEC
T ss_pred ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCccccccccc
Confidence 47899999999999988889999999999999999999888888999999999999999999888889999999999999
Q ss_pred CCCCCCCCcchhHhhccccccEEEeecccccc-cCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccc----cEEEccc
Q 047196 178 DSDKLSGELPVNICNYLHYLKVLFLAKNMFHG-QIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTIL----RKISLRN 252 (827)
Q Consensus 178 ~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L----~~L~Ls~ 252 (827)
++|.+++ +|...+..+++|++|++++|.+++ .+|..++++++|++|++++|.+++..|..++.+++| +.|++++
T Consensus 108 ~~n~l~~-l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~ 186 (570)
T 2z63_A 108 VETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (570)
T ss_dssp TTSCCCC-STTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTT
T ss_pred ccccccc-CCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCC
Confidence 9999985 444223445699999999999987 579999999999999999999998888889888888 8999999
Q ss_pred ccccccccccccCcCCCcEEEeecccCcc-cCchhhhcCCCccE--------------------------------EEec
Q 047196 253 NKLRGEIPHEIGYLPNLENLVLGFNNLVG-VVPAAIFNMSTVKK--------------------------------IYLL 299 (827)
Q Consensus 253 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~--------------------------------L~l~ 299 (827)
|.+++..|..+..+ +|++|++++|.... .+|..+.+++.++. +++.
T Consensus 187 n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~l~~l~l~~l~l~ 265 (570)
T 2z63_A 187 NPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLA 265 (570)
T ss_dssp CCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHHHTTTTCEEEEEEEEECCCCSSCEECCTTTTGGGGGSEEEEEEEE
T ss_pred CCceecCHHHhccC-cceeEecccccccccchhhhhcCccccceeeeccccccCchhhhhcchhhhccccccchhhhhhh
Confidence 99998888777766 79999999885432 23344444444443 3333
Q ss_pred CC-ccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcc
Q 047196 300 DN-SLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNL 378 (827)
Q Consensus 300 ~n-~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~ 378 (827)
.+ .+.+.++..+. .+++|+.|++++|+++ .+|..+..+ +|+.|++++|.+. . +|. ..+
T Consensus 266 ~~~~~~~~~~~~~~-~l~~L~~L~l~~~~l~-~l~~~~~~~-~L~~L~l~~n~~~-~---------------l~~--~~l 324 (570)
T 2z63_A 266 YLDYYLDDIIDLFN-CLTNVSSFSLVSVTIE-RVKDFSYNF-GWQHLELVNCKFG-Q---------------FPT--LKL 324 (570)
T ss_dssp ETTEEESCSTTTTG-GGTTCSEEEEESCEEC-SCCBCCSCC-CCSEEEEESCBCS-S---------------CCB--CBC
T ss_pred cchhhhhhchhhhc-CcCcccEEEecCccch-hhhhhhccC-CccEEeeccCccc-c---------------cCc--ccc
Confidence 33 33333443333 4566677777776666 356666666 6777777666654 2 222 122
Q ss_pred cccccEEEccCCcCccccCccccCCCCCceEeccCccccccc--cccccCCCCCcEEECCCCCCCCCCCccccccccccE
Q 047196 379 SMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSI--PVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNT 456 (827)
Q Consensus 379 ~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~--p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 456 (827)
+ +|+.|++++|.+.+.++. ..+++|+.|++++|++++.. |..+..+++|++|++++|.+.+..+ .+..+++|+.
T Consensus 325 ~-~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~ 400 (570)
T 2z63_A 325 K-SLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEH 400 (570)
T ss_dssp S-SCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCE
T ss_pred c-ccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCE
Confidence 2 678888888887776665 66788888888888887654 6677788888888888888875443 3777888888
Q ss_pred EecCCCcccccCC-ccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCC-CCCcccccccccCceEEcccc
Q 047196 457 LGLAGNKFSGSIP-SCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLD-GPLSLDIGNLRVVIGINLSRN 534 (827)
Q Consensus 457 L~Ls~N~l~~~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~-g~~p~~~~~l~~L~~L~Ls~N 534 (827)
|++++|++++..| ..+.++++|++|++++|.+.+..|..+.++++|+.|++++|.++ +.+|..++.++.|+.|++++|
T Consensus 401 L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n 480 (570)
T 2z63_A 401 LDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQC 480 (570)
T ss_dssp EECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTS
T ss_pred EEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCC
Confidence 8888888877665 46777888888888888888888888888888888888888887 567778888888888888888
Q ss_pred eeeecccccccCCCCCCEEECCCCcceeecCCCC---cCCceEeCcCCcCeecCCCC
Q 047196 535 NFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF---GYLTELNLSFNKLEGEIPRG 588 (827)
Q Consensus 535 ~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~---~~L~~L~ls~N~l~g~ip~~ 588 (827)
++++..|..++++++|+.|++++|++++.+|..+ .+|+.|++++|+++|.+|..
T Consensus 481 ~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~~ 537 (570)
T 2z63_A 481 QLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 537 (570)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTTT
T ss_pred ccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcch
Confidence 8888778888888888888888888888777655 36778888888888777753
No 15
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=100.00 E-value=4.8e-48 Score=452.79 Aligned_cols=478 Identities=21% Similarity=0.258 Sum_probs=405.9
Q ss_pred EEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCC
Q 047196 103 LNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKL 182 (827)
Q Consensus 103 L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l 182 (827)
++-++.+++ .+|..+. +++++|||++|++++..+.+|.++++|++|||++|++++..|..+.++++|++|+|++|.+
T Consensus 12 ~~c~~~~l~-~ip~~l~--~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 88 (570)
T 2z63_A 12 YQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPI 88 (570)
T ss_dssp EECCSSCCS-SCCSSSC--SSCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCC
T ss_pred EEeCCCCcc-ccCCCcc--ccccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcC
Confidence 344444554 3455443 5799999999999988888999999999999999999998888999999999999999999
Q ss_pred CCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcc-cCCCcCcCCccccEEEcccccccccccc
Q 047196 183 SGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSG-AIPKEISNLTILRKISLRNNKLRGEIPH 261 (827)
Q Consensus 183 ~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 261 (827)
++ +|+..+..+++|++|++++|.+++..+..++++++|++|++++|.+++ .+|..++++++|++|++++|++++..|.
T Consensus 89 ~~-~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~ 167 (570)
T 2z63_A 89 QS-LALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCT 167 (570)
T ss_dssp CE-ECTTTTTTCTTCCEEECTTSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGG
T ss_pred Cc-cCHhhhcCccccccccccccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHH
Confidence 86 444444446699999999999998777789999999999999999987 5799999999999999999999988889
Q ss_pred cccCcCCC----cEEEeecccCcccCchhhhcCCCccEEEecCCccccc-cChhhhcCCC--------------------
Q 047196 262 EIGYLPNL----ENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGS-FSLGIDLSLP-------------------- 316 (827)
Q Consensus 262 ~~~~l~~L----~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~-~~~~~~~~l~-------------------- 316 (827)
.++.+++| +.|++++|.+++..|..+... +|+.|++++|..... ++..+ ..++
T Consensus 168 ~~~~l~~L~~~~~~L~l~~n~l~~~~~~~~~~~-~L~~L~l~~n~~~~~~~~~~~-~~l~~l~~~~l~~~~~~~~~~l~~ 245 (570)
T 2z63_A 168 DLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEI-RLHKLTLRNNFDSLNVMKTCI-QGLAGLEVHRLVLGEFRNEGNLEK 245 (570)
T ss_dssp GGHHHHTCTTCCCEEECTTCCCCEECTTTTTTC-EEEEEEEESCCSCTTHHHHHH-HTTTTCEEEEEEEEECCCCSSCEE
T ss_pred HccchhccchhhhhcccCCCCceecCHHHhccC-cceeEecccccccccchhhhh-cCccccceeeeccccccCchhhhh
Confidence 99999999 899999999999888877665 899999998843221 11111 0111
Q ss_pred ------------CccEEeCcCC-ccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhccccccc
Q 047196 317 ------------NVERLNLGLN-RFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLE 383 (827)
Q Consensus 317 ------------~L~~L~L~~N-~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~ 383 (827)
.++.++++.+ .+.+.+|..+..+++|+.|++++|.+++ +|..+... +|+
T Consensus 246 ~~~~~~~~l~~l~l~~l~l~~~~~~~~~~~~~~~~l~~L~~L~l~~~~l~~----------------l~~~~~~~--~L~ 307 (570)
T 2z63_A 246 FDKSALEGLCNLTIEEFRLAYLDYYLDDIIDLFNCLTNVSSFSLVSVTIER----------------VKDFSYNF--GWQ 307 (570)
T ss_dssp CCTTTTGGGGGSEEEEEEEEETTEEESCSTTTTGGGTTCSEEEEESCEECS----------------CCBCCSCC--CCS
T ss_pred cchhhhccccccchhhhhhhcchhhhhhchhhhcCcCcccEEEecCccchh----------------hhhhhccC--Ccc
Confidence 2456666666 7778888899999999999999998863 33344444 799
Q ss_pred EEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCC--CccccccccccEEecCC
Q 047196 384 NIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSI--PDQLCHLARLNTLGLAG 461 (827)
Q Consensus 384 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~--p~~~~~l~~L~~L~Ls~ 461 (827)
+|++++|.+. .+|. ..+++|+.|++++|.+.+..+. ..+++|+.|++++|++++.. |..+.++++|++|++++
T Consensus 308 ~L~l~~n~~~-~l~~--~~l~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~ 382 (570)
T 2z63_A 308 HLELVNCKFG-QFPT--LKLKSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSF 382 (570)
T ss_dssp EEEEESCBCS-SCCB--CBCSSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCS
T ss_pred EEeeccCccc-ccCc--ccccccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCC
Confidence 9999999998 6665 4789999999999999887765 78999999999999998654 77888999999999999
Q ss_pred CcccccCCccccCCCCCCccccCCCcccccCC-ccccccccccccCCCCCCCCCCCcccccccccCceEEcccceee-ec
Q 047196 462 NKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLP-STFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFS-GD 539 (827)
Q Consensus 462 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g~ 539 (827)
|++++..+. +..+++|+.|++++|.+.+..| ..+.++++|++|++++|.+++.+|..+..++.|+.|++++|+++ +.
T Consensus 383 n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~ 461 (570)
T 2z63_A 383 NGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENF 461 (570)
T ss_dssp CSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGE
T ss_pred Ccccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCcccc
Confidence 999965554 9999999999999999998877 57899999999999999999999999999999999999999998 68
Q ss_pred ccccccCCCCCCEEECCCCcceeecCCCCc---CCceEeCcCCcCeecCCCC-CCCCCCcccccccCccccCCCC
Q 047196 540 IPSTIGDLKDLQNISLACNGLEGLIPESFG---YLTELNLSFNKLEGEIPRG-GPFANFTAKSFMGNEKLCGLPN 610 (827)
Q Consensus 540 ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~---~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lc~~p~ 610 (827)
+|..++.+++|+.|++++|++++.+|..+. +|++|++++|++++.+|.. ..+..+....+.+|+..|.+|.
T Consensus 462 ~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 462 LPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp ECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred chhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 999999999999999999999999998765 7999999999999877753 4566777788899998887654
No 16
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=8.9e-49 Score=470.87 Aligned_cols=436 Identities=20% Similarity=0.223 Sum_probs=355.5
Q ss_pred CCCCEEECCCCCCCccCChhhhhccccceEEe-cCCCCCCccccccCCC----CCCc--EEE----------cCCCCCCC
Q 047196 122 SSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDF-SDNQLSGSLSSVTFNL----SSVL--DIR----------LDSDKLSG 184 (827)
Q Consensus 122 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdL-s~N~l~g~~p~~~~~l----~~L~--~L~----------L~~n~l~g 184 (827)
.+++.|+|++|+++|.+|+++++|++|++||| ++|.++|..|...... +..+ .++ .....+++
T Consensus 323 ~~V~~L~Ls~~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~ 402 (876)
T 4ecn_A 323 GRVTGLSLAGFGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSD 402 (876)
T ss_dssp SCEEEEECTTTCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCH
T ss_pred CCEEEEECccCCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhH
Confidence 57899999999999999999999999999999 9999988744332111 0000 000 00001111
Q ss_pred CcchhHh----------hccccccEEEee--cccccccCCccCCCCCCCcEEEccCCCCcc-----------------cC
Q 047196 185 ELPVNIC----------NYLHYLKVLFLA--KNMFHGQIPLALSKCKRLQLLNLGFKKLSG-----------------AI 235 (827)
Q Consensus 185 ~ip~~~~----------~~~~~L~~L~Ls--~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-----------------~~ 235 (827)
.++..+. .....++.+.+. .|.+++ +|..++++++|++|+|++|.+++ .+
T Consensus 403 l~~~~l~~~~~~~~i~~~~~l~l~~l~l~~~~N~L~~-IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~i 481 (876)
T 4ecn_A 403 LLQDAINRNPEMKPIKKDSRISLKDTQIGNLTNRITF-ISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYE 481 (876)
T ss_dssp HHHHHHHTCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHT
T ss_pred HHHHHhhhCccccccccccccchhhceeccccCcccc-hhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccC
Confidence 1111111 001134444444 488888 89999999999999999999998 49
Q ss_pred CCcCc--CCccccEEEcccccccccccccccCcCCCcEEEeeccc-Ccc-cCchhhhcCC-------CccEEEecCCccc
Q 047196 236 PKEIS--NLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNN-LVG-VVPAAIFNMS-------TVKKIYLLDNSLL 304 (827)
Q Consensus 236 p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~-~~p~~~~~l~-------~L~~L~l~~n~l~ 304 (827)
|..++ ++++|++|+|++|++.+.+|..++++++|++|+|++|+ ++| .+|..+.+++ +|+.|++++|.+.
T Consensus 482 P~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~ 561 (876)
T 4ecn_A 482 NEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE 561 (876)
T ss_dssp TSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC
T ss_pred ChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC
Confidence 99988 99999999999999999999999999999999999998 999 8999888776 9999999999999
Q ss_pred cccCh--hhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhccccc-
Q 047196 305 GSFSL--GIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMS- 381 (827)
Q Consensus 305 ~~~~~--~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~- 381 (827)
.+|. .+. .+++|+.|+|++|+++ .+| .+..+++|+.|++++|.++ . +|..+..+. +
T Consensus 562 -~ip~~~~l~-~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L~~L~Ls~N~l~-~---------------lp~~l~~l~-~~ 620 (876)
T 4ecn_A 562 -EFPASASLQ-KMVKLGLLDCVHNKVR-HLE-AFGTNVKLTDLKLDYNQIE-E---------------IPEDFCAFT-DQ 620 (876)
T ss_dssp -BCCCHHHHT-TCTTCCEEECTTSCCC-BCC-CCCTTSEESEEECCSSCCS-C---------------CCTTSCEEC-TT
T ss_pred -ccCChhhhh-cCCCCCEEECCCCCcc-cch-hhcCCCcceEEECcCCccc-c---------------chHHHhhcc-cc
Confidence 8887 555 8999999999999999 888 8999999999999999987 3 344556665 5
Q ss_pred ccEEEccCCcCccccCccccCCCC--CceEeccCccccccccccc---c--CCCCCcEEECCCCCCCCCCCccc-ccccc
Q 047196 382 LENIYISNCNIGGSIPQLISNLSN--LLLLDLEGNKLTGSIPVTF---G--RLQKLQGLYLPFNKLAGSIPDQL-CHLAR 453 (827)
Q Consensus 382 L~~L~Ls~N~l~g~~p~~~~~l~~--L~~L~Ls~N~l~g~~p~~~---~--~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~ 453 (827)
|+.|+|++|+++ .+|..+..++. |+.|+|++|+++|.+|... . .+++|+.|+|++|+++ .+|..+ ..+++
T Consensus 621 L~~L~Ls~N~L~-~lp~~~~~~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~L~~L~Ls~N~L~-~lp~~~~~~l~~ 698 (876)
T 4ecn_A 621 VEGLGFSHNKLK-YIPNIFNAKSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGINASTVTLSYNEIQ-KFPTELFATGSP 698 (876)
T ss_dssp CCEEECCSSCCC-SCCSCCCTTCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCCEEEEECCSSCCC-SCCHHHHHTTCC
T ss_pred CCEEECcCCCCC-cCchhhhccccCCCCEEECcCCcCCCccccchhhhccccCCCcCEEEccCCcCC-ccCHHHHccCCC
Confidence 999999999999 78988887765 9999999999999876433 2 3458999999999999 667665 47899
Q ss_pred ccEEecCCCcccccCCccccCC--------CCCCccccCCCcccccCCcccc--ccccccccCCCCCCCCCCCccccccc
Q 047196 454 LNTLGLAGNKFSGSIPSCLGNL--------TSLRSPDLGSNRLTSVLPSTFW--NLKDILFFDLSSNSLDGPLSLDIGNL 523 (827)
Q Consensus 454 L~~L~Ls~N~l~~~~p~~~~~l--------~~L~~L~Ls~N~l~~~~p~~~~--~l~~L~~LdLs~N~l~g~~p~~~~~l 523 (827)
|+.|+|++|+++ .+|..+... ++|+.|+|++|+++ .+|..+. .+++|+.|+|++|++++ +|..++.+
T Consensus 699 L~~L~Ls~N~L~-~ip~~~~~~~~~~l~nl~~L~~L~Ls~N~L~-~lp~~l~~~~l~~L~~L~Ls~N~L~~-lp~~l~~L 775 (876)
T 4ecn_A 699 ISTIILSNNLMT-SIPENSLKPKDGNYKNTYLLTTIDLRFNKLT-SLSDDFRATTLPYLSNMDVSYNCFSS-FPTQPLNS 775 (876)
T ss_dssp CSEEECCSCCCS-CCCTTSSSCTTSCCTTGGGCCEEECCSSCCC-CCCGGGSTTTCTTCCEEECCSSCCSS-CCCGGGGC
T ss_pred CCEEECCCCcCC-ccChHHhccccccccccCCccEEECCCCCCc-cchHHhhhccCCCcCEEEeCCCCCCc-cchhhhcC
Confidence 999999999999 777765443 38999999999999 6788887 89999999999999998 78888899
Q ss_pred ccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCCCc---CCceEeCcCCcCeecCCCCCCCCCCcccccc
Q 047196 524 RVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESFG---YLTELNLSFNKLEGEIPRGGPFANFTAKSFM 600 (827)
Q Consensus 524 ~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~---~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~ 600 (827)
++|+.|+|++|+ ++++|++.+.+|..+. +|+.|++++|++ +.||.. .+..+....+.
T Consensus 776 ~~L~~L~Ls~N~------------------~ls~N~l~~~ip~~l~~L~~L~~L~Ls~N~L-~~Ip~~-l~~~L~~LdLs 835 (876)
T 4ecn_A 776 SQLKAFGIRHQR------------------DAEGNRILRQWPTGITTCPSLIQLQIGSNDI-RKVDEK-LTPQLYILDIA 835 (876)
T ss_dssp TTCCEEECCCCB------------------CTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCSSSCEEECC
T ss_pred CCCCEEECCCCC------------------CcccccccccChHHHhcCCCCCEEECCCCCC-CccCHh-hcCCCCEEECC
Confidence 999999999988 7889999999998775 789999999999 899986 34566667777
Q ss_pred cCcc
Q 047196 601 GNEK 604 (827)
Q Consensus 601 ~n~~ 604 (827)
+|+.
T Consensus 836 ~N~l 839 (876)
T 4ecn_A 836 DNPN 839 (876)
T ss_dssp SCTT
T ss_pred CCCC
Confidence 7753
No 17
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=100.00 E-value=2.5e-49 Score=467.91 Aligned_cols=492 Identities=20% Similarity=0.246 Sum_probs=388.2
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCcCCCCCCCCC---CCCcccc-eecCCC--CCcEEEEEcCCCCCccccCccccCCCCCC
Q 047196 52 NITTDQQALLALKAHISYDPTNLLAQNSTSNT---SVCNWIG-ITCNVN--SHRVTALNISSLNLQGTIPPQLGNLSSLT 125 (827)
Q Consensus 52 ~~~~~~~aLl~~k~~~~~~~~~~l~~w~~~~~---~~C~W~g-v~C~~~--~~~v~~L~L~~~~l~g~~~~~l~~L~~L~ 125 (827)
....+.+.-.++++-...- + -..|...+. ..|.|.. ..|+.. ...|+. .. . .+++
T Consensus 24 ~~~~~~~d~~aL~~~~~~~--~-~~~w~~~~~~~~~~~~W~~~~~~c~w~~~~GV~C---~~---------~----~~V~ 84 (636)
T 4eco_A 24 RTAEYIKDYLALKEIWDAL--N-GKNWSQQGFGTQPGANWNFNKELDMWGAQPGVSL---NS---------N----GRVT 84 (636)
T ss_dssp CCCHHHHHHHHHHHHHHHT--T-GGGCCCCC------CCCCCSSCGGGTTCCTTEEE---CT---------T----CCEE
T ss_pred hhhhHHHHHHHHHHHHHHc--C-CCCcccCCcCCccCCCCCCCCCcccccCCCCeEE---cC---------C----CCEE
Confidence 3445556677777665221 1 235763332 2358963 333322 134553 00 0 4788
Q ss_pred EEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecc
Q 047196 126 TLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKN 205 (827)
Q Consensus 126 ~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N 205 (827)
.|+|++|+++|.+|+++++|++|++|||++|.+.... ..++.. .+...+|... ...|+ ++++.|
T Consensus 85 ~L~L~~~~l~g~lp~~l~~L~~L~~L~Ls~N~~~~~~-~~~~~~-----------~~~~~~~~~~---~~~l~-l~l~~~ 148 (636)
T 4eco_A 85 GLSLEGFGASGRVPDAIGQLTELEVLALGSHGEKVNE-RLFGPK-----------GISANMSDEQ---KQKMR-MHYQKT 148 (636)
T ss_dssp EEECTTSCCEEEECGGGGGCTTCCEEESCCGGGGGTC-CSBSTT-----------SBCTTCCHHH---HHHHH-THHHHH
T ss_pred EEEecCcccCCcCChHHhcCccceEEECcCCccccCC-cccccc-----------ccccCchHHH---HHHHH-hhHHHh
Confidence 9999999999999999999999999999999872110 000000 0001234433 12344 555555
Q ss_pred cccccCCccCC-------------------CCCCCcEEEcc--CCCCcccCCCcCcCCccccEEEccccccccc------
Q 047196 206 MFHGQIPLALS-------------------KCKRLQLLNLG--FKKLSGAIPKEISNLTILRKISLRNNKLRGE------ 258 (827)
Q Consensus 206 ~l~~~~p~~l~-------------------~l~~L~~L~L~--~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~------ 258 (827)
.+.+.+|..+. ....++.+.++ .|+++| +|.+++++++|++|+|++|+++|.
T Consensus 149 ~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~ 227 (636)
T 4eco_A 149 FVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAW 227 (636)
T ss_dssp HTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSC
T ss_pred hhccCchhhHHHHHHHHhhcCccccccccccccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccc
Confidence 55555544443 12233333333 588999 999999999999999999999986
Q ss_pred -----------cccccc--CcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCc-ccc-ccChhhhcCC------CC
Q 047196 259 -----------IPHEIG--YLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNS-LLG-SFSLGIDLSL------PN 317 (827)
Q Consensus 259 -----------~p~~~~--~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~-l~~-~~~~~~~~~l------~~ 317 (827)
+|..++ ++++|++|+|++|++.+.+|..+.++++|+.|++++|. ++| .+|..+. .+ ++
T Consensus 228 ~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~-~L~~~~~l~~ 306 (636)
T 4eco_A 228 ENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQ-ALADAPVGEK 306 (636)
T ss_dssp SCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHH-HHHHSGGGGT
T ss_pred cccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHH-hhhccccCCC
Confidence 999999 99999999999999999999999999999999999998 998 8888776 44 89
Q ss_pred ccEEeCcCCccccccCc--cccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccc
Q 047196 318 VERLNLGLNRFSGTIPS--FITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGS 395 (827)
Q Consensus 318 L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~ 395 (827)
|++|++++|+++ .+|. .++++++|+.|++++|+++|.+| .+..+. +|++|++++|+++ .
T Consensus 307 L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip----------------~~~~l~-~L~~L~L~~N~l~-~ 367 (636)
T 4eco_A 307 IQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP----------------AFGSEI-KLASLNLAYNQIT-E 367 (636)
T ss_dssp CCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC----------------CCEEEE-EESEEECCSSEEE-E
T ss_pred CCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh----------------hhCCCC-CCCEEECCCCccc-c
Confidence 999999999999 8998 99999999999999999987766 233444 8999999999999 8
Q ss_pred cCccccCCCC-CceEeccCccccccccccccCCC--CCcEEECCCCCCCCCCCcccc-------ccccccEEecCCCccc
Q 047196 396 IPQLISNLSN-LLLLDLEGNKLTGSIPVTFGRLQ--KLQGLYLPFNKLAGSIPDQLC-------HLARLNTLGLAGNKFS 465 (827)
Q Consensus 396 ~p~~~~~l~~-L~~L~Ls~N~l~g~~p~~~~~l~--~L~~L~Ls~N~l~g~~p~~~~-------~l~~L~~L~Ls~N~l~ 465 (827)
+|..+..+++ |+.|++++|+++ .+|..+..++ +|+.|++++|++++.+|..+. .+++|+.|++++|+++
T Consensus 368 lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~L~~L~Ls~N~l~ 446 (636)
T 4eco_A 368 IPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGINVSSINLSNNQIS 446 (636)
T ss_dssp CCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCCEEEEECCSSCCC
T ss_pred ccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCCCCEEECcCCccC
Confidence 8999999999 999999999999 7888887765 999999999999999999988 8889999999999999
Q ss_pred ccCCcc-ccCCCCCCccccCCCcccccCCcc-cccc-------ccccccCCCCCCCCCCCccccc--ccccCceEEcccc
Q 047196 466 GSIPSC-LGNLTSLRSPDLGSNRLTSVLPST-FWNL-------KDILFFDLSSNSLDGPLSLDIG--NLRVVIGINLSRN 534 (827)
Q Consensus 466 ~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l-------~~L~~LdLs~N~l~g~~p~~~~--~l~~L~~L~Ls~N 534 (827)
.+|.. +..+++|++|+|++|.++ .+|.. +... ++|+.|+|++|+++ .+|..+. .++.|+.|+|++|
T Consensus 447 -~lp~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N 523 (636)
T 4eco_A 447 -KFPKELFSTGSPLSSINLMGNMLT-EIPKNSLKDENENFKNTYLLTSIDLRFNKLT-KLSDDFRATTLPYLVGIDLSYN 523 (636)
T ss_dssp -SCCTHHHHTTCCCSEEECCSSCCS-BCCSSSSEETTEECTTGGGCCEEECCSSCCC-BCCGGGSTTTCTTCCEEECCSS
T ss_pred -cCCHHHHccCCCCCEEECCCCCCC-CcCHHHhccccccccccCCccEEECcCCcCC-ccChhhhhccCCCcCEEECCCC
Confidence 56654 556999999999999999 45544 4333 39999999999999 7888887 9999999999999
Q ss_pred eeeecccccccCCCCCCEEEC------CCCcceeecCCCCc---CCceEeCcCCcCeecCCCCCCCCCCcccccccCccc
Q 047196 535 NFSGDIPSTIGDLKDLQNISL------ACNGLEGLIPESFG---YLTELNLSFNKLEGEIPRGGPFANFTAKSFMGNEKL 605 (827)
Q Consensus 535 ~l~g~ip~~~~~l~~L~~L~L------s~N~l~g~ip~~~~---~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~l 605 (827)
+|++ +|..++++++|+.|+| ++|++.+.+|..+. +|+.|++++|++ +.||.. .+..+....+.+|+..
T Consensus 524 ~l~~-ip~~~~~l~~L~~L~Ls~N~~ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l-~~ip~~-~~~~L~~L~Ls~N~l~ 600 (636)
T 4eco_A 524 SFSK-FPTQPLNSSTLKGFGIRNQRDAQGNRTLREWPEGITLCPSLTQLQIGSNDI-RKVNEK-ITPNISVLDIKDNPNI 600 (636)
T ss_dssp CCSS-CCCGGGGCSSCCEEECCSCBCTTCCBCCCCCCTTGGGCSSCCEEECCSSCC-CBCCSC-CCTTCCEEECCSCTTC
T ss_pred CCCC-cChhhhcCCCCCEEECCCCcccccCcccccChHHHhcCCCCCEEECCCCcC-CccCHh-HhCcCCEEECcCCCCc
Confidence 9998 9999999999999999 56889999998775 789999999999 899976 3367777778888766
Q ss_pred c
Q 047196 606 C 606 (827)
Q Consensus 606 c 606 (827)
|
T Consensus 601 ~ 601 (636)
T 4eco_A 601 S 601 (636)
T ss_dssp E
T ss_pred c
Confidence 5
No 18
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=100.00 E-value=8e-48 Score=448.81 Aligned_cols=490 Identities=19% Similarity=0.228 Sum_probs=401.2
Q ss_pred ecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCC
Q 047196 92 TCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSS 171 (827)
Q Consensus 92 ~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~ 171 (827)
.|... .| .|.++++++ .+|+.+. ++|++|||++|++++..|.+|.++++|++|+|++|++++..|..+.++++
T Consensus 3 ~C~~~--~~--c~~~~~~l~-~ip~~~~--~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~ 75 (549)
T 2z81_A 3 SCDAS--GV--CDGRSRSFT-SIPSGLT--AAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGS 75 (549)
T ss_dssp EECTT--SE--EECTTSCCS-SCCSCCC--TTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTT
T ss_pred cCCCC--ce--EECCCCccc-cccccCC--CCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhcccccc
Confidence 57542 34 689999998 4566554 79999999999999999999999999999999999999999999999999
Q ss_pred CcEEEcCCCCCCCCcchhHhhccccccEEEeecccccc-cCCccCCCCCCCcEEEccCCCCcccCC-CcCcCCccccEEE
Q 047196 172 VLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHG-QIPLALSKCKRLQLLNLGFKKLSGAIP-KEISNLTILRKIS 249 (827)
Q Consensus 172 L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p-~~~~~l~~L~~L~ 249 (827)
|++|+|++|.+++..|..+.. +++|++|++++|.+++ .+|..++++++|++|++++|.+.+.+| ..++++++|++|+
T Consensus 76 L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~ 154 (549)
T 2z81_A 76 LEHLDLSDNHLSSLSSSWFGP-LSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELE 154 (549)
T ss_dssp CCEEECTTSCCCSCCHHHHTT-CTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEE
T ss_pred CCEEECCCCccCccCHHHhcc-CCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeee
Confidence 999999999999755554554 5699999999999987 467899999999999999999555555 6899999999999
Q ss_pred cccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCcccccc--ChhhhcCCCCccEEeCcCCc
Q 047196 250 LRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSF--SLGIDLSLPNVERLNLGLNR 327 (827)
Q Consensus 250 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~--~~~~~~~l~~L~~L~L~~N~ 327 (827)
+++|++++..|..++.+++|++|+++.|.+....+..+..+++|+.|++++|.+.+.. +..+...+++|+.|++++|+
T Consensus 155 L~~n~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~~L~~L~l~~n~ 234 (549)
T 2z81_A 155 IKALSLRNYQSQSLKSIRDIHHLTLHLSESAFLLEIFADILSSVRYLELRDTNLARFQFSPLPVDEVSSPMKKLAFRGSV 234 (549)
T ss_dssp EEETTCCEECTTTTTTCSEEEEEEEECSBSTTHHHHHHHSTTTBSEEEEESCBCTTCCCCCCSSCCCCCCCCEEEEESCE
T ss_pred ccCCcccccChhhhhccccCceEecccCcccccchhhHhhcccccEEEccCCccccccccccchhhhhhcccceeccccc
Confidence 9999999999999999999999999999986543334457999999999999998742 22333457899999999999
Q ss_pred cccccC----ccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccc-----cCc
Q 047196 328 FSGTIP----SFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGS-----IPQ 398 (827)
Q Consensus 328 l~~~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~-----~p~ 398 (827)
+++..+ ..+..+++|+.+++++|.+.+...-.. . ....+..+. +++.|++.++.+... ++.
T Consensus 235 l~~~~~~~l~~~~~~~~~L~~l~l~~~~~~~~~~~~~------~---~~~~~~~l~-~L~~L~l~~~~i~~~~~~~~l~~ 304 (549)
T 2z81_A 235 LTDESFNELLKLLRYILELSEVEFDDCTLNGLGDFNP------S---ESDVVSELG-KVETVTIRRLHIPQFYLFYDLST 304 (549)
T ss_dssp EEHHHHHHHHGGGGGCTTCCEEEEESCEEECCSCCCC------C---TTTCCCCCT-TCCEEEEESCBCSCGGGSCCCCH
T ss_pred cchhHHHHHHHHhhhhccccccccccccccccccccc------c---chhhhhhhc-ccccccccccccchhhhcccchh
Confidence 987544 345678999999999999887422100 0 001122333 789999999887642 233
Q ss_pred cccCCCCCceEeccCccccccccccc-cCCCCCcEEECCCCCCCCCCCc---cccccccccEEecCCCcccccCC--ccc
Q 047196 399 LISNLSNLLLLDLEGNKLTGSIPVTF-GRLQKLQGLYLPFNKLAGSIPD---QLCHLARLNTLGLAGNKFSGSIP--SCL 472 (827)
Q Consensus 399 ~~~~l~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~~L~Ls~N~l~~~~p--~~~ 472 (827)
.+....+|+.|++++|++. .+|..+ ..+++|++|++++|++++.+|. .+..+++|++|++++|++++..+ ..+
T Consensus 305 ~~~~~~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 383 (549)
T 2z81_A 305 VYSLLEKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEIL 383 (549)
T ss_dssp HHHHSTTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHG
T ss_pred hhhhcccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhh
Confidence 3445678999999999997 566665 6899999999999999987753 47889999999999999986533 458
Q ss_pred cCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCE
Q 047196 473 GNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQN 552 (827)
Q Consensus 473 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~ 552 (827)
..+++|++||+++|+++ .+|..+..+++|++|++++|.+++ +|..+ .+.|+.|++++|+|++.+ +.+++|+.
T Consensus 384 ~~l~~L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~-l~~~~--~~~L~~L~Ls~N~l~~~~----~~l~~L~~ 455 (549)
T 2z81_A 384 LTLKNLTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRV-VKTCI--PQTLEVLDVSNNNLDSFS----LFLPRLQE 455 (549)
T ss_dssp GGCTTCCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSC-CCTTS--CTTCSEEECCSSCCSCCC----CCCTTCCE
T ss_pred hcCCCCCEEECCCCCCc-cCChhhcccccccEEECCCCCccc-ccchh--cCCceEEECCCCChhhhc----ccCChhcE
Confidence 89999999999999999 578889999999999999999985 34333 268999999999999753 57899999
Q ss_pred EECCCCcceeecCCC--CcCCceEeCcCCcCeecCCCC-CCCCCCcccccccCccccCCC
Q 047196 553 ISLACNGLEGLIPES--FGYLTELNLSFNKLEGEIPRG-GPFANFTAKSFMGNEKLCGLP 609 (827)
Q Consensus 553 L~Ls~N~l~g~ip~~--~~~L~~L~ls~N~l~g~ip~~-~~~~~~~~~~~~~n~~lc~~p 609 (827)
|+|++|+++ .+|.. +.+|++||+++|++++.+|.. ..+..+....+.+|+..|.+|
T Consensus 456 L~Ls~N~l~-~ip~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 456 LYISRNKLK-TLPDASLFPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp EECCSSCCS-SCCCGGGCTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred EECCCCccC-cCCCcccCccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 999999998 56653 458999999999999987763 456677778889999888653
No 19
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=2e-48 Score=450.73 Aligned_cols=455 Identities=20% Similarity=0.217 Sum_probs=370.3
Q ss_pred EEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCC
Q 047196 101 TALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSD 180 (827)
Q Consensus 101 ~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n 180 (827)
+.||+++|+++ .+|..+. ++|++|||++|++++..|..|.++++|++|||++|++++..|..+.++++|++|+|++|
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N 79 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKFNQELEYLDLSHN 79 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTTCTTCCEEECCSS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhcccCCCEEecCCC
Confidence 46899999999 4777666 89999999999999888889999999999999999999998999999999999999999
Q ss_pred CCCCCcchhHhhccccccEEEeecccccc-cCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccc--cEEEcccccc--
Q 047196 181 KLSGELPVNICNYLHYLKVLFLAKNMFHG-QIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTIL--RKISLRNNKL-- 255 (827)
Q Consensus 181 ~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~Ls~N~l-- 255 (827)
+++ .+|.. .+++|++|+|++|.+++ .+|..|+++++|++|++++|.+++ ..+..+++| ++|++++|.+
T Consensus 80 ~l~-~lp~~---~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 80 KLV-KISCH---PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp CCC-EEECC---CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred cee-ecCcc---ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 998 68876 46699999999999987 578899999999999999999886 356777777 9999999999
Q ss_pred cccccccccCcC-CCcEEEeecccCcccCch-hhhcCCCccEEEecCCc-------cccccChhhhcCCCCccEEeCcCC
Q 047196 256 RGEIPHEIGYLP-NLENLVLGFNNLVGVVPA-AIFNMSTVKKIYLLDNS-------LLGSFSLGIDLSLPNVERLNLGLN 326 (827)
Q Consensus 256 ~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~n~-------l~~~~~~~~~~~l~~L~~L~L~~N 326 (827)
.+..|..+..++ +...+++++|++.+.++. .+.++++|+.+++++|. +.+.++ .+. .+++|+.|++++|
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~-~l~~L~~L~l~~~ 230 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQ-TNPKLSNLTLNNI 230 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGG-GCTTCCEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhc-cccchhhcccccc
Confidence 788888887766 344677888888776654 56778889999998887 666555 333 6888999999888
Q ss_pred ccccccCcccc---CCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccC-ccccC
Q 047196 327 RFSGTIPSFIT---NASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIP-QLISN 402 (827)
Q Consensus 327 ~l~~~~p~~~~---~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p-~~~~~ 402 (827)
.+++..+..+. ..++|++|++++|+++|.+|..+... ....+. +|+.+++++|.+ .+| ..+..
T Consensus 231 ~l~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~----------~~~~l~-~L~~l~l~~n~~--~~p~~~~~~ 297 (520)
T 2z7x_B 231 ETTWNSFIRILQLVWHTTVWYFSISNVKLQGQLDFRDFDY----------SGTSLK-ALSIHQVVSDVF--GFPQSYIYE 297 (520)
T ss_dssp EEEHHHHHHHHHHHHTSSCSEEEEEEEEEESCCCCCCCCC----------CSCCCC-EEEEEEEEECCC--CSCTHHHHH
T ss_pred ccCHHHHHHHHHHhhhCcccEEEeecccccCccccchhhc----------ccccCc-eeEeccccccce--ecchhhhhc
Confidence 88764332221 24588999999988887766533100 003343 788899999998 555 45554
Q ss_pred C---CCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccc--cCCccccCCCC
Q 047196 403 L---SNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSG--SIPSCLGNLTS 477 (827)
Q Consensus 403 l---~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~ 477 (827)
+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|..+.++++|++|++++|++++ .+|..+..+++
T Consensus 298 ~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~ 375 (520)
T 2z7x_B 298 IFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKS 375 (520)
T ss_dssp HHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTT
T ss_pred ccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCC
Confidence 4 67999999999886432 12688999999999999999899999999999999999999986 56778899999
Q ss_pred CCccccCCCcccccCCc-cccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECC
Q 047196 478 LRSPDLGSNRLTSVLPS-TFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLA 556 (827)
Q Consensus 478 L~~L~Ls~N~l~~~~p~-~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls 556 (827)
|++||+++|.+++.+|. .+..+++|+.|++++|.+++.+|..+. +.|+.|++++|+|+ .+|..+..+++|+.|+|+
T Consensus 376 L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~ 452 (520)
T 2z7x_B 376 LQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVA 452 (520)
T ss_dssp CCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECC
T ss_pred CCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECC
Confidence 99999999999985555 488889999999999999988887765 78999999999998 888888899999999999
Q ss_pred CCcceeecCCC-C---cCCceEeCcCCcCeecCC
Q 047196 557 CNGLEGLIPES-F---GYLTELNLSFNKLEGEIP 586 (827)
Q Consensus 557 ~N~l~g~ip~~-~---~~L~~L~ls~N~l~g~ip 586 (827)
+|++++ +|.. + .+|+.|++++|++++..+
T Consensus 453 ~N~l~~-l~~~~~~~l~~L~~L~l~~N~~~c~c~ 485 (520)
T 2z7x_B 453 SNQLKS-VPDGIFDRLTSLQKIWLHTNPWDCSCP 485 (520)
T ss_dssp SSCCCC-CCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcCCc-cCHHHhccCCcccEEECcCCCCcccCC
Confidence 999985 5543 4 478899999999987654
No 20
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=100.00 E-value=9.6e-47 Score=436.64 Aligned_cols=452 Identities=17% Similarity=0.200 Sum_probs=387.4
Q ss_pred CEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeec
Q 047196 125 TTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAK 204 (827)
Q Consensus 125 ~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~ 204 (827)
++||+++|+++ .+|..+. ++|++|||++|.+++..|..+.++++|++|+|++|++++..|..+.. +++|++|+|++
T Consensus 3 ~~l~ls~n~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~-l~~L~~L~Ls~ 78 (520)
T 2z7x_B 3 FLVDRSKNGLI-HVPKDLS--QKTTILNISQNYISELWTSDILSLSKLRILIISHNRIQYLDISVFKF-NQELEYLDLSH 78 (520)
T ss_dssp CEEECTTSCCS-SCCCSCC--TTCSEEECCSSCCCCCCHHHHTTCTTCCEEECCSSCCCEEEGGGGTT-CTTCCEEECCS
T ss_pred ceEecCCCCcc-ccccccc--ccccEEECCCCcccccChhhccccccccEEecCCCccCCcChHHhhc-ccCCCEEecCC
Confidence 68999999999 6887776 89999999999999999999999999999999999999766666655 55999999999
Q ss_pred ccccccCCccCCCCCCCcEEEccCCCCcc-cCCCcCcCCccccEEEcccccccccccccccCcCCC--cEEEeecccC--
Q 047196 205 NMFHGQIPLALSKCKRLQLLNLGFKKLSG-AIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNL--ENLVLGFNNL-- 279 (827)
Q Consensus 205 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l-- 279 (827)
|+++ .+|.. .+++|++|++++|.+++ .+|..++++++|++|++++|++++ ..+..+++| ++|++++|.+
T Consensus 79 N~l~-~lp~~--~l~~L~~L~L~~N~l~~~~~p~~~~~l~~L~~L~L~~n~l~~---~~~~~l~~L~L~~L~l~~n~l~~ 152 (520)
T 2z7x_B 79 NKLV-KISCH--PTVNLKHLDLSFNAFDALPICKEFGNMSQLKFLGLSTTHLEK---SSVLPIAHLNISKVLLVLGETYG 152 (520)
T ss_dssp SCCC-EEECC--CCCCCSEEECCSSCCSSCCCCGGGGGCTTCCEEEEEESSCCG---GGGGGGTTSCEEEEEEEECTTTT
T ss_pred Ccee-ecCcc--ccCCccEEeccCCccccccchhhhccCCcceEEEecCcccch---hhccccccceeeEEEeecccccc
Confidence 9998 56666 89999999999999998 578999999999999999999986 467778888 9999999999
Q ss_pred cccCchhhhcCC-CccEEEecCCccccccChhhhcCCCCccEEeCcCCc-------cccccCccccCCCCCcEEEcCCCc
Q 047196 280 VGVVPAAIFNMS-TVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNR-------FSGTIPSFITNASKLVYLDMGTNS 351 (827)
Q Consensus 280 ~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~-------l~~~~p~~~~~l~~L~~L~Ls~N~ 351 (827)
.+..|..+..+. ....+++++|.+.+.++......+++|+.|++++|. +.+.+| .+..+++|+.|++++|.
T Consensus 153 ~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~l~~l~~L~~L~l~~~~ 231 (520)
T 2z7x_B 153 EKEDPEGLQDFNTESLHIVFPTNKEFHFILDVSVKTVANLELSNIKCVLEDNKCSYFLSILA-KLQTNPKLSNLTLNNIE 231 (520)
T ss_dssp SSCCTTTTTTCCEEEEEEECCSSSCCCCCCCCCCTTCSEEEECCEEECCSTTTTHHHHHHHH-GGGGCTTCCEEEEEEEE
T ss_pred cccccccccccccceEEEEeccCcchhhhhhhhhhcccceeeccccccccccccceeecchh-hhccccchhhccccccc
Confidence 888898888776 455778899999988887666689999999999998 888777 78999999999999998
Q ss_pred ceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccc-----cCCCCCceEeccCcccccccc-cccc
Q 047196 352 FSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLI-----SNLSNLLLLDLEGNKLTGSIP-VTFG 425 (827)
Q Consensus 352 l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g~~p-~~~~ 425 (827)
+++..+.. . +.... . .+|++|++++|+++|.+|..+ ..+++|+.+++++|.+ .+| ..+.
T Consensus 232 l~~~~~~~----------~-~~~~~-~-~~L~~L~l~~n~l~~~~p~~~~~~~~~~l~~L~~l~l~~n~~--~~p~~~~~ 296 (520)
T 2z7x_B 232 TTWNSFIR----------I-LQLVW-H-TTVWYFSISNVKLQGQLDFRDFDYSGTSLKALSIHQVVSDVF--GFPQSYIY 296 (520)
T ss_dssp EEHHHHHH----------H-HHHHH-T-SSCSEEEEEEEEEESCCCCCCCCCCSCCCCEEEEEEEEECCC--CSCTHHHH
T ss_pred cCHHHHHH----------H-HHHhh-h-CcccEEEeecccccCccccchhhcccccCceeEeccccccce--ecchhhhh
Confidence 87542211 0 11111 1 279999999999999999998 9999999999999999 455 4555
Q ss_pred CC---CCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccc--cCCccccccc
Q 047196 426 RL---QKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTS--VLPSTFWNLK 500 (827)
Q Consensus 426 ~l---~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~ 500 (827)
.+ .+|+.|++++|.+.+.. .+..+++|++|++++|++++.+|..++.+++|++|++++|++++ .+|..+..++
T Consensus 297 ~~~~~~~L~~L~l~~n~l~~~~--~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~ 374 (520)
T 2z7x_B 297 EIFSNMNIKNFTVSGTRMVHML--CPSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMK 374 (520)
T ss_dssp HHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCT
T ss_pred cccccCceeEEEcCCCcccccc--chhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCC
Confidence 44 68999999999987532 12678999999999999999999999999999999999999997 5678899999
Q ss_pred cccccCCCCCCCCCCCccc-ccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCCC---cCCceEeC
Q 047196 501 DILFFDLSSNSLDGPLSLD-IGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF---GYLTELNL 576 (827)
Q Consensus 501 ~L~~LdLs~N~l~g~~p~~-~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~---~~L~~L~l 576 (827)
+|+.||+++|.+++.+|.. +..++.|+.|++++|++++.+|..+. ++|+.|++++|+++ .+|..+ .+|++|++
T Consensus 375 ~L~~L~Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L 451 (520)
T 2z7x_B 375 SLQQLDISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNV 451 (520)
T ss_dssp TCCEEECCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEEC
T ss_pred CCCEEECCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEEC
Confidence 9999999999999977765 88899999999999999999998876 79999999999999 677644 58999999
Q ss_pred cCCcCeecCCCC--CCCCCCcccccccCccccCC
Q 047196 577 SFNKLEGEIPRG--GPFANFTAKSFMGNEKLCGL 608 (827)
Q Consensus 577 s~N~l~g~ip~~--~~~~~~~~~~~~~n~~lc~~ 608 (827)
++|+++ .+|.. ..+..+....+.+|+..|.+
T Consensus 452 ~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 484 (520)
T 2z7x_B 452 ASNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSC 484 (520)
T ss_dssp CSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCCcCC-ccCHHHhccCCcccEEECcCCCCcccC
Confidence 999999 57764 34556667778899887753
No 21
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=2.5e-44 Score=426.53 Aligned_cols=476 Identities=20% Similarity=0.159 Sum_probs=255.7
Q ss_pred cEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcC
Q 047196 99 RVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLD 178 (827)
Q Consensus 99 ~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~ 178 (827)
.++.|||++|+|++..+.+|.++++|++|||++|+|++..|.+|.++++|++|||++|+|++..+..|.++++|++|+|+
T Consensus 53 ~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls 132 (635)
T 4g8a_A 53 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 132 (635)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECT
T ss_pred CCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECC
Confidence 57788888888877777778888888888888888877767777888888888888888877666777788888888888
Q ss_pred CCCCCCCcchhHhhccccccEEEeecccccc-cCCccCCCCCCCcEEEccCCCCcccCCCcCcCCcccc----EEEcccc
Q 047196 179 SDKLSGELPVNICNYLHYLKVLFLAKNMFHG-QIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILR----KISLRNN 253 (827)
Q Consensus 179 ~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~----~L~Ls~N 253 (827)
+|++++ +|...+..+++|++|+|++|.+++ .+|..++++++|++|++++|++++..|..+..+.+++ .++++.|
T Consensus 133 ~N~l~~-l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n 211 (635)
T 4g8a_A 133 ETNLAS-LENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLN 211 (635)
T ss_dssp TSCCCC-STTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTC
T ss_pred CCcCCC-CChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCccccccccccccchhhhhhhhhhhhcccC
Confidence 887774 554444445578888888887765 4567777778888888888887777777766655443 5777777
Q ss_pred cccccccccccCcCCCcEEEeecccCcccC-chhhhcCCCccEEEecCCcccccc------Chh----------------
Q 047196 254 KLRGEIPHEIGYLPNLENLVLGFNNLVGVV-PAAIFNMSTVKKIYLLDNSLLGSF------SLG---------------- 310 (827)
Q Consensus 254 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~-p~~~~~l~~L~~L~l~~n~l~~~~------~~~---------------- 310 (827)
.++...+..+ ....++.+++..|.....+ +..+..+..++...+..+...+.. ...
T Consensus 212 ~l~~i~~~~~-~~~~~~~l~l~~n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~ 290 (635)
T 4g8a_A 212 PMNFIQPGAF-KEIRLHKLTLRNNFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAY 290 (635)
T ss_dssp CCCEECTTTT-TTCEEEEEEEESCCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEEC
T ss_pred cccccCcccc-cchhhhhhhhhcccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhh
Confidence 7765444333 3445667777777655332 344556666665555332211100 000
Q ss_pred ----------hhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCc------cCCCCCCcccCCCc
Q 047196 311 ----------IDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTI------GLTGNPLDGVLPTS 374 (827)
Q Consensus 311 ----------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~------~l~~n~l~g~~p~~ 374 (827)
......+++.+++..+.+.... .+.....|+.|++.+|.+.+..+..+ .+..|..... ..
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~--~~~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~--~~ 366 (635)
T 4g8a_A 291 LDYYLDGIIDLFNCLTNVSSFSLVSVTIERVK--DFSYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNA--FS 366 (635)
T ss_dssp CCSCEEECTTTTGGGTTCSEEEEESCEEEECG--GGGSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCB--CC
T ss_pred hcccccchhhhhhhhccccccccccccccccc--ccccchhhhhhhcccccccCcCcccchhhhhcccccccCCCC--cc
Confidence 0012234455555555544322 23444566666666666554332211 0111111111 11
Q ss_pred hhcccccccEEEccCCcCcc--ccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCC-cccccc
Q 047196 375 IGNLSMSLENIYISNCNIGG--SIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIP-DQLCHL 451 (827)
Q Consensus 375 ~~~~~~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l 451 (827)
...++ +|+.+++++|.+.. ..+..+..+.+|+.++++.|.+.+ .+..+..+++|+.++++.|......+ ..+..+
T Consensus 367 ~~~l~-~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l 444 (635)
T 4g8a_A 367 EVDLP-SLEFLDLSRNGLSFKGCCSQSDFGTISLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSL 444 (635)
T ss_dssp CCBCT-TCCEEECCSSCCBEEEECCHHHHSCSCCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTC
T ss_pred ccccc-ccccchhhccccccccccccchhhhhhhhhhhcccccccc-ccccccccccccchhhhhccccccccccccccc
Confidence 11222 34444444444431 233333444444444444444432 22334444444444444444333222 233444
Q ss_pred ccccEEecCCCcccccCCccccCCCCCCccccCCCcc-cccCCccccccccccccCCCCCCCCCCCcccccccccCceEE
Q 047196 452 ARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRL-TSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGIN 530 (827)
Q Consensus 452 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l-~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~ 530 (827)
.+++.+++++|++.+..|..+..++.|+.|++++|.+ .+.+|..|..+++|++|||++|++++.+|..|+++++|+.|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 4444444444444444444444444444444444442 223344444444444444444444444444444444444444
Q ss_pred cccceeeecccccccCCCCCCEEECCCCcceeecCCCCc----CCceEeCcCCcCe
Q 047196 531 LSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESFG----YLTELNLSFNKLE 582 (827)
Q Consensus 531 Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~----~L~~L~ls~N~l~ 582 (827)
|++|+|++..|..|+++++|+.|||++|+|++.+|..+. +|+.|++++|+++
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~ 580 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFA 580 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBC
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCc
Confidence 444444444444444444444444444444444444332 3444444444443
No 22
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=3e-44 Score=419.47 Aligned_cols=455 Identities=20% Similarity=0.194 Sum_probs=362.8
Q ss_pred EEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCC
Q 047196 101 TALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSD 180 (827)
Q Consensus 101 ~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n 180 (827)
+.+|++++++++ +|..+. ++|++|||++|.+++..|.+|.++++|++|+|++|++++..|..+.++++|++|+|++|
T Consensus 34 ~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 110 (562)
T 3a79_B 34 SMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHN 110 (562)
T ss_dssp CEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTS
T ss_pred cEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCC
Confidence 789999999996 676654 89999999999999888889999999999999999999988999999999999999999
Q ss_pred CCCCCcchhHhhccccccEEEeecccccc-cCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccc--cEEEcccccc--
Q 047196 181 KLSGELPVNICNYLHYLKVLFLAKNMFHG-QIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTIL--RKISLRNNKL-- 255 (827)
Q Consensus 181 ~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~-~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L--~~L~Ls~N~l-- 255 (827)
.++ .+|.. .+++|++|+|++|++++ .+|..|+++++|++|++++|.+++. .+..+++| ++|++++|++
T Consensus 111 ~l~-~lp~~---~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l~~ 183 (562)
T 3a79_B 111 RLQ-NISCC---PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSYHI 183 (562)
T ss_dssp CCC-EECSC---CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSCCC
T ss_pred cCC-ccCcc---ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccccc
Confidence 998 68877 46799999999999987 4678999999999999999999863 45555666 9999999999
Q ss_pred cccccccccCcC--CCcEEEeecccCcccCch-hhhcCCCccEEEecCCcc-----ccccChhhhcCCCCccEEeCcCCc
Q 047196 256 RGEIPHEIGYLP--NLENLVLGFNNLVGVVPA-AIFNMSTVKKIYLLDNSL-----LGSFSLGIDLSLPNVERLNLGLNR 327 (827)
Q Consensus 256 ~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~l~~n~l-----~~~~~~~~~~~l~~L~~L~L~~N~ 327 (827)
++..|..+..++ .| .++++.|.+.+.++. .+.++++|+.+++++|.. .+.+ ..+ ..+++|+.++++++.
T Consensus 184 ~~~~~~~l~~l~~~~l-~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~-~~l-~~l~~L~~L~L~~~~ 260 (562)
T 3a79_B 184 KGGETESLQIPNTTVL-HLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL-SEL-TRGPTLLNVTLQHIE 260 (562)
T ss_dssp CSSSCCEEEECCEEEE-EEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH-HHH-HSCSSCEEEEEEEEE
T ss_pred cccCcccccccCcceE-EEEecCccchhhhhhhcccccceEEEecccccccccchHHHHH-HHH-hccCcceEEEecCCc
Confidence 888898888765 33 568889998886654 456788999999999852 2222 122 267888888888877
Q ss_pred ccccc----CccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccC-ccccC
Q 047196 328 FSGTI----PSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIP-QLISN 402 (827)
Q Consensus 328 l~~~~----p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p-~~~~~ 402 (827)
+++.. +..+ ..++|++|++++|.++|.+|..+... ....+. .|+.++++.|.+ .+| ..+..
T Consensus 261 l~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~ip~~~~~~----------~~~~L~-~L~~~~~~~~~~--~~p~~~~~~ 326 (562)
T 3a79_B 261 TTWKCSVKLFQFF-WPRPVEYLNIYNLTITERIDREEFTY----------SETALK-SLMIEHVKNQVF--LFSKEALYS 326 (562)
T ss_dssp ECHHHHHHHHHHH-TTSSEEEEEEEEEEECSCCCCCCCCC----------CSCSCC-EEEEEEEEECCC--SSCHHHHHH
T ss_pred CcHHHHHHHHHhh-hcccccEEEEeccEeeccccchhhhc----------ccccch-heehhhccccee--ecChhhhhh
Confidence 66432 2222 23589999999999988777542100 002222 566666777776 445 22222
Q ss_pred ---CCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccc--cCCccccCCCC
Q 047196 403 ---LSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSG--SIPSCLGNLTS 477 (827)
Q Consensus 403 ---l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~--~~p~~~~~l~~ 477 (827)
..+|+.|++++|.+.... ....+++|++|++++|++++.+|..+.++++|++|++++|++++ .+|..+..+++
T Consensus 327 ~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~ 404 (562)
T 3a79_B 327 VFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSS 404 (562)
T ss_dssp HHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTT
T ss_pred hhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCC
Confidence 267999999999886432 12688999999999999999899999999999999999999986 34577899999
Q ss_pred CCccccCCCcccccCCc-cccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECC
Q 047196 478 LRSPDLGSNRLTSVLPS-TFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLA 556 (827)
Q Consensus 478 L~~L~Ls~N~l~~~~p~-~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls 556 (827)
|++|++++|.+++.+|. .+..+++|+.|++++|++++.+|..+. +.|+.|++++|+|+ .+|..+..+++|+.|+|+
T Consensus 405 L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~ 481 (562)
T 3a79_B 405 LETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNVA 481 (562)
T ss_dssp CCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEECC
T ss_pred CCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEECC
Confidence 99999999999985554 588899999999999999988887665 78999999999998 788888899999999999
Q ss_pred CCcceeecCCCC---cCCceEeCcCCcCeecCCC
Q 047196 557 CNGLEGLIPESF---GYLTELNLSFNKLEGEIPR 587 (827)
Q Consensus 557 ~N~l~g~ip~~~---~~L~~L~ls~N~l~g~ip~ 587 (827)
+|++++..+..+ .+|+.|++++|++++..|.
T Consensus 482 ~N~l~~l~~~~~~~l~~L~~L~l~~N~~~c~c~~ 515 (562)
T 3a79_B 482 SNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 515 (562)
T ss_dssp SSCCCCCCTTSTTTCTTCCCEECCSCCBCCCHHH
T ss_pred CCCCCCCCHHHHhcCCCCCEEEecCCCcCCCcch
Confidence 999995433324 4788999999999887663
No 23
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=100.00 E-value=7e-43 Score=414.06 Aligned_cols=445 Identities=19% Similarity=0.180 Sum_probs=341.5
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRL 177 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 177 (827)
.+++.|||++|+|++..+.+|.+|++|++|+|++|+|++..|..|.++++|++|+|++|++++..+..+.++++|++|+|
T Consensus 76 ~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~L 155 (635)
T 4g8a_A 76 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 155 (635)
T ss_dssp TTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeecc
Confidence 47999999999999988889999999999999999999877788999999999999999999988888999999999999
Q ss_pred CCCCCCC-CcchhHhhccccccEEEeecccccccCCccCCCCCCC----cEEEccCCCCcccCCCcCcCCccccEEEccc
Q 047196 178 DSDKLSG-ELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRL----QLLNLGFKKLSGAIPKEISNLTILRKISLRN 252 (827)
Q Consensus 178 ~~n~l~g-~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L----~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~ 252 (827)
++|.+++ .+|..+.. +++|++|++++|++++..|..+..+.++ ..++++.|.++...+..+. ...++.+++++
T Consensus 156 s~N~l~~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~~i~~~~~~-~~~~~~l~l~~ 233 (635)
T 4g8a_A 156 AHNLIQSFKLPEYFSN-LTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFK-EIRLHKLTLRN 233 (635)
T ss_dssp CSSCCCCCCCCGGGGG-CTTCCEEECCSSCCCEECGGGGHHHHTCTTCCCEEECTTCCCCEECTTTTT-TCEEEEEEEES
T ss_pred ccCccccCCCchhhcc-chhhhhhcccCccccccccccccchhhhhhhhhhhhcccCcccccCccccc-chhhhhhhhhc
Confidence 9999976 34555444 5699999999999999988888766554 4789999999876665554 44577888888
Q ss_pred ccccccc-cccccCcCCCcEEEeecccCc---------------------------------ccCchhhhcCCCccEEEe
Q 047196 253 NKLRGEI-PHEIGYLPNLENLVLGFNNLV---------------------------------GVVPAAIFNMSTVKKIYL 298 (827)
Q Consensus 253 N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~---------------------------------~~~p~~~~~l~~L~~L~l 298 (827)
|..+..+ +..+..++.++...+..+... ..++..+..+.+++.+.+
T Consensus 234 n~~~~~~~~~~~~~l~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~l~~l~~ 313 (635)
T 4g8a_A 234 NFDSLNVMKTCIQGLAGLEVHRLVLGEFRNEGNLEKFDKSALEGLCNLTIEEFRLAYLDYYLDGIIDLFNCLTNVSSFSL 313 (635)
T ss_dssp CCSSHHHHHHHHHTTTTCEEEEEEEECCTTSCCCSCCCTTTTGGGGGSEEEEEEEECCCSCEEECTTTTGGGTTCSEEEE
T ss_pred ccccccccchhhcCCcccccccccccccccccccccccccccccccchhhhhhhhhhhcccccchhhhhhhhcccccccc
Confidence 7654322 223344444443333221110 011112223334444444
Q ss_pred cCCccccccChhhhcCCCCccEEeCcCCccccccC-------------------ccccCCCCCcEEEcCCCcceeecCCC
Q 047196 299 LDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIP-------------------SFITNASKLVYLDMGTNSFSGIIPNT 359 (827)
Q Consensus 299 ~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-------------------~~~~~l~~L~~L~Ls~N~l~g~~p~~ 359 (827)
.++.+.+..+. ....+++.|++.+|++.+..+ .....+++|+.|+++.|.+...
T Consensus 314 ~~~~~~~~~~~---~~~~~L~~L~l~~~~~~~~~~~~l~~L~~l~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~~---- 386 (635)
T 4g8a_A 314 VSVTIERVKDF---SYNFGWQHLELVNCKFGQFPTLKLKSLKRLTFTSNKGGNAFSEVDLPSLEFLDLSRNGLSFK---- 386 (635)
T ss_dssp ESCEEEECGGG---GSCCCCSEEEEESCEESSCCCCBCTTCCEEEEESCCSCCBCCCCBCTTCCEEECCSSCCBEE----
T ss_pred ccccccccccc---ccchhhhhhhcccccccCcCcccchhhhhcccccccCCCCcccccccccccchhhccccccc----
Confidence 44443322111 122344444444444433221 1233456666666666655432
Q ss_pred ccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCcccccccc-ccccCCCCCcEEECCCC
Q 047196 360 IGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIP-VTFGRLQKLQGLYLPFN 438 (827)
Q Consensus 360 ~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N 438 (827)
+..+....... +++.+++..|.+.+ ++..+..+++|+.++++.|+.....+ ..|..+++++.++++.|
T Consensus 387 ---------~~~~~~~~~~~-~L~~L~~~~~~~~~-~~~~~~~l~~L~~l~l~~~~~~~~~~~~~~~~l~~l~~l~ls~n 455 (635)
T 4g8a_A 387 ---------GCCSQSDFGTI-SLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHT 455 (635)
T ss_dssp ---------EECCHHHHSCS-CCCEEECCSCSEEE-ECSCCTTCTTCCEEECTTSEEESTTSSCTTTTCTTCCEEECTTS
T ss_pred ---------cccccchhhhh-hhhhhhcccccccc-ccccccccccccchhhhhcccccccccccccccccccccccccc
Confidence 12233344444 79999999999875 55668889999999999998877665 45789999999999999
Q ss_pred CCCCCCCccccccccccEEecCCCccc-ccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCc
Q 047196 439 KLAGSIPDQLCHLARLNTLGLAGNKFS-GSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLS 517 (827)
Q Consensus 439 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p 517 (827)
.+.+..|..+..++.|+.|++++|++. +.+|..+..+++|++|||++|++++..|..|.++++|++|+|++|+|++..|
T Consensus 456 ~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~Ls~N~l~~l~~ 535 (635)
T 4g8a_A 456 HTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDT 535 (635)
T ss_dssp CCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCBCCC
T ss_pred ccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEECCCCcCCCCCh
Confidence 999999999999999999999999854 4678899999999999999999999999999999999999999999999999
Q ss_pred ccccccccCceEEcccceeeecccccccCC-CCCCEEECCCCccee
Q 047196 518 LDIGNLRVVIGINLSRNNFSGDIPSTIGDL-KDLQNISLACNGLEG 562 (827)
Q Consensus 518 ~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l-~~L~~L~Ls~N~l~g 562 (827)
..++++++|+.|||++|+|++.+|..+..+ ++|+.|+|++|.++-
T Consensus 536 ~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C 581 (635)
T 4g8a_A 536 FPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 581 (635)
T ss_dssp GGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCC
T ss_pred hHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCcc
Confidence 999999999999999999999999999998 689999999999864
No 24
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=100.00 E-value=9.3e-44 Score=415.34 Aligned_cols=454 Identities=19% Similarity=0.183 Sum_probs=372.7
Q ss_pred CCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEe
Q 047196 123 SLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFL 202 (827)
Q Consensus 123 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~L 202 (827)
..+++|+++|++++ +|..+. ++|++|||++|.+++..|..+.++++|++|+|++|.+++..|..+.. +++|++|+|
T Consensus 32 ~~~~l~ls~~~L~~-ip~~~~--~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L 107 (562)
T 3a79_B 32 LESMVDYSNRNLTH-VPKDLP--PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLF-NQDLEYLDV 107 (562)
T ss_dssp -CCEEECTTSCCCS-CCTTSC--TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTT-CTTCCEEEC
T ss_pred CCcEEEcCCCCCcc-CCCCCC--CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCC-CCCCCEEEC
Confidence 34899999999995 787664 89999999999999999999999999999999999999655555544 569999999
Q ss_pred ecccccccCCccCCCCCCCcEEEccCCCCcc-cCCCcCcCCccccEEEcccccccccccccccCcCCC--cEEEeecccC
Q 047196 203 AKNMFHGQIPLALSKCKRLQLLNLGFKKLSG-AIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNL--ENLVLGFNNL 279 (827)
Q Consensus 203 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L--~~L~Ls~N~l 279 (827)
++|.++ .+|.. .+++|++|++++|++++ .+|..|+++++|++|++++|++++. .+..+++| ++|++++|.+
T Consensus 108 s~N~l~-~lp~~--~l~~L~~L~Ls~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~---~~~~l~~L~L~~L~L~~n~l 181 (562)
T 3a79_B 108 SHNRLQ-NISCC--PMASLRHLDLSFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL---DLLPVAHLHLSCILLDLVSY 181 (562)
T ss_dssp TTSCCC-EECSC--CCTTCSEEECCSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT---TTGGGTTSCEEEEEEEESSC
T ss_pred CCCcCC-ccCcc--ccccCCEEECCCCCccccCchHhhcccCcccEEecCCCccccC---chhhhhhceeeEEEeecccc
Confidence 999998 56766 89999999999999997 4578999999999999999999863 45666666 9999999999
Q ss_pred --cccCchhhhcCC-CccEEEecCCccccccChhhhcCCCCccEEeCcCCc-----cccccCccccCCCCCcEEEcCCCc
Q 047196 280 --VGVVPAAIFNMS-TVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNR-----FSGTIPSFITNASKLVYLDMGTNS 351 (827)
Q Consensus 280 --~~~~p~~~~~l~-~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~-----l~~~~p~~~~~l~~L~~L~Ls~N~ 351 (827)
++..|..+..+. ....+++++|.+.+.++......+++|+.+++++|+ +.+.+ ..+..+++|+.++++++.
T Consensus 182 ~~~~~~~~~l~~l~~~~l~l~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~~l~~~~-~~l~~l~~L~~L~L~~~~ 260 (562)
T 3a79_B 182 HIKGGETESLQIPNTTVLHLVFHPNSLFSVQVNMSVNALGHLQLSNIKLNDENCQRLMTFL-SELTRGPTLLNVTLQHIE 260 (562)
T ss_dssp CCCSSSCCEEEECCEEEEEEEECSSSCCCCCCEEEESSEEEEEEEEEECCSTTHHHHHHHH-HHHHSCSSCEEEEEEEEE
T ss_pred cccccCcccccccCcceEEEEecCccchhhhhhhcccccceEEEecccccccccchHHHHH-HHHhccCcceEEEecCCc
Confidence 898998888765 233668899999888777666678899999999985 33332 357788999999998887
Q ss_pred ceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccc-----cCCCCCceEeccCcccccccc-cccc
Q 047196 352 FSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLI-----SNLSNLLLLDLEGNKLTGSIP-VTFG 425 (827)
Q Consensus 352 l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~-----~~l~~L~~L~Ls~N~l~g~~p-~~~~ 425 (827)
+++... .+ ++..+. . .+|++|++++|+++|.+|..+ .+++.|+.++++.|.+ .+| ..+.
T Consensus 261 l~~~~~----------~~-~~~~~~-~-~~L~~L~l~~n~l~~~ip~~~~~~~~~~L~~L~~~~~~~~~~--~~p~~~~~ 325 (562)
T 3a79_B 261 TTWKCS----------VK-LFQFFW-P-RPVEYLNIYNLTITERIDREEFTYSETALKSLMIEHVKNQVF--LFSKEALY 325 (562)
T ss_dssp ECHHHH----------HH-HHHHHT-T-SSEEEEEEEEEEECSCCCCCCCCCCSCSCCEEEEEEEEECCC--SSCHHHHH
T ss_pred CcHHHH----------HH-HHHhhh-c-ccccEEEEeccEeeccccchhhhcccccchheehhhccccee--ecChhhhh
Confidence 654211 11 111111 1 279999999999999999987 7788888888888887 344 2332
Q ss_pred C---CCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCccccc--CCccccccc
Q 047196 426 R---LQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSV--LPSTFWNLK 500 (827)
Q Consensus 426 ~---l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~ 500 (827)
. ..+|+.|++++|.+.... ....+++|++|++++|++++.+|..++++++|++|++++|++++. +|..+.+++
T Consensus 326 ~~~~~~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~ 403 (562)
T 3a79_B 326 SVFAEMNIKMLSISDTPFIHMV--CPPSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMS 403 (562)
T ss_dssp HHHHTCCCSEEEEESSCCCCCC--CCSSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCT
T ss_pred hhhccCcceEEEccCCCccccc--CccCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCC
Confidence 2 267999999999986432 126789999999999999999999999999999999999999984 457789999
Q ss_pred cccccCCCCCCCCCCCcc-cccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCCC---cCCceEeC
Q 047196 501 DILFFDLSSNSLDGPLSL-DIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESF---GYLTELNL 576 (827)
Q Consensus 501 ~L~~LdLs~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~---~~L~~L~l 576 (827)
+|+.||+++|.+++.+|. .+..++.|+.|++++|++++.+|..+. ++|+.|+|++|+++ .+|..+ .+|+.|++
T Consensus 404 ~L~~L~l~~N~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L 480 (562)
T 3a79_B 404 SLETLDVSLNSLNSHAYDRTCAWAESILVLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIM-SIPKDVTHLQALQELNV 480 (562)
T ss_dssp TCCEEECTTSCCBSCCSSCCCCCCTTCCEEECCSSCCCGGGGSSCC--TTCSEEECCSSCCC-CCCTTTTSSCCCSEEEC
T ss_pred CCCEEECCCCcCCCccChhhhcCcccCCEEECCCCCCCcchhhhhc--CcCCEEECCCCcCc-ccChhhcCCCCCCEEEC
Confidence 999999999999996665 488899999999999999999888776 78999999999998 566544 48999999
Q ss_pred cCCcCeecCCCC--CCCCCCcccccccCccccCC
Q 047196 577 SFNKLEGEIPRG--GPFANFTAKSFMGNEKLCGL 608 (827)
Q Consensus 577 s~N~l~g~ip~~--~~~~~~~~~~~~~n~~lc~~ 608 (827)
++|+++ .+|.. ..+..+....+.+|+..|.+
T Consensus 481 ~~N~l~-~l~~~~~~~l~~L~~L~l~~N~~~c~c 513 (562)
T 3a79_B 481 ASNQLK-SVPDGVFDRLTSLQYIWLHDNPWDCTC 513 (562)
T ss_dssp CSSCCC-CCCTTSTTTCTTCCCEECCSCCBCCCH
T ss_pred CCCCCC-CCCHHHHhcCCCCCEEEecCCCcCCCc
Confidence 999999 57764 45566677788999988864
No 25
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=8.3e-44 Score=383.53 Aligned_cols=293 Identities=27% Similarity=0.455 Sum_probs=224.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCcCCCCCCCCCCCCc--ccceecCCCC--CcEEEEEcCCCCCcc--ccCccccCCCCC
Q 047196 51 SNITTDQQALLALKAHISYDPTNLLAQNSTSNTSVCN--WIGITCNVNS--HRVTALNISSLNLQG--TIPPQLGNLSSL 124 (827)
Q Consensus 51 ~~~~~~~~aLl~~k~~~~~~~~~~l~~w~~~~~~~C~--W~gv~C~~~~--~~v~~L~L~~~~l~g--~~~~~l~~L~~L 124 (827)
.|.++|++||++||+++ .||. .+.+|. .+.|||. |.||+|+..+ ++|+.|+|+++++.| .+|+.+.++++|
T Consensus 2 ~c~~~~~~aL~~~k~~~-~~~~-~l~~W~-~~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L 78 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDL-GNPT-TLSSWL-PTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYL 78 (313)
T ss_dssp CSCHHHHHHHHHHHHHT-TCCG-GGTTCC-TTSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTC
T ss_pred CCCHHHHHHHHHHHHhc-CCcc-cccCCC-CCCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCC
Confidence 58899999999999998 5665 778897 5679998 9999998755 799999999999999 899999999999
Q ss_pred CEEECCC-CCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEee
Q 047196 125 TTLNLSH-NKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLA 203 (827)
Q Consensus 125 ~~L~Ls~-N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls 203 (827)
++|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..+.++++|++|++++|.+++.+|..+..+ ++|++|+++
T Consensus 79 ~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~L~L~ 157 (313)
T 1ogq_A 79 NFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSL-PNLVGITFD 157 (313)
T ss_dssp SEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGC-TTCCEEECC
T ss_pred CeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcC-CCCCeEECc
Confidence 9999995 99999999999999999999999999999988888888888888888887777777666553 477777777
Q ss_pred cccccccCCccCCCCC-CCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCccc
Q 047196 204 KNMFHGQIPLALSKCK-RLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGV 282 (827)
Q Consensus 204 ~N~l~~~~p~~l~~l~-~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 282 (827)
+|.+++.+|..+++++ +|++|++++|.+++.+|..+..++ |++|++++|++++..|..+..+++|++|+|++|++++.
T Consensus 158 ~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 236 (313)
T 1ogq_A 158 GNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFD 236 (313)
T ss_dssp SSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCB
T ss_pred CCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeee
Confidence 7777777777777776 777777777777777777777766 77777777777777777777777777777777777665
Q ss_pred CchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCc
Q 047196 283 VPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNS 351 (827)
Q Consensus 283 ~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 351 (827)
+|. +..+++|++|++++|.+.+.+|..+. .+++|++|++++|+++|.+|.. ..+++|+.+++++|.
T Consensus 237 ~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~-~l~~L~~L~Ls~N~l~~~ip~~-~~l~~L~~l~l~~N~ 302 (313)
T 1ogq_A 237 LGK-VGLSKNLNGLDLRNNRIYGTLPQGLT-QLKFLHSLNVSFNNLCGEIPQG-GNLQRFDVSAYANNK 302 (313)
T ss_dssp GGG-CCCCTTCCEEECCSSCCEECCCGGGG-GCTTCCEEECCSSEEEEECCCS-TTGGGSCGGGTCSSS
T ss_pred cCc-ccccCCCCEEECcCCcccCcCChHHh-cCcCCCEEECcCCcccccCCCC-ccccccChHHhcCCC
Confidence 554 45555555555555555555554443 4555555555555555555544 445555555555554
No 26
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=3.8e-43 Score=397.28 Aligned_cols=406 Identities=22% Similarity=0.301 Sum_probs=236.6
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhcccc-------------ceEEecCCCCCCcccc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKL-------------KFLDFSDNQLSGSLSS 164 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L-------------~~LdLs~N~l~g~~p~ 164 (827)
.+++.|++++|++ |.+|++++++++|++|++++|++.|.+|.+++++++| ++|++++|.+++. |.
T Consensus 11 ~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~l-p~ 88 (454)
T 1jl5_A 11 TFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PE 88 (454)
T ss_dssp ------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSCC-CS
T ss_pred ccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCccccC-CC
Confidence 4788899999988 8888889999999999999999988899888887765 8888888888763 32
Q ss_pred ccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCcc
Q 047196 165 VTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTI 244 (827)
Q Consensus 165 ~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 244 (827)
-.++|++|+++.|.+++ +|.. ..+|++|++++|.+++ +|.. .++|++|++++|++++ +| +++++++
T Consensus 89 ---~~~~L~~L~l~~n~l~~-lp~~----~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~~~~l~~ 154 (454)
T 1jl5_A 89 ---LPPHLESLVASCNSLTE-LPEL----PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-ELQNSSF 154 (454)
T ss_dssp ---CCTTCSEEECCSSCCSS-CCCC----CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-CCTTCTT
T ss_pred ---CcCCCCEEEccCCcCCc-cccc----cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-ccCCCCC
Confidence 13678888888888886 6643 2578888888888875 2221 1678888888888886 66 5888888
Q ss_pred ccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCc
Q 047196 245 LRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLG 324 (827)
Q Consensus 245 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~ 324 (827)
|++|++++|++++ +|..+ ++|++|++++|++++ +| .+.++++|+.|++++|.+.+ +|. ..++|++|+++
T Consensus 155 L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~~-l~~----~~~~L~~L~l~ 223 (454)
T 1jl5_A 155 LKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYADNNSLKK-LPD----LPLSLESIVAG 223 (454)
T ss_dssp CCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSS-CCC----CCTTCCEEECC
T ss_pred CCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEECCCCcCCc-CCC----CcCcccEEECc
Confidence 8888888888875 56543 478888888888887 45 57788888888888888765 332 23578888888
Q ss_pred CCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCC
Q 047196 325 LNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLS 404 (827)
Q Consensus 325 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~ 404 (827)
+|+++ .+|. ++.+++|++|++++|++++. |. . ..+|++|++++|++++ +|.. .+
T Consensus 224 ~n~l~-~lp~-~~~l~~L~~L~l~~N~l~~l-~~---------------~----~~~L~~L~l~~N~l~~-l~~~---~~ 277 (454)
T 1jl5_A 224 NNILE-ELPE-LQNLPFLTTIYADNNLLKTL-PD---------------L----PPSLEALNVRDNYLTD-LPEL---PQ 277 (454)
T ss_dssp SSCCS-SCCC-CTTCTTCCEEECCSSCCSSC-CS---------------C----CTTCCEEECCSSCCSC-CCCC---CT
T ss_pred CCcCC-cccc-cCCCCCCCEEECCCCcCCcc-cc---------------c----ccccCEEECCCCcccc-cCcc---cC
Confidence 88887 5664 77788888888888877642 21 1 1267788888888775 4443 36
Q ss_pred CCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccC
Q 047196 405 NLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLG 484 (827)
Q Consensus 405 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 484 (827)
+|+.|++++|++++. |.. .++|+.|++++|++++ ++.. .++|+.|++++|++++ +|.. +++|++|+++
T Consensus 278 ~L~~L~ls~N~l~~l-~~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L~~L~L~ 345 (454)
T 1jl5_A 278 SLTFLDVSENIFSGL-SEL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL---PPRLERLIAS 345 (454)
T ss_dssp TCCEEECCSSCCSEE-SCC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC---CTTCCEEECC
T ss_pred cCCEEECcCCccCcc-cCc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc---CCcCCEEECC
Confidence 777888888877762 211 2577777777777764 2211 1467777777777775 5543 4667777777
Q ss_pred CCcccccCCccccccccccccCCCCCCCCC--CCcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCccee
Q 047196 485 SNRLTSVLPSTFWNLKDILFFDLSSNSLDG--PLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEG 562 (827)
Q Consensus 485 ~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g 562 (827)
+|.+++ +|. .+++|++|++++|++++ .+|.+++. ++.|++.|.+|.. +++|+.||+++|++++
T Consensus 346 ~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~---~~~L~~L~ls~N~l~~ 410 (454)
T 1jl5_A 346 FNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPEL---PQNLKQLHVETNPLRE 410 (454)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC---------------------------
T ss_pred CCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccc---cCcCCEEECCCCcCCc
Confidence 777774 444 35667777777777776 56655432 3346666666653 3566777777777766
Q ss_pred --ecCCCCcCCceEeCcCCcCeecCC
Q 047196 563 --LIPESFGYLTELNLSFNKLEGEIP 586 (827)
Q Consensus 563 --~ip~~~~~L~~L~ls~N~l~g~ip 586 (827)
.+|.+ ++.|.+++|.+.+.+|
T Consensus 411 ~~~iP~s---l~~L~~~~~~~~~~~~ 433 (454)
T 1jl5_A 411 FPDIPES---VEDLRMNSERVVDPYE 433 (454)
T ss_dssp --------------------------
T ss_pred cccchhh---HhheeCcCcccCCccc
Confidence 55543 3445566666665554
No 27
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=100.00 E-value=1.4e-42 Score=392.72 Aligned_cols=396 Identities=21% Similarity=0.246 Sum_probs=215.5
Q ss_pred ccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCC-------------cEEEcCCCCC
Q 047196 116 PQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSV-------------LDIRLDSDKL 182 (827)
Q Consensus 116 ~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L-------------~~L~L~~n~l 182 (827)
+.-...++|++|++++|.+ |.+|++++++++|++|++++|.++|.+|..++++.+| ++|++++|.+
T Consensus 5 p~~~~~~~L~~L~l~~n~l-~~iP~~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l 83 (454)
T 1jl5_A 5 PRNVSNTFLQEPLRHSSNL-TEMPVEAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGL 83 (454)
T ss_dssp ------------------------------CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCC
T ss_pred ccccccccchhhhcccCch-hhCChhHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcc
Confidence 3334568999999999999 8999999999999999999999999999999998875 7777777777
Q ss_pred CCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEccccccccccccc
Q 047196 183 SGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHE 262 (827)
Q Consensus 183 ~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 262 (827)
++ +|. ..++|++|++++|.+++ +|.. +++|++|++++|.+++ +|.. .++|++|++++|++++ +| +
T Consensus 84 ~~-lp~----~~~~L~~L~l~~n~l~~-lp~~---~~~L~~L~l~~n~l~~-l~~~---~~~L~~L~L~~n~l~~-lp-~ 148 (454)
T 1jl5_A 84 SS-LPE----LPPHLESLVASCNSLTE-LPEL---PQSLKSLLVDNNNLKA-LSDL---PPLLEYLGVSNNQLEK-LP-E 148 (454)
T ss_dssp SC-CCS----CCTTCSEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CCSC---CTTCCEEECCSSCCSS-CC-C
T ss_pred cc-CCC----CcCCCCEEEccCCcCCc-cccc---cCCCcEEECCCCccCc-ccCC---CCCCCEEECcCCCCCC-Cc-c
Confidence 75 443 12467777777777776 5543 3677777777777764 2221 1567777777777775 56 4
Q ss_pred ccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCC
Q 047196 263 IGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKL 342 (827)
Q Consensus 263 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 342 (827)
++.+++|++|++++|++++ +|..+ .+|++|++++|.+.+ +| .+ ..+++|++|++++|++++ +|... ++|
T Consensus 149 ~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~-~~l~~L~~L~l~~N~l~~-l~~~~---~~L 217 (454)
T 1jl5_A 149 LQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-EL-QNLPFLTAIYADNNSLKK-LPDLP---LSL 217 (454)
T ss_dssp CTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CC-TTCTTCCEEECCSSCCSS-CCCCC---TTC
T ss_pred cCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cc-cCCCCCCEEECCCCcCCc-CCCCc---Ccc
Confidence 7777777777777777775 44332 366777777776665 44 23 256677777777777665 33322 466
Q ss_pred cEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccc
Q 047196 343 VYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPV 422 (827)
Q Consensus 343 ~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 422 (827)
++|++++|.++ .+|. ++.++ +|++|++++|++++ +|.. +++|+.|++++|++++ +|.
T Consensus 218 ~~L~l~~n~l~-~lp~----------------~~~l~-~L~~L~l~~N~l~~-l~~~---~~~L~~L~l~~N~l~~-l~~ 274 (454)
T 1jl5_A 218 ESIVAGNNILE-ELPE----------------LQNLP-FLTTIYADNNLLKT-LPDL---PPSLEALNVRDNYLTD-LPE 274 (454)
T ss_dssp CEEECCSSCCS-SCCC----------------CTTCT-TCCEEECCSSCCSS-CCSC---CTTCCEEECCSSCCSC-CCC
T ss_pred cEEECcCCcCC-cccc----------------cCCCC-CCCEEECCCCcCCc-cccc---ccccCEEECCCCcccc-cCc
Confidence 67777666655 2221 22333 67777777777764 3432 3567777777777765 343
Q ss_pred cccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccc
Q 047196 423 TFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDI 502 (827)
Q Consensus 423 ~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 502 (827)
. +++|+.|++++|++++ +|.. .++|+.|++++|++++ ++.. .++|++|++++|++++ +|.. +++|
T Consensus 275 ~---~~~L~~L~ls~N~l~~-l~~~---~~~L~~L~l~~N~l~~-i~~~---~~~L~~L~Ls~N~l~~-lp~~---~~~L 339 (454)
T 1jl5_A 275 L---PQSLTFLDVSENIFSG-LSEL---PPNLYYLNASSNEIRS-LCDL---PPSLEELNVSNNKLIE-LPAL---PPRL 339 (454)
T ss_dssp C---CTTCCEEECCSSCCSE-ESCC---CTTCCEEECCSSCCSE-ECCC---CTTCCEEECCSSCCSC-CCCC---CTTC
T ss_pred c---cCcCCEEECcCCccCc-ccCc---CCcCCEEECcCCcCCc-ccCC---cCcCCEEECCCCcccc-cccc---CCcC
Confidence 2 3667777777777765 2211 1466777777777764 2211 1467777777777765 4443 3566
Q ss_pred cccCCCCCCCCCCCcccccccccCceEEcccceeee--cccccccCCCCCCEEECCCCcceeecCCCCcCCceEeCcCCc
Q 047196 503 LFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSG--DIPSTIGDLKDLQNISLACNGLEGLIPESFGYLTELNLSFNK 580 (827)
Q Consensus 503 ~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g--~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~L~~L~ls~N~ 580 (827)
+.|++++|++++ +|. .++.|+.|++++|++++ .+|.++++ |+.|++.|.+|..+.+|+.||+++|+
T Consensus 340 ~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~~l~~--------L~~n~~~~~i~~~~~~L~~L~ls~N~ 407 (454)
T 1jl5_A 340 ERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPESVED--------LRMNSHLAEVPELPQNLKQLHVETNP 407 (454)
T ss_dssp CEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCTTCCE--------EECCC---------------------
T ss_pred CEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChHHHHh--------hhhcccccccccccCcCCEEECCCCc
Confidence 677777777763 444 35667777777777776 56655443 23466667777666789999999999
Q ss_pred Cee--cCCCC
Q 047196 581 LEG--EIPRG 588 (827)
Q Consensus 581 l~g--~ip~~ 588 (827)
++| .+|..
T Consensus 408 l~~~~~iP~s 417 (454)
T 1jl5_A 408 LREFPDIPES 417 (454)
T ss_dssp ----------
T ss_pred CCccccchhh
Confidence 998 78853
No 28
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=4.4e-42 Score=390.66 Aligned_cols=391 Identities=21% Similarity=0.247 Sum_probs=228.1
Q ss_pred CCCCCcccc--eecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCC
Q 047196 82 NTSVCNWIG--ITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLS 159 (827)
Q Consensus 82 ~~~~C~W~g--v~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~ 159 (827)
+.+.|.|.+ |.|+. ++++ .+|. + .++|++|||++|.+++..|..|.++++|++|+|++|.+.
T Consensus 4 ~~~~c~~~~~~~~c~~------------~~l~-~lp~-l--~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~ 67 (455)
T 3v47_A 4 GTSECSVIGYNAICIN------------RGLH-QVPE-L--PAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPG 67 (455)
T ss_dssp ---CCEEETTEEECCS------------SCCS-SCCC-C--CTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTT
T ss_pred ccceeEEEccccCcCC------------CCcc-cCCC-C--CCccCEEEecCCccCcCChhHhccCccccEEECcCCccc
Confidence 345577766 66653 2333 3344 2 278999999999999888999999999999999999998
Q ss_pred Cccc-cccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCc
Q 047196 160 GSLS-SVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKE 238 (827)
Q Consensus 160 g~~p-~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~ 238 (827)
+.++ ..+.++++|++|+|++|.++ +..|..|+++++|++|++++|.+++.+|..
T Consensus 68 ~~i~~~~~~~l~~L~~L~Ls~n~l~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 122 (455)
T 3v47_A 68 LVIRNNTFRGLSSLIILKLDYNQFL-------------------------QLETGAFNGLANLEVLTLTQCNLDGAVLSG 122 (455)
T ss_dssp CEECTTTTTTCTTCCEEECTTCTTC-------------------------EECTTTTTTCTTCCEEECTTSCCBTHHHHS
T ss_pred ceECcccccccccCCEEeCCCCccC-------------------------ccChhhccCcccCCEEeCCCCCCCccccCc
Confidence 6653 34555555555555555554 444455555555555555555555433322
Q ss_pred --CcCCccccEEEccccccccccccc-ccCcCCCcEEEeecccCcccCchhhhcC--CCccEEEecCCccccccChhh--
Q 047196 239 --ISNLTILRKISLRNNKLRGEIPHE-IGYLPNLENLVLGFNNLVGVVPAAIFNM--STVKKIYLLDNSLLGSFSLGI-- 311 (827)
Q Consensus 239 --~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~~p~~~~~l--~~L~~L~l~~n~l~~~~~~~~-- 311 (827)
++++++|++|+|++|++++..|.. +..+++|++|+|++|++++..|..+.++ .+++.|++++|.+.+..+..+
T Consensus 123 ~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~~~L~~L~l~~n~l~~~~~~~~~~ 202 (455)
T 3v47_A 123 NFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLLNFQGKHFTLLRLSSITLQDMNEYWLGW 202 (455)
T ss_dssp STTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSGGGTTCEEEEEECTTCBCTTCSTTCTTH
T ss_pred ccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhhccccccccccccccCcccccchhhccc
Confidence 555555555555555555444443 4555555555555555555555544443 445555555555443222111
Q ss_pred -----hcCCCCccEEeCcCCccccccCccccCC---CCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhccccccc
Q 047196 312 -----DLSLPNVERLNLGLNRFSGTIPSFITNA---SKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLE 383 (827)
Q Consensus 312 -----~~~l~~L~~L~L~~N~l~~~~p~~~~~l---~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~ 383 (827)
...+++|++|++++|++++..|..+... ++|+.|++++|.+.+.... .+.+.+..+..+..+
T Consensus 203 ~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~----- 272 (455)
T 3v47_A 203 EKCGNPFKNTSITTLDLSGNGFKESMAKRFFDAIAGTKIQSLILSNSYNMGSSFG-----HTNFKDPDNFTFKGL----- 272 (455)
T ss_dssp HHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHHTTTCCEEEEECTTCTTTSCCTT-----CCSSCCCCTTTTGGG-----
T ss_pred cccccccccceeeeEecCCCcccccchhhhhccccccceeeEeeccccccccccc-----hhhhccCcccccccc-----
Confidence 1145677888888888877777666543 7778888887765543111 111111111111111
Q ss_pred EEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCc
Q 047196 384 NIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNK 463 (827)
Q Consensus 384 ~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 463 (827)
..++|+.|++++|++++.+|..++.+++|++|+|++|++++..|..+.++++|++|+|++|+
T Consensus 273 ------------------~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~ 334 (455)
T 3v47_A 273 ------------------EASGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNF 334 (455)
T ss_dssp ------------------TTSCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred ------------------cccCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCc
Confidence 12455555555555555555555555666666666666655555555566666666666666
Q ss_pred ccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeeccc
Q 047196 464 FSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIP 541 (827)
Q Consensus 464 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 541 (827)
+++..|..+.++++|++|+|++|.+++..|..|..+++|++|+|++|++++..+..+..++.|+.|++++|++++.+|
T Consensus 335 l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 335 LGSIDSRMFENLDKLEVLDLSYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp CCEECGGGGTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred cCCcChhHhcCcccCCEEECCCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 655555556666666666666666666666666666666666666666665555555666667777777777776665
No 29
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=100.00 E-value=5.3e-42 Score=389.96 Aligned_cols=383 Identities=19% Similarity=0.197 Sum_probs=281.5
Q ss_pred CCcccceecCCC-CCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccC-ChhhhhccccceEEecCCCCCCcc
Q 047196 85 VCNWIGITCNVN-SHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDI-PPSIFTMHKLKFLDFSDNQLSGSL 162 (827)
Q Consensus 85 ~C~W~gv~C~~~-~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~LdLs~N~l~g~~ 162 (827)
.|.+.|++.-.. ..+++.|||++|.+++..|..|.++++|++|+|++|.+.+.+ |..|.++++|++|||++|++++..
T Consensus 16 ~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~ 95 (455)
T 3v47_A 16 ICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLE 95 (455)
T ss_dssp ECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEEC
T ss_pred CcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccC
Confidence 366666654322 357999999999999999999999999999999999998766 567999999999999999999999
Q ss_pred ccccCCCCCCcEEEcCCCCCCCCcchh-HhhccccccEEEeecccccccCCcc-CCCCCCCcEEEccCCCCcccCCCcCc
Q 047196 163 SSVTFNLSSVLDIRLDSDKLSGELPVN-ICNYLHYLKVLFLAKNMFHGQIPLA-LSKCKRLQLLNLGFKKLSGAIPKEIS 240 (827)
Q Consensus 163 p~~~~~l~~L~~L~L~~n~l~g~ip~~-~~~~~~~L~~L~Ls~N~l~~~~p~~-l~~l~~L~~L~L~~n~l~~~~p~~~~ 240 (827)
|..+.++++|++|+|++|.+++.+|.. .+..+++|++|+|++|.+++..|.. +.++++|++|++++|.+++..|..+.
T Consensus 96 ~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~l~ 175 (455)
T 3v47_A 96 TGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSICEEDLL 175 (455)
T ss_dssp TTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCCCTTTSG
T ss_pred hhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCcccccChhhhh
Confidence 999999999999999999998766654 2334558888888888888777766 77888888888888888888887777
Q ss_pred CC--ccccEEEcccccccccccccc--------cCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChh
Q 047196 241 NL--TILRKISLRNNKLRGEIPHEI--------GYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLG 310 (827)
Q Consensus 241 ~l--~~L~~L~Ls~N~l~~~~p~~~--------~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~ 310 (827)
++ .+|+.|++++|.+.+..+..+ ..+++|++|++++|++++..|..+...
T Consensus 176 ~l~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~~-------------------- 235 (455)
T 3v47_A 176 NFQGKHFTLLRLSSITLQDMNEYWLGWEKCGNPFKNTSITTLDLSGNGFKESMAKRFFDA-------------------- 235 (455)
T ss_dssp GGTTCEEEEEECTTCBCTTCSTTCTTHHHHCCTTTTCEEEEEECTTSCCCHHHHHHHHHH--------------------
T ss_pred ccccccccccccccCcccccchhhccccccccccccceeeeEecCCCcccccchhhhhcc--------------------
Confidence 66 678888888888876544332 355677777777777777777666543
Q ss_pred hhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCC
Q 047196 311 IDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNC 390 (827)
Q Consensus 311 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N 390 (827)
...++|+.|++++|.+.+... ..+.+.+..+.. +.+.... +|++|++++|
T Consensus 236 --~~~~~L~~L~l~~~~~~~~~~--------------~~~~~~~~~~~~-------~~~~~~~-------~L~~L~l~~n 285 (455)
T 3v47_A 236 --IAGTKIQSLILSNSYNMGSSF--------------GHTNFKDPDNFT-------FKGLEAS-------GVKTCDLSKS 285 (455)
T ss_dssp --TTTCCEEEEECTTCTTTSCCT--------------TCCSSCCCCTTT-------TGGGTTS-------CCCEEECCSS
T ss_pred --ccccceeeEeecccccccccc--------------chhhhccCcccc-------ccccccc-------CceEEEecCc
Confidence 012344444444444332110 011111110000 0000000 4677777777
Q ss_pred cCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCc
Q 047196 391 NIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPS 470 (827)
Q Consensus 391 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 470 (827)
++++.+|..+..+++|+.|++++|++++..|..|.++++|++|+|++|++++..|..+.++++|++|+|++|++++..|.
T Consensus 286 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 365 (455)
T 3v47_A 286 KIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQ 365 (455)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTT
T ss_pred cccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChh
Confidence 77777777777777888888888888777777777788888888888888777777777788888888888888777777
Q ss_pred cccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCc
Q 047196 471 CLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLS 517 (827)
Q Consensus 471 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p 517 (827)
.+..+++|++|+|++|++++..+..+..+++|+.|++++|.+++..|
T Consensus 366 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 366 SFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 78888888888888888887666677778888888888888887766
No 30
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6.5e-40 Score=371.15 Aligned_cols=353 Identities=16% Similarity=0.181 Sum_probs=209.3
Q ss_pred cEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcC
Q 047196 99 RVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLD 178 (827)
Q Consensus 99 ~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~ 178 (827)
+++.|++++|.+++. | .+..+++|++|+|++|++++. | ++.+++|++|||++|++++. + +.++++|++|+++
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECC
Confidence 567777777777764 3 567777777777777777653 3 66777777777777777664 2 6666666666666
Q ss_pred CCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEccccccccc
Q 047196 179 SDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGE 258 (827)
Q Consensus 179 ~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 258 (827)
+|.+++ +| + ..+++|++|++++|++++. .++++++|++|++++|...+.+ .++.+++|++|++++|++++
T Consensus 115 ~N~l~~-l~--~-~~l~~L~~L~l~~N~l~~l---~l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~- 184 (457)
T 3bz5_A 115 TNKLTK-LD--V-SQNPLLTYLNCARNTLTEI---DVSHNTQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE- 184 (457)
T ss_dssp SSCCSC-CC--C-TTCTTCCEEECTTSCCSCC---CCTTCTTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-
T ss_pred CCcCCe-ec--C-CCCCcCCEEECCCCcccee---ccccCCcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-
Confidence 666664 43 2 2234666666666666652 2556666666666666544444 35566666666666666664
Q ss_pred ccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccC
Q 047196 259 IPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITN 338 (827)
Q Consensus 259 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (827)
+| ++.+++|++|++++|++++. .+..+++|+.|++++|.+.+ +| + ..+++|+.|++++|++++.. +..
T Consensus 185 l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~Ls~N~l~~-ip--~-~~l~~L~~L~l~~N~l~~~~---~~~ 252 (457)
T 3bz5_A 185 LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDCSSNKLTE-ID--V-TPLTQLTYFDCSVNPLTELD---VST 252 (457)
T ss_dssp CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEECCSSCCSC-CC--C-TTCTTCSEEECCSSCCSCCC---CTT
T ss_pred ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEECcCCcccc-cC--c-cccCCCCEEEeeCCcCCCcC---HHH
Confidence 33 55666666666666666654 25555555556665555554 33 2 24555555555555555432 234
Q ss_pred CCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccc
Q 047196 339 ASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTG 418 (827)
Q Consensus 339 l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 418 (827)
+++|+.|+++.| +|+.|++++|.+.|.+| ++.+++|+.|++++|...+
T Consensus 253 l~~L~~L~l~~n------------------------------~L~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~ 300 (457)
T 3bz5_A 253 LSKLTTLHCIQT------------------------------DLLEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLY 300 (457)
T ss_dssp CTTCCEEECTTC------------------------------CCSCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCC
T ss_pred CCCCCEEeccCC------------------------------CCCEEECCCCccCCccc--ccccccCCEEECCCCcccc
Confidence 445555555443 24455566666555555 3455666666666666655
Q ss_pred cccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccc
Q 047196 419 SIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWN 498 (827)
Q Consensus 419 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 498 (827)
.+|. ...+|+.|++++| ++|+.|++++|++++ ++ ++++++|+.||+++|++++
T Consensus 301 ~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N~l~~-l~--l~~l~~L~~L~l~~N~l~~-------- 353 (457)
T 3bz5_A 301 LLDC---QAAGITELDLSQN-------------PKLVYLYLNNTELTE-LD--VSHNTKLKSLSCVNAHIQD-------- 353 (457)
T ss_dssp EEEC---TTCCCSCCCCTTC-------------TTCCEEECTTCCCSC-CC--CTTCTTCSEEECCSSCCCB--------
T ss_pred eecc---CCCcceEechhhc-------------ccCCEEECCCCcccc-cc--cccCCcCcEEECCCCCCCC--------
Confidence 5553 2344444444433 456667777777765 22 6666667777777776665
Q ss_pred cccccccCCCCCCCCCCCcccccccccCceEEcccceeeeccccccc
Q 047196 499 LKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIG 545 (827)
Q Consensus 499 l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 545 (827)
++.|..|++++|.++|. +.+..+..+++++|+++|.||..+.
T Consensus 354 l~~L~~L~l~~n~l~g~-----~~~~~l~~l~l~~N~l~g~ip~~~~ 395 (457)
T 3bz5_A 354 FSSVGKIPALNNNFEAE-----GQTITMPKETLTNNSLTIAVSPDLL 395 (457)
T ss_dssp CTTGGGSSGGGTSEEEE-----EEEEECCCBCCBTTBEEEECCTTCB
T ss_pred ccccccccccCCcEEec-----ceeeecCccccccCcEEEEcChhHh
Confidence 23455666666666664 2445556666666777766666543
No 31
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=100.00 E-value=6e-40 Score=371.44 Aligned_cols=362 Identities=18% Similarity=0.187 Sum_probs=221.3
Q ss_pred ccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhH
Q 047196 111 QGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNI 190 (827)
Q Consensus 111 ~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~ 190 (827)
.+..+.+++++++|++|||++|.+++. | ++..+++|++|+|++|++++. | +..+++|++|++++|.+++ +| +
T Consensus 31 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~-~~--~ 102 (457)
T 3bz5_A 31 QATDTISEEQLATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTN-LD--V 102 (457)
T ss_dssp CTTSEEEHHHHTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSC-CC--C
T ss_pred CcccccChhHcCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCce-ee--c
Confidence 334455788899999999999999965 5 799999999999999999985 3 7788888888888888876 34 3
Q ss_pred hhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCc
Q 047196 191 CNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLE 270 (827)
Q Consensus 191 ~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 270 (827)
. .+++|++|++++|.+++ +| ++++++|++|++++|++++. + ++++++|++|++++|+..+.+ .++.+++|+
T Consensus 103 ~-~l~~L~~L~L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~--~~~~l~~L~ 173 (457)
T 3bz5_A 103 T-PLTKLTYLNCDTNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKL--DVTPQTQLT 173 (457)
T ss_dssp T-TCTTCCEEECCSSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCC--CCTTCTTCC
T ss_pred C-CCCcCCEEECCCCcCCe-ec--CCCCCcCCEEECCCCcccee-c--cccCCcCCEEECCCCCccccc--ccccCCcCC
Confidence 3 34577777777777776 33 77777777777777777763 2 667777777777777655555 366777777
Q ss_pred EEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCC
Q 047196 271 NLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTN 350 (827)
Q Consensus 271 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N 350 (827)
+|++++|++++ +| +..+++|+.|++++|.+.+. + + ..+++|++|++++|++++ +| +..+++|+.|++++|
T Consensus 174 ~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~-~--l-~~l~~L~~L~Ls~N~l~~-ip--~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 174 TLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL-D--L-NQNIQLTFLDCSSNKLTE-ID--VTPLTQLTYFDCSVN 243 (457)
T ss_dssp EEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC-C--C-TTCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSS
T ss_pred EEECCCCccce-ec--cccCCCCCEEECcCCcCCee-c--c-ccCCCCCEEECcCCcccc-cC--ccccCCCCEEEeeCC
Confidence 77777777776 33 55555666666666555543 1 1 144555555555555554 33 444555555555555
Q ss_pred cceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCC
Q 047196 351 SFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKL 430 (827)
Q Consensus 351 ~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 430 (827)
++ ++.. ++.+++|+.|++++| +|
T Consensus 244 ~l----------------------------------------~~~~---~~~l~~L~~L~l~~n--------------~L 266 (457)
T 3bz5_A 244 PL----------------------------------------TELD---VSTLSKLTTLHCIQT--------------DL 266 (457)
T ss_dssp CC----------------------------------------SCCC---CTTCTTCCEEECTTC--------------CC
T ss_pred cC----------------------------------------CCcC---HHHCCCCCEEeccCC--------------CC
Confidence 44 4322 223344444444433 23
Q ss_pred cEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCC
Q 047196 431 QGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSN 510 (827)
Q Consensus 431 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N 510 (827)
+.|++++|.+.|.+| +..+++|+.|++++|++.+.+|. ...+|+.|++++| ++|+.|++++|
T Consensus 267 ~~L~l~~n~~~~~~~--~~~l~~L~~L~Ls~n~~l~~l~~---~~~~L~~L~l~~~-------------~~L~~L~L~~N 328 (457)
T 3bz5_A 267 LEIDLTHNTQLIYFQ--AEGCRKIKELDVTHNTQLYLLDC---QAAGITELDLSQN-------------PKLVYLYLNNT 328 (457)
T ss_dssp SCCCCTTCTTCCEEE--CTTCTTCCCCCCTTCTTCCEEEC---TTCCCSCCCCTTC-------------TTCCEEECTTC
T ss_pred CEEECCCCccCCccc--ccccccCCEEECCCCcccceecc---CCCcceEechhhc-------------ccCCEEECCCC
Confidence 344445555444444 23445555555555555555443 2334444444444 34555555555
Q ss_pred CCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceeecCCCCcCCceEeCcCCcCeecCCC
Q 047196 511 SLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESFGYLTELNLSFNKLEGEIPR 587 (827)
Q Consensus 511 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~L~~L~ls~N~l~g~ip~ 587 (827)
++++. .++.++.|+.|++++|+|++ ++.|+.|++++|+++|. ..+..|..+++++|+++|.||.
T Consensus 329 ~l~~l---~l~~l~~L~~L~l~~N~l~~--------l~~L~~L~l~~n~l~g~--~~~~~l~~l~l~~N~l~g~ip~ 392 (457)
T 3bz5_A 329 ELTEL---DVSHNTKLKSLSCVNAHIQD--------FSSVGKIPALNNNFEAE--GQTITMPKETLTNNSLTIAVSP 392 (457)
T ss_dssp CCSCC---CCTTCTTCSEEECCSSCCCB--------CTTGGGSSGGGTSEEEE--EEEEECCCBCCBTTBEEEECCT
T ss_pred ccccc---ccccCCcCcEEECCCCCCCC--------ccccccccccCCcEEec--ceeeecCccccccCcEEEEcCh
Confidence 55552 25555566666666666554 13344555666666655 2333556666677777777665
No 32
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=2.8e-37 Score=351.95 Aligned_cols=347 Identities=24% Similarity=0.374 Sum_probs=215.8
Q ss_pred cCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhcccccc
Q 047196 119 GNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLK 198 (827)
Q Consensus 119 ~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~ 198 (827)
..+++|+.|++++|.+.. +| .+..+++|++|||++|.+++. |. + ..+++|+
T Consensus 43 ~~l~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~-------------------------~~-~-~~l~~L~ 93 (466)
T 1o6v_A 43 TDLDQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDI-------------------------TP-L-KNLTKLV 93 (466)
T ss_dssp HHHHTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-------------------------GG-G-TTCTTCC
T ss_pred hHhccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCc-------------------------hh-h-hccccCC
Confidence 345677777777777763 44 366777777777777777632 22 2 2234777
Q ss_pred EEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeeccc
Q 047196 199 VLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNN 278 (827)
Q Consensus 199 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 278 (827)
+|++++|.+++..| ++++++|++|++++|.+++..+ +.++++|++|++++|++++ +| .++.+++|++|+++ |.
T Consensus 94 ~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~~-~~~~l~~L~~L~l~-~~ 166 (466)
T 1o6v_A 94 DILMNNNQIADITP--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISD-IS-ALSGLTSLQQLSFG-NQ 166 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECC-CG-GGTTCTTCSEEEEE-ES
T ss_pred EEECCCCccccChh--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCC-Ch-hhccCCcccEeecC-Cc
Confidence 77777777776544 7777777777777777775433 6777777777777777764 33 36677777777775 44
Q ss_pred CcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCC
Q 047196 279 LVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPN 358 (827)
Q Consensus 279 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~ 358 (827)
+.+..+ +.++++|+.|++++|. +++. ..+..+++|++|++++|.+++..|
T Consensus 167 ~~~~~~--~~~l~~L~~L~l~~n~-------------------------l~~~--~~l~~l~~L~~L~l~~n~l~~~~~- 216 (466)
T 1o6v_A 167 VTDLKP--LANLTTLERLDISSNK-------------------------VSDI--SVLAKLTNLESLIATNNQISDITP- 216 (466)
T ss_dssp CCCCGG--GTTCTTCCEEECCSSC-------------------------CCCC--GGGGGCTTCSEEECCSSCCCCCGG-
T ss_pred ccCchh--hccCCCCCEEECcCCc-------------------------CCCC--hhhccCCCCCEEEecCCccccccc-
Confidence 443222 4445555555555544 4332 124445555555555555443222
Q ss_pred CccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCC
Q 047196 359 TIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFN 438 (827)
Q Consensus 359 ~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 438 (827)
++.+. +|++|++++|++++. ..+..+++|+.|++++|++++..| +..+++|+.|++++|
T Consensus 217 ----------------~~~l~-~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n 275 (466)
T 1o6v_A 217 ----------------LGILT-NLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGAN 275 (466)
T ss_dssp ----------------GGGCT-TCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSS
T ss_pred ----------------ccccC-CCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCC
Confidence 11122 455566666655542 245566666666666666665544 666666777777777
Q ss_pred CCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcc
Q 047196 439 KLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSL 518 (827)
Q Consensus 439 ~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~ 518 (827)
.+++..| +..+++|+.|++++|++++..| +..+++|+.|++++|++++..| +..+++|+.|++++|.+++. .
T Consensus 276 ~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~ 347 (466)
T 1o6v_A 276 QISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--S 347 (466)
T ss_dssp CCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--G
T ss_pred ccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--h
Confidence 6665433 5666667777777777665433 5666777777777777766555 56667777777777777664 3
Q ss_pred cccccccCceEEcccceeeecccccccCCCCCCEEECCCCccee
Q 047196 519 DIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEG 562 (827)
Q Consensus 519 ~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g 562 (827)
.+..++.|+.|++++|++++.+| +..+++|+.|++++|.+++
T Consensus 348 ~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 348 SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp GGTTCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred hhccCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 56677777777777777777666 6777777777777777776
No 33
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=100.00 E-value=4.7e-37 Score=350.02 Aligned_cols=344 Identities=24% Similarity=0.350 Sum_probs=256.8
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRL 177 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 177 (827)
.+++.|+++++++.. +| .+..+++|++|||++|.+++..| +.++++|++|++++|.+++..
T Consensus 46 ~~l~~L~l~~~~i~~-l~-~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~--------------- 106 (466)
T 1o6v_A 46 DQVTTLQADRLGIKS-ID-GVEYLNNLTQINFSNNQLTDITP--LKNLTKLVDILMNNNQIADIT--------------- 106 (466)
T ss_dssp HTCCEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG---------------
T ss_pred ccccEEecCCCCCcc-Cc-chhhhcCCCEEECCCCccCCchh--hhccccCCEEECCCCccccCh---------------
Confidence 468999999999875 44 48899999999999999996644 999999999999999998542
Q ss_pred CCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccc
Q 047196 178 DSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRG 257 (827)
Q Consensus 178 ~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 257 (827)
. ...+++|++|++++|.+++..+ +.++++|++|++++|.+++. | .++++++|++|+++ |.+.+
T Consensus 107 ----------~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~-~~~~l~~L~~L~l~-~~~~~ 169 (466)
T 1o6v_A 107 ----------P--LANLTNLTGLTLFNNQITDIDP--LKNLTNLNRLELSSNTISDI-S-ALSGLTSLQQLSFG-NQVTD 169 (466)
T ss_dssp ----------G--GTTCTTCCEEECCSSCCCCCGG--GTTCTTCSEEEEEEEEECCC-G-GGTTCTTCSEEEEE-ESCCC
T ss_pred ----------h--hcCCCCCCEEECCCCCCCCChH--HcCCCCCCEEECCCCccCCC-h-hhccCCcccEeecC-CcccC
Confidence 2 2234589999999999987644 89999999999999999863 3 48999999999997 56654
Q ss_pred cccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCcccc
Q 047196 258 EIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFIT 337 (827)
Q Consensus 258 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (827)
.. .+..+++|++|++++|.+++. ..+..+++|+.|++++|.+.+..+ ++
T Consensus 170 ~~--~~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~---------------------------~~ 218 (466)
T 1o6v_A 170 LK--PLANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP---------------------------LG 218 (466)
T ss_dssp CG--GGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG---------------------------GG
T ss_pred ch--hhccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc---------------------------cc
Confidence 43 389999999999999998764 235555555555555555544333 33
Q ss_pred CCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCcccc
Q 047196 338 NASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLT 417 (827)
Q Consensus 338 ~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 417 (827)
.+++|+.|++++|.+++. ..+..++ +|+.|++++|.+++..| +..+++|+.|++++|+++
T Consensus 219 ~l~~L~~L~l~~n~l~~~-----------------~~l~~l~-~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~ 278 (466)
T 1o6v_A 219 ILTNLDELSLNGNQLKDI-----------------GTLASLT-NLTDLDLANNQISNLAP--LSGLTKLTELKLGANQIS 278 (466)
T ss_dssp GCTTCCEEECCSSCCCCC-----------------GGGGGCT-TCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCC
T ss_pred ccCCCCEEECCCCCcccc-----------------hhhhcCC-CCCEEECCCCccccchh--hhcCCCCCEEECCCCccC
Confidence 444555555555544321 0122222 56666666666665544 667777777777777777
Q ss_pred ccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCcccc
Q 047196 418 GSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFW 497 (827)
Q Consensus 418 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 497 (827)
+..+ +..+++|+.|++++|++.+..| +..+++|+.|++++|++++..| +..+++|+.|++++|.+++. ..+.
T Consensus 279 ~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~l~ 350 (466)
T 1o6v_A 279 NISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNISDISP--VSSLTKLQRLFFYNNKVSDV--SSLA 350 (466)
T ss_dssp CCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG--GGGCTTCCEEECCSSCCCCC--GGGT
T ss_pred cccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCCCchh--hccCccCCEeECCCCccCCc--hhhc
Confidence 6544 6777888888888888776544 6777888888888888876655 67788888888888888775 4677
Q ss_pred ccccccccCCCCCCCCCCCcccccccccCceEEcccceeee
Q 047196 498 NLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSG 538 (827)
Q Consensus 498 ~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 538 (827)
.+++|+.|++++|++++..| +..++.|+.|++++|.+++
T Consensus 351 ~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~~~~ 389 (466)
T 1o6v_A 351 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQAWTN 389 (466)
T ss_dssp TCTTCCEEECCSSCCCBCGG--GTTCTTCCEEECCCEEEEC
T ss_pred cCCCCCEEeCCCCccCccch--hhcCCCCCEEeccCCcccC
Confidence 88888888888888888777 7788888889999998886
No 34
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=6.4e-36 Score=351.14 Aligned_cols=173 Identities=14% Similarity=0.135 Sum_probs=89.6
Q ss_pred cCCCCCCCCCCCCc----ccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccc
Q 047196 74 LLAQNSTSNTSVCN----WIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLK 149 (827)
Q Consensus 74 ~l~~w~~~~~~~C~----W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 149 (827)
.+.+|. .+.+||. |.++.|+. + ++-....... ...-..+++++.|++++|.+....+..|..+++|+
T Consensus 8 ~l~~~~-~~~~C~~~~~~~~c~~~~~---~---i~~~~~~~~~--~~~~l~l~~l~~l~l~~~~l~~lp~~~~~~l~~L~ 78 (597)
T 3oja_B 8 NVKPRQ-PEYKCIDSNLQYDCVFYDV---H---IDMQTQDVYF--GFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVE 78 (597)
T ss_dssp ---CCC-SEECCCCC--CCSEEECSC---E---ECSSCCCCEE--SCSSGGGCCCSEEEESSCEESEECTHHHHHCCCCS
T ss_pred cccCCC-CCCcCcccCcCceeEecCc---e---eccccccccc--CcccccCCCceEEEeeCCCCCCcCHHHHccCCCCc
Confidence 456776 5567774 66666652 1 1111111111 11223467888888888888766556677788888
Q ss_pred eEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCC
Q 047196 150 FLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFK 229 (827)
Q Consensus 150 ~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 229 (827)
+|+|++|.+++..|..+..++ +|++|+|++|.+++..|..|+++++|++|+|++|
T Consensus 79 ~L~L~~n~l~~~~~~~~~~l~-------------------------~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 133 (597)
T 3oja_B 79 LLNLNDLQIEEIDTYAFAYAH-------------------------TIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERN 133 (597)
T ss_dssp EEECTTSCCCEECTTTTTTCT-------------------------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred EEECCCCCCCCCChHHhcCCC-------------------------CCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCC
Confidence 888888877654333333222 3333333333333444444455555555555555
Q ss_pred CCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCc
Q 047196 230 KLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLV 280 (827)
Q Consensus 230 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 280 (827)
.+++..+..|+++++|++|+|++|.+++..|..|+.+++|++|+|++|.++
T Consensus 134 ~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 184 (597)
T 3oja_B 134 DLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLT 184 (597)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCS
T ss_pred CCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCC
Confidence 555433333455555555555555555444444444555555555444443
No 35
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-35 Score=339.23 Aligned_cols=313 Identities=18% Similarity=0.180 Sum_probs=210.5
Q ss_pred CCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcc
Q 047196 108 LNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELP 187 (827)
Q Consensus 108 ~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip 187 (827)
++++ .+|..+. +++++|||++|++++..|..|.++++|++|+|++|.+++..|..+.++++|++|+|++|.++ .+|
T Consensus 21 ~~l~-~ip~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~ 96 (477)
T 2id5_A 21 KRFV-AVPEGIP--TETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLK-LIP 96 (477)
T ss_dssp CCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCC-SCC
T ss_pred CCcC-cCCCCCC--CCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCC-ccC
Confidence 3443 3455443 58899999999999888889999999999999999999888888888888888888888887 466
Q ss_pred hhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcC
Q 047196 188 VNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLP 267 (827)
Q Consensus 188 ~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 267 (827)
...+..+++|++|+|++|.+++..|..|.++++|++|++++|.+++..|..|.++++|++|+|++|++++..+..+..++
T Consensus 97 ~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~ 176 (477)
T 2id5_A 97 LGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLH 176 (477)
T ss_dssp TTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCT
T ss_pred cccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccC
Confidence 65555556888888888888877777888888888888888888877777788888888888888888766666777888
Q ss_pred CCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEc
Q 047196 268 NLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDM 347 (827)
Q Consensus 268 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 347 (827)
+|++|+|++|.+++..+..+.++++|+.|++++|...+.++.... ...+|+.|++++|+++...+..+..++
T Consensus 177 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~-~~~~L~~L~l~~n~l~~~~~~~~~~l~------- 248 (477)
T 2id5_A 177 GLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHWPYLDTMTPNCL-YGLNLTSLSITHCNLTAVPYLAVRHLV------- 248 (477)
T ss_dssp TCCEEEEESCCCCEECTTCSCSCTTCCEEEEECCTTCCEECTTTT-TTCCCSEEEEESSCCCSCCHHHHTTCT-------
T ss_pred CCcEEeCCCCcCcEeChhhcccCcccceeeCCCCccccccCcccc-cCccccEEECcCCcccccCHHHhcCcc-------
Confidence 888888888888777666666666666666666655555444333 223444444444444422222233333
Q ss_pred CCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCC
Q 047196 348 GTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRL 427 (827)
Q Consensus 348 s~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l 427 (827)
+|+.|+|++|.+++..+..|..+++|+.|+|++|++++..|..|..+
T Consensus 249 ---------------------------------~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 295 (477)
T 2id5_A 249 ---------------------------------YLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGL 295 (477)
T ss_dssp ---------------------------------TCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTC
T ss_pred ---------------------------------ccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHHHhcCc
Confidence 34444444444444444445555555555555555555555555555
Q ss_pred CCCcEEECCCCCCCCCCCccccccccccEEecCCCccc
Q 047196 428 QKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFS 465 (827)
Q Consensus 428 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 465 (827)
++|+.|+|++|++++..+..|..+++|+.|++++|.+.
T Consensus 296 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 333 (477)
T 2id5_A 296 NYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLA 333 (477)
T ss_dssp TTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEE
T ss_pred ccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCcc
Confidence 55666666666555544445555555556666655554
No 36
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.2e-36 Score=341.07 Aligned_cols=300 Identities=23% Similarity=0.224 Sum_probs=153.5
Q ss_pred cccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEee
Q 047196 196 YLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLG 275 (827)
Q Consensus 196 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 275 (827)
++++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|+
T Consensus 33 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 112 (477)
T 2id5_A 33 ETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDIS 112 (477)
T ss_dssp TCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECT
T ss_pred CCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECC
Confidence 56777777777776666677777777777777777776667777777777777777777765555556677777777777
Q ss_pred cccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceee
Q 047196 276 FNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGI 355 (827)
Q Consensus 276 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 355 (827)
+|++++..|..+.++++|+.|++++|.+.+..+..+. .+++|+.|++++|++++..+..+.++++|+.|++++|.+.+.
T Consensus 113 ~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~ 191 (477)
T 2id5_A 113 ENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFS-GLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAI 191 (477)
T ss_dssp TSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSST-TCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEE
T ss_pred CCccccCChhHccccccCCEEECCCCccceeChhhcc-CCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEe
Confidence 7777666666665555555555555555443333322 444555555555555444334444444444444444444332
Q ss_pred cCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEEC
Q 047196 356 IPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYL 435 (827)
Q Consensus 356 ~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 435 (827)
.+. .+..+. +|++|++++|.+.+.+|.......+|+.|++++|++++..+..+..+++|+.|+|
T Consensus 192 ~~~---------------~~~~l~-~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 255 (477)
T 2id5_A 192 RDY---------------SFKRLY-RLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNL 255 (477)
T ss_dssp CTT---------------CSCSCT-TCCEEEEECCTTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEEC
T ss_pred Chh---------------hcccCc-ccceeeCCCCccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeEC
Confidence 221 111111 3444444444444333333333334444444444444333233444444444444
Q ss_pred CCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCC
Q 047196 436 PFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSL 512 (827)
Q Consensus 436 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l 512 (827)
++|.+++..+..+.++++|+.|+|++|++++..|..+..+++|+.|+|++|++++..+..|..+++|+.|+|++|.+
T Consensus 256 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l 332 (477)
T 2id5_A 256 SYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPYAFRGLNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPL 332 (477)
T ss_dssp CSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTTTBTTCTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCE
T ss_pred CCCcCCccChhhccccccCCEEECCCCccceECHHHhcCcccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCc
Confidence 44444433333444444444444444444444444444444444444444444443333334444444444444443
No 37
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=4e-35 Score=326.25 Aligned_cols=349 Identities=16% Similarity=0.148 Sum_probs=170.3
Q ss_pred CCCCCCCCCCCCc-ccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEe
Q 047196 75 LAQNSTSNTSVCN-WIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDF 153 (827)
Q Consensus 75 l~~w~~~~~~~C~-W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdL 153 (827)
+++|. .+.+||. |.+..|.....++ ............-..++++++|++++|.++...+..+..+++|++|+|
T Consensus 3 ~~~~~-~~~~C~~~~~~~~c~~~~~~i-----~~~~~~~~~~~~~~~l~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L 76 (390)
T 3o6n_A 3 VKPRQ-PEYKCIDSNLQYDCVFYDVHI-----DMQTQDVYFGFEDITLNNQKIVTFKNSTMRKLPAALLDSFRQVELLNL 76 (390)
T ss_dssp ----C-CEECBCC------EEEESCEE-----CSSCCCCEESCSSGGGCCCSEEEEESCEESEECTHHHHHCCCCSEEEC
T ss_pred cCCCC-Cccceehhhhhhccceeeeee-----ecccccccccccccccCCceEEEecCCchhhCChhHhcccccCcEEEC
Confidence 45676 5567774 5555553221122 221111122222345789999999999998655556788999999999
Q ss_pred cCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcc
Q 047196 154 SDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSG 233 (827)
Q Consensus 154 s~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~ 233 (827)
++|.+++..+..+..+++|++|+|++|.++ +..|..++++++|++|++++|.++.
T Consensus 77 ~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-------------------------~~~~~~~~~l~~L~~L~L~~n~l~~ 131 (390)
T 3o6n_A 77 NDLQIEEIDTYAFAYAHTIQKLYMGFNAIR-------------------------YLPPHVFQNVPLLTVLVLERNDLSS 131 (390)
T ss_dssp TTSCCCEECTTTTTTCTTCCEEECCSSCCC-------------------------CCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCcccccChhhccCCCCcCEEECCCCCCC-------------------------cCCHHHhcCCCCCCEEECCCCccCc
Confidence 999998665556665555555555555544 3344444555555555555555553
Q ss_pred cCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhc
Q 047196 234 AIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDL 313 (827)
Q Consensus 234 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 313 (827)
..+..++++++|++|++++|++++..|..+..+++|++|++++|++++.. +..+++|+.|++++|.+.+. .
T Consensus 132 l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~---~~~l~~L~~L~l~~n~l~~~------~ 202 (390)
T 3o6n_A 132 LPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD---LSLIPSLFHANVSYNLLSTL------A 202 (390)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC---GGGCTTCSEEECCSSCCSEE------E
T ss_pred CCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCcCCccc---cccccccceeeccccccccc------C
Confidence 33333455555555555555555444445555555555555555554421 22233333333333333211 0
Q ss_pred CCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCc
Q 047196 314 SLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIG 393 (827)
Q Consensus 314 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~ 393 (827)
..++|+.|++++|+++.. |.. ..++ |+.|++++|+++
T Consensus 203 ~~~~L~~L~l~~n~l~~~-~~~--~~~~----------------------------------------L~~L~l~~n~l~ 239 (390)
T 3o6n_A 203 IPIAVEELDASHNSINVV-RGP--VNVE----------------------------------------LTILKLQHNNLT 239 (390)
T ss_dssp CCSSCSEEECCSSCCCEE-ECC--CCSS----------------------------------------CCEEECCSSCCC
T ss_pred CCCcceEEECCCCeeeec-ccc--cccc----------------------------------------ccEEECCCCCCc
Confidence 123344444444444432 111 1234 444444444444
Q ss_pred cccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCcccc
Q 047196 394 GSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLG 473 (827)
Q Consensus 394 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 473 (827)
+. ..+..+++|+.|++++|++++..|..|..+++|+.|+|++|++++ +|..+..+++|+.|++++|+++ .+|..+.
T Consensus 240 ~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~ 315 (390)
T 3o6n_A 240 DT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQP 315 (390)
T ss_dssp CC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHH
T ss_pred cc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCcccc
Confidence 32 234444444444444444444444444444445555555444442 3333344444555555555444 3344444
Q ss_pred CCCCCCccccCCCcccccCCccccccccccccCCCCCCCC
Q 047196 474 NLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLD 513 (827)
Q Consensus 474 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~ 513 (827)
.+++|++|++++|.++... +..+++|+.|++++|.++
T Consensus 316 ~l~~L~~L~L~~N~i~~~~---~~~~~~L~~L~l~~N~~~ 352 (390)
T 3o6n_A 316 QFDRLENLYLDHNSIVTLK---LSTHHTLKNLTLSHNDWD 352 (390)
T ss_dssp HHTTCSEEECCSSCCCCCC---CCTTCCCSEEECCSSCEE
T ss_pred ccCcCCEEECCCCccceeC---chhhccCCEEEcCCCCcc
Confidence 4445555555555544331 334444555555555544
No 38
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=100.00 E-value=8e-36 Score=323.16 Aligned_cols=282 Identities=21% Similarity=0.267 Sum_probs=204.4
Q ss_pred cCCCHHHHHHHHHHHhhcCCCCCCcCCCCC---CCCCCCCcccceecCC--------CCCcEEEEEcCCCCCccccCccc
Q 047196 50 ASNITTDQQALLALKAHISYDPTNLLAQNS---TSNTSVCNWIGITCNV--------NSHRVTALNISSLNLQGTIPPQL 118 (827)
Q Consensus 50 ~~~~~~~~~aLl~~k~~~~~~~~~~l~~w~---~~~~~~C~W~gv~C~~--------~~~~v~~L~L~~~~l~g~~~~~l 118 (827)
+++..+|++||++||+++..|+.+.+.+|. ....++|.|.|+.|+. ...+|+.|+|++|+++ .+|+.+
T Consensus 22 ~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 22 STALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp -CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred cccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 345678999999999998778877778883 2567899999999952 3468999999999998 778889
Q ss_pred cCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhcccccc
Q 047196 119 GNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLK 198 (827)
Q Consensus 119 ~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~ 198 (827)
+++++|++|+|++|.++ .+|..++.+++|++|||++|.++ .+|..+.++++|++|++++|++.+.+|..+...
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~----- 173 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLAST----- 173 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEE-----
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhc-----
Confidence 99999999999999999 89999999999999999999998 667777788777777777777777777654320
Q ss_pred EEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeeccc
Q 047196 199 VLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNN 278 (827)
Q Consensus 199 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~ 278 (827)
.++..++++++|++|++++|.++ .+|..++++++|++|+|++|++++ +|..++.+++|++|+|++|+
T Consensus 174 -----------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~ 240 (328)
T 4fcg_A 174 -----------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCT 240 (328)
T ss_dssp -----------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCT
T ss_pred -----------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCc
Confidence 01122334556666666666665 555556666666666666666653 44456666666666666666
Q ss_pred CcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcce
Q 047196 279 LVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFS 353 (827)
Q Consensus 279 l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 353 (827)
+.+.+|..+.++++|+.|++++|.+.+.+|..+. .+++|++|++++|++.+.+|..++++++|+.+++..+.+.
T Consensus 241 ~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~-~l~~L~~L~L~~n~~~~~iP~~l~~L~~L~~l~l~~~~~~ 314 (328)
T 4fcg_A 241 ALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIH-RLTQLEKLDLRGCVNLSRLPSLIAQLPANCIILVPPHLQA 314 (328)
T ss_dssp TCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGG-GCTTCCEEECTTCTTCCCCCGGGGGSCTTCEEECCGGGSC
T ss_pred chhhhHHHhcCCCCCCEEECCCCCchhhcchhhh-cCCCCCEEeCCCCCchhhccHHHhhccCceEEeCCHHHHH
Confidence 6666666666666666666666666666665554 6677777777777777777777777777777777766554
No 39
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.6e-34 Score=310.99 Aligned_cols=227 Identities=34% Similarity=0.626 Sum_probs=143.7
Q ss_pred cccEEEccC-CcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEec
Q 047196 381 SLENIYISN-CNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGL 459 (827)
Q Consensus 381 ~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 459 (827)
+|++|++++ |++.+.+|..|.++++|++|+|++|++++.+|..|.++++|++|+|++|.+++.+|..+..+++|++|++
T Consensus 77 ~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 156 (313)
T 1ogq_A 77 YLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITF 156 (313)
T ss_dssp TCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEEC
T ss_pred CCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEEC
Confidence 344444442 4444455555555555555555555555555555555555555555555555555555555556666666
Q ss_pred CCCcccccCCccccCCC-CCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeee
Q 047196 460 AGNKFSGSIPSCLGNLT-SLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSG 538 (827)
Q Consensus 460 s~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 538 (827)
++|++++.+|..+..++ +|++|++++|.+++.+|..+..++ |+.|++++|.+++.+|..++.++.|+.|++++|++++
T Consensus 157 ~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 157 DGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred cCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 66666555565555555 566666666666666666665555 6666666666666666666666666666666666666
Q ss_pred cccccccCCCCCCEEECCCCcceeecCCCCc---CCceEeCcCCcCeecCCCCCCCCCCcccccccCccccCCC
Q 047196 539 DIPSTIGDLKDLQNISLACNGLEGLIPESFG---YLTELNLSFNKLEGEIPRGGPFANFTAKSFMGNEKLCGLP 609 (827)
Q Consensus 539 ~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~---~L~~L~ls~N~l~g~ip~~~~~~~~~~~~~~~n~~lc~~p 609 (827)
.+|. +..+++|+.|+|++|+++|.+|..+. +|+.|++++|+++|.+|..+.+..+....+.+|+.+||.|
T Consensus 236 ~~~~-~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p 308 (313)
T 1ogq_A 236 DLGK-VGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSP 308 (313)
T ss_dssp BGGG-CCCCTTCCEEECCSSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTT
T ss_pred ecCc-ccccCCCCEEECcCCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCC
Confidence 5554 56666677777777777766666543 5677777777777777777777788888888999999964
No 40
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=100.00 E-value=2.2e-33 Score=312.14 Aligned_cols=309 Identities=18% Similarity=0.173 Sum_probs=156.3
Q ss_pred cccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEee
Q 047196 196 YLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLG 275 (827)
Q Consensus 196 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 275 (827)
++++|++++|.++...+..+.++++|++|++++|.+++..|..|+++++|++|+|++|++++..|..++.+++|++|+|+
T Consensus 46 ~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 125 (390)
T 3o6n_A 46 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 125 (390)
T ss_dssp CCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECC
Confidence 45555555555443333334445555555555555554444455555555555555555554444445555555555555
Q ss_pred cccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceee
Q 047196 276 FNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGI 355 (827)
Q Consensus 276 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 355 (827)
+|+++...+..+.++++|++|++++|.+.+..+..+. .+++|++|++++|++++. .+..+++|+.|++++|.+++.
T Consensus 126 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~l~~n~l~~~---~~~~l~~L~~L~l~~n~l~~~ 201 (390)
T 3o6n_A 126 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQ-ATTSLQNLQLSSNRLTHV---DLSLIPSLFHANVSYNLLSTL 201 (390)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTS-SCTTCCEEECCSSCCSBC---CGGGCTTCSEEECCSSCCSEE
T ss_pred CCccCcCCHHHhcCCCCCcEEECCCCccCccChhhcc-CCCCCCEEECCCCcCCcc---ccccccccceeeccccccccc
Confidence 5555432222223333333333333332222111111 333344444444444322 123334444444444443321
Q ss_pred cCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEEC
Q 047196 356 IPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYL 435 (827)
Q Consensus 356 ~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 435 (827)
...++|+.|++++|++... |.. ..++|+.|++
T Consensus 202 ---------------------------------------------~~~~~L~~L~l~~n~l~~~-~~~--~~~~L~~L~l 233 (390)
T 3o6n_A 202 ---------------------------------------------AIPIAVEELDASHNSINVV-RGP--VNVELTILKL 233 (390)
T ss_dssp ---------------------------------------------ECCSSCSEEECCSSCCCEE-ECC--CCSSCCEEEC
T ss_pred ---------------------------------------------CCCCcceEEECCCCeeeec-ccc--ccccccEEEC
Confidence 1123444444444444432 111 1245555555
Q ss_pred CCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCC
Q 047196 436 PFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGP 515 (827)
Q Consensus 436 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~ 515 (827)
++|.+++. ..+..+++|+.|++++|++++..|..+..+++|++|+|++|.+++ +|..+..+++|+.|+|++|+++ .
T Consensus 234 ~~n~l~~~--~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~ 309 (390)
T 3o6n_A 234 QHNNLTDT--AWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-H 309 (390)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-C
T ss_pred CCCCCccc--HHHcCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-e
Confidence 55555542 345555566666666666665556666666666666666666655 3444455666666666666666 3
Q ss_pred CcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceee
Q 047196 516 LSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGL 563 (827)
Q Consensus 516 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ 563 (827)
+|..++.++.|+.|++++|+|+.. | +..+++|+.|++++|.++..
T Consensus 310 ~~~~~~~l~~L~~L~L~~N~i~~~-~--~~~~~~L~~L~l~~N~~~~~ 354 (390)
T 3o6n_A 310 VERNQPQFDRLENLYLDHNSIVTL-K--LSTHHTLKNLTLSHNDWDCN 354 (390)
T ss_dssp CGGGHHHHTTCSEEECCSSCCCCC-C--CCTTCCCSEEECCSSCEEHH
T ss_pred cCccccccCcCCEEECCCCcccee-C--chhhccCCEEEcCCCCccch
Confidence 455566677777777777777643 3 66777888888888887764
No 41
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=100.00 E-value=8.7e-33 Score=324.49 Aligned_cols=287 Identities=17% Similarity=0.185 Sum_probs=186.3
Q ss_pred CcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEc
Q 047196 98 HRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRL 177 (827)
Q Consensus 98 ~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 177 (827)
..++.++++++.+....+..+.++++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..+.+++
T Consensus 51 ~~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~------- 123 (597)
T 3oja_B 51 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVP------- 123 (597)
T ss_dssp CCCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT-------
T ss_pred CCceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCC-------
Confidence 3578899999999877666789999999999999999998888999999999999999999976666555554
Q ss_pred CCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccc
Q 047196 178 DSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRG 257 (827)
Q Consensus 178 ~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 257 (827)
+|++|+|++|.+++..+..|+++++|++|+|++|.+++..|..|+++++|++|+|++|.+++
T Consensus 124 ------------------~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 185 (597)
T 3oja_B 124 ------------------LLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNRLTH 185 (597)
T ss_dssp ------------------TCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTSCCSB
T ss_pred ------------------CCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCCCCCC
Confidence 45555555555555455557899999999999999999999999999999999999999986
Q ss_pred cccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCcccc
Q 047196 258 EIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFIT 337 (827)
Q Consensus 258 ~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (827)
. .++.+++|+.|++++|.+++. . ..++|+.|++++|.++...+..
T Consensus 186 ~---~~~~l~~L~~L~l~~n~l~~l-----~-------------------------~~~~L~~L~ls~n~l~~~~~~~-- 230 (597)
T 3oja_B 186 V---DLSLIPSLFHANVSYNLLSTL-----A-------------------------IPIAVEELDASHNSINVVRGPV-- 230 (597)
T ss_dssp C---CGGGCTTCSEEECCSSCCSEE-----E-------------------------CCTTCSEEECCSSCCCEEECSC--
T ss_pred c---ChhhhhhhhhhhcccCccccc-----c-------------------------CCchhheeeccCCccccccccc--
Confidence 5 256678899999998887642 1 1224555555555554322211
Q ss_pred CCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCcccc
Q 047196 338 NASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLT 417 (827)
Q Consensus 338 ~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 417 (827)
.++|+.|++++|.+++. ..+..++ +|+.|+|++|.+++.+|..|..+++|+.|+|++|+++
T Consensus 231 -~~~L~~L~L~~n~l~~~-----------------~~l~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~ 291 (597)
T 3oja_B 231 -NVELTILKLQHNNLTDT-----------------AWLLNYP-GLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLV 291 (597)
T ss_dssp -CSCCCEEECCSSCCCCC-----------------GGGGGCT-TCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCC
T ss_pred -CCCCCEEECCCCCCCCC-----------------hhhccCC-CCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCC
Confidence 12344444444443321 1122222 3444444444444444444444444555555554444
Q ss_pred ccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCccc
Q 047196 418 GSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFS 465 (827)
Q Consensus 418 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 465 (827)
+ +|..+..+++|+.|+|++|.++ .+|..+..+++|+.|+|++|+++
T Consensus 292 ~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~l~~L~~L~L~~N~l~ 337 (597)
T 3oja_B 292 A-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQFDRLENLYLDHNSIV 337 (597)
T ss_dssp E-EECSSSCCTTCCEEECCSSCCC-CCGGGHHHHTTCSEEECCSSCCC
T ss_pred C-CCcccccCCCCcEEECCCCCCC-ccCcccccCCCCCEEECCCCCCC
Confidence 3 2333344444444444444444 33444444444444444444443
No 42
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=5.4e-32 Score=295.98 Aligned_cols=302 Identities=23% Similarity=0.392 Sum_probs=146.2
Q ss_pred cEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcC
Q 047196 99 RVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLD 178 (827)
Q Consensus 99 ~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~ 178 (827)
+++.|+++++.+... + .+..+++|++|+|++|++++. |. +..+++|++|+|++|.+++. +.+.+++
T Consensus 45 ~L~~L~l~~~~i~~~-~-~~~~~~~L~~L~l~~n~i~~~-~~-~~~l~~L~~L~L~~n~i~~~--~~~~~l~-------- 110 (347)
T 4fmz_A 45 SITKLVVAGEKVASI-Q-GIEYLTNLEYLNLNGNQITDI-SP-LSNLVKLTNLYIGTNKITDI--SALQNLT-------- 110 (347)
T ss_dssp TCSEEECCSSCCCCC-T-TGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCCCC--GGGTTCT--------
T ss_pred cccEEEEeCCccccc-h-hhhhcCCccEEEccCCccccc-hh-hhcCCcCCEEEccCCcccCc--hHHcCCC--------
Confidence 455566665555432 2 355555666666666655532 22 55555566666655555432 1233344
Q ss_pred CCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEccccccccc
Q 047196 179 SDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGE 258 (827)
Q Consensus 179 ~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 258 (827)
+|++|++++|.+++..+ +..+++|+.|++++|.....++ .+..+++|++|++++|.+.+.
T Consensus 111 -----------------~L~~L~l~~n~i~~~~~--~~~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~ 170 (347)
T 4fmz_A 111 -----------------NLRELYLNEDNISDISP--LANLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDV 170 (347)
T ss_dssp -----------------TCSEEECTTSCCCCCGG--GTTCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCC
T ss_pred -----------------cCCEEECcCCcccCchh--hccCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCc
Confidence 44444444444433221 4455555555555554333222 245555555555555555433
Q ss_pred ccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccC
Q 047196 259 IPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITN 338 (827)
Q Consensus 259 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 338 (827)
.+ +..+++|++|++++|.+++..+ +..+++|+.+++++|.+.+..+ + ..+++|++|++++|++++..+ +..
T Consensus 171 ~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~-~~~~~L~~L~l~~n~l~~~~~--~~~ 241 (347)
T 4fmz_A 171 TP--IANLTDLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--V-ANMTRLNSLKIGNNKITDLSP--LAN 241 (347)
T ss_dssp GG--GGGCTTCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--G-GGCTTCCEEECCSSCCCCCGG--GTT
T ss_pred hh--hccCCCCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--h-hcCCcCCEEEccCCccCCCcc--hhc
Confidence 22 4555555555555555544322 3344444444444443332221 1 134444444444444443222 344
Q ss_pred CCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccc
Q 047196 339 ASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTG 418 (827)
Q Consensus 339 l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 418 (827)
+++|+. |++++|.+++. ..+..+++|+.|++++|++++
T Consensus 242 l~~L~~----------------------------------------L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~ 279 (347)
T 4fmz_A 242 LSQLTW----------------------------------------LEIGTNQISDI--NAVKDLTKLKMLNVGSNQISD 279 (347)
T ss_dssp CTTCCE----------------------------------------EECCSSCCCCC--GGGTTCTTCCEEECCSSCCCC
T ss_pred CCCCCE----------------------------------------EECCCCccCCC--hhHhcCCCcCEEEccCCccCC
Confidence 444444 44444444432 234445555555555555554
Q ss_pred cccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCccc
Q 047196 419 SIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLT 489 (827)
Q Consensus 419 ~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 489 (827)
. +.+..+++|+.|++++|.+++..|..+..+++|+.|++++|++++..| +..+++|++||+++|.++
T Consensus 280 ~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 280 I--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp C--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred C--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhccc
Confidence 3 234555555555555555555555555555566666666666554444 555566666666666553
No 43
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=100.00 E-value=7.6e-32 Score=294.79 Aligned_cols=301 Identities=25% Similarity=0.387 Sum_probs=136.6
Q ss_pred cccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEee
Q 047196 196 YLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLG 275 (827)
Q Consensus 196 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 275 (827)
+|++|++++|.+.. +| .+..+++|++|++++|.+++..+ +.++++|++|++++|.++. +| .+..+++|++|+++
T Consensus 45 ~L~~L~l~~~~i~~-~~-~~~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~ 118 (347)
T 4fmz_A 45 SITKLVVAGEKVAS-IQ-GIEYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLN 118 (347)
T ss_dssp TCSEEECCSSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECT
T ss_pred cccEEEEeCCcccc-ch-hhhhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECc
Confidence 55555555555542 22 24455555555555555543322 4455555555555555543 22 34455555555555
Q ss_pred cccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceee
Q 047196 276 FNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGI 355 (827)
Q Consensus 276 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 355 (827)
+|.+++..+ +. .+++|+.|++++|.....++ .+..+++|++|++++|.+.+.
T Consensus 119 ~n~i~~~~~--~~-------------------------~l~~L~~L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~ 170 (347)
T 4fmz_A 119 EDNISDISP--LA-------------------------NLTKMYSLNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDV 170 (347)
T ss_dssp TSCCCCCGG--GT-------------------------TCTTCCEEECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCC
T ss_pred CCcccCchh--hc-------------------------cCCceeEEECCCCCCccccc-chhhCCCCcEEEecCCCcCCc
Confidence 555443221 33 34444444444443332222 244444455555444444321
Q ss_pred cCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEEC
Q 047196 356 IPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYL 435 (827)
Q Consensus 356 ~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 435 (827)
.+ +..+. +|++|++++|.+.+..+ +..+++|+.|++++|.+.+..+ +..+++|+.|++
T Consensus 171 ~~-----------------~~~l~-~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~~~~L~~L~l 228 (347)
T 4fmz_A 171 TP-----------------IANLT-DLYSLSLNYNQIEDISP--LASLTSLHYFTAYVNQITDITP--VANMTRLNSLKI 228 (347)
T ss_dssp GG-----------------GGGCT-TCSEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GGGCTTCCEEEC
T ss_pred hh-----------------hccCC-CCCEEEccCCccccccc--ccCCCccceeecccCCCCCCch--hhcCCcCCEEEc
Confidence 11 11222 34444444444443222 4444555555555555544332 444555555555
Q ss_pred CCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCC
Q 047196 436 PFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGP 515 (827)
Q Consensus 436 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~ 515 (827)
++|++++..+ +..+++|++|++++|++++. +.+..+++|++|++++|.+++. +.+..+++|+.|++++|.+++.
T Consensus 229 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~ 302 (347)
T 4fmz_A 229 GNNKITDLSP--LANLSQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNE 302 (347)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGG
T ss_pred cCCccCCCcc--hhcCCCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCc
Confidence 5555543222 44455555555555555431 2344445555555555555442 2244444444444444444444
Q ss_pred CcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcc
Q 047196 516 LSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGL 560 (827)
Q Consensus 516 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l 560 (827)
.|..++.++.|+.|++++|++++..| +..+++|+.|++++|.+
T Consensus 303 ~~~~l~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~l~~N~i 345 (347)
T 4fmz_A 303 DMEVIGGLTNLTTLFLSQNHITDIRP--LASLSKMDSADFANQVI 345 (347)
T ss_dssp GHHHHHTCTTCSEEECCSSSCCCCGG--GGGCTTCSEESSSCC--
T ss_pred ChhHhhccccCCEEEccCCccccccC--hhhhhccceeehhhhcc
Confidence 44444444444445555554444333 44444444444444444
No 44
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=100.00 E-value=5.6e-35 Score=332.56 Aligned_cols=390 Identities=17% Similarity=0.185 Sum_probs=224.8
Q ss_pred CCCCEEECCCCCCCccCChh-hhhccccceEEecCCCCCC----ccccccCCCCCCcEEEcCCCCCCCCcchhHhhccc-
Q 047196 122 SSLTTLNLSHNKLSGDIPPS-IFTMHKLKFLDFSDNQLSG----SLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLH- 195 (827)
Q Consensus 122 ~~L~~L~Ls~N~l~g~~p~~-~~~l~~L~~LdLs~N~l~g----~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~- 195 (827)
++|++|||++|+++...... +..+++|++|+|++|.+++ .++..+..+++|++|+|++|.+.+..+..++..+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 34556666666655333222 5556666666666666653 23444555555555555555554434444444443
Q ss_pred ---cccEEEeecccccc----cCCccCCCCCCCcEEEccCCCCcccCCCcCc-----CCccccEEEccccccccc----c
Q 047196 196 ---YLKVLFLAKNMFHG----QIPLALSKCKRLQLLNLGFKKLSGAIPKEIS-----NLTILRKISLRNNKLRGE----I 259 (827)
Q Consensus 196 ---~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~ 259 (827)
+|++|+|++|.++. .+|..+.++++|++|++++|.++...+..+. ..++|++|++++|++++. +
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l 162 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPL 162 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHH
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHH
Confidence 47777777776663 4466666677777777777766543332222 234566666666666543 2
Q ss_pred cccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccc----cCcc
Q 047196 260 PHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGT----IPSF 335 (827)
Q Consensus 260 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~ 335 (827)
+..+..+++|++|+|++|.++...+..+.. .+....++|++|++++|+++.. ++..
T Consensus 163 ~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~--------------------~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~ 222 (461)
T 1z7x_W 163 ASVLRAKPDFKELTVSNNDINEAGVRVLCQ--------------------GLKDSPCQLEALKLESCGVTSDNCRDLCGI 222 (461)
T ss_dssp HHHHHHCTTCCEEECCSSBCHHHHHHHHHH--------------------HHHHSCCCCCEEECTTSCCBTTHHHHHHHH
T ss_pred HHHHhhCCCCCEEECcCCCcchHHHHHHHH--------------------HHhcCCCCceEEEccCCCCcHHHHHHHHHH
Confidence 444555566666666666655433332221 1111234566666666665542 3555
Q ss_pred ccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchh-cccccccEEEccCCcCccc----cCccccCCCCCceEe
Q 047196 336 ITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIG-NLSMSLENIYISNCNIGGS----IPQLISNLSNLLLLD 410 (827)
Q Consensus 336 ~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~-~~~~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~ 410 (827)
+..+++|+.|++++|.+++..... +...+. .. .+|++|++++|++++. ++..+..+++|+.|+
T Consensus 223 l~~~~~L~~L~Ls~n~l~~~~~~~-----------l~~~~~~~~-~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~ 290 (461)
T 1z7x_W 223 VASKASLRELALGSNKLGDVGMAE-----------LCPGLLHPS-SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELS 290 (461)
T ss_dssp HHHCTTCCEEECCSSBCHHHHHHH-----------HHHHHTSTT-CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEE
T ss_pred HHhCCCccEEeccCCcCChHHHHH-----------HHHHHhcCC-CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEE
Confidence 556666666666666654321000 000111 11 2677777777777654 566666677778888
Q ss_pred ccCcccccccccccc-----CCCCCcEEECCCCCCCCC----CCccccccccccEEecCCCcccccCCccccC-----CC
Q 047196 411 LEGNKLTGSIPVTFG-----RLQKLQGLYLPFNKLAGS----IPDQLCHLARLNTLGLAGNKFSGSIPSCLGN-----LT 476 (827)
Q Consensus 411 Ls~N~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-----l~ 476 (827)
+++|.+++..+..+. ..++|+.|++++|.+++. +|..+..+++|+.|++++|++++..+..+.. .+
T Consensus 291 Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~ 370 (461)
T 1z7x_W 291 LAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGS 370 (461)
T ss_dssp CTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTC
T ss_pred CCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCC
Confidence 887777654443332 235788888888877754 4555666778888888888777654443332 56
Q ss_pred CCCccccCCCcccc----cCCccccccccccccCCCCCCCCCCCccccc-----ccccCceEEcccceeeeccccc
Q 047196 477 SLRSPDLGSNRLTS----VLPSTFWNLKDILFFDLSSNSLDGPLSLDIG-----NLRVVIGINLSRNNFSGDIPST 543 (827)
Q Consensus 477 ~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~-----~l~~L~~L~Ls~N~l~g~ip~~ 543 (827)
+|++|++++|.+++ .+|..+..+++|++||+++|.+++.-...+. ....|+.|++.++.+....+..
T Consensus 371 ~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~~~~~~ 446 (461)
T 1z7x_W 371 VLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDR 446 (461)
T ss_dssp CCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCHHHHHH
T ss_pred ceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCHHHHHH
Confidence 78888888888875 6677777778888888888887753211111 1234666777666666554443
No 45
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=1.8e-31 Score=289.91 Aligned_cols=290 Identities=23% Similarity=0.278 Sum_probs=165.3
Q ss_pred cccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEee
Q 047196 196 YLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLG 275 (827)
Q Consensus 196 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 275 (827)
+++++++++|.++ .+|..+. ++|+.|++++|.+++..|..|.++++|++|++++|++++..|..|+.+++|++|+|+
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 110 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYIS 110 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECC
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECC
Confidence 4666666666655 4454442 456666666666665555566666666666666666665556666666666666666
Q ss_pred cccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceee
Q 047196 276 FNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGI 355 (827)
Q Consensus 276 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 355 (827)
+|+++. +|..+. ++|++|++++|++++..+..+..+++|+.|++++|.++..
T Consensus 111 ~n~l~~-l~~~~~---------------------------~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~ 162 (332)
T 2ft3_A 111 KNHLVE-IPPNLP---------------------------SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENS 162 (332)
T ss_dssp SSCCCS-CCSSCC---------------------------TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGG
T ss_pred CCcCCc-cCcccc---------------------------ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccC
Confidence 666552 332221 3444455555555444444445555555555555544310
Q ss_pred cCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEEC
Q 047196 356 IPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYL 435 (827)
Q Consensus 356 ~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 435 (827)
+..|..+..+ +|++|++++|++++ +|..+. ++|+.|++++|++++..|..+..+++|+.|+|
T Consensus 163 -------------~~~~~~~~~l--~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L 224 (332)
T 2ft3_A 163 -------------GFEPGAFDGL--KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRLGL 224 (332)
T ss_dssp -------------GSCTTSSCSC--CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBC
T ss_pred -------------CCCcccccCC--ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 0011122222 35555555555554 333322 45666666666666655566666666666666
Q ss_pred CCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCcccccc------ccccccCCCC
Q 047196 436 PFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNL------KDILFFDLSS 509 (827)
Q Consensus 436 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l------~~L~~LdLs~ 509 (827)
++|++++..|..+..+++|+.|++++|+++ .+|..+..+++|++|++++|.+++..+..|..+ ..|+.|++++
T Consensus 225 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~ 303 (332)
T 2ft3_A 225 GHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFN 303 (332)
T ss_dssp CSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCS
T ss_pred CCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEeec
Confidence 666666655556666666666666666666 566666666666666666666666555555432 4566777777
Q ss_pred CCCC--CCCcccccccccCceEEcccce
Q 047196 510 NSLD--GPLSLDIGNLRVVIGINLSRNN 535 (827)
Q Consensus 510 N~l~--g~~p~~~~~l~~L~~L~Ls~N~ 535 (827)
|.+. +..|..+..++.|+.+++++|+
T Consensus 304 N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 304 NPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp SSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred CcccccccCcccccccchhhhhhccccc
Confidence 7776 5566667777777777777764
No 46
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.98 E-value=4.1e-35 Score=333.72 Aligned_cols=383 Identities=20% Similarity=0.195 Sum_probs=256.6
Q ss_pred CCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccc----cCCccCCCCCCCcEEEccCCCCcccCCCcCc-CCc-
Q 047196 170 SSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHG----QIPLALSKCKRLQLLNLGFKKLSGAIPKEIS-NLT- 243 (827)
Q Consensus 170 ~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~-~l~- 243 (827)
++|++|+|+.|.++......++..+++|++|+|++|.++. .++..+..+++|++|++++|.++...+..+. .+.
T Consensus 3 ~~l~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~ 82 (461)
T 1z7x_W 3 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNELGDVGVHCVLQGLQT 82 (461)
T ss_dssp EEEEEEEEESCCCCHHHHHHHHHHHTTCSEEEEESSCCCHHHHHHHHHHHHTCTTCCEEECTTCCCHHHHHHHHHHTTCS
T ss_pred ccceehhhhhcccCchhHHHHHhhcCCccEEEccCCCCCHHHHHHHHHHHHhCCCcCEEeCCCCcCChHHHHHHHHHHhh
Confidence 3466777777776644334444455567777777776653 3455556666666777766666543332221 233
Q ss_pred ---cccEEEcccccccc----cccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCC
Q 047196 244 ---ILRKISLRNNKLRG----EIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLP 316 (827)
Q Consensus 244 ---~L~~L~Ls~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 316 (827)
+|++|+|++|+++. .+|..+..+++|++|+|++|.+++..+..+.. .+....+
T Consensus 83 ~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~--------------------~l~~~~~ 142 (461)
T 1z7x_W 83 PSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSDNLLGDAGLQLLCE--------------------GLLDPQC 142 (461)
T ss_dssp TTCCCCEEECTTSCCBGGGHHHHHHHTTSCTTCCEEECCSSBCHHHHHHHHHH--------------------HHTSTTC
T ss_pred CCCceeEEEccCCCCCHHHHHHHHHHHccCCceeEEECCCCcCchHHHHHHHH--------------------HHhcCCC
Confidence 46666666666652 44566666666666666666665443333221 1111345
Q ss_pred CccEEeCcCCccccc----cCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcC
Q 047196 317 NVERLNLGLNRFSGT----IPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNI 392 (827)
Q Consensus 317 ~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l 392 (827)
+|++|++++|++++. ++..+..+++|+.|++++|.+++..+.. +...+.....+|++|++++|++
T Consensus 143 ~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~-----------l~~~l~~~~~~L~~L~L~~n~l 211 (461)
T 1z7x_W 143 RLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRV-----------LCQGLKDSPCQLEALKLESCGV 211 (461)
T ss_dssp CCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHH-----------HHHHHHHSCCCCCEEECTTSCC
T ss_pred cceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHH-----------HHHHHhcCCCCceEEEccCCCC
Confidence 677777777777653 3455566778888888877765432210 0011111112688888888888
Q ss_pred ccc----cCccccCCCCCceEeccCccccccc-----cccccCCCCCcEEECCCCCCCCC----CCccccccccccEEec
Q 047196 393 GGS----IPQLISNLSNLLLLDLEGNKLTGSI-----PVTFGRLQKLQGLYLPFNKLAGS----IPDQLCHLARLNTLGL 459 (827)
Q Consensus 393 ~g~----~p~~~~~l~~L~~L~Ls~N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~g~----~p~~~~~l~~L~~L~L 459 (827)
++. ++..+..+++|+.|++++|++++.. +..+..+++|+.|++++|.+++. ++..+..+++|+.|++
T Consensus 212 ~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L 291 (461)
T 1z7x_W 212 TSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSL 291 (461)
T ss_dssp BTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEEC
T ss_pred cHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEEC
Confidence 763 5777778889999999999887542 33344688999999999988754 5677777889999999
Q ss_pred CCCcccccCCcccc-----CCCCCCccccCCCccccc----CCccccccccccccCCCCCCCCCCCcccccc-----ccc
Q 047196 460 AGNKFSGSIPSCLG-----NLTSLRSPDLGSNRLTSV----LPSTFWNLKDILFFDLSSNSLDGPLSLDIGN-----LRV 525 (827)
Q Consensus 460 s~N~l~~~~p~~~~-----~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~-----l~~ 525 (827)
++|++++..+..+. ..++|++|++++|.+++. +|..+..+++|+.||+++|.+++..+..+.. .+.
T Consensus 292 s~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~ 371 (461)
T 1z7x_W 292 AGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSV 371 (461)
T ss_dssp TTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCC
T ss_pred CCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCc
Confidence 99988755443333 236899999999998865 4666777889999999999888765555543 568
Q ss_pred CceEEcccceeee----cccccccCCCCCCEEECCCCcceee--------cCCCCcCCceEeCcCCcCee
Q 047196 526 VIGINLSRNNFSG----DIPSTIGDLKDLQNISLACNGLEGL--------IPESFGYLTELNLSFNKLEG 583 (827)
Q Consensus 526 L~~L~Ls~N~l~g----~ip~~~~~l~~L~~L~Ls~N~l~g~--------ip~~~~~L~~L~ls~N~l~g 583 (827)
|+.|++++|++++ .+|..+..+++|+.|++++|++++. +|.....|+.|++.++.+..
T Consensus 372 L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~i~~~~~~~l~~~l~~~~~~L~~L~~~~~~~~~ 441 (461)
T 1z7x_W 372 LRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSE 441 (461)
T ss_dssp CCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSSCCHHHHHHHHHHHTSTTCCCCEEECTTCCCCH
T ss_pred eEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCCCCHHHHHHHHHHhccCCcchhheeecccccCH
Confidence 9999999999987 7888898999999999999998764 56656678888888776654
No 47
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.98 E-value=3e-31 Score=288.19 Aligned_cols=288 Identities=25% Similarity=0.302 Sum_probs=228.9
Q ss_pred CCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEec
Q 047196 220 RLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLL 299 (827)
Q Consensus 220 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 299 (827)
+++.++++++.++ .+|..+. ++|++|++++|++++..|..|..+++|++|+|++|++++..|..+.
T Consensus 34 ~l~~l~~~~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~----------- 99 (332)
T 2ft3_A 34 HLRVVQCSDLGLK-AVPKEIS--PDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFS----------- 99 (332)
T ss_dssp ETTEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGST-----------
T ss_pred cCCEEECCCCCcc-ccCCCCC--CCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhh-----------
Confidence 5677777777766 4555443 5677777777777666666677777777777777777666555554
Q ss_pred CCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhccc
Q 047196 300 DNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLS 379 (827)
Q Consensus 300 ~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~ 379 (827)
.+++|++|++++|+++ .+|..+. ++|++|++++|++++..+. .+..+.
T Consensus 100 --------------~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~---------------~~~~l~ 147 (332)
T 2ft3_A 100 --------------PLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKG---------------VFSGLR 147 (332)
T ss_dssp --------------TCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSG---------------GGSSCS
T ss_pred --------------CcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHh---------------HhCCCc
Confidence 4556666666667666 4454444 7999999999998754332 344454
Q ss_pred ccccEEEccCCcCc--cccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEE
Q 047196 380 MSLENIYISNCNIG--GSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTL 457 (827)
Q Consensus 380 ~~L~~L~Ls~N~l~--g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 457 (827)
+|++|++++|.++ +..|..+..+ +|+.|++++|++++ +|..+. ++|+.|++++|++++..|..+..+++|+.|
T Consensus 148 -~L~~L~l~~n~l~~~~~~~~~~~~l-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 222 (332)
T 2ft3_A 148 -NMNCIEMGGNPLENSGFEPGAFDGL-KLNYLRISEAKLTG-IPKDLP--ETLNELHLDHNKIQAIELEDLLRYSKLYRL 222 (332)
T ss_dssp -SCCEEECCSCCCBGGGSCTTSSCSC-CCSCCBCCSSBCSS-CCSSSC--SSCSCCBCCSSCCCCCCTTSSTTCTTCSCC
T ss_pred -cCCEEECCCCccccCCCCcccccCC-ccCEEECcCCCCCc-cCcccc--CCCCEEECCCCcCCccCHHHhcCCCCCCEE
Confidence 8999999999996 4778888888 99999999999996 555543 799999999999999888999999999999
Q ss_pred ecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCccccccc------ccCceEEc
Q 047196 458 GLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNL------RVVIGINL 531 (827)
Q Consensus 458 ~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l------~~L~~L~L 531 (827)
++++|++++..|..+..+++|++|++++|.++ .+|..+..+++|+.|++++|++++..+..+... ..|+.|++
T Consensus 223 ~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l 301 (332)
T 2ft3_A 223 GLGHNQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPDLKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISL 301 (332)
T ss_dssp BCCSSCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGGCTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEEC
T ss_pred ECCCCcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhcCccCCEEECCCCCCCccChhHccccccccccccccceEe
Confidence 99999999888889999999999999999999 678889999999999999999998777777653 56899999
Q ss_pred ccceee--ecccccccCCCCCCEEECCCCc
Q 047196 532 SRNNFS--GDIPSTIGDLKDLQNISLACNG 559 (827)
Q Consensus 532 s~N~l~--g~ip~~~~~l~~L~~L~Ls~N~ 559 (827)
++|.+. +..|..|..+++|+.+++++|+
T Consensus 302 ~~N~~~~~~~~~~~~~~l~~L~~l~l~~n~ 331 (332)
T 2ft3_A 302 FNNPVPYWEVQPATFRCVTDRLAIQFGNYK 331 (332)
T ss_dssp CSSSSCGGGSCGGGGTTBCCSTTEEC----
T ss_pred ecCcccccccCcccccccchhhhhhccccc
Confidence 999998 6778889999999999999985
No 48
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.98 E-value=7e-31 Score=285.03 Aligned_cols=267 Identities=23% Similarity=0.248 Sum_probs=139.9
Q ss_pred CCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEec
Q 047196 220 RLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLL 299 (827)
Q Consensus 220 ~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~ 299 (827)
+|++|++++|++++..+..|+++++|++|+|++|++++..|..|+.+++|++|+|++|+++. +|..+. ++|++|+++
T Consensus 53 ~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~-l~~~~~--~~L~~L~l~ 129 (330)
T 1xku_A 53 DTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKE-LPEKMP--KTLQELRVH 129 (330)
T ss_dssp TCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCSB-CCSSCC--TTCCEEECC
T ss_pred CCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCCc-cChhhc--ccccEEECC
Confidence 44444444444444444444444444444444444444444444444444444444444442 222221 334444444
Q ss_pred CCccccccChhhhcCCCCccEEeCcCCccc--cccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhc
Q 047196 300 DNSLLGSFSLGIDLSLPNVERLNLGLNRFS--GTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGN 377 (827)
Q Consensus 300 ~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~ 377 (827)
+|.+.+..+..+ ..+++|+.|++++|++. +..+..+..+++|++|++++|.++.. | ..+.
T Consensus 130 ~n~l~~~~~~~~-~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l-~---------------~~~~- 191 (330)
T 1xku_A 130 ENEITKVRKSVF-NGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTI-P---------------QGLP- 191 (330)
T ss_dssp SSCCCBBCHHHH-TTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSC-C---------------SSCC-
T ss_pred CCcccccCHhHh-cCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccC-C---------------cccc-
Confidence 443332222111 24555555555555553 24555666677777777777666531 1 1111
Q ss_pred ccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEE
Q 047196 378 LSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTL 457 (827)
Q Consensus 378 ~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L 457 (827)
.+|++|++++|++++..|..+..+++|+.|++++|++++..+..+..+++|+.|+|++|+++ .+|..+..+++|++|
T Consensus 192 --~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L 268 (330)
T 1xku_A 192 --PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLV-KVPGGLADHKYIQVV 268 (330)
T ss_dssp --TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSCCS-SCCTTTTTCSSCCEE
T ss_pred --ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCcCc-cCChhhccCCCcCEE
Confidence 25677777777777666666777777777777777777666666666777777777777666 566666666666777
Q ss_pred ecCCCcccccCCccccCC------CCCCccccCCCcccc--cCCccccccccccccCCCCC
Q 047196 458 GLAGNKFSGSIPSCLGNL------TSLRSPDLGSNRLTS--VLPSTFWNLKDILFFDLSSN 510 (827)
Q Consensus 458 ~Ls~N~l~~~~p~~~~~l------~~L~~L~Ls~N~l~~--~~p~~~~~l~~L~~LdLs~N 510 (827)
++++|++++..+..|... ..|+.+++++|.+.. ..|..|..+.+++.++|++|
T Consensus 269 ~l~~N~i~~~~~~~f~~~~~~~~~~~l~~l~l~~N~~~~~~i~~~~f~~~~~l~~l~L~~N 329 (330)
T 1xku_A 269 YLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQLGNY 329 (330)
T ss_dssp ECCSSCCCCCCTTSSSCSSCCTTSCCCSEEECCSSSSCGGGSCGGGGTTCCCGGGEEC---
T ss_pred ECCCCcCCccChhhcCCcccccccccccceEeecCcccccccCccccccccceeEEEeccc
Confidence 777766665444444322 344555555555432 33344444444444444444
No 49
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.97 E-value=1.2e-30 Score=283.22 Aligned_cols=298 Identities=22% Similarity=0.300 Sum_probs=215.6
Q ss_pred CCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEe
Q 047196 219 KRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYL 298 (827)
Q Consensus 219 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l 298 (827)
.+++.++++++.++ .+|..+. +.|++|++++|++++..+..|+.+++|++|+|++|++++..|..+.++++|++|++
T Consensus 31 c~l~~l~~~~~~l~-~lp~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 107 (330)
T 1xku_A 31 CHLRVVQCSDLGLE-KVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYL 107 (330)
T ss_dssp EETTEEECTTSCCC-SCCCSCC--TTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEEC
T ss_pred CCCeEEEecCCCcc-ccCccCC--CCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEEC
Confidence 36778888888877 4565554 68999999999999887778999999999999999999998999999999999999
Q ss_pred cCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcc
Q 047196 299 LDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNL 378 (827)
Q Consensus 299 ~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~ 378 (827)
++|.+. .+|..+. ++|++|++++|++++..+..+.++++|+.|++++|.+... +..+..+..+
T Consensus 108 s~n~l~-~l~~~~~---~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~-------------~~~~~~~~~l 170 (330)
T 1xku_A 108 SKNQLK-ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSS-------------GIENGAFQGM 170 (330)
T ss_dssp CSSCCS-BCCSSCC---TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGG-------------GBCTTGGGGC
T ss_pred CCCcCC-ccChhhc---ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCcc-------------CcChhhccCC
Confidence 999886 4555433 6899999999999888777888889999999888877531 1223344444
Q ss_pred cccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEe
Q 047196 379 SMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLG 458 (827)
Q Consensus 379 ~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 458 (827)
. +|++|++++|+++. +|..+. ++|+.|++++|++++..|..|..+++|+.|+|++|++++..+..+..+++|+.|+
T Consensus 171 ~-~L~~L~l~~n~l~~-l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 246 (330)
T 1xku_A 171 K-KLSYIRIADTNITT-IPQGLP--PSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELH 246 (330)
T ss_dssp T-TCCEEECCSSCCCS-CCSSCC--TTCSEEECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEE
T ss_pred C-CcCEEECCCCcccc-CCcccc--ccCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEE
Confidence 4 67777777777774 444332 6777777777777776677777777777777777777766666677777777777
Q ss_pred cCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeee
Q 047196 459 LAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSG 538 (827)
Q Consensus 459 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g 538 (827)
+++|+++ .+|..+..+++|++|++++|++++..+..|..... ......+..+++++|.+..
T Consensus 247 L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i~~~~~~~f~~~~~------------------~~~~~~l~~l~l~~N~~~~ 307 (330)
T 1xku_A 247 LNNNKLV-KVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPGY------------------NTKKASYSGVSLFSNPVQY 307 (330)
T ss_dssp CCSSCCS-SCCTTTTTCSSCCEEECCSSCCCCCCTTSSSCSSC------------------CTTSCCCSEEECCSSSSCG
T ss_pred CCCCcCc-cCChhhccCCCcCEEECCCCcCCccChhhcCCccc------------------ccccccccceEeecCcccc
Confidence 7777776 56666777777777777777777655554432210 0112455667777776653
Q ss_pred --cccccccCCCCCCEEECCCCc
Q 047196 539 --DIPSTIGDLKDLQNISLACNG 559 (827)
Q Consensus 539 --~ip~~~~~l~~L~~L~Ls~N~ 559 (827)
..|..|..+..++.++|++|+
T Consensus 308 ~~i~~~~f~~~~~l~~l~L~~N~ 330 (330)
T 1xku_A 308 WEIQPSTFRCVYVRAAVQLGNYK 330 (330)
T ss_dssp GGSCGGGGTTCCCGGGEEC----
T ss_pred cccCccccccccceeEEEecccC
Confidence 445677777778888887774
No 50
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.97 E-value=1.6e-33 Score=331.20 Aligned_cols=256 Identities=13% Similarity=0.120 Sum_probs=125.1
Q ss_pred CCcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCC---CccCChhhh------------hccccc
Q 047196 85 VCNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKL---SGDIPPSIF------------TMHKLK 149 (827)
Q Consensus 85 ~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l---~g~~p~~~~------------~l~~L~ 149 (827)
|++|.++.+... .+ +.+.+ ......+..+..+++|++|+|+++.. .+.+|..++ .+++|+
T Consensus 41 ck~W~~~~~~~~-~~---l~~~~-~~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~ 115 (592)
T 3ogk_B 41 CRRWFKIDSETR-EH---VTMAL-CYTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLK 115 (592)
T ss_dssp CHHHHHHHHHHC-CE---EEESC-GGGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCC
T ss_pred hHHHHHhhhccc-cE---EEEee-ccccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCC
Confidence 457998865422 12 22222 22233334466778888888877532 123332222 677888
Q ss_pred eEEecCCCCCCccccccCCC--CCCcEEEcCCCC-CCCCcchhHhhccccccEEEeeccccccc----CCccCCCCCCCc
Q 047196 150 FLDFSDNQLSGSLSSVTFNL--SSVLDIRLDSDK-LSGELPVNICNYLHYLKVLFLAKNMFHGQ----IPLALSKCKRLQ 222 (827)
Q Consensus 150 ~LdLs~N~l~g~~p~~~~~l--~~L~~L~L~~n~-l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~----~p~~l~~l~~L~ 222 (827)
+|+|++|.+++..+..+... .+|++|+|+.+. ++..--..+...+++|++|+|++|.+++. ++..+.++++|+
T Consensus 116 ~L~L~~~~i~~~~~~~l~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~ 195 (592)
T 3ogk_B 116 SVHFRRMIVSDLDLDRLAKARADDLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLE 195 (592)
T ss_dssp EEEEESCBCCHHHHHHHHHHHGGGCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCC
T ss_pred eEEeeccEecHHHHHHHHHhccccCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCcc
Confidence 88888887776555444432 236666665554 11000011122234566666666655443 222334455666
Q ss_pred EEEccCCCCc----ccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCc---ccCchhhhcCCCccE
Q 047196 223 LLNLGFKKLS----GAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLV---GVVPAAIFNMSTVKK 295 (827)
Q Consensus 223 ~L~L~~n~l~----~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~---~~~p~~~~~l~~L~~ 295 (827)
.|++++|.++ +.++..+.++++|++|++++|.+.+ +|..+..+++|++|+++.+... +..+..+..+++|+.
T Consensus 196 ~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~ 274 (592)
T 3ogk_B 196 VLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCR 274 (592)
T ss_dssp EEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCE
T ss_pred EEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhhccccccc
Confidence 6666666554 2233334455556666666655553 4555555666666666542221 122233444455555
Q ss_pred EEecCCccccccChhhhcCCCCccEEeCcCCccccccC-ccccCCCCCcEEEcC
Q 047196 296 IYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIP-SFITNASKLVYLDMG 348 (827)
Q Consensus 296 L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~Ls 348 (827)
++++++. .+.+|..+. .+++|++|++++|.+++... ..+..+++|+.|+++
T Consensus 275 L~l~~~~-~~~l~~~~~-~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~ 326 (592)
T 3ogk_B 275 LGLSYMG-PNEMPILFP-FAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETR 326 (592)
T ss_dssp EEETTCC-TTTGGGGGG-GGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEE
T ss_pred cCccccc-hhHHHHHHh-hcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEecc
Confidence 5554431 122222221 34455555555555433222 223445555555554
No 51
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.96 E-value=2.6e-32 Score=320.76 Aligned_cols=412 Identities=13% Similarity=0.047 Sum_probs=280.4
Q ss_pred CCccCChhhhhccccceEEecCCCC---CCccccccC------------CCCCCcEEEcCCCCCCCCcchhHhhcccc-c
Q 047196 134 LSGDIPPSIFTMHKLKFLDFSDNQL---SGSLSSVTF------------NLSSVLDIRLDSDKLSGELPVNICNYLHY-L 197 (827)
Q Consensus 134 l~g~~p~~~~~l~~L~~LdLs~N~l---~g~~p~~~~------------~l~~L~~L~L~~n~l~g~ip~~~~~~~~~-L 197 (827)
+....+..+..+++|++|+|+++.. .+.+|..+. .+++|++|+|++|.+++..+..+....+. |
T Consensus 61 ~~~~~~~~~~~~~~L~~L~L~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~L 140 (592)
T 3ogk_B 61 YTATPDRLSRRFPNLRSLKLKGKPRAAMFNLIPENWGGYVTPWVTEISNNLRQLKSVHFRRMIVSDLDLDRLAKARADDL 140 (592)
T ss_dssp GGSCHHHHHHHCTTCSEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHHHHHHHHGGGC
T ss_pred cccChHHHHHhCCCCeEEEecCCcchhhcccccccccccchHHHHHHHhhCCCCCeEEeeccEecHHHHHHHHHhccccC
Confidence 3334455677899999999988643 133333322 68899999999998887777766664334 9
Q ss_pred cEEEeeccc-ccc-cCCccCCCCCCCcEEEccCCCCccc----CCCcCcCCccccEEEccccccc----ccccccccCcC
Q 047196 198 KVLFLAKNM-FHG-QIPLALSKCKRLQLLNLGFKKLSGA----IPKEISNLTILRKISLRNNKLR----GEIPHEIGYLP 267 (827)
Q Consensus 198 ~~L~Ls~N~-l~~-~~p~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~----~~~p~~~~~l~ 267 (827)
++|+|++|. ++. .++....++++|++|+|++|.+++. ++..+.++++|++|++++|.++ +.++..+..++
T Consensus 141 ~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~ 220 (592)
T 3ogk_B 141 ETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCR 220 (592)
T ss_dssp CEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCT
T ss_pred cEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCC
Confidence 999999886 221 2233345788999999999988765 3334567889999999999987 45566667889
Q ss_pred CCcEEEeecccCcccCchhhhcCCCccEEEecCCccc---cccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcE
Q 047196 268 NLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLL---GSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVY 344 (827)
Q Consensus 268 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~---~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 344 (827)
+|++|+|++|.+.+ +|..+.++++|+.|+++..... +..+..+. .+++|+.|+++++. .+.+|..+..+++|++
T Consensus 221 ~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~l~-~~~~L~~L~l~~~~-~~~l~~~~~~~~~L~~ 297 (592)
T 3ogk_B 221 SLVSVKVGDFEILE-LVGFFKAAANLEEFCGGSLNEDIGMPEKYMNLV-FPRKLCRLGLSYMG-PNEMPILFPFAAQIRK 297 (592)
T ss_dssp TCCEEECSSCBGGG-GHHHHHHCTTCCEEEECBCCCCTTCTTSSSCCC-CCTTCCEEEETTCC-TTTGGGGGGGGGGCCE
T ss_pred CCcEEeccCccHHH-HHHHHhhhhHHHhhcccccccccchHHHHHHhh-ccccccccCccccc-hhHHHHHHhhcCCCcE
Confidence 99999999998887 6788888999999999864322 11222222 56788888887753 3456777777888888
Q ss_pred EEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEecc-----------C
Q 047196 345 LDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLE-----------G 413 (827)
Q Consensus 345 L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls-----------~ 413 (827)
|++++|.+++... +..+..++ +|++|+++++-..+.++..+..+++|+.|+++ .
T Consensus 298 L~Ls~~~l~~~~~--------------~~~~~~~~-~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~ 362 (592)
T 3ogk_B 298 LDLLYALLETEDH--------------CTLIQKCP-NLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEE 362 (592)
T ss_dssp EEETTCCCCHHHH--------------HHHHTTCT-TCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTT
T ss_pred EecCCCcCCHHHH--------------HHHHHhCc-CCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCcccccccccc
Confidence 8888887653211 11122333 78888888443334455555677888888888 3
Q ss_pred ccccccc-cccccCCCCCcEEECCCCCCCCCCCccccc-cccccEEecC----CCccccc-----CCccccCCCCCCccc
Q 047196 414 NKLTGSI-PVTFGRLQKLQGLYLPFNKLAGSIPDQLCH-LARLNTLGLA----GNKFSGS-----IPSCLGNLTSLRSPD 482 (827)
Q Consensus 414 N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~L~Ls----~N~l~~~-----~p~~~~~l~~L~~L~ 482 (827)
|.+++.. +.....+++|++|+++.|.+++..+..+.. +++|+.|+++ .|++++. ++..+.++++|++|+
T Consensus 363 ~~~~~~~~~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~ 442 (592)
T 3ogk_B 363 GLVSQRGLIALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFA 442 (592)
T ss_dssp CCCCHHHHHHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEE
T ss_pred CccCHHHHHHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEE
Confidence 5665432 223455788888888878887766666554 7778888885 6677653 334456678888888
Q ss_pred cCCCc--ccccCCcccc-ccccccccCCCCCCCCC-CCcccccccccCceEEcccceeeec-ccccccCCCCCCEEECCC
Q 047196 483 LGSNR--LTSVLPSTFW-NLKDILFFDLSSNSLDG-PLSLDIGNLRVVIGINLSRNNFSGD-IPSTIGDLKDLQNISLAC 557 (827)
Q Consensus 483 Ls~N~--l~~~~p~~~~-~l~~L~~LdLs~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~-ip~~~~~l~~L~~L~Ls~ 557 (827)
++++. +++..+..+. .+++|+.|++++|.+++ .++..+..+++|+.|++++|.|++. ++..+..+++|+.|+|++
T Consensus 443 L~~~~~~l~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~ 522 (592)
T 3ogk_B 443 FYLRQGGLTDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQG 522 (592)
T ss_dssp EECCGGGCCHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEES
T ss_pred EecCCCCccHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcC
Confidence 86433 5554444443 36778888888888776 3455556777888888888887655 344456677888888888
Q ss_pred Ccceee
Q 047196 558 NGLEGL 563 (827)
Q Consensus 558 N~l~g~ 563 (827)
|++++.
T Consensus 523 n~it~~ 528 (592)
T 3ogk_B 523 YRASMT 528 (592)
T ss_dssp CBCCTT
T ss_pred CcCCHH
Confidence 887654
No 52
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.96 E-value=1.8e-29 Score=276.52 Aligned_cols=285 Identities=21% Similarity=0.289 Sum_probs=212.1
Q ss_pred CCCCCcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCc
Q 047196 82 NTSVCNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGS 161 (827)
Q Consensus 82 ~~~~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~ 161 (827)
...+|.|.|+ |+ +++++++ .+|..+. ++|++|+|++|++++..+..|.++++|++|+|++|++++.
T Consensus 26 ~~~~C~~~~~-c~----------~~~~~l~-~iP~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~ 91 (353)
T 2z80_A 26 ASLSCDRNGI-CK----------GSSGSLN-SIPSGLT--EAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTI 91 (353)
T ss_dssp -CCEECTTSE-EE----------CCSTTCS-SCCTTCC--TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEE
T ss_pred cCCCCCCCeE-ee----------CCCCCcc-ccccccc--ccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCcc
Confidence 4567999988 75 3455555 3455444 4788888888888876666788888888888888888877
Q ss_pred cccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCC-ccCCCCCCCcEEEccCC-CCcccCCCcC
Q 047196 162 LSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIP-LALSKCKRLQLLNLGFK-KLSGAIPKEI 239 (827)
Q Consensus 162 ~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~n-~l~~~~p~~~ 239 (827)
.|..+.++++|++|++++|.++ .+|...+..+++|++|++++|.+++..+ ..+.++++|++|++++| .+++..|..+
T Consensus 92 ~~~~~~~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~ 170 (353)
T 2z80_A 92 EEDSFSSLGSLEHLDLSYNYLS-NLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDF 170 (353)
T ss_dssp CTTTTTTCTTCCEEECCSSCCS-SCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTT
T ss_pred CHhhcCCCCCCCEEECCCCcCC-cCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHc
Confidence 7777888888888888888887 4666655556688888888888875433 47788888888888888 4666667778
Q ss_pred cCCccccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhh--cCCCC
Q 047196 240 SNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGID--LSLPN 317 (827)
Q Consensus 240 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~--~~l~~ 317 (827)
+++++|++|++++|++++..|..+..+++|++|++++|+++...+..+..+++|+.|++++|.+.+..+..+. ...+.
T Consensus 171 ~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~ 250 (353)
T 2z80_A 171 AGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSL 250 (353)
T ss_dssp TTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCC
T ss_pred cCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccch
Confidence 8888888888888888888888888888888888888888654444455688888888888888765433221 23566
Q ss_pred ccEEeCcCCcccc----ccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCch-hcccccccEEEccCCcC
Q 047196 318 VERLNLGLNRFSG----TIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSI-GNLSMSLENIYISNCNI 392 (827)
Q Consensus 318 L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~-~~~~~~L~~L~Ls~N~l 392 (827)
++.++++.+.+++ .+|..+..+++|+.|++++|+++. +| ..+ ..++ +|++|++++|.+
T Consensus 251 l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~~-i~---------------~~~~~~l~-~L~~L~L~~N~~ 313 (353)
T 2z80_A 251 IKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLKS-VP---------------DGIFDRLT-SLQKIWLHTNPW 313 (353)
T ss_dssp CCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCCC-CC---------------TTTTTTCT-TCCEEECCSSCB
T ss_pred hhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCCc-cC---------------HHHHhcCC-CCCEEEeeCCCc
Confidence 7888888888776 467778888889999998888873 22 222 3444 788899999998
Q ss_pred ccccCc
Q 047196 393 GGSIPQ 398 (827)
Q Consensus 393 ~g~~p~ 398 (827)
.+..|.
T Consensus 314 ~~~~~~ 319 (353)
T 2z80_A 314 DCSCPR 319 (353)
T ss_dssp CCCHHH
T ss_pred cCcCCC
Confidence 888774
No 53
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=2.4e-29 Score=272.21 Aligned_cols=283 Identities=19% Similarity=0.209 Sum_probs=213.3
Q ss_pred CCCCcCCCCCCC-CCCCCcccceecCCCCCcEEEEEcCCCCCccc----cCcc--ccCCCCCCEEECCCCCCCccCChhh
Q 047196 70 DPTNLLAQNSTS-NTSVCNWIGITCNVNSHRVTALNISSLNLQGT----IPPQ--LGNLSSLTTLNLSHNKLSGDIPPSI 142 (827)
Q Consensus 70 ~~~~~l~~w~~~-~~~~C~W~gv~C~~~~~~v~~L~L~~~~l~g~----~~~~--l~~L~~L~~L~Ls~N~l~g~~p~~~ 142 (827)
|+...+..|... ..|+|.|.++.|...... -.-....|. ++.. -...+++++|+|++|+++ .+|+.+
T Consensus 27 ~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~-----~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l 100 (328)
T 4fcg_A 27 PYHDVLSQWQRHYNADRNRWHSAWRQANSNN-----PQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQA 100 (328)
T ss_dssp CHHHHHHHHHHHHHHCCTTHHHHHHHHTTTC-----TTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCG
T ss_pred hHHHHHHHHHHhccCCchhhhhhhccccccc-----ccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhh
Confidence 333456667521 247899999998422110 001112221 1111 123578999999999998 888889
Q ss_pred hhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCc
Q 047196 143 FTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQ 222 (827)
Q Consensus 143 ~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~ 222 (827)
+++++|++|+|++|.++ .+|..+..+++|++|+|++|.++ .+|..+..+ ++|++|++++|++.+.+|..++..
T Consensus 101 ~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l-~~L~~L~L~~n~~~~~~p~~~~~~---- 173 (328)
T 4fcg_A 101 FRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASL-NRLRELSIRACPELTELPEPLAST---- 173 (328)
T ss_dssp GGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGC-TTCCEEEEEEETTCCCCCSCSEEE----
T ss_pred hhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcC-cCCCEEECCCCCCccccChhHhhc----
Confidence 99999999999999998 77777777777777777666666 566555443 356666666665555555443321
Q ss_pred EEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCc
Q 047196 223 LLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNS 302 (827)
Q Consensus 223 ~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~ 302 (827)
.++..+.++++|++|+|++|+++ .+|..++.+++|++|+|++|++++ +|..+..+++|+.|++++|.
T Consensus 174 -----------~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~ 240 (328)
T 4fcg_A 174 -----------DASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCT 240 (328)
T ss_dssp -----------C-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCT
T ss_pred -----------cchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCc
Confidence 12233556999999999999999 889999999999999999999996 56679999999999999999
Q ss_pred cccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccc
Q 047196 303 LLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSL 382 (827)
Q Consensus 303 l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L 382 (827)
+.+.+|..+. .+++|++|++++|++.+.+|..+.++++|+.|++++|++.+.+ |..++.++ ++
T Consensus 241 ~~~~~p~~~~-~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~i---------------P~~l~~L~-~L 303 (328)
T 4fcg_A 241 ALRNYPPIFG-GRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNLSRL---------------PSLIAQLP-AN 303 (328)
T ss_dssp TCCBCCCCTT-CCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTCCCC---------------CGGGGGSC-TT
T ss_pred chhhhHHHhc-CCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCchhhc---------------cHHHhhcc-Cc
Confidence 9999998776 8999999999999999999999999999999999998877654 45667776 79
Q ss_pred cEEEccCCcCccc
Q 047196 383 ENIYISNCNIGGS 395 (827)
Q Consensus 383 ~~L~Ls~N~l~g~ 395 (827)
+.+++..+.+...
T Consensus 304 ~~l~l~~~~~~~l 316 (328)
T 4fcg_A 304 CIILVPPHLQAQL 316 (328)
T ss_dssp CEEECCGGGSCC-
T ss_pred eEEeCCHHHHHHH
Confidence 9999999888764
No 54
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=7.2e-29 Score=266.12 Aligned_cols=252 Identities=21% Similarity=0.268 Sum_probs=175.9
Q ss_pred CCcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCC--cc
Q 047196 85 VCNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSG--SL 162 (827)
Q Consensus 85 ~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g--~~ 162 (827)
.|.|.+|.|+.. +++ .+|..+. ++|++|+|++|+++...+..|.++++|++|+|++|.++. ..
T Consensus 6 ~C~~~~l~c~~~------------~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~ 70 (306)
T 2z66_A 6 SCSGTEIRCNSK------------GLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCC 70 (306)
T ss_dssp EEETTEEECCSS------------CCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEE
T ss_pred eeCCCEEEcCCC------------Ccc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCc
Confidence 389999999753 222 2333332 567777777777774444446777777777777777763 33
Q ss_pred ccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCC-ccCCCCCCCcEEEccCCCCcccCCCcCcC
Q 047196 163 SSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIP-LALSKCKRLQLLNLGFKKLSGAIPKEISN 241 (827)
Q Consensus 163 p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p-~~l~~l~~L~~L~L~~n~l~~~~p~~~~~ 241 (827)
+..+..+++|++|++++|.+. .+|..+.. +++|++|++++|.+++..+ ..+.++++|++|++++|.+++..|..+.+
T Consensus 71 ~~~~~~~~~L~~L~Ls~n~i~-~l~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 148 (306)
T 2z66_A 71 SQSDFGTTSLKYLDLSFNGVI-TMSSNFLG-LEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNG 148 (306)
T ss_dssp EHHHHSCSCCCEEECCSCSEE-EEEEEEET-CTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTT
T ss_pred ccccccccccCEEECCCCccc-cChhhcCC-CCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhccc
Confidence 555556677777777777666 35555443 4477777777777776554 56777888888888888887777777788
Q ss_pred CccccEEEcccccccc-cccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccE
Q 047196 242 LTILRKISLRNNKLRG-EIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVER 320 (827)
Q Consensus 242 l~~L~~L~Ls~N~l~~-~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 320 (827)
+++|++|++++|.+++ .+|..+..+++|++|+|++|++++..|..+.++++|+.|++++|.+.+..+..+. .+++|+.
T Consensus 149 l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~ 227 (306)
T 2z66_A 149 LSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK-CLNSLQV 227 (306)
T ss_dssp CTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGT-TCTTCCE
T ss_pred CcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhcc-CcccCCE
Confidence 8888888888888776 5677778888888888888888877777777777777777777776654443333 5677777
Q ss_pred EeCcCCccccccCccccCCC-CCcEEEcCCCccee
Q 047196 321 LNLGLNRFSGTIPSFITNAS-KLVYLDMGTNSFSG 354 (827)
Q Consensus 321 L~L~~N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~g 354 (827)
|++++|++++..|..+..++ +|++|++++|.+++
T Consensus 228 L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~ 262 (306)
T 2z66_A 228 LDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFAC 262 (306)
T ss_dssp EECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEEC
T ss_pred eECCCCCCcccCHHHHHhhhccCCEEEccCCCeec
Confidence 77777777777777777663 77777777777664
No 55
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.96 E-value=4.1e-28 Score=260.27 Aligned_cols=281 Identities=20% Similarity=0.225 Sum_probs=160.0
Q ss_pred cEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCccc--CchhhhcCCCccEEEec
Q 047196 222 QLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGV--VPAAIFNMSTVKKIYLL 299 (827)
Q Consensus 222 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~--~p~~~~~l~~L~~L~l~ 299 (827)
+.++++++.++ .+|..+. ++|++|+|++|+++...+..|..+++|++|+|++|+++.. .|..+..
T Consensus 10 ~~l~c~~~~l~-~ip~~~~--~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~---------- 76 (306)
T 2z66_A 10 TEIRCNSKGLT-SVPTGIP--SSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFG---------- 76 (306)
T ss_dssp TEEECCSSCCS-SCCSCCC--TTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHS----------
T ss_pred CEEEcCCCCcc-cCCCCCC--CCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCccccccc----------
Confidence 46777777776 4455443 5677888888887744444467777788888877777632 2444443
Q ss_pred CCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhccc
Q 047196 300 DNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLS 379 (827)
Q Consensus 300 ~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~ 379 (827)
+++|++|++++|+++. +|..+..+++|++|++++|.+++..+. ..+..+.
T Consensus 77 ---------------~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~--------------~~~~~l~ 126 (306)
T 2z66_A 77 ---------------TTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEF--------------SVFLSLR 126 (306)
T ss_dssp ---------------CSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTT--------------TTTTTCT
T ss_pred ---------------ccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccc--------------hhhhhcc
Confidence 4455555555555552 444455666666666666665543220 1122222
Q ss_pred ccccEEEccCCcCccccCccccCCCCCceEeccCccccc-cccccccCCCCCcEEECCCCCCCCCCCccccccccccEEe
Q 047196 380 MSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTG-SIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLG 458 (827)
Q Consensus 380 ~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g-~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 458 (827)
+|++|++++|.+++..|..+..+++|+.|++++|++++ .+|..+..+++|++|++++|++++..|..+..+++|+.|+
T Consensus 127 -~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 205 (306)
T 2z66_A 127 -NLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 205 (306)
T ss_dssp -TCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred -CCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEE
Confidence 56666666666666666666666666666666666665 4556666666666666666666655566666666666666
Q ss_pred cCCCcccccCCccccCCCCCCccccCCCcccccCCcccccc-ccccccCCCCCCCCCCCcc--cccccccCceEEcccce
Q 047196 459 LAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNL-KDILFFDLSSNSLDGPLSL--DIGNLRVVIGINLSRNN 535 (827)
Q Consensus 459 Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l-~~L~~LdLs~N~l~g~~p~--~~~~l~~L~~L~Ls~N~ 535 (827)
+++|++++..+..+..+++|++||+++|.+++..|..+..+ ++|++|+|++|.+++..+. ....++..+.+....+.
T Consensus 206 L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~L~~N~~~~~c~~~~~~~~l~~~~~~~~~~~~ 285 (306)
T 2z66_A 206 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACTCEHQSFLQWIKDQRQLLVEVER 285 (306)
T ss_dssp CTTSCCSBCCSGGGTTCTTCCEEECTTSCCCBCSSSSCCCCCTTCCEEECTTCCEECSGGGHHHHHHHHHTGGGBSCGGG
T ss_pred CCCCccCccChhhccCcccCCEeECCCCCCcccCHHHHHhhhccCCEEEccCCCeecccChHHHHHHHHhhhhhhccccc
Confidence 66666665444455556666666666666666555555555 2555555555555543211 11122223333444455
Q ss_pred eeecccccccC
Q 047196 536 FSGDIPSTIGD 546 (827)
Q Consensus 536 l~g~ip~~~~~ 546 (827)
+.+..|+.+.+
T Consensus 286 ~~C~~p~~~~g 296 (306)
T 2z66_A 286 MECATPSDKQG 296 (306)
T ss_dssp CBEEESGGGTT
T ss_pred cccCCchhhCC
Confidence 55555554443
No 56
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=3.7e-30 Score=276.88 Aligned_cols=267 Identities=16% Similarity=0.135 Sum_probs=173.1
Q ss_pred CCCCCCCCCCCCcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCC-CccCChhhh-------hcc
Q 047196 75 LAQNSTSNTSVCNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKL-SGDIPPSIF-------TMH 146 (827)
Q Consensus 75 l~~w~~~~~~~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l-~g~~p~~~~-------~l~ 146 (827)
...|. ....|+.|..+.......+++.|++++|.+ .+|..+... |++|+|++|.+ .+.+|..+. +++
T Consensus 21 ~~~~~-~~~~c~~~~~~~~~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~ 95 (312)
T 1wwl_A 21 KPDWS-SAFNCLGAADVELYGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAARIPSRILFGALRVLGIS 95 (312)
T ss_dssp SCCGG-GGGGSSSCSEEEEEEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEEECBHHHHHHHHHHHTTS
T ss_pred ccchH-HHhhhhccccEEEEccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCCCcCHHHHHHHHHhcCcC
Confidence 34565 344566665544322234677777888887 666655544 77888888888 456777665 678
Q ss_pred ccceEEecCCCCCCcccccc--CCCCCCcEEEcCCCCCCCCcchhHhhc----cccccEEEeecccccccCCccCCCCCC
Q 047196 147 KLKFLDFSDNQLSGSLSSVT--FNLSSVLDIRLDSDKLSGELPVNICNY----LHYLKVLFLAKNMFHGQIPLALSKCKR 220 (827)
Q Consensus 147 ~L~~LdLs~N~l~g~~p~~~--~~l~~L~~L~L~~n~l~g~ip~~~~~~----~~~L~~L~Ls~N~l~~~~p~~l~~l~~ 220 (827)
+|++|+|++|++++.+|..+ ..+++|++|+|++|.+++. |..+... .++|++|+|++|++++..|..|+++++
T Consensus 96 ~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~ 174 (312)
T 1wwl_A 96 GLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPA 174 (312)
T ss_dssp CCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSS
T ss_pred CccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCC
Confidence 88888888888888777765 7788888888888888765 6555543 157777777777777777777777777
Q ss_pred CcEEEccCCCCccc--CCCcC--cCCccccEEEcccccccc--ccc-ccccCcCCCcEEEeecccCcccCc-hhhhcCCC
Q 047196 221 LQLLNLGFKKLSGA--IPKEI--SNLTILRKISLRNNKLRG--EIP-HEIGYLPNLENLVLGFNNLVGVVP-AAIFNMST 292 (827)
Q Consensus 221 L~~L~L~~n~l~~~--~p~~~--~~l~~L~~L~Ls~N~l~~--~~p-~~~~~l~~L~~L~Ls~N~l~~~~p-~~~~~l~~ 292 (827)
|++|++++|++.+. +|..+ +++++|++|+|++|++++ .++ ..+..+++|++|+|++|++++..| ..+..+++
T Consensus 175 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~ 254 (312)
T 1wwl_A 175 LSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQ 254 (312)
T ss_dssp CCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTT
T ss_pred CCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCC
Confidence 77777777776654 23333 667777777777777762 222 233566777777777777776654 33444566
Q ss_pred ccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcce
Q 047196 293 VKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFS 353 (827)
Q Consensus 293 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 353 (827)
|++|++++|.++ .+|..+. ++|++|+|++|++++. |. +..+++|++|++++|.++
T Consensus 255 L~~L~Ls~N~l~-~ip~~~~---~~L~~L~Ls~N~l~~~-p~-~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 255 LNSLNLSFTGLK-QVPKGLP---AKLSVLDLSYNRLDRN-PS-PDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp CCEEECTTSCCS-SCCSSCC---SEEEEEECCSSCCCSC-CC-TTTSCEEEEEECTTCTTT
T ss_pred CCEEECCCCccC-hhhhhcc---CCceEEECCCCCCCCC-hh-HhhCCCCCEEeccCCCCC
Confidence 666666666665 4444332 5566666666666554 43 555566666666655554
No 57
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.95 E-value=2.3e-28 Score=284.62 Aligned_cols=107 Identities=26% Similarity=0.364 Sum_probs=61.2
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|+.|++++|.++. +|.. +++|+.|++++|++++ +| ..+++|+.|+|++|+++ .+|. .+++|+.|+|+
T Consensus 202 ~L~~L~L~~N~l~~-l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls 269 (622)
T 3g06_A 202 ELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVY 269 (622)
T ss_dssp TCCEEECCSSCCSS-CCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECC
T ss_pred hhhEEECcCCcccc-cCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCC
Confidence 45555555555552 3322 3556666666666664 33 33456666666666665 3444 34566666666
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLK 500 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~ 500 (827)
+|+++ .+|..+.++++|+.|+|++|.+++..|..+..++
T Consensus 270 ~N~L~-~lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~~L~ 308 (622)
T 3g06_A 270 RNQLT-RLPESLIHLSSETTVNLEGNPLSERTLQALREIT 308 (622)
T ss_dssp SSCCC-SCCGGGGGSCTTCEEECCSCCCCHHHHHHHHHHH
T ss_pred CCCCC-cCCHHHhhccccCEEEecCCCCCCcCHHHHHhcc
Confidence 66666 5566666666666666666666666555544443
No 58
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.95 E-value=2.6e-28 Score=267.34 Aligned_cols=258 Identities=16% Similarity=0.117 Sum_probs=147.5
Q ss_pred cccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEee
Q 047196 196 YLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLG 275 (827)
Q Consensus 196 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 275 (827)
+|++|++++|.+++..+..+.++++|++|++++|.+++..|..|+++++|++|++++|++++..+..++.+++|++|+|+
T Consensus 53 ~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 132 (353)
T 2z80_A 53 AVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLL 132 (353)
T ss_dssp TCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECT
T ss_pred cCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECC
Confidence 67777777777776666677778888888888888877777777778888888888888775555557777888888888
Q ss_pred cccCcccCc-hhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCccee
Q 047196 276 FNNLVGVVP-AAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSG 354 (827)
Q Consensus 276 ~N~l~~~~p-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 354 (827)
+|++++..+ ..+.++++|++|++++|...+.++......+++|++|++++|++++..|..+..+++|++|++++|.++.
T Consensus 133 ~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~ 212 (353)
T 2z80_A 133 GNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHIL 212 (353)
T ss_dssp TCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTT
T ss_pred CCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCcccc
Confidence 887775433 3566666666666666643333332222355566666666666665556566555555555555555431
Q ss_pred ecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEE
Q 047196 355 IIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLY 434 (827)
Q Consensus 355 ~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 434 (827)
. |..+.....+|++|++++|++++..+..+.. ......++.++
T Consensus 213 ~----------------~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~---------------------~~~~~~l~~l~ 255 (353)
T 2z80_A 213 L----------------LEIFVDVTSSVECLELRDTDLDTFHFSELST---------------------GETNSLIKKFT 255 (353)
T ss_dssp H----------------HHHHHHHTTTEEEEEEESCBCTTCCCC---------------------------CCCCCCEEE
T ss_pred c----------------hhhhhhhcccccEEECCCCcccccccccccc---------------------ccccchhhccc
Confidence 1 1111111114555555555554433322211 11233444444
Q ss_pred CCCCCCCC----CCCccccccccccEEecCCCcccccCCcc-ccCCCCCCccccCCCccccc
Q 047196 435 LPFNKLAG----SIPDQLCHLARLNTLGLAGNKFSGSIPSC-LGNLTSLRSPDLGSNRLTSV 491 (827)
Q Consensus 435 Ls~N~l~g----~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~-~~~l~~L~~L~Ls~N~l~~~ 491 (827)
|++|.+++ .+|..+..+++|+.|++++|+++ .+|.. +..+++|++|++++|.+.+.
T Consensus 256 L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~ 316 (353)
T 2z80_A 256 FRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCS 316 (353)
T ss_dssp EESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred cccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCc
Confidence 44444443 24444555555555555555555 34433 35555666666666655543
No 59
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.95 E-value=2.2e-29 Score=270.85 Aligned_cols=252 Identities=19% Similarity=0.199 Sum_probs=159.5
Q ss_pred ccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHh------
Q 047196 118 LGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNIC------ 191 (827)
Q Consensus 118 l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~------ 191 (827)
++..++|++|++++|.+ .+|..+... |++|+|++|++... .+|..+.
T Consensus 39 ~~~~~~L~~l~l~~n~l--~~p~~~~~~--L~~L~L~~n~l~~~-----------------------~~~~~~~~~~~~~ 91 (312)
T 1wwl_A 39 YGGGRSLEYLLKRVDTE--ADLGQFTDI--IKSLSLKRLTVRAA-----------------------RIPSRILFGALRV 91 (312)
T ss_dssp EEEEEECTTHHHHCCTT--CCCHHHHHH--HHHCCCCEEEEEEE-----------------------ECBHHHHHHHHHH
T ss_pred EccCCCceeEeeccccc--ccHHHHHHH--HhhcccccccccCC-----------------------CcCHHHHHHHHHh
Confidence 56677888999999998 788877766 88889998888421 2343332
Q ss_pred hccccccEEEeecccccccCCccC--CCCCCCcEEEccCCCCcccCCCcCcCC-----ccccEEEccccccccccccccc
Q 047196 192 NYLHYLKVLFLAKNMFHGQIPLAL--SKCKRLQLLNLGFKKLSGAIPKEISNL-----TILRKISLRNNKLRGEIPHEIG 264 (827)
Q Consensus 192 ~~~~~L~~L~Ls~N~l~~~~p~~l--~~l~~L~~L~L~~n~l~~~~p~~~~~l-----~~L~~L~Ls~N~l~~~~p~~~~ 264 (827)
..+++|++|+|++|.+++.+|..+ +.+++|++|++++|.+++. |..++.+ ++|++|+|++|++++..|..|+
T Consensus 92 ~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~ 170 (312)
T 1wwl_A 92 LGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVR 170 (312)
T ss_dssp HTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCC
T ss_pred cCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhc
Confidence 013477788888888777777765 7777888888888887766 6666666 7777777777777776667777
Q ss_pred CcCCCcEEEeecccCcccC--chhh--hcCCCccEEEecCCcccc--ccChhhhcCCCCccEEeCcCCccccccC-cccc
Q 047196 265 YLPNLENLVLGFNNLVGVV--PAAI--FNMSTVKKIYLLDNSLLG--SFSLGIDLSLPNVERLNLGLNRFSGTIP-SFIT 337 (827)
Q Consensus 265 ~l~~L~~L~Ls~N~l~~~~--p~~~--~~l~~L~~L~l~~n~l~~--~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~ 337 (827)
.+++|++|+|++|++.+.+ |..+ .++++|++|++++|.+.+ .++..++..+++|++|++++|++++.+| ..+.
T Consensus 171 ~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~ 250 (312)
T 1wwl_A 171 VFPALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCD 250 (312)
T ss_dssp CCSSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCC
T ss_pred cCCCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhh
Confidence 7777777777777776542 2233 445555555555555442 2222222234444555555444444332 2222
Q ss_pred CCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCcccc
Q 047196 338 NASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLT 417 (827)
Q Consensus 338 ~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 417 (827)
.++ +|++|++++|+++ .+|..+. ++|+.|||++|+++
T Consensus 251 ~l~----------------------------------------~L~~L~Ls~N~l~-~ip~~~~--~~L~~L~Ls~N~l~ 287 (312)
T 1wwl_A 251 WPS----------------------------------------QLNSLNLSFTGLK-QVPKGLP--AKLSVLDLSYNRLD 287 (312)
T ss_dssp CCT----------------------------------------TCCEEECTTSCCS-SCCSSCC--SEEEEEECCSSCCC
T ss_pred hcC----------------------------------------CCCEEECCCCccC-hhhhhcc--CCceEEECCCCCCC
Confidence 333 4556666666665 4555444 66666777777666
Q ss_pred ccccccccCCCCCcEEECCCCCCCC
Q 047196 418 GSIPVTFGRLQKLQGLYLPFNKLAG 442 (827)
Q Consensus 418 g~~p~~~~~l~~L~~L~Ls~N~l~g 442 (827)
+. |. +..+++|++|+|++|.+++
T Consensus 288 ~~-p~-~~~l~~L~~L~L~~N~l~~ 310 (312)
T 1wwl_A 288 RN-PS-PDELPQVGNLSLKGNPFLD 310 (312)
T ss_dssp SC-CC-TTTSCEEEEEECTTCTTTC
T ss_pred CC-hh-HhhCCCCCEEeccCCCCCC
Confidence 55 44 6667777777777776664
No 60
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=4.9e-27 Score=266.20 Aligned_cols=234 Identities=23% Similarity=0.305 Sum_probs=183.2
Q ss_pred cCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhc
Q 047196 114 IPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNY 193 (827)
Q Consensus 114 ~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~ 193 (827)
+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|++++..+..+.++++|++|+|++|.++ .+|...+..
T Consensus 69 iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~~ 145 (452)
T 3zyi_A 69 VPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLT-VIPSGAFEY 145 (452)
T ss_dssp CCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCS-BCCTTTSSS
T ss_pred cCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCC-ccChhhhcc
Confidence 444443 57888888888888877888888888888888888888877778888888888888888887 466655555
Q ss_pred cccccEEEeecccccccCCccCCCCCCCcEEEccCC-CCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEE
Q 047196 194 LHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFK-KLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENL 272 (827)
Q Consensus 194 ~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 272 (827)
+++|++|+|++|.++...+..|.++++|+.|++++| .+....+..|.++++|++|+|++|++++ +| .+..+++|++|
T Consensus 146 l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L 223 (452)
T 3zyi_A 146 LSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP-NLTPLVGLEEL 223 (452)
T ss_dssp CTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC-CCTTCTTCCEE
T ss_pred cCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc-cccccccccEE
Confidence 668888888888888777778888888888888884 4444444568888888888888888874 34 57788888888
Q ss_pred EeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcc
Q 047196 273 VLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSF 352 (827)
Q Consensus 273 ~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 352 (827)
+|++|++++..|..+.++++|+.|++++|.+.+..+..+. .+++|+.|+|++|++++..+..+..+++|+.|++++|.+
T Consensus 224 ~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 224 EMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFD-GLASLVELNLAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp ECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTT-TCTTCCEEECCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred ECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhc-CCCCCCEEECCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 8888888888888888888888888888887766555544 678888888888888877777778888888888888876
Q ss_pred e
Q 047196 353 S 353 (827)
Q Consensus 353 ~ 353 (827)
.
T Consensus 303 ~ 303 (452)
T 3zyi_A 303 N 303 (452)
T ss_dssp E
T ss_pred C
Confidence 5
No 61
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=99.95 E-value=3.1e-28 Score=261.60 Aligned_cols=150 Identities=23% Similarity=0.430 Sum_probs=113.6
Q ss_pred hcccccceEecCCceEEEEEEec------CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
++|...++||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..++
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 120 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLM 120 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEE
Confidence 45667789999999999999864 478899999987766677889999999999999999999999988775544
Q ss_pred --eeeccC-----------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------
Q 047196 749 --DCLHST-----------------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------- 796 (827)
Q Consensus 749 --~~l~~~-----------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------- 796 (827)
+++..+ ...++|.+++.|+.|||+||+||| +++||||||||+|||
T Consensus 121 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLKp~NILl~~~~~~ 197 (329)
T 4aoj_A 121 VFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLA---GLHFVHRDLATRNCLVGQGLVV 197 (329)
T ss_dssp EEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecccccHhhEEECCCCcE
Confidence 333211 124788999999999999999996 467999999999998
Q ss_pred ---eecccccccCCCcc-ccccceecccccccccC
Q 047196 797 ---DFGIGRLLTGDRSM-IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ---DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l 827 (827)
|||+|+.+...... ..+..+||++|||||++
T Consensus 198 Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~ 232 (329)
T 4aoj_A 198 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESI 232 (329)
T ss_dssp EECCCC----------------CCCCGGGCCHHHH
T ss_pred EEcccccceeccCCCcceecCcccccccccChhhh
Confidence 99999977543322 22335699999999974
No 62
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=99.95 E-value=3.2e-28 Score=257.86 Aligned_cols=150 Identities=27% Similarity=0.432 Sum_probs=119.5
Q ss_pred hcccccceEecCCceEEEEEEec------CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH------DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
++|...+.||+|+||+||+|++. +|+.||||+++.......++|.+|+++|++++|||||+++|+|.+++..++
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~l 92 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 92 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEE
Confidence 45777889999999999999863 478899999987666677889999999999999999999999988765544
Q ss_pred --eeeccC---------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------
Q 047196 749 --DCLHST---------------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------- 796 (827)
Q Consensus 749 --~~l~~~---------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------- 796 (827)
+++..+ ...++|.++..|+.|||+||+||| +++||||||||+|||
T Consensus 93 V~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDlKp~NILl~~~~~~Ki 169 (299)
T 4asz_A 93 VFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLA---SQHFVHRDLATRNCLVGENLLVKI 169 (299)
T ss_dssp EEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEE
T ss_pred EEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCccCHhhEEECCCCcEEE
Confidence 333221 135788999999999999999996 568999999999998
Q ss_pred -eecccccccCCCccc-cccceecccccccccC
Q 047196 797 -DFGIGRLLTGDRSMI-QTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 -DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l 827 (827)
|||+|+......... .....||++|||||++
T Consensus 170 ~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~ 202 (299)
T 4asz_A 170 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESI 202 (299)
T ss_dssp CCCSCHHHHTGGGCEEETTTEEECGGGCCHHHH
T ss_pred CCcccceecCCCCceeecCceecChhhcCHHHH
Confidence 999999765433222 2234599999999974
No 63
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.95 E-value=9.7e-29 Score=266.44 Aligned_cols=169 Identities=21% Similarity=0.188 Sum_probs=90.6
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCcccc-ccccccEEec
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLC-HLARLNTLGL 459 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~L 459 (827)
+|++|++++|++++..+.. +++|+.|++++|++++..|..++.+++|++|+|++|++++..|..+. .+++|++|++
T Consensus 100 ~L~~L~l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L 176 (317)
T 3o53_A 100 SIETLHAANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNL 176 (317)
T ss_dssp TCCEEECCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEEC
T ss_pred CcCEEECCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEEC
Confidence 4555555555555433322 34555666666666555555555555666666666655554444442 4555666666
Q ss_pred CCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceee-e
Q 047196 460 AGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFS-G 538 (827)
Q Consensus 460 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-g 538 (827)
++|++++. |. ...+++|++|+|++|.+++..+ .+..+++|+.|+|++|.+++ +|..+..++.|+.|++++|+++ +
T Consensus 177 ~~N~l~~~-~~-~~~l~~L~~L~Ls~N~l~~l~~-~~~~l~~L~~L~L~~N~l~~-l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 177 QYNFIYDV-KG-QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVL-IEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp TTSCCCEE-EC-CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCE-ECTTCCCCTTCCEEECTTCCCBHH
T ss_pred CCCcCccc-cc-ccccccCCEEECCCCcCCcchh-hhcccCcccEEECcCCcccc-hhhHhhcCCCCCEEEccCCCccCc
Confidence 66665543 21 2235566666666666654332 35555555555555555552 4445555555555555555555 4
Q ss_pred cccccccCCCCCCEEECC
Q 047196 539 DIPSTIGDLKDLQNISLA 556 (827)
Q Consensus 539 ~ip~~~~~l~~L~~L~Ls 556 (827)
.+|..++.++.|+.|+++
T Consensus 253 ~~~~~~~~~~~L~~l~l~ 270 (317)
T 3o53_A 253 TLRDFFSKNQRVQTVAKQ 270 (317)
T ss_dssp HHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHhccccceEEECC
Confidence 555555555555555554
No 64
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.95 E-value=2e-26 Score=261.07 Aligned_cols=228 Identities=21% Similarity=0.215 Sum_probs=146.5
Q ss_pred ccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEe
Q 047196 195 HYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVL 274 (827)
Q Consensus 195 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 274 (827)
+++++|+|++|.+++..|..|.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..+..|..+++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 37889999999998888888999999999999999999888888999999999999999998777777888999999999
Q ss_pred ecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCccee
Q 047196 275 GFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSG 354 (827)
Q Consensus 275 s~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 354 (827)
++|+++...+..+.++++|+.|++++|+..+.++. ..+.++++|++|++++|++++
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~------------------------~~~~~l~~L~~L~L~~n~l~~ 210 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISE------------------------GAFEGLFNLKYLNLGMCNIKD 210 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECT------------------------TTTTTCTTCCEEECTTSCCSS
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccCh------------------------hhccCCCCCCEEECCCCcccc
Confidence 99998876666666666666666665444333333 234445555555555554432
Q ss_pred ecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEE
Q 047196 355 IIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLY 434 (827)
Q Consensus 355 ~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 434 (827)
. | .+..+. +|++|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+
T Consensus 211 ~-~----------------~~~~l~-~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 272 (452)
T 3zyi_A 211 M-P----------------NLTPLV-GLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDGLASLVELN 272 (452)
T ss_dssp C-C----------------CCTTCT-TCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred c-c----------------cccccc-cccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcCCCCCCEEE
Confidence 1 1 011111 445555555555544455555555555555555555555455555555555555
Q ss_pred CCCCCCCCCCCccccccccccEEecCCCcc
Q 047196 435 LPFNKLAGSIPDQLCHLARLNTLGLAGNKF 464 (827)
Q Consensus 435 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 464 (827)
|++|++++..+..+..+++|+.|+|++|.+
T Consensus 273 L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~ 302 (452)
T 3zyi_A 273 LAHNNLSSLPHDLFTPLRYLVELHLHHNPW 302 (452)
T ss_dssp CCSSCCSCCCTTSSTTCTTCCEEECCSSCE
T ss_pred CCCCcCCccChHHhccccCCCEEEccCCCc
Confidence 555555444444444444444444444444
No 65
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.94 E-value=2.5e-28 Score=263.28 Aligned_cols=267 Identities=19% Similarity=0.144 Sum_probs=132.5
Q ss_pred cEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecc
Q 047196 198 KVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFN 277 (827)
Q Consensus 198 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 277 (827)
+..+++.+.+...++..+..+++|++|++++|.+++..|..+.++++|++|+|++|++++..| +..+++|++|+|++|
T Consensus 13 ~i~~ls~~~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n 90 (317)
T 3o53_A 13 KIEKVTDSSLKQALASLRQSAWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNN 90 (317)
T ss_dssp EEESCCTTTHHHHHHHHHTTGGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSS
T ss_pred eEeeccccchhhhHHHHhccCCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCC
Confidence 333444444433333333344445555555555554444445555555555555555544332 445555555555555
Q ss_pred cCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecC
Q 047196 278 NLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIP 357 (827)
Q Consensus 278 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p 357 (827)
++++.. ..++|+.|++++|.+.+..+. .+++|+.|++++|++++..|..+..+++|++|++++|
T Consensus 91 ~l~~l~-----~~~~L~~L~l~~n~l~~~~~~----~~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N------- 154 (317)
T 3o53_A 91 YVQELL-----VGPSIETLHAANNNISRVSCS----RGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLN------- 154 (317)
T ss_dssp EEEEEE-----ECTTCCEEECCSSCCSEEEEC----CCSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTS-------
T ss_pred cccccc-----CCCCcCEEECCCCccCCcCcc----ccCCCCEEECCCCCCCCccchhhhccCCCCEEECCCC-------
Confidence 544321 113333333333333322111 2344555555555555544444444444444444444
Q ss_pred CCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccc-cCCCCCceEeccCccccccccccccCCCCCcEEECC
Q 047196 358 NTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLI-SNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLP 436 (827)
Q Consensus 358 ~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 436 (827)
.+++..|..+ ..+++|++|+|++|++++.. ....+++|++|+|+
T Consensus 155 ---------------------------------~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~--~~~~l~~L~~L~Ls 199 (317)
T 3o53_A 155 ---------------------------------EIDTVNFAELAASSDTLEHLNLQYNFIYDVK--GQVVFAKLKTLDLS 199 (317)
T ss_dssp ---------------------------------CCCEEEGGGGGGGTTTCCEEECTTSCCCEEE--CCCCCTTCCEEECC
T ss_pred ---------------------------------CCCcccHHHHhhccCcCCEEECCCCcCcccc--cccccccCCEEECC
Confidence 4444433333 24555555555555555432 12235566666666
Q ss_pred CCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCccc-ccCCccccccccccccCCC-CCCCCC
Q 047196 437 FNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLT-SVLPSTFWNLKDILFFDLS-SNSLDG 514 (827)
Q Consensus 437 ~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~LdLs-~N~l~g 514 (827)
+|++++ +|..+..+++|+.|++++|+++ .+|..+..+++|+.|++++|.+. +.+|..+..++.|+.++++ .+.++|
T Consensus 200 ~N~l~~-l~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~l~~L~~L~l~~N~~~~~~~~~~~~~~~~L~~l~l~~~~~l~~ 277 (317)
T 3o53_A 200 SNKLAF-MGPEFQSAAGVTWISLRNNKLV-LIEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQTVKKLTG 277 (317)
T ss_dssp SSCCCE-ECGGGGGGTTCSEEECTTSCCC-EECTTCCCCTTCCEEECTTCCCBHHHHHHHHHTCHHHHHHHHHHHHHHHS
T ss_pred CCcCCc-chhhhcccCcccEEECcCCccc-chhhHhhcCCCCCEEEccCCCccCcCHHHHHhccccceEEECCCchhccC
Confidence 666653 3334556666666666666665 35555666666666666666666 5556666666666666666 334455
Q ss_pred CCccc
Q 047196 515 PLSLD 519 (827)
Q Consensus 515 ~~p~~ 519 (827)
..|..
T Consensus 278 ~~~~~ 282 (317)
T 3o53_A 278 QNEEE 282 (317)
T ss_dssp SSSCC
T ss_pred Cchhc
Confidence 44433
No 66
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=3e-26 Score=258.74 Aligned_cols=242 Identities=23% Similarity=0.307 Sum_probs=190.3
Q ss_pred cCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCC
Q 047196 105 ISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSG 184 (827)
Q Consensus 105 L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g 184 (827)
.++.+++ .+|..+. +++++|+|++|++++..+..|.++++|++|+|++|.+++..+..+.++++|++|+|++|+++
T Consensus 50 c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~- 125 (440)
T 3zyj_A 50 CVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLT- 125 (440)
T ss_dssp CCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCS-
T ss_pred eCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCC-
Confidence 3344454 3455444 67888899999888888888888889999999999888877788888888888888888887
Q ss_pred CcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCC-CCcccCCCcCcCCccccEEEcccccccccccccc
Q 047196 185 ELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFK-KLSGAIPKEISNLTILRKISLRNNKLRGEIPHEI 263 (827)
Q Consensus 185 ~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n-~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 263 (827)
.+|...+..+++|++|+|++|.++...+..|.++++|+.|++++| .++...+..|.++++|++|+|++|+++ .+| .+
T Consensus 126 ~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~-~~ 203 (440)
T 3zyj_A 126 TIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIP-NL 203 (440)
T ss_dssp SCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCC-CC
T ss_pred eeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-ccc-cc
Confidence 466655555668888888888888777778888899999999884 444444456888889999999999887 455 47
Q ss_pred cCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCc
Q 047196 264 GYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLV 343 (827)
Q Consensus 264 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 343 (827)
..+++|++|+|++|++++..|..|.++++|+.|++++|.+.+..+..+. .+++|+.|+|++|++++..+..+..+++|+
T Consensus 204 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 282 (440)
T 3zyj_A 204 TPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFD-NLQSLVEINLAHNNLTLLPHDLFTPLHHLE 282 (440)
T ss_dssp TTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSST-TCTTCCEEECTTSCCCCCCTTTTSSCTTCC
T ss_pred CCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhc-CCCCCCEEECCCCCCCccChhHhccccCCC
Confidence 8888899999999988888888888888888888888887766554443 678888888888888877777778888888
Q ss_pred EEEcCCCcce
Q 047196 344 YLDMGTNSFS 353 (827)
Q Consensus 344 ~L~Ls~N~l~ 353 (827)
.|++++|.+.
T Consensus 283 ~L~L~~Np~~ 292 (440)
T 3zyj_A 283 RIHLHHNPWN 292 (440)
T ss_dssp EEECCSSCEE
T ss_pred EEEcCCCCcc
Confidence 8888888764
No 67
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=99.94 E-value=7.5e-28 Score=255.06 Aligned_cols=148 Identities=26% Similarity=0.503 Sum_probs=113.8
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc-eeeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF-KALDCL 751 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~-~~l~~l 751 (827)
+++...+.||+|+||+||+|++++ .||||+++.. .....++|.+|++++++++|||||+++|+|.++.. .+++++
T Consensus 36 ~~l~l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~ 113 (307)
T 3omv_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWC 113 (307)
T ss_dssp TSCCEEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred HHeEEeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEECCeEEEEEEcC
Confidence 456777899999999999998764 6999998643 34556789999999999999999999999976553 233333
Q ss_pred cc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc-c
Q 047196 752 HS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM-I 811 (827)
Q Consensus 752 ~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~-~ 811 (827)
.. ....++|.++..|+.|||+||+||| +++||||||||+||| |||+|+........ .
T Consensus 114 ~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH---~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~ 190 (307)
T 3omv_A 114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp SSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCSSSEEEETTEEEEECCCSSCBC---------
T ss_pred CCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCccCHHHEEECCCCcEEEeeccCceecccCCccee
Confidence 22 2346889999999999999999996 468999999999998 99999876543222 2
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
....+||++|||||++
T Consensus 191 ~~~~~GT~~ymAPE~l 206 (307)
T 3omv_A 191 VEQPTGSVLWMAPEVI 206 (307)
T ss_dssp ---CCCCTTSCCHHHH
T ss_pred ecccccCCCccCHHHh
Confidence 2335699999999974
No 68
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=7.6e-27 Score=247.66 Aligned_cols=207 Identities=23% Similarity=0.227 Sum_probs=118.2
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCcc-ccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEec
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNK-LTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGL 459 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 459 (827)
+|++|++++|.+++..|..|..+++|++|++++|+ +.+..|..|..+++|++|++++|.+++..|..+.++++|++|++
T Consensus 57 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 136 (285)
T 1ozn_A 57 NLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYL 136 (285)
T ss_dssp TCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEEC
Confidence 34444444444444444455555555555555554 44444555555555555555555555555555555555666666
Q ss_pred CCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeec
Q 047196 460 AGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGD 539 (827)
Q Consensus 460 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ 539 (827)
++|++++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+++..|..++.++.|+.|++++|++++.
T Consensus 137 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~ 216 (285)
T 1ozn_A 137 QDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSAL 216 (285)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCC
T ss_pred CCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcC
Confidence 66655544444455556666666666666555555555566666666666666665566666666666666666666655
Q ss_pred ccccccCCCCCCEEECCCCcceeecCCC--CcCCceEeCcCCcCeecCCC
Q 047196 540 IPSTIGDLKDLQNISLACNGLEGLIPES--FGYLTELNLSFNKLEGEIPR 587 (827)
Q Consensus 540 ip~~~~~l~~L~~L~Ls~N~l~g~ip~~--~~~L~~L~ls~N~l~g~ip~ 587 (827)
.+..+..+++|+.|++++|.+....+.. +..++.++.+.|.+.+..|.
T Consensus 217 ~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~~p~ 266 (285)
T 1ozn_A 217 PTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCSLPQ 266 (285)
T ss_dssp CHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEEESG
T ss_pred CHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccCCch
Confidence 5555666666666666666665543321 12344455666777766665
No 69
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.94 E-value=5.3e-27 Score=248.83 Aligned_cols=254 Identities=18% Similarity=0.162 Sum_probs=180.4
Q ss_pred EEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCC
Q 047196 101 TALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSD 180 (827)
Q Consensus 101 ~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n 180 (827)
+.++.++++++. +|..+ .++|++|+|++|++++..+..|..+++|++|+|++|.+++..|..+.++++|++|++++|
T Consensus 14 ~~~~c~~~~l~~-ip~~~--~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 90 (285)
T 1ozn_A 14 VTTSCPQQGLQA-VPVGI--PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDN 90 (285)
T ss_dssp CEEECCSSCCSS-CCTTC--CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSC
T ss_pred eEEEcCcCCccc-CCcCC--CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCC
Confidence 455666666653 34333 457888888888888766677888888888888888888777777888888888888888
Q ss_pred CCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEccccccccccc
Q 047196 181 KLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIP 260 (827)
Q Consensus 181 ~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 260 (827)
...+.++...+..+++|++|++++|.+++..|..+.++++|++|++++|.+++..+..++++++|++|++++|++++..+
T Consensus 91 ~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~ 170 (285)
T 1ozn_A 91 AQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170 (285)
T ss_dssp TTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECT
T ss_pred CCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCH
Confidence 73334544334445588888888888887777778888888888888888887666677888888888888888876666
Q ss_pred ccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCC
Q 047196 261 HEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNAS 340 (827)
Q Consensus 261 ~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 340 (827)
..+..+++|++|+|++|.+++..|..+.++++|+.|++++|.+.+..+..+ ..+++|+.|++++|.+....+.. .-..
T Consensus 171 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~-~~l~~L~~L~l~~N~~~c~~~~~-~~~~ 248 (285)
T 1ozn_A 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEAL-APLRALQYLRLNDNPWVCDCRAR-PLWA 248 (285)
T ss_dssp TTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCHHHH-TTCTTCCEEECCSSCEECSGGGH-HHHH
T ss_pred HHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCcCCcCCHHHc-ccCcccCEEeccCCCccCCCCcH-HHHH
Confidence 667888888888888888888878888888888888888888776433333 37788888888888877543321 1111
Q ss_pred CCcEEEcCCCcceeecCCC
Q 047196 341 KLVYLDMGTNSFSGIIPNT 359 (827)
Q Consensus 341 ~L~~L~Ls~N~l~g~~p~~ 359 (827)
.++.+..+.+.+....|..
T Consensus 249 ~l~~~~~~~~~~~c~~p~~ 267 (285)
T 1ozn_A 249 WLQKFRGSSSEVPCSLPQR 267 (285)
T ss_dssp HHHHCCSEECCCBEEESGG
T ss_pred HHHhcccccCccccCCchH
Confidence 2333345556666666643
No 70
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.94 E-value=6.7e-26 Score=255.92 Aligned_cols=107 Identities=26% Similarity=0.335 Sum_probs=63.1
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|++|++++|+++ .+| .+..+++|+.|+|++|++++..|..|.++++|+.|+|++|++++..|..|.++++|+.|+|+
T Consensus 186 ~L~~L~L~~n~l~-~~~-~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 263 (440)
T 3zyj_A 186 NLRYLNLAMCNLR-EIP-NLTPLIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQSQIQVIERNAFDNLQSLVEINLA 263 (440)
T ss_dssp SCCEEECTTSCCS-SCC-CCTTCSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTSSTTCTTCCEEECT
T ss_pred ccCeecCCCCcCc-ccc-ccCCCcccCEEECCCCccCccChhhhccCccCCEEECCCCceeEEChhhhcCCCCCCEEECC
Confidence 3444444444444 222 24455566666666666665556666666666666666666665556666666666666666
Q ss_pred CCcccccCCccccCCCCCCccccCCCccc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLT 489 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 489 (827)
+|++++..+..+..+++|+.|+|++|.+.
T Consensus 264 ~N~l~~~~~~~~~~l~~L~~L~L~~Np~~ 292 (440)
T 3zyj_A 264 HNNLTLLPHDLFTPLHHLERIHLHHNPWN 292 (440)
T ss_dssp TSCCCCCCTTTTSSCTTCCEEECCSSCEE
T ss_pred CCCCCccChhHhccccCCCEEEcCCCCcc
Confidence 66666555555666666666666666654
No 71
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.94 E-value=5.4e-26 Score=264.69 Aligned_cols=265 Identities=24% Similarity=0.321 Sum_probs=140.6
Q ss_pred cccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEee
Q 047196 196 YLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLG 275 (827)
Q Consensus 196 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 275 (827)
++++|++++|.++ .+|..+. ++|++|++++|.++. +|. .+++|++|+|++|+++ .+|. .+++|++|+|+
T Consensus 41 ~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~~-lp~---~l~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls 109 (622)
T 3g06_A 41 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA---LPPELRTLEVSGNQLT-SLPV---LPPGLLELSIF 109 (622)
T ss_dssp CCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCSC-CCC---CCTTCCEEEECSCCCS-CCCC---CCTTCCEEEEC
T ss_pred CCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCCC-CCC---cCCCCCEEEcCCCcCC-cCCC---CCCCCCEEECc
Confidence 5888888888887 6676655 678888888888773 444 4677777777777776 3554 56777777777
Q ss_pred cccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceee
Q 047196 276 FNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGI 355 (827)
Q Consensus 276 ~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~ 355 (827)
+|++++. |. . +++|+.|++++|++++ +|.. +++|++|++++|++++.
T Consensus 110 ~N~l~~l-~~---~-------------------------l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~Ls~N~l~~l 156 (622)
T 3g06_A 110 SNPLTHL-PA---L-------------------------PSGLCKLWIFGNQLTS-LPVL---PPGLQELSVSDNQLASL 156 (622)
T ss_dssp SCCCCCC-CC---C-------------------------CTTCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSCC
T ss_pred CCcCCCC-CC---C-------------------------CCCcCEEECCCCCCCc-CCCC---CCCCCEEECcCCcCCCc
Confidence 7776653 22 2 2345555555555543 3322 24555555555555431
Q ss_pred cCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEEC
Q 047196 356 IPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYL 435 (827)
Q Consensus 356 ~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 435 (827)
| .. ..+|+.|++++|++++ +| ..+++|+.|++++|++++ +|. .+++|+.|++
T Consensus 157 -~---------------~~----~~~L~~L~L~~N~l~~-l~---~~~~~L~~L~Ls~N~l~~-l~~---~~~~L~~L~L 208 (622)
T 3g06_A 157 -P---------------AL----PSELCKLWAYNNQLTS-LP---MLPSGLQELSVSDNQLAS-LPT---LPSELYKLWA 208 (622)
T ss_dssp -C---------------CC----CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred -C---------------Cc----cCCCCEEECCCCCCCC-Cc---ccCCCCcEEECCCCCCCC-CCC---ccchhhEEEC
Confidence 1 00 0145556666666653 33 234556666666666554 222 1345555555
Q ss_pred CCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCC
Q 047196 436 PFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGP 515 (827)
Q Consensus 436 s~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~ 515 (827)
++|.++ .+|.. +++|+.|++++|++++ +| ..+++|+.|+|++|.|++ +|. .+++|+.|+|++|+++ .
T Consensus 209 ~~N~l~-~l~~~---~~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~ 275 (622)
T 3g06_A 209 YNNRLT-SLPAL---PSGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-R 275 (622)
T ss_dssp CSSCCS-SCCCC---CTTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-S
T ss_pred cCCccc-ccCCC---CCCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-c
Confidence 555555 23322 2445555555555553 33 233445555555555543 222 2334444444444444 3
Q ss_pred CcccccccccCceEEcccceeeeccccccc
Q 047196 516 LSLDIGNLRVVIGINLSRNNFSGDIPSTIG 545 (827)
Q Consensus 516 ~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~ 545 (827)
+|..+.++++|+.|+|++|++++.+|..+.
T Consensus 276 lp~~l~~l~~L~~L~L~~N~l~~~~~~~l~ 305 (622)
T 3g06_A 276 LPESLIHLSSETTVNLEGNPLSERTLQALR 305 (622)
T ss_dssp CCGGGGGSCTTCEEECCSCCCCHHHHHHHH
T ss_pred CCHHHhhccccCEEEecCCCCCCcCHHHHH
Confidence 344444444444444444444444444333
No 72
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=99.94 E-value=1.8e-27 Score=253.18 Aligned_cols=149 Identities=26% Similarity=0.400 Sum_probs=115.9
Q ss_pred cccccceEecCCceEEEEEEec------CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 676 KFSKENLIGVGSFGSVYKGRLH------DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 676 ~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
+++..+.||+|+||+||+|++. +++.||||+++... ....++|.+|++++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3455678999999999999863 46889999996543 2345789999999999999999999999987665443
Q ss_pred --eeeccC------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------
Q 047196 749 --DCLHST------------------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------ 796 (827)
Q Consensus 749 --~~l~~~------------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------ 796 (827)
+++..+ ...++|.++++|+.|||+||+||| +++||||||||+|||
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH---~~~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCccccceEECCCCC
Confidence 332211 124788899999999999999996 567999999999998
Q ss_pred ----eecccccccCCCcc-ccccceecccccccccC
Q 047196 797 ----DFGIGRLLTGDRSM-IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ----DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l 827 (827)
|||+|+.+...... ..+..+||++|||||++
T Consensus 184 ~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l 219 (308)
T 4gt4_A 184 VKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAI 219 (308)
T ss_dssp EEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHH
T ss_pred EEECCcccceeccCCCceeEecccccCCcccCHHHH
Confidence 99999977543322 22345699999999974
No 73
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.94 E-value=3e-27 Score=253.58 Aligned_cols=149 Identities=24% Similarity=0.259 Sum_probs=122.0
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeecc
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHS 753 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~~ 753 (827)
+.|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++.+++..++...+.
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 153 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 153 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCC
Confidence 45888899999999999999864 69999999997654444567899999999999999999999998887655533332
Q ss_pred C---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcccccc
Q 047196 754 T---------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE 814 (827)
Q Consensus 754 ~---------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~~~ 814 (827)
. ...+.+.+...++.|++.||+||| +++||||||||+||| |||+|+.+...... ...
T Consensus 154 ~gg~L~~~l~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~~~ 229 (346)
T 4fih_A 154 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKS 229 (346)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCC-BCC
T ss_pred CCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCc-ccc
Confidence 2 245777888899999999999996 568999999999998 99999987654332 234
Q ss_pred ceecccccccccC
Q 047196 815 TLVTIGYMAPGLL 827 (827)
Q Consensus 815 ~~gt~~Y~APE~l 827 (827)
.+||+.|||||++
T Consensus 230 ~~GTp~YmAPEvl 242 (346)
T 4fih_A 230 LVGTPYWMAPELI 242 (346)
T ss_dssp CCSCGGGCCHHHH
T ss_pred cccCcCcCCHHHH
Confidence 6799999999974
No 74
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=3.6e-26 Score=240.40 Aligned_cols=218 Identities=25% Similarity=0.364 Sum_probs=166.7
Q ss_pred CCCCcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCcc
Q 047196 83 TSVCNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSL 162 (827)
Q Consensus 83 ~~~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~ 162 (827)
.++|.|.|+.|+-. +.++.+++++++++. +|..+. ++|++|+|++|++++..+..|.++++|++|+|++|.++...
T Consensus 2 ~~~C~~~~~~C~c~-~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~ 77 (270)
T 2o6q_A 2 EALCKKDGGVCSCN-NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLP 77 (270)
T ss_dssp CCCBGGGTCSBEEE-TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCC
T ss_pred CccCCCCCCCCEeC-CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeC
Confidence 47999999999643 356789999999985 666554 68999999999999877778999999999999999999766
Q ss_pred ccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCC
Q 047196 163 SSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNL 242 (827)
Q Consensus 163 p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l 242 (827)
+..+.++++|++|++++|.+++ +|...+..+++|++|++++|.+++..|..|+++++|++|++++|.+++..+..+..+
T Consensus 78 ~~~~~~l~~L~~L~l~~n~l~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l 156 (270)
T 2o6q_A 78 AGIFKELKNLETLWVTDNKLQA-LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKL 156 (270)
T ss_dssp TTTTSSCTTCCEEECCSSCCCC-CCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred hhhhcCCCCCCEEECCCCcCCc-CCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCC
Confidence 6667788888888888888874 555555445577888888777777777777777777777777777776666667777
Q ss_pred ccccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCcccc
Q 047196 243 TILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLG 305 (827)
Q Consensus 243 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~ 305 (827)
++|++|+|++|++++..+..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+..
T Consensus 157 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 219 (270)
T 2o6q_A 157 TSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDC 219 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred cccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeC
Confidence 777777777777776666667777777777777777776555556666666666666665543
No 75
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.94 E-value=1.4e-26 Score=243.50 Aligned_cols=146 Identities=27% Similarity=0.387 Sum_probs=113.9
Q ss_pred cccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecC----C--ceee
Q 047196 678 SKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNE----D--FKAL 748 (827)
Q Consensus 678 ~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~----~--~~~l 748 (827)
...++||+|+||+||+|+.. +++.||||++... .....++|.+|++++++++|||||++++++... . +.++
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 45567999999999999865 6899999999643 234567899999999999999999999998542 2 2333
Q ss_pred eeeccC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecccccccCCCc
Q 047196 749 DCLHST--------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRS 809 (827)
Q Consensus 749 ~~l~~~--------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~~~~~~~~ 809 (827)
+++..+ ...+++.....++.||++||+|||. +.++||||||||+||| |||+|+......
T Consensus 109 Ey~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~-~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~- 186 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASF- 186 (290)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT-SSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTS-
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH-CCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCc-
Confidence 444332 2356777888999999999999974 3456999999999998 999998654322
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
....+||++|||||++
T Consensus 187 --~~~~~GTp~YmAPE~~ 202 (290)
T 3fpq_A 187 --AKAVIGTPEFMAPEMY 202 (290)
T ss_dssp --BEESCSSCCCCCGGGG
T ss_pred --cCCcccCccccCHHHc
Confidence 2345699999999974
No 76
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.94 E-value=6.4e-27 Score=249.50 Aligned_cols=151 Identities=27% Similarity=0.406 Sum_probs=114.6
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC------ceee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED------FKAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~------~~~l 748 (827)
++|...+.||+|+||+||+|++ +|+.||||++..... ....+++|+..+.+++|||||+++|+|.+++ +.++
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~-~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSREE-RSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGGH-HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred cEEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccch-hhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 3566778999999999999998 489999999965432 2233456777778899999999999998654 2334
Q ss_pred eeeccC-------CCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEccCCCccee----------eecccccccC
Q 047196 749 DCLHST-------NCSLNIFDKLNIMIDVASALEYLHFS-----HSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 749 ~~l~~~-------~~~l~~~~~~~i~~~ia~~L~~Lh~~-----h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
+++..+ ...++|.++.+++.++|+||+|||.. |.++||||||||+||| |||+|+....
T Consensus 81 Ey~~~gsL~~~l~~~~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~ 160 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDS 160 (303)
T ss_dssp ECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEET
T ss_pred cCCCCCcHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccC
Confidence 444322 23578889999999999999999954 5779999999999999 9999998755
Q ss_pred CCccc---cccceecccccccccC
Q 047196 807 DRSMI---QTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~---~~~~~gt~~Y~APE~l 827 (827)
..... ....+||++|||||++
T Consensus 161 ~~~~~~~~~~~~~GT~~ymAPE~l 184 (303)
T 3hmm_A 161 ATDTIDIAPNHRVGTKRYMAPEVL 184 (303)
T ss_dssp TTTEESCC-----CCGGGCCHHHH
T ss_pred CCCceeeecccccccccccCHHHh
Confidence 43321 1234699999999974
No 77
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=99.94 E-value=8.4e-27 Score=246.37 Aligned_cols=150 Identities=28% Similarity=0.392 Sum_probs=121.3
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|+..++||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|+++|++++|||||++++++.+++..++..
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5799999999999999999986 469999999997532 223567999999999999999999999998887655433
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+.. ...++..+...++.|++.||+||| +++|+||||||+||| |||+|+.+......
T Consensus 112 Ey~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~ 188 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ 188 (311)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC
T ss_pred ecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc
Confidence 3322 235677777889999999999996 578999999999999 99999987544332
Q ss_pred -ccccceecccccccccC
Q 047196 811 -IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 -~~~~~~gt~~Y~APE~l 827 (827)
...+.+||+.|||||++
T Consensus 189 ~~~~~~~GTp~YmAPEvl 206 (311)
T 4aw0_A 189 ARANSFVGTAQYVSPELL 206 (311)
T ss_dssp CCBCCCCSCGGGCCHHHH
T ss_pred ccccCcccCcccCCHHHH
Confidence 22345799999999974
No 78
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.93 E-value=1.5e-26 Score=254.38 Aligned_cols=149 Identities=24% Similarity=0.259 Sum_probs=122.3
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeecc
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHS 753 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~~ 753 (827)
+.|+..+.||+|+||+||+|+.. +|+.||||++........+.+.+|+++|++++|||||++++++..++..++...+.
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~ 230 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFL 230 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCC
Confidence 46888899999999999999864 69999999997654444567899999999999999999999998887655533332
Q ss_pred C---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcccccc
Q 047196 754 T---------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQTE 814 (827)
Q Consensus 754 ~---------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~~~ 814 (827)
. ...+.+.+...|+.|+++||+||| +++||||||||+||| |||+|+.+...... ...
T Consensus 231 ~gG~L~~~i~~~~l~e~~~~~~~~qil~aL~ylH---~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~-~~~ 306 (423)
T 4fie_A 231 EGGALTDIVTHTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPR-RKS 306 (423)
T ss_dssp TTEEHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCC-BCC
T ss_pred CCCcHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCcc-ccc
Confidence 2 234677788899999999999996 568999999999998 99999987554332 244
Q ss_pred ceecccccccccC
Q 047196 815 TLVTIGYMAPGLL 827 (827)
Q Consensus 815 ~~gt~~Y~APE~l 827 (827)
.+||+.|||||++
T Consensus 307 ~~GTp~YmAPEvl 319 (423)
T 4fie_A 307 LVGTPYWMAPELI 319 (423)
T ss_dssp CEECTTTCCHHHH
T ss_pred cccCcCcCCHHHH
Confidence 6799999999974
No 79
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.93 E-value=2.5e-29 Score=295.50 Aligned_cols=426 Identities=12% Similarity=0.083 Sum_probs=226.6
Q ss_pred CCcccceecCCCCCcEEEEEcCCCCCccccC-ccccCCCCCCEEECCCCCCCc---cCC------------hhhhhcccc
Q 047196 85 VCNWIGITCNVNSHRVTALNISSLNLQGTIP-PQLGNLSSLTTLNLSHNKLSG---DIP------------PSIFTMHKL 148 (827)
Q Consensus 85 ~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~-~~l~~L~~L~~L~Ls~N~l~g---~~p------------~~~~~l~~L 148 (827)
|++|.++... ..+.++++... +..+ ..+..+++|++|+|+++.... ..| .....+++|
T Consensus 34 ck~W~~~~~~----~~~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L 107 (594)
T 2p1m_B 34 CKSWYEIERW----CRRKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWL 107 (594)
T ss_dssp CHHHHHHHHH----HCCEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTC
T ss_pred HHHHHHhhhh----hceEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCC
Confidence 5578887322 23345554432 2222 236677889999999875321 122 123467889
Q ss_pred ceEEecCCCCCCccccccC-CCCCCcEEEcCCC-CCCCCcchhHhhccccccEEEeecccccccCCccC----CCCCCCc
Q 047196 149 KFLDFSDNQLSGSLSSVTF-NLSSVLDIRLDSD-KLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLAL----SKCKRLQ 222 (827)
Q Consensus 149 ~~LdLs~N~l~g~~p~~~~-~l~~L~~L~L~~n-~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l----~~l~~L~ 222 (827)
++|+|++|.+++..+..+. .+++|++|+|++| .++......+...+++|++|+|++|.+++..+..+ ..+++|+
T Consensus 108 ~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~ 187 (594)
T 2p1m_B 108 EEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLV 187 (594)
T ss_dssp CEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCC
T ss_pred CeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCc
Confidence 9999999988877666654 5778888888877 44432233344345688888888888776544333 3667888
Q ss_pred EEEccCCC--Cccc-CCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecc-------cCcccCchhhhcCCC
Q 047196 223 LLNLGFKK--LSGA-IPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFN-------NLVGVVPAAIFNMST 292 (827)
Q Consensus 223 ~L~L~~n~--l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N-------~l~~~~p~~~~~l~~ 292 (827)
.|++++|. ++.. ++..+.++++|++|++++|...+.+|..+..+++|++|+++.+ .+.+ ++..+.++++
T Consensus 188 ~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~-l~~~l~~~~~ 266 (594)
T 2p1m_B 188 SLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTAEVRPDVYSG-LSVALSGCKE 266 (594)
T ss_dssp EEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCCCCCHHHHHH-HHHHHHTCTT
T ss_pred EEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccCccchhhHHH-HHHHHhcCCC
Confidence 88888876 2211 1112234678888888887332337777778888888885443 3443 3346677777
Q ss_pred ccEEE-ecCCccccccChhhhcCCCCccEEeCcCCcccccc-CccccCCCCCcEEEcCCCcceeecCCCccCCCCCCccc
Q 047196 293 VKKIY-LLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTI-PSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGV 370 (827)
Q Consensus 293 L~~L~-l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~ 370 (827)
|+.+. +.+.. .+.++.... .+++|+.|++++|.+++.. +..+..+++|+.|++++| ++.. .
T Consensus 267 L~~Ls~~~~~~-~~~l~~~~~-~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~--------------~ 329 (594)
T 2p1m_B 267 LRCLSGFWDAV-PAYLPAVYS-VCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDA--------------G 329 (594)
T ss_dssp CCEEECCBTCC-GGGGGGGHH-HHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHH--------------H
T ss_pred cccccCCcccc-hhhHHHHHH-hhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHH--------------H
Confidence 77773 22221 122332221 4567777777777765432 222456677777777665 2210 0
Q ss_pred CCCchhcccccccEEEccC---------CcCccccCccc-cCCCCCceEeccCcccccccccccc-CCCCCcEEECC--C
Q 047196 371 LPTSIGNLSMSLENIYISN---------CNIGGSIPQLI-SNLSNLLLLDLEGNKLTGSIPVTFG-RLQKLQGLYLP--F 437 (827)
Q Consensus 371 ~p~~~~~~~~~L~~L~Ls~---------N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls--~ 437 (827)
++.....++ +|++|++++ +.+++.....+ ..+++|+.|+++.|.+++..+..+. .+++|+.|+++ +
T Consensus 330 l~~l~~~~~-~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~ 408 (594)
T 2p1m_B 330 LEVLASTCK-DLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIE 408 (594)
T ss_dssp HHHHHHHCT-TCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESS
T ss_pred HHHHHHhCC-CCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeeccc
Confidence 001111122 566666632 34433222222 2356666666666666554444443 35666666665 2
Q ss_pred ----CCCCCCC-----CccccccccccEEecCCCcccccCCccccC-CCCCCccccCCCcccccCCccccccccccccCC
Q 047196 438 ----NKLAGSI-----PDQLCHLARLNTLGLAGNKFSGSIPSCLGN-LTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDL 507 (827)
Q Consensus 438 ----N~l~g~~-----p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~-l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL 507 (827)
|.+++.. +..+..+++|+.|++++ .+++..+..+.. +++|++|+|++|.
T Consensus 409 ~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~-------------------- 467 (594)
T 2p1m_B 409 PKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAG-------------------- 467 (594)
T ss_dssp TTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCC--------------------
T ss_pred CCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCC--------------------
Confidence 3333111 11133344555555544 333333333322 4445555555444
Q ss_pred CCCCCCCCCcccc-cccccCceEEcccceeeecccc-cccCCCCCCEEECCCCcc
Q 047196 508 SSNSLDGPLSLDI-GNLRVVIGINLSRNNFSGDIPS-TIGDLKDLQNISLACNGL 560 (827)
Q Consensus 508 s~N~l~g~~p~~~-~~l~~L~~L~Ls~N~l~g~ip~-~~~~l~~L~~L~Ls~N~l 560 (827)
+++..+..+ ..+++|+.|++++|.+++..+. .+..+++|+.|++++|++
T Consensus 468 ----i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~ 518 (594)
T 2p1m_B 468 ----DSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCSV 518 (594)
T ss_dssp ----SSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSCC
T ss_pred ----CcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCC
Confidence 443322222 3345555555555555433332 223355555555555555
No 80
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=99.93 E-value=5.7e-27 Score=251.86 Aligned_cols=149 Identities=26% Similarity=0.399 Sum_probs=113.5
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--e
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--D 749 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~ 749 (827)
++|+..+.||+|+||+||+|+. .+|+.||||++... .....++|.+|++++++++|||||++++++.+++..++ +
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 6789999999999999999986 46999999999654 23456789999999999999999999999988775554 3
Q ss_pred eeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 750 CLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 750 ~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
++..+ ...+++.+...|+.||+.||+||| +++||||||||+||| |||+|+.+.....
T Consensus 104 y~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~ 180 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH---DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180 (350)
T ss_dssp CCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH
T ss_pred CCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc
Confidence 33221 123456677889999999999996 578999999999998 9999987643222
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
. .+..+||+.|||||++
T Consensus 181 ~-~~~~~GT~~YmAPE~l 197 (350)
T 4b9d_A 181 L-ARACIGTPYYLSPEIC 197 (350)
T ss_dssp H-HHHHHSCCTTCCHHHH
T ss_pred c-ccccCCCccccCHHHH
Confidence 1 2335699999999974
No 81
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.93 E-value=1.5e-26 Score=241.17 Aligned_cols=148 Identities=23% Similarity=0.371 Sum_probs=107.5
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++.+++..++..
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 5799999999999999999986 469999999997542 223467999999999999999999999998877655432
Q ss_pred eccC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 751 LHST---------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 751 l~~~---------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
.+.+ ...++..+...++.|++.||+||| +++|+||||||+||| |||+|+.......
T Consensus 93 Ey~~g~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH---~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~-- 167 (275)
T 3hyh_A 93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-- 167 (275)
T ss_dssp ECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTCCEEECCSSCC----------
T ss_pred eCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCc--
Confidence 2221 245777788899999999999996 578999999999998 9999987654332
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
....+||+.|||||++
T Consensus 168 ~~~~~GT~~Y~APE~~ 183 (275)
T 3hyh_A 168 LKTSCGSPNYAAPEVI 183 (275)
T ss_dssp -------CTTSCHHHH
T ss_pred cCCeeECcccCChhhh
Confidence 2345799999999974
No 82
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=7e-27 Score=266.65 Aligned_cols=30 Identities=17% Similarity=0.086 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhcCCCCceEEEeeeecCC
Q 047196 715 LKSFEAECEVMKNIRHRNHVKRISSCSNED 744 (827)
Q Consensus 715 ~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~ 744 (827)
.++|.+|++.+++++|+|+|+++|||....
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 356999999999999999999999997754
No 83
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.93 E-value=1.7e-26 Score=263.41 Aligned_cols=124 Identities=20% Similarity=0.115 Sum_probs=72.2
Q ss_pred cccEEEccCCcCccccCcccc-CCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEec
Q 047196 381 SLENIYISNCNIGGSIPQLIS-NLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGL 459 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 459 (827)
+|+.|+|++|.+++.+|..+. .+++|+.|+|++|.+++..+ +..+++|+.|+|++|.+++ +|..+..+++|+.|+|
T Consensus 145 ~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~--~~~l~~L~~L~Ls~N~l~~-~~~~~~~l~~L~~L~L 221 (487)
T 3oja_A 145 RVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKG--QVVFAKLKTLDLSSNKLAF-MGPEFQSAAGVTWISL 221 (487)
T ss_dssp SEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEEC--CCCCTTCCEEECCSSCCCE-ECGGGGGGTTCSEEEC
T ss_pred CCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccc--cccCCCCCEEECCCCCCCC-CCHhHcCCCCccEEEe
Confidence 444445555555544444443 45666666666666665422 2246666666666666664 3334666666666666
Q ss_pred CCCcccccCCccccCCCCCCccccCCCccc-ccCCccccccccccccCCC
Q 047196 460 AGNKFSGSIPSCLGNLTSLRSPDLGSNRLT-SVLPSTFWNLKDILFFDLS 508 (827)
Q Consensus 460 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~-~~~p~~~~~l~~L~~LdLs 508 (827)
++|++++ +|..+..+++|+.|++++|.+. +.+|.++..++.|+.++++
T Consensus 222 s~N~l~~-lp~~l~~l~~L~~L~l~~N~l~c~~~~~~~~~l~~L~~l~~~ 270 (487)
T 3oja_A 222 RNNKLVL-IEKALRFSQNLEHFDLRGNGFHCGTLRDFFSKNQRVQTVAKQ 270 (487)
T ss_dssp TTSCCCE-ECTTCCCCTTCCEEECTTCCBCHHHHHHHHTTCHHHHHHHHH
T ss_pred cCCcCcc-cchhhccCCCCCEEEcCCCCCcCcchHHHHHhCCCCcEEecc
Confidence 6666664 5656666666666666666665 4555556666666655553
No 84
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.93 E-value=2.1e-26 Score=244.30 Aligned_cols=150 Identities=26% Similarity=0.424 Sum_probs=106.5
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC--------
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNED-------- 744 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-------- 744 (827)
++|+..+.||+|+||+||+|+.+ +|+.||||+++... ....+++.+|+++|++++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 56889999999999999999864 68999999996543 344578999999999999999999999986543
Q ss_pred ------ceeeeeeccCC-----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------e
Q 047196 745 ------FKALDCLHSTN-----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------D 797 (827)
Q Consensus 745 ------~~~l~~l~~~~-----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------D 797 (827)
+..++++..+. ....+.....|+.|+++||+||| +++||||||||+||| |
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH---~~~IiHRDlKp~NILl~~~~~vKl~D 161 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGD 161 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHH---HCcCccccCcHHHeEECCCCcEEEcc
Confidence 22333332211 11234446789999999999996 568999999999998 9
Q ss_pred ecccccccCCCcc-----------ccccceecccccccccC
Q 047196 798 FGIGRLLTGDRSM-----------IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 798 FGla~~~~~~~~~-----------~~~~~~gt~~Y~APE~l 827 (827)
||+|+.+..+... ..+..+||+.|||||++
T Consensus 162 FGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~ 202 (299)
T 4g31_A 162 FGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQI 202 (299)
T ss_dssp CCCC--------------------------CCCTTSCHHHH
T ss_pred CccceecCCCccccccccccccccccCCcccCccccCHHHH
Confidence 9999987543221 11234699999999974
No 85
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.92 E-value=7.2e-26 Score=242.19 Aligned_cols=145 Identities=23% Similarity=0.256 Sum_probs=113.6
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--eee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--DCL 751 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~~l 751 (827)
+.|...++||+|+||+||+|+.+ +|+.||||+++.... ..+|++++++++|||||++++++.+++..++ +++
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~ 132 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELL 132 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEecc
Confidence 56777889999999999999864 699999999975422 2479999999999999999999988776544 443
Q ss_pred ccC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecccccccCCCcc--
Q 047196 752 HST--------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSM-- 810 (827)
Q Consensus 752 ~~~--------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~~~~~~~~~-- 810 (827)
... ...+++.+...++.|++.||+||| +++||||||||+||| |||+|+.+..+...
T Consensus 133 ~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~ 209 (336)
T 4g3f_A 133 EGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKS 209 (336)
T ss_dssp TTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC--------
T ss_pred CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccc
Confidence 321 235778888899999999999995 678999999999998 99999987543321
Q ss_pred --ccccceecccccccccC
Q 047196 811 --IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 --~~~~~~gt~~Y~APE~l 827 (827)
.....+||+.|||||++
T Consensus 210 ~~~~~~~~GT~~YmAPE~~ 228 (336)
T 4g3f_A 210 LLTGDYIPGTETHMAPEVV 228 (336)
T ss_dssp ----CCCCCCGGGCCHHHH
T ss_pred eecCCccccCccccCHHHH
Confidence 11224699999999974
No 86
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=99.92 E-value=1e-27 Score=281.70 Aligned_cols=418 Identities=13% Similarity=0.114 Sum_probs=251.9
Q ss_pred CEEECCCCCCCccCC-hhhhhccccceEEecCCCCCCcc---c------------cccCCCCCCcEEEcCCCCCCCCcch
Q 047196 125 TTLNLSHNKLSGDIP-PSIFTMHKLKFLDFSDNQLSGSL---S------------SVTFNLSSVLDIRLDSDKLSGELPV 188 (827)
Q Consensus 125 ~~L~Ls~N~l~g~~p-~~~~~l~~L~~LdLs~N~l~g~~---p------------~~~~~l~~L~~L~L~~n~l~g~ip~ 188 (827)
+.+++++.. ...| ..+..+++|++|+|+++.....+ | .....+++|++|+|++|.+++..+.
T Consensus 46 ~~l~~~~~~--~~~~~~~~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~~~~ 123 (594)
T 2p1m_B 46 RKVFIGNCY--AVSPATVIRRFPKVRSVELKGKPHFADFNLVPDGWGGYVYPWIEAMSSSYTWLEEIRLKRMVVTDDCLE 123 (594)
T ss_dssp CEEEESSTT--SSCHHHHHHHCTTCCEEEEECSCGGGGGTCSCTTSCCBCHHHHHHHHHHCTTCCEEEEESCBCCHHHHH
T ss_pred eEEeecccc--ccCHHHHHhhCCCceEEeccCCCchhhcccccccccchhhHHHHHHHHhCCCCCeEEeeCcEEcHHHHH
Confidence 355665433 2333 34678999999999998643211 1 1123455666666666666655555
Q ss_pred hHhhccccccEEEeecc-ccccc-CCccCCCCCCCcEEEccCCCCcccCCCcCc----CCccccEEEccccc--ccc-cc
Q 047196 189 NICNYLHYLKVLFLAKN-MFHGQ-IPLALSKCKRLQLLNLGFKKLSGAIPKEIS----NLTILRKISLRNNK--LRG-EI 259 (827)
Q Consensus 189 ~~~~~~~~L~~L~Ls~N-~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~----~l~~L~~L~Ls~N~--l~~-~~ 259 (827)
.+...+++|++|+|++| .++.. ++..+.++++|++|++++|.+++..+..+. .+++|++|++++|. ++. .+
T Consensus 124 ~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~~L~~L~l~~~~~~~~~~~l 203 (594)
T 2p1m_B 124 LIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYTSLVSLNISCLASEVSFSAL 203 (594)
T ss_dssp HHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCCCCCEEECTTCCSCCCHHHH
T ss_pred HHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCCcCcEEEecccCCcCCHHHH
Confidence 55433446666666666 33322 333333556666666666665543332222 44456666666554 211 11
Q ss_pred cccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCC
Q 047196 260 PHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNA 339 (827)
Q Consensus 260 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 339 (827)
+..+..+++|++|+|++|...+.+|..+.++++|+.|++..+.. ++..|.+.+ ++..+.++
T Consensus 204 ~~l~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~l~~~~~------------------~~~~~~~~~-l~~~l~~~ 264 (594)
T 2p1m_B 204 ERLVTRCPNLKSLKLNRAVPLEKLATLLQRAPQLEELGTGGYTA------------------EVRPDVYSG-LSVALSGC 264 (594)
T ss_dssp HHHHHHCTTCCEEECCTTSCHHHHHHHHHHCTTCSEEECSBCCC------------------CCCHHHHHH-HHHHHHTC
T ss_pred HHHHHhCCCCcEEecCCCCcHHHHHHHHhcCCcceEcccccccC------------------ccchhhHHH-HHHHHhcC
Confidence 11123345566666655522222444455555555554433221 022333443 33456777
Q ss_pred CCCcEE-EcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCcccc-CccccCCCCCceEeccCcccc
Q 047196 340 SKLVYL-DMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSI-PQLISNLSNLLLLDLEGNKLT 417 (827)
Q Consensus 340 ~~L~~L-~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~ 417 (827)
++|+.| .+.+... +.+|..+..++ +|++|++++|.+++.. +..+..+++|+.|++++| +.
T Consensus 265 ~~L~~Ls~~~~~~~----------------~~l~~~~~~~~-~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~ 326 (594)
T 2p1m_B 265 KELRCLSGFWDAVP----------------AYLPAVYSVCS-RLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IE 326 (594)
T ss_dssp TTCCEEECCBTCCG----------------GGGGGGHHHHT-TCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GH
T ss_pred CCcccccCCcccch----------------hhHHHHHHhhC-CCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cC
Confidence 777777 2222111 12233333344 7888888888876543 334567888889988888 43
Q ss_pred c-cccccccCCCCCcEEECC---------CCCCCCCCCcccc-ccccccEEecCCCcccccCCcccc-CCCCCCccccC-
Q 047196 418 G-SIPVTFGRLQKLQGLYLP---------FNKLAGSIPDQLC-HLARLNTLGLAGNKFSGSIPSCLG-NLTSLRSPDLG- 484 (827)
Q Consensus 418 g-~~p~~~~~l~~L~~L~Ls---------~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~~~~p~~~~-~l~~L~~L~Ls- 484 (827)
. .++.....+++|+.|+++ .+.+++.....+. .+++|+.|+++.|++++..+..+. .+++|+.|+++
T Consensus 327 ~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~ 406 (594)
T 2p1m_B 327 DAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVSVSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCI 406 (594)
T ss_dssp HHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHHHHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEE
T ss_pred HHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHHHHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeec
Confidence 2 233333457888888883 3455433222232 478899998888888876655554 58899999998
Q ss_pred -C----Cccccc-----CCccccccccccccCCCCCCCCCCCcccccc-cccCceEEcccceeeecccccc-cCCCCCCE
Q 047196 485 -S----NRLTSV-----LPSTFWNLKDILFFDLSSNSLDGPLSLDIGN-LRVVIGINLSRNNFSGDIPSTI-GDLKDLQN 552 (827)
Q Consensus 485 -~----N~l~~~-----~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~-l~~L~~L~Ls~N~l~g~ip~~~-~~l~~L~~ 552 (827)
+ |.++.. ++..+..+++|+.|+|++ .+++..+..++. +++|+.|++++|.+++..+..+ ..+++|+.
T Consensus 407 ~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~ 485 (594)
T 2p1m_B 407 IEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRK 485 (594)
T ss_dssp SSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCE
T ss_pred ccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCE
Confidence 4 556532 222366788999999987 777666666665 8899999999999988766666 67999999
Q ss_pred EECCCCcceeecCC----CCcCCceEeCcCCcCe
Q 047196 553 ISLACNGLEGLIPE----SFGYLTELNLSFNKLE 582 (827)
Q Consensus 553 L~Ls~N~l~g~ip~----~~~~L~~L~ls~N~l~ 582 (827)
|+|++|.+++..+. .+.+|+.|++++|+++
T Consensus 486 L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~~~ 519 (594)
T 2p1m_B 486 LEIRDCPFGDKALLANASKLETMRSLWMSSCSVS 519 (594)
T ss_dssp EEEESCSCCHHHHHHTGGGGGGSSEEEEESSCCB
T ss_pred EECcCCCCcHHHHHHHHHhCCCCCEEeeeCCCCC
Confidence 99999999654432 3568999999999885
No 87
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.92 E-value=4.1e-26 Score=241.12 Aligned_cols=149 Identities=25% Similarity=0.287 Sum_probs=110.8
Q ss_pred hcccccceEecCCceEEEEEEec----CCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH----DGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
++|+..+.||+|+||+||+|+.. +++.||||+++... .....++.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 57999999999999999999752 47899999996532 1223468899999999999999999999988776554
Q ss_pred eeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 DCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 ~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
...+.. ...++..+...++.|++.||+||| +++|+||||||+||| |||+|+......
T Consensus 104 vmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH---~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~ 180 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH---SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE 180 (304)
T ss_dssp EECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----
T ss_pred EEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC
Confidence 333322 235677778889999999999996 578999999999998 999998764433
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
.. ....+||+.|||||++
T Consensus 181 ~~-~~~~~GT~~YmAPE~~ 198 (304)
T 3ubd_A 181 KK-AYSFCGTVEYMAPEVV 198 (304)
T ss_dssp CC-CCSCCCCGGGCCHHHH
T ss_pred cc-ccccccCcccCCHHHh
Confidence 22 2345699999999974
No 88
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.92 E-value=4.2e-25 Score=239.15 Aligned_cols=152 Identities=22% Similarity=0.409 Sum_probs=119.1
Q ss_pred HhhcccccceEecCCceEEEEEEecC------CcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCC-CCceEEEeeeecCC
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLHD------GIEVAIKVFHQNC-AMALKSFEAECEVMKNIRH-RNHVKRISSCSNED 744 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H-~niv~~~~~~~~~~ 744 (827)
..++|+..+.||+|+||+||+|++.. ++.||||++.... ....++|.+|+++|++++| ||||+++|+|.+++
T Consensus 62 ~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~ 141 (353)
T 4ase_A 62 PRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPG 141 (353)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTT
T ss_pred cHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecC
Confidence 44678888999999999999998642 3689999997643 3445789999999999976 89999999997643
Q ss_pred ---ceeeeeeccC------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-
Q 047196 745 ---FKALDCLHST------------------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF- 796 (827)
Q Consensus 745 ---~~~l~~l~~~------------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl- 796 (827)
+.+++++..+ ...+++.++..++.|||+||+||| +++||||||||+|||
T Consensus 142 ~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH---~~~iiHRDLK~~NILl 218 (353)
T 4ase_A 142 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILL 218 (353)
T ss_dssp SCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred CEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHh---hCCeecCccCccceee
Confidence 2334443221 123788889999999999999996 567999999999999
Q ss_pred ---------eecccccccCCCccc-cccceecccccccccC
Q 047196 797 ---------DFGIGRLLTGDRSMI-QTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ---------DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l 827 (827)
|||+|+.+..+.... .+..+||++|||||++
T Consensus 219 ~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l 259 (353)
T 4ase_A 219 SEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 259 (353)
T ss_dssp CGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH
T ss_pred CCCCCEEECcchhhhhcccCCCceeeccccccccccCHHHH
Confidence 999999875544332 2345699999999974
No 89
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.9e-24 Score=228.01 Aligned_cols=206 Identities=22% Similarity=0.262 Sum_probs=161.6
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
++++|++++|++++..+..|.++++|++|++++|++++..+..|.++++|++|+|++|++++..|..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 67888888888887777777888888888888888887777778888888888888888887777778888888888888
Q ss_pred CCcccccCCccccCCCCCCccccCCCccccc-CCccccccccccccCCCCCCCCCCCcccccccccCc----eEEcccce
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSV-LPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVI----GINLSRNN 535 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~----~L~Ls~N~ 535 (827)
+|++++..+..+..+++|++|++++|.+++. +|..+..+++|+.|++++|++++..+..+..+..|+ .|++++|+
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~ 188 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSC
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCc
Confidence 8888876666788888888888888888764 577888888888888888888877777777777766 78888888
Q ss_pred eeecccccccCCCCCCEEECCCCcceeecCCCC---cCCceEeCcCCcCeecCCC
Q 047196 536 FSGDIPSTIGDLKDLQNISLACNGLEGLIPESF---GYLTELNLSFNKLEGEIPR 587 (827)
Q Consensus 536 l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~---~~L~~L~ls~N~l~g~ip~ 587 (827)
+++..+..+.. .+|+.|+|++|++++..+..+ .+|+.|++++|++++..|.
T Consensus 189 l~~~~~~~~~~-~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 242 (276)
T 2z62_A 189 MNFIQPGAFKE-IRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 242 (276)
T ss_dssp CCEECTTSSCS-CCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTTT
T ss_pred ccccCccccCC-CcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCCc
Confidence 88665555544 478888888888887766544 4788888888888876654
No 90
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.91 E-value=5.6e-24 Score=224.43 Aligned_cols=184 Identities=26% Similarity=0.272 Sum_probs=138.9
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|++|++++|++++..+..|..+++|++|++++|++++..+..|.++++|++|++++|.+.+..+..+.++++|++|+++
T Consensus 53 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 132 (276)
T 2z62_A 53 ELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVA 132 (276)
T ss_dssp TCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECC
T ss_pred CCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEECc
Confidence 56666666666666566667777777777777777777766777777777777777777776666667777778888888
Q ss_pred CCccccc-CCccccCCCCCCccccCCCcccccCCcccccccccc----ccCCCCCCCCCCCcccccccccCceEEcccce
Q 047196 461 GNKFSGS-IPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDIL----FFDLSSNSLDGPLSLDIGNLRVVIGINLSRNN 535 (827)
Q Consensus 461 ~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~----~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 535 (827)
+|++++. +|..+..+++|++|++++|.+++..+..+..+.+|+ .|++++|.+++..+..+.. ..|+.|++++|+
T Consensus 133 ~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~-~~L~~L~L~~n~ 211 (276)
T 2z62_A 133 HNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKE-IRLKELALDTNQ 211 (276)
T ss_dssp SSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCS-CCEEEEECCSSC
T ss_pred CCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCC-CcccEEECCCCc
Confidence 8877753 577777888888888888888777777777776666 7788888888655544443 478889999999
Q ss_pred eeecccccccCCCCCCEEECCCCcceeecC
Q 047196 536 FSGDIPSTIGDLKDLQNISLACNGLEGLIP 565 (827)
Q Consensus 536 l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip 565 (827)
+++..+..+..+++|+.|++++|.+++..|
T Consensus 212 l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 212 LKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp CSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred eeecCHhHhcccccccEEEccCCcccccCC
Confidence 887777778889999999999999987655
No 91
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.91 E-value=1.1e-24 Score=240.16 Aligned_cols=150 Identities=29% Similarity=0.440 Sum_probs=117.3
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecC------C-
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNE------D- 744 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~------~- 744 (827)
++|+..+.||+|+||+||+|+. .+|+.||||++... .....+++.+|+++|++++|||||++++++... .
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 5689999999999999999986 47999999999653 234456789999999999999999999987542 1
Q ss_pred -ceeeeeecc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 745 -FKALDCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 745 -~~~l~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
+.+++++.. ....+++.+...++.|++.||+||| +++||||||||+||| |||+|+.+..
T Consensus 134 ~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH---~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~ 210 (398)
T 4b99_A 134 VYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCT 210 (398)
T ss_dssp EEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC--
T ss_pred EEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCcCcCCCcCccccccCCCCCEEEeecceeeeccc
Confidence 234444422 2346788888899999999999996 578999999999998 9999987643
Q ss_pred CCc---cccccceecccccccccC
Q 047196 807 DRS---MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~---~~~~~~~gt~~Y~APE~l 827 (827)
... ...+..+||+.|||||++
T Consensus 211 ~~~~~~~~~~~~~GT~~Y~APEv~ 234 (398)
T 4b99_A 211 SPAEHQYFMTEYVATRWYRAPELM 234 (398)
T ss_dssp -----CCCCCSSCCCCTTCCHHHH
T ss_pred CccccccccccceeChHhcCHHHh
Confidence 321 122345799999999973
No 92
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=3.6e-24 Score=225.27 Aligned_cols=200 Identities=27% Similarity=0.274 Sum_probs=166.0
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|+.|++++|.++. + ..+..+++|++|++++|++++. ..+..+++|++|++++|.+++..+..+.++++|++|+++
T Consensus 42 ~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 117 (272)
T 3rfs_A 42 SIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLV 117 (272)
T ss_dssp TCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred ceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECC
Confidence 57777777777663 2 2467788888888888888763 367788888888888888887777778888888888888
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++..|..+..+++|++|++++|.+++..|..+..+++|+.|++++|++++..+..++.+++|+.|++++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (272)
T 3rfs_A 118 ENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVP 197 (272)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccC
Confidence 88888777777888888888888888888877777888888889999999888877777888899999999999999888
Q ss_pred cccccCCCCCCEEECCCCcceeecCCCCcCCceEeCcCCcCeecCCCC
Q 047196 541 PSTIGDLKDLQNISLACNGLEGLIPESFGYLTELNLSFNKLEGEIPRG 588 (827)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~L~~L~ls~N~l~g~ip~~ 588 (827)
|..++.+++|+.|++++|.+.+..| .|+.++++.|+++|.+|..
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~~~~~----~l~~l~~~~n~~~g~ip~~ 241 (272)
T 3rfs_A 198 DGVFDRLTSLQYIWLHDNPWDCTCP----GIRYLSEWINKHSGVVRNS 241 (272)
T ss_dssp TTTTTTCTTCCEEECCSSCBCCCTT----TTHHHHHHHHHTGGGBBCT
T ss_pred HHHHhCCcCCCEEEccCCCccccCc----HHHHHHHHHHhCCCcccCc
Confidence 8888999999999999999888766 5788999999999999974
No 93
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=8e-24 Score=219.88 Aligned_cols=192 Identities=21% Similarity=0.287 Sum_probs=138.9
Q ss_pred CCCcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccc
Q 047196 84 SVCNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLS 163 (827)
Q Consensus 84 ~~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p 163 (827)
+||.|.|++|.. ..+.+++++++++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|.+++..+
T Consensus 3 ~Cp~~~gC~C~~---~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~ 76 (251)
T 3m19_A 3 TCETVTGCTCNE---GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSA 76 (251)
T ss_dssp -CHHHHSSEEEG---GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCT
T ss_pred cCCCCCceEcCC---CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCH
Confidence 688999999963 3456899999998 4566555 689999999999999888899999999999999999998887
Q ss_pred cccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCc
Q 047196 164 SVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLT 243 (827)
Q Consensus 164 ~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~ 243 (827)
..+.++++|++|+|++|.+++ +|...+..+++|++|+|++|.+++..+..|.++++|++|+|++|++++..+..|++++
T Consensus 77 ~~~~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~ 155 (251)
T 3m19_A 77 GVFDDLTELGTLGLANNQLAS-LPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLT 155 (251)
T ss_dssp TTTTTCTTCCEEECTTSCCCC-CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCT
T ss_pred hHhccCCcCCEEECCCCcccc-cChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCc
Confidence 778888888888877777773 4444444445666666666666655555566666666666666666655555566666
Q ss_pred cccEEEcccccccccccccccCcCCCcEEEeecccCccc
Q 047196 244 ILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGV 282 (827)
Q Consensus 244 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 282 (827)
+|++|+|++|++++..+..+..+++|++|+|++|.+++.
T Consensus 156 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 156 NLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred CCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 666666666666655555566666666666666666544
No 94
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.91 E-value=4.5e-24 Score=224.59 Aligned_cols=210 Identities=22% Similarity=0.298 Sum_probs=136.4
Q ss_pred ccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccc
Q 047196 118 LGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYL 197 (827)
Q Consensus 118 l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L 197 (827)
+..+++|+.|++++|.++. + +.+..+++|++|+|++|.+++. ..+..+++|++|++++|.+++ +|...+..+++|
T Consensus 37 ~~~l~~L~~L~l~~~~i~~-~-~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~-~~~~~~~~l~~L 111 (272)
T 3rfs_A 37 QNELNSIDQIIANNSDIKS-V-QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQS-LPNGVFDKLTNL 111 (272)
T ss_dssp HHHHTTCCEEECTTSCCCC-C-TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCC-CCTTTTTTCTTC
T ss_pred cccccceeeeeeCCCCccc-c-cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCc-cChhHhcCCcCC
Confidence 4455566666666666552 2 2355666666666666666542 245555555555555555553 333333334467
Q ss_pred cEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecc
Q 047196 198 KVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFN 277 (827)
Q Consensus 198 ~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 277 (827)
++|++++|.+++..+..++++++|++|++++|.+++..|..++++++|++|++++|++++..+..++.+++|++|+|++|
T Consensus 112 ~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 112 KELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp CEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 77777777776666666777777777777777777666666777777777777777777666666777777777777777
Q ss_pred cCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCC
Q 047196 278 NLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNAS 340 (827)
Q Consensus 278 ~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 340 (827)
++++..|..+.++++|+.|++++|.+.+ .+++|+.|+++.|+++|.+|.+++.+.
T Consensus 192 ~l~~~~~~~~~~l~~L~~L~l~~N~~~~--------~~~~l~~l~~~~n~~~g~ip~~~~~~~ 246 (272)
T 3rfs_A 192 QLKSVPDGVFDRLTSLQYIWLHDNPWDC--------TCPGIRYLSEWINKHSGVVRNSAGSVA 246 (272)
T ss_dssp CCSCCCTTTTTTCTTCCEEECCSSCBCC--------CTTTTHHHHHHHHHTGGGBBCTTSCBC
T ss_pred cCCccCHHHHhCCcCCCEEEccCCCccc--------cCcHHHHHHHHHHhCCCcccCcccccC
Confidence 7777666666777777777777776654 244566677777777777777665543
No 95
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=3.9e-23 Score=217.20 Aligned_cols=181 Identities=23% Similarity=0.259 Sum_probs=100.0
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
++++|++++|++++..+..|..+++|++|++++|++++..+..|.++++|++|++++|++++..+..+..+++|++|+++
T Consensus 38 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~ 117 (270)
T 2o6q_A 38 DTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLD 117 (270)
T ss_dssp TCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECC
T ss_pred CCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECC
Confidence 45555566665555544555556666666666666654444445555666666666666655444455555556666666
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++..|..+..+++|++|+|++|.+++..+..|..+++|+.|+|++|.+++..+..+..++.|+.|++++|++++..
T Consensus 118 ~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 197 (270)
T 2o6q_A 118 RNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLKRVP 197 (270)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCcCCcCC
Confidence 66555554555555555555555555555544444555555555555555555544444555555555555555555444
Q ss_pred cccccCCCCCCEEECCCCcce
Q 047196 541 PSTIGDLKDLQNISLACNGLE 561 (827)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~ 561 (827)
+..+..+++|+.|+|++|.+.
T Consensus 198 ~~~~~~l~~L~~L~l~~N~~~ 218 (270)
T 2o6q_A 198 EGAFDSLEKLKMLQLQENPWD 218 (270)
T ss_dssp TTTTTTCTTCCEEECCSSCBC
T ss_pred HHHhccccCCCEEEecCCCee
Confidence 444555555555555555443
No 96
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.90 E-value=1e-23 Score=226.35 Aligned_cols=200 Identities=18% Similarity=0.189 Sum_probs=170.6
Q ss_pred cccEEEccCCcCccccCccc--cCCCCCceEeccCcccccccc----ccccCCCCCcEEECCCCCCCCCCCccccccccc
Q 047196 381 SLENIYISNCNIGGSIPQLI--SNLSNLLLLDLEGNKLTGSIP----VTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARL 454 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~--~~l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L 454 (827)
+|++|++++|++++..|..+ ..+++|++|+|++|++++..+ ..+..+++|++|+|++|++.+..|..+..+++|
T Consensus 92 ~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L 171 (310)
T 4glp_A 92 RLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPAL 171 (310)
T ss_dssp CCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTC
T ss_pred ceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCC
Confidence 58999999999999888888 889999999999999998655 345678999999999999998888999999999
Q ss_pred cEEecCCCccccc--C--CccccCCCCCCccccCCCcccccCC--c-cccccccccccCCCCCCCCCCCccccccc---c
Q 047196 455 NTLGLAGNKFSGS--I--PSCLGNLTSLRSPDLGSNRLTSVLP--S-TFWNLKDILFFDLSSNSLDGPLSLDIGNL---R 524 (827)
Q Consensus 455 ~~L~Ls~N~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p--~-~~~~l~~L~~LdLs~N~l~g~~p~~~~~l---~ 524 (827)
++|+|++|++.+. + +..+..+++|++|+|++|+++...+ . .+..+++|++|||++|++++.+|..++.+ +
T Consensus 172 ~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~ 251 (310)
T 4glp_A 172 TSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSS 251 (310)
T ss_dssp CEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCT
T ss_pred CEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcC
Confidence 9999999998753 2 3345788999999999999974222 1 25678999999999999999888888777 6
Q ss_pred cCceEEcccceeeecccccccCCCCCCEEECCCCccee-ecCCCCcCCceEeCcCCcCee
Q 047196 525 VVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEG-LIPESFGYLTELNLSFNKLEG 583 (827)
Q Consensus 525 ~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g-~ip~~~~~L~~L~ls~N~l~g 583 (827)
.|+.|+|++|+|+ .+|..+. ++|+.|||++|++++ .++..+.+|+.|++++|+++.
T Consensus 252 ~L~~L~Ls~N~l~-~lp~~~~--~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 252 ALNSLNLSFAGLE-QVPKGLP--AKLRVLDLSSNRLNRAPQPDELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp TCCCEECCSSCCC-SCCSCCC--SCCSCEECCSCCCCSCCCTTSCCCCSCEECSSTTTSC
T ss_pred cCCEEECCCCCCC-chhhhhc--CCCCEEECCCCcCCCCchhhhCCCccEEECcCCCCCC
Confidence 9999999999999 7788775 799999999999998 567778899999999999863
No 97
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.90 E-value=7.1e-23 Score=217.25 Aligned_cols=203 Identities=19% Similarity=0.160 Sum_probs=147.9
Q ss_pred ccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCcc
Q 047196 336 ITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNK 415 (827)
Q Consensus 336 ~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 415 (827)
+.++++++.+++++|.++.. |..+. .+++.|++++|++++..|..|..+++|+.|+|++|+
T Consensus 6 ~~~l~~l~~l~~~~~~l~~i----------------p~~~~---~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~ 66 (290)
T 1p9a_G 6 VSKVASHLEVNCDKRNLTAL----------------PPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAE 66 (290)
T ss_dssp EECSTTCCEEECTTSCCSSC----------------CSCCC---TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSC
T ss_pred ccccCCccEEECCCCCCCcC----------------CCCCC---CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCc
Confidence 44556666666666665522 11111 267778888888877777778888888888888888
Q ss_pred ccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCcc
Q 047196 416 LTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPST 495 (827)
Q Consensus 416 l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~ 495 (827)
+++..+. +.+++|++|+|++|+++ .+|..+..+++|++|++++|++++..|..|..+++|++|+|++|++++..+..
T Consensus 67 l~~~~~~--~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 143 (290)
T 1p9a_G 67 LTKLQVD--GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGL 143 (290)
T ss_dssp CCEEECC--SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTT
T ss_pred cCcccCC--CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhh
Confidence 8765432 67788888888888887 66777777888888888888887666677778888888888888888777777
Q ss_pred ccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcce
Q 047196 496 FWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLE 561 (827)
Q Consensus 496 ~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 561 (827)
|..+++|+.|+|++|++++..+..+..++.|+.|+|++|+|+ .+|..+..+.+|+.|+|++|.+.
T Consensus 144 ~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~-~ip~~~~~~~~L~~l~L~~Np~~ 208 (290)
T 1p9a_G 144 LTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPKGFFGSHLLPFAFLHGNPWL 208 (290)
T ss_dssp TTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-CCCTTTTTTCCCSEEECCSCCBC
T ss_pred cccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-ccChhhcccccCCeEEeCCCCcc
Confidence 777778888888888887655556677777777777777777 66777777777777777777664
No 98
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=6e-25 Score=241.38 Aligned_cols=254 Identities=18% Similarity=0.153 Sum_probs=193.6
Q ss_pred EEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCC----hhhhhcc-ccceEEecCCCCCCccccccCCC-----CC
Q 047196 102 ALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIP----PSIFTMH-KLKFLDFSDNQLSGSLSSVTFNL-----SS 171 (827)
Q Consensus 102 ~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p----~~~~~l~-~L~~LdLs~N~l~g~~p~~~~~l-----~~ 171 (827)
..+|+.++++|.+|..+...++|++|||++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 36788999999988888888889999999999987766 6778888 89999999999998777666654 89
Q ss_pred CcEEEcCCCCCCCCcchhHhhcc----ccccEEEeecccccccCCccC----CC-CCCCcEEEccCCCCccc----CCCc
Q 047196 172 VLDIRLDSDKLSGELPVNICNYL----HYLKVLFLAKNMFHGQIPLAL----SK-CKRLQLLNLGFKKLSGA----IPKE 238 (827)
Q Consensus 172 L~~L~L~~n~l~g~ip~~~~~~~----~~L~~L~Ls~N~l~~~~p~~l----~~-l~~L~~L~L~~n~l~~~----~p~~ 238 (827)
|++|+|++|.+++..+..+...+ ++|++|+|++|.+++..+..+ .. .++|++|+|++|.++.. ++..
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 99999999999877777655532 589999999999987665443 34 36899999999998853 3334
Q ss_pred CcCCc-cccEEEcccccccccccccccC----c-CCCcEEEeecccCccc----Cchhhhc-CCCccEEEecCCcccccc
Q 047196 239 ISNLT-ILRKISLRNNKLRGEIPHEIGY----L-PNLENLVLGFNNLVGV----VPAAIFN-MSTVKKIYLLDNSLLGSF 307 (827)
Q Consensus 239 ~~~l~-~L~~L~Ls~N~l~~~~p~~~~~----l-~~L~~L~Ls~N~l~~~----~p~~~~~-l~~L~~L~l~~n~l~~~~ 307 (827)
+..++ +|++|+|++|++++..+..+.. . ++|++|||++|.+++. ++..+.. .++|++|++++|.+.+..
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~ 241 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPS 241 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHH
Confidence 45555 8999999999998777655543 4 5899999999998873 4455555 358999999998887643
Q ss_pred Ch---hhhcCCCCccEEeCcCCccccc-------cCccccCCCCCcEEEcCCCcceee
Q 047196 308 SL---GIDLSLPNVERLNLGLNRFSGT-------IPSFITNASKLVYLDMGTNSFSGI 355 (827)
Q Consensus 308 ~~---~~~~~l~~L~~L~L~~N~l~~~-------~p~~~~~l~~L~~L~Ls~N~l~g~ 355 (827)
+. .....+++|+.|+|++|++.+. ++..+..+++|+.||+++|.+.+.
T Consensus 242 ~~~l~~~~~~l~~L~~L~L~~n~l~~i~~~~~~~l~~~~~~l~~L~~LdL~~N~l~~~ 299 (362)
T 3goz_A 242 LENLKLLKDSLKHLQTVYLDYDIVKNMSKEQCKALGAAFPNIQKIILVDKNGKEIHPS 299 (362)
T ss_dssp HHHHHHTTTTTTTCSEEEEEHHHHTTCCHHHHHHHHTTSTTCCEEEEECTTSCBCCGG
T ss_pred HHHHHHHHhcCCCccEEEeccCCccccCHHHHHHHHHHhccCCceEEEecCCCcCCCc
Confidence 32 2223677888999988884432 334567788888888888887654
No 99
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.89 E-value=2.3e-23 Score=214.66 Aligned_cols=196 Identities=18% Similarity=0.165 Sum_probs=174.3
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCcc-ccccccccccCCCCCcEEECCC-CCCCCCCCccccccccccEEe
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNK-LTGSIPVTFGRLQKLQGLYLPF-NKLAGSIPDQLCHLARLNTLG 458 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~-l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~ 458 (827)
++++|++++|++++..+..|.++++|+.|++++|+ +++..+..|.++++|++|++++ |++++..+..|.++++|++|+
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~ 111 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLG 111 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEe
Confidence 79999999999998888889999999999999997 8877777899999999999998 999977778899999999999
Q ss_pred cCCCcccccCCccccCCCCCC---ccccCCC-cccccCCcccccccccc-ccCCCCCCCCCCCcccccccccCceEEccc
Q 047196 459 LAGNKFSGSIPSCLGNLTSLR---SPDLGSN-RLTSVLPSTFWNLKDIL-FFDLSSNSLDGPLSLDIGNLRVVIGINLSR 533 (827)
Q Consensus 459 Ls~N~l~~~~p~~~~~l~~L~---~L~Ls~N-~l~~~~p~~~~~l~~L~-~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~ 533 (827)
+++|++++ +|. +..+++|+ +|++++| .+++..+..|.++++|+ .|++++|+++ .+|......+.|+.|++++
T Consensus 112 l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~~ 188 (239)
T 2xwt_C 112 IFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLNK 188 (239)
T ss_dssp EEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECTT
T ss_pred CCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcCC
Confidence 99999986 776 88888888 9999999 99988888899999999 9999999998 5555444448899999999
Q ss_pred ce-eeecccccccCC-CCCCEEECCCCcceeecCCCCcCCceEeCcCC
Q 047196 534 NN-FSGDIPSTIGDL-KDLQNISLACNGLEGLIPESFGYLTELNLSFN 579 (827)
Q Consensus 534 N~-l~g~ip~~~~~l-~~L~~L~Ls~N~l~g~ip~~~~~L~~L~ls~N 579 (827)
|+ +++..+..|..+ ++|+.|++++|++++..+..|.+|+.|+++++
T Consensus 189 n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 189 NKYLTVIDKDAFGGVYSGPSLLDVSQTSVTALPSKGLEHLKELIARNT 236 (239)
T ss_dssp CTTCCEECTTTTTTCSBCCSEEECTTCCCCCCCCTTCTTCSEEECTTC
T ss_pred CCCcccCCHHHhhccccCCcEEECCCCccccCChhHhccCceeeccCc
Confidence 95 997778889999 99999999999999877777899999999876
No 100
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.89 E-value=4.9e-25 Score=242.09 Aligned_cols=233 Identities=18% Similarity=0.176 Sum_probs=108.3
Q ss_pred EEeecccccccCCccCCCCCCCcEEEccCCCCcccCC----CcCcCCc-cccEEEcccccccccccccccCc-----CCC
Q 047196 200 LFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIP----KEISNLT-ILRKISLRNNKLRGEIPHEIGYL-----PNL 269 (827)
Q Consensus 200 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p----~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l-----~~L 269 (827)
++++.|.++|.+|..+...++|++|+|++|.+++..+ ..+.+++ +|++|+|++|++++..+..+..+ ++|
T Consensus 3 ~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L 82 (362)
T 3goz_A 3 YKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANV 82 (362)
T ss_dssp EECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTC
T ss_pred cccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCc
Confidence 4555555555555555555555555555555554443 3444454 55555555555554444444443 555
Q ss_pred cEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCC-CCccEEeCcCCccccccCcccc----C-CCCCc
Q 047196 270 ENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSL-PNVERLNLGLNRFSGTIPSFIT----N-ASKLV 343 (827)
Q Consensus 270 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l-~~L~~L~L~~N~l~~~~p~~~~----~-l~~L~ 343 (827)
++|+|++|.+++..+..+... +. .. ++|++|+|++|++++..+..+. . .++|+
T Consensus 83 ~~L~Ls~n~l~~~~~~~l~~~--------------------l~-~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~ 141 (362)
T 3goz_A 83 TSLNLSGNFLSYKSSDELVKT--------------------LA-AIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASIT 141 (362)
T ss_dssp CEEECCSSCGGGSCHHHHHHH--------------------HH-TSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCC
T ss_pred cEEECcCCcCChHHHHHHHHH--------------------HH-hCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCcee
Confidence 555555555554444333221 00 22 4555555555555544333222 2 23555
Q ss_pred EEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccc----cCC-CCCceEeccCccccc
Q 047196 344 YLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLI----SNL-SNLLLLDLEGNKLTG 418 (827)
Q Consensus 344 ~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~----~~l-~~L~~L~Ls~N~l~g 418 (827)
+|++++|.+++..+. .++..+.....+|++|+|++|++++..+..+ ..+ ++|+.|||++|++++
T Consensus 142 ~L~Ls~N~l~~~~~~-----------~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~ 210 (362)
T 3goz_A 142 SLNLRGNDLGIKSSD-----------ELIQILAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGL 210 (362)
T ss_dssp EEECTTSCGGGSCHH-----------HHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGG
T ss_pred EEEccCCcCCHHHHH-----------HHHHHHhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCCh
Confidence 555555555421110 0111112222245555555555554444322 223 356666666666554
Q ss_pred c----ccccccC-CCCCcEEECCCCCCCCCCC----ccccccccccEEecCCCcc
Q 047196 419 S----IPVTFGR-LQKLQGLYLPFNKLAGSIP----DQLCHLARLNTLGLAGNKF 464 (827)
Q Consensus 419 ~----~p~~~~~-l~~L~~L~Ls~N~l~g~~p----~~~~~l~~L~~L~Ls~N~l 464 (827)
. ++..+.. .++|+.|+|++|.+++..+ ..+..+++|+.|++++|.+
T Consensus 211 ~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L~~n~l 265 (362)
T 3goz_A 211 KSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYLDYDIV 265 (362)
T ss_dssp SCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEEEHHHH
T ss_pred hHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEeccCCc
Confidence 2 2333333 2355555555555554332 1223344455555555553
No 101
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.89 E-value=1.2e-23 Score=229.21 Aligned_cols=150 Identities=23% Similarity=0.307 Sum_probs=115.7
Q ss_pred HhhcccccceEecCCceEEEEEEec----CCcEEEEEEEcccchHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCcee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH----DGIEVAIKVFHQNCAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKA 747 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~ 747 (827)
..+.|+..+.||+|+||+||+|+.+ +++.||||++.... ...++.+|+++++++ +|||||++++++.+.+..+
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~--~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~ 96 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS--HPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVV 96 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS--CHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc--CHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEE
Confidence 3467999999999999999999753 46889999986543 234678999999998 6999999999998877655
Q ss_pred eeeeccCC-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecccccccCCCc
Q 047196 748 LDCLHSTN-------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRS 809 (827)
Q Consensus 748 l~~l~~~~-------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~~~~~~~~ 809 (827)
+...+... ..++..+...++.|++.||+||| +.+|+||||||+||| |||+|+.......
T Consensus 97 lvmE~~~g~~L~~~~~~l~~~~~~~~~~qll~al~ylH---~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~ 173 (361)
T 4f9c_A 97 IAMPYLEHESFLDILNSLSFQEVREYMLNLFKALKRIH---QFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKI 173 (361)
T ss_dssp EEEECCCCCCHHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSC
T ss_pred EEEeCCCcccHHHHHcCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccc
Confidence 53333222 34677778889999999999996 678999999999998 9999986543211
Q ss_pred c---------------------------ccccceecccccccccC
Q 047196 810 M---------------------------IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~---------------------------~~~~~~gt~~Y~APE~l 827 (827)
. ..+..+||++|||||++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 218 (361)
T 4f9c_A 174 ELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVL 218 (361)
T ss_dssp GGGGGC--------------------------CCCCGGGCCHHHH
T ss_pred cccccccccccccccccccccccccccccccccccCccccCHHHH
Confidence 0 11234699999999974
No 102
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.89 E-value=4.4e-25 Score=239.86 Aligned_cols=269 Identities=17% Similarity=0.208 Sum_probs=151.3
Q ss_pred CCCcccceecCCCCCcEEEEEcCCCCCccccCccccCC--CCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCc
Q 047196 84 SVCNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNL--SSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGS 161 (827)
Q Consensus 84 ~~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L--~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~ 161 (827)
-|..|.++.|+. ..++.+|++++.+. +..+..+ +++++|++++|.+.+..|. +..+++|++|+|++|.+++.
T Consensus 35 vc~~W~~~~~~~--~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~ 108 (336)
T 2ast_B 35 VCKRWYRLASDE--SLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVS 108 (336)
T ss_dssp SCHHHHHHHTCS--TTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHH
T ss_pred HHHHHHHHhcCc--hhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHH
Confidence 356899999874 35778888888776 3456666 7888888888888766554 55788888888888887755
Q ss_pred -cccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecc-ccccc-CCccCCCCCCCcEEEccCC-CCcccCCC
Q 047196 162 -LSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKN-MFHGQ-IPLALSKCKRLQLLNLGFK-KLSGAIPK 237 (827)
Q Consensus 162 -~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N-~l~~~-~p~~l~~l~~L~~L~L~~n-~l~~~~p~ 237 (827)
+|..+..+++|++|++++|.+++..|..+.. +++|++|++++| .+++. ++..+.++++|++|++++| .+++.
T Consensus 109 ~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~-~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~--- 184 (336)
T 2ast_B 109 TLHGILSQCSKLQNLSLEGLRLSDPIVNTLAK-NSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEK--- 184 (336)
T ss_dssp HHHHHHTTBCCCSEEECTTCBCCHHHHHHHTT-CTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHH---
T ss_pred HHHHHHhhCCCCCEEeCcCcccCHHHHHHHhc-CCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChH---
Confidence 6666666666666666666555444444443 335555555555 34431 3333444444444444444 44432
Q ss_pred cCcCCccccEEEcccccccccccccccCcC-CCcEEEeecc--cCc-ccCchhhhcCCCccEEEecCCc-cccccChhhh
Q 047196 238 EISNLTILRKISLRNNKLRGEIPHEIGYLP-NLENLVLGFN--NLV-GVVPAAIFNMSTVKKIYLLDNS-LLGSFSLGID 312 (827)
Q Consensus 238 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~-~L~~L~Ls~N--~l~-~~~p~~~~~l~~L~~L~l~~n~-l~~~~~~~~~ 312 (827)
.++..+..++ +|++|+|++| .++ +.+|..+.++++|+.|++++|. +++..+..+.
T Consensus 185 --------------------~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~l~ 244 (336)
T 2ast_B 185 --------------------HVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFF 244 (336)
T ss_dssp --------------------HHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCTTCCGGGGGGGG
T ss_pred --------------------HHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCCcCCHHHHHHHh
Confidence 1344444444 5555555554 233 3334444445555555555554 3333333332
Q ss_pred cCCCCccEEeCcCCc-cccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCc
Q 047196 313 LSLPNVERLNLGLNR-FSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCN 391 (827)
Q Consensus 313 ~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~ 391 (827)
.+++|+.|++++|. +.......+.++++|+.|++++| ++ . ..+..+...+..|++++|+
T Consensus 245 -~l~~L~~L~l~~~~~~~~~~~~~l~~~~~L~~L~l~~~-i~----~--------------~~~~~l~~~l~~L~l~~n~ 304 (336)
T 2ast_B 245 -QLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI-VP----D--------------GTLQLLKEALPHLQINCSH 304 (336)
T ss_dssp -GCTTCCEEECTTCTTCCGGGGGGGGGCTTCCEEECTTS-SC----T--------------TCHHHHHHHSTTSEESCCC
T ss_pred -CCCCCCEeeCCCCCCCCHHHHHHHhcCCCCCEEeccCc-cC----H--------------HHHHHHHhhCcceEEeccc
Confidence 44556666666553 22111124556667777777666 21 1 1222222246666677777
Q ss_pred CccccCccccC
Q 047196 392 IGGSIPQLISN 402 (827)
Q Consensus 392 l~g~~p~~~~~ 402 (827)
+++..|..+++
T Consensus 305 l~~~~~~~~~~ 315 (336)
T 2ast_B 305 FTTIARPTIGN 315 (336)
T ss_dssp SCCTTCSSCSS
T ss_pred CccccCCcccc
Confidence 77777777666
No 103
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.89 E-value=5.2e-23 Score=220.84 Aligned_cols=224 Identities=17% Similarity=0.178 Sum_probs=167.3
Q ss_pred CCCCEEECCCCCCCccCCh---hhhhccccceEEecCCCCCCcccccc--CCCCCCcEEEcCCCCCCCCcc----hhHhh
Q 047196 122 SSLTTLNLSHNKLSGDIPP---SIFTMHKLKFLDFSDNQLSGSLSSVT--FNLSSVLDIRLDSDKLSGELP----VNICN 192 (827)
Q Consensus 122 ~~L~~L~Ls~N~l~g~~p~---~~~~l~~L~~LdLs~N~l~g~~p~~~--~~l~~L~~L~L~~n~l~g~ip----~~~~~ 192 (827)
..++.|++.++.++...-. .+..+++|++|+|++|.+++..|..+ ..+++|++|+|++|.+++..| ..+.
T Consensus 64 ~~l~~l~l~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~- 142 (310)
T 4glp_A 64 LRVRRLTVGAAQVPAQLLVGALRVLAYSRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQW- 142 (310)
T ss_dssp CCCCEEEECSCCCBHHHHHHHHHHHHHSCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTT-
T ss_pred cceeEEEEeCCcCCHHHHHHHHHhcccCceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhh-
Confidence 3578899998887632111 23346789999999999999999888 899999999999999998665 2223
Q ss_pred ccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCccc--C--CCcCcCCccccEEEcccccccccccc----ccc
Q 047196 193 YLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGA--I--PKEISNLTILRKISLRNNKLRGEIPH----EIG 264 (827)
Q Consensus 193 ~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~--~--p~~~~~l~~L~~L~Ls~N~l~~~~p~----~~~ 264 (827)
.+++|++|+|++|.+++..|..++++++|++|+|++|++.+. + +..++++++|++|+|++|+++ .+|. .++
T Consensus 143 ~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~ 221 (310)
T 4glp_A 143 LKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAA 221 (310)
T ss_dssp BCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHH
T ss_pred hccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHh
Confidence 466899999999999888888999999999999999998752 2 233578889999999999986 3333 256
Q ss_pred CcCCCcEEEeecccCcccCchhhhcC---CCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCC
Q 047196 265 YLPNLENLVLGFNNLVGVVPAAIFNM---STVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASK 341 (827)
Q Consensus 265 ~l~~L~~L~Ls~N~l~~~~p~~~~~l---~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 341 (827)
.+++|++|+|++|++++..|..+..+ ++|++|++++|.+. .+|..+. ++|++|+|++|++++. |. +..+++
T Consensus 222 ~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~---~~L~~L~Ls~N~l~~~-~~-~~~l~~ 295 (310)
T 4glp_A 222 AGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP---AKLRVLDLSSNRLNRA-PQ-PDELPE 295 (310)
T ss_dssp HTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC---SCCSCEECCSCCCCSC-CC-TTSCCC
T ss_pred cCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc---CCCCEEECCCCcCCCC-ch-hhhCCC
Confidence 78899999999999998878777665 47777777777766 4554432 5677777777777653 22 455666
Q ss_pred CcEEEcCCCcce
Q 047196 342 LVYLDMGTNSFS 353 (827)
Q Consensus 342 L~~L~Ls~N~l~ 353 (827)
|+.|++++|.++
T Consensus 296 L~~L~L~~N~l~ 307 (310)
T 4glp_A 296 VDNLTLDGNPFL 307 (310)
T ss_dssp CSCEECSSTTTS
T ss_pred ccEEECcCCCCC
Confidence 666666666654
No 104
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.89 E-value=2e-22 Score=213.80 Aligned_cols=152 Identities=26% Similarity=0.340 Sum_probs=76.5
Q ss_pred cEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcC
Q 047196 99 RVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLD 178 (827)
Q Consensus 99 ~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~ 178 (827)
.++.+++++++++. +|..+. +++++|+|++|.+++..|..|..+++|++|+|++|.+++..+. ..++
T Consensus 11 ~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~--~~l~-------- 77 (290)
T 1p9a_G 11 SHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVD--GTLP-------- 77 (290)
T ss_dssp TCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEECC--SCCT--------
T ss_pred CccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccCC--CCCC--------
Confidence 45555555555552 333332 4555566666665555555555555666666665555532211 2333
Q ss_pred CCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEccccccccc
Q 047196 179 SDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGE 258 (827)
Q Consensus 179 ~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 258 (827)
+|++|++++|.++ .+|..+.++++|++|++++|++++..|..|.++++|++|+|++|++++.
T Consensus 78 -----------------~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~ 139 (290)
T 1p9a_G 78 -----------------VLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTL 139 (290)
T ss_dssp -----------------TCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCC
T ss_pred -----------------cCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCcc
Confidence 4444444444444 3444445555555555555555544444455555555555555555544
Q ss_pred ccccccCcCCCcEEEeecccCcc
Q 047196 259 IPHEIGYLPNLENLVLGFNNLVG 281 (827)
Q Consensus 259 ~p~~~~~l~~L~~L~Ls~N~l~~ 281 (827)
.+..|..+++|++|+|++|++++
T Consensus 140 ~~~~~~~l~~L~~L~L~~N~l~~ 162 (290)
T 1p9a_G 140 PPGLLTPTPKLEKLSLANNNLTE 162 (290)
T ss_dssp CTTTTTTCTTCCEEECTTSCCSC
T ss_pred ChhhcccccCCCEEECCCCcCCc
Confidence 44444455555555555555543
No 105
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.89 E-value=2.8e-23 Score=240.29 Aligned_cols=148 Identities=22% Similarity=0.321 Sum_probs=121.9
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeecc
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHS 753 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~~ 753 (827)
++|+..+.||+|+||+||+|+.+ +|+.||||++........+.+.+|+++|++++|||||++++++.+....++...+.
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~ 236 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFM 236 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeec
Confidence 57899999999999999999864 69999999997766556678999999999999999999999998877655533322
Q ss_pred C-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------eecccccccCCCcc
Q 047196 754 T-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------DFGIGRLLTGDRSM 810 (827)
Q Consensus 754 ~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------DFGla~~~~~~~~~ 810 (827)
. ...+++.+...++.||++||+||| +++|+||||||+||| |||+|+.+......
T Consensus 237 ~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~ylH---~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~ 313 (573)
T 3uto_A 237 SGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMH---ENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSV 313 (573)
T ss_dssp CCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEE
T ss_pred CCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCce
Confidence 1 234567778889999999999996 568999999999998 99999987544332
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
...+||+.|||||++
T Consensus 314 --~~~~GT~~y~APEv~ 328 (573)
T 3uto_A 314 --KVTTGTAEFAAPEVA 328 (573)
T ss_dssp --EEECSSGGGCCHHHH
T ss_pred --eeeEECccccCHHHh
Confidence 335699999999974
No 106
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.88 E-value=8.4e-23 Score=234.64 Aligned_cols=147 Identities=23% Similarity=0.261 Sum_probs=114.8
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch------HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCcee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA------MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKA 747 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~ 747 (827)
++|+..++||+|+||+||+|+.+ +|+.||||++.+... ....+..+|+++++.++|||||++++++.+++..+
T Consensus 189 ddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~ly 268 (689)
T 3v5w_A 189 NDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268 (689)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEE
T ss_pred HHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEE
Confidence 57999999999999999999865 699999999964321 11122334567777889999999999998887665
Q ss_pred eeeeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 748 LDCLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 748 l~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
+...+..+ +.++......++.+|+.||+||| +++||||||||+||| |||+|+.+...
T Consensus 269 lVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~yLH---~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~ 345 (689)
T 3v5w_A 269 FILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK 345 (689)
T ss_dssp EEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC
T ss_pred EEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCchHHeEEeCCCCEEecccceeeecCCC
Confidence 53333222 34667777889999999999995 678999999999999 99999877544
Q ss_pred CccccccceecccccccccC
Q 047196 808 RSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~l 827 (827)
.. .+.+||+.|||||++
T Consensus 346 ~~---~t~~GTp~YmAPEvl 362 (689)
T 3v5w_A 346 KP---HASVGTHGYMAPEVL 362 (689)
T ss_dssp CC---CSCCSCGGGCCHHHH
T ss_pred CC---CCccCCcCccCHHHH
Confidence 32 345799999999974
No 107
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.88 E-value=5.5e-22 Score=205.98 Aligned_cols=181 Identities=26% Similarity=0.295 Sum_probs=147.9
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+.++++++++.++ .+|..+. ++++.|+|++|++++..+..|.++++|++|+|++|++++..|..+..+++|++|+|+
T Consensus 15 ~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 91 (251)
T 3m19_A 15 GKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLA 91 (251)
T ss_dssp GGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECT
T ss_pred CCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECC
Confidence 5677888888887 4555544 578888888888888888888888888888888888888777778888888888888
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++..+..+..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..+..++.+++|+.|+|++|+|++..
T Consensus 92 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~ 171 (251)
T 3m19_A 92 NNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVP 171 (251)
T ss_dssp TSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCC
T ss_pred CCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccC
Confidence 88888777777888888888888888888777777788888888888888888777767888888888888888888777
Q ss_pred cccccCCCCCCEEECCCCcceeec
Q 047196 541 PSTIGDLKDLQNISLACNGLEGLI 564 (827)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~g~i 564 (827)
|..+..+++|+.|+|++|.+++..
T Consensus 172 ~~~~~~l~~L~~L~l~~N~~~c~~ 195 (251)
T 3m19_A 172 HGAFDRLGKLQTITLFGNQFDCSR 195 (251)
T ss_dssp TTTTTTCTTCCEEECCSCCBCTTS
T ss_pred HHHHhCCCCCCEEEeeCCceeCCc
Confidence 777888888888888888887653
No 108
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=3e-22 Score=206.33 Aligned_cols=196 Identities=18% Similarity=0.127 Sum_probs=143.2
Q ss_pred CCCEEECCCCCCCccCChhhhhccccceEEecCCC-CCCccccccCCCCCCcEEEcCC-CCCCCCcchhHhhccccccEE
Q 047196 123 SLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQ-LSGSLSSVTFNLSSVLDIRLDS-DKLSGELPVNICNYLHYLKVL 200 (827)
Q Consensus 123 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~-l~g~~p~~~~~l~~L~~L~L~~-n~l~g~ip~~~~~~~~~L~~L 200 (827)
+|++|+|++|++++..+..|.++++|++|++++|. +++..+..+.++++|++|++++ |.++ .+|...+..+++|++|
T Consensus 32 ~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~-~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 32 STQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLT-YIDPDALKELPLLKFL 110 (239)
T ss_dssp TCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCC-EECTTSEECCTTCCEE
T ss_pred cccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCee-EcCHHHhCCCCCCCEE
Confidence 67777777777776666677777777777777776 6655555677777777777777 7776 4555544445678888
Q ss_pred EeecccccccCCccCCCCCCCc---EEEccCC-CCcccCCCcCcCCcccc-EEEcccccccccccccccCcCCCcEEEee
Q 047196 201 FLAKNMFHGQIPLALSKCKRLQ---LLNLGFK-KLSGAIPKEISNLTILR-KISLRNNKLRGEIPHEIGYLPNLENLVLG 275 (827)
Q Consensus 201 ~Ls~N~l~~~~p~~l~~l~~L~---~L~L~~n-~l~~~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls 275 (827)
++++|.+++ +|. ++.+++|+ +|++++| .+++..+..|.++++|+ +|++++|+++ .+|......++|++|+|+
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L~ 187 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYLN 187 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEECT
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEcC
Confidence 888888876 555 77777777 8888888 88777677788888888 8888888887 555544344788888888
Q ss_pred ccc-CcccCchhhhcC-CCccEEEecCCccccccChhhhcCCCCccEEeCcCC
Q 047196 276 FNN-LVGVVPAAIFNM-STVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLN 326 (827)
Q Consensus 276 ~N~-l~~~~p~~~~~l-~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N 326 (827)
+|+ +++..+..+.++ ++|+.|++++|.+.+ +|.. .+++|+.|+++++
T Consensus 188 ~n~~l~~i~~~~~~~l~~~L~~L~l~~N~l~~-l~~~---~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 188 KNKYLTVIDKDAFGGVYSGPSLLDVSQTSVTA-LPSK---GLEHLKELIARNT 236 (239)
T ss_dssp TCTTCCEECTTTTTTCSBCCSEEECTTCCCCC-CCCT---TCTTCSEEECTTC
T ss_pred CCCCcccCCHHHhhccccCCcEEECCCCcccc-CChh---HhccCceeeccCc
Confidence 884 877767777777 888888888888764 4433 4678888888765
No 109
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.3e-23 Score=232.87 Aligned_cols=138 Identities=21% Similarity=0.308 Sum_probs=81.1
Q ss_pred CCCcEEEccCCCCc-ccCC---CcCcCCccccEEEccccccc--c---cccccccCcCCCcEEEeecccCc----ccCch
Q 047196 219 KRLQLLNLGFKKLS-GAIP---KEISNLTILRKISLRNNKLR--G---EIPHEIGYLPNLENLVLGFNNLV----GVVPA 285 (827)
Q Consensus 219 ~~L~~L~L~~n~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~Ls~N~l~----~~~p~ 285 (827)
++|++|++++|.++ +.+| ..+..+++|++|++++|+++ | ..|..+..+++|++|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 55666666666654 2333 24445556666666666655 2 23335556666666666666664 44555
Q ss_pred hhhcCCCccEEEecCCccccc----cChhhh-cCCCCccEEeCcCCcccc----ccCccc-cCCCCCcEEEcCCCcceee
Q 047196 286 AIFNMSTVKKIYLLDNSLLGS----FSLGID-LSLPNVERLNLGLNRFSG----TIPSFI-TNASKLVYLDMGTNSFSGI 355 (827)
Q Consensus 286 ~~~~l~~L~~L~l~~n~l~~~----~~~~~~-~~l~~L~~L~L~~N~l~~----~~p~~~-~~l~~L~~L~Ls~N~l~g~ 355 (827)
.+..+++|+.|++++|.+.+. ++..+. ..+++|+.|+|++|++++ .+|..+ .++++|++|++++|.+++.
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l~~~ 318 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSEE 318 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBSCTT
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcCCcc
Confidence 566666666666666665543 222221 136677777777777776 366665 5577777777777777654
Q ss_pred c
Q 047196 356 I 356 (827)
Q Consensus 356 ~ 356 (827)
.
T Consensus 319 ~ 319 (386)
T 2ca6_A 319 D 319 (386)
T ss_dssp S
T ss_pred h
Confidence 3
No 110
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.87 E-value=5.7e-23 Score=223.18 Aligned_cols=255 Identities=19% Similarity=0.251 Sum_probs=200.5
Q ss_pred CCCEEECCCCCCCccCChhhhhc--cccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEE
Q 047196 123 SLTTLNLSHNKLSGDIPPSIFTM--HKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVL 200 (827)
Q Consensus 123 ~L~~L~Ls~N~l~g~~p~~~~~l--~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L 200 (827)
.++.||+++|.+. |..+..+ +++++|++++|.+.+..+. +..+ ++|++|
T Consensus 48 ~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~-------------------------~~L~~L 98 (336)
T 2ast_B 48 LWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSP-------------------------FRVQHM 98 (336)
T ss_dssp TSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCC-------------------------BCCCEE
T ss_pred hheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccC-------------------------CCCCEE
Confidence 4789999999886 5677777 8999999999998876543 2222 367777
Q ss_pred Eeeccccccc-CCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccc-ccccc-ccccccCcCCCcEEEeecc
Q 047196 201 FLAKNMFHGQ-IPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNN-KLRGE-IPHEIGYLPNLENLVLGFN 277 (827)
Q Consensus 201 ~Ls~N~l~~~-~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N-~l~~~-~p~~~~~l~~L~~L~Ls~N 277 (827)
++++|.+++. +|..+..+++|++|++++|.+++..|..++.+++|++|++++| .+++. +|..+..+++|++|++++|
T Consensus 99 ~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 178 (336)
T 2ast_B 99 DLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWC 178 (336)
T ss_dssp ECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCC
T ss_pred EccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCC
Confidence 7777776655 6777788889999999999888888888888999999999999 67763 7777899999999999999
Q ss_pred -cCccc-CchhhhcCC-CccEEEecCC--ccc-cccChhhhcCCCCccEEeCcCCc-cccccCccccCCCCCcEEEcCCC
Q 047196 278 -NLVGV-VPAAIFNMS-TVKKIYLLDN--SLL-GSFSLGIDLSLPNVERLNLGLNR-FSGTIPSFITNASKLVYLDMGTN 350 (827)
Q Consensus 278 -~l~~~-~p~~~~~l~-~L~~L~l~~n--~l~-~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~Ls~N 350 (827)
.+++. ++..+..++ +|++|++++| .++ +.++..+. .+++|+.|++++|. +++..+..+..+++|+.|++++|
T Consensus 179 ~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~-~~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~ 257 (336)
T 2ast_B 179 FDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR-RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRC 257 (336)
T ss_dssp TTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHH-HCTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTC
T ss_pred CCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHh-hCCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCC
Confidence 99875 678889999 9999999999 455 44554443 78999999999999 78788889999999999999999
Q ss_pred cceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCC-CCCceEeccCccccccccccccC
Q 047196 351 SFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNL-SNLLLLDLEGNKLTGSIPVTFGR 426 (827)
Q Consensus 351 ~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l-~~L~~L~Ls~N~l~g~~p~~~~~ 426 (827)
. +..+..+ ..+..++ +|++|++++| ++. ..+..+ .++..|++++|++++..|..++.
T Consensus 258 ~--~~~~~~~------------~~l~~~~-~L~~L~l~~~-i~~---~~~~~l~~~l~~L~l~~n~l~~~~~~~~~~ 315 (336)
T 2ast_B 258 Y--DIIPETL------------LELGEIP-TLKTLQVFGI-VPD---GTLQLLKEALPHLQINCSHFTTIARPTIGN 315 (336)
T ss_dssp T--TCCGGGG------------GGGGGCT-TCCEEECTTS-SCT---TCHHHHHHHSTTSEESCCCSCCTTCSSCSS
T ss_pred C--CCCHHHH------------HHHhcCC-CCCEEeccCc-cCH---HHHHHHHhhCcceEEecccCccccCCcccc
Confidence 6 2211110 1344454 8999999999 432 234444 34788889999999999988765
No 111
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.87 E-value=1.5e-23 Score=232.55 Aligned_cols=110 Identities=20% Similarity=0.265 Sum_probs=51.0
Q ss_pred ccccEEEccccccc-cccc---ccccCcCCCcEEEeecccCc--c---cCchhhhcCCCccEEEecCCccc----cccCh
Q 047196 243 TILRKISLRNNKLR-GEIP---HEIGYLPNLENLVLGFNNLV--G---VVPAAIFNMSTVKKIYLLDNSLL----GSFSL 309 (827)
Q Consensus 243 ~~L~~L~Ls~N~l~-~~~p---~~~~~l~~L~~L~Ls~N~l~--~---~~p~~~~~l~~L~~L~l~~n~l~----~~~~~ 309 (827)
++|++|+|++|+++ +.+| ..+..+++|++|+|++|+++ | ..|..+..+++|+.|++++|.+. +.++.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 45555555555554 2233 23444455555555555554 1 22324445555555555555543 33333
Q ss_pred hhhcCCCCccEEeCcCCccccc----cCccc--cCCCCCcEEEcCCCcce
Q 047196 310 GIDLSLPNVERLNLGLNRFSGT----IPSFI--TNASKLVYLDMGTNSFS 353 (827)
Q Consensus 310 ~~~~~l~~L~~L~L~~N~l~~~----~p~~~--~~l~~L~~L~Ls~N~l~ 353 (827)
.+. .+++|+.|+|++|++++. +|..+ +.+++|+.|++++|.++
T Consensus 239 ~l~-~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~ 287 (386)
T 2ca6_A 239 ALK-SWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIE 287 (386)
T ss_dssp HGG-GCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCB
T ss_pred HHc-cCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCC
Confidence 332 445555555555555443 33333 22455555555555544
No 112
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.87 E-value=1.6e-22 Score=218.73 Aligned_cols=167 Identities=33% Similarity=0.542 Sum_probs=134.2
Q ss_pred cccccchhHHHHHhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchH-HHHHHHHHHHHHHhcCCCCceEEEee
Q 047196 661 TLRRFSYQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAM-ALKSFEAECEVMKNIRHRNHVKRISS 739 (827)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~~~~~ 739 (827)
..+.+++.++...+++|...+.||+|+||.||+|+.++|+.||||++...... ....+.+|++++++++|||||+++++
T Consensus 16 ~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~ 95 (326)
T 3uim_A 16 QLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGF 95 (326)
T ss_dssp CCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEE
T ss_pred ccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEE
Confidence 34678889999999999999999999999999999888999999998654322 23368999999999999999999999
Q ss_pred eecCCceee--eeecc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------
Q 047196 740 CSNEDFKAL--DCLHS------------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------- 796 (827)
Q Consensus 740 ~~~~~~~~l--~~l~~------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------- 796 (827)
+......++ +++.. ....+++..+..|+.++++||+|||..+.++|+||||||+||+
T Consensus 96 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl 175 (326)
T 3uim_A 96 CMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVV 175 (326)
T ss_dssp ECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEE
T ss_pred EecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEe
Confidence 987665443 32221 1123788889999999999999999877789999999999998
Q ss_pred -eecccccccCCCccccccceecccccccccC
Q 047196 797 -DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 -DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++..............||++|+|||++
T Consensus 176 ~Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 207 (326)
T 3uim_A 176 GDFGLAKLMDYKDTHVTTAVRGTIGHIAPEYL 207 (326)
T ss_dssp CCCSSCEECCSSSSCEECCCCSCGGGCCHHHH
T ss_pred ccCccccccCcccccccccccCCcCccCHHHh
Confidence 9999987754443333334589999999963
No 113
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.87 E-value=4.4e-22 Score=228.93 Aligned_cols=200 Identities=22% Similarity=0.333 Sum_probs=138.6
Q ss_pred CCCCCCCCCC-----cccce-ecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccce
Q 047196 77 QNSTSNTSVC-----NWIGI-TCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKF 150 (827)
Q Consensus 77 ~w~~~~~~~C-----~W~gv-~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~ 150 (827)
+|. .+.++| .|.|+ .|.. ++|+.|+|++|++++ +|..+. ++|++|+|++|+|+ .+| ..+++|++
T Consensus 35 ~W~-~~~~~~~~~~~~~~~l~~C~~--~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 35 KWE-KQALPGENRNEAVSLLKECLI--NQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHH-TTCCTTCCHHHHHHHHHHHHH--TTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHh-ccCCccccccchhhhcccccc--CCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 454 344567 79999 7863 479999999999998 777663 89999999999999 677 45799999
Q ss_pred EEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCC
Q 047196 151 LDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKK 230 (827)
Q Consensus 151 LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~ 230 (827)
|+|++|+|++ +|. +.+ +|++|+|++|.+++ +|. .+++|++|+|++|.+++ +|. .+++|++|+|++|.
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~----~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE----LPALLEYINADNNQLTM-LPE---LPTSLEVLSVRNNQ 171 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC----CCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC----cCccccEEeCCCCccCc-CCC---cCCCcCEEECCCCC
Confidence 9999999998 666 544 78888888888876 665 34577777777777775 454 46677777777777
Q ss_pred CcccCCCcCcCCccccEEEcccccccccccccccCcCCC-------cEEEeecccCcccCchhhhcCCCccEEEecCCcc
Q 047196 231 LSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNL-------ENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSL 303 (827)
Q Consensus 231 l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L-------~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l 303 (827)
+++ +|. +. ++|++|+|++|+|+ .+|. +.. +| ++|+|++|+|+. +|..++.+++|+.|++++|.+
T Consensus 172 L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~~N~l 242 (571)
T 3cvr_A 172 LTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILEDNPL 242 (571)
T ss_dssp CSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECCSSSC
T ss_pred CCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEeeCCcC
Confidence 776 555 54 67777777777776 5555 443 55 666666666663 455444444444444444444
Q ss_pred ccccC
Q 047196 304 LGSFS 308 (827)
Q Consensus 304 ~~~~~ 308 (827)
++.+|
T Consensus 243 ~~~~p 247 (571)
T 3cvr_A 243 SSRIR 247 (571)
T ss_dssp CHHHH
T ss_pred CCcCH
Confidence 44433
No 114
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.86 E-value=1.3e-21 Score=209.49 Aligned_cols=168 Identities=23% Similarity=0.371 Sum_probs=91.4
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|++|++++|++++..+ +..+++|++|++++|++++. + .+..+++|+.|++++|++++. |. +..+++|+.|+++
T Consensus 64 ~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~ 137 (308)
T 1h6u_A 64 NLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITDV-TP-LAGLSNLQVLYLD 137 (308)
T ss_dssp TCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCCC-GG-GTTCTTCCEEECC
T ss_pred CCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCCc-hh-hcCCCCCCEEECC
Confidence 44445555554443322 45555555555555555542 2 355555555555555555542 22 5555555555555
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++..+ +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..++.|+.|++++|++++..
T Consensus 138 ~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~~~~ 211 (308)
T 1h6u_A 138 LNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVS 211 (308)
T ss_dssp SSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCCBCG
T ss_pred CCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccCccc
Confidence 555553322 5555556666666665554333 5555566666666666654433 555666666666666666443
Q ss_pred cccccCCCCCCEEECCCCccee
Q 047196 541 PSTIGDLKDLQNISLACNGLEG 562 (827)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~g 562 (827)
| +..+++|+.|++++|.+++
T Consensus 212 ~--l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 212 P--LANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp G--GTTCTTCCEEEEEEEEEEC
T ss_pred c--ccCCCCCCEEEccCCeeec
Confidence 2 5666666666666666654
No 115
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.85 E-value=7.9e-22 Score=220.78 Aligned_cols=157 Identities=21% Similarity=0.258 Sum_probs=124.0
Q ss_pred hHHHHHhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchH---HHHHHHHHHHHHHhcCCCCceEEEeeeecC
Q 047196 668 QDLFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAM---ALKSFEAECEVMKNIRHRNHVKRISSCSNE 743 (827)
Q Consensus 668 ~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~---~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~ 743 (827)
.++...+++|+..++||+|+||+||+|+.+ +++.||||++...... ..+.+.+|+.+++.++|||||++++++.+.
T Consensus 67 ~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~ 146 (437)
T 4aw2_A 67 KQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146 (437)
T ss_dssp HHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECS
T ss_pred hcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeC
Confidence 344445678999999999999999999976 5889999999653221 223488999999999999999999999887
Q ss_pred CceeeeeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccc
Q 047196 744 DFKALDCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802 (827)
Q Consensus 744 ~~~~l~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~ 802 (827)
+..++...+.. ...+++.....++.+++.||+||| +.+|+||||||+||| |||+|+
T Consensus 147 ~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILl~~~g~vkL~DFGla~ 223 (437)
T 4aw2_A 147 NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH---QLHYVHRDIKPDNILMDMNGHIRLADFGSCL 223 (437)
T ss_dssp SEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH---hCCeEecccCHHHeeEcCCCCEEEcchhhhh
Confidence 76554333221 245777888889999999999996 567999999999998 999998
Q ss_pred cccCCCccccccceecccccccccC
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
....+........+||++|||||++
T Consensus 224 ~~~~~~~~~~~~~~GT~~Y~APE~l 248 (437)
T 4aw2_A 224 KLMEDGTVQSSVAVGTPDYISPEIL 248 (437)
T ss_dssp ECCTTSCEECCSCCSCGGGCCHHHH
T ss_pred hcccCCCcccccccCCcCeeChHHH
Confidence 7765544333445699999999974
No 116
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.85 E-value=3.2e-21 Score=207.96 Aligned_cols=161 Identities=24% Similarity=0.254 Sum_probs=127.0
Q ss_pred cccchhHHHHHhhc----------ccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCC
Q 047196 663 RRFSYQDLFRATEK----------FSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHR 731 (827)
Q Consensus 663 ~~~~~~~~~~~~~~----------~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~ 731 (827)
+.++++++..+++. |+..+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~ 102 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHF 102 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCT
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCC
Confidence 34667777766653 666789999999999999975 7999999999765545567789999999999999
Q ss_pred CceEEEeeeecCCceeeeeeccC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------
Q 047196 732 NHVKRISSCSNEDFKALDCLHST---------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------ 796 (827)
Q Consensus 732 niv~~~~~~~~~~~~~l~~l~~~---------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------ 796 (827)
|||++++++...+..++...+.. ...+++.....++.++++||+||| +.+|+||||||+||+
T Consensus 103 niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~ 179 (321)
T 2c30_A 103 NVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCEAVLQALAYLH---AQGVIHRDIKSDSILLTLDGR 179 (321)
T ss_dssp TBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCC
T ss_pred CcceEEEEEEECCEEEEEEecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEECCCCc
Confidence 99999999988765554333221 235788889999999999999996 468999999999998
Q ss_pred ----eecccccccCCCccccccceecccccccccC
Q 047196 797 ----DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ----DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++........ .....||++|+|||++
T Consensus 180 ~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~ 213 (321)
T 2c30_A 180 VKLSDFGFCAQISKDVPK-RKSLVGTPYWMAPEVI 213 (321)
T ss_dssp EEECCCTTCEECCSSSCC-BCCCCSCGGGCCHHHH
T ss_pred EEEeeeeeeeecccCccc-cccccCCccccCHhhh
Confidence 99999876544322 2334699999999963
No 117
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.85 E-value=6.9e-21 Score=203.93 Aligned_cols=189 Identities=21% Similarity=0.346 Sum_probs=166.9
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|++|++++|+++. +| .+..+++|+.|++++|++++..+ +..+++|++|+|++|++++. | .+..+++|+.|+++
T Consensus 42 ~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~ 115 (308)
T 1h6u_A 42 GITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLT 115 (308)
T ss_dssp TCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECT
T ss_pred CcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECC
Confidence 78899999998875 45 58889999999999999997655 99999999999999999863 3 68899999999999
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++ +|. +..+++|++|++++|.+++..+ +..+++|+.|++++|.+++..+ +..++.|+.|++++|++++..
T Consensus 116 ~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~ 189 (308)
T 1h6u_A 116 STQITD-VTP-LAGLSNLQVLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP--LANLSKLTTLKADDNKISDIS 189 (308)
T ss_dssp TSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCG
T ss_pred CCCCCC-chh-hcCCCCCCEEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChh--hcCCCCCCEEECCCCccCcCh
Confidence 999986 443 8999999999999999998655 8899999999999999997555 889999999999999999765
Q ss_pred cccccCCCCCCEEECCCCcceeecC-CCCcCCceEeCcCCcCee
Q 047196 541 PSTIGDLKDLQNISLACNGLEGLIP-ESFGYLTELNLSFNKLEG 583 (827)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~g~ip-~~~~~L~~L~ls~N~l~g 583 (827)
+ +..+++|+.|+|++|++++..| ..+.+|+.|++++|++++
T Consensus 190 ~--l~~l~~L~~L~L~~N~l~~~~~l~~l~~L~~L~l~~N~i~~ 231 (308)
T 1h6u_A 190 P--LASLPNLIEVHLKNNQISDVSPLANTSNLFIVTLTNQTITN 231 (308)
T ss_dssp G--GGGCTTCCEEECTTSCCCBCGGGTTCTTCCEEEEEEEEEEC
T ss_pred h--hcCCCCCCEEEccCCccCccccccCCCCCCEEEccCCeeec
Confidence 4 8999999999999999998765 334589999999999976
No 118
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.85 E-value=9.2e-22 Score=212.23 Aligned_cols=159 Identities=35% Similarity=0.532 Sum_probs=126.0
Q ss_pred cchhHHHHHhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC
Q 047196 665 FSYQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED 744 (827)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~ 744 (827)
+.+.++..++++|+..+.||+|+||.||+|+.++|+.||||++........+.+.+|++++++++|||||++++++...+
T Consensus 29 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 108 (321)
T 2qkw_B 29 VPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERN 108 (321)
T ss_dssp -CCSCCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTT
T ss_pred ecHHHHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCC
Confidence 34445556778999999999999999999998889999999987665556778999999999999999999999998766
Q ss_pred ceee--eeeccC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecc
Q 047196 745 FKAL--DCLHST------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGI 800 (827)
Q Consensus 745 ~~~l--~~l~~~------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGl 800 (827)
..++ ++.... ...+++.++..++.++++||+||| +++|+||||||+||+ |||+
T Consensus 109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~ 185 (321)
T 2qkw_B 109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGI 185 (321)
T ss_dssp CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCSTTEEECTTCCEEECCCTT
T ss_pred eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhc---CCCeecCCCCHHHEEECCCCCEEEeeccc
Confidence 4443 322211 123778889999999999999996 468999999999998 9999
Q ss_pred cccccCCCcc-ccccceeccccccccc
Q 047196 801 GRLLTGDRSM-IQTETLVTIGYMAPGL 826 (827)
Q Consensus 801 a~~~~~~~~~-~~~~~~gt~~Y~APE~ 826 (827)
++........ ......||++|+|||+
T Consensus 186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~ 212 (321)
T 2qkw_B 186 SKKGTELDQTHLSTVVKGTLGYIDPEY 212 (321)
T ss_dssp CEECSSSSCCCCBCCCEEETTTCCHHH
T ss_pred ccccccccccccccccCCCccccCHHH
Confidence 9875432221 2233458999999996
No 119
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=6.6e-21 Score=191.76 Aligned_cols=161 Identities=23% Similarity=0.245 Sum_probs=97.4
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
++++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|+|++|++++..+..+..+++|++|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~ 108 (208)
T 2o6s_A 29 QTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALN 108 (208)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcC
Confidence 46666666666665555556666666666666666665555555666666666666666665555555666666666666
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+.+. ++.|+.|+++.|+++|.+
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~-------~~~l~~L~~~~n~~~g~i 181 (208)
T 2o6s_A 109 TNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT-------CPGIRYLSEWINKHSGVV 181 (208)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC-------TTTTHHHHHHHHHCTTTB
T ss_pred CCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC-------CCCHHHHHHHHHhCCcee
Confidence 6666654454556666666666666666655555556666666666666655542 234555566666666666
Q ss_pred cccccCCC
Q 047196 541 PSTIGDLK 548 (827)
Q Consensus 541 p~~~~~l~ 548 (827)
|++++.++
T Consensus 182 p~~~~~l~ 189 (208)
T 2o6s_A 182 RNSAGSVA 189 (208)
T ss_dssp BCTTSSBC
T ss_pred eccCcccc
Confidence 66555544
No 120
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.84 E-value=3.6e-21 Score=193.70 Aligned_cols=152 Identities=25% Similarity=0.242 Sum_probs=91.0
Q ss_pred cEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCC
Q 047196 383 ENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGN 462 (827)
Q Consensus 383 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 462 (827)
+.++.+++.++. +|..+ .++|++|++++|++++..+..|..+++|++|++++|++++..+..|..+++|++|++++|
T Consensus 10 ~~v~c~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n 86 (208)
T 2o6s_A 10 TTVECYSQGRTS-VPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTN 86 (208)
T ss_dssp TEEECCSSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEecCCCccC-CCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCC
Confidence 456666666663 34333 346777777777777666666667777777777777776555555666666666666666
Q ss_pred cccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceee
Q 047196 463 KFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFS 537 (827)
Q Consensus 463 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 537 (827)
++++..+..+..+++|++|++++|.+++..+..|..+++|+.|++++|.+++..+..+..++.|+.|++++|.+.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~ 161 (208)
T 2o6s_A 87 QLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWD 161 (208)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBC
T ss_pred cCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCee
Confidence 666544445566666666666666666555555555555555555555555444434444444444444444443
No 121
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.84 E-value=6.6e-21 Score=204.42 Aligned_cols=150 Identities=23% Similarity=0.369 Sum_probs=119.6
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeecc
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHS 753 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~~ 753 (827)
++|...++||+|+||.||+|+.. +|+.||||++........+.|.+|++++++++|||||++++++.++...++...+.
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~ 89 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYI 89 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEec
Confidence 57888899999999999999874 68999999987666667788999999999999999999999998876554432222
Q ss_pred -----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc-
Q 047196 754 -----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI- 811 (827)
Q Consensus 754 -----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~- 811 (827)
....+.+.++..++.++++||+||| +.+|+||||||+||+ |||+++.........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (310)
T 3s95_A 90 KGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLH---SMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPE 166 (310)
T ss_dssp TTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-------
T ss_pred CCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccc
Confidence 1345778889999999999999996 567999999999998 999998764332211
Q ss_pred ------------cccceecccccccccC
Q 047196 812 ------------QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ------------~~~~~gt~~Y~APE~l 827 (827)
....+||++|+|||++
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 194 (310)
T 3s95_A 167 GLRSLKKPDRKKRYTVVGNPYWMAPEMI 194 (310)
T ss_dssp -------------CCCCSCGGGCCHHHH
T ss_pred ccccccccccccccccCCCcceeCHHHh
Confidence 0134589999999963
No 122
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.84 E-value=7.6e-21 Score=205.35 Aligned_cols=149 Identities=26% Similarity=0.338 Sum_probs=120.3
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+++.+|+++++.++|||||++++++......++..
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 46789999999999999999986 57999999999653 3345677899999999999999999999998776555433
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+.. ...++......++.++++|++||| +.+|+||||||+||+ |||+++.......
T Consensus 94 e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~- 169 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH---QKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK- 169 (328)
T ss_dssp CCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCG-
T ss_pred ECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCc-
Confidence 3322 134667778899999999999996 568999999999998 9999987654332
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
....+||++|+|||++
T Consensus 170 -~~~~~gt~~y~aPE~~ 185 (328)
T 3fe3_A 170 -LDAFCGAPPYAAPELF 185 (328)
T ss_dssp -GGTTSSSGGGCCHHHH
T ss_pred -cccccCCcceeCcccc
Confidence 2345699999999963
No 123
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.84 E-value=2.5e-20 Score=203.49 Aligned_cols=204 Identities=16% Similarity=0.124 Sum_probs=132.9
Q ss_pred CcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCcccc-
Q 047196 86 CNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSS- 164 (827)
Q Consensus 86 C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~- 164 (827)
|.|..|.|+. ++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|||++|++.+.+|.
T Consensus 9 C~~~~v~C~~------------~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~ 73 (350)
T 4ay9_X 9 CSNRVFLCQE------------SKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 73 (350)
T ss_dssp EETTEEEEES------------TTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTT
T ss_pred eeCCEEEecC------------CCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChh
Confidence 6777777763 3344 456555 36789999999999865556789999999999999998765543
Q ss_pred ccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCcc
Q 047196 165 VTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTI 244 (827)
Q Consensus 165 ~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~ 244 (827)
.|.+++++ ++.+.++.|+++...|..|.++++|++|++++|++++..+..+....+
T Consensus 74 ~f~~L~~l------------------------~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~ 129 (350)
T 4ay9_X 74 VFSNLPKL------------------------HEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 129 (350)
T ss_dssp SBCSCTTC------------------------CEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSS
T ss_pred Hhhcchhh------------------------hhhhcccCCcccccCchhhhhccccccccccccccccCCchhhcccch
Confidence 23333322 234556667777777777888888888888888887766666666777
Q ss_pred ccEEEccc-ccccccccccccCcC-CCcEEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEe
Q 047196 245 LRKISLRN-NKLRGEIPHEIGYLP-NLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLN 322 (827)
Q Consensus 245 L~~L~Ls~-N~l~~~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ 322 (827)
+..|++.+ |++....+..|..+. .+++|+|++|+++.+ |...+...+|+++++++++..+.+|...+..+++|++|+
T Consensus 130 l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i-~~~~f~~~~L~~l~l~~~n~l~~i~~~~f~~l~~L~~Ld 208 (350)
T 4ay9_X 130 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEI-HNSAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILD 208 (350)
T ss_dssp CEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEE-CTTSSTTEEEEEEECTTCTTCCCCCTTTTTTEECCSEEE
T ss_pred hhhhhhccccccccccccchhhcchhhhhhccccccccCC-ChhhccccchhHHhhccCCcccCCCHHHhccCcccchhh
Confidence 77788765 456544445566654 577888888888754 333444455666666554444445444433444555555
Q ss_pred CcCCccc
Q 047196 323 LGLNRFS 329 (827)
Q Consensus 323 L~~N~l~ 329 (827)
|++|+++
T Consensus 209 Ls~N~l~ 215 (350)
T 4ay9_X 209 ISRTRIH 215 (350)
T ss_dssp CTTSCCC
T ss_pred cCCCCcC
Confidence 5555544
No 124
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.84 E-value=2.1e-21 Score=215.83 Aligned_cols=156 Identities=21% Similarity=0.277 Sum_probs=122.7
Q ss_pred HHHHHhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC
Q 047196 669 DLFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNED 744 (827)
Q Consensus 669 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~ 744 (827)
+.....++|+..++||+|+||+||+|+.+ +|+.||||++.+.. ....+.+.+|++++.+++|||||++++++.+.+
T Consensus 55 ~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~ 134 (412)
T 2vd5_A 55 EVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDEN 134 (412)
T ss_dssp HHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSS
T ss_pred hccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCC
Confidence 33445678999999999999999999875 69999999996532 122345889999999999999999999998877
Q ss_pred ceeeeeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eeccccc
Q 047196 745 FKALDCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRL 803 (827)
Q Consensus 745 ~~~l~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~ 803 (827)
..++...+.. ...+.+.....++.+++.||+||| +.+|+||||||+||| |||+|+.
T Consensus 135 ~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~giiHrDLKp~NILld~~g~vkL~DFGla~~ 211 (412)
T 2vd5_A 135 YLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH---RLGYVHRDIKPDNILLDRCGHIRLADFGSCLK 211 (412)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEE
T ss_pred EEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecccCHHHeeecCCCCEEEeechhhee
Confidence 6554333221 135677777889999999999996 568999999999998 9999987
Q ss_pred ccCCCccccccceecccccccccC
Q 047196 804 LTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 804 ~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
...+........+||++|||||++
T Consensus 212 ~~~~~~~~~~~~~Gt~~Y~APE~l 235 (412)
T 2vd5_A 212 LRADGTVRSLVAVGTPDYLSPEIL 235 (412)
T ss_dssp CCTTSCEECSSCCSCGGGCCHHHH
T ss_pred ccCCCccccceeccccCcCCHHHH
Confidence 765443222335699999999974
No 125
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.84 E-value=6.3e-21 Score=219.30 Aligned_cols=166 Identities=27% Similarity=0.305 Sum_probs=124.2
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|++|+|++|+|+ .+| ..+++|+.|+|++|++++ +|. +.+ +|+.|+|++|++++ +|. .+++|+.|+|+
T Consensus 81 ~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls 148 (571)
T 3cvr_A 81 QITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINAD 148 (571)
T ss_dssp TCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECC
T ss_pred CCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCC
Confidence 6788888888887 566 446788888888888886 555 554 78888888888876 565 56778888888
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccC-------ceEEccc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVV-------IGINLSR 533 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L-------~~L~Ls~ 533 (827)
+|++++ +|. .+++|++|+|++|.+++ +|. +. ++|+.|||++|+|+ .+|. +.. .| +.|+|++
T Consensus 149 ~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~--~~L~~L~Ls~N~L~-~lp~-~~~--~L~~~~~~L~~L~Ls~ 216 (571)
T 3cvr_A 149 NNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LP--ESLEALDVSTNLLE-SLPA-VPV--RNHHSEETEIFFRCRE 216 (571)
T ss_dssp SSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CC--TTCCEEECCSSCCS-SCCC-CC----------CCEEEECCS
T ss_pred CCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hh--CCCCEEECcCCCCC-chhh-HHH--hhhcccccceEEecCC
Confidence 888875 665 46778888888888877 555 54 78888888888887 5555 544 66 8888888
Q ss_pred ceeeecccccccCCCCCCEEECCCCcceeecCCCCcCC
Q 047196 534 NNFSGDIPSTIGDLKDLQNISLACNGLEGLIPESFGYL 571 (827)
Q Consensus 534 N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~L 571 (827)
|+|+ .+|..+..+++|+.|+|++|.+++.+|..+..+
T Consensus 217 N~l~-~lp~~l~~l~~L~~L~L~~N~l~~~~p~~l~~l 253 (571)
T 3cvr_A 217 NRIT-HIPENILSLDPTCTIILEDNPLSSRIRESLSQQ 253 (571)
T ss_dssp SCCC-CCCGGGGGSCTTEEEECCSSSCCHHHHHHHHHH
T ss_pred Ccce-ecCHHHhcCCCCCEEEeeCCcCCCcCHHHHHHh
Confidence 8888 578888888888888888888888888766543
No 126
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.84 E-value=6.8e-21 Score=204.39 Aligned_cols=150 Identities=27% Similarity=0.392 Sum_probs=117.4
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--e
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--D 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~ 749 (827)
.++|+..+.||+|+||.||+|+..+|+.||||++.... ....+.+.+|++++++++|||||++++++..+...++ +
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 36788999999999999999998889999999986542 2234678999999999999999999999987765444 3
Q ss_pred eecc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 750 CLHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 750 ~l~~--------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
++.. ....+.+.....++.++++||+||| +.+|+||||||+||+ |||+|+........
T Consensus 100 ~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~- 175 (311)
T 3niz_A 100 FMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRS- 175 (311)
T ss_dssp CCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC--
T ss_pred CCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCchHhEEECCCCCEEEccCcCceecCCCccc-
Confidence 2221 1234778888899999999999996 568999999999998 99999876433221
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
....+||++|+|||++
T Consensus 176 ~~~~~~t~~y~aPE~~ 191 (311)
T 3niz_A 176 YTHEVVTLWYRAPDVL 191 (311)
T ss_dssp --CCCCCCTTCCHHHH
T ss_pred ccCCcccCCcCCHHHh
Confidence 2334589999999963
No 127
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.84 E-value=5.2e-21 Score=207.94 Aligned_cols=151 Identities=25% Similarity=0.359 Sum_probs=113.3
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l 751 (827)
.++|+..+.||+|+||+||+|+. .+|+.||||++.... ....+.+.+|++++++++|||||++++++...+..++...
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46788899999999999999986 579999999986543 2334578999999999999999999999988775554333
Q ss_pred ccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 752 HST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 752 ~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
+.. ...+++.+...++.+++.|++||| +.+|+||||||+||+ |||+|+.........
T Consensus 89 ~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~ 165 (347)
T 3zgw_A 89 YCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVH---SQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYH 165 (347)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBC--------
T ss_pred CCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCCcc
Confidence 322 234677788899999999999996 568999999999998 999998765433322
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
....+||+.|+|||++
T Consensus 166 ~~~~~gt~~y~aPE~~ 181 (347)
T 3zgw_A 166 LQTCCGSLAYAAPELI 181 (347)
T ss_dssp ------CGGGCCHHHH
T ss_pred ccccCCccCccCHHHH
Confidence 3345699999999963
No 128
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.84 E-value=4.5e-21 Score=212.99 Aligned_cols=156 Identities=22% Similarity=0.241 Sum_probs=122.1
Q ss_pred HHHHHhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCC
Q 047196 669 DLFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNED 744 (827)
Q Consensus 669 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~ 744 (827)
++....++|+..++||+|+||+||+|+.+ +|+.||||++..... ...+.+.+|+++++.++|||||++++++.++.
T Consensus 63 ~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~ 142 (410)
T 3v8s_A 63 DLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 142 (410)
T ss_dssp HHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECC
Confidence 34445678999999999999999999875 589999999865321 12345889999999999999999999998877
Q ss_pred ceeeeeeccC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eeccccccc
Q 047196 745 FKALDCLHST---------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLT 805 (827)
Q Consensus 745 ~~~l~~l~~~---------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~ 805 (827)
..++...+.. ...+.+.....++.+++.||+||| +.+|+||||||+||| |||+|+...
T Consensus 143 ~~~lV~E~~~gg~L~~~l~~~~~~e~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~ 219 (410)
T 3v8s_A 143 YLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIH---SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMN 219 (410)
T ss_dssp EEEEEECCCTTEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC
T ss_pred EEEEEEeCCCCCcHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCCHHHeeECCCCCEEEeccceeEeec
Confidence 6554333322 134566777889999999999996 568999999999998 999998775
Q ss_pred CCCccccccceecccccccccC
Q 047196 806 GDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 806 ~~~~~~~~~~~gt~~Y~APE~l 827 (827)
..........+||+.|||||++
T Consensus 220 ~~~~~~~~~~~gt~~Y~APE~l 241 (410)
T 3v8s_A 220 KEGMVRCDTAVGTPDYISPEVL 241 (410)
T ss_dssp TTSEEECCSCCSCGGGCCHHHH
T ss_pred cCCcccccCCcCCccccCHHHh
Confidence 5433223345699999999974
No 129
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.83 E-value=1.2e-20 Score=201.08 Aligned_cols=150 Identities=27% Similarity=0.325 Sum_probs=120.2
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
.++|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|+.++++++|||||++++++..++..++...+
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 98 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEEC
Confidence 35788899999999999999985 56899999998755444456789999999999999999999999877755543333
Q ss_pred cCC---------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccccc
Q 047196 753 STN---------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQT 813 (827)
Q Consensus 753 ~~~---------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~~ 813 (827)
... ..+++.+...++.++++||+||| +.+|+||||||+||+ |||+++........ ..
T Consensus 99 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~ 174 (297)
T 3fxz_A 99 LAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK-RS 174 (297)
T ss_dssp CTTCBHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCC-BC
T ss_pred CCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccc-cC
Confidence 222 23667778899999999999996 568999999999998 99999876544332 23
Q ss_pred cceecccccccccC
Q 047196 814 ETLVTIGYMAPGLL 827 (827)
Q Consensus 814 ~~~gt~~Y~APE~l 827 (827)
..+||+.|+|||++
T Consensus 175 ~~~gt~~y~aPE~~ 188 (297)
T 3fxz_A 175 TMVGTPYWMAPEVV 188 (297)
T ss_dssp CCCSCGGGCCHHHH
T ss_pred CccCCcCccChhhh
Confidence 34699999999963
No 130
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.83 E-value=2.6e-20 Score=199.38 Aligned_cols=162 Identities=28% Similarity=0.437 Sum_probs=129.0
Q ss_pred cccccchhHHHHHhhccccc------ceEecCCceEEEEEEecCCcEEEEEEEccc----chHHHHHHHHHHHHHHhcCC
Q 047196 661 TLRRFSYQDLFRATEKFSKE------NLIGVGSFGSVYKGRLHDGIEVAIKVFHQN----CAMALKSFEAECEVMKNIRH 730 (827)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~------~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~----~~~~~~~~~~Ei~~l~~l~H 730 (827)
..+.+++.++..++.+|... +.||+|+||.||+|+. +++.||||++... .....+.+.+|++++++++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34678999999999999888 8999999999999987 5789999998643 23345789999999999999
Q ss_pred CCceEEEeeeecCCceeeeeecc-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-
Q 047196 731 RNHVKRISSCSNEDFKALDCLHS-------------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF- 796 (827)
Q Consensus 731 ~niv~~~~~~~~~~~~~l~~l~~-------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl- 796 (827)
|||+++++++...+..++...+. ....+++..+..++.++++||+||| +.+|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nili 166 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLH---ENHHIHRDIKSANILL 166 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEE
Confidence 99999999998766444322221 1234778888999999999999996 568999999999998
Q ss_pred ---------eecccccccCCCccc-cccceeccccccccc
Q 047196 797 ---------DFGIGRLLTGDRSMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 797 ---------DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~ 826 (827)
|||+++......... .....||++|+|||+
T Consensus 167 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~g~~~y~aPE~ 206 (307)
T 2nru_A 167 DEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEA 206 (307)
T ss_dssp CTTCCEEECCCTTCEECCSCSSCEECSSCCSCGGGCCHHH
T ss_pred cCCCcEEEeecccccccccccccccccccCCCcCcCChHH
Confidence 999998765433221 222458999999996
No 131
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.83 E-value=1.6e-20 Score=203.40 Aligned_cols=149 Identities=26% Similarity=0.296 Sum_probs=118.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|+..+.||+|+||+||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+..++..
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 57889999999999999999865 68999999996532 223467889999999999999999999998877655433
Q ss_pred eccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+... ..++......++.+++.||+||| +.+|+||||||+||+ |||+++........
T Consensus 85 E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~ 161 (337)
T 1o6l_A 85 EYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGAT 161 (337)
T ss_dssp ECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCC
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCc
Confidence 33222 34566777889999999999996 568999999999998 99999864333222
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
....+||+.|||||++
T Consensus 162 -~~~~~gt~~y~aPE~~ 177 (337)
T 1o6l_A 162 -MKTFCGTPEYLAPEVL 177 (337)
T ss_dssp -BCCCEECGGGCCGGGG
T ss_pred -ccccccChhhCChhhh
Confidence 2335699999999974
No 132
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.83 E-value=5.3e-21 Score=205.27 Aligned_cols=148 Identities=28% Similarity=0.310 Sum_probs=113.8
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|+..++||+|+||+||+|+.. +|+.||||++... ......++.+|+..+.++ +|+|+|+++++|.+....++..
T Consensus 57 ~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~ 136 (311)
T 3p1a_A 57 QSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQT 136 (311)
T ss_dssp HHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEE
Confidence 57999999999999999999875 7999999998643 233344566677666665 8999999999998877655433
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+.. ...+++..+..++.+++.||+||| +.+|+||||||+||| |||+++.......
T Consensus 137 e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~- 212 (311)
T 3p1a_A 137 ELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA- 212 (311)
T ss_dssp ECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-----
T ss_pred eccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCC-
Confidence 3221 235788889999999999999996 467999999999998 9999887643322
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
.....||++|+|||++
T Consensus 213 -~~~~~gt~~y~aPE~~ 228 (311)
T 3p1a_A 213 -GEVQEGDPRYMAPELL 228 (311)
T ss_dssp ---CCCCCGGGCCGGGG
T ss_pred -CcccCCCccccCHhHh
Confidence 2334589999999974
No 133
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.83 E-value=5.5e-20 Score=200.74 Aligned_cols=106 Identities=17% Similarity=0.194 Sum_probs=62.6
Q ss_pred cEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhhhcCCCccEEEecCC
Q 047196 222 QLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAIFNMSTVKKIYLLDN 301 (827)
Q Consensus 222 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n 301 (827)
+.++.++++++ .+|..+ .+++++|+|++|+|+...+.+|.++++|++|+|++|++.+.+|
T Consensus 12 ~~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~----------------- 71 (350)
T 4ay9_X 12 RVFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIE----------------- 71 (350)
T ss_dssp TEEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEEC-----------------
T ss_pred CEEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccC-----------------
Confidence 35566666665 445444 2456666666666664433456666666666666666554443
Q ss_pred ccccccChhhhcCCCCccE-EeCcCCccccccCccccCCCCCcEEEcCCCccee
Q 047196 302 SLLGSFSLGIDLSLPNVER-LNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSG 354 (827)
Q Consensus 302 ~l~~~~~~~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 354 (827)
...+..++++++ +.++.|+++...|..|..+++|++|++++|++++
T Consensus 72 -------~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~ 118 (350)
T 4ay9_X 72 -------ADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKH 118 (350)
T ss_dssp -------TTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSS
T ss_pred -------hhHhhcchhhhhhhcccCCcccccCchhhhhcccccccccccccccc
Confidence 322234455443 4556677777667777777777777777776654
No 134
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.83 E-value=5.3e-22 Score=236.61 Aligned_cols=258 Identities=18% Similarity=0.224 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCcCCCCCCCCCCCCcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCC
Q 047196 52 NITTDQQALLALKAHISYDPTNLLAQNSTSNTSVCNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSH 131 (827)
Q Consensus 52 ~~~~~~~aLl~~k~~~~~~~~~~l~~w~~~~~~~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~ 131 (827)
..+.++++|+++...........-..|....+..+.|.++.++. .+++.|+|..+++... +.. .|+.++|+.
T Consensus 129 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~--~~~~~l~L~~n~~~~~-~~~-----~l~~l~Ls~ 200 (727)
T 4b8c_D 129 LVDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVST--PLTPKIELFANGKDEA-NQA-----LLQHKKLSQ 200 (727)
T ss_dssp ---CCCHHHHHHHHHHHHHHTTC---------------------------------------------------------
T ss_pred ccccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceecC--CccceEEeeCCCCCcc-hhh-----HhhcCccCc
Confidence 45678899999988763333333345654455678899998875 6899999999988763 332 334455555
Q ss_pred CCCCc---------cCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEe
Q 047196 132 NKLSG---------DIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFL 202 (827)
Q Consensus 132 N~l~g---------~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~L 202 (827)
|.|.+ ..|..+..+++|++|||++|.+. .+|..+++++ +|++|+|
T Consensus 201 ~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~-------------------------~L~~L~L 254 (727)
T 4b8c_D 201 YSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYD-------------------------FLTRLYL 254 (727)
T ss_dssp ---------------------CCCCCCEEECTTSCCS-CCCGGGGGCC-------------------------SCSCCBC
T ss_pred ccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCC-------------------------CCCEEEe
Confidence 54442 34556666777777777777765 3444444444 4555555
Q ss_pred ecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCccc
Q 047196 203 AKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGV 282 (827)
Q Consensus 203 s~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~ 282 (827)
++|.++ .+|..|+++++|++|+|++|.|+ .+|..|++|++|++|+|++|.|+ .+|..|+.+++|++|+|++|.+++.
T Consensus 255 s~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~ 331 (727)
T 4b8c_D 255 NGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQ 331 (727)
T ss_dssp TTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSH
T ss_pred eCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCC
Confidence 555554 45555555555555555555555 44555555555666666665554 4555555566666666666666555
Q ss_pred CchhhhcCCC-ccEEEecCCccccccChhhhcCCCCccEEeCcCC--------ccccccCccccCCCCCcEEEcCCCcce
Q 047196 283 VPAAIFNMST-VKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLN--------RFSGTIPSFITNASKLVYLDMGTNSFS 353 (827)
Q Consensus 283 ~p~~~~~l~~-L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N--------~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 353 (827)
+|..+..+.. +..+++++|.+.|.+|. .|+.|+++.| .+.+..+..+.++.++....+++|-+.
T Consensus 332 ~p~~~~~~~~~~~~l~l~~N~l~~~~p~-------~l~~l~l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~ 404 (727)
T 4b8c_D 332 FLKILTEKSVTGLIFYLRDNRPEIPLPH-------ERRFIEINTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLC 404 (727)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCCC-------C-----------------------------------------CCC
T ss_pred ChHHHhhcchhhhHHhhccCcccCcCcc-------ccceeEeecccccccccCCccccccchhhcccccceeeeeccccc
Confidence 5555543321 12244555555544442 2334444444 233333344445555555566666554
No 135
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.83 E-value=2e-20 Score=205.14 Aligned_cols=150 Identities=24% Similarity=0.404 Sum_probs=120.2
Q ss_pred HhhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
..++|...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++|||||++++++.+.+..++.
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3467999999999999999999865 6899999999653 234457799999999999999999999999887765543
Q ss_pred eeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccC
Q 047196 750 CLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTG 806 (827)
Q Consensus 750 ~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~ 806 (827)
..+.. ...+++.+...++.++++||+||| +.+|+||||||+||+ |||+++....
T Consensus 107 ~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~ 183 (362)
T 2bdw_A 107 FDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 183 (362)
T ss_dssp ECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTT
T ss_pred EecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecC
Confidence 33221 234677888899999999999996 568999999999998 9999987653
Q ss_pred CCccccccceecccccccccC
Q 047196 807 DRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~l 827 (827)
... ....+||++|+|||++
T Consensus 184 ~~~--~~~~~gt~~y~aPE~~ 202 (362)
T 2bdw_A 184 SEA--WHGFAGTPGYLSPEVL 202 (362)
T ss_dssp CCS--CCCSCSCTTTCCHHHH
T ss_pred Ccc--cccCCCCccccCHHHH
Confidence 322 2234699999999973
No 136
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.83 E-value=2.1e-20 Score=198.62 Aligned_cols=149 Identities=26% Similarity=0.359 Sum_probs=119.1
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l 751 (827)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++..+...++...
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46888899999999999999875 68999999996432 3345678899999999999999999999988775544322
Q ss_pred cc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 752 HS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 752 ~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
+. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+|+........
T Consensus 82 ~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH---~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 157 (292)
T 3o0g_A 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRC- 157 (292)
T ss_dssp CCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSC-
T ss_pred cCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEeecccceecCCcccc-
Confidence 21 1346778888999999999999996 568999999999998 99999876533222
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
.....||+.|+|||++
T Consensus 158 ~~~~~~t~~y~aPE~~ 173 (292)
T 3o0g_A 158 YSAEVVTLWYRPPDVL 173 (292)
T ss_dssp CCSCCSCGGGCCHHHH
T ss_pred ccCCccccCCcChHHH
Confidence 2334589999999963
No 137
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.83 E-value=1.9e-20 Score=206.01 Aligned_cols=150 Identities=26% Similarity=0.443 Sum_probs=116.2
Q ss_pred hcccccceEecCCceEEEEEEec--------CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCC
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH--------DGIEVAIKVFHQNC-AMALKSFEAECEVMKNI-RHRNHVKRISSCSNED 744 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~ 744 (827)
++|...+.||+|+||.||+|+.. ++..||||++.... ....+++.+|+++++++ +|||||+++++|...+
T Consensus 81 ~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 160 (370)
T 2psq_A 81 DKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 160 (370)
T ss_dssp GGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSS
T ss_pred HHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCC
Confidence 57888899999999999999852 35679999997543 34567899999999999 8999999999998766
Q ss_pred ceeeeeeccCC--------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--
Q 047196 745 FKALDCLHSTN--------------------------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-- 796 (827)
Q Consensus 745 ~~~l~~l~~~~--------------------------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-- 796 (827)
..++...+... ..+.+.+...++.++++||+||| +.+|+||||||+||+
T Consensus 161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~ 237 (370)
T 2psq_A 161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLVT 237 (370)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEC
T ss_pred CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeccccchhhEEEC
Confidence 54442222111 23577788899999999999996 568999999999998
Q ss_pred --------eecccccccCCCccc-cccceecccccccccC
Q 047196 797 --------DFGIGRLLTGDRSMI-QTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 --------DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l 827 (827)
|||+|+......... .....+|+.|||||++
T Consensus 238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~ 277 (370)
T 2psq_A 238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 277 (370)
T ss_dssp TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHH
T ss_pred CCCCEEEccccCCcccCcccceecccCCCcccceECHhHh
Confidence 999998765433221 1223478999999963
No 138
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.82 E-value=1.8e-20 Score=204.67 Aligned_cols=149 Identities=20% Similarity=0.312 Sum_probs=117.4
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch-----HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA-----MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-----~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
+.|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++|||||++++++...+..++
T Consensus 24 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~l 103 (351)
T 3c0i_A 24 DVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYM 103 (351)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred cceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEE
Confidence 56888999999999999999864 689999999864321 135679999999999999999999999988775544
Q ss_pred eeeccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eeccc
Q 047196 749 DCLHSTN--------------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIG 801 (827)
Q Consensus 749 ~~l~~~~--------------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla 801 (827)
...+... ..+++.....++.++++||+||| +.+|+||||||+||+ |||++
T Consensus 104 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a 180 (351)
T 3c0i_A 104 VFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVA 180 (351)
T ss_dssp EEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECSSSTTCCEEECCCTTC
T ss_pred EEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChHHeEEecCCCCCcEEEecCcce
Confidence 3332221 13566777889999999999996 568999999999998 99999
Q ss_pred ccccCCCccccccceecccccccccC
Q 047196 802 RLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 802 ~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
+........ ....+||+.|+|||++
T Consensus 181 ~~~~~~~~~-~~~~~gt~~y~aPE~~ 205 (351)
T 3c0i_A 181 IQLGESGLV-AGGRVGTPHFMAPEVV 205 (351)
T ss_dssp EECCTTSCB-CCCCCSCGGGCCHHHH
T ss_pred eEecCCCee-ecCCcCCcCccCHHHH
Confidence 876543321 2335699999999973
No 139
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.82 E-value=2.3e-20 Score=201.90 Aligned_cols=151 Identities=26% Similarity=0.375 Sum_probs=112.1
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc------
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF------ 745 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~------ 745 (827)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.+...
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 467889999999999999999975 79999999997533 3355789999999999999999999998855321
Q ss_pred ---------------------------------------------------ee--eeeeccC-----------CCCCCHH
Q 047196 746 ---------------------------------------------------KA--LDCLHST-----------NCSLNIF 761 (827)
Q Consensus 746 ---------------------------------------------------~~--l~~l~~~-----------~~~l~~~ 761 (827)
.+ +++.... .....+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~ 164 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHG 164 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhH
Confidence 11 2222111 0123344
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc-----------cccccceeccc
Q 047196 762 DKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS-----------MIQTETLVTIG 820 (827)
Q Consensus 762 ~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~-----------~~~~~~~gt~~ 820 (827)
....++.|+++||+||| +.+|+||||||+||+ |||+++....... ......+||+.
T Consensus 165 ~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 241 (332)
T 3qd2_B 165 VCLHIFIQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKL 241 (332)
T ss_dssp HHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGG
T ss_pred HHHHHHHHHHHHHHHHH---hCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcC
Confidence 56789999999999996 568999999999998 9999987754321 11123458999
Q ss_pred ccccccC
Q 047196 821 YMAPGLL 827 (827)
Q Consensus 821 Y~APE~l 827 (827)
|+|||++
T Consensus 242 y~aPE~~ 248 (332)
T 3qd2_B 242 YMSPEQI 248 (332)
T ss_dssp GSCHHHH
T ss_pred ccChHHh
Confidence 9999963
No 140
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.82 E-value=2.8e-20 Score=204.79 Aligned_cols=148 Identities=25% Similarity=0.335 Sum_probs=118.8
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++......++..
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 57888999999999999999865 58999999986532 123467889999999999999999999998877554432
Q ss_pred ecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+. ....+++.....++.+++.||+||| +.+|+||||||+||+ |||+|+.......
T Consensus 95 e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~- 170 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQ---NQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ- 170 (384)
T ss_dssp CCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCC-
T ss_pred ecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCc-
Confidence 222 1235677788899999999999996 568999999999998 9999987654332
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
....+||++|+|||++
T Consensus 171 -~~~~~gt~~Y~aPE~~ 186 (384)
T 4fr4_A 171 -ITTMAGTKPYMAPEMF 186 (384)
T ss_dssp -BCCCCSCGGGCCGGGT
T ss_pred -eeccCCCccccCCeee
Confidence 2345699999999975
No 141
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.82 E-value=2.2e-20 Score=201.48 Aligned_cols=152 Identities=25% Similarity=0.302 Sum_probs=117.8
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc------ee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF------KA 747 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~------~~ 747 (827)
..+|+..++||+|+||.||+|+.. ++.||||++.... .....+++|+.++++++|||||++++++..... .+
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv 100 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD-KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLI 100 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG-HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc-hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEE
Confidence 357888999999999999999876 7899999996543 234456779999999999999999999977542 23
Q ss_pred eeeeccC-------CCCCCHHHHHHHHHHHHHHHHHHHhc-------CCCCeEEccCCCccee----------eeccccc
Q 047196 748 LDCLHST-------NCSLNIFDKLNIMIDVASALEYLHFS-------HSTPVIHCDLKPKNVF----------DFGIGRL 803 (827)
Q Consensus 748 l~~l~~~-------~~~l~~~~~~~i~~~ia~~L~~Lh~~-------h~~~iiHrDlK~~NIl----------DFGla~~ 803 (827)
+++.... ...+++.....++.++++||+|||.. |+++|+||||||+||+ |||+|+.
T Consensus 101 ~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~ 180 (322)
T 3soc_A 101 TAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALK 180 (322)
T ss_dssp EECCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEE
T ss_pred EecCCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccc
Confidence 3333221 13477888899999999999999643 3459999999999998 9999987
Q ss_pred ccCCCccc-cccceecccccccccC
Q 047196 804 LTGDRSMI-QTETLVTIGYMAPGLL 827 (827)
Q Consensus 804 ~~~~~~~~-~~~~~gt~~Y~APE~l 827 (827)
........ .....||+.|+|||++
T Consensus 181 ~~~~~~~~~~~~~~gt~~y~aPE~~ 205 (322)
T 3soc_A 181 FEAGKSAGDTHGQVGTRRYMAPEVL 205 (322)
T ss_dssp ECTTSCCCCCTTCCCCGGGCCHHHH
T ss_pred cccccCccccccCccCccccCHhhc
Confidence 75443322 2234589999999963
No 142
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.82 E-value=3e-20 Score=205.86 Aligned_cols=150 Identities=19% Similarity=0.322 Sum_probs=117.1
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcC--CCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIR--HRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~--H~niv~~~~~~~~~~~~~l~~ 750 (827)
+.|...+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++ |+|||++++++..++..++..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458889999999999999999878999999998643 3445678999999999997 499999999998877655433
Q ss_pred ecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------eecccccccCCCcc-c
Q 047196 751 LHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------DFGIGRLLTGDRSM-I 811 (827)
Q Consensus 751 l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------DFGla~~~~~~~~~-~ 811 (827)
... ....+++.++..++.++++||+||| +.+|+||||||+||| |||+|+.+...... .
T Consensus 136 E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~ 212 (390)
T 2zmd_A 136 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVV 212 (390)
T ss_dssp ECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCCGGGEEESSSCEEECCCSSSCCC--------
T ss_pred ecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCHHHEEEECCeEEEEecCccccccCCCcccc
Confidence 221 1235677788899999999999995 678999999999998 99999876543322 1
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
....+||++|||||++
T Consensus 213 ~~~~~gt~~y~aPE~~ 228 (390)
T 2zmd_A 213 KDSQVGAVNYMPPEAI 228 (390)
T ss_dssp -CCSCCCGGGCCHHHH
T ss_pred CCCCCcCCCccChHHh
Confidence 2335699999999973
No 143
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.82 E-value=4e-20 Score=197.08 Aligned_cols=149 Identities=27% Similarity=0.420 Sum_probs=113.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch--------------------------HHHHHHHHHHHHHHh
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA--------------------------MALKSFEAECEVMKN 727 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------------------------~~~~~~~~Ei~~l~~ 727 (827)
++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57888999999999999999864 689999999864321 113568999999999
Q ss_pred cCCCCceEEEeeeecC--Cceee--eeecc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee
Q 047196 728 IRHRNHVKRISSCSNE--DFKAL--DCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF 796 (827)
Q Consensus 728 l~H~niv~~~~~~~~~--~~~~l--~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl 796 (827)
++|||||++++++... ...++ ++... ....+++.+...++.++++||+||| +.+|+||||||+||+
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil 169 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQDLIKGIEYLH---YQKIIHRDIKPSNLL 169 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEE
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEE
Confidence 9999999999998763 33333 33221 1235678888999999999999996 568999999999998
Q ss_pred ----------eecccccccCCCccccccceecccccccccC
Q 047196 797 ----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ----------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++........ .....||+.|+|||++
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~~~~-~~~~~gt~~y~aPE~~ 209 (298)
T 2zv2_A 170 VGEDGHIKIADFGVSNEFKGSDAL-LSNTVGTPAFMAPESL 209 (298)
T ss_dssp ECTTSCEEECCCTTCEECSSSSCE-ECCCCSCGGGCCGGGC
T ss_pred ECCCCCEEEecCCCcccccccccc-ccCCcCCccccChhhh
Confidence 99999876543322 2334689999999974
No 144
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.82 E-value=1.9e-20 Score=202.24 Aligned_cols=150 Identities=25% Similarity=0.464 Sum_probs=115.0
Q ss_pred hcccccceEecCCceEEEEEEec----CCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee-
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH----DGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL- 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l- 748 (827)
++|...+.||+|+||.||+|+.. .+..||||++... .....+.|.+|++++++++|||||++++++......++
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 46788899999999999999874 3456999999764 34456789999999999999999999999987654443
Q ss_pred -eeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 -DCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 -~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+++.. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 129 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 205 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLS---DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDP 205 (325)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCSSCEECC---
T ss_pred eeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEECCCCCEEECCCCcccccccCc
Confidence 33321 2245778889999999999999996 568999999999998 999998775433
Q ss_pred ccc--cccceecccccccccC
Q 047196 809 SMI--QTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~--~~~~~gt~~Y~APE~l 827 (827)
... .....+|++|+|||++
T Consensus 206 ~~~~~~~~~~~t~~y~aPE~~ 226 (325)
T 3kul_A 206 DAAYTTTGGKIPIRWTAPEAI 226 (325)
T ss_dssp -CCEECC---CCGGGSCHHHH
T ss_pred cceeeccCCCCcccccCHhHh
Confidence 221 1222368899999963
No 145
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.82 E-value=1.5e-20 Score=212.82 Aligned_cols=149 Identities=24% Similarity=0.338 Sum_probs=112.7
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC------
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED------ 744 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~------ 744 (827)
.++|+..+.||+|+||+||+|+.. +|+.||||++... .....+++.+|+++++.++|||||++++++....
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 467889999999999999999864 6899999999754 3344578899999999999999999999986543
Q ss_pred --ceeeeeeccC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 745 --FKALDCLHST-----NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 745 --~~~l~~l~~~-----~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
+.+++++... ...+++.+...++.|+++||+||| +.+|+||||||+||| |||+|+.....
T Consensus 141 ~~~lv~E~~~~~l~~~~~~~l~~~~~~~~~~qil~aL~~lH---~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 217 (464)
T 3ttj_A 141 DVYLVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217 (464)
T ss_dssp EEEEEEECCSEEHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C
T ss_pred eEEEEEeCCCCCHHHHHhhcCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC
Confidence 2233333221 234777888899999999999996 568999999999998 99999876543
Q ss_pred CccccccceecccccccccC
Q 047196 808 RSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~l 827 (827)
.. .+..+||++|+|||++
T Consensus 218 ~~--~~~~~gt~~y~aPE~~ 235 (464)
T 3ttj_A 218 FM--MTPYVVTRYYRAPEVI 235 (464)
T ss_dssp CC--C----CCCTTCCHHHH
T ss_pred cc--cCCCcccccccCHHHH
Confidence 22 2345699999999974
No 146
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.82 E-value=9.5e-21 Score=200.89 Aligned_cols=149 Identities=28% Similarity=0.406 Sum_probs=115.6
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccch--HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCA--MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~--~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
++|+..+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++|||||++++++...+..++...+
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 46888899999999999999988899999999865432 2246788999999999999999999999877654442222
Q ss_pred c----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcccc
Q 047196 753 S----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQ 812 (827)
Q Consensus 753 ~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~ 812 (827)
. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++........ .
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~ 157 (288)
T 1ob3_A 82 LDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRK-Y 157 (288)
T ss_dssp CSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------
T ss_pred cCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccc-c
Confidence 1 2245778888899999999999996 568999999999998 99999876433221 2
Q ss_pred ccceecccccccccC
Q 047196 813 TETLVTIGYMAPGLL 827 (827)
Q Consensus 813 ~~~~gt~~Y~APE~l 827 (827)
....||+.|+|||++
T Consensus 158 ~~~~~t~~y~aPE~~ 172 (288)
T 1ob3_A 158 THEIVTLWYRAPDVL 172 (288)
T ss_dssp ----CCCTTCCHHHH
T ss_pred ccccccccccCchhe
Confidence 234589999999963
No 147
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.82 E-value=1.9e-20 Score=212.35 Aligned_cols=150 Identities=27% Similarity=0.392 Sum_probs=105.6
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-----c
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED-----F 745 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-----~ 745 (827)
.++|+..++||+|+||+||+|+.. +|+.||||++... .....+++.+|++++++++|||||++++++.... .
T Consensus 52 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~ 131 (458)
T 3rp9_A 52 PDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDE 131 (458)
T ss_dssp CTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred CCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCce
Confidence 367999999999999999999864 6899999998653 3345578999999999999999999999985432 1
Q ss_pred ee--eeeecc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 746 KA--LDCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 746 ~~--l~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
.+ +++... ....+++.....++.++++||+||| +.+|+||||||+||| |||+|+....
T Consensus 132 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~ 208 (458)
T 3rp9_A 132 LYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208 (458)
T ss_dssp EEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTS
T ss_pred EEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcCCCCCChhhEEECCCCCEeecccccchhccC
Confidence 22 222211 1235778888899999999999996 568999999999998 9999987643
Q ss_pred CCc--------------------------cccccceeccccccccc
Q 047196 807 DRS--------------------------MIQTETLVTIGYMAPGL 826 (827)
Q Consensus 807 ~~~--------------------------~~~~~~~gt~~Y~APE~ 826 (827)
... ...+..+||++|||||+
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 254 (458)
T 3rp9_A 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPEL 254 (458)
T ss_dssp CTTCCCCCC---------------------------CCCTTCCHHH
T ss_pred ccccccccccCccccccccccccccccccccccCCcccccccChHH
Confidence 211 01233468999999996
No 148
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.82 E-value=2.5e-20 Score=202.91 Aligned_cols=150 Identities=19% Similarity=0.329 Sum_probs=116.7
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCC--CCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRH--RNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H--~niv~~~~~~~~~~~~~l~~ 750 (827)
+.|+..+.||+|+||.||+|...+++.||||++... .....+.+.+|++++++++| +|||++++++......++..
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 568889999999999999999888999999998643 34455789999999999987 99999999998877555433
Q ss_pred ecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------eecccccccCCCcc-c
Q 047196 751 LHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------DFGIGRLLTGDRSM-I 811 (827)
Q Consensus 751 l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------DFGla~~~~~~~~~-~ 811 (827)
... ....+++.++..++.++++||+||| +.+|+||||||+||| |||+|+........ .
T Consensus 89 e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~ 165 (343)
T 3dbq_A 89 ECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVV 165 (343)
T ss_dssp CCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTEEEECCCSSSCCC--------
T ss_pred eCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCcceEEEECCcEEEeecccccccCccccccc
Confidence 221 1235678888999999999999996 568999999999998 99999877544322 1
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
....+||++|+|||++
T Consensus 166 ~~~~~gt~~y~aPE~~ 181 (343)
T 3dbq_A 166 KDSQVGTVNYMPPEAI 181 (343)
T ss_dssp ----CCCCSSCCHHHH
T ss_pred CCCCcCCcCcCCHHHH
Confidence 2334699999999973
No 149
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.82 E-value=2.7e-20 Score=197.99 Aligned_cols=149 Identities=26% Similarity=0.378 Sum_probs=113.6
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEccc---chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN---CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|+..+.||+|+||.||+|+.. +++.||||++... .....++|.+|++++++++|||||++++++...+..++..
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 56888999999999999999864 6899999998532 2345678999999999999999999999998877554433
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+.. ...+++.....++.++++||+||| +.+|+||||||+||+ |||+++........
T Consensus 91 e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT 167 (294)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC------
T ss_pred eCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc
Confidence 3222 134677888899999999999996 568999999999998 99999876543322
Q ss_pred ccccceeccccccccc
Q 047196 811 IQTETLVTIGYMAPGL 826 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~ 826 (827)
......||+.|+|||+
T Consensus 168 ~~~~~~gt~~y~aPE~ 183 (294)
T 4eqm_A 168 QTNHVLGTVQYFSPEQ 183 (294)
T ss_dssp -------CCSSCCHHH
T ss_pred ccCccccCccccCHhH
Confidence 2233458999999996
No 150
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.82 E-value=2.5e-20 Score=203.34 Aligned_cols=150 Identities=23% Similarity=0.272 Sum_probs=114.5
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l 748 (827)
.++|+..++||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|+++++.+ +|||||++++++...+..++
T Consensus 22 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 101 (353)
T 3txo_A 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFF 101 (353)
T ss_dssp -CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEE
T ss_pred hhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEE
Confidence 467999999999999999999865 68999999997542 22345688999999998 69999999999988776554
Q ss_pred eeeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 DCLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 ~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
...+... ..+++.....++.+++.||+||| +.+|+||||||+||| |||+|+......
T Consensus 102 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~ 178 (353)
T 3txo_A 102 VMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMFLH---DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG 178 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC--
T ss_pred EEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCCcccCCCHHHEEECCCCCEEEccccceeecccCC
Confidence 3333221 34677778889999999999996 568999999999998 999998643322
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
.. ....+||+.|||||++
T Consensus 179 ~~-~~~~~gt~~y~aPE~~ 196 (353)
T 3txo_A 179 VT-TATFCGTPDYIAPEIL 196 (353)
T ss_dssp --------CCGGGCCHHHH
T ss_pred cc-ccccCCCcCeEChhhc
Confidence 21 2335699999999973
No 151
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.82 E-value=2.7e-20 Score=205.60 Aligned_cols=150 Identities=23% Similarity=0.236 Sum_probs=116.9
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l 748 (827)
.++|+..++||+|+||+||+|+.+ +++.||||++.... ....+.+.+|..+++++ +|||||++++++...+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 367899999999999999999875 58899999997542 22345688999999887 89999999999988775554
Q ss_pred eeeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 DCLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 ~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
...+... ..+++.....++.+++.||+||| +.+|+||||||+||| |||+|+......
T Consensus 131 V~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 207 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG 207 (396)
T ss_dssp EEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC
Confidence 3333222 34677778889999999999996 568999999999998 999998643322
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
.. ....+||+.|||||++
T Consensus 208 ~~-~~~~~gt~~Y~aPE~l 225 (396)
T 4dc2_A 208 DT-TSTFCGTPNYIAPEIL 225 (396)
T ss_dssp CC-BCCCCBCGGGCCHHHH
T ss_pred Cc-cccccCCcccCCchhh
Confidence 22 2345699999999974
No 152
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.82 E-value=2.7e-20 Score=205.53 Aligned_cols=149 Identities=19% Similarity=0.331 Sum_probs=120.6
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
.+.|+..+.||+|+||.||+|+.. +|+.||+|++..........+.+|++++++++|||||++++++.+....++...+
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~ 129 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEF 129 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEEC
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEc
Confidence 357888999999999999999865 6899999999766555566899999999999999999999999877655443222
Q ss_pred c-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------eecccccccCCCc
Q 047196 753 S-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------DFGIGRLLTGDRS 809 (827)
Q Consensus 753 ~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------DFGla~~~~~~~~ 809 (827)
. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+|+.......
T Consensus 130 ~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~ 206 (387)
T 1kob_A 130 LSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMH---EHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI 206 (387)
T ss_dssp CCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC
T ss_pred CCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc
Confidence 1 1235678888999999999999996 568999999999998 9999987654332
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
. ....||++|+|||++
T Consensus 207 ~--~~~~gt~~y~aPE~~ 222 (387)
T 1kob_A 207 V--KVTTATAEFAAPEIV 222 (387)
T ss_dssp E--EEECSSGGGCCHHHH
T ss_pred e--eeeccCCCccCchhc
Confidence 1 234589999999973
No 153
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.82 E-value=1.5e-20 Score=206.76 Aligned_cols=146 Identities=23% Similarity=0.394 Sum_probs=112.7
Q ss_pred ccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeeccC-
Q 047196 677 FSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHST- 754 (827)
Q Consensus 677 ~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~~~- 754 (827)
+...+.||+|+||.||+|+. .+|+.||||++........+++.+|++++++++|||||++++++...+..++...+..
T Consensus 91 ~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~ 170 (373)
T 2x4f_A 91 VSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDG 170 (373)
T ss_dssp EEEEEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCC
Confidence 44467899999999999986 4689999999987665667789999999999999999999999988775554333221
Q ss_pred ----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------eecccccccCCCcccc
Q 047196 755 ----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------DFGIGRLLTGDRSMIQ 812 (827)
Q Consensus 755 ----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------DFGla~~~~~~~~~~~ 812 (827)
...+++.+...++.++++||+||| +.+|+||||||+||| |||+++....... .
T Consensus 171 ~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~--~ 245 (373)
T 2x4f_A 171 GELFDRIIDESYNLTELDTILFMKQICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK--L 245 (373)
T ss_dssp CEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB--C
T ss_pred CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc--c
Confidence 234677788899999999999996 568999999999997 9999987654332 1
Q ss_pred ccceecccccccccC
Q 047196 813 TETLVTIGYMAPGLL 827 (827)
Q Consensus 813 ~~~~gt~~Y~APE~l 827 (827)
...+||++|+|||++
T Consensus 246 ~~~~gt~~y~aPE~~ 260 (373)
T 2x4f_A 246 KVNFGTPEFLAPEVV 260 (373)
T ss_dssp CCCCSSCTTCCHHHH
T ss_pred ccccCCCcEeChhhc
Confidence 234599999999963
No 154
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.82 E-value=1.6e-20 Score=197.02 Aligned_cols=148 Identities=26% Similarity=0.408 Sum_probs=117.4
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--eeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--DCLH 752 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~~l~ 752 (827)
++|+..+.||+|+||.||+|+..+++.||||++..... ..+++.+|++++++++||||+++++++.+....++ ++..
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFME 88 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCT
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEeccccc-CHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCC
Confidence 56888899999999999999988888999999975432 24578999999999999999999999987765443 3322
Q ss_pred c---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccccc
Q 047196 753 S---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQT 813 (827)
Q Consensus 753 ~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~~ 813 (827)
. ....+++.....++.++++|++||| +.+|+||||||+||+ |||+++...........
T Consensus 89 ~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~ 165 (269)
T 4hcu_A 89 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 165 (269)
T ss_dssp TCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHH---hCCeecCCcchheEEEcCCCCEEecccccccccccccccccc
Confidence 1 1234678888899999999999996 567999999999998 99999876443222223
Q ss_pred cceeccccccccc
Q 047196 814 ETLVTIGYMAPGL 826 (827)
Q Consensus 814 ~~~gt~~Y~APE~ 826 (827)
...+|+.|+|||+
T Consensus 166 ~~~~~~~y~aPE~ 178 (269)
T 4hcu_A 166 GTKFPVKWASPEV 178 (269)
T ss_dssp STTCCGGGCCHHH
T ss_pred CcccccccCCHHH
Confidence 3347889999996
No 155
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.82 E-value=3.3e-20 Score=202.89 Aligned_cols=149 Identities=22% Similarity=0.356 Sum_probs=118.8
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchH------HHHHHHHHHHHHHhcCCCCceEEEeeeecCCce
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAM------ALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK 746 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~ 746 (827)
.+.|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++......
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 356888999999999999999865 6899999999754321 246789999999999999999999999887755
Q ss_pred eeeeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------------eecccc
Q 047196 747 ALDCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGR 802 (827)
Q Consensus 747 ~l~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------------DFGla~ 802 (827)
++...+.. ...+++.+...++.+++.||+||| +.+|+||||||+||+ |||+++
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~ 167 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeCCCCCccCEEEEecCCce
Confidence 54333221 235678888999999999999996 568999999999987 899998
Q ss_pred cccCCCccccccceecccccccccC
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
....... ....+||++|+|||++
T Consensus 168 ~~~~~~~--~~~~~gt~~y~aPE~~ 190 (361)
T 2yab_A 168 EIEDGVE--FKNIFGTPEFVAPEIV 190 (361)
T ss_dssp ECCTTCC--CCCCCSCGGGCCHHHH
T ss_pred EcCCCCc--cccCCCCccEECchHH
Confidence 7654322 2334699999999973
No 156
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.82 E-value=4.6e-20 Score=193.30 Aligned_cols=150 Identities=25% Similarity=0.385 Sum_probs=119.0
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeecc
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHS 753 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~~ 753 (827)
.++|+..+.||+|+||.||+|+.+++..||||++..... ..+++.+|++++++++||||+++++++......++...+.
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSM-SEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYI 85 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTB-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCCC-cHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEcc
Confidence 357888899999999999999988888999999975432 3467899999999999999999999998776544432222
Q ss_pred C-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcccc
Q 047196 754 T-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQ 812 (827)
Q Consensus 754 ~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~ 812 (827)
. ...+++.+...++.++++|++||| +.+|+||||||+||+ |||+++..........
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 162 (268)
T 3sxs_A 86 SNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSS 162 (268)
T ss_dssp TTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEEC
T ss_pred CCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcc
Confidence 1 124677888899999999999996 568999999999998 9999987655433322
Q ss_pred ccceecccccccccC
Q 047196 813 TETLVTIGYMAPGLL 827 (827)
Q Consensus 813 ~~~~gt~~Y~APE~l 827 (827)
....+|+.|+|||++
T Consensus 163 ~~~~~~~~y~aPE~~ 177 (268)
T 3sxs_A 163 VGTKFPVKWSAPEVF 177 (268)
T ss_dssp CSCCCCGGGCCHHHH
T ss_pred cCCCcCcccCCHHHH
Confidence 333467889999963
No 157
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.82 E-value=3.3e-20 Score=200.16 Aligned_cols=150 Identities=23% Similarity=0.333 Sum_probs=116.9
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch-HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA-MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|+++++.++|||||++++++.+++..++...+
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57889999999999999999865 789999999865432 2346789999999999999999999999887755442222
Q ss_pred c----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc-c
Q 047196 753 S----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM-I 811 (827)
Q Consensus 753 ~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~-~ 811 (827)
. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.+...... .
T Consensus 87 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 163 (323)
T 3tki_A 87 CSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERL 163 (323)
T ss_dssp CTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECC
T ss_pred CCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccc
Confidence 1 1235778889999999999999996 578999999999998 99999876433221 1
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
....+||+.|+|||++
T Consensus 164 ~~~~~gt~~y~aPE~~ 179 (323)
T 3tki_A 164 LNKMCGTLPYVAPELL 179 (323)
T ss_dssp BCSCCSCGGGSCHHHH
T ss_pred cCCCccCcCccCcHHh
Confidence 2334699999999973
No 158
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.82 E-value=5e-20 Score=206.93 Aligned_cols=151 Identities=25% Similarity=0.310 Sum_probs=118.8
Q ss_pred HhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
..++|+..+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++|||||++++++.+++..++.
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 356799999999999999999986 478999999986543 33456799999999999999999999999887765543
Q ss_pred eeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccC
Q 047196 750 CLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTG 806 (827)
Q Consensus 750 ~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~ 806 (827)
..+.. ...+++.+...++.++++|++||| +.+|+||||||+||+ |||+|+....
T Consensus 89 ~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~lH---~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~ 165 (444)
T 3soa_A 89 FDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCH---QMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEG 165 (444)
T ss_dssp ECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCT
T ss_pred EEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecC
Confidence 33222 234677788899999999999996 568999999999998 9999987654
Q ss_pred CCccccccceecccccccccC
Q 047196 807 DRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~l 827 (827)
.... ....+||++|||||++
T Consensus 166 ~~~~-~~~~~gt~~Y~APE~l 185 (444)
T 3soa_A 166 EQQA-WFGFAGTPGYLSPEVL 185 (444)
T ss_dssp TCCB-CCCSCSCGGGCCHHHH
T ss_pred CCce-eecccCCcccCCHHHh
Confidence 4322 2335699999999973
No 159
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.82 E-value=4e-20 Score=199.20 Aligned_cols=148 Identities=22% Similarity=0.279 Sum_probs=118.5
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
.++|...+.||+|+||.||+|+.. +|+.||+|++.... ...+.+.+|+++++.++|||||++++++.+.+..++...+
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 82 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG-TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEF 82 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT-HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc-ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEe
Confidence 357888999999999999999865 68999999987543 3446789999999999999999999999887655443222
Q ss_pred c-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------eecccccccCCCc
Q 047196 753 S-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------DFGIGRLLTGDRS 809 (827)
Q Consensus 753 ~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------DFGla~~~~~~~~ 809 (827)
. ....+++.+...++.++++|++||| +.+|+||||||+||+ |||+++.......
T Consensus 83 ~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~ 159 (321)
T 1tki_A 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH---SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN 159 (321)
T ss_dssp CCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE
T ss_pred CCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc
Confidence 1 1234778888999999999999996 568999999999998 9999987654332
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
.....||++|+|||++
T Consensus 160 --~~~~~gt~~y~aPE~~ 175 (321)
T 1tki_A 160 --FRLLFTAPEYYAPEVH 175 (321)
T ss_dssp --EEEEESCGGGSCHHHH
T ss_pred --cccccCChhhcCcHHh
Confidence 2234589999999963
No 160
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.81 E-value=1.4e-20 Score=207.23 Aligned_cols=150 Identities=25% Similarity=0.493 Sum_probs=106.9
Q ss_pred hcccccceEecCCceEEEEEEec----CCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee-
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH----DGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL- 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l- 748 (827)
.+|+..+.||+|+||.||+|+.. ++..||||++... .....++|.+|++++++++|||||++++++......++
T Consensus 45 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv 124 (373)
T 2qol_A 45 TNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIV 124 (373)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred hhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEE
Confidence 46888899999999999999864 5778999999754 34456789999999999999999999999987665444
Q ss_pred -eeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 -DCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 -~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+++.. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 125 ~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~ 201 (373)
T 2qol_A 125 TEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLS---DMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP 201 (373)
T ss_dssp EECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCcceEEEcCCCCEEECcCccccccccCC
Confidence 33321 1235778889999999999999996 568999999999998 999998775443
Q ss_pred ccccc--cceecccccccccC
Q 047196 809 SMIQT--ETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~--~~~gt~~Y~APE~l 827 (827)
..... ...+|++|+|||++
T Consensus 202 ~~~~~~~~~~~~~~y~aPE~~ 222 (373)
T 2qol_A 202 EAAYTTRGGKIPIRWTSPEAI 222 (373)
T ss_dssp ------------CTTSCHHHH
T ss_pred ccceeccCCCcCCCccChhhh
Confidence 22111 12257889999963
No 161
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.81 E-value=6.6e-20 Score=199.48 Aligned_cols=149 Identities=24% Similarity=0.238 Sum_probs=117.7
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEccc---chHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN---CAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l~ 749 (827)
++|+..+.||+|+||.||+|+.+ +|+.||||++... .....+.+.+|+++++++ +|||||++++++......++.
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 57888999999999999999875 6899999999753 233456788999999998 899999999999887655543
Q ss_pred eeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 750 CLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 750 ~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
..+... ..+++.....++.+++.||+||| +.+|+||||||+||+ |||+|+.......
T Consensus 89 ~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~ 165 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLH---ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD 165 (345)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTC
T ss_pred EeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEEeccccccccCCCC
Confidence 333221 34667778889999999999996 568999999999998 9999986432222
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
. ....+||+.|+|||++
T Consensus 166 ~-~~~~~gt~~y~aPE~~ 182 (345)
T 3a8x_A 166 T-TSTFCGTPNYIAPEIL 182 (345)
T ss_dssp C-BCCCCSCGGGCCHHHH
T ss_pred c-ccccCCCccccCcccc
Confidence 1 2335699999999973
No 162
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.81 E-value=3.6e-20 Score=200.50 Aligned_cols=148 Identities=22% Similarity=0.317 Sum_probs=118.2
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+++++.++|||||++++++..+...++..
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5788899999999999999986 5789999999864321 12357899999999999999999999998877554432
Q ss_pred eccC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 751 LHST---------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 751 l~~~---------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
.+.. ...+++.+...++.+++.|++||| +.+|+||||||+||+ |||+++.......
T Consensus 89 E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~-- 163 (336)
T 3h4j_B 89 EYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCH---RHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNF-- 163 (336)
T ss_dssp CCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBT--
T ss_pred ECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcc--
Confidence 2221 235677888899999999999996 457999999999998 9999987654322
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
....+||+.|+|||++
T Consensus 164 ~~~~~gt~~y~aPE~~ 179 (336)
T 3h4j_B 164 LKTSCGSPNYAAPEVI 179 (336)
T ss_dssp TCCCTTSTTTSCGGGS
T ss_pred cccccCCcCcCCHHHH
Confidence 2334699999999975
No 163
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.81 E-value=3.2e-20 Score=202.25 Aligned_cols=144 Identities=27% Similarity=0.365 Sum_probs=116.5
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL-- 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l-- 748 (827)
+.|...+.||+|+||.||+|+. .+|+.||||++.... ....+++.+|++++++++|||||++++++..++..++
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 4588889999999999999986 578999999986432 3345679999999999999999999999987765444
Q ss_pred eeecc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 749 DCLHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 749 ~~l~~--------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
++... ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.....
T Consensus 134 e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~--- 207 (348)
T 1u5q_A 134 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--- 207 (348)
T ss_dssp ECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB---
T ss_pred ecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC---
Confidence 32211 1345778888999999999999996 468999999999998 99999765432
Q ss_pred ccccceeccccccccc
Q 047196 811 IQTETLVTIGYMAPGL 826 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~ 826 (827)
...+||++|+|||+
T Consensus 208 --~~~~gt~~y~aPE~ 221 (348)
T 1u5q_A 208 --NSFVGTPYWMAPEV 221 (348)
T ss_dssp --CCCCSCGGGCCHHH
T ss_pred --CcccCCcceeCHhh
Confidence 23458999999996
No 164
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.81 E-value=1.3e-19 Score=185.23 Aligned_cols=162 Identities=22% Similarity=0.245 Sum_probs=114.8
Q ss_pred CCCCCCcccceecCCCCCcEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCC
Q 047196 81 SNTSVCNWIGITCNVNSHRVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSG 160 (827)
Q Consensus 81 ~~~~~C~W~gv~C~~~~~~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g 160 (827)
.+.+.|+|.+|.|+.. ++. .+|..+. ++|++|+|++|++++..|..|..+++|++|+|++|+|++
T Consensus 14 ~~~~~Cs~~~v~c~~~------------~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~ 78 (229)
T 3e6j_A 14 PSQCSCSGTTVDCRSK------------RHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGA 78 (229)
T ss_dssp CTTCEEETTEEECTTS------------CCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCEEeCCEeEccCC------------CcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCC
Confidence 3567899999999753 222 4454443 789999999999998889899999999999999999864
Q ss_pred ccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCc
Q 047196 161 SLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEIS 240 (827)
Q Consensus 161 ~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~ 240 (827)
..+..+.. +++|++|+|++|.+++..+..|..+++|++|+|++|+++ .+|..+.
T Consensus 79 i~~~~~~~-------------------------l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~ 132 (229)
T 3e6j_A 79 LPVGVFDS-------------------------LTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIE 132 (229)
T ss_dssp CCTTTTTT-------------------------CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGG
T ss_pred cChhhccc-------------------------CCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccc
Confidence 43333333 335555555555555555555667777777777777776 5666677
Q ss_pred CCccccEEEcccccccccccccccCcCCCcEEEeecccCcccC
Q 047196 241 NLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVV 283 (827)
Q Consensus 241 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 283 (827)
++++|++|+|++|++++..+..+..+++|++|+|++|.+++..
T Consensus 133 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c 175 (229)
T 3e6j_A 133 RLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCEC 175 (229)
T ss_dssp GCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTB
T ss_pred cCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccCCc
Confidence 7777777777777777655566777777777777777776544
No 165
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.81 E-value=6.8e-20 Score=196.35 Aligned_cols=151 Identities=29% Similarity=0.470 Sum_probs=108.2
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--e
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--D 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~ 749 (827)
.++|+..+.||+|+||.||+|+. +|+.||||++.... ....++|.+|++++++++|||||++++++......++ +
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 114 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTE 114 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEE
T ss_pred hhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEe
Confidence 45788889999999999999987 57899999986543 3445789999999999999999999999987664443 3
Q ss_pred eeccC--------CC---CCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 750 CLHST--------NC---SLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 750 ~l~~~--------~~---~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
++... .. .+++..+..++.++++||+|||. +.++|+||||||+||+ |||+++......
T Consensus 115 ~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~-~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~ 193 (309)
T 3p86_A 115 YLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHN-RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF 193 (309)
T ss_dssp CCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHT-SSSCCCCTTCCGGGEEECTTCCEEECCCC---------
T ss_pred cCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHc-CCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc
Confidence 33221 11 26777888999999999999963 2233999999999998 999998654332
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
. ......||+.|+|||++
T Consensus 194 ~-~~~~~~gt~~y~aPE~~ 211 (309)
T 3p86_A 194 L-SSKSAAGTPEWMAPEVL 211 (309)
T ss_dssp ---------CCTTSCHHHH
T ss_pred c-ccccCCCCccccChhhh
Confidence 2 12234589999999963
No 166
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.81 E-value=7.1e-20 Score=196.83 Aligned_cols=146 Identities=24% Similarity=0.294 Sum_probs=117.0
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|+..+.||+|+||+||+|+.. +|+.||||++..... ...+.+.+|+.+++.++|||||++++++.+....++..
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 57888999999999999999865 689999999965422 23467889999999999999999999998876555433
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+.. ...+++.....++.+++.||+||| +.+|+||||||+||+ |||+++......
T Consensus 86 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~-- 160 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVT-- 160 (318)
T ss_dssp CCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCB--
T ss_pred eCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChheEEEcCCCCEEEeecCcceecCCcc--
Confidence 3222 234667777889999999999995 678999999999998 999998754321
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
...+||+.|+|||++
T Consensus 161 --~~~~gt~~y~aPE~~ 175 (318)
T 1fot_A 161 --YTLCGTPDYIAPEVV 175 (318)
T ss_dssp --CCCCSCTTTCCHHHH
T ss_pred --ccccCCccccCHhHh
Confidence 234699999999963
No 167
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.81 E-value=1.9e-20 Score=199.20 Aligned_cols=150 Identities=27% Similarity=0.446 Sum_probs=113.9
Q ss_pred hcccccceEecCCceEEEEEEe-----cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC----c
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-----HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED----F 745 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~----~ 745 (827)
++|+..+.||+|+||.||+|++ .+|+.||||++........+.|.+|++++++++|||||++++++...+ +
T Consensus 10 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 89 (295)
T 3ugc_A 10 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 89 (295)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCE
T ss_pred HHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceE
Confidence 5788889999999999999984 258899999998766666788999999999999999999999986532 2
Q ss_pred eeeeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 746 KALDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 746 ~~l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
.+++++.. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++....
T Consensus 90 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~ 166 (295)
T 3ugc_A 90 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 166 (295)
T ss_dssp EEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCSCC----
T ss_pred EEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHhhEEEcCCCeEEEccCcccccccC
Confidence 33343322 1234778888999999999999996 568999999999998 9999987754
Q ss_pred CCccc--cccceecccccccccC
Q 047196 807 DRSMI--QTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~--~~~~~gt~~Y~APE~l 827 (827)
..... .....+|+.|+|||++
T Consensus 167 ~~~~~~~~~~~~~~~~y~aPE~~ 189 (295)
T 3ugc_A 167 DKEFFKVKEPGESPIFWYAPESL 189 (295)
T ss_dssp ---------CTTCGGGGCCHHHH
T ss_pred CcceeeeccCCCCccceeCcHHh
Confidence 33221 1223378889999963
No 168
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.81 E-value=8.1e-20 Score=197.39 Aligned_cols=149 Identities=23% Similarity=0.359 Sum_probs=118.3
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchH------HHHHHHHHHHHHHhcCCCCceEEEeeeecCCce
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAM------ALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK 746 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~------~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~ 746 (827)
.+.|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++......
T Consensus 10 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 89 (326)
T 2y0a_A 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDV 89 (326)
T ss_dssp HHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred ccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEE
Confidence 356888999999999999999865 6899999998653221 356799999999999999999999999887655
Q ss_pred eeeeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------------eecccc
Q 047196 747 ALDCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGR 802 (827)
Q Consensus 747 ~l~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------------DFGla~ 802 (827)
++...+.. ...+++.+...++.++++||+||| +.+|+||||||+||+ |||+++
T Consensus 90 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~ 166 (326)
T 2y0a_A 90 ILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAH 166 (326)
T ss_dssp EEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHH---HCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCe
Confidence 44332221 234677888999999999999996 568999999999997 899998
Q ss_pred cccCCCccccccceecccccccccC
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
....... .....||+.|+|||++
T Consensus 167 ~~~~~~~--~~~~~gt~~y~aPE~~ 189 (326)
T 2y0a_A 167 KIDFGNE--FKNIFGTPEFVAPEIV 189 (326)
T ss_dssp ECCTTSC--CCCCCSCTTTCCHHHH
T ss_pred ECCCCCc--cccccCCcCcCCceee
Confidence 7643322 1234599999999963
No 169
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.81 E-value=5.8e-20 Score=199.63 Aligned_cols=151 Identities=20% Similarity=0.270 Sum_probs=118.0
Q ss_pred HhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCcee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKA 747 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~ 747 (827)
..++|...++||+|+||.||+|+.+ +|+.||||++.... ....+.+.+|.++++++ +|||||++++++...+..+
T Consensus 15 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~ 94 (345)
T 1xjd_A 15 KIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLF 94 (345)
T ss_dssp -CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEE
T ss_pred ChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEE
Confidence 4578999999999999999999975 68999999997542 12345678899999987 9999999999998877655
Q ss_pred eeeeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 748 LDCLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 748 l~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
+...+... ..+++.....++.+++.||+||| +.+|+||||||+||+ |||+|+.....
T Consensus 95 lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~ 171 (345)
T 1xjd_A 95 FVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH---SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLG 171 (345)
T ss_dssp EEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCT
T ss_pred EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccC
Confidence 43333221 34677778889999999999996 568999999999998 99999865332
Q ss_pred CccccccceecccccccccC
Q 047196 808 RSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~l 827 (827)
... ....+||+.|+|||++
T Consensus 172 ~~~-~~~~~gt~~y~aPE~~ 190 (345)
T 1xjd_A 172 DAK-TNTFCGTPDYIAPEIL 190 (345)
T ss_dssp TCC-BCCCCSCGGGCCHHHH
T ss_pred CCc-ccCCCCCcccCChhhh
Confidence 221 2335699999999973
No 170
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.81 E-value=7.4e-20 Score=205.63 Aligned_cols=150 Identities=26% Similarity=0.368 Sum_probs=115.0
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-----c
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED-----F 745 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-----~ 745 (827)
.++|...+.||+|+||.||+|+.. +|+.||||++... .....+++.+|++++++++|+|||++++++.... .
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 467999999999999999999864 6889999999653 2344578999999999999999999999987653 1
Q ss_pred ee--eeeecc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 746 KA--LDCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 746 ~~--l~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
.+ +++... ....+++.....++.++++||+||| +.+|+||||||+||| |||+|+....
T Consensus 105 ~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~LH---~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 181 (432)
T 3n9x_A 105 LYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIH---ESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINS 181 (432)
T ss_dssp EEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--
T ss_pred EEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCCCCCCCHHHeEECCCCCEEEccCCCcccccc
Confidence 22 232211 1235788888999999999999996 568999999999998 9999987643
Q ss_pred CCcc---------------------ccccceeccccccccc
Q 047196 807 DRSM---------------------IQTETLVTIGYMAPGL 826 (827)
Q Consensus 807 ~~~~---------------------~~~~~~gt~~Y~APE~ 826 (827)
.... ..+..+||++|+|||+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~ 222 (432)
T 3n9x_A 182 EKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPEL 222 (432)
T ss_dssp -----------------------------CCCCCTTCCHHH
T ss_pred cccccccccccccccccccccchhccccCCCCCccccCHHH
Confidence 3211 1234568999999996
No 171
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.81 E-value=5.5e-20 Score=198.75 Aligned_cols=150 Identities=26% Similarity=0.330 Sum_probs=107.9
Q ss_pred hhcccccceEecCCceEEEEEEe----cCCcEEEEEEEcccc----hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL----HDGIEVAIKVFHQNC----AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF 745 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~ 745 (827)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++|||||++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 36788999999999999999986 468999999997542 2234568899999999999999999999988765
Q ss_pred eeeeeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eeccccccc
Q 047196 746 KALDCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLT 805 (827)
Q Consensus 746 ~~l~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~ 805 (827)
.++...+.. ...+.......++.+++.||+||| +.+|+||||||+||+ |||+++...
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH---~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~ 172 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH---QKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESI 172 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCTTTEEECTTSCEEECCCSCC----
T ss_pred EEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH---hCCEEcccCCHHHeEECCCCcEEEEeCCcccccc
Confidence 554333322 234566777889999999999996 568999999999998 999998654
Q ss_pred CCCccccccceecccccccccC
Q 047196 806 GDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 806 ~~~~~~~~~~~gt~~Y~APE~l 827 (827)
..... ....+||+.|+|||++
T Consensus 173 ~~~~~-~~~~~gt~~y~aPE~~ 193 (327)
T 3a62_A 173 HDGTV-THTFCGTIEYMAPEIL 193 (327)
T ss_dssp -------CTTSSCCTTSCHHHH
T ss_pred cCCcc-ccccCCCcCccCHhhC
Confidence 33221 2234589999999963
No 172
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.81 E-value=2.2e-20 Score=201.96 Aligned_cols=150 Identities=27% Similarity=0.449 Sum_probs=109.8
Q ss_pred hcccccceEecCCceEEEEEEec-CCc----EEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGI----EVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~----~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
++|+..++||+|+||.||+|++. +|+ .||+|++.... ....++|.+|++++++++|||||+++++|......++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~v 94 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSSEEEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEE
Confidence 56888899999999999999853 444 36888875432 3345789999999999999999999999987764332
Q ss_pred -eeec---------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 -DCLH---------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 -~~l~---------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+++. .....+.+.....++.++++||+||| +.+|+||||||+||+ |||+|+......
T Consensus 95 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~ 171 (327)
T 3poz_A 95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp EECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTC
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCChheEEECCCCCEEEccCcceeEccCCc
Confidence 2211 12345778888999999999999996 468999999999998 999998875443
Q ss_pred ccc-cccceecccccccccC
Q 047196 809 SMI-QTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~-~~~~~gt~~Y~APE~l 827 (827)
... .....||++|+|||++
T Consensus 172 ~~~~~~~~~~t~~y~aPE~~ 191 (327)
T 3poz_A 172 KEYHAEGGKVPIKWMALESI 191 (327)
T ss_dssp C-------CCCGGGSCHHHH
T ss_pred ccccccCCCccccccChHHh
Confidence 322 2223368899999963
No 173
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.81 E-value=2.9e-20 Score=204.33 Aligned_cols=150 Identities=23% Similarity=0.405 Sum_probs=116.2
Q ss_pred hcccccceEecCCceEEEEEEec------CCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCcee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH------DGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKA 747 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~ 747 (827)
++|...+.||+|+||+||+|++. +++.||||++... ......++.+|+.++++++|||||++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56888899999999999999843 4678999998654 3445567999999999999999999999998765444
Q ss_pred e--eeeccC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------e
Q 047196 748 L--DCLHST---------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------D 797 (827)
Q Consensus 748 l--~~l~~~---------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------D 797 (827)
+ +++... ...+.+.+...++.++++||+||| +.+|+||||||+||| |
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEEecCCCCceEEECC
Confidence 3 332210 134778888999999999999996 568999999999998 9
Q ss_pred ecccccccCCCcc-ccccceecccccccccC
Q 047196 798 FGIGRLLTGDRSM-IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 798 FGla~~~~~~~~~-~~~~~~gt~~Y~APE~l 827 (827)
||+|+........ ......||+.|+|||++
T Consensus 228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~ 258 (367)
T 3l9p_A 228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAF 258 (367)
T ss_dssp CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHH
T ss_pred CccccccccccccccCCCcCCcccEECHHHh
Confidence 9999865332221 12234479999999963
No 174
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.81 E-value=5.9e-20 Score=203.58 Aligned_cols=152 Identities=25% Similarity=0.421 Sum_probs=108.5
Q ss_pred HhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcC-CCCceEEEeeeecCC----
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIR-HRNHVKRISSCSNED---- 744 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~-H~niv~~~~~~~~~~---- 744 (827)
..++|+..+.||+|+||.||+|+. .+|+.||||++... .....+++.+|+.++++++ |||||++++++..++
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 456899999999999999999986 46899999998543 2345567889999999998 999999999987544
Q ss_pred ceeeeeecc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 745 FKALDCLHS------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 745 ~~~l~~l~~------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+.+++++.. ....+++.....++.++++||+||| +.+|+||||||+||| |||+|+.+....
T Consensus 87 ~lv~e~~~~~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~ 163 (388)
T 3oz6_A 87 YLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIR 163 (388)
T ss_dssp EEEEECCSEEHHHHHHHTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCC
T ss_pred EEEecccCcCHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccc
Confidence 222333321 1235677778889999999999996 568999999999998 999998763311
Q ss_pred --------------------ccccccceecccccccccC
Q 047196 809 --------------------SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 --------------------~~~~~~~~gt~~Y~APE~l 827 (827)
....+..+||++|+|||++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 202 (388)
T 3oz6_A 164 RVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEIL 202 (388)
T ss_dssp CCCCCGGGCCC---------------CCCGGGGCCHHHH
T ss_pred cccccccccccccccccccccccccCCcccCCcCCHHHh
Confidence 1112334699999999963
No 175
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.81 E-value=1.3e-19 Score=193.34 Aligned_cols=150 Identities=27% Similarity=0.444 Sum_probs=113.9
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHh--cCCCCceEEEeeeecCC------c
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKN--IRHRNHVKRISSCSNED------F 745 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~--l~H~niv~~~~~~~~~~------~ 745 (827)
.++|...+.||+|+||.||+|+. +|+.||||++.... .+.+.+|.+++.. ++|||||++++++.... +
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~ 82 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLW 82 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeE
Confidence 35788899999999999999987 58899999986542 3456677777777 79999999999875431 1
Q ss_pred eeeeeecc-------CCCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEccCCCccee----------eeccccc
Q 047196 746 KALDCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFS-----HSTPVIHCDLKPKNVF----------DFGIGRL 803 (827)
Q Consensus 746 ~~l~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~Lh~~-----h~~~iiHrDlK~~NIl----------DFGla~~ 803 (827)
.++++... ....+++.....++.++++||+|||.. ++++|+||||||+||+ |||+|+.
T Consensus 83 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 162 (301)
T 3q4u_A 83 LITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162 (301)
T ss_dssp EEECCCTTCBHHHHHTTCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred EehhhccCCCHHHHHhhcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence 22232221 124578888999999999999999832 3889999999999998 9999987
Q ss_pred ccCCCccc---cccceecccccccccC
Q 047196 804 LTGDRSMI---QTETLVTIGYMAPGLL 827 (827)
Q Consensus 804 ~~~~~~~~---~~~~~gt~~Y~APE~l 827 (827)
........ .....||++|+|||++
T Consensus 163 ~~~~~~~~~~~~~~~~gt~~y~aPE~~ 189 (301)
T 3q4u_A 163 HSQSTNQLDVGNNPRVGTKRYMAPEVL 189 (301)
T ss_dssp EETTTTEEECCCCCCCCCGGGCCHHHH
T ss_pred cccccccccccccccccccceeChhhh
Confidence 65443321 1223689999999963
No 176
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.81 E-value=3.8e-20 Score=202.83 Aligned_cols=157 Identities=21% Similarity=0.359 Sum_probs=118.7
Q ss_pred hHHHHHhhcccccceEecCCceEEEEEEe------cCCcEEEEEEEcccc-hHHHHHHHHHHHHHHhc-CCCCceEEEee
Q 047196 668 QDLFRATEKFSKENLIGVGSFGSVYKGRL------HDGIEVAIKVFHQNC-AMALKSFEAECEVMKNI-RHRNHVKRISS 739 (827)
Q Consensus 668 ~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~~~~~ 739 (827)
.++....++|...+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|+++++++ +|||||+++++
T Consensus 15 ~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~ 94 (359)
T 3vhe_A 15 SKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGA 94 (359)
T ss_dssp HHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEE
T ss_pred ccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeee
Confidence 34444567899999999999999999973 246889999997643 34457799999999999 78999999999
Q ss_pred eecCCc---eeeeeecc---------C-----------------------------------------------------
Q 047196 740 CSNEDF---KALDCLHS---------T----------------------------------------------------- 754 (827)
Q Consensus 740 ~~~~~~---~~l~~l~~---------~----------------------------------------------------- 754 (827)
|...+. .++++... .
T Consensus 95 ~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (359)
T 3vhe_A 95 CTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLS 174 (359)
T ss_dssp ECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------------------------------------------
T ss_pred eecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccc
Confidence 877543 22233211 0
Q ss_pred ------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc-c
Q 047196 755 ------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM-I 811 (827)
Q Consensus 755 ------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~-~ 811 (827)
...+++.....++.++++||+||| +.+|+||||||+||+ |||+++........ .
T Consensus 175 ~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~ 251 (359)
T 3vhe_A 175 DVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVR 251 (359)
T ss_dssp ---------CTTTTCBCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEE
T ss_pred hhhhcccccchhccccCHHHHHHHHHHHHHHHHHHH---HCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccchh
Confidence 011677788899999999999996 568999999999998 99999876443322 2
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
.....||++|+|||++
T Consensus 252 ~~~~~~t~~y~aPE~~ 267 (359)
T 3vhe_A 252 KGDARLPLKWMAPETI 267 (359)
T ss_dssp C--CEECGGGCCHHHH
T ss_pred ccccCCCceeEChhhh
Confidence 2334589999999963
No 177
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.80 E-value=6.8e-20 Score=199.36 Aligned_cols=151 Identities=25% Similarity=0.363 Sum_probs=116.6
Q ss_pred HhhcccccceEecCCceEEEEEEec------CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH------DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF 745 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~ 745 (827)
..++|...+.||+|+||.||+|+.. +++.||||++.... ....+.|.+|++++++++|||||++++++...+.
T Consensus 45 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 124 (343)
T 1luf_A 45 PRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKP 124 (343)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSS
T ss_pred cHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCc
Confidence 3467888999999999999999874 34889999997543 3446789999999999999999999999987665
Q ss_pred eeeeeeccCC----------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCC
Q 047196 746 KALDCLHSTN----------------------------------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLK 791 (827)
Q Consensus 746 ~~l~~l~~~~----------------------------------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK 791 (827)
.++...+... ..+++.+...++.++++||+||| +.+|+|||||
T Consensus 125 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlk 201 (343)
T 1luf_A 125 MCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLS---ERKFVHRDLA 201 (343)
T ss_dssp CEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCS
T ss_pred eEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCC
Confidence 4432222111 34677788899999999999996 5689999999
Q ss_pred Cccee----------eecccccccCCCcc-ccccceeccccccccc
Q 047196 792 PKNVF----------DFGIGRLLTGDRSM-IQTETLVTIGYMAPGL 826 (827)
Q Consensus 792 ~~NIl----------DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~ 826 (827)
|+||+ |||+++........ ......+|++|+|||+
T Consensus 202 p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~ 247 (343)
T 1luf_A 202 TRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPES 247 (343)
T ss_dssp GGGEEECGGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHH
T ss_pred cceEEECCCCeEEEeecCCCcccccCccccccCCCcccceecChhh
Confidence 99998 99999876433211 1222347999999996
No 178
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.80 E-value=7.9e-20 Score=195.72 Aligned_cols=146 Identities=25% Similarity=0.415 Sum_probs=112.0
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeeccC
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHST 754 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~~~ 754 (827)
++|+..+.||+|+||.||+|+.. ++.||||++... ...+.|.+|++++++++|||||++++++.+..+.++++....
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~lv~e~~~~~ 84 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE--SERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGG 84 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST--THHHHHHHHHHHHHHCCCTTBCCEEEBCTTTTEEEEECCTTC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh--hHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCcEEEEEcCCCC
Confidence 56888899999999999999875 688999998643 345679999999999999999999999886655555554321
Q ss_pred --------C---CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecccccccCCCcccc
Q 047196 755 --------N---CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQ 812 (827)
Q Consensus 755 --------~---~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~~~~~~~~~~~ 812 (827)
. ....+.....++.++++|++|||..|.++|+||||||+||+ |||+++......
T Consensus 85 ~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~---- 160 (307)
T 2eva_A 85 SLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM---- 160 (307)
T ss_dssp BHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------
T ss_pred CHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc----
Confidence 1 12567778899999999999999877789999999999998 999887553221
Q ss_pred ccceecccccccccC
Q 047196 813 TETLVTIGYMAPGLL 827 (827)
Q Consensus 813 ~~~~gt~~Y~APE~l 827 (827)
....||++|+|||++
T Consensus 161 ~~~~gt~~y~aPE~~ 175 (307)
T 2eva_A 161 TNNKGSAAWMAPEVF 175 (307)
T ss_dssp ----CCTTSSCHHHH
T ss_pred ccCCCCCceEChhhh
Confidence 223589999999963
No 179
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=195.33 Aligned_cols=147 Identities=25% Similarity=0.403 Sum_probs=116.4
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC--c--eee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNED--F--KAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~--~--~~l 748 (827)
++|...++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.... . .++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 56888999999999999999875 58999999997543 233567889999999999999999999987654 2 233
Q ss_pred eeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------------eeccccc
Q 047196 749 DCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGRL 803 (827)
Q Consensus 749 ~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------------DFGla~~ 803 (827)
+++... ...+++.....++.++++||+||| +.+|+||||||+||+ |||+|+.
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~ 165 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (319)
T ss_dssp ECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEE
T ss_pred eCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCCCCHHHEEEeccCCCCceEEEccCCCcee
Confidence 333211 112788888999999999999996 568999999999996 9999987
Q ss_pred ccCCCccccccceeccccccccc
Q 047196 804 LTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 804 ~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
....... ....||+.|+|||+
T Consensus 166 ~~~~~~~--~~~~gt~~y~aPE~ 186 (319)
T 4euu_A 166 LEDDEQF--VSLYGTEEYLHPDM 186 (319)
T ss_dssp CCTTCCB--CCCCSCGGGCCHHH
T ss_pred cCCCCce--eecccCCCccCHHH
Confidence 6544322 23458999999996
No 180
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.80 E-value=2.3e-20 Score=205.97 Aligned_cols=151 Identities=28% Similarity=0.437 Sum_probs=117.0
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--e
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--D 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~ 749 (827)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....++|.+|++++++++|||||+++++|...+..++ +
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 457888899999999999999976 68999999987542 3345678999999999999999999999987664443 3
Q ss_pred eeccC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 750 CLHST---------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 750 ~l~~~---------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
++... ...+++.....++.++++||+||| +.+|+||||||+||| |||+++........
T Consensus 193 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~ 269 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA 269 (377)
T ss_dssp CCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee
Confidence 33211 224677788899999999999996 568999999999998 99999865432211
Q ss_pred cc-ccceecccccccccC
Q 047196 811 IQ-TETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~-~~~~gt~~Y~APE~l 827 (827)
.. ....+++.|+|||++
T Consensus 270 ~~~~~~~~~~~y~aPE~~ 287 (377)
T 3cbl_A 270 ASGGLRQVPVKWTAPEAL 287 (377)
T ss_dssp CCSSCCEEEGGGSCHHHH
T ss_pred ecCCCCCCCcCcCCHhHh
Confidence 11 112368899999963
No 181
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.80 E-value=6.2e-20 Score=197.50 Aligned_cols=150 Identities=25% Similarity=0.385 Sum_probs=104.3
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l 751 (827)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++..++..++...
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457888999999999999999864 68999999986543 2234678899999999999999999999987765544322
Q ss_pred ccC---------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 752 HST---------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 752 ~~~---------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
+.. ...+.+.....++.|+++||+||| +.+|+||||||+||+ |||+++....
T Consensus 84 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 160 (317)
T 2pmi_A 84 FMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCH---ENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGI 160 (317)
T ss_dssp CCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCSSCEETTS
T ss_pred ecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCChHHeEEcCCCCEEECcCccceecCC
Confidence 211 123667777889999999999996 568999999999998 9999987643
Q ss_pred CCccccccceecccccccccC
Q 047196 807 DRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~l 827 (827)
.... ....+||+.|+|||++
T Consensus 161 ~~~~-~~~~~~t~~y~aPE~~ 180 (317)
T 2pmi_A 161 PVNT-FSSEVVTLWYRAPDVL 180 (317)
T ss_dssp CCCC-CCCCCSCCTTCCHHHH
T ss_pred Cccc-CCCCcccccccCchHh
Confidence 3221 2234589999999963
No 182
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.80 E-value=6.9e-20 Score=199.54 Aligned_cols=156 Identities=26% Similarity=0.339 Sum_probs=116.7
Q ss_pred HHHHHhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc-----hHHHHHHHHHHHHHHhcCCCCceEEEeeeec
Q 047196 669 DLFRATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC-----AMALKSFEAECEVMKNIRHRNHVKRISSCSN 742 (827)
Q Consensus 669 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~ 742 (827)
++....++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++|||||++++++.+
T Consensus 20 ~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~ 99 (345)
T 3hko_A 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED 99 (345)
T ss_dssp CHHHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred hhhhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc
Confidence 4556678899999999999999999986 468899999986432 2345789999999999999999999999988
Q ss_pred CCceeeeeeccCCCC--------------------------------------------------CCHHHHHHHHHHHHH
Q 047196 743 EDFKALDCLHSTNCS--------------------------------------------------LNIFDKLNIMIDVAS 772 (827)
Q Consensus 743 ~~~~~l~~l~~~~~~--------------------------------------------------l~~~~~~~i~~~ia~ 772 (827)
.+..++...+...+. +.+.....++.++++
T Consensus 100 ~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~ 179 (345)
T 3hko_A 100 EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFS 179 (345)
T ss_dssp SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHH
Confidence 775544322221111 123345679999999
Q ss_pred HHHHHHhcCCCCeEEccCCCccee------------eecccccccCCCcc---ccccceecccccccccC
Q 047196 773 ALEYLHFSHSTPVIHCDLKPKNVF------------DFGIGRLLTGDRSM---IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 773 ~L~~Lh~~h~~~iiHrDlK~~NIl------------DFGla~~~~~~~~~---~~~~~~gt~~Y~APE~l 827 (827)
||+||| +.+|+||||||+||+ |||+++.+...... ......||+.|+|||++
T Consensus 180 ~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 246 (345)
T 3hko_A 180 ALHYLH---NQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVL 246 (345)
T ss_dssp HHHHHH---HTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHH
T ss_pred HHHHHH---HCCccccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccccCchhh
Confidence 999996 568999999999998 99999876432211 12334589999999963
No 183
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.80 E-value=1.1e-19 Score=191.37 Aligned_cols=148 Identities=28% Similarity=0.369 Sum_probs=119.2
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
.++|...+.||+|+||.||+|+.. ++..||+|++........+.+.+|++++++++||||+++++++......++...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMEL 87 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEec
Confidence 457888999999999999999865 5789999999765444567899999999999999999999999887755443332
Q ss_pred cC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCCCc
Q 047196 753 ST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRS 809 (827)
Q Consensus 753 ~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~~~ 809 (827)
.. ...+++.+...++.++++|++||| +.+|+||||||+||+ |||+++.......
T Consensus 88 ~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~ 164 (277)
T 3f3z_A 88 CTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH---KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM 164 (277)
T ss_dssp CCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC
T ss_pred cCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc
Confidence 22 134677788899999999999996 568999999999997 9999987654332
Q ss_pred cccccceeccccccccc
Q 047196 810 MIQTETLVTIGYMAPGL 826 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~ 826 (827)
.....||++|+|||+
T Consensus 165 --~~~~~~t~~y~aPE~ 179 (277)
T 3f3z_A 165 --MRTKVGTPYYVSPQV 179 (277)
T ss_dssp --BCCCCSCTTTCCHHH
T ss_pred --hhccCCCCCccChHH
Confidence 223458999999996
No 184
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.80 E-value=9.9e-20 Score=208.82 Aligned_cols=149 Identities=21% Similarity=0.320 Sum_probs=118.4
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
.++|...++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+..++.
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 356888999999999999999875 69999999996532 12345688999999999999999999999887655443
Q ss_pred eeccC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 750 CLHST------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 750 ~l~~~------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
..+.. ...+++.....++.+++.||+||| +.+|+||||||+||| |||+|+.....
T Consensus 263 mEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH---~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~ 339 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLH---RERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 339 (576)
T ss_dssp ECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTT
T ss_pred EEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeccCCchheEEEeCCCCeEEEecccceecccC
Confidence 22221 123778888899999999999996 468999999999998 99999876543
Q ss_pred CccccccceecccccccccC
Q 047196 808 RSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~l 827 (827)
.. ....+||++|||||++
T Consensus 340 ~~--~~~~~GT~~Y~APEvl 357 (576)
T 2acx_A 340 QT--IKGRVGTVGYMAPEVV 357 (576)
T ss_dssp CC--EECCCSCGGGCCHHHH
T ss_pred cc--ccccCCCccccCHHHH
Confidence 32 1334699999999974
No 185
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.80 E-value=3.9e-20 Score=195.55 Aligned_cols=149 Identities=24% Similarity=0.433 Sum_probs=115.1
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--eee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--DCL 751 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~~l 751 (827)
.++|+..+.||+|+||.||+|+..++..||||++..... ..+++.+|++++++++|+||+++++++......++ ++.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 101 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM-SEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYM 101 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCC-CHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEecc
Confidence 457888899999999999999998888999999975432 24678999999999999999999999987665444 322
Q ss_pred cc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcccc
Q 047196 752 HS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQ 812 (827)
Q Consensus 752 ~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~ 812 (827)
.. ....+++.+...++.++++|++||| +.+|+||||||+||+ |||+++..........
T Consensus 102 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~ 178 (283)
T 3gen_A 102 ANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLE---SKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSS 178 (283)
T ss_dssp TTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHST
T ss_pred CCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCccceEEEcCCCCEEEccccccccccccccccc
Confidence 21 1245778888999999999999996 568999999999998 9999987643322222
Q ss_pred ccceeccccccccc
Q 047196 813 TETLVTIGYMAPGL 826 (827)
Q Consensus 813 ~~~~gt~~Y~APE~ 826 (827)
....+|+.|+|||+
T Consensus 179 ~~~~~~~~y~aPE~ 192 (283)
T 3gen_A 179 VGSKFPVRWSPPEV 192 (283)
T ss_dssp TSTTSCGGGCCHHH
T ss_pred cCCccCcccCCHHH
Confidence 22346889999996
No 186
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.80 E-value=7.6e-20 Score=193.17 Aligned_cols=151 Identities=25% Similarity=0.396 Sum_probs=105.8
Q ss_pred hhcccccceEecCCceEEEEEEec----CCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc-ee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH----DGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF-KA 747 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~-~~ 747 (827)
.++|+..+.||+|+||.||+|+.. .+..||||++... .....+.+.+|+.++++++|||||++++++.+... ..
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~lv 93 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 93 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSCEEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEccCccEEE
Confidence 357888899999999999999864 2567999998653 33445789999999999999999999999865443 22
Q ss_pred eeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 748 LDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 748 l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+++... ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 94 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 170 (281)
T 1mp8_A 94 MELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 170 (281)
T ss_dssp EECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECC-----------
T ss_pred EecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecccccHHHEEECCCCCEEECccccccccCccc
Confidence 333221 1235788888999999999999996 568999999999998 999998765433
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
........+|+.|+|||++
T Consensus 171 ~~~~~~~~~~~~y~aPE~~ 189 (281)
T 1mp8_A 171 YYKASKGKLPIKWMAPESI 189 (281)
T ss_dssp --------CCGGGCCHHHH
T ss_pred ccccccCCCcccccChhhc
Confidence 2222223468899999963
No 187
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.80 E-value=5.6e-20 Score=207.98 Aligned_cols=151 Identities=23% Similarity=0.436 Sum_probs=116.6
Q ss_pred HhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce-eeeee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK-ALDCL 751 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~-~l~~l 751 (827)
..++|...+.||+|+||.||+|++.++..||||++.... ...++|.+|++++++++|||||++++++..+... +++++
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~l~~~~~~~~~~lv~e~~ 264 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFM 264 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS-BCHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC-ccHHHHHHHHHHHhhCCCCCEeeEEEEEeCCccEEEEeec
Confidence 346788889999999999999999888899999997543 3457899999999999999999999998754322 22332
Q ss_pred ccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 752 HST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 752 ~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
... ...+.+.+...++.++++||+||| +.+|+||||||+||| |||+|+.........
T Consensus 265 ~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~ 341 (454)
T 1qcf_A 265 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 341 (454)
T ss_dssp TTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHT
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceec
Confidence 211 124566778889999999999996 567999999999998 999998764332222
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
.....+|+.|+|||++
T Consensus 342 ~~~~~~~~~y~aPE~~ 357 (454)
T 1qcf_A 342 REGAKFPIKWTAPEAI 357 (454)
T ss_dssp TCSSSSCGGGSCHHHH
T ss_pred cCCCcccccccCHHHh
Confidence 2223468899999963
No 188
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.80 E-value=1.2e-19 Score=197.76 Aligned_cols=146 Identities=22% Similarity=0.293 Sum_probs=117.5
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++|||||++++++.+....++..
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 57888999999999999999865 689999999965421 23467889999999999999999999998877555433
Q ss_pred eccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+... ..++......++.+++.||+||| +.+|+||||||+||+ |||+++......
T Consensus 121 e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~-- 195 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT-- 195 (350)
T ss_dssp ECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB--
T ss_pred cCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccccCccceEEECCCCCEEEcccccceeccCCc--
Confidence 33221 34667778889999999999996 568999999999998 999998764332
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
...+||+.|+|||++
T Consensus 196 --~~~~gt~~y~aPE~~ 210 (350)
T 1rdq_E 196 --WTLCGTPEALAPEII 210 (350)
T ss_dssp --CCCEECGGGCCHHHH
T ss_pred --ccccCCccccCHHHh
Confidence 234699999999963
No 189
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.80 E-value=7e-20 Score=209.29 Aligned_cols=150 Identities=29% Similarity=0.519 Sum_probs=118.6
Q ss_pred hhcccccceEecCCceEEEEEEecC-CcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--ee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--DC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~~ 750 (827)
..+|...+.||+|+||.||+|++.. +..||||++.... ...++|.+|++++++++|||||+++++|......++ ++
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~ 297 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 297 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc-cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEc
Confidence 3568888999999999999999764 8899999997543 235679999999999999999999999987664443 33
Q ss_pred ecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
+.. ....+.+.....++.++++||+||| +++|+||||||+||| |||+++....+...
T Consensus 298 ~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~ 374 (495)
T 1opk_A 298 MTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT 374 (495)
T ss_dssp CTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE
T ss_pred cCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCChhhEEECCCCcEEEeecccceeccCCcee
Confidence 221 1234677888899999999999996 568999999999998 99999887544332
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
......+|+.|+|||++
T Consensus 375 ~~~~~~~~~~y~aPE~~ 391 (495)
T 1opk_A 375 AHAGAKFPIKWTAPESL 391 (495)
T ss_dssp CCTTCCCCGGGCCHHHH
T ss_pred ecCCCcCCcceeCHhHH
Confidence 22333468899999963
No 190
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.80 E-value=8e-20 Score=204.43 Aligned_cols=150 Identities=26% Similarity=0.364 Sum_probs=110.9
Q ss_pred HhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch--------HHHHHHHHHHHHHHhcCCCCceEEEeeeecC
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA--------MALKSFEAECEVMKNIRHRNHVKRISSCSNE 743 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~ 743 (827)
..++|...+.||+|+||.||+|... +++.||||++..... .....+.+|++++++++|||||++++++..+
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~ 212 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAE 212 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEESS
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEecC
Confidence 4568999999999999999999864 689999999865321 1123588999999999999999999998665
Q ss_pred Cce-eeeeecc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eeccc
Q 047196 744 DFK-ALDCLHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIG 801 (827)
Q Consensus 744 ~~~-~l~~l~~--------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla 801 (827)
... +++++.. ....+.+.....++.++++||+||| +.+|+||||||+||| |||+|
T Consensus 213 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a 289 (419)
T 3i6u_A 213 DYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHS 289 (419)
T ss_dssp EEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSSSCCEEECCSSTT
T ss_pred ceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCCCcceEEEeecccc
Confidence 432 2233321 1235678888999999999999996 467999999999998 99999
Q ss_pred ccccCCCccccccceecccccccccC
Q 047196 802 RLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 802 ~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
+....... ....+||++|+|||++
T Consensus 290 ~~~~~~~~--~~~~~gt~~y~aPE~~ 313 (419)
T 3i6u_A 290 KILGETSL--MRTLCGTPTYLAPEVL 313 (419)
T ss_dssp TSCC-------------CTTCCTTTT
T ss_pred eecCCCcc--ccccCCCCCccCceee
Confidence 87643322 2334599999999974
No 191
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.80 E-value=1.7e-19 Score=199.36 Aligned_cols=150 Identities=27% Similarity=0.421 Sum_probs=116.8
Q ss_pred hcccccceEecCCceEEEEEEec--------CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCC
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH--------DGIEVAIKVFHQNC-AMALKSFEAECEVMKNI-RHRNHVKRISSCSNED 744 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~ 744 (827)
++|...+.||+|+||.||+|+.. ++..||||++.... ....+++.+|+++++++ +|||||++++++...+
T Consensus 69 ~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~ 148 (382)
T 3tt0_A 69 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDG 148 (382)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred hheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCC
Confidence 57888899999999999999852 23679999997543 44557899999999999 9999999999998766
Q ss_pred ceee--eeeccC------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--
Q 047196 745 FKAL--DCLHST------------------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-- 796 (827)
Q Consensus 745 ~~~l--~~l~~~------------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-- 796 (827)
..++ ++.... ...+++.+...|+.++++||+||| +.+|+||||||+||+
T Consensus 149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~ 225 (382)
T 3tt0_A 149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA---SKKCIHRDLAARNVLVT 225 (382)
T ss_dssp SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEC
T ss_pred ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCcceEEEc
Confidence 5443 332210 123788889999999999999996 568999999999998
Q ss_pred --------eecccccccCCCcc-ccccceecccccccccC
Q 047196 797 --------DFGIGRLLTGDRSM-IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 --------DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~l 827 (827)
|||+|+........ ......+|++|+|||++
T Consensus 226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~ 265 (382)
T 3tt0_A 226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEAL 265 (382)
T ss_dssp TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHH
T ss_pred CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHh
Confidence 99999876543221 12223478999999963
No 192
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.80 E-value=3.3e-20 Score=201.21 Aligned_cols=150 Identities=26% Similarity=0.361 Sum_probs=118.3
Q ss_pred HhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccch--------HHHHHHHHHHHHHHhcCCCCceEEEeeeecC
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCA--------MALKSFEAECEVMKNIRHRNHVKRISSCSNE 743 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--------~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~ 743 (827)
..++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++|||||++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 346789999999999999999985 4689999999865421 1234578899999999999999999999887
Q ss_pred Cceeeeeecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccc
Q 047196 744 DFKALDCLHS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802 (827)
Q Consensus 744 ~~~~l~~l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~ 802 (827)
...++...+. ....+++.....|+.++++||+||| +.+|+||||||+||+ |||+++
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~ 178 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR---LKDIIHRDIKDENIVIAEDFTIKLIDFGSAA 178 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEEeccCHHHEEEcCCCcEEEeecccce
Confidence 7554433221 1235678888899999999999996 568999999999998 999998
Q ss_pred cccCCCccccccceecccccccccC
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
........ ...+||++|+|||++
T Consensus 179 ~~~~~~~~--~~~~gt~~y~aPE~~ 201 (335)
T 3dls_A 179 YLERGKLF--YTFCGTIEYCAPEVL 201 (335)
T ss_dssp ECCTTCCB--CEECSCGGGCCHHHH
T ss_pred ECCCCCce--eccCCCccccChhhh
Confidence 76543321 234589999999963
No 193
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.80 E-value=9.9e-20 Score=198.45 Aligned_cols=150 Identities=21% Similarity=0.189 Sum_probs=117.5
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l 748 (827)
.++|+..++||+|+||+||+|+.+ +|+.||||++.... ....+.+.+|.++++.+ +||+|+++++++...+..++
T Consensus 19 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~l 98 (353)
T 2i0e_A 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 98 (353)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEE
T ss_pred hHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEE
Confidence 467999999999999999999876 48899999997542 12345688999999988 79999999999988765554
Q ss_pred eeeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 DCLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 ~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
...+... ..+++.....++.+++.||+||| +.+|+||||||+||+ |||+|+......
T Consensus 99 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~ 175 (353)
T 2i0e_A 99 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 175 (353)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT
T ss_pred EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC
Confidence 3333221 34667778889999999999996 568999999999998 999998643322
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
.. ....+||+.|||||++
T Consensus 176 ~~-~~~~~gt~~y~aPE~~ 193 (353)
T 2i0e_A 176 VT-TKTFCGTPDYIAPEII 193 (353)
T ss_dssp CC-BCCCCSCGGGCCHHHH
T ss_pred cc-cccccCCccccChhhh
Confidence 21 2335699999999973
No 194
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.80 E-value=1.8e-19 Score=203.67 Aligned_cols=148 Identities=24% Similarity=0.393 Sum_probs=119.1
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|+++++.++|||||++++++...+..++..
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56888899999999999999875 799999999965422 23467899999999999999999999998876554432
Q ss_pred ecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+. ....+++.....++.|++.|++||| +.+|+||||||+||+ |||+++.......
T Consensus 96 E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~- 171 (476)
T 2y94_A 96 EYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF- 171 (476)
T ss_dssp ECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCC-
T ss_pred eCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcccccHHHEEEecCCCeEEEeccchhhcccccc-
Confidence 222 1345778888999999999999995 678999999999998 9999987654322
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
....+||+.|+|||++
T Consensus 172 -~~~~~gt~~y~aPE~~ 187 (476)
T 2y94_A 172 -LRTSCGSPNYAAPEVI 187 (476)
T ss_dssp -BCCCCSCSTTCCHHHH
T ss_pred -ccccCCCcCeEChhhc
Confidence 2335699999999963
No 195
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.80 E-value=1e-21 Score=227.07 Aligned_cols=220 Identities=20% Similarity=0.205 Sum_probs=132.3
Q ss_pred cccceecCCCCCcEEEEEcCCCCCcc-------------------------ccCc---cccCCCCCCEEECCCCCCCccC
Q 047196 87 NWIGITCNVNSHRVTALNISSLNLQG-------------------------TIPP---QLGNLSSLTTLNLSHNKLSGDI 138 (827)
Q Consensus 87 ~W~gv~C~~~~~~v~~L~L~~~~l~g-------------------------~~~~---~l~~L~~L~~L~Ls~N~l~g~~ 138 (827)
.|..+.|+....+|-.+++..-.+.- ..+. .+..+++|+.|+|++|+++ .+
T Consensus 286 ~W~~~~~~~~~~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~L~~L~Ls~n~L~-~L 364 (567)
T 1dce_A 286 EWRTPDGRNRPSHVWLCDLPAASLNDQLPQHTFRVIWTGSDSQKECVLLKDRPECWCRDSATDEQLFRCELSVEKST-VL 364 (567)
T ss_dssp CCBCTTSSCCSEEEEEEECCGGGTSTTSSEEEEEEEETTTTEEEEEEEETTCSEEEEECCSTTTTSSSCCCCHHHHH-HH
T ss_pred eeccCCcccccceeEEeecCccccccccccceEEEeeccCCCCccccccCCCchhhhcccccCccceeccCChhhHH-hh
Confidence 68888887766777777775433321 0011 2367899999999999997 88
Q ss_pred ChhhhhccccceEEecCCC-------------CCCccccccCCCCCCcEEE-cCCCCCCCCcchhHhhccccccEEEeec
Q 047196 139 PPSIFTMHKLKFLDFSDNQ-------------LSGSLSSVTFNLSSVLDIR-LDSDKLSGELPVNICNYLHYLKVLFLAK 204 (827)
Q Consensus 139 p~~~~~l~~L~~LdLs~N~-------------l~g~~p~~~~~l~~L~~L~-L~~n~l~g~ip~~~~~~~~~L~~L~Ls~ 204 (827)
|++++++++|+.||+++|. +.+.+|..+.++++|+.|+ ++.|.+ ..|+.+.+++
T Consensus 365 p~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~------------~~L~~l~l~~ 432 (567)
T 1dce_A 365 QSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYL------------DDLRSKFLLE 432 (567)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHH------------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhccc------------chhhhhhhhc
Confidence 9999999999999998775 3444455555555555444 333221 1233344444
Q ss_pred ccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCcccCc
Q 047196 205 NMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVP 284 (827)
Q Consensus 205 N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 284 (827)
|.++...+ ..|+.|+|++|.+++ +|. ++++++|+.|+|++|+|+ .+|..++.+++|++|+|++|++++ +|
T Consensus 433 n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp 502 (567)
T 1dce_A 433 NSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD 502 (567)
T ss_dssp HHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG
T ss_pred ccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc
Confidence 44443222 136667777777765 454 666777777777777776 566667777777777777777665 44
Q ss_pred hhhhcCCCccEEEecCCcccccc-ChhhhcCCCCccEEeCcCCccccc
Q 047196 285 AAIFNMSTVKKIYLLDNSLLGSF-SLGIDLSLPNVERLNLGLNRFSGT 331 (827)
Q Consensus 285 ~~~~~l~~L~~L~l~~n~l~~~~-~~~~~~~l~~L~~L~L~~N~l~~~ 331 (827)
.+.++++|+.|++++|.+.+.. |..+. .+++|+.|+|++|.+++.
T Consensus 503 -~l~~l~~L~~L~Ls~N~l~~~~~p~~l~-~l~~L~~L~L~~N~l~~~ 548 (567)
T 1dce_A 503 -GVANLPRLQELLLCNNRLQQSAAIQPLV-SCPRLVLLNLQGNSLCQE 548 (567)
T ss_dssp -GGTTCSSCCEEECCSSCCCSSSTTGGGG-GCTTCCEEECTTSGGGGS
T ss_pred -ccCCCCCCcEEECCCCCCCCCCCcHHHh-cCCCCCEEEecCCcCCCC
Confidence 4555555554444444444433 33332 344444444444444433
No 196
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.79 E-value=9e-20 Score=198.92 Aligned_cols=147 Identities=25% Similarity=0.359 Sum_probs=102.7
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
.+.|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++|||||++++++...+..++...+
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 129 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLEL 129 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEe
Confidence 467888999999999999999975 58899999987542 345688999999999999999999999887655443322
Q ss_pred cC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCCCc
Q 047196 753 ST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRS 809 (827)
Q Consensus 753 ~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~~~ 809 (827)
.. ...+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.......
T Consensus 130 ~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~ 206 (349)
T 2w4o_A 130 VTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH---ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVL 206 (349)
T ss_dssp CCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccc
Confidence 21 234677888999999999999996 568999999999998 8999887643321
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
.....||++|+|||++
T Consensus 207 --~~~~~gt~~y~aPE~~ 222 (349)
T 2w4o_A 207 --MKTVCGTPGYCAPEIL 222 (349)
T ss_dssp --------CGGGSCHHHH
T ss_pred --cccccCCCCccCHHHh
Confidence 1234589999999963
No 197
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.79 E-value=9.4e-20 Score=197.81 Aligned_cols=145 Identities=22% Similarity=0.237 Sum_probs=109.1
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccc--------hHHHHHHHHHHHHHHhcC---------CCCceEE
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNC--------AMALKSFEAECEVMKNIR---------HRNHVKR 736 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~Ei~~l~~l~---------H~niv~~ 736 (827)
.++|+..+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++ |+|+|++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35788899999999999999987 68999999997542 122467899999999996 8888888
Q ss_pred Eeeeec------------------------------CCce--eeeeeccC-------CCCCCHHHHHHHHHHHHHHHHHH
Q 047196 737 ISSCSN------------------------------EDFK--ALDCLHST-------NCSLNIFDKLNIMIDVASALEYL 777 (827)
Q Consensus 737 ~~~~~~------------------------------~~~~--~l~~l~~~-------~~~l~~~~~~~i~~~ia~~L~~L 777 (827)
.+.+.. .... ++++...+ ...+++.....|+.|++.||+||
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~~qi~~aL~~l 177 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSILHQLTASLAVA 177 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 876431 2222 23333221 13467888899999999999999
Q ss_pred HhcCCCCeEEccCCCccee------------------------------eecccccccCCCccccccceecccccccccC
Q 047196 778 HFSHSTPVIHCDLKPKNVF------------------------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 778 h~~h~~~iiHrDlK~~NIl------------------------------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
| ++.+|+||||||+||| |||+|+.... ...+||+.|||||++
T Consensus 178 H--~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~------~~~~gt~~y~aPE~~ 249 (336)
T 2vuw_A 178 E--ASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD------GIVVFCDVSMDEDLF 249 (336)
T ss_dssp H--HHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET------TEEECCCCTTCSGGG
T ss_pred H--HhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC------CcEEEeecccChhhh
Confidence 7 2567999999999987 5677665432 224699999999975
No 198
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.79 E-value=9.8e-20 Score=199.54 Aligned_cols=148 Identities=23% Similarity=0.263 Sum_probs=110.4
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
.++|...+.||+|+||.||+|+.. +|+.||||++..... ..+.+.+|+.++++++|||||++++++......++...+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 97 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA-IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEY 97 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT-SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc-ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEe
Confidence 357888999999999999999875 789999999965432 235688999999999999999999999887755543333
Q ss_pred cC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------eecccccccCCCcc
Q 047196 753 ST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------DFGIGRLLTGDRSM 810 (827)
Q Consensus 753 ~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------DFGla~~~~~~~~~ 810 (827)
.. ...+++.....++.++++||+||| +.+|+||||||+||+ |||+|+.......
T Consensus 98 ~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L~~LH---~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~- 173 (361)
T 3uc3_A 98 ASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCH---SMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ- 173 (361)
T ss_dssp CCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------
T ss_pred CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCC-
Confidence 22 234677788899999999999996 568999999999998 9999875432221
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
....+||++|+|||++
T Consensus 174 -~~~~~gt~~y~aPE~~ 189 (361)
T 3uc3_A 174 -PKSTVGTPAYIAPEVL 189 (361)
T ss_dssp --------CTTSCHHHH
T ss_pred -CCCCcCCCCcCChhhh
Confidence 1234599999999963
No 199
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.79 E-value=4e-20 Score=208.83 Aligned_cols=151 Identities=25% Similarity=0.266 Sum_probs=109.0
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc---chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN---CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
.++|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++|||||++++++...+..++.
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 35788899999999999999986 46899999999653 223345788999999999999999999999887765543
Q ss_pred eeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 750 CLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 750 ~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
..+... ..+++.....++.++++||+|||. .++|+||||||+||| |||+|+.......
T Consensus 227 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~--~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~ 304 (446)
T 4ejn_A 227 MEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA 304 (446)
T ss_dssp ECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH--HTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC---
T ss_pred EeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHhh--cCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCc
Confidence 333222 345677788899999999999974 268999999999998 9999986543322
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
. ....+||++|||||++
T Consensus 305 ~-~~~~~gt~~y~aPE~~ 321 (446)
T 4ejn_A 305 T-MKTFCGTPEYLAPEVL 321 (446)
T ss_dssp ---CCSSSCGGGCCHHHH
T ss_pred c-cccccCCccccCHhhc
Confidence 2 2335699999999973
No 200
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.79 E-value=1.5e-19 Score=206.43 Aligned_cols=149 Identities=26% Similarity=0.413 Sum_probs=117.8
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
.++|...++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++......++..
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 467899999999999999999865 68999999986432 223467899999999999999999999998877555433
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCC
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGD 807 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~ 807 (827)
.+.. ...+++.....++.++++||.||| +.+|+||||||+||+ |||+|+.....
T Consensus 101 e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~ 177 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177 (486)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC
T ss_pred EcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCC
Confidence 2222 134677788899999999999996 568999999999998 99999876543
Q ss_pred CccccccceecccccccccC
Q 047196 808 RSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~l 827 (827)
.. ....+||++|+|||++
T Consensus 178 ~~--~~~~~gt~~y~aPE~~ 195 (486)
T 3mwu_A 178 TK--MKDRIGTAYYIAPEVL 195 (486)
T ss_dssp ------CCTTGGGGCCGGGG
T ss_pred Cc--cCCCcCCCCCCCHHHh
Confidence 32 2334599999999974
No 201
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.79 E-value=1.6e-19 Score=191.07 Aligned_cols=147 Identities=30% Similarity=0.442 Sum_probs=113.6
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++......++...+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 56888999999999999999864 68999999986543 22357799999999999999999999999877654443222
Q ss_pred cC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eeccccccc
Q 047196 753 ST--------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLT 805 (827)
Q Consensus 753 ~~--------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~ 805 (827)
.. ...+++.....++.++++||+||| +.+|+||||||+||+ |||+++...
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~ 178 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFH---SQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFK 178 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecC
Confidence 21 134677788899999999999996 568999999999998 999997764
Q ss_pred CCCccccccceeccccccccc
Q 047196 806 GDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 806 ~~~~~~~~~~~gt~~Y~APE~ 826 (827)
.... .....||+.|+|||+
T Consensus 179 ~~~~--~~~~~~t~~y~aPE~ 197 (285)
T 3is5_A 179 SDEH--STNAAGTALYMAPEV 197 (285)
T ss_dssp ----------CTTGGGCCHHH
T ss_pred Cccc--CcCcccccCcCChHH
Confidence 4322 223458999999996
No 202
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.79 E-value=1.3e-19 Score=202.88 Aligned_cols=144 Identities=29% Similarity=0.448 Sum_probs=111.3
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecC----C--ce-
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNE----D--FK- 746 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~----~--~~- 746 (827)
.+|...++||+|+||.||+|+.. +|+.||||++..... .+.+|++++++++|+|||++++++... + +.
T Consensus 54 ~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 54 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred ceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 36888899999999999999975 689999999865422 235799999999999999999987542 1 11
Q ss_pred -eeeeecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eeccccc
Q 047196 747 -ALDCLHS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRL 803 (827)
Q Consensus 747 -~l~~l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~~ 803 (827)
+++++.. ....+.+.....++.|+++||+||| +.+|+||||||+||| |||+|+.
T Consensus 130 lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~ 206 (420)
T 1j1b_A 130 LVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQ 206 (420)
T ss_dssp EEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECSCCSGGGEEEETTTTEEEECCCTTCEE
T ss_pred eehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChhhEEEeCCCCeEEeccchhhhh
Confidence 2222211 1245677778899999999999996 678999999999998 9999987
Q ss_pred ccCCCccccccceecccccccccC
Q 047196 804 LTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 804 ~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
+..... ....+||++|+|||++
T Consensus 207 ~~~~~~--~~~~~~t~~y~aPE~~ 228 (420)
T 1j1b_A 207 LVRGEP--NVSYICSRYYRAPELI 228 (420)
T ss_dssp CCTTCC--CCSCCSCTTSCCHHHH
T ss_pred cccCCC--ceeeeeCCCcCCHHHH
Confidence 644332 2335689999999963
No 203
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.79 E-value=6.7e-20 Score=196.67 Aligned_cols=150 Identities=22% Similarity=0.407 Sum_probs=110.8
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc---chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC------
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN---CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED------ 744 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~------ 744 (827)
++|+..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++|||||++++++....
T Consensus 12 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~ 91 (311)
T 3ork_A 12 DRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLP 91 (311)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred CcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCccc
Confidence 5788899999999999999986 57899999999754 2334567999999999999999999999986543
Q ss_pred ceeeeeecc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 745 FKALDCLHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 745 ~~~l~~l~~--------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
+.+++++.. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++....
T Consensus 92 ~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 168 (311)
T 3ork_A 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIAD 168 (311)
T ss_dssp EEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTSCEEECCCSCC-----
T ss_pred EEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccc
Confidence 334444322 1235778888999999999999996 568999999999998 9999987654
Q ss_pred CCcc--ccccceecccccccccC
Q 047196 807 DRSM--IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~--~~~~~~gt~~Y~APE~l 827 (827)
.... .....+||++|+|||++
T Consensus 169 ~~~~~~~~~~~~gt~~y~aPE~~ 191 (311)
T 3ork_A 169 SGNSVTQTAAVIGTAQYLSPEQA 191 (311)
T ss_dssp -------------CCTTCCHHHH
T ss_pred cccccccccccCcCcccCCHHHh
Confidence 3221 11224589999999963
No 204
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.79 E-value=2.5e-19 Score=198.59 Aligned_cols=151 Identities=16% Similarity=0.211 Sum_probs=118.1
Q ss_pred hhcccccceEecC--CceEEEEEEec-CCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 674 TEKFSKENLIGVG--SFGSVYKGRLH-DGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 674 ~~~~~~~~~iG~G--~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
.++|+..++||+| +||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 4679999999999 99999999975 69999999996542 3445778999999999999999999999988775544
Q ss_pred eeeccC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 749 DCLHST------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 749 ~~l~~~------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
...+.. ...+++.....++.++++||+||| +.+|+||||||+||| |||.+.....
T Consensus 104 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~ 180 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIH---HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMIS 180 (389)
T ss_dssp EEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCGGGCEECEE
T ss_pred EEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEcCCCCEEEcccccceeecc
Confidence 322221 144677888899999999999996 568999999999998 8998865432
Q ss_pred CCcc------ccccceecccccccccC
Q 047196 807 DRSM------IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~------~~~~~~gt~~Y~APE~l 827 (827)
.... .....+||+.|+|||++
T Consensus 181 ~~~~~~~~~~~~~~~~gt~~y~aPE~~ 207 (389)
T 3gni_B 181 HGQRQRVVHDFPKYSVKVLPWLSPEVL 207 (389)
T ss_dssp TTEECSCBCCCCTTCTTTGGGSCHHHH
T ss_pred ccccccccccccccccccccccCHHHH
Confidence 2111 11223589999999973
No 205
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.79 E-value=3.5e-19 Score=188.22 Aligned_cols=148 Identities=24% Similarity=0.406 Sum_probs=117.9
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
.++|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||+++++++..+...++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467888999999999999999865 6899999998653 2344577899999999999999999999998877554433
Q ss_pred eccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCC
Q 047196 751 LHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGD 807 (827)
Q Consensus 751 l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~ 807 (827)
.+... ..+++.....++.+++.|++||| +.+|+||||||+||+ |||++......
T Consensus 85 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~ 161 (284)
T 3kk8_A 85 DLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161 (284)
T ss_dssp CCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSS
T ss_pred ecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccC
Confidence 32221 23667778899999999999996 568999999999998 89998766433
Q ss_pred Cccccccceeccccccccc
Q 047196 808 RSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~ 826 (827)
.. .....||++|+|||+
T Consensus 162 ~~--~~~~~~~~~y~aPE~ 178 (284)
T 3kk8_A 162 EA--WHGFAGTPGYLSPEV 178 (284)
T ss_dssp CB--CCCSCSCGGGCCHHH
T ss_pred cc--ccCCCCCcCCcCchh
Confidence 22 123458999999996
No 206
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.79 E-value=2.1e-19 Score=195.63 Aligned_cols=151 Identities=25% Similarity=0.411 Sum_probs=114.7
Q ss_pred HhhcccccceEecCCceEEEEEEe------cCCcEEEEEEEcccc-hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCC
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRL------HDGIEVAIKVFHQNC-AMALKSFEAECEVMKNI-RHRNHVKRISSCSNED 744 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~ 744 (827)
..++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...+
T Consensus 43 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~ 122 (344)
T 1rjb_A 43 PRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSG 122 (344)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCC
Confidence 346788899999999999999985 245789999997542 33456899999999999 8999999999998766
Q ss_pred ceeeeeeccCC---------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCC
Q 047196 745 FKALDCLHSTN---------------------------------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLK 791 (827)
Q Consensus 745 ~~~l~~l~~~~---------------------------------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK 791 (827)
..++...+... ..+++.....++.++++||+||| +.+|+|||||
T Consensus 123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dik 199 (344)
T 1rjb_A 123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE---FKSCVHRDLA 199 (344)
T ss_dssp SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHH---HTTEEETTCS
T ss_pred ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCC
Confidence 54432222111 12577788899999999999996 5689999999
Q ss_pred Cccee----------eecccccccCCCccc-cccceeccccccccc
Q 047196 792 PKNVF----------DFGIGRLLTGDRSMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 792 ~~NIl----------DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~ 826 (827)
|+||+ |||+++......... .....||++|+|||+
T Consensus 200 p~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~ 245 (344)
T 1rjb_A 200 ARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPES 245 (344)
T ss_dssp GGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHH
T ss_pred hhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccCccCHHH
Confidence 99998 999998765443322 223447899999996
No 207
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.79 E-value=1.8e-19 Score=189.61 Aligned_cols=147 Identities=22% Similarity=0.356 Sum_probs=100.5
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++..
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5688899999999999999986 468999999986542 223567899999999999999999999998776554422
Q ss_pred ecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 751 LHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 751 l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
.+. ....+++.+...++.++++|++||| +.+|+||||||+||+ |||+++.......
T Consensus 93 e~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-- 167 (275)
T 2eue_A 93 EYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCH---RHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF-- 167 (275)
T ss_dssp ECCCEEHHHHHHTSSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCSSCC----------
T ss_pred hhcCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeeccCChHhEEECCCCCEEEeecccceeccCccc--
Confidence 221 1245778888999999999999996 567999999999998 9999987654322
Q ss_pred cccceeccccccccc
Q 047196 812 QTETLVTIGYMAPGL 826 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~ 826 (827)
.....||++|+|||+
T Consensus 168 ~~~~~~t~~y~aPE~ 182 (275)
T 2eue_A 168 LKTSCGSPNYAAPEV 182 (275)
T ss_dssp -------CTTCCHHH
T ss_pred ccCCCCCcCcCCcee
Confidence 123458999999996
No 208
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.79 E-value=1.6e-19 Score=198.41 Aligned_cols=149 Identities=19% Similarity=0.217 Sum_probs=115.0
Q ss_pred HhhcccccceEecCCceEEEEEE------ecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC---CCCceEEEeeeecC
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGR------LHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR---HRNHVKRISSCSNE 743 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~------~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~---H~niv~~~~~~~~~ 743 (827)
..++|...++||+|+||.||+|+ ..+++.||||++.... ..++.+|++++++++ |+|+|++++++...
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~---~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~ 139 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPAN---PWEFYIGTQLMERLKPSMQHMFMKFYSAHLFQ 139 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCC---HHHHHHHHHHHHHSCGGGGGGBCCEEEEEECS
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCC---hhHHHHHHHHHHHhhhhhhhhhhhhheeeecC
Confidence 34678889999999999999994 3468899999997543 346788898888888 99999999999877
Q ss_pred Cceeeeeecc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------
Q 047196 744 DFKALDCLHS---------------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------ 796 (827)
Q Consensus 744 ~~~~l~~l~~---------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------ 796 (827)
+..++...+. ....+++.....|+.++++||+||| +.+|+||||||+|||
T Consensus 140 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH---~~~ivHrDiKp~NIll~~~~~~~~~~~ 216 (365)
T 3e7e_A 140 NGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVH---DCEIIHGDIKPDNFILGNGFLEQDDED 216 (365)
T ss_dssp SCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECGGGTCC----
T ss_pred CCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeecCCCCHHHEEecccccCccccc
Confidence 6554432221 1235778889999999999999996 578999999999997
Q ss_pred ---------eecccccccCCC-ccccccceecccccccccC
Q 047196 797 ---------DFGIGRLLTGDR-SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ---------DFGla~~~~~~~-~~~~~~~~gt~~Y~APE~l 827 (827)
|||+|+.+.... .......+||++|||||++
T Consensus 217 ~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~ 257 (365)
T 3e7e_A 217 DLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEML 257 (365)
T ss_dssp --CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHH
T ss_pred cccCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHh
Confidence 899987654221 1122345699999999973
No 209
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.79 E-value=2.2e-19 Score=192.76 Aligned_cols=150 Identities=23% Similarity=0.406 Sum_probs=116.2
Q ss_pred hhcccccceEecCCceEEEEEEe------cCCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL------HDGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK 746 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~ 746 (827)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+++.+|++++++++|||||++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45788889999999999999975 235889999997543 44567899999999999999999999999876654
Q ss_pred eeeeeccCC----------------------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCC
Q 047196 747 ALDCLHSTN----------------------------------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKP 792 (827)
Q Consensus 747 ~l~~l~~~~----------------------------------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~ 792 (827)
++...+... ..+++.+...++.++++||+||| +.+|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLA---EMKLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHH---HTTEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHH---HCCCcccccch
Confidence 442222111 12567778899999999999996 56899999999
Q ss_pred ccee----------eecccccccCCCccc-cccceeccccccccc
Q 047196 793 KNVF----------DFGIGRLLTGDRSMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 793 ~NIl----------DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~ 826 (827)
+||+ |||+++......... .....+|+.|+|||+
T Consensus 179 ~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 223 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIES 223 (314)
T ss_dssp GGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHH
T ss_pred heEEEcCCCCEEEccccccccccccccceeccCCCCcccccChhh
Confidence 9998 999998765433322 122347889999996
No 210
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.79 E-value=1.5e-19 Score=204.40 Aligned_cols=150 Identities=26% Similarity=0.448 Sum_probs=111.5
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce-eeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK-ALDCLH 752 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~-~l~~l~ 752 (827)
.++|...+.||+|+||.||+|++.++..||||++.... ...++|.+|++++++++|||||++++++.++... +++++.
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~iv~e~~~ 261 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMS 261 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCCT
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEcCCceEEEehhhc
Confidence 45688889999999999999999888889999987543 2346799999999999999999999998764322 223332
Q ss_pred cC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcccc
Q 047196 753 ST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQ 812 (827)
Q Consensus 753 ~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~ 812 (827)
.. ...+++.+...++.++++||+||| +++|+||||||+||| |||+++..........
T Consensus 262 ~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~ 338 (452)
T 1fmk_A 262 KGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 338 (452)
T ss_dssp TCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------
T ss_pred CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecc
Confidence 21 124677788899999999999996 568999999999998 9999987654332222
Q ss_pred ccceecccccccccC
Q 047196 813 TETLVTIGYMAPGLL 827 (827)
Q Consensus 813 ~~~~gt~~Y~APE~l 827 (827)
....+|+.|+|||++
T Consensus 339 ~~~~~~~~y~aPE~~ 353 (452)
T 1fmk_A 339 QGAKFPIKWTAPEAA 353 (452)
T ss_dssp ----CCGGGSCHHHH
T ss_pred cCCcccccccCHhHH
Confidence 223468899999963
No 211
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.79 E-value=2.7e-19 Score=204.72 Aligned_cols=149 Identities=24% Similarity=0.334 Sum_probs=117.9
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL-- 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l-- 748 (827)
++|...++||+|+||.||+|+.+ +|+.||||++..... ...+.+.+|++++++++|||||++++++......++
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888899999999999999875 699999999965422 234678899999999999999999999887765444
Q ss_pred eeeccC------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 749 DCLHST------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 749 ~~l~~~------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
+++... ...+.+.....++.+++.||+||| +.+|+||||||+||+ |||+++.+..
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH---~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~ 341 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLH---QRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKA 341 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHH---HcCCcccCCChHHEEEeCCCCEEEeecceeeeccC
Confidence 332211 124677788889999999999996 568999999999998 9999987654
Q ss_pred CCccccccceecccccccccC
Q 047196 807 DRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~l 827 (827)
.... ....+||+.|||||++
T Consensus 342 ~~~~-~~~~~GT~~Y~APE~l 361 (543)
T 3c4z_A 342 GQTK-TKGYAGTPGFMAPELL 361 (543)
T ss_dssp TCCC-BCCCCSCTTTSCHHHH
T ss_pred CCcc-cccccCCccccChhhh
Confidence 4322 2234699999999974
No 212
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.79 E-value=1.6e-19 Score=206.56 Aligned_cols=149 Identities=28% Similarity=0.420 Sum_probs=115.2
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
.+.|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++......++..
T Consensus 36 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 115 (494)
T 3lij_A 36 SEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVM 115 (494)
T ss_dssp HHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 356888999999999999999875 68999999987543 223567899999999999999999999998877555433
Q ss_pred eccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCC
Q 047196 751 LHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGD 807 (827)
Q Consensus 751 l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~ 807 (827)
.+... ..+++.....++.++++||+||| +.+|+||||||+||+ |||+|+.....
T Consensus 116 e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~ 192 (494)
T 3lij_A 116 ECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQ 192 (494)
T ss_dssp ECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTT
T ss_pred ecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCC
Confidence 33221 34667778899999999999996 568999999999998 99999876543
Q ss_pred CccccccceecccccccccC
Q 047196 808 RSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~l 827 (827)
.. ....+||++|+|||++
T Consensus 193 ~~--~~~~~gt~~y~aPE~l 210 (494)
T 3lij_A 193 KK--MKERLGTAYYIAPEVL 210 (494)
T ss_dssp BC--BCCCCSCTTTCCHHHH
T ss_pred cc--ccccCCCcCeeCHHHH
Confidence 32 2335699999999973
No 213
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.79 E-value=3.9e-19 Score=190.62 Aligned_cols=149 Identities=31% Similarity=0.407 Sum_probs=113.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l 751 (827)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++......++...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 56888999999999999999875 58999999986543 3345678899999999999999999999988765444222
Q ss_pred cc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 752 HS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 752 ~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
+. ....+++.....++.++++|++||| +.+|+||||||+||+ |||+++........
T Consensus 83 ~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 158 (311)
T 4agu_A 83 YCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCH---KHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDY- 158 (311)
T ss_dssp CCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------
T ss_pred eCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccc-
Confidence 21 1345778888899999999999996 568999999999998 99999876533221
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
.....||++|+|||++
T Consensus 159 ~~~~~~~~~y~aPE~~ 174 (311)
T 4agu_A 159 YDDEVATRWYRSPELL 174 (311)
T ss_dssp -------GGGCCHHHH
T ss_pred cCCCcCCccccChHHH
Confidence 2334589999999963
No 214
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.79 E-value=9.9e-20 Score=198.48 Aligned_cols=151 Identities=27% Similarity=0.419 Sum_probs=112.0
Q ss_pred HhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchH-----HHHHHHHHHHHHHhcCCCCceEEEeeeecCCce
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAM-----ALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK 746 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-----~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~ 746 (827)
..++|...+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++|||||++++++......
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4567999999999999999999875 6899999998643211 134688999999999999999999999776544
Q ss_pred ee--eeec--------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 747 AL--DCLH--------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 747 ~l--~~l~--------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
++ +++. .....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++....
T Consensus 88 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~ 164 (346)
T 1ua2_A 88 SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164 (346)
T ss_dssp EEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTS
T ss_pred EEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH---HCCEECCCCCHHHEEEcCCCCEEEEecccceeccC
Confidence 43 2221 11234667778899999999999996 567999999999998 9999987654
Q ss_pred CCccccccceecccccccccC
Q 047196 807 DRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~l 827 (827)
.... ....+||++|+|||++
T Consensus 165 ~~~~-~~~~~~t~~y~aPE~~ 184 (346)
T 1ua2_A 165 PNRA-YTHQVVTRWYRAPELL 184 (346)
T ss_dssp CCCC-CCCSCCCCTTCCHHHH
T ss_pred Cccc-CCcccccccccCchHh
Confidence 3322 2335689999999963
No 215
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.79 E-value=1.1e-19 Score=194.56 Aligned_cols=148 Identities=26% Similarity=0.502 Sum_probs=111.2
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCcee-eeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKA-LDCL 751 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~-l~~l 751 (827)
++|...+.||+|+||.||+|+... .||||+++.. .....+.|.+|++++++++|||||++++++..+...+ +++.
T Consensus 36 ~~~~~~~~lG~G~~g~Vy~~~~~~--~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~~ 113 (307)
T 3lb7_A 36 SEVMLSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWC 113 (307)
T ss_dssp TSCCEEEEEEECSSCEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred cceEEEeEecCCCCeEEEEEEECC--EEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCcEEEEEecC
Confidence 567888999999999999998653 6899987642 3445678999999999999999999999887655332 2332
Q ss_pred c---------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc-cc
Q 047196 752 H---------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS-MI 811 (827)
Q Consensus 752 ~---------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~-~~ 811 (827)
. .....+++.+...|+.++++||+||| +.+|+||||||+||+ |||+|+....... ..
T Consensus 114 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~~~ 190 (307)
T 3lb7_A 114 EGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLH---AKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQ 190 (307)
T ss_dssp SSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred CCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccccc
Confidence 2 12345778888999999999999996 468999999999998 9999986543221 11
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
.....||++|+|||++
T Consensus 191 ~~~~~gt~~y~aPE~~ 206 (307)
T 3lb7_A 191 VEQPTGSVLWMAPEVI 206 (307)
T ss_dssp ---CCCCTTSCCHHHH
T ss_pred ccCCCCCcceECccee
Confidence 2234589999999963
No 216
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.79 E-value=9.9e-20 Score=191.98 Aligned_cols=150 Identities=25% Similarity=0.460 Sum_probs=117.3
Q ss_pred HhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce-eeeee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK-ALDCL 751 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~-~l~~l 751 (827)
..++|+..+.||+|+||.||+|+..++..||||++.... ...+.+.+|++++++++|||++++++++..+... ++++.
T Consensus 11 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~ 89 (279)
T 1qpc_A 11 PRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS-MSPDAFLAEANLMKQLQHQRLVRLYAVVTQEPIYIITEYM 89 (279)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEEECC
T ss_pred CHHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc-ccHHHHHHHHHHHHhCCCcCcceEEEEEcCCCcEEEEecC
Confidence 346788899999999999999998888899999996543 2346789999999999999999999998755432 22333
Q ss_pred ccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 752 HST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 752 ~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
... ...+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.........
T Consensus 90 ~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 166 (279)
T 1qpc_A 90 ENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE---ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTA 166 (279)
T ss_dssp TTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEEC
T ss_pred CCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccccc
Confidence 211 114677888899999999999996 568999999999998 999998765433222
Q ss_pred cccceeccccccccc
Q 047196 812 QTETLVTIGYMAPGL 826 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~ 826 (827)
.....+|+.|+|||+
T Consensus 167 ~~~~~~~~~y~aPE~ 181 (279)
T 1qpc_A 167 REGAKFPIKWTAPEA 181 (279)
T ss_dssp CTTCCCCTTTSCHHH
T ss_pred ccCCCCccCccChhh
Confidence 223347889999996
No 217
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.79 E-value=3.8e-19 Score=191.96 Aligned_cols=141 Identities=27% Similarity=0.330 Sum_probs=99.3
Q ss_pred cceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcC-CCCceEEEeeeecCCceeeeeeccC---
Q 047196 680 ENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIR-HRNHVKRISSCSNEDFKALDCLHST--- 754 (827)
Q Consensus 680 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~-H~niv~~~~~~~~~~~~~l~~l~~~--- 754 (827)
.+.||+|+||.||+|+.. +|+.||||++... ....+.+|++++++++ |||||++++++.+....++...+..
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 478999999999999875 6899999998643 3456789999999998 9999999999988775554332221
Q ss_pred -------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCCCcccccc
Q 047196 755 -------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRSMIQTE 814 (827)
Q Consensus 755 -------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~~~~~~~~ 814 (827)
...+++.+...++.++++||+||| +.+|+||||||+||+ |||+++........ ...
T Consensus 93 L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~-~~~ 168 (325)
T 3kn6_A 93 LFERIKKKKHFSETEASYIMRKLVSAVSHMH---DVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQP-LKT 168 (325)
T ss_dssp HHHHHHHCSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC--------
T ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCc-ccc
Confidence 234677888899999999999996 568999999999998 99999866543322 233
Q ss_pred ceecccccccccC
Q 047196 815 TLVTIGYMAPGLL 827 (827)
Q Consensus 815 ~~gt~~Y~APE~l 827 (827)
.+||++|+|||++
T Consensus 169 ~~~t~~y~aPE~~ 181 (325)
T 3kn6_A 169 PCFTLHYAAPELL 181 (325)
T ss_dssp -------------
T ss_pred cCCCcCccCHHHh
Confidence 4589999999974
No 218
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.79 E-value=1.9e-19 Score=189.99 Aligned_cols=150 Identities=26% Similarity=0.440 Sum_probs=112.8
Q ss_pred hhcccccceEecCCceEEEEEEecC----CcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce-e
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHD----GIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK-A 747 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~-~ 747 (827)
.++|...+.||+|+||.||+|+... +..||||++... .....++|.+|++++++++|||++++++++.+.... .
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v 90 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEEEPTWII 90 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECSSSCEEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCEEE
Confidence 4678889999999999999998542 346999998754 344567899999999999999999999998765432 2
Q ss_pred eeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 748 LDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 748 l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+++... ....+++.....++.++++|++||| +.+|+||||||+||+ |||+++......
T Consensus 91 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 167 (281)
T 3cc6_A 91 MELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLE---SINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDED 167 (281)
T ss_dssp EECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC----
T ss_pred EecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCccceEEECCCCcEEeCccCCCccccccc
Confidence 233221 1234677888899999999999996 568999999999998 999998765433
Q ss_pred ccccccceeccccccccc
Q 047196 809 SMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~ 826 (827)
........+|++|+|||+
T Consensus 168 ~~~~~~~~~~~~y~aPE~ 185 (281)
T 3cc6_A 168 YYKASVTRLPIKWMSPES 185 (281)
T ss_dssp -----CCCCCGGGCCHHH
T ss_pred ccccccCCCCcceeCchh
Confidence 222223347889999996
No 219
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.79 E-value=2.4e-19 Score=197.39 Aligned_cols=148 Identities=24% Similarity=0.338 Sum_probs=107.5
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-------
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED------- 744 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~------- 744 (827)
++|...+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++|||||++++++....
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57888999999999999999864 6899999998653 2344567899999999999999999999987654
Q ss_pred -ceeeeeeccC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 745 -FKALDCLHST-----NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 745 -~~~l~~l~~~-----~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+.+++++... ...+++.....++.++++||+||| +.+|+||||||+||+ |||+|+......
T Consensus 105 ~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 181 (371)
T 2xrw_A 105 VYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 181 (371)
T ss_dssp EEEEEECCSEEHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCCCC--------
T ss_pred eEEEEEcCCCCHHHHHhhccCHHHHHHHHHHHHHHHHHHH---HCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc
Confidence 2223333211 134677778889999999999996 568999999999998 999998764332
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
. ....+||+.|+|||++
T Consensus 182 ~--~~~~~gt~~y~aPE~~ 198 (371)
T 2xrw_A 182 M--MTPYVVTRYYRAPEVI 198 (371)
T ss_dssp ----------CTTCCHHHH
T ss_pred c--cCCceecCCccCHHHh
Confidence 1 2334689999999963
No 220
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.79 E-value=1.3e-19 Score=189.57 Aligned_cols=148 Identities=26% Similarity=0.408 Sum_probs=116.4
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--eeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--DCLH 752 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~~l~ 752 (827)
++|...+.||+|+||.||+|+..+++.||||++..... ..+.+.+|++++++++|||++++++++...+..++ ++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 86 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM-SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFME 86 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB-CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCT
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCC
Confidence 56888899999999999999988888999999975432 23678999999999999999999999987654443 2221
Q ss_pred c---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccccc
Q 047196 753 S---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQT 813 (827)
Q Consensus 753 ~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~~ 813 (827)
. ....+++.....++.++++|++||| +.+|+||||||+||+ |||+++...........
T Consensus 87 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~ 163 (267)
T 3t9t_A 87 HGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLE---EACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSST 163 (267)
T ss_dssp TCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTT
T ss_pred CCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEECCCCCEEEcccccccccccccccccc
Confidence 1 1234677788899999999999996 568999999999998 99999876432221122
Q ss_pred cceeccccccccc
Q 047196 814 ETLVTIGYMAPGL 826 (827)
Q Consensus 814 ~~~gt~~Y~APE~ 826 (827)
...+|+.|+|||+
T Consensus 164 ~~~~~~~y~aPE~ 176 (267)
T 3t9t_A 164 GTKFPVKWASPEV 176 (267)
T ss_dssp STTCCGGGCCHHH
T ss_pred cccccccccChhh
Confidence 2347889999996
No 221
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.79 E-value=3e-19 Score=193.98 Aligned_cols=147 Identities=22% Similarity=0.382 Sum_probs=115.5
Q ss_pred HhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceeeee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l~~ 750 (827)
..++|+..+.||+|+||.||+|+.+ +|+.||||++..... .+.+|++++.++ +|||||++++++.+.+..++..
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ 95 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVT 95 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEE
Confidence 3467899999999999999999875 689999999965432 245788889888 7999999999998877555433
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------------eecccccccC
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGRLLTG 806 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------------DFGla~~~~~ 806 (827)
.+.. ...+++.+...++.++++||+||| +.+|+||||||+||+ |||+++....
T Consensus 96 E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH---~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~ 172 (342)
T 2qr7_A 96 ELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRA 172 (342)
T ss_dssp CCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBC
T ss_pred eCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcC
Confidence 2221 234677788899999999999996 568999999999997 9999987654
Q ss_pred CCccccccceecccccccccC
Q 047196 807 DRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~l 827 (827)
.... ....+||+.|+|||++
T Consensus 173 ~~~~-~~~~~gt~~y~aPE~~ 192 (342)
T 2qr7_A 173 ENGL-LMTPCYTANFVAPEVL 192 (342)
T ss_dssp TTCC-BCCSSCCSSCCCHHHH
T ss_pred CCCc-eeccCCCccccCHHHh
Confidence 4332 2234689999999973
No 222
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.79 E-value=1.1e-19 Score=199.46 Aligned_cols=156 Identities=24% Similarity=0.352 Sum_probs=114.6
Q ss_pred chhHHHHHhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccc-----------hHHHHHHHHHHHHHHhcCCCCce
Q 047196 666 SYQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNC-----------AMALKSFEAECEVMKNIRHRNHV 734 (827)
Q Consensus 666 ~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~-----------~~~~~~~~~Ei~~l~~l~H~niv 734 (827)
...++....++|...+.||+|+||.||+|+..+|+.||||++.... ....+.+.+|++++++++|||||
T Consensus 13 ~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv 92 (362)
T 3pg1_A 13 LIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNIL 92 (362)
T ss_dssp HHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred HHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCcc
Confidence 4566777788999999999999999999998889999999985321 12247899999999999999999
Q ss_pred EEEeeeecCC-------ceeeeeec--------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---
Q 047196 735 KRISSCSNED-------FKALDCLH--------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--- 796 (827)
Q Consensus 735 ~~~~~~~~~~-------~~~l~~l~--------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--- 796 (827)
++++++...+ +.++++.. .....+++.....++.++++||+||| +.+|+||||||+||+
T Consensus 93 ~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~ 169 (362)
T 3pg1_A 93 GLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLH---EAGVVHRDLHPGNILLAD 169 (362)
T ss_dssp CCSEEEEECCTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECT
T ss_pred ceeeeEEeccCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCcCEecCCChHHEEEcC
Confidence 9999885422 12223222 12235788889999999999999996 468999999999998
Q ss_pred -------eecccccccCCCccccccceeccccccccc
Q 047196 797 -------DFGIGRLLTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 797 -------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
|||+++....... .....||+.|+|||+
T Consensus 170 ~~~~kl~Dfg~~~~~~~~~~--~~~~~~t~~y~aPE~ 204 (362)
T 3pg1_A 170 NNDITICDFNLAREDTADAN--KTHYVTHRWYRAPEL 204 (362)
T ss_dssp TCCEEECCTTC-----------------CGGGCCHHH
T ss_pred CCCEEEEecCcccccccccc--cceecccceecCcHH
Confidence 9999976543322 233458999999996
No 223
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.78 E-value=1.4e-19 Score=195.86 Aligned_cols=152 Identities=23% Similarity=0.347 Sum_probs=112.0
Q ss_pred HHhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccch--HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 672 RATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCA--MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 672 ~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~--~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
...++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++|||||++++++......++
T Consensus 31 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 110 (329)
T 3gbz_A 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHL 110 (329)
T ss_dssp -CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEE
T ss_pred cchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEE
Confidence 3456899999999999999999985 4689999999865432 234568899999999999999999999988775544
Q ss_pred eeeccC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------------eecccccc
Q 047196 749 DCLHST---------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------------DFGIGRLL 804 (827)
Q Consensus 749 ~~l~~~---------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------------DFGla~~~ 804 (827)
...+.. ...+++.....|+.++++||+||| +.+|+||||||+||+ |||+|+..
T Consensus 111 v~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~ 187 (329)
T 3gbz_A 111 IFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCH---SRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAF 187 (329)
T ss_dssp EEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHH
T ss_pred EEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEECCCCCHHHEEEecCCCCccceEEECcCCCcccc
Confidence 332221 234677788899999999999996 568999999999987 89998876
Q ss_pred cCCCccccccceecccccccccC
Q 047196 805 TGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 805 ~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
...... ....+||++|+|||++
T Consensus 188 ~~~~~~-~~~~~~t~~y~aPE~~ 209 (329)
T 3gbz_A 188 GIPIRQ-FTHEIITLWYRPPEIL 209 (329)
T ss_dssp C------------CCTTCCHHHH
T ss_pred CCcccc-cCCCcCCccccCHHHh
Confidence 433221 2334589999999963
No 224
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.78 E-value=8.2e-19 Score=192.55 Aligned_cols=152 Identities=25% Similarity=0.387 Sum_probs=120.1
Q ss_pred HHHhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc--------hHHHHHHHHHHHHHHhc-CCCCceEEEeee
Q 047196 671 FRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC--------AMALKSFEAECEVMKNI-RHRNHVKRISSC 740 (827)
Q Consensus 671 ~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--------~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~ 740 (827)
....++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++++ +||||+++++++
T Consensus 90 ~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 169 (365)
T 2y7j_A 90 KEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSY 169 (365)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE
T ss_pred hhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEE
Confidence 344567999999999999999999975 79999999986432 12245788999999999 799999999999
Q ss_pred ecCCceeeeeeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecc
Q 047196 741 SNEDFKALDCLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGI 800 (827)
Q Consensus 741 ~~~~~~~l~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGl 800 (827)
......++...+... ..+++.....++.++++||.||| +.+|+||||||+||+ |||+
T Consensus 170 ~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~ 246 (365)
T 2y7j_A 170 ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGF 246 (365)
T ss_dssp EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTT
T ss_pred eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEECCCCCEEEEecCc
Confidence 877765553333222 34677778899999999999996 468999999999998 9999
Q ss_pred cccccCCCccccccceecccccccccC
Q 047196 801 GRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 801 a~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
++.+..... ....+||++|+|||++
T Consensus 247 ~~~~~~~~~--~~~~~gt~~y~aPE~~ 271 (365)
T 2y7j_A 247 SCHLEPGEK--LRELCGTPGYLAPEIL 271 (365)
T ss_dssp CEECCTTCC--BCCCCSCGGGCCHHHH
T ss_pred ccccCCCcc--cccCCCCCCccChhhc
Confidence 987654332 2334699999999963
No 225
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.78 E-value=1e-19 Score=199.04 Aligned_cols=151 Identities=25% Similarity=0.309 Sum_probs=117.2
Q ss_pred hhcccccceEecCCceEEEEEEe----cCCcEEEEEEEcccc----hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCC
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL----HDGIEVAIKVFHQNC----AMALKSFEAECEVMKNI-RHRNHVKRISSCSNED 744 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~----~~g~~vAvK~l~~~~----~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~ 744 (827)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|+++++++ +||||+++++++..+.
T Consensus 53 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 132 (355)
T 1vzo_A 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTET 132 (355)
T ss_dssp GGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETT
T ss_pred ccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCc
Confidence 36789999999999999999986 368999999986432 12345678899999999 6999999999998776
Q ss_pred ceeeeeeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccc
Q 047196 745 FKALDCLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLL 804 (827)
Q Consensus 745 ~~~l~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~ 804 (827)
..++...+... ..+++.....++.++++||+||| +.+|+||||||+||+ |||+++..
T Consensus 133 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~ 209 (355)
T 1vzo_A 133 KLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH---KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209 (355)
T ss_dssp EEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEESCSSEEEEC
T ss_pred eEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEECCCCcEEEeeCCCCeec
Confidence 55443333221 34667778889999999999996 568999999999998 99999876
Q ss_pred cCCCccccccceecccccccccC
Q 047196 805 TGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 805 ~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
...........+||++|+|||++
T Consensus 210 ~~~~~~~~~~~~gt~~y~aPE~~ 232 (355)
T 1vzo_A 210 VADETERAYDFCGTIEYMAPDIV 232 (355)
T ss_dssp CGGGGGGGCGGGSCCTTCCHHHH
T ss_pred ccCCCCcccCcccCcCccChhhh
Confidence 43333222334699999999973
No 226
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.78 E-value=2.5e-19 Score=193.63 Aligned_cols=150 Identities=25% Similarity=0.372 Sum_probs=118.0
Q ss_pred hcccccceEecCCceEEEEEEe-----cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC--cee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-----HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED--FKA 747 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~--~~~ 747 (827)
++|+..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++|+||+++++++..++ ..+
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 102 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLR 102 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEE
Confidence 5688889999999999999984 358899999998776666778999999999999999999999886432 222
Q ss_pred --eeeeccC---------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 748 --LDCLHST---------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 748 --l~~l~~~---------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
++++... ...+++.....++.++++||+||| +.+|+||||||+||+ |||+++....
T Consensus 103 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~ 179 (327)
T 3lxl_A 103 LVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLG---SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPL 179 (327)
T ss_dssp EEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCGGGCEECCT
T ss_pred EEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChhhEEECCCCCEEEcccccceeccc
Confidence 2333211 234678888999999999999996 568999999999998 9999987754
Q ss_pred CCcc--ccccceecccccccccC
Q 047196 807 DRSM--IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~--~~~~~~gt~~Y~APE~l 827 (827)
.... ......||+.|+|||++
T Consensus 180 ~~~~~~~~~~~~~~~~y~aPE~~ 202 (327)
T 3lxl_A 180 DKDYYVVREPGQSPIFWYAPESL 202 (327)
T ss_dssp TCSEEECSSCCCSCGGGSCHHHH
T ss_pred CCccceeeccCCccccccCHHHh
Confidence 4322 12223478899999963
No 227
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.78 E-value=4e-19 Score=203.84 Aligned_cols=149 Identities=27% Similarity=0.420 Sum_probs=116.5
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch-------------HHHHHHHHHHHHHHhcCCCCceEEEee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA-------------MALKSFEAECEVMKNIRHRNHVKRISS 739 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------------~~~~~~~~Ei~~l~~l~H~niv~~~~~ 739 (827)
.++|...+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++|||||+++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888999999999999999865 588999999865321 224678999999999999999999999
Q ss_pred eecCCceeeeeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------
Q 047196 740 CSNEDFKALDCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------- 796 (827)
Q Consensus 740 ~~~~~~~~l~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------- 796 (827)
+.+....++...+.. ...+++.....++.+++.||+||| +.+|+||||||+||+
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~ 191 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIV 191 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESSTTCCSSEEEC
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCeEeCCCcHHHEEEecCCCCccEEEE
Confidence 988776554333222 134677888899999999999996 568999999999998
Q ss_pred eecccccccCCCccccccceecccccccccC
Q 047196 797 DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+|+....... ....+||++|+|||++
T Consensus 192 Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~ 220 (504)
T 3q5i_A 192 DFGLSSFFSKDYK--LRDRLGTAYYIAPEVL 220 (504)
T ss_dssp CCTTCEECCTTSC--BCCCCSCTTTCCHHHH
T ss_pred ECCCCEEcCCCCc--cccccCCcCCCCHHHh
Confidence 9999987654432 2335699999999973
No 228
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.78 E-value=3e-19 Score=189.15 Aligned_cols=148 Identities=30% Similarity=0.479 Sum_probs=117.1
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchH-------HHHHHHHHHHHHHhcCCCCceEEEeeeecCCce
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAM-------ALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK 746 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~-------~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~ 746 (827)
++|+..+.||+|+||.||+|+. .+++.||||++...... ..+++.+|++++++++||||+++++++.+..+.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~l 98 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPRM 98 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTTEE
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCCeE
Confidence 5688889999999999999987 47899999998543211 126799999999999999999999999887766
Q ss_pred eeeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------------eecccc
Q 047196 747 ALDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------------DFGIGR 802 (827)
Q Consensus 747 ~l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------------DFGla~ 802 (827)
++++... ....+++.....++.++++|++|||. +.++|+||||||+||+ |||+++
T Consensus 99 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~-~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 99 VMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp EEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHT-SSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred EEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHHHHHHHh-CCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 6655432 23457888889999999999999973 2233999999999987 888887
Q ss_pred cccCCCccccccceecccccccccC
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
..... .....||+.|+|||++
T Consensus 178 ~~~~~----~~~~~g~~~y~aPE~~ 198 (287)
T 4f0f_A 178 QSVHS----VSGLLGNFQWMAPETI 198 (287)
T ss_dssp CCSSC----EECCCCCCTTSCGGGS
T ss_pred ccccc----ccccCCCccccCchhh
Confidence 54322 2234589999999974
No 229
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.78 E-value=5e-19 Score=191.90 Aligned_cols=151 Identities=26% Similarity=0.455 Sum_probs=115.5
Q ss_pred hhcccccceEecCCceEEEEEEec--------CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecC
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH--------DGIEVAIKVFHQNC-AMALKSFEAECEVMKNI-RHRNHVKRISSCSNE 743 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~ 743 (827)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+++.+|+++++++ +||||+++++++...
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 113 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 113 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccC
Confidence 367888899999999999999863 46789999997543 34567899999999999 899999999999876
Q ss_pred Cceee--eeeccC------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-
Q 047196 744 DFKAL--DCLHST------------------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF- 796 (827)
Q Consensus 744 ~~~~l--~~l~~~------------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl- 796 (827)
+..++ ++.... ...+++.+...++.++++||+||| +.+|+||||||+||+
T Consensus 114 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll 190 (334)
T 2pvf_A 114 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNVLV 190 (334)
T ss_dssp SCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEE
T ss_pred CceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCccceEEE
Confidence 65443 222110 113677888999999999999996 568999999999998
Q ss_pred ---------eecccccccCCCccc-cccceecccccccccC
Q 047196 797 ---------DFGIGRLLTGDRSMI-QTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ---------DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l 827 (827)
|||+++......... .....+|++|+|||++
T Consensus 191 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~ 231 (334)
T 2pvf_A 191 TENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEAL 231 (334)
T ss_dssp CTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHH
T ss_pred cCCCCEEEccccccccccccccccccCCCCcccceeChHHh
Confidence 999998765433221 1223478899999963
No 230
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.78 E-value=5.1e-19 Score=186.38 Aligned_cols=150 Identities=24% Similarity=0.402 Sum_probs=105.5
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ...+++.+|++++++++||||+++++++...+..++.
T Consensus 10 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 89 (278)
T 3cok_A 10 IEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLV 89 (278)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEE
T ss_pred cccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEE
Confidence 35788899999999999999986 5789999999864322 1246789999999999999999999999887755443
Q ss_pred eecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 750 CLHS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 750 ~l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
..+. ....+++.....++.++++|++||| +.+|+||||||+||+ |||+++......
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~ 166 (278)
T 3cok_A 90 LEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLH---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH 166 (278)
T ss_dssp EECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSSCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC
Confidence 2221 1245778888999999999999996 568999999999998 999998764332
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
.. .....||+.|+|||++
T Consensus 167 ~~-~~~~~~~~~y~aPE~~ 184 (278)
T 3cok_A 167 EK-HYTLCGTPNYISPEIA 184 (278)
T ss_dssp -------------------
T ss_pred Cc-ceeccCCCCcCCcchh
Confidence 21 1224589999999974
No 231
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.78 E-value=1.6e-19 Score=194.72 Aligned_cols=151 Identities=24% Similarity=0.430 Sum_probs=102.8
Q ss_pred HhhcccccceEecCCceEEEEEEecC-C---cEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc-
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLHD-G---IEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF- 745 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~~-g---~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~- 745 (827)
..++|+..+.||+|+||.||+|+... + ..||||++... .....+++.+|++++++++|||||++++++.....
T Consensus 21 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 100 (323)
T 3qup_A 21 PEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAK 100 (323)
T ss_dssp C---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---
T ss_pred ChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccc
Confidence 34678899999999999999998653 3 37999998654 23446789999999999999999999999876543
Q ss_pred -------eeeeeeccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------
Q 047196 746 -------KALDCLHST--------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------- 796 (827)
Q Consensus 746 -------~~l~~l~~~--------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------- 796 (827)
.++++.... ...+++.+...++.++++||+||| +.+|+||||||+||+
T Consensus 101 ~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~Dikp~NIli~~~~~~k 177 (323)
T 3qup_A 101 GRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVC 177 (323)
T ss_dssp ----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEE
T ss_pred cCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH---cCCcccCCCCcceEEEcCCCCEE
Confidence 223332221 014677888999999999999996 568999999999998
Q ss_pred --eecccccccCCCccc-cccceeccccccccc
Q 047196 797 --DFGIGRLLTGDRSMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 797 --DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~ 826 (827)
|||+|+......... .....+|+.|+|||+
T Consensus 178 l~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~ 210 (323)
T 3qup_A 178 VADFGLSRKIYSGDYYRQGCASKLPVKWLALES 210 (323)
T ss_dssp ECCCCC-----------------CCGGGCCHHH
T ss_pred EeeccccccccccccccccccccCcccccCchh
Confidence 999998764433221 122336889999996
No 232
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.78 E-value=1.9e-19 Score=197.68 Aligned_cols=149 Identities=29% Similarity=0.330 Sum_probs=108.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHH-HHhcCCCCceEEEeeeecCCceeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEV-MKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~-l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
++|+..++||+|+||+||+|+.+ +++.||||++.... ....+.+.+|..+ ++.++|||||++++++...+..++.
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 57889999999999999999875 58899999997543 2234556777776 5778999999999999887765543
Q ss_pred eeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 750 CLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 750 ~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
..+... ..+.......++.+++.||+||| +.+|+||||||+||| |||+++.......
T Consensus 118 ~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~ 194 (373)
T 2r5t_A 118 LDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNS 194 (373)
T ss_dssp EECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCC
T ss_pred EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEECCCCCEEEeeCccccccccCCC
Confidence 333222 23556667789999999999996 568999999999998 9999986543322
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
. ....+||+.|||||++
T Consensus 195 ~-~~~~~gt~~y~aPE~~ 211 (373)
T 2r5t_A 195 T-TSTFCGTPEYLAPEVL 211 (373)
T ss_dssp C-CCSBSCCCCCCCHHHH
T ss_pred c-cccccCCccccCHHHh
Confidence 2 2335699999999973
No 233
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.78 E-value=4.6e-19 Score=190.10 Aligned_cols=150 Identities=23% Similarity=0.438 Sum_probs=117.2
Q ss_pred hhcccccceEecCCceEEEEEEe------cCCcEEEEEEEcccc-hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCc
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL------HDGIEVAIKVFHQNC-AMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDF 745 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~ 745 (827)
.++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++++ +|||||++++++..++.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 35788889999999999999984 246889999997543 34457899999999999 99999999999987664
Q ss_pred eee--eeecc---------C-----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-
Q 047196 746 KAL--DCLHS---------T-----------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF- 796 (827)
Q Consensus 746 ~~l--~~l~~---------~-----------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl- 796 (827)
.++ ++... . ...+++.+...++.++++||+||| +.+|+||||||+||+
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLA---SKNCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCccceEEE
Confidence 443 22211 0 113778888999999999999996 568999999999998
Q ss_pred ---------eecccccccCCCccc-cccceeccccccccc
Q 047196 797 ---------DFGIGRLLTGDRSMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 797 ---------DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~ 826 (827)
|||+++......... .....||++|+|||+
T Consensus 179 ~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 218 (313)
T 1t46_A 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPES 218 (313)
T ss_dssp ETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHH
T ss_pred cCCCCEEEccccccccccccccceeccCCCCcceeeChHH
Confidence 999998775543322 223447899999996
No 234
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.78 E-value=1.3e-19 Score=191.93 Aligned_cols=150 Identities=29% Similarity=0.508 Sum_probs=119.8
Q ss_pred HhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--e
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL--D 749 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l--~ 749 (827)
..++|...+.||+|+||.||+|+.. ++..||||++.... ...+++.+|++++++++||||+++++++..+...++ +
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 89 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 89 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS-THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH-HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEE
Confidence 4567888999999999999999875 48899999997543 345779999999999999999999999987765443 2
Q ss_pred eecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 750 CLHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 750 ~l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
+... ....+++.....++.++++|++||| +.+|+||||||+||+ |||+++.......
T Consensus 90 ~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 166 (288)
T 3kfa_A 90 FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 166 (288)
T ss_dssp CCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH---HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSS
T ss_pred cCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH---HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcc
Confidence 2221 1234778888899999999999996 457999999999998 9999987765443
Q ss_pred cccccceeccccccccc
Q 047196 810 MIQTETLVTIGYMAPGL 826 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~ 826 (827)
.......+|+.|+|||+
T Consensus 167 ~~~~~~~~~~~y~aPE~ 183 (288)
T 3kfa_A 167 TAHAGAKFPIKWTAPES 183 (288)
T ss_dssp EEETTEEECGGGCCHHH
T ss_pred ccccCCccccCcCChhh
Confidence 33333457899999996
No 235
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.78 E-value=6.5e-19 Score=186.57 Aligned_cols=150 Identities=24% Similarity=0.443 Sum_probs=114.4
Q ss_pred hcccccc-eEecCCceEEEEEEec---CCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCcee-e
Q 047196 675 EKFSKEN-LIGVGSFGSVYKGRLH---DGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKA-L 748 (827)
Q Consensus 675 ~~~~~~~-~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~-l 748 (827)
++|...+ .||+|+||.||+|+.. +++.||||++... .....+++.+|++++++++||||+++++++..+...+ +
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~lv~ 88 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVM 88 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEE
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEecCCCcEEEE
Confidence 3455555 8999999999999853 5788999999764 3445678999999999999999999999995544322 2
Q ss_pred eeec---------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 749 DCLH---------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 749 ~~l~---------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
++.. .....+++.....++.++++||.||| +.+|+||||||+||+ |||+++.......
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 165 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDS 165 (287)
T ss_dssp ECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSC
T ss_pred EeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHHH---HCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcc
Confidence 2221 12345788889999999999999996 568999999999998 9999987754332
Q ss_pred cc--cccceecccccccccC
Q 047196 810 MI--QTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~--~~~~~gt~~Y~APE~l 827 (827)
.. .....+|+.|+|||++
T Consensus 166 ~~~~~~~~~~~~~y~aPE~~ 185 (287)
T 1u59_A 166 YYTARSAGKWPLKWYAPECI 185 (287)
T ss_dssp EECCCCSSCCCGGGCCHHHH
T ss_pred eeeccccccccccccCHHHh
Confidence 21 1223368999999963
No 236
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.78 E-value=2e-19 Score=192.55 Aligned_cols=150 Identities=29% Similarity=0.481 Sum_probs=111.6
Q ss_pred HhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc-----hHHHHHHHHHHHHHHhcC---CCCceEEEeeeecC
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC-----AMALKSFEAECEVMKNIR---HRNHVKRISSCSNE 743 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-----~~~~~~~~~Ei~~l~~l~---H~niv~~~~~~~~~ 743 (827)
..++|+..+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++ |||||++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 356899999999999999999996 568999999986322 111345677888777765 99999999998764
Q ss_pred Cc-----e--eeeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------e
Q 047196 744 DF-----K--ALDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------D 797 (827)
Q Consensus 744 ~~-----~--~l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------D 797 (827)
.. . ++++... ....+++.....++.++++||+||| +.+|+||||||+||+ |
T Consensus 87 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dlkp~Nil~~~~~~~kl~D 163 (308)
T 3g33_A 87 RTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH---ANCIVHRDLKPENILVTSGGTVKLAD 163 (308)
T ss_dssp CSSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCTTTEEECTTSCEEECS
T ss_pred CCCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEcCCCCEEEee
Confidence 41 1 2222221 1123788888999999999999996 567999999999998 9
Q ss_pred ecccccccCCCccccccceecccccccccC
Q 047196 798 FGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 798 FGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
||+|+....... .....||+.|+|||++
T Consensus 164 fg~a~~~~~~~~--~~~~~gt~~y~aPE~~ 191 (308)
T 3g33_A 164 FGLARIYSYQMA--LTPVVVTLWYRAPEVL 191 (308)
T ss_dssp CSCTTTSTTCCC--SGGGGCCCSSCCHHHH
T ss_pred CccccccCCCcc--cCCccccccccCchHH
Confidence 999987643322 2335689999999963
No 237
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=7.3e-19 Score=178.33 Aligned_cols=133 Identities=20% Similarity=0.196 Sum_probs=67.3
Q ss_pred cEEECCCCCCCCCCC-ccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCC
Q 047196 431 QGLYLPFNKLAGSIP-DQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSS 509 (827)
Q Consensus 431 ~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~ 509 (827)
+.|+|++|++++..| ..|..+++|+.|+|++|++++..|..|.++++|++|+|++|.+++..|..|..+++|++|+|++
T Consensus 35 ~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 114 (220)
T 2v70_A 35 AELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRS 114 (220)
T ss_dssp SEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTT
T ss_pred CEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCC
Confidence 344444444433322 2234444444444444444444444444455555555555555544444455555555555555
Q ss_pred CCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcceee
Q 047196 510 NSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEGL 563 (827)
Q Consensus 510 N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ 563 (827)
|++++..|..+..+++|+.|+|++|+|++..|..|..+++|+.|+|++|.+++.
T Consensus 115 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 115 NRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 555555555555555555555555555555555566666666666655555543
No 238
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.78 E-value=1.1e-19 Score=192.51 Aligned_cols=145 Identities=24% Similarity=0.387 Sum_probs=112.3
Q ss_pred hcccccceEecCCceEEEEEEec-CC-------cEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DG-------IEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK 746 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g-------~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~ 746 (827)
++|...+.||+|+||.||+|+.. ++ ..||+|++........+.+.+|++++++++|||||++++++..++..
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (289)
T 4fvq_A 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDEN 87 (289)
T ss_dssp GGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCC
T ss_pred hHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCC
Confidence 57888899999999999999864 33 57999999766556667899999999999999999999999876654
Q ss_pred ee--eeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------------e
Q 047196 747 AL--DCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------------D 797 (827)
Q Consensus 747 ~l--~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------------D 797 (827)
++ ++... ....+++..+..++.++++||+||| +++|+||||||+||+ |
T Consensus 88 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~D 164 (289)
T 4fvq_A 88 ILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAAAMHFLE---ENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSD 164 (289)
T ss_dssp EEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECC
T ss_pred EEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHh---hCCeECCCcCcceEEEecCCcccccccceeeecc
Confidence 44 33321 1123677788899999999999996 567999999999998 5
Q ss_pred ecccccccCCCccccccceecccccccccC
Q 047196 798 FGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 798 FGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
||+++.... .....||++|+|||++
T Consensus 165 fg~~~~~~~-----~~~~~~~~~y~aPE~~ 189 (289)
T 4fvq_A 165 PGISITVLP-----KDILQERIPWVPPECI 189 (289)
T ss_dssp CCSCTTTSC-----HHHHHHTTTTSCHHHH
T ss_pred CcccccccC-----ccccCCcCcccCHHHh
Confidence 555543321 1123479999999963
No 239
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.78 E-value=6.9e-19 Score=178.51 Aligned_cols=157 Identities=22% Similarity=0.250 Sum_probs=120.2
Q ss_pred ccEEEccCCcCccccCccccCCCCCceEeccCcccccccc-ccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 382 LENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIP-VTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 382 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
-+.+++++|.++. +|..+. ..++.|+|++|++++..| ..|..+++|+.|+|++|++++..+..|.++++|++|+|+
T Consensus 13 ~~~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls 89 (220)
T 2v70_A 13 GTTVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLT 89 (220)
T ss_dssp TTEEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECC
Confidence 3567777777764 555442 356778888888877654 346778888888888888877666677788888888888
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++..|..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..|..+..+++|+.|++++|.+++..
T Consensus 90 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c 169 (220)
T 2v70_A 90 SNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCNC 169 (220)
T ss_dssp SSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECSG
T ss_pred CCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCCC
Confidence 88887766667778888888888888888877888888888888888888888877888888888888888888888755
Q ss_pred c
Q 047196 541 P 541 (827)
Q Consensus 541 p 541 (827)
+
T Consensus 170 ~ 170 (220)
T 2v70_A 170 Y 170 (220)
T ss_dssp G
T ss_pred c
Confidence 4
No 240
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.78 E-value=8.1e-19 Score=186.53 Aligned_cols=149 Identities=20% Similarity=0.275 Sum_probs=118.9
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc---chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN---CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
.++|...+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++|+|||++++++...+..++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 93 (294)
T 2rku_A 14 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 93 (294)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEE
Confidence 357888999999999999999875 5889999998653 234567899999999999999999999999887765543
Q ss_pred eeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 750 CLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 750 ~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
..+.. ...+++.+...++.++++|++||| +.+|+||||||+||+ |||+++.......
T Consensus 94 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~ 170 (294)
T 2rku_A 94 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 170 (294)
T ss_dssp EECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc
Confidence 33322 134677788899999999999996 568999999999998 9999987653332
Q ss_pred cccccceeccccccccc
Q 047196 810 MIQTETLVTIGYMAPGL 826 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~ 826 (827)
. .....||++|+|||+
T Consensus 171 ~-~~~~~~~~~y~aPE~ 186 (294)
T 2rku_A 171 R-KKVLCGTPNYIAPEV 186 (294)
T ss_dssp C-BCCCCSCCSSCCHHH
T ss_pred c-cccccCCCCcCCcch
Confidence 2 223458999999996
No 241
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.78 E-value=5.8e-19 Score=189.16 Aligned_cols=151 Identities=23% Similarity=0.297 Sum_probs=112.0
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++..++..++.
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 467899999999999999999865 68999999986542 23457899999999999999999999999877655443
Q ss_pred eeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 750 CLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 750 ~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
..+.. ...+++.+...++.++++|++||| +.+|+||||||+||+ |||+++.......
T Consensus 113 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 189 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAH---AAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL 189 (309)
T ss_dssp EECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECSCCC---------
T ss_pred EEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc
Confidence 32221 234677888899999999999996 568999999999998 9999887654332
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
.......||+.|+|||++
T Consensus 190 ~~~~~~~~~~~y~aPE~~ 207 (309)
T 2h34_A 190 TQLGNTVGTLYYMAPERF 207 (309)
T ss_dssp -------CCGGGCCGGGT
T ss_pred ccccccCCCcCccCHHHH
Confidence 222334589999999974
No 242
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.78 E-value=7.4e-19 Score=190.60 Aligned_cols=150 Identities=21% Similarity=0.282 Sum_probs=119.4
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc---chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN---CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~---~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
.++|...+.||+|+||.||+|+.. +++.||+|++... .....+.+.+|++++++++|+|||++++++.+.+..++.
T Consensus 40 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 119 (335)
T 2owb_A 40 RRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVV 119 (335)
T ss_dssp TEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred CCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEE
Confidence 357888999999999999999875 5889999998653 234567899999999999999999999999887755543
Q ss_pred eeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 750 CLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 750 ~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
..+.. ...+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.......
T Consensus 120 ~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 196 (335)
T 2owb_A 120 LELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE 196 (335)
T ss_dssp ECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC
T ss_pred EecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc
Confidence 33222 134677788899999999999996 568999999999998 9999987653332
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
. .....||++|+|||++
T Consensus 197 ~-~~~~~gt~~y~aPE~~ 213 (335)
T 2owb_A 197 R-KKVLCGTPNYIAPEVL 213 (335)
T ss_dssp C-BCCCCSCCSSCCHHHH
T ss_pred c-ccccCCCccccCHHHh
Confidence 2 2234589999999963
No 243
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.78 E-value=2.7e-19 Score=195.44 Aligned_cols=151 Identities=27% Similarity=0.427 Sum_probs=116.5
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc-----
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF----- 745 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~----- 745 (827)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++|||||++++++.....
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 95 (351)
T 3mi9_A 16 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRC 95 (351)
T ss_dssp GGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC-------
T ss_pred ccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccC
Confidence 36788999999999999999987 578999999985432 2234578899999999999999999999876431
Q ss_pred -----eeeeeecc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccc
Q 047196 746 -----KALDCLHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802 (827)
Q Consensus 746 -----~~l~~l~~--------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~ 802 (827)
.++++... ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+|+
T Consensus 96 ~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~ 172 (351)
T 3mi9_A 96 KGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH---RNKILHRDMKAANVLITRDGVLKLADFGLAR 172 (351)
T ss_dssp -CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCE
T ss_pred CceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeCCCCCHHHEEEcCCCCEEEccchhcc
Confidence 22333221 2245788889999999999999996 568999999999998 999998
Q ss_pred cccCCCcc---ccccceecccccccccC
Q 047196 803 LLTGDRSM---IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~---~~~~~~gt~~Y~APE~l 827 (827)
.+...... .....+||++|+|||++
T Consensus 173 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 200 (351)
T 3mi9_A 173 AFSLAKNSQPNRYTNRVVTLWYRPPELL 200 (351)
T ss_dssp ECCCCSSSSCCCCCSSCSCGGGCCHHHH
T ss_pred cccccccccccccCCcccccCccCchhh
Confidence 76432211 12334589999999963
No 244
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.78 E-value=1.1e-19 Score=196.63 Aligned_cols=148 Identities=22% Similarity=0.297 Sum_probs=115.9
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceee--ee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKAL--DC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l--~~ 750 (827)
++|...+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++++ +|+||+++++++...+..++ ++
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~ 86 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLEL 86 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEEC
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEe
Confidence 5788899999999999999986 5789999999865422 34588999999999 99999999999988765444 33
Q ss_pred ecc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------------eecccccccCC
Q 047196 751 LHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------------DFGIGRLLTGD 807 (827)
Q Consensus 751 l~~--------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------------DFGla~~~~~~ 807 (827)
+.. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+|+.+...
T Consensus 87 ~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~ 163 (330)
T 2izr_A 87 LGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH---SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDP 163 (330)
T ss_dssp CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCT
T ss_pred CCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecC
Confidence 311 1245788888999999999999996 568999999999997 89999876443
Q ss_pred Cccc------cccceecccccccccC
Q 047196 808 RSMI------QTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~------~~~~~gt~~Y~APE~l 827 (827)
.... .....||+.|+|||++
T Consensus 164 ~~~~~~~~~~~~~~~gt~~y~aPE~~ 189 (330)
T 2izr_A 164 ETKKHIPYREHKSLTGTARYMSINTH 189 (330)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred CCCccccccccCCcCCCccccChHHH
Confidence 2211 1234599999999963
No 245
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.78 E-value=3e-19 Score=190.60 Aligned_cols=150 Identities=25% Similarity=0.463 Sum_probs=113.9
Q ss_pred hcccccceEecCCceEEEEEEe-----cCCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecC--Cce
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-----HDGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNE--DFK 746 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~--~~~ 746 (827)
+.|+..+.||+|+||.||+|++ .+++.||||++.... ....+.+.+|++++++++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 4578889999999999999984 368999999997442 23356799999999999999999999998775 322
Q ss_pred --eeeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eeccccccc
Q 047196 747 --ALDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLT 805 (827)
Q Consensus 747 --~l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~ 805 (827)
.+++... ....+++.+...++.+++.||+||| +.+|+||||||+||+ |||+++...
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~ 177 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLG---SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 177 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECC
T ss_pred EEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHHHhh---cCCcccCCCchheEEEcCCCCEEECccccccccc
Confidence 2333321 1234677888899999999999996 568999999999998 999998775
Q ss_pred CCCcc--ccccceecccccccccC
Q 047196 806 GDRSM--IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 806 ~~~~~--~~~~~~gt~~Y~APE~l 827 (827)
..... ......||..|+|||++
T Consensus 178 ~~~~~~~~~~~~~~~~~y~aPE~~ 201 (302)
T 4e5w_A 178 TDKEYYTVKDDRDSPVFWYAPECL 201 (302)
T ss_dssp TTCCEEECCCCTTCCGGGCCHHHH
T ss_pred CCCcceeccCCCCCCccccCCeee
Confidence 44322 12233478899999963
No 246
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.78 E-value=1.6e-19 Score=194.64 Aligned_cols=156 Identities=24% Similarity=0.346 Sum_probs=119.2
Q ss_pred hHHHHHhhcccccceEecCCceEEEEEEec------CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeee
Q 047196 668 QDLFRATEKFSKENLIGVGSFGSVYKGRLH------DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSC 740 (827)
Q Consensus 668 ~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~------~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~ 740 (827)
+++....++|...+.||+|+||.||+|+.. +++.||||++.... .....+|.+|++++++++||||+++++++
T Consensus 18 ~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~ 97 (322)
T 1p4o_A 18 DEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV 97 (322)
T ss_dssp CTTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE
T ss_pred hhhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEE
Confidence 344445678999999999999999999754 36889999987543 34456799999999999999999999999
Q ss_pred ecCCceeeeeeccCC--------------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----
Q 047196 741 SNEDFKALDCLHSTN--------------------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---- 796 (827)
Q Consensus 741 ~~~~~~~l~~l~~~~--------------------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---- 796 (827)
...+..++...+... ..+++.....++.++++||+||| +.+|+||||||+||+
T Consensus 98 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dikp~NIli~~~ 174 (322)
T 1p4o_A 98 SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLN---ANKFVHRDLAARNCMVAED 174 (322)
T ss_dssp CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCSGGGEEECTT
T ss_pred ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHH---HCCCccCCCccceEEEcCC
Confidence 876654442222211 23466778889999999999996 568999999999998
Q ss_pred ------eecccccccCCCcc-ccccceeccccccccc
Q 047196 797 ------DFGIGRLLTGDRSM-IQTETLVTIGYMAPGL 826 (827)
Q Consensus 797 ------DFGla~~~~~~~~~-~~~~~~gt~~Y~APE~ 826 (827)
|||+++........ ......||++|+|||+
T Consensus 175 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 211 (322)
T 1p4o_A 175 FTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPES 211 (322)
T ss_dssp CCEEECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHH
T ss_pred CeEEECcCccccccccccccccccCCCCCCCccChhh
Confidence 99999866433221 1223357899999996
No 247
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.78 E-value=2.4e-19 Score=190.13 Aligned_cols=148 Identities=27% Similarity=0.475 Sum_probs=105.6
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCcee-eee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKA-LDC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~-l~~ 750 (827)
.++|...+.||+|+||.||+|+... .||||++... .....+.|.+|++++++++|+|++++++++......+ +++
T Consensus 23 ~~~y~~~~~lG~G~~g~Vy~~~~~~--~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~lv~e~ 100 (289)
T 3og7_A 23 DGQITVGQRIGSGSFGTVYKGKWHG--DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYSTAPQLAIVTQW 100 (289)
T ss_dssp TTSCEEEEEEEECSSEEEEEEESSS--EEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEEC
T ss_pred ccceeeeeEecCCCCeEEEEEEEcC--ceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeeccCCccEEEEEe
Confidence 3568888999999999999998653 5999998643 3445678999999999999999999999876554322 222
Q ss_pred ec---------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc-
Q 047196 751 LH---------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM- 810 (827)
Q Consensus 751 l~---------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~- 810 (827)
+. .....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++........
T Consensus 101 ~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~ 177 (289)
T 3og7_A 101 CEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH---AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSH 177 (289)
T ss_dssp CCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEETTTEEEECCCC------------
T ss_pred cCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---hCCcccccCccceEEECCCCCEEEccceeccccccccccc
Confidence 21 22345778888999999999999996 568999999999998 99999865432221
Q ss_pred ccccceeccccccccc
Q 047196 811 IQTETLVTIGYMAPGL 826 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~ 826 (827)
......||+.|+|||+
T Consensus 178 ~~~~~~gt~~y~aPE~ 193 (289)
T 3og7_A 178 QFEQLSGSILWMAPEV 193 (289)
T ss_dssp ------CCCTTCCHHH
T ss_pred cccccCCCccccCchh
Confidence 1222458999999996
No 248
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.78 E-value=2.2e-19 Score=197.27 Aligned_cols=147 Identities=24% Similarity=0.404 Sum_probs=109.7
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC------
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED------ 744 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~------ 744 (827)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+++.+|++++++++|||||++++++....
T Consensus 24 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 103 (367)
T 1cm8_A 24 RAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFT 103 (367)
T ss_dssp BSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCC
T ss_pred cceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCc
Confidence 35688889999999999999986 46999999998543 2344567899999999999999999999986643
Q ss_pred --ceeeeeecc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 745 --FKALDCLHS------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 745 --~~~l~~l~~------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
+.+++++.. ....+++.....++.|+++||+||| +.+|+||||||+||+ |||+|+....
T Consensus 104 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~ 180 (367)
T 1cm8_A 104 DFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH---AAGIIHRDLKPGNLAVNEDCELKILDFGLARQADS 180 (367)
T ss_dssp CCEEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCS
T ss_pred eEEEEEecCCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCHHHEEEcCCCCEEEEeeeccccccc
Confidence 223333211 1235677778889999999999996 568999999999998 9999987543
Q ss_pred CCccccccceecccccccccC
Q 047196 807 DRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~l 827 (827)
. .+..+||++|+|||++
T Consensus 181 ~----~~~~~~t~~y~aPE~~ 197 (367)
T 1cm8_A 181 E----MTGYVVTRWYRAPEVI 197 (367)
T ss_dssp S----CCSSCSCGGGCCTHHH
T ss_pred c----cCcCcCCCCcCCHHHH
Confidence 2 2334689999999963
No 249
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.78 E-value=3.7e-19 Score=195.36 Aligned_cols=150 Identities=25% Similarity=0.366 Sum_probs=116.7
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-------
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNED------- 744 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~------- 744 (827)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++|||||++++++....
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 457999999999999999999864 68899999997432 344578999999999999999999999986543
Q ss_pred ceeeeeecc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 745 FKALDCLHS------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 745 ~~~l~~l~~------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+.+++++.. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 106 ~iv~e~~~~~L~~~l~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 182 (364)
T 3qyz_A 106 YIVQDLMETDLYKLLKTQHLSNDHICYFLYQILRGLKYIH---SANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDH 182 (364)
T ss_dssp EEEEECCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGG
T ss_pred EEEEcccCcCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCC
Confidence 122222221 1234677888899999999999996 568999999999998 999998764332
Q ss_pred ccc--cccceeccccccccc
Q 047196 809 SMI--QTETLVTIGYMAPGL 826 (827)
Q Consensus 809 ~~~--~~~~~gt~~Y~APE~ 826 (827)
... ....+||++|+|||+
T Consensus 183 ~~~~~~~~~~gt~~y~aPE~ 202 (364)
T 3qyz_A 183 DHTGFLTEYVATRWYRAPEI 202 (364)
T ss_dssp CBCCTTCCCCSCGGGCCHHH
T ss_pred CccccccccccccCCCCCHH
Confidence 211 233468999999996
No 250
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.78 E-value=1.8e-19 Score=205.71 Aligned_cols=149 Identities=26% Similarity=0.446 Sum_probs=119.2
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
.++|...++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++......++.
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 357888999999999999999875 78999999986432 23456799999999999999999999999887755543
Q ss_pred eecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccC
Q 047196 750 CLHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTG 806 (827)
Q Consensus 750 ~l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~ 806 (827)
..+. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+|+....
T Consensus 105 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~ 181 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEA 181 (484)
T ss_dssp ECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCC
T ss_pred EecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccc
Confidence 3222 1235677888899999999999996 568999999999998 9999987654
Q ss_pred CCccccccceecccccccccC
Q 047196 807 DRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~l 827 (827)
... ....+||++|+|||++
T Consensus 182 ~~~--~~~~~gt~~y~aPE~~ 200 (484)
T 3nyv_A 182 SKK--MKDKIGTAYYIAPEVL 200 (484)
T ss_dssp CCS--HHHHTTGGGTCCHHHH
T ss_pred ccc--cccCCCCccccCceee
Confidence 332 2234599999999973
No 251
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.78 E-value=7.8e-20 Score=197.36 Aligned_cols=148 Identities=26% Similarity=0.376 Sum_probs=109.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchH-HHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAM-ALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~-~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
++|...+.||+|+||.||+|+.. +|+.||||++...... ....+.+|++++++++|||||++++++..+...++...+
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46888899999999999999875 6899999998654322 222456899999999999999999999877654442222
Q ss_pred c----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcccc
Q 047196 753 S----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQ 812 (827)
Q Consensus 753 ~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~ 812 (827)
. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++........ .
T Consensus 82 ~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~-~ 157 (324)
T 3mtl_A 82 LDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKT-Y 157 (324)
T ss_dssp CSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEEESSCCGGGEEECTTCCEEECSSSEEECC--------
T ss_pred cccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccc-c
Confidence 1 1234677788889999999999996 568999999999998 99999865433221 2
Q ss_pred ccceeccccccccc
Q 047196 813 TETLVTIGYMAPGL 826 (827)
Q Consensus 813 ~~~~gt~~Y~APE~ 826 (827)
....||++|+|||+
T Consensus 158 ~~~~~t~~y~aPE~ 171 (324)
T 3mtl_A 158 DNEVVTLWYRPPDI 171 (324)
T ss_dssp -----CGGGCCHHH
T ss_pred ccccCcccccChhh
Confidence 23458999999996
No 252
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.78 E-value=4.7e-19 Score=196.82 Aligned_cols=147 Identities=25% Similarity=0.393 Sum_probs=115.8
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC--c--eee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNED--F--KAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~--~--~~l 748 (827)
++|...++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++.... . .++
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 56888999999999999999875 58999999997543 233567889999999999999999999987654 2 223
Q ss_pred eeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------------eeccccc
Q 047196 749 DCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGRL 803 (827)
Q Consensus 749 ~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------------DFGla~~ 803 (827)
+++... ...+++.....++.+++.||+||| +.+|+||||||+||+ |||+|+.
T Consensus 89 e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~ 165 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLR---ENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARE 165 (396)
T ss_dssp CCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEE
T ss_pred ecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEEECCcCHHHEEEeecCCCceeEEEecCCCceE
Confidence 333211 112788889999999999999996 568999999999996 9999987
Q ss_pred ccCCCccccccceeccccccccc
Q 047196 804 LTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 804 ~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
...... .....||+.|+|||+
T Consensus 166 ~~~~~~--~~~~~gt~~y~aPE~ 186 (396)
T 4eut_A 166 LEDDEQ--FVSLYGTEEYLHPDM 186 (396)
T ss_dssp CCCGGG--SSCSSSCCTTCCHHH
T ss_pred ccCCCc--cccccCCccccCHHH
Confidence 654322 223458999999996
No 253
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.78 E-value=8.5e-20 Score=197.15 Aligned_cols=150 Identities=25% Similarity=0.413 Sum_probs=110.7
Q ss_pred hcccccceEecCCceEEEEEEec-CCcE----EEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCcee-
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIE----VAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKA- 747 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~- 747 (827)
++|...+.||+|+||.||+|+.. +|+. ||+|++.... ....+++.+|+.++++++|||||+++++|.+....+
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v 92 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLV 92 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEECBSSEEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCccEEE
Confidence 46888899999999999999864 4543 7888875432 223356788999999999999999999987554322
Q ss_pred eeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 748 LDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 748 l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
++++.. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+|+......
T Consensus 93 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 169 (325)
T 3kex_A 93 TQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLE---EHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDD 169 (325)
T ss_dssp EECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHHHHH---HTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCT
T ss_pred EEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHHHHH---hCCCCCCccchheEEECCCCeEEECCCCcccccCccc
Confidence 222221 1235667778899999999999996 567999999999998 999999875443
Q ss_pred ccc-cccceecccccccccC
Q 047196 809 SMI-QTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~-~~~~~gt~~Y~APE~l 827 (827)
... .....||++|+|||++
T Consensus 170 ~~~~~~~~~~~~~y~aPE~~ 189 (325)
T 3kex_A 170 KQLLYSEAKTPIKWMALESI 189 (325)
T ss_dssp TCCC-----CCTTTSCHHHH
T ss_pred ccccccCCCCcccccChHHh
Confidence 322 2233478899999963
No 254
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.78 E-value=6.8e-19 Score=184.62 Aligned_cols=148 Identities=26% Similarity=0.443 Sum_probs=106.7
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccch----HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCA----MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL-- 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~----~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l-- 748 (827)
++|+..+.||+|+||.||+|+.. |+.||||++..... ...+.+.+|++++++++||||+++++++..++..++
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 57888899999999999999975 78999999864322 234678999999999999999999999987765444
Q ss_pred eeecc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------------eeccccc
Q 047196 749 DCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------------DFGIGRL 803 (827)
Q Consensus 749 ~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------------DFGla~~ 803 (827)
++... ....+++.....++.++++|++|||.....+|+||||||+||+ |||+++.
T Consensus 86 e~~~~~~L~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~ 165 (271)
T 3dtc_A 86 EFARGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLARE 165 (271)
T ss_dssp ECCTTEEHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC---
T ss_pred EcCCCCCHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcccc
Confidence 33221 1345778888999999999999998644445999999999997 7888876
Q ss_pred ccCCCccccccceeccccccccc
Q 047196 804 LTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 804 ~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
...... ....||++|+|||+
T Consensus 166 ~~~~~~---~~~~~~~~y~aPE~ 185 (271)
T 3dtc_A 166 WHRTTK---MSAAGAYAWMAPEV 185 (271)
T ss_dssp -------------CCGGGSCHHH
T ss_pred cccccc---cCCCCccceeCHHH
Confidence 543222 23458999999996
No 255
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.78 E-value=2.7e-19 Score=206.37 Aligned_cols=151 Identities=26% Similarity=0.446 Sum_probs=116.8
Q ss_pred HhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce-eeeee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK-ALDCL 751 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~-~l~~l 751 (827)
..++|...+.||+|+||.||+|++.++..||||++.... ...++|.+|+++|++++|+|||++++++.++... +++++
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~lv~e~~ 343 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYM 343 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEEECCC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEEeeccceEeeehh
Confidence 345688889999999999999999888889999997543 2346799999999999999999999998764432 22332
Q ss_pred ccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 752 HST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 752 ~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
... ...+.+.+...|+.++++||+||| +++|+||||||+||| |||+++.........
T Consensus 344 ~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 420 (535)
T 2h8h_A 344 SKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTA 420 (535)
T ss_dssp TTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHT
T ss_pred cCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceec
Confidence 211 134677888999999999999996 568999999999998 999998764322111
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
.....++..|+|||++
T Consensus 421 ~~~~~~~~~y~aPE~~ 436 (535)
T 2h8h_A 421 RQGAKFPIKWTAPEAA 436 (535)
T ss_dssp TCSTTSCGGGSCHHHH
T ss_pred ccCCcCcccccCHHHh
Confidence 2223368899999963
No 256
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.78 E-value=6.1e-19 Score=190.09 Aligned_cols=148 Identities=22% Similarity=0.367 Sum_probs=117.1
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch------HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA------MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK 746 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~ 746 (827)
.+.|...+.||+|+||.||+|+.. +|+.||||++..... ...+++.+|++++++++||||+++++++......
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356888999999999999999875 689999999865321 1356799999999999999999999999887655
Q ss_pred eeeeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------------eecccc
Q 047196 747 ALDCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGR 802 (827)
Q Consensus 747 ~l~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------------DFGla~ 802 (827)
++...+.. ...+++.....++.++++||+||| +.+|+||||||+||+ |||+++
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH---~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~ 167 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAH 167 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCE
T ss_pred EEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCChHHEEEecCCCCcCCEEEccCccce
Confidence 44333221 234567778899999999999996 568999999999997 899887
Q ss_pred cccCCCccccccceeccccccccc
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
....... .....||+.|+|||+
T Consensus 168 ~~~~~~~--~~~~~gt~~y~aPE~ 189 (321)
T 2a2a_A 168 EIEDGVE--FKNIFGTPEFVAPEI 189 (321)
T ss_dssp ECCTTCC--CCCCCSCGGGCCHHH
T ss_pred ecCcccc--ccccCCCCCccCccc
Confidence 7654322 123458999999996
No 257
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.78 E-value=4.1e-19 Score=196.45 Aligned_cols=146 Identities=24% Similarity=0.347 Sum_probs=111.2
Q ss_pred HHhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC------
Q 047196 672 RATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED------ 744 (827)
Q Consensus 672 ~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~------ 744 (827)
...++|...+.||+|+||.||+|+. .+|+.||||++..... ...+|+++++.++|||||++++++....
T Consensus 4 ~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 4 TSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp --CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 3456899999999999999999986 5799999999865422 2347999999999999999999884421
Q ss_pred --------------------------------ce--eeeeecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047196 745 --------------------------------FK--ALDCLHS-----------TNCSLNIFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 745 --------------------------------~~--~l~~l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~ 779 (827)
+. +++++.. ....+.+.....++.++++||+|||
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH- 158 (383)
T 3eb0_A 80 PQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH- 158 (383)
T ss_dssp ------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred cccccccccccccccccccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH-
Confidence 11 2222221 1245677788899999999999996
Q ss_pred cCCCCeEEccCCCccee-----------eecccccccCCCccccccceeccccccccc
Q 047196 780 SHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 780 ~h~~~iiHrDlK~~NIl-----------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
+.+|+||||||+||+ |||+|+........ ....||+.|+|||+
T Consensus 159 --~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~--~~~~~t~~y~aPE~ 212 (383)
T 3eb0_A 159 --SLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEPS--VAYICSRFYRAPEL 212 (383)
T ss_dssp --TTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTSCC--CCCCCCSSCCCHHH
T ss_pred --HCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCCCC--cCcccCCCccCHHH
Confidence 678999999999998 99999876544322 33458999999996
No 258
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.78 E-value=1e-18 Score=184.73 Aligned_cols=147 Identities=24% Similarity=0.358 Sum_probs=115.0
Q ss_pred HhhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l 748 (827)
..++|+..+.||+|+||.||+|+.. +++.||||++... ......++.+|+..+.++ +|||||++++++.+.+..++
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~l 88 (289)
T 1x8b_A 9 YTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLI 88 (289)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEE
T ss_pred ccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence 3467999999999999999999875 7899999998753 233456788999999999 99999999999988776554
Q ss_pred eeeccCC--------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------------
Q 047196 749 DCLHSTN--------------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------------ 796 (827)
Q Consensus 749 ~~l~~~~--------------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------------ 796 (827)
...+... ..+++.....++.++++||+||| +.+|+||||||+||+
T Consensus 89 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~ 165 (289)
T 1x8b_A 89 QNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDD 165 (289)
T ss_dssp EEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEC----------------
T ss_pred EEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeecCCCHHHEEEcCCCCCccccccccccc
Confidence 3333221 34677788899999999999996 568999999999987
Q ss_pred -----------eecccccccCCCccccccceecccccccccC
Q 047196 797 -----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 -----------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||.++..... ....||+.|+|||++
T Consensus 166 ~~~~~~~~kl~Dfg~~~~~~~~-----~~~~gt~~y~aPE~~ 202 (289)
T 1x8b_A 166 WASNKVMFKIGDLGHVTRISSP-----QVEEGDSRFLANEVL 202 (289)
T ss_dssp ----CCCEEECCCTTCEETTCS-----CCCCCCGGGCCHHHH
T ss_pred ccCCceEEEEcccccccccCCc-----cccCCCccccChhHh
Confidence 55655544322 123489999999963
No 259
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.78 E-value=8.3e-19 Score=184.94 Aligned_cols=147 Identities=27% Similarity=0.392 Sum_probs=113.6
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++||||+++++++.+....++.
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 467899999999999999999865 578999999864321 2245789999999999999999999999887655443
Q ss_pred eeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 750 CLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 750 ~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
..+.. ...+++.....++.+++.|++||| +.+|+||||||+||+ |||++........
T Consensus 88 ~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~ 164 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRR 164 (279)
T ss_dssp ECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTCEECCCCGGGEEECTTSCEEECSCCEESCC-----
T ss_pred EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCEecccCChHhEEEcCCCCEEEEeccccccCCcccc
Confidence 32221 134677788899999999999996 678999999999998 9998865433221
Q ss_pred cccccceeccccccccc
Q 047196 810 MIQTETLVTIGYMAPGL 826 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~ 826 (827)
....||+.|+|||+
T Consensus 165 ---~~~~~~~~y~aPE~ 178 (279)
T 3fdn_A 165 ---TDLCGTLDYLPPEM 178 (279)
T ss_dssp ------CCCCTTCCHHH
T ss_pred ---cccCCCCCccCHhH
Confidence 23458999999996
No 260
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.78 E-value=4.9e-19 Score=194.01 Aligned_cols=176 Identities=23% Similarity=0.211 Sum_probs=94.0
Q ss_pred cEEEccCCcCccccCccccCCCCCceEeccCcccccccccccc-CCCCCcEEECCCCCCCCCCCccccccccccEEecCC
Q 047196 383 ENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFG-RLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAG 461 (827)
Q Consensus 383 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 461 (827)
+.+++++++++. +|..+. +.++.|+|++|++++..+..|. ++++|+.|+|++|++++..|..|.++++|+.|+|++
T Consensus 21 ~~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 445555555553 343322 3355556666655555555554 555566666665655554455555555566666666
Q ss_pred CcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccc---cccccCceEEcccceeee
Q 047196 462 NKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDI---GNLRVVIGINLSRNNFSG 538 (827)
Q Consensus 462 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~---~~l~~L~~L~Ls~N~l~g 538 (827)
|++++..+..|.++++|++|+|++|.+++..|..|.++++|+.|+|++|++++..+..+ ..++.|+.|||++|+|++
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 177 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKK 177 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCc
Confidence 65555444455555556666666665555555555555555555555555554333333 345555555555555554
Q ss_pred cccccccCCCC--CCEEECCCCcce
Q 047196 539 DIPSTIGDLKD--LQNISLACNGLE 561 (827)
Q Consensus 539 ~ip~~~~~l~~--L~~L~Ls~N~l~ 561 (827)
..+..+..++. ++.|+|++|.+.
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~ 202 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLE 202 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEE
T ss_pred cCHHHhhhccHhhcceEEecCCCcc
Confidence 44444555444 245555555543
No 261
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.77 E-value=6.9e-19 Score=190.65 Aligned_cols=151 Identities=25% Similarity=0.428 Sum_probs=116.2
Q ss_pred HhhcccccceEecCCceEEEEEEec-CC-----cEEEEEEEcccc-hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCC
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DG-----IEVAIKVFHQNC-AMALKSFEAECEVMKNI-RHRNHVKRISSCSNED 744 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g-----~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~ 744 (827)
..++|...+.||+|+||.||+|+.. ++ ..||||++.... ....+.+.+|+++++++ +|||||++++++...+
T Consensus 44 ~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 123 (333)
T 2i1m_A 44 PRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGG 123 (333)
T ss_dssp CTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS
T ss_pred CHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCC
Confidence 3467888899999999999999864 23 479999997543 34557799999999999 8999999999998766
Q ss_pred ceeeeeeccC------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----
Q 047196 745 FKALDCLHST------------------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---- 796 (827)
Q Consensus 745 ~~~l~~l~~~------------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---- 796 (827)
..++...+.. ...+++.....++.++++||+||| +.+|+||||||+||+
T Consensus 124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~ 200 (333)
T 2i1m_A 124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLA---SKNCIHRDVAARNVLLTNG 200 (333)
T ss_dssp SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGCEEEGG
T ss_pred ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHh---cCCcccCCcccceEEECCC
Confidence 5444222211 123567778899999999999996 568999999999998
Q ss_pred ------eecccccccCCCccc-cccceeccccccccc
Q 047196 797 ------DFGIGRLLTGDRSMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 797 ------DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~ 826 (827)
|||+++......... .....||++|+|||+
T Consensus 201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 237 (333)
T 2i1m_A 201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPES 237 (333)
T ss_dssp GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHH
T ss_pred CeEEECccccccccccccceeecCCCCCCccccCHHH
Confidence 999998765443221 223447899999996
No 262
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.77 E-value=6.8e-19 Score=188.10 Aligned_cols=148 Identities=28% Similarity=0.403 Sum_probs=114.2
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
.++|...+.||+|+||.||+|+.. +|+.||||++........+.+.+|++++++++||||+++++++......++...+
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 87 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQL 87 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEc
Confidence 457888999999999999999865 6899999999765444456789999999999999999999999877655443322
Q ss_pred cC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCCCc
Q 047196 753 ST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDRS 809 (827)
Q Consensus 753 ~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~~~ 809 (827)
.. ...+++.....++.++++|++||| +.+|+||||||+||+ |||+++......
T Consensus 88 ~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~- 163 (304)
T 2jam_A 88 VSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLH---ENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI- 163 (304)
T ss_dssp CCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT-
T ss_pred CCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc-
Confidence 22 134567778889999999999996 568999999999987 899887543221
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
.....||++|+|||++
T Consensus 164 --~~~~~~~~~y~aPE~~ 179 (304)
T 2jam_A 164 --MSTACGTPGYVAPEVL 179 (304)
T ss_dssp --THHHHSCCCBCCTTTB
T ss_pred --cccccCCCCccChHHh
Confidence 1223589999999974
No 263
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.77 E-value=3.7e-19 Score=197.37 Aligned_cols=144 Identities=26% Similarity=0.412 Sum_probs=111.1
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc------e--
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF------K-- 746 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~------~-- 746 (827)
.+|...++||+|+||.||+|+...+..||||++..... ...+|+++++.++|||||++++++..... .
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l 115 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNL 115 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEE
Confidence 46888999999999999999987767799998854322 22479999999999999999999854321 2
Q ss_pred eeeeecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecccccc
Q 047196 747 ALDCLHS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLL 804 (827)
Q Consensus 747 ~l~~l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~~~ 804 (827)
+++++.. ....+.+.....++.|+++||+||| +.+|+||||||+||+ |||+|+..
T Consensus 116 v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~ 192 (394)
T 4e7w_A 116 VLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIH---SIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL 192 (394)
T ss_dssp EEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEETTTTEEEECCCTTCEEC
T ss_pred EeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccc
Confidence 2233221 1345677778889999999999996 568999999999998 99999876
Q ss_pred cCCCccccccceecccccccccC
Q 047196 805 TGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 805 ~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
..... ....+||++|+|||++
T Consensus 193 ~~~~~--~~~~~~t~~y~aPE~~ 213 (394)
T 4e7w_A 193 IAGEP--NVSYICSRYYRAPELI 213 (394)
T ss_dssp CTTCC--CCSSCSCGGGCCHHHH
T ss_pred cCCCC--CcccccCcCccCHHHH
Confidence 44332 2334689999999963
No 264
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.77 E-value=1.3e-18 Score=182.93 Aligned_cols=151 Identities=22% Similarity=0.325 Sum_probs=119.0
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l 751 (827)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+....++...
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 467889999999999999999875 68999999986432 3345789999999999999999999999987765444222
Q ss_pred cc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc-
Q 047196 752 HS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM- 810 (827)
Q Consensus 752 ~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~- 810 (827)
+. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++........
T Consensus 86 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 162 (276)
T 2yex_A 86 YCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRER 162 (276)
T ss_dssp CCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEEC
T ss_pred ecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchh
Confidence 21 1234678888999999999999996 568999999999998 99999876433221
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
......||+.|+|||++
T Consensus 163 ~~~~~~~~~~y~aPE~~ 179 (276)
T 2yex_A 163 LLNKMCGTLPYVAPELL 179 (276)
T ss_dssp CBCCCCSCGGGCCGGGG
T ss_pred cccCCccccCccChHHH
Confidence 12234589999999974
No 265
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.77 E-value=6.5e-19 Score=198.92 Aligned_cols=144 Identities=28% Similarity=0.435 Sum_probs=111.8
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-cee--eee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED-FKA--LDC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-~~~--l~~ 750 (827)
.++|...+.||+|+||.||+|++. |+.||||+++... ..+.|.+|++++++++|||||+++++|...+ ..+ +++
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~ 268 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 268 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEEC
T ss_pred hHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEe
Confidence 356888899999999999999876 7899999997543 4567999999999999999999999987654 223 333
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
+... ...+++.....++.++++||+||| +.+|+||||||+||| |||+++......
T Consensus 269 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~-- 343 (450)
T 1k9a_A 269 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 343 (450)
T ss_dssp CTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC-----
T ss_pred cCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc--
Confidence 3221 112577788899999999999996 568999999999998 999998543221
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
....+|+.|+|||++
T Consensus 344 --~~~~~~~~y~aPE~~ 358 (450)
T 1k9a_A 344 --DTGKLPVKWTAPEAL 358 (450)
T ss_dssp -----CCCTTTSCHHHH
T ss_pred --cCCCCCcceeCHHHh
Confidence 122478899999963
No 266
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1.4e-18 Score=176.35 Aligned_cols=151 Identities=25% Similarity=0.324 Sum_probs=79.9
Q ss_pred cEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCC
Q 047196 383 ENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGN 462 (827)
Q Consensus 383 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 462 (827)
+.+++++++++ .+|..+. ++|+.|++++|++++..+..|..+++|++|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 45666666666 3444332 45666666666666555555666666666666666666555555555555555555555
Q ss_pred cccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEccccee
Q 047196 463 KFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNF 536 (827)
Q Consensus 463 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l 536 (827)
+++...+..|..+++|++|+|++|.+++..|..|..+++|+.|+|++|++++..+..+..++.|+.|++++|.+
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 164 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPF 164 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCE
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCc
Confidence 55543333345555555555555555554444444444444444444444443333333333333344443333
No 267
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.77 E-value=1e-18 Score=188.79 Aligned_cols=149 Identities=27% Similarity=0.432 Sum_probs=116.5
Q ss_pred hcccccceEecCCceEEEEEEe-----cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC----c
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-----HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED----F 745 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-----~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~----~ 745 (827)
++|+..+.||+|+||.||+|++ .+|+.||||++........+.+.+|++++++++|||||++++++...+ +
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 120 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLK 120 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCE
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceE
Confidence 4678889999999999999984 368999999998766666778999999999999999999999886543 2
Q ss_pred eeeeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 746 KALDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 746 ~~l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
.++++... ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++....
T Consensus 121 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~ 197 (326)
T 2w1i_A 121 LIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLG---TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQ 197 (326)
T ss_dssp EEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCS
T ss_pred EEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCEeccCCCcceEEEcCCCcEEEecCcchhhccc
Confidence 23333321 1234778888999999999999996 568999999999998 9999987754
Q ss_pred CCccc--cccceeccccccccc
Q 047196 807 DRSMI--QTETLVTIGYMAPGL 826 (827)
Q Consensus 807 ~~~~~--~~~~~gt~~Y~APE~ 826 (827)
..... .....++..|+|||+
T Consensus 198 ~~~~~~~~~~~~~~~~y~aPE~ 219 (326)
T 2w1i_A 198 DKEYYKVKEPGESPIFWYAPES 219 (326)
T ss_dssp SCSEEECSSCCSCCGGGCCHHH
T ss_pred cccccccccCCCCceeEECchh
Confidence 43221 122336888999996
No 268
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.77 E-value=1.5e-18 Score=176.04 Aligned_cols=153 Identities=23% Similarity=0.279 Sum_probs=107.4
Q ss_pred ceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCC
Q 047196 407 LLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSN 486 (827)
Q Consensus 407 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N 486 (827)
+.+++++|.++. +|..+. ++|+.|+|++|++++..+..|..+++|+.|+|++|++++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~~-iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLTE-IPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCSS-CCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcCc-CCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 466777777763 444433 56777777777777665666777777777777777777666777777777777777777
Q ss_pred cccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCccee
Q 047196 487 RLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGLEG 562 (827)
Q Consensus 487 ~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g 562 (827)
.+++..+..|.++++|+.|+|++|++++..|..+..++.|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 166 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFIC 166 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCC
Confidence 7776666666777777777777777777767777777777777777777776666667777777777777777654
No 269
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.77 E-value=5.7e-19 Score=189.77 Aligned_cols=150 Identities=25% Similarity=0.334 Sum_probs=111.2
Q ss_pred hcccc-cceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceeeeee
Q 047196 675 EKFSK-ENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 675 ~~~~~-~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l~~l 751 (827)
+.|.. .++||+|+||.||+|+. .+|+.||||++........+.+.+|++++.++ +|||||++++++...+..++...
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e 91 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFE 91 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEE
Confidence 34665 37899999999999985 46899999999765444567789999999995 79999999999988775554333
Q ss_pred ccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCCC
Q 047196 752 HST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDR 808 (827)
Q Consensus 752 ~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~~ 808 (827)
+.. ...+++.....++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 92 ~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~ 168 (316)
T 2ac3_A 92 KMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH---NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNG 168 (316)
T ss_dssp CCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC------
T ss_pred cCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCC
Confidence 322 134677778889999999999996 468999999999998 899887654221
Q ss_pred cc------ccccceecccccccccC
Q 047196 809 SM------IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~------~~~~~~gt~~Y~APE~l 827 (827)
.. .....+||+.|+|||++
T Consensus 169 ~~~~~~~~~~~~~~gt~~y~aPE~~ 193 (316)
T 2ac3_A 169 DCSPISTPELLTPCGSAEYMAPEVV 193 (316)
T ss_dssp -------------CCSGGGCCHHHH
T ss_pred ccccccccccccccCCcCccChHHh
Confidence 10 11223489999999963
No 270
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.77 E-value=2.9e-19 Score=191.78 Aligned_cols=157 Identities=19% Similarity=0.316 Sum_probs=117.9
Q ss_pred hhHHHHHhhcccccceEecCCceEEEEEEecCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcC--CCCceEEEeeeec
Q 047196 667 YQDLFRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIR--HRNHVKRISSCSN 742 (827)
Q Consensus 667 ~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~--H~niv~~~~~~~~ 742 (827)
++.+....++|...+.||+|+||.||+|+..+|+.||||++... .....+.+.+|++++++++ |+|++++++++..
T Consensus 20 ~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~ 99 (313)
T 3cek_A 20 FQSMSVKGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 99 (313)
T ss_dssp CCEEEETTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC
T ss_pred eeeeeeccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec
Confidence 33333445679999999999999999999888999999998643 3445678999999999998 4999999999988
Q ss_pred CCceeeeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------eecccccc
Q 047196 743 EDFKALDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------DFGIGRLL 804 (827)
Q Consensus 743 ~~~~~l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------DFGla~~~ 804 (827)
....++..... ....+++..+..++.++++||+||| +.+|+||||||+||+ |||+++..
T Consensus 100 ~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~ 176 (313)
T 3cek_A 100 DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIH---QHGIVHSDLKPANFLIVDGMLKLIDFGIANQM 176 (313)
T ss_dssp SSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEEETTEEEECCCSSSCC-
T ss_pred CCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCcccEEEECCeEEEeeccccccc
Confidence 77654432221 1235677888899999999999996 568999999999998 99999876
Q ss_pred cCCCccc-cccceeccccccccc
Q 047196 805 TGDRSMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 805 ~~~~~~~-~~~~~gt~~Y~APE~ 826 (827)
....... .....||+.|+|||+
T Consensus 177 ~~~~~~~~~~~~~gt~~y~aPE~ 199 (313)
T 3cek_A 177 QPDTTSVVKDSQVGTVNYMPPEA 199 (313)
T ss_dssp -------------CCGGGCCHHH
T ss_pred cCccccccccCCCCCCCcCCHHH
Confidence 5433221 223458999999996
No 271
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.3e-18 Score=184.46 Aligned_cols=168 Identities=29% Similarity=0.398 Sum_probs=116.7
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|+.|++++|.++.. + .+..+++|+.|++++|++++..+ +..+++|+.|++++|++++ +| .+..+++|+.|+++
T Consensus 47 ~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECC
Confidence 566677777766643 3 36667777777777777776544 6777777777777777764 23 36677777777777
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++. +.+..+++|++|++++|.+++. ..+..+++|+.|++++|.+++..| +..++.|+.|++++|+|++ +
T Consensus 121 ~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~~-l 193 (291)
T 1h6t_A 121 HNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L 193 (291)
T ss_dssp TSCCCCC--GGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C
T ss_pred CCcCCCC--hhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCCC-C
Confidence 7777642 3566777777777777777764 456777777777777777776554 6777777777777777775 3
Q ss_pred cccccCCCCCCEEECCCCccee
Q 047196 541 PSTIGDLKDLQNISLACNGLEG 562 (827)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~g 562 (827)
| .+..+++|+.|++++|+++.
T Consensus 194 ~-~l~~l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 194 R-ALAGLKNLDVLELFSQECLN 214 (291)
T ss_dssp G-GGTTCTTCSEEEEEEEEEEC
T ss_pred h-hhccCCCCCEEECcCCcccC
Confidence 3 37777777777777777765
No 272
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.77 E-value=3e-19 Score=209.02 Aligned_cols=143 Identities=24% Similarity=0.456 Sum_probs=106.9
Q ss_pred eEecCCceEEEEEEec---CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce-eeeeecc---
Q 047196 682 LIGVGSFGSVYKGRLH---DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK-ALDCLHS--- 753 (827)
Q Consensus 682 ~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~-~l~~l~~--- 753 (827)
.||+|+||.||+|.++ ++..||||+++... ....++|.+|++++++++|||||+++++|..+... +++++..
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~~~~~lv~E~~~~g~L 422 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPL 422 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEESSSEEEEEECCTTCBH
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEeccCCeEEEEEeCCCCcH
Confidence 7999999999999764 46789999997543 33467899999999999999999999999765432 2232221
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcccc--ccc
Q 047196 754 ------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQ--TET 815 (827)
Q Consensus 754 ------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~--~~~ 815 (827)
....+++.+...++.++++||+||| +.+|+||||||+||| |||+|+.......... ...
T Consensus 423 ~~~l~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~ 499 (613)
T 2ozo_A 423 HKFLVGKREEIPVSNVAELLHQVSMGMKYLE---EKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAG 499 (613)
T ss_dssp HHHHTTCTTTSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC------------
T ss_pred HHHHhhccCCCCHHHHHHHHHHHHHHHHHHH---HCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccCC
Confidence 2345788889999999999999996 568999999999998 9999987654332211 122
Q ss_pred eecccccccccC
Q 047196 816 LVTIGYMAPGLL 827 (827)
Q Consensus 816 ~gt~~Y~APE~l 827 (827)
.+|+.|||||++
T Consensus 500 ~~~~~y~APE~~ 511 (613)
T 2ozo_A 500 KWPLKWYAPECI 511 (613)
T ss_dssp --CCTTSCHHHH
T ss_pred CCccceeCHhhh
Confidence 357899999974
No 273
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.77 E-value=1.2e-18 Score=189.02 Aligned_cols=151 Identities=27% Similarity=0.404 Sum_probs=110.1
Q ss_pred HhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhc--CCCCceEEEeeeecC----Cce
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNI--RHRNHVKRISSCSNE----DFK 746 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l--~H~niv~~~~~~~~~----~~~ 746 (827)
..++|+..+.||+|+||.||+|+.. |+.||||++.... ...+.+|.+++... +|||||++++++... ...
T Consensus 35 ~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 110 (337)
T 3mdy_A 35 IAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110 (337)
T ss_dssp HHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEE
T ss_pred cccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCce
Confidence 3467999999999999999999876 8899999986432 23345555555554 999999999998776 333
Q ss_pred ee--eeeccC-------CCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEccCCCccee----------eecccc
Q 047196 747 AL--DCLHST-------NCSLNIFDKLNIMIDVASALEYLHFS-----HSTPVIHCDLKPKNVF----------DFGIGR 802 (827)
Q Consensus 747 ~l--~~l~~~-------~~~l~~~~~~~i~~~ia~~L~~Lh~~-----h~~~iiHrDlK~~NIl----------DFGla~ 802 (827)
++ ++.... ...+.+.....++.+++.||+|||.. |.++|+||||||+||+ |||+|+
T Consensus 111 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 111 YLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp EEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred EEEEeccCCCcHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 33 322211 13467778889999999999999853 3559999999999998 999997
Q ss_pred cccCCCccc---cccceecccccccccC
Q 047196 803 LLTGDRSMI---QTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~---~~~~~gt~~Y~APE~l 827 (827)
......... .....||++|+|||++
T Consensus 191 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 218 (337)
T 3mdy_A 191 KFISDTNEVDIPPNTRVGTKRYMPPEVL 218 (337)
T ss_dssp ECC---------CCSSCSCGGGCCHHHH
T ss_pred eeccccccccCCCCCCccCcceeChhhc
Confidence 764433221 1234589999999963
No 274
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.77 E-value=1.1e-18 Score=184.15 Aligned_cols=147 Identities=25% Similarity=0.390 Sum_probs=114.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch------HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCcee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA------MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKA 747 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~------~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~ 747 (827)
++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++......+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 56888999999999999999875 689999999865321 13567999999999999999999999998876554
Q ss_pred eeeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------------eeccccc
Q 047196 748 LDCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------DFGIGRL 803 (827)
Q Consensus 748 l~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------------DFGla~~ 803 (827)
+...+.. ...+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.
T Consensus 85 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~ 161 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK 161 (283)
T ss_dssp EEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEE
T ss_pred EEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCChHHEEEecCCCCCCceEEEeccccee
Confidence 4333221 234677888899999999999996 568999999999997 8888876
Q ss_pred ccCCCccccccceeccccccccc
Q 047196 804 LTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 804 ~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
...... .....||+.|+|||+
T Consensus 162 ~~~~~~--~~~~~~~~~y~aPE~ 182 (283)
T 3bhy_A 162 IEAGNE--FKNIFGTPEFVAPEI 182 (283)
T ss_dssp CC----------CCCGGGCCHHH
T ss_pred ccCCCc--ccccCCCcCccCcce
Confidence 543322 123458999999996
No 275
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.77 E-value=1.4e-18 Score=187.89 Aligned_cols=144 Identities=22% Similarity=0.385 Sum_probs=114.0
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC-CCCceEEEeeeecC--Cceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR-HRNHVKRISSCSNE--DFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~-H~niv~~~~~~~~~--~~~~l~~ 750 (827)
++|+..+.||+|+||.||+|+. .+++.||||++.... .+.+.+|++++++++ ||||+++++++... ...++..
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~ 112 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVF 112 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEE
Confidence 5788899999999999999986 578999999986443 356889999999998 99999999999873 3333322
Q ss_pred eccCC-------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecccccccCCCcccc
Q 047196 751 LHSTN-------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSMIQ 812 (827)
Q Consensus 751 l~~~~-------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~~~~~~~~~~~ 812 (827)
.+... ..+...+...++.++++||+||| +.+|+||||||+||+ |||+|+....... .
T Consensus 113 e~~~~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--~ 187 (330)
T 3nsz_A 113 EHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCH---SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--Y 187 (330)
T ss_dssp ECCCCCCHHHHGGGCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC--C
T ss_pred eccCchhHHHHHHhCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc--c
Confidence 22221 23667778899999999999996 568999999999998 9999987654332 2
Q ss_pred ccceeccccccccc
Q 047196 813 TETLVTIGYMAPGL 826 (827)
Q Consensus 813 ~~~~gt~~Y~APE~ 826 (827)
....||+.|+|||+
T Consensus 188 ~~~~~~~~y~aPE~ 201 (330)
T 3nsz_A 188 NVRVASRYFKGPEL 201 (330)
T ss_dssp CSCCSCGGGCCHHH
T ss_pred ccccccccccChhh
Confidence 23458999999996
No 276
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.77 E-value=7.6e-19 Score=190.21 Aligned_cols=148 Identities=30% Similarity=0.444 Sum_probs=113.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l 751 (827)
++|+..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++|||||++++++......++...
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 57888999999999999999875 58999999985432 3345678899999999999999999999988775444222
Q ss_pred cc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 752 HS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 752 ~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
+. ....+++.....++.++++|++||| +.+|+||||||+||+ |||+++........
T Consensus 105 ~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 180 (331)
T 4aaa_A 105 FVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCH---SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEV- 180 (331)
T ss_dssp CCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred cCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---HCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccc-
Confidence 21 1345778888999999999999996 568999999999998 99999876543322
Q ss_pred cccceeccccccccc
Q 047196 812 QTETLVTIGYMAPGL 826 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~ 826 (827)
.....||++|+|||+
T Consensus 181 ~~~~~~t~~y~aPE~ 195 (331)
T 4aaa_A 181 YDDEVATRWYRAPEL 195 (331)
T ss_dssp ---CCCCCTTCCHHH
T ss_pred cCCCcCCccccCccc
Confidence 223458999999996
No 277
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.77 E-value=1.9e-19 Score=194.47 Aligned_cols=149 Identities=27% Similarity=0.451 Sum_probs=106.7
Q ss_pred hcccccceEecCCceEEEEEEec-CCcE----EEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIE----VAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~----vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
++|+..+.||+|+||.||+|+.. +++. ||+|.+... .....+++.+|++++++++|||||++++++......++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~v 94 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLI 94 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSSEEEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCCceEE
Confidence 56888999999999999999864 4543 577777543 23345789999999999999999999999987664332
Q ss_pred -eeec---------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 -DCLH---------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 -~~l~---------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+++. .....+.+.....++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 95 ~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~ 171 (327)
T 3lzb_A 95 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEE 171 (327)
T ss_dssp ECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEEEETTEEEECCTTC--------
T ss_pred EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHh---hCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcc
Confidence 2111 12345677888999999999999996 568999999999998 999998765433
Q ss_pred ccc-cccceeccccccccc
Q 047196 809 SMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 809 ~~~-~~~~~gt~~Y~APE~ 826 (827)
... .....+|+.|+|||+
T Consensus 172 ~~~~~~~~~~t~~y~aPE~ 190 (327)
T 3lzb_A 172 KEYHAEGGKVPIKWMALES 190 (327)
T ss_dssp --------CCCGGGSCHHH
T ss_pred ccccccCCCccccccCHHH
Confidence 221 122336889999996
No 278
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.77 E-value=2.6e-19 Score=199.54 Aligned_cols=147 Identities=26% Similarity=0.364 Sum_probs=99.2
Q ss_pred cccc-cceEecCCceEEEEEEec---CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeec--CCceee-
Q 047196 676 KFSK-ENLIGVGSFGSVYKGRLH---DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN--EDFKAL- 748 (827)
Q Consensus 676 ~~~~-~~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~--~~~~~l- 748 (827)
.|+. .++||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++|||||++++++.. ....++
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~lv 98 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL 98 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS--CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC--CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEEE
Confidence 3554 458999999999999865 57889999986542 23467899999999999999999999854 333332
Q ss_pred -eeeccC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------------e
Q 047196 749 -DCLHST----------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------------D 797 (827)
Q Consensus 749 -~~l~~~----------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------------D 797 (827)
++.... ...+.+.....|+.+++.||+||| +.+|+||||||+||| |
T Consensus 99 ~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH---~~~ivH~Dlkp~NIll~~~~~~~~~~kl~D 175 (405)
T 3rgf_A 99 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH---ANWVLHRDLKPANILVMGEGPERGRVKIAD 175 (405)
T ss_dssp EECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECCSSTTTTCEEECC
T ss_pred EeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH---hCCEeCCCcCHHHeEEecCCCCCCcEEEEE
Confidence 222110 113677778899999999999996 567999999999997 9
Q ss_pred ecccccccCCCcc--ccccceecccccccccC
Q 047196 798 FGIGRLLTGDRSM--IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 798 FGla~~~~~~~~~--~~~~~~gt~~Y~APE~l 827 (827)
||+|+........ .....+||++|+|||++
T Consensus 176 fg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 207 (405)
T 3rgf_A 176 MGFARLFNSPLKPLADLDPVVVTFWYRAPELL 207 (405)
T ss_dssp TTCCC----------------CCCTTCCHHHH
T ss_pred CCCceecCCCCcccccCCCceecCcccCchhh
Confidence 9999876533211 12334589999999963
No 279
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.77 E-value=1e-18 Score=191.42 Aligned_cols=159 Identities=23% Similarity=0.194 Sum_probs=126.4
Q ss_pred cccEEEccCCcCccccCcccc-CCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEec
Q 047196 381 SLENIYISNCNIGGSIPQLIS-NLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGL 459 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~-~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 459 (827)
.++.|+|++|++++..+..+. ++++|+.|+|++|+|++..|..|.++++|++|+|++|++++..+..|.++++|+.|+|
T Consensus 40 ~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 119 (361)
T 2xot_A 40 YTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLL 119 (361)
T ss_dssp TCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEEC
Confidence 577788888888877777776 7888888888888888777777888888888888888888766777888888888888
Q ss_pred CCCcccccCCccccCCCCCCccccCCCcccccCCccc---cccccccccCCCCCCCCCCCccccccccc--CceEEcccc
Q 047196 460 AGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTF---WNLKDILFFDLSSNSLDGPLSLDIGNLRV--VIGINLSRN 534 (827)
Q Consensus 460 s~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~---~~l~~L~~LdLs~N~l~g~~p~~~~~l~~--L~~L~Ls~N 534 (827)
++|++++..|..|..+++|+.|+|++|.+++..+..| ..+++|+.|||++|+|++..+..+..++. ++.|+|++|
T Consensus 120 ~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N 199 (361)
T 2xot_A 120 YNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNN 199 (361)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSS
T ss_pred CCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCC
Confidence 8888887778888888888888888888887555555 56788888888888888766667777766 377889998
Q ss_pred eeeec
Q 047196 535 NFSGD 539 (827)
Q Consensus 535 ~l~g~ 539 (827)
.+...
T Consensus 200 ~~~C~ 204 (361)
T 2xot_A 200 PLECD 204 (361)
T ss_dssp CEECC
T ss_pred CccCC
Confidence 88753
No 280
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.77 E-value=1.1e-18 Score=186.33 Aligned_cols=150 Identities=19% Similarity=0.331 Sum_probs=115.4
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc----hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC--ce
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC----AMALKSFEAECEVMKNIRHRNHVKRISSCSNED--FK 746 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~----~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~--~~ 746 (827)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 367999999999999999999864 68999999996532 234567999999999999999999999985432 22
Q ss_pred --eeeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eeccccccc
Q 047196 747 --ALDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLT 805 (827)
Q Consensus 747 --~l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~ 805 (827)
++++... ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++...
T Consensus 84 ~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH---~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 160 (305)
T 2wtk_C 84 YMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISALGVAEALH 160 (305)
T ss_dssp EEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCEECC
T ss_pred EEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHH---HCCeeecCCCcccEEEcCCCcEEeeccccccccC
Confidence 2333221 1345778888999999999999996 568999999999998 999998764
Q ss_pred CCCcc-ccccceeccccccccc
Q 047196 806 GDRSM-IQTETLVTIGYMAPGL 826 (827)
Q Consensus 806 ~~~~~-~~~~~~gt~~Y~APE~ 826 (827)
..... ......||+.|+|||+
T Consensus 161 ~~~~~~~~~~~~~~~~y~aPE~ 182 (305)
T 2wtk_C 161 PFAADDTCRTSQGSPAFQPPEI 182 (305)
T ss_dssp TTCSSCEECCCCSCGGGCCHHH
T ss_pred ccccccccccCCCCCCCcChhh
Confidence 32221 1223458999999996
No 281
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.77 E-value=6.9e-19 Score=189.20 Aligned_cols=150 Identities=23% Similarity=0.255 Sum_probs=113.8
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecC----Cc--ee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNE----DF--KA 747 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~----~~--~~ 747 (827)
++|+..+.||+|+||.||+|+. .+|+.||||++........+.+.+|++++++++|||||++++++... .. .+
T Consensus 29 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 108 (317)
T 2buj_A 29 KHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLL 108 (317)
T ss_dssp EEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEE
T ss_pred eEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEE
Confidence 5788999999999999999986 57899999998766666677899999999999999999999998632 11 22
Q ss_pred eeeecc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eeccccccc
Q 047196 748 LDCLHS------------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLT 805 (827)
Q Consensus 748 l~~l~~------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~ 805 (827)
+++... ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++...
T Consensus 109 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~ 185 (317)
T 2buj_A 109 LPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQAC 185 (317)
T ss_dssp EECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECTTSCEEECCCSSCEESC
T ss_pred EEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEcCCCCEEEEecCcchhcc
Confidence 232221 1245778888999999999999996 458999999999998 999887643
Q ss_pred CCCccc--------cccceecccccccccC
Q 047196 806 GDRSMI--------QTETLVTIGYMAPGLL 827 (827)
Q Consensus 806 ~~~~~~--------~~~~~gt~~Y~APE~l 827 (827)
...... .....||+.|+|||++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 215 (317)
T 2buj_A 186 IHVEGSRQALTLQDWAAQRCTISYRAPELF 215 (317)
T ss_dssp EEEESHHHHHHHHHHHHHHSCGGGCCGGGS
T ss_pred cccccccccccccccccccCCcccCCHhHh
Confidence 211100 0123379999999974
No 282
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.77 E-value=6.7e-19 Score=193.81 Aligned_cols=146 Identities=25% Similarity=0.382 Sum_probs=112.7
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc-----
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF----- 745 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~----- 745 (827)
.++|...+.||+|+||.||+|+.. +|+.||||++... .....+++.+|++++++++|||||++++++...+.
T Consensus 41 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 120 (371)
T 4exu_A 41 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFY 120 (371)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCC
T ss_pred cccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccce
Confidence 357888899999999999999864 6899999999753 23345788999999999999999999999876542
Q ss_pred ---eeeeeecc-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 746 ---KALDCLHS-----TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 746 ---~~l~~l~~-----~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
..++++.. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++.....
T Consensus 121 ~~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 197 (371)
T 4exu_A 121 DFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 197 (371)
T ss_dssp CCEEEEECCCEEHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECSTTCC------
T ss_pred eEEEEEccccccHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---HCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC
Confidence 23333221 1234788888999999999999996 568999999999998 99999865432
Q ss_pred Cccccccceeccccccccc
Q 047196 808 RSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~ 826 (827)
. ...+||++|+|||+
T Consensus 198 ~----~~~~~t~~y~aPE~ 212 (371)
T 4exu_A 198 M----TGYVVTRWYRAPEV 212 (371)
T ss_dssp ------CTTCCCTTSCHHH
T ss_pred c----CCcccCccccCHHH
Confidence 1 23458999999996
No 283
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.77 E-value=1.2e-18 Score=185.04 Aligned_cols=148 Identities=26% Similarity=0.397 Sum_probs=111.7
Q ss_pred cccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeeccC
Q 047196 676 KFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLHST 754 (827)
Q Consensus 676 ~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~~~ 754 (827)
+|....+||+|+||.||+|+. .+++.||||++........+.+.+|++++++++|||||++++++...+..++...+..
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 102 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVP 102 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCC
Confidence 345556899999999999986 4689999999976655556789999999999999999999999987765444222211
Q ss_pred -------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecccccccCCCcc
Q 047196 755 -------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 755 -------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~~~~~~~~~ 810 (827)
.....+.....++.++++||+||| +.+|+||||||+||+ |||+++........
T Consensus 103 ~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~ 179 (295)
T 2clq_A 103 GGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLH---DNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPC 179 (295)
T ss_dssp EEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC----
T ss_pred CCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHH---hCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCc
Confidence 123456667789999999999996 568999999999998 89998766433221
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
.....||++|+|||++
T Consensus 180 -~~~~~~~~~y~aPE~~ 195 (295)
T 2clq_A 180 -TETFTGTLQYMAPEII 195 (295)
T ss_dssp --CCCCCCGGGCCHHHH
T ss_pred -ccccCCCccccChhhh
Confidence 1234589999999963
No 284
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.77 E-value=5.9e-19 Score=189.53 Aligned_cols=156 Identities=21% Similarity=0.371 Sum_probs=117.7
Q ss_pred HHHHHhhcccccceEecCCceEEEEEEe------cCCcEEEEEEEcccc-hHHHHHHHHHHHHHHhc-CCCCceEEEeee
Q 047196 669 DLFRATEKFSKENLIGVGSFGSVYKGRL------HDGIEVAIKVFHQNC-AMALKSFEAECEVMKNI-RHRNHVKRISSC 740 (827)
Q Consensus 669 ~~~~~~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~ 740 (827)
+.....++|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++++ +|||||++++++
T Consensus 21 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~ 100 (316)
T 2xir_A 21 KWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGAC 100 (316)
T ss_dssp HHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE
T ss_pred ceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEE
Confidence 3333457899999999999999999974 246889999997643 33456799999999999 689999999998
Q ss_pred ecCCc-e--eeeeecc---------CC---------------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCc
Q 047196 741 SNEDF-K--ALDCLHS---------TN---------------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPK 793 (827)
Q Consensus 741 ~~~~~-~--~l~~l~~---------~~---------------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~ 793 (827)
...+. . ++++... .. ..+++.....++.++++||+||| +.+|+||||||+
T Consensus 101 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH---~~~i~H~dikp~ 177 (316)
T 2xir_A 101 TKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLA---SRKCIHRDLAAR 177 (316)
T ss_dssp CCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGG
T ss_pred ecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHH---hCCcccccCccc
Confidence 76542 2 2232221 01 11567788899999999999996 568999999999
Q ss_pred cee----------eecccccccCCCccc-cccceecccccccccC
Q 047196 794 NVF----------DFGIGRLLTGDRSMI-QTETLVTIGYMAPGLL 827 (827)
Q Consensus 794 NIl----------DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~l 827 (827)
||+ |||+++......... .....||++|+|||++
T Consensus 178 Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 222 (316)
T 2xir_A 178 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETI 222 (316)
T ss_dssp GEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHH
T ss_pred eEEECCCCCEEECCCccccccccCccceeccCCCcceeecCchhh
Confidence 998 999998765443322 2234589999999963
No 285
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.77 E-value=1.5e-18 Score=189.66 Aligned_cols=150 Identities=24% Similarity=0.336 Sum_probs=114.0
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-----ce
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED-----FK 746 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-----~~ 746 (827)
.++|...+.||+|+||.||+|+.. +|+.||||++... ......++.+|++++++++|||||++++++.... ..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 367888999999999999999865 6899999999643 3344567889999999999999999999886542 22
Q ss_pred e--eeeecc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 747 A--LDCLHS------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 747 ~--l~~l~~------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+ +++... ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 90 ~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH---~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~ 166 (353)
T 2b9h_A 90 YIIQELMQTDLHRVISTQMLSDDHIQYFIYQTLRAVKVLH---GSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESA 166 (353)
T ss_dssp EEEECCCSEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECTTCCEEECCCTTCEECC---
T ss_pred EEEEeccCccHHHHHhhcCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEcCCCcEEEEeccccccccccc
Confidence 2 222211 1234677888899999999999996 568999999999998 999998764322
Q ss_pred cc---------ccccceeccccccccc
Q 047196 809 SM---------IQTETLVTIGYMAPGL 826 (827)
Q Consensus 809 ~~---------~~~~~~gt~~Y~APE~ 826 (827)
.. .....+||+.|+|||+
T Consensus 167 ~~~~~~~~~~~~~~~~~gt~~y~aPE~ 193 (353)
T 2b9h_A 167 ADNSEPTGQQSGMVEFVATRWYRAPEV 193 (353)
T ss_dssp -------------CCCCCCGGGCCHHH
T ss_pred ccccCccccccchhhccccccccCCee
Confidence 11 0122358999999996
No 286
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.76 E-value=1.9e-18 Score=187.29 Aligned_cols=152 Identities=23% Similarity=0.306 Sum_probs=104.7
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcC-CCCceEEEeeeecC-------C-
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIR-HRNHVKRISSCSNE-------D- 744 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~-H~niv~~~~~~~~~-------~- 744 (827)
.+|...++||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++ |||||++++++... .
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~ 107 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSE
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCc
Confidence 47888999999999999999864 68999999987666666778999999999996 99999999998421 1
Q ss_pred --ceeeeeecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccc
Q 047196 745 --FKALDCLHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802 (827)
Q Consensus 745 --~~~l~~l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~ 802 (827)
+.++++... ....+++.+...++.++++||+|||. +.++|+||||||+||+ |||+++
T Consensus 108 ~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~-~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 108 EFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHT-SSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred eEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHh-CCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 112222211 12457888899999999999999973 2234999999999998 999998
Q ss_pred cccCCCccc-----------cccceecccccccccC
Q 047196 803 LLTGDRSMI-----------QTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~-----------~~~~~gt~~Y~APE~l 827 (827)
......... .....||+.|+|||++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~ 222 (337)
T 3ll6_A 187 TISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEII 222 (337)
T ss_dssp CCSSCC------------------------------
T ss_pred eccccCcccccccccccchhhccccCCCCcCChhhh
Confidence 765432210 1123489999999974
No 287
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.76 E-value=1e-18 Score=187.96 Aligned_cols=149 Identities=27% Similarity=0.364 Sum_probs=109.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecC----------
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNE---------- 743 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~---------- 743 (827)
++|...+.||+|+||.||+|+.. +|+.||||++........+++.+|++++++++|||+|++++++...
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 90 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGS 90 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEecccccccccccccc
Confidence 56888899999999999999875 5899999999776666678899999999999999999999987432
Q ss_pred ----Ccee--eeeecc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecc
Q 047196 744 ----DFKA--LDCLHS------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGI 800 (827)
Q Consensus 744 ----~~~~--l~~l~~------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGl 800 (827)
...+ +++... ....+.+.....++.++++||+||| +.+|+||||||+||+ |||+
T Consensus 91 ~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~ 167 (320)
T 2i6l_A 91 LTELNSVYIVQEYMETDLANVLEQGPLLEEHARLFMYQLLRGLKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGL 167 (320)
T ss_dssp CCSCSEEEEEEECCSEEHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCBCCCCSGGGEEEETTTTEEEECCCTT
T ss_pred ccccCceeEEeeccCCCHHHHhhcCCccHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEEcCCCCeEEEccCcc
Confidence 2222 222221 1234677788899999999999996 568999999999998 9999
Q ss_pred cccccCCCcc--ccccceeccccccccc
Q 047196 801 GRLLTGDRSM--IQTETLVTIGYMAPGL 826 (827)
Q Consensus 801 a~~~~~~~~~--~~~~~~gt~~Y~APE~ 826 (827)
++........ ......+|..|+|||+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 195 (320)
T 2i6l_A 168 ARIMDPHYSHKGHLSEGLVTKWYRSPRL 195 (320)
T ss_dssp CBCC--------CCCGGGSCCTTCCHHH
T ss_pred ccccCCCcccccccccccccccccCcHH
Confidence 9876432211 1122347999999996
No 288
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.76 E-value=2.1e-19 Score=191.79 Aligned_cols=149 Identities=28% Similarity=0.463 Sum_probs=103.7
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHh--cCCCCceEEEeeeecCC----ceee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKN--IRHRNHVKRISSCSNED----FKAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~--l~H~niv~~~~~~~~~~----~~~l 748 (827)
++|...+.||+|+||.||+|+.. |+.||||++.... .+.+.+|.+++.. ++||||+++++++.... ..++
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~l 78 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWL 78 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEE
Confidence 57888999999999999999875 8899999986432 3457778888887 79999999999987765 2222
Q ss_pred --eeeccC-------CCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCCeEEccCCCccee----------eecccccc
Q 047196 749 --DCLHST-------NCSLNIFDKLNIMIDVASALEYLHF-----SHSTPVIHCDLKPKNVF----------DFGIGRLL 804 (827)
Q Consensus 749 --~~l~~~-------~~~l~~~~~~~i~~~ia~~L~~Lh~-----~h~~~iiHrDlK~~NIl----------DFGla~~~ 804 (827)
++.... ...+.+.....++.++++|++|||. .|+++|+||||||+||+ |||+|+..
T Consensus 79 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~~~ 158 (303)
T 3gxj_A 79 VSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRH 158 (303)
T ss_dssp EEECCTTCCHHHHHHHCCBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-CCE
T ss_pred EEeccCCCCHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcceec
Confidence 332221 1234556678899999999999962 23889999999999998 99999876
Q ss_pred cCCCccc---cccceecccccccccC
Q 047196 805 TGDRSMI---QTETLVTIGYMAPGLL 827 (827)
Q Consensus 805 ~~~~~~~---~~~~~gt~~Y~APE~l 827 (827)
....... .....||++|+|||++
T Consensus 159 ~~~~~~~~~~~~~~~gt~~y~aPE~~ 184 (303)
T 3gxj_A 159 DSATDTIDIAPNHRVGTKRYMAPEVL 184 (303)
T ss_dssp ETTTTEESCC-----CCGGGCCHHHH
T ss_pred cCCCcccccccCCCCcCccccCHhhh
Confidence 5443321 1223589999999963
No 289
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.76 E-value=4.1e-19 Score=194.93 Aligned_cols=147 Identities=24% Similarity=0.416 Sum_probs=101.6
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecC------C
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNE------D 744 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~------~ 744 (827)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+++.+|++++++++|||||++++++... .
T Consensus 28 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~ 107 (367)
T 2fst_X 28 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFN 107 (367)
T ss_dssp ETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCC
T ss_pred CCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCC
Confidence 36788899999999999999985 46899999998643 234557789999999999999999999988643 1
Q ss_pred --ceeeeeecc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 745 --FKALDCLHS------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 745 --~~~l~~l~~------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
+.++++... ....+++.....++.++++||+||| +.+|+||||||+||+ |||+|+....
T Consensus 108 ~~~lv~e~~~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~ 184 (367)
T 2fst_X 108 DVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTAD 184 (367)
T ss_dssp CCEEEEECCCEECC-----CCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECC---------
T ss_pred eEEEEecccCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCHhhEEECCCCCEEEeeccccccccc
Confidence 112222111 1235778888999999999999996 568999999999998 9999987543
Q ss_pred CCccccccceecccccccccC
Q 047196 807 DRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~l 827 (827)
. .+..+||++|+|||++
T Consensus 185 ~----~~~~~~t~~y~aPE~~ 201 (367)
T 2fst_X 185 E----MTGYVATRWYRAPEIM 201 (367)
T ss_dssp ----------CCCTTCCHHHH
T ss_pred c----CCCcCcCcCccChHHH
Confidence 2 1334689999999963
No 290
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.76 E-value=8.7e-19 Score=189.89 Aligned_cols=150 Identities=24% Similarity=0.437 Sum_probs=108.6
Q ss_pred hcccccceEecCCceEEEEEEecC-----CcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHD-----GIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~-----g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l 748 (827)
.+|...+.||+|+||.||+|+... +..||||++.... ......+.+|++++++++|||||++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 356667899999999999998642 3469999997543 3445679999999999999999999999987665444
Q ss_pred eeecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 749 DCLHS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 749 ~~l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
...+. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.....
T Consensus 124 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~ 200 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLA---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 200 (333)
T ss_dssp EEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCCCC-------
T ss_pred EEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCCChheEEECCCCcEEECCCCcchhhccc
Confidence 22221 2245788889999999999999996 568999999999998 99999876543
Q ss_pred Cccc--cccceecccccccccC
Q 047196 808 RSMI--QTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~--~~~~~gt~~Y~APE~l 827 (827)
.... .....+|+.|+|||++
T Consensus 201 ~~~~~~~~~~~~~~~y~aPE~~ 222 (333)
T 1mqb_A 201 PEATYTTSGGKIPIRWTAPEAI 222 (333)
T ss_dssp ----------CCCGGGSCHHHH
T ss_pred cccccccCCCCccccccCchhc
Confidence 2211 1122368899999963
No 291
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.76 E-value=6.8e-19 Score=208.01 Aligned_cols=150 Identities=21% Similarity=0.189 Sum_probs=117.5
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKAL 748 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l 748 (827)
.++|+..++||+|+||.||+|+.. +++.||||++.... ....+.+.+|.+++..+ +|++|+++.+++...+..++
T Consensus 340 ~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~l 419 (674)
T 3pfq_A 340 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF 419 (674)
T ss_dssp CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEE
T ss_pred ccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEE
Confidence 467899999999999999999865 68899999997532 22345788899999987 69999999999887765544
Q ss_pred eeeccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 DCLHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 ~~l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
...+... ..+++.....++.+++.||+||| +.+|+||||||+||| |||+|+......
T Consensus 420 V~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH---~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~ 496 (674)
T 3pfq_A 420 VMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG 496 (674)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT
T ss_pred EEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC
Confidence 3333221 35677788899999999999996 568999999999998 999998654333
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
.. ....+||++|||||++
T Consensus 497 ~~-~~~~~GT~~Y~APE~l 514 (674)
T 3pfq_A 497 VT-TKTFCGTPDYIAPEII 514 (674)
T ss_dssp CC-BCCCCSCSSSCCHHHH
T ss_pred cc-cccccCCCcccCHhhh
Confidence 22 2335699999999974
No 292
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.76 E-value=1.9e-18 Score=200.91 Aligned_cols=171 Identities=25% Similarity=0.369 Sum_probs=79.5
Q ss_pred CCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCc
Q 047196 314 SLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIG 393 (827)
Q Consensus 314 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~ 393 (827)
.+++|+.|++++|.+... | .+..+++|+.|+|++|.+++..| +..+. +|+.|+|++|+++
T Consensus 41 ~L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~-----------------l~~l~-~L~~L~Ls~N~l~ 100 (605)
T 1m9s_A 41 ELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP-----------------LTNLK-NLGWLFLDENKIK 100 (605)
T ss_dssp HHTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG-----------------GGGCT-TCCEEECCSSCCC
T ss_pred cCCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh-----------------hccCC-CCCEEECcCCCCC
Confidence 345556666666655432 2 34555555555555555443211 12222 4555555555554
Q ss_pred cccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCcccc
Q 047196 394 GSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLG 473 (827)
Q Consensus 394 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 473 (827)
+ +| .+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++. ..+..+++|+.|+|++|++++..| +.
T Consensus 101 ~-l~-~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~ 172 (605)
T 1m9s_A 101 D-LS-SLKDLKKLKSLSLEHNGISDI--NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LA 172 (605)
T ss_dssp C-CT-TSTTCTTCCEEECTTSCCCCC--GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GT
T ss_pred C-Ch-hhccCCCCCEEEecCCCCCCC--ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hc
Confidence 3 12 344445555555555555432 2344445555555555555432 334444445555555555444333 44
Q ss_pred CCCCCCccccCCCcccccCCccccccccccccCCCCCCCCC
Q 047196 474 NLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDG 514 (827)
Q Consensus 474 ~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g 514 (827)
.+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++
T Consensus 173 ~l~~L~~L~Ls~N~i~~l--~~l~~l~~L~~L~L~~N~l~~ 211 (605)
T 1m9s_A 173 GLTKLQNLYLSKNHISDL--RALAGLKNLDVLELFSQECLN 211 (605)
T ss_dssp TCTTCCEEECCSSCCCBC--GGGTTCTTCSEEECCSEEEEC
T ss_pred cCCCCCEEECcCCCCCCC--hHHccCCCCCEEEccCCcCcC
Confidence 444445555554444442 124444444444444444443
No 293
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.76 E-value=2.6e-18 Score=184.90 Aligned_cols=148 Identities=21% Similarity=0.391 Sum_probs=113.9
Q ss_pred ccccceEecCCceEEEEEEec-----CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC--ce--
Q 047196 677 FSKENLIGVGSFGSVYKGRLH-----DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNED--FK-- 746 (827)
Q Consensus 677 ~~~~~~iG~G~fg~Vy~~~~~-----~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~--~~-- 746 (827)
|+..+.||+|+||.||+|++. +|+.||||++.... ....+.+.+|++++++++|||||++++++...+ ..
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 478899999999999998653 57899999997543 345678999999999999999999999998743 22
Q ss_pred eeeeecc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 747 ALDCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 747 ~l~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
++++... ....+++.....++.+++.||+||| +.+|+||||||+||+ |||+++.......
T Consensus 113 v~e~~~~~~L~~~l~~~~~~~~~~~~i~~~l~~~l~~LH---~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 189 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEGMAYLH---AQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE 189 (318)
T ss_dssp EECCCTTCBHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS
T ss_pred EEecccCCcHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEEcCCCCEEECCcccccccccccc
Confidence 2233221 1234678888999999999999996 568999999999998 9999987754432
Q ss_pred c--ccccceecccccccccC
Q 047196 810 M--IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~--~~~~~~gt~~Y~APE~l 827 (827)
. ......||+.|+|||++
T Consensus 190 ~~~~~~~~~~~~~y~aPE~~ 209 (318)
T 3lxp_A 190 YYRVREDGDSPVFWYAPECL 209 (318)
T ss_dssp EEEC---CCCCGGGCCHHHH
T ss_pred ccccccCCCCCceeeChHHh
Confidence 1 12223478899999963
No 294
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.76 E-value=8.6e-19 Score=188.11 Aligned_cols=151 Identities=23% Similarity=0.411 Sum_probs=106.4
Q ss_pred HhhcccccceEecCCceEEEEEEec----CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc-
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH----DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF- 745 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~- 745 (827)
..++|...+.||+|+||.||+|+.. +++.||||++... .....+.+.+|++++++++||||+++++++.....
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 111 (313)
T 3brb_A 32 DRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQ 111 (313)
T ss_dssp CGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----
T ss_pred CHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeecccc
Confidence 4467888899999999999999754 3458999998643 34455789999999999999999999999876542
Q ss_pred ------eeeeeecc--------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------
Q 047196 746 ------KALDCLHS--------------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------- 796 (827)
Q Consensus 746 ------~~l~~l~~--------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------- 796 (827)
.++++... ....+++.....++.++++||.||| +.+|+||||||+||+
T Consensus 112 ~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dikp~NIli~~~~~~kl 188 (313)
T 3brb_A 112 GIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCV 188 (313)
T ss_dssp ---CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHH---TTTCCCCCCSGGGEEECTTSCEEE
T ss_pred CCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEE
Confidence 22332221 1234778889999999999999995 678999999999998
Q ss_pred -eecccccccCCCccc-cccceeccccccccc
Q 047196 797 -DFGIGRLLTGDRSMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 797 -DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~ 826 (827)
|||+++......... .....+++.|+|||+
T Consensus 189 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 220 (313)
T 3brb_A 189 ADFGLSKKIYSGDYYRQGRIAKMPVKWIAIES 220 (313)
T ss_dssp CSCSCC----------------CCGGGSCHHH
T ss_pred eecCcceecccccccCcccccCCCccccCchh
Confidence 999998764432211 122337889999996
No 295
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.76 E-value=1.4e-18 Score=190.38 Aligned_cols=156 Identities=23% Similarity=0.293 Sum_probs=109.0
Q ss_pred hHHHHHhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc-
Q 047196 668 QDLFRATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF- 745 (827)
Q Consensus 668 ~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~- 745 (827)
.......++|...+.||+|+||.||+|+.. +|+.||||++.... ....++.+|++.++.++|||||++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~ 94 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP-RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGER 94 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT-TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECSS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc-cccHHHHHHHHHHHhcCCCCcccHHHhhhccccc
Confidence 344566788999999999999999999874 68999999985542 223456788899999999999999999855221
Q ss_pred ------e--eeeeecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------
Q 047196 746 ------K--ALDCLHS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------- 796 (827)
Q Consensus 746 ------~--~l~~l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------- 796 (827)
. +++++.. ....+.+.....++.+++.|+.||| .|+++|+||||||+||+
T Consensus 95 ~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH-~~~~~ivH~Dlkp~NIll~~~~~~~kl 173 (360)
T 3e3p_A 95 DRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLH-LPSVNVCHRDIKPHNVLVNEADGTLKL 173 (360)
T ss_dssp CTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHT-STTTCCBCSCCCGGGEEEETTTTEEEE
T ss_pred cccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh-CCCCCeecCcCCHHHEEEeCCCCcEEE
Confidence 2 2233221 1234566777889999999999997 35899999999999998
Q ss_pred -eecccccccCCCccccccceecccccccccC
Q 047196 797 -DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 -DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++........ ....||++|+|||++
T Consensus 174 ~Dfg~a~~~~~~~~~--~~~~gt~~y~aPE~~ 203 (360)
T 3e3p_A 174 CDFGSAKKLSPSEPN--VAYICSRYYRAPELI 203 (360)
T ss_dssp CCCTTCBCCCTTSCC--CSTTSCGGGCCHHHH
T ss_pred eeCCCceecCCCCCc--ccccCCcceeCHHHH
Confidence 99999876543322 234589999999963
No 296
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.76 E-value=1.2e-18 Score=183.88 Aligned_cols=144 Identities=30% Similarity=0.488 Sum_probs=112.8
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC--------
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED-------- 744 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-------- 744 (827)
..+|+..+.||+|+||.||+|+.. +|+.||||++.... +.+.+|++++++++|||++++++++...+
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 85 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSK 85 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC------
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccc
Confidence 457889999999999999999875 78999999987543 34678999999999999999999875411
Q ss_pred ----------ceeeeeecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------
Q 047196 745 ----------FKALDCLHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------- 796 (827)
Q Consensus 745 ----------~~~l~~l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------- 796 (827)
+..+++... ....+++.....++.++++||.||| +.+|+||||||+||+
T Consensus 86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~k 162 (284)
T 2a19_B 86 NSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVK 162 (284)
T ss_dssp ---CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEE
T ss_pred cccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCeeeccCCHHHEEEcCCCCEE
Confidence 112222221 1235678888899999999999996 568999999999998
Q ss_pred --eecccccccCCCccccccceeccccccccc
Q 047196 797 --DFGIGRLLTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 797 --DFGla~~~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
|||+++....... .....||++|+|||+
T Consensus 163 l~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~ 192 (284)
T 2a19_B 163 IGDFGLVTSLKNDGK--RTRSKGTLRYMSPEQ 192 (284)
T ss_dssp ECCCTTCEESSCCSC--CCCCCSCCTTSCHHH
T ss_pred ECcchhheecccccc--ccccCCcccccChhh
Confidence 9999987654432 123458999999996
No 297
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.76 E-value=2.9e-18 Score=181.20 Aligned_cols=146 Identities=25% Similarity=0.395 Sum_probs=115.6
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|...+.||+|+||.||+|+.. +++.||||++..... ...+.+.+|++++++++|||++++++++...+..++..
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57888999999999999999875 588999999864321 12467899999999999999999999998776554433
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+.. ...+++.....++.++++|++||| +.+|+||||||+||+ |||++.......
T Consensus 94 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~-- 168 (284)
T 2vgo_A 94 EFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR-- 168 (284)
T ss_dssp CCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC--
T ss_pred EeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCceecCCCHHHEEEcCCCCEEEecccccccCcccc--
Confidence 2221 134677788899999999999995 678999999999998 999987654322
Q ss_pred ccccceeccccccccc
Q 047196 811 IQTETLVTIGYMAPGL 826 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~ 826 (827)
.....||+.|+|||+
T Consensus 169 -~~~~~~~~~y~aPE~ 183 (284)
T 2vgo_A 169 -RRTMCGTLDYLPPEM 183 (284)
T ss_dssp -BCCCCSCGGGCCHHH
T ss_pred -cccccCCCCcCCHHH
Confidence 123458999999996
No 298
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.76 E-value=2.8e-18 Score=183.25 Aligned_cols=149 Identities=28% Similarity=0.344 Sum_probs=118.6
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
+.|...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|++++++++|||++++++++......++...+
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 5688889999999999999986 468999999986543 33457899999999999999999999999877654443222
Q ss_pred c---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccccc
Q 047196 753 S---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQT 813 (827)
Q Consensus 753 ~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~~ 813 (827)
. ....+++.....++.++++|+.||| +.+|+||||||+||+ |||+++........ ..
T Consensus 102 ~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-~~ 177 (303)
T 3a7i_A 102 LGGGSALDLLEPGPLDETQIATILREILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIK-RN 177 (303)
T ss_dssp CTTEEHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCC-BC
T ss_pred CCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChheEEECCCCCEEEeecccceecCccccc-cC
Confidence 2 1245778888999999999999996 568999999999998 99999876543321 22
Q ss_pred cceecccccccccC
Q 047196 814 ETLVTIGYMAPGLL 827 (827)
Q Consensus 814 ~~~gt~~Y~APE~l 827 (827)
...||+.|+|||++
T Consensus 178 ~~~~~~~y~aPE~~ 191 (303)
T 3a7i_A 178 TFVGTPFWMAPEVI 191 (303)
T ss_dssp CCCSCGGGCCHHHH
T ss_pred ccCCCcCccCHHHH
Confidence 34589999999963
No 299
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.76 E-value=1.9e-18 Score=181.79 Aligned_cols=148 Identities=24% Similarity=0.391 Sum_probs=110.0
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch---HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA---MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~---~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|...+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++..
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 56888899999999999999875 789999999865322 23467899999999999999999999998876555433
Q ss_pred eccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+... ..+++.....++.++++|++||| +.+|+||||||+||+ |||+++.......
T Consensus 91 e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 166 (276)
T 2h6d_A 91 EYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH---RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF- 166 (276)
T ss_dssp ECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC----
T ss_pred eccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc-
Confidence 33221 24567778899999999999996 457999999999998 9999887643322
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
.....||+.|+|||++
T Consensus 167 -~~~~~~~~~y~aPE~~ 182 (276)
T 2h6d_A 167 -LRTSCGSPNYAAPEVI 182 (276)
T ss_dssp -----------CCTGGG
T ss_pred -eecccCCccccCHHHH
Confidence 1234589999999974
No 300
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.76 E-value=9.5e-19 Score=189.08 Aligned_cols=150 Identities=23% Similarity=0.407 Sum_probs=112.1
Q ss_pred hhcccccceEecCCceEEEEEEe------cCCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL------HDGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK 746 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~------~~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~ 746 (827)
.++|...+.||+|+||.||+|+. .+++.||||++... ......++.+|+.++++++|||||++++++......
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 35788899999999999999984 24788999999644 344556899999999999999999999999876544
Q ss_pred ee--eeecc---------C------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------
Q 047196 747 AL--DCLHS---------T------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------- 796 (827)
Q Consensus 747 ~l--~~l~~---------~------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------- 796 (827)
++ ++... . ...+.+.+...++.++++||+||| +.+|+||||||+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHh---hCCeecCcCCHhHEEEecCCCcceEEEC
Confidence 33 33211 0 124778888999999999999996 568999999999998
Q ss_pred eecccccccCCCccc-cccceeccccccccc
Q 047196 797 DFGIGRLLTGDRSMI-QTETLVTIGYMAPGL 826 (827)
Q Consensus 797 DFGla~~~~~~~~~~-~~~~~gt~~Y~APE~ 826 (827)
|||+++......... .....||++|+|||+
T Consensus 186 Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 216 (327)
T 2yfx_A 186 DFGMARDIYRASYYRKGGCAMLPVKWMPPEA 216 (327)
T ss_dssp CCHHHHHHHC------CCGGGSCGGGCCHHH
T ss_pred ccccccccccccccccCCCcCCCcceeCHhH
Confidence 899887654332211 122347899999996
No 301
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.76 E-value=1.1e-18 Score=184.84 Aligned_cols=149 Identities=24% Similarity=0.261 Sum_probs=105.0
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc-h-HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceee--
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC-A-MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKAL-- 748 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~-~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l-- 748 (827)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... . ...+.+.+|...++.++||||+++++++..++..++
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 36788999999999999999986 578999999996542 2 223345555666888999999999999987765444
Q ss_pred eeecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 749 DCLHS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 749 ~~l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
++... ....+++.....++.++++|++|||.. .+|+||||||+||+ |||+++.....
T Consensus 86 e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 163 (290)
T 3fme_A 86 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDD 163 (290)
T ss_dssp ECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH--SCCCCCCCSGGGCEECTTCCEEBCCC---------
T ss_pred ehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecCCccccccc
Confidence 22211 124577888899999999999999742 37999999999998 99999876543
Q ss_pred Cccccccceeccccccccc
Q 047196 808 RSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~ 826 (827)
.. .....||+.|+|||+
T Consensus 164 ~~--~~~~~~t~~y~aPE~ 180 (290)
T 3fme_A 164 VA--KDIDAGCKPYMAPER 180 (290)
T ss_dssp --------CCCCCCSCHHH
T ss_pred cc--ccccCCCccccChhh
Confidence 22 122358999999997
No 302
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.76 E-value=1.2e-18 Score=207.28 Aligned_cols=145 Identities=22% Similarity=0.333 Sum_probs=116.9
Q ss_pred hcccccceEecCCceEEEEEEec--CCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc------
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH--DGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF------ 745 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~--~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~------ 745 (827)
++|...+.||+|+||.||+|+.. +|+.||||++... .....+.|.+|++++++++|||||++++++...+.
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57889999999999999999875 6899999998643 34455678999999999999999999999876543
Q ss_pred -eeeeeeccC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------eecccccccCCCc
Q 047196 746 -KALDCLHST------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------DFGIGRLLTGDRS 809 (827)
Q Consensus 746 -~~l~~l~~~------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------DFGla~~~~~~~~ 809 (827)
.+++++... ...+++.+...|+.++++||+||| +.+|+||||||+||+ |||+++.....
T Consensus 160 ~lv~E~~~g~~L~~~~~~~l~~~~~~~~~~qi~~aL~~lH---~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~-- 234 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQKLPVAEAIAYLLEILPALSYLH---SIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSF-- 234 (681)
T ss_dssp EEEEECCCCEECC----CCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECSSCEEECCCTTCEETTCC--
T ss_pred EEEEEeCCCCcHHHHHhCCCCHHHHHHHHHHHHHHHHHHH---HCCCeecccChHHeEEeCCcEEEEecccchhcccC--
Confidence 333433221 225778889999999999999996 568999999999998 99999876433
Q ss_pred cccccceecccccccccC
Q 047196 810 MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~~~~~gt~~Y~APE~l 827 (827)
....||++|||||++
T Consensus 235 ---~~~~gt~~y~aPE~~ 249 (681)
T 2pzi_A 235 ---GYLYGTPGFQAPEIV 249 (681)
T ss_dssp ---SCCCCCTTTSCTTHH
T ss_pred ---CccCCCccccCHHHH
Confidence 234599999999963
No 303
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.76 E-value=2.2e-19 Score=214.10 Aligned_cols=182 Identities=23% Similarity=0.244 Sum_probs=76.1
Q ss_pred cCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCC
Q 047196 396 IPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNL 475 (827)
Q Consensus 396 ~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 475 (827)
.|..+..+++|+.|+|++|++. .+|..+.++++|++|+|++|.|+ .+|..+.++++|++|+|++|+|+ .+|..++++
T Consensus 216 ~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l 292 (727)
T 4b8c_D 216 PKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSC 292 (727)
T ss_dssp ------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGG
T ss_pred ChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCC
Confidence 3444555555555555555554 34444445555555555555555 45555555555555555555555 445555555
Q ss_pred CCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccC-ceEEcccceeeecccccccCCCCCCEEE
Q 047196 476 TSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVV-IGINLSRNNFSGDIPSTIGDLKDLQNIS 554 (827)
Q Consensus 476 ~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L-~~L~Ls~N~l~g~ip~~~~~l~~L~~L~ 554 (827)
++|++|+|++|.|+ .+|..|..+++|+.|+|++|.|++.+|..+..+... ..++|++|.++|.+|.. |+.|+
T Consensus 293 ~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~------l~~l~ 365 (727)
T 4b8c_D 293 FQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHE------RRFIE 365 (727)
T ss_dssp TTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC-----------
T ss_pred CCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCccc------cceeE
Confidence 55555555555554 344445555555555555555555555544433211 22455555555555543 23344
Q ss_pred CCCC--------cceeecCCCCc---CCceEeCcCCcCeecCCC
Q 047196 555 LACN--------GLEGLIPESFG---YLTELNLSFNKLEGEIPR 587 (827)
Q Consensus 555 Ls~N--------~l~g~ip~~~~---~L~~L~ls~N~l~g~ip~ 587 (827)
+++| .+.+.++..+. .+....+++|.+.+....
T Consensus 366 l~~n~~~~~~~~~l~~~~~~~~~~l~~~~~~~ls~Nil~~~~~~ 409 (727)
T 4b8c_D 366 INTDGEPQREYDSLQQSTEHLATDLAKRTFTVLSYNTLCQHYAT 409 (727)
T ss_dssp ------------------------------------CCCGGGCC
T ss_pred eecccccccccCCccccccchhhcccccceeeeeccccccccCc
Confidence 4444 22222222222 334556677776654443
No 304
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.76 E-value=3.4e-18 Score=181.98 Aligned_cols=148 Identities=22% Similarity=0.309 Sum_probs=117.5
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---------hHHHHHHHHHHHHHHhcC-CCCceEEEeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---------AMALKSFEAECEVMKNIR-HRNHVKRISSCSN 742 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---------~~~~~~~~~Ei~~l~~l~-H~niv~~~~~~~~ 742 (827)
.++|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++ ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888999999999999999875 68999999986432 123467889999999996 9999999999987
Q ss_pred CCceeeeeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccc
Q 047196 743 EDFKALDCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGR 802 (827)
Q Consensus 743 ~~~~~l~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~ 802 (827)
....++...+.. ...+++.....++.++++||+||| +.+|+||||||+||+ |||+++
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~ 172 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSC 172 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECTTCCEEECCCTTCE
T ss_pred CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCcceEEEcCCCcEEEecccchh
Confidence 765554333322 134677788899999999999996 568999999999998 999998
Q ss_pred cccCCCccccccceeccccccccc
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
....... .....||+.|+|||+
T Consensus 173 ~~~~~~~--~~~~~~~~~y~aPE~ 194 (298)
T 1phk_A 173 QLDPGEK--LREVCGTPSYLAPEI 194 (298)
T ss_dssp ECCTTCC--BCCCCSCGGGCCHHH
T ss_pred hcCCCcc--cccccCCccccCHHH
Confidence 7654322 123458999999996
No 305
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.76 E-value=1.2e-18 Score=204.60 Aligned_cols=144 Identities=25% Similarity=0.442 Sum_probs=107.8
Q ss_pred ceEecCCceEEEEEEec---CCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce-eeeeecc-
Q 047196 681 NLIGVGSFGSVYKGRLH---DGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK-ALDCLHS- 753 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~---~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~-~l~~l~~- 753 (827)
+.||+|+||.||+|.+. .++.||||+++... ....++|.+|++++++++|||||+++++|..+... +++++..
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~lv~E~~~~g 454 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELG 454 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEESSSEEEEEECCTTE
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEEEccCCC
Confidence 57999999999999653 46889999997543 23457899999999999999999999999765532 2233221
Q ss_pred -------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc--cccc
Q 047196 754 -------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM--IQTE 814 (827)
Q Consensus 754 -------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~--~~~~ 814 (827)
....+.+.....|+.+|++||+||| +.+|+||||||+||| |||+|+.+..+... ..+.
T Consensus 455 ~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH---~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 531 (635)
T 4fl3_A 455 PLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531 (635)
T ss_dssp EHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred CHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHH---HCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence 1245778888999999999999996 568999999999998 99999887544322 1222
Q ss_pred ceecccccccccC
Q 047196 815 TLVTIGYMAPGLL 827 (827)
Q Consensus 815 ~~gt~~Y~APE~l 827 (827)
..+|+.|+|||++
T Consensus 532 ~~~t~~y~APE~~ 544 (635)
T 4fl3_A 532 GKWPVKWYAPECI 544 (635)
T ss_dssp ---CGGGSCHHHH
T ss_pred CCCceeeeChhhh
Confidence 3368899999974
No 306
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.76 E-value=1.3e-18 Score=190.72 Aligned_cols=156 Identities=26% Similarity=0.332 Sum_probs=119.6
Q ss_pred ccchhHHHHHhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC-----CCCceEEE
Q 047196 664 RFSYQDLFRATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR-----HRNHVKRI 737 (827)
Q Consensus 664 ~~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~-----H~niv~~~ 737 (827)
.+++.+-....++|...++||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++ |||||+++
T Consensus 24 ~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~ 102 (360)
T 3llt_A 24 HFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNI-KKYTRSAKIEADILKKIQNDDINNNNIVKYH 102 (360)
T ss_dssp SCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-HHHHHHHHHHHHHHHHTCCCSTTGGGBCCEE
T ss_pred eeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccc-hhhhhhhHHHHHHHHHhcccCCCCCCeeccc
Confidence 344444444567899999999999999999987 46899999998643 334567888999999997 99999999
Q ss_pred eeeecCCceeeeeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------
Q 047196 738 SSCSNEDFKALDCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------- 796 (827)
Q Consensus 738 ~~~~~~~~~~l~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------- 796 (827)
+++...+..++...+.. ...+++.+...++.++++||+||| +.+|+||||||+|||
T Consensus 103 ~~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~~~~ 179 (360)
T 3llt_A 103 GKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEKSL 179 (360)
T ss_dssp EEEEETTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCTTCCEEE
T ss_pred ceeeECCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---HCCeeeCCCCcccEEEccccccccc
Confidence 99988775544322211 123677788899999999999996 578999999999985
Q ss_pred -------------------------eecccccccCCCccccccceecccccccccC
Q 047196 797 -------------------------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 -------------------------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+|+..... .....||+.|+|||++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~----~~~~~gt~~y~aPE~~ 231 (360)
T 3llt_A 180 ITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY----HGSIINTRQYRAPEVI 231 (360)
T ss_dssp EEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC----CCSCCSCGGGCCHHHH
T ss_pred cchhcccccccccccccCCCCEEEEeccCceecCCC----CcCccCcccccCcHHH
Confidence 67777654322 1234589999999973
No 307
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.76 E-value=4.7e-19 Score=198.66 Aligned_cols=147 Identities=23% Similarity=0.424 Sum_probs=107.3
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceeeeeecc
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKALDCLHS 753 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l~~l~~ 753 (827)
.+|...++||+|+||+||.....+|+.||||++..... +.+.+|+++++++ +|||||++++++.+....++...+.
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~ 100 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELC 100 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECC
Confidence 46888899999999986655556789999999864322 2356899999999 7999999999998877654432221
Q ss_pred ----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------------eecccccccCCC
Q 047196 754 ----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------------DFGIGRLLTGDR 808 (827)
Q Consensus 754 ----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------------DFGla~~~~~~~ 808 (827)
........+...++.++++||+||| +.+|+||||||+||+ |||+|+......
T Consensus 101 ~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~ 177 (432)
T 3p23_A 101 AATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177 (432)
T ss_dssp SEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHH---HTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC----
T ss_pred CCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHH---HCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCC
Confidence 1122333456789999999999996 567999999999987 999998765432
Q ss_pred cc--ccccceecccccccccC
Q 047196 809 SM--IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~--~~~~~~gt~~Y~APE~l 827 (827)
.. .....+||++|+|||++
T Consensus 178 ~~~~~~~~~~gt~~y~APE~l 198 (432)
T 3p23_A 178 HSFSRRSGVPGTEGWIAPEML 198 (432)
T ss_dssp --------CCSCTTSCCGGGT
T ss_pred cceeeccccCCCcCccChhhh
Confidence 21 12334599999999975
No 308
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.76 E-value=1.3e-18 Score=182.41 Aligned_cols=145 Identities=16% Similarity=0.316 Sum_probs=110.4
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecC--Cc--eee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNE--DF--KAL 748 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~--~~--~~l 748 (827)
++|...+.||+|+||.||+|+.+ |+.||||++... .....++|.+|++++++++|||||++++++... .. ..+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56888899999999999999985 789999999754 234557899999999999999999999999775 33 233
Q ss_pred eeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 749 DCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 749 ~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
++.... ...+++.+...++.++++||+|||. +.++|+||||||+||+ |||++....
T Consensus 89 e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~-~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--- 164 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--- 164 (271)
T ss_dssp ECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTT-SSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS---
T ss_pred cccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhc-CCCceecCCCccceEEEcCCcceeEEeccceeeec---
Confidence 333221 1247888999999999999999953 2233999999999998 344432211
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
.....||+.|+|||++
T Consensus 165 ---~~~~~~t~~y~aPE~~ 180 (271)
T 3kmu_A 165 ---SPGRMYAPAWVAPEAL 180 (271)
T ss_dssp ---CTTCBSCGGGSCHHHH
T ss_pred ---ccCccCCccccChhhh
Confidence 1234589999999963
No 309
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.76 E-value=7.4e-19 Score=192.93 Aligned_cols=151 Identities=17% Similarity=0.224 Sum_probs=111.3
Q ss_pred hhcccccceEecCCceEEEEEEecC------CcEEEEEEEcccchHH-----------HHHHHHHHHHHHhcCCCCceEE
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHD------GIEVAIKVFHQNCAMA-----------LKSFEAECEVMKNIRHRNHVKR 736 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~------g~~vAvK~l~~~~~~~-----------~~~~~~Ei~~l~~l~H~niv~~ 736 (827)
.++|...+.||+|+||.||+|++.. ++.||||++....... ...+.+|+..++.++|+|||++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4579999999999999999998754 4789999986543211 1234456777888899999999
Q ss_pred EeeeecCC------ceeeeeec--------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------
Q 047196 737 ISSCSNED------FKALDCLH--------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------ 796 (827)
Q Consensus 737 ~~~~~~~~------~~~l~~l~--------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------ 796 (827)
++++.... +.+++++. .....+++..+..|+.++++||+||| +.+|+||||||+|||
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH---~~~iiHrDlkp~Nill~~~~~ 190 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIH---EHEYVHGDIKASNLLLNYKNP 190 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEEESSCT
T ss_pred EeeeeeccCCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeEEecCCHHHEEEecCCC
Confidence 99986641 22333331 12246889999999999999999996 458999999999998
Q ss_pred ------eecccccccCCCcc------ccccceecccccccccC
Q 047196 797 ------DFGIGRLLTGDRSM------IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ------DFGla~~~~~~~~~------~~~~~~gt~~Y~APE~l 827 (827)
|||+|+.+...... ......||+.|||||++
T Consensus 191 ~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 233 (364)
T 3op5_A 191 DQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAH 233 (364)
T ss_dssp TCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTTCCHHHH
T ss_pred CeEEEEECCcceecccCCcccccccCcccccCCCCCccCHHHh
Confidence 99999876433211 11223499999999963
No 310
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.76 E-value=8.9e-19 Score=192.02 Aligned_cols=148 Identities=23% Similarity=0.297 Sum_probs=116.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
++|+..+.||+|+||.||+|+.. +|+.||+|++... .....+.+.+|++++++++|||||++++++...+..++...+
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56888899999999999999875 6899999998754 344457899999999999999999999999887655443333
Q ss_pred cCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcccc
Q 047196 753 STN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMIQ 812 (827)
Q Consensus 753 ~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~~ 812 (827)
... ..+++.....++.++++|++|||.. .+|+||||||+||+ |||+++...... .
T Consensus 113 ~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---~ 187 (360)
T 3eqc_A 113 MDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM---A 187 (360)
T ss_dssp CTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH--HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----
T ss_pred CCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh--CCEEcCCccHHHEEECCCCCEEEEECCCCccccccc---c
Confidence 221 2456677788999999999999743 27999999999998 999987653221 1
Q ss_pred ccceecccccccccC
Q 047196 813 TETLVTIGYMAPGLL 827 (827)
Q Consensus 813 ~~~~gt~~Y~APE~l 827 (827)
....||++|+|||++
T Consensus 188 ~~~~gt~~y~aPE~~ 202 (360)
T 3eqc_A 188 NSFVGTRSYMSPERL 202 (360)
T ss_dssp ---CCCCTTCCHHHH
T ss_pred cCCCCCCCeECHHHH
Confidence 234589999999963
No 311
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.76 E-value=1.3e-18 Score=190.10 Aligned_cols=145 Identities=25% Similarity=0.402 Sum_probs=112.2
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-------
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED------- 744 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~------- 744 (827)
++|...+.||+|+||.||+|+.. +|+.||||++... .....+++.+|+.++++++|||||++++++....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 56888899999999999999864 6899999999653 2334567899999999999999999999987653
Q ss_pred -ceeeeeecc-----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 745 -FKALDCLHS-----TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 745 -~~~l~~l~~-----~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+..+++... ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++.....
T Consensus 104 ~~lv~e~~~~~l~~~~~~~~~~~~~~~i~~qi~~al~~LH---~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~- 179 (353)
T 3coi_A 104 FYLVMPFMQTDLQKIMGLKFSEEKIQYLVYQMLKGLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE- 179 (353)
T ss_dssp CEEEEECCSEEGGGTTTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-----
T ss_pred EEEEeccccCCHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC-
Confidence 223333221 1234678888999999999999996 568999999999998 99998765422
Q ss_pred ccccccceeccccccccc
Q 047196 809 SMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~ 826 (827)
.....||++|+|||+
T Consensus 180 ---~~~~~~t~~y~aPE~ 194 (353)
T 3coi_A 180 ---MTGYVVTRWYRAPEV 194 (353)
T ss_dssp -------CCSBCCSCHHH
T ss_pred ---ccccccCcCcCCHHH
Confidence 123458999999996
No 312
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.76 E-value=1.5e-18 Score=184.64 Aligned_cols=147 Identities=17% Similarity=0.198 Sum_probs=115.7
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceeeeeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
++|...+.||+|+||.||+|+. .+|+.||||++.... ..+.+.+|+++++++ +|++++++++++......++...+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~ 87 (298)
T 1csn_A 10 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS--DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDL 87 (298)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT--TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEEC
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC--ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEe
Confidence 5688899999999999999985 578999999986432 234578999999999 799999999998877654442222
Q ss_pred c----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------------eecccccccCC
Q 047196 753 S----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------------DFGIGRLLTGD 807 (827)
Q Consensus 753 ~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------------DFGla~~~~~~ 807 (827)
. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.....
T Consensus 88 ~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~ 164 (298)
T 1csn_A 88 LGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIH---EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDP 164 (298)
T ss_dssp CCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCT
T ss_pred cCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccc
Confidence 1 1234778888999999999999996 678999999999998 89999876543
Q ss_pred Ccc------ccccceeccccccccc
Q 047196 808 RSM------IQTETLVTIGYMAPGL 826 (827)
Q Consensus 808 ~~~------~~~~~~gt~~Y~APE~ 826 (827)
... ......||+.|+|||+
T Consensus 165 ~~~~~~~~~~~~~~~gt~~y~aPE~ 189 (298)
T 1csn_A 165 VTKQHIPYREKKNLSGTARYMSINT 189 (298)
T ss_dssp TTCCBCCCCCCCCCCSCTTTCCHHH
T ss_pred cccccccccCccCCCCCcccCCchh
Confidence 221 1223458999999996
No 313
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.76 E-value=4.6e-18 Score=180.28 Aligned_cols=148 Identities=28% Similarity=0.391 Sum_probs=111.9
Q ss_pred cccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecC----Cceee
Q 047196 676 KFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNE----DFKAL 748 (827)
Q Consensus 676 ~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~----~~~~l 748 (827)
.|...+.||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++|||||++++++... ...++
T Consensus 27 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~l 106 (290)
T 1t4h_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEE
T ss_pred eEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEE
Confidence 3666778999999999999864 6889999998653 244567899999999999999999999987642 22222
Q ss_pred --eeeccC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecccccccCC
Q 047196 749 --DCLHST--------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGRLLTGD 807 (827)
Q Consensus 749 --~~l~~~--------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~~~~~~ 807 (827)
++.... ...+++.....++.++++||+|||. +.++|+||||||+||+ |||+++.....
T Consensus 107 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~-~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 107 VTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHT-RTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp EEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHT-SSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred EEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHc-CCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 332211 1346777788999999999999973 2234999999999998 99998755433
Q ss_pred CccccccceecccccccccC
Q 047196 808 RSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~l 827 (827)
.. ....||++|+|||++
T Consensus 186 ~~---~~~~~t~~y~aPE~~ 202 (290)
T 1t4h_A 186 FA---KAVIGTPEFMAPEMY 202 (290)
T ss_dssp SB---EESCSSCCCCCGGGG
T ss_pred cc---ccccCCcCcCCHHHH
Confidence 21 234589999999974
No 314
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.76 E-value=1.5e-18 Score=184.87 Aligned_cols=148 Identities=29% Similarity=0.395 Sum_probs=114.0
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch--HHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA--MALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l 751 (827)
++|+..+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++..++..++...
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 57888899999999999999875 689999999865432 224678899999999999999999999987765444222
Q ss_pred ccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 752 HST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 752 ~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
+.. ...+.+.....++.++++||+||| +.+|+||||||+||+ |||+++........
T Consensus 83 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~ 159 (299)
T 2r3i_A 83 FLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH---SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 159 (299)
T ss_dssp CCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSBC
T ss_pred cccCCHHHHHHhhhccCCCHHHHHHHHHHHHHHHHHHH---HCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCccc
Confidence 211 134667778889999999999996 568999999999998 99999876433221
Q ss_pred ccccceeccccccccc
Q 047196 811 IQTETLVTIGYMAPGL 826 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~ 826 (827)
.....||+.|+|||+
T Consensus 160 -~~~~~~~~~y~aPE~ 174 (299)
T 2r3i_A 160 -YTHEVVTLWYRAPEI 174 (299)
T ss_dssp -TTSCBCCCTTCCHHH
T ss_pred -cCcccccccccCcHH
Confidence 233458999999996
No 315
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.76 E-value=1e-18 Score=188.38 Aligned_cols=148 Identities=26% Similarity=0.361 Sum_probs=112.5
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccch--------HHHHHHHHHHHHHHhcCCCCceEEEeeeecCC
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA--------MALKSFEAECEVMKNIRHRNHVKRISSCSNED 744 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--------~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~ 744 (827)
.++|...+.||+|+||.||+|+.. +|+.||||++..... .....+.+|++++++++||||+++++++..+.
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 467899999999999999999865 689999999864321 12345889999999999999999999987665
Q ss_pred cee-eeeecc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccc
Q 047196 745 FKA-LDCLHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGR 802 (827)
Q Consensus 745 ~~~-l~~l~~--------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~ 802 (827)
..+ ++++.. ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++
T Consensus 89 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~ 165 (322)
T 2ycf_A 89 YYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK 165 (322)
T ss_dssp EEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSSSCCEEECCCTTCE
T ss_pred eEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCCHHHEEEecCCCCCeEEEccCccce
Confidence 322 233221 1235677788899999999999996 568999999999998 899987
Q ss_pred cccCCCccccccceeccccccccc
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
....... .....||+.|+|||+
T Consensus 166 ~~~~~~~--~~~~~gt~~y~aPE~ 187 (322)
T 2ycf_A 166 ILGETSL--MRTLCGTPTYLAPEV 187 (322)
T ss_dssp ECCCCHH--HHHHHSCCTTCCHHH
T ss_pred ecccccc--cccccCCcCccCchh
Confidence 7643221 122358999999996
No 316
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.76 E-value=2.4e-18 Score=192.91 Aligned_cols=145 Identities=21% Similarity=0.322 Sum_probs=113.8
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhc------CCCCceEEEeeeecCCcee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNI------RHRNHVKRISSCSNEDFKA 747 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l------~H~niv~~~~~~~~~~~~~ 747 (827)
.+|+..++||+|+||.||+|+.. +++.||||++... ....+.+.+|+++++.+ .|+|++++++++......+
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~ 175 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNE-KRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHIC 175 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCc-cchHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEE
Confidence 46888999999999999999865 5899999999654 33456788899999888 4669999999998776554
Q ss_pred eeeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------eecccccc
Q 047196 748 LDCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------DFGIGRLL 804 (827)
Q Consensus 748 l~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------DFGla~~~ 804 (827)
+...+.. ...+++.....++.++++||+||| +.+|+||||||+||| |||+|+..
T Consensus 176 lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~ 252 (429)
T 3kvw_A 176 MTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALH---KNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYE 252 (429)
T ss_dssp EEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HHTEECSCCSGGGEEESSTTSCCEEECCCTTCEET
T ss_pred EEEeccCCCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeEEccCCCcceEEeecccceec
Confidence 4322211 123778888999999999999997 458999999999998 99998764
Q ss_pred cCCCccccccceecccccccccC
Q 047196 805 TGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 805 ~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
.... ...+||++|||||++
T Consensus 253 ~~~~----~~~~gt~~y~aPE~~ 271 (429)
T 3kvw_A 253 HQRV----YTYIQSRFYRAPEVI 271 (429)
T ss_dssp TCCC----CSSCSCGGGCCHHHH
T ss_pred CCcc----cccCCCCCccChHHH
Confidence 3221 234689999999973
No 317
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.75 E-value=7.1e-19 Score=187.63 Aligned_cols=149 Identities=26% Similarity=0.324 Sum_probs=112.8
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeeec
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCLH 752 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l~ 752 (827)
.++|+..+.||+|+||.||+|+.. +|+.||+|++........+.+.+|++++++++||||+++++++...+..++...+
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 97 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEF 97 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEEC
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEe
Confidence 467888999999999999999975 5899999999765555567899999999999999999999999876654442222
Q ss_pred c-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCccc
Q 047196 753 S-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSMI 811 (827)
Q Consensus 753 ~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~~ 811 (827)
. ....+++.....++.++++|+.||| +.+|+||||||+||+ |||+++....... .
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-~ 173 (302)
T 2j7t_A 98 CPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ-K 173 (302)
T ss_dssp CTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-C
T ss_pred CCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh---cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-c
Confidence 1 1245778888899999999999996 568999999999998 9998764321111 1
Q ss_pred cccceeccccccccc
Q 047196 812 QTETLVTIGYMAPGL 826 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~ 826 (827)
.....||+.|+|||+
T Consensus 174 ~~~~~~~~~y~aPE~ 188 (302)
T 2j7t_A 174 RDSFIGTPYWMAPEV 188 (302)
T ss_dssp -----CCGGGCCHHH
T ss_pred cccccCChhhcCCee
Confidence 122458999999996
No 318
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.75 E-value=4.3e-18 Score=197.95 Aligned_cols=172 Identities=28% Similarity=0.383 Sum_probs=100.7
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|+.|++++|.+.. +| .+..+++|+.|+|++|++++..| +..+++|+.|+|++|.+.+ +| .+..+++|+.|+|+
T Consensus 44 ~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls 117 (605)
T 1m9s_A 44 SIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLE 117 (605)
T ss_dssp TCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECT
T ss_pred CCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEec
Confidence 45555555555543 22 35555666666666666655443 5556666666666666653 22 45556666666666
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++ + +.+..+++|+.|+|++|.+++. ..+..+++|+.|+|++|.+++..| +..++.|+.|+|++|+|++.
T Consensus 118 ~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l- 190 (605)
T 1m9s_A 118 HNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL- 190 (605)
T ss_dssp TSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-
T ss_pred CCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCCC-
Confidence 666653 2 3355666666666666666654 445566666666666666666555 56666666666666666653
Q ss_pred cccccCCCCCCEEECCCCcceeecCC
Q 047196 541 PSTIGDLKDLQNISLACNGLEGLIPE 566 (827)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~g~ip~ 566 (827)
+.+..+++|+.|+|++|++++....
T Consensus 191 -~~l~~l~~L~~L~L~~N~l~~~p~~ 215 (605)
T 1m9s_A 191 -RALAGLKNLDVLELFSQECLNKPIN 215 (605)
T ss_dssp -GGGTTCTTCSEEECCSEEEECCCCC
T ss_pred -hHHccCCCCCEEEccCCcCcCCccc
Confidence 2466666666666666666654333
No 319
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.75 E-value=2.3e-18 Score=186.05 Aligned_cols=158 Identities=21% Similarity=0.299 Sum_probs=117.4
Q ss_pred cchhHHHHHhhccccc-ceEecCCceEEEEEEec-CCcEEEEEEEcccch--HHHHHHHHHHHHHHhcC-CCCceEEEee
Q 047196 665 FSYQDLFRATEKFSKE-NLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA--MALKSFEAECEVMKNIR-HRNHVKRISS 739 (827)
Q Consensus 665 ~~~~~~~~~~~~~~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~--~~~~~~~~Ei~~l~~l~-H~niv~~~~~ 739 (827)
..++......+.|... +.||+|+||.||+|+.. +|+.||||++..... ....++.+|++++++++ ||||++++++
T Consensus 18 ~~~~~~~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~ 97 (327)
T 3lm5_A 18 LYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEV 97 (327)
T ss_dssp CCSBCHHHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEE
T ss_pred hHHHHHHhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEE
Confidence 3344445555667766 88999999999999865 689999999875432 23567899999999995 5999999999
Q ss_pred eecCCceee--eeecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------
Q 047196 740 CSNEDFKAL--DCLHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------- 796 (827)
Q Consensus 740 ~~~~~~~~l--~~l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------- 796 (827)
+......++ +++.. ....+++.+...++.++++||+||| +.+|+||||||+||+
T Consensus 98 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH---~~givH~Dikp~NIl~~~~~~~~~~k 174 (327)
T 3lm5_A 98 YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLH---QNNIVHLDLKPQNILLSSIYPLGDIK 174 (327)
T ss_dssp EECSSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEESCBTTBCCEE
T ss_pred EEeCCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---HCCeecCcCChHHEEEecCCCCCcEE
Confidence 987765444 22211 1245778889999999999999996 568999999999998
Q ss_pred --eecccccccCCCccccccceecccccccccC
Q 047196 797 --DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 --DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++....... .....||++|+|||++
T Consensus 175 L~Dfg~a~~~~~~~~--~~~~~gt~~y~aPE~~ 205 (327)
T 3lm5_A 175 IVDFGMSRKIGHACE--LREIMGTPEYLAPEIL 205 (327)
T ss_dssp ECCGGGCEEC-----------CCCGGGCCHHHH
T ss_pred EeeCccccccCCccc--cccccCCcCccCCeee
Confidence 8999887643322 1234589999999963
No 320
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.75 E-value=5.3e-18 Score=173.13 Aligned_cols=154 Identities=23% Similarity=0.250 Sum_probs=82.7
Q ss_pred ccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCC
Q 047196 382 LENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAG 461 (827)
Q Consensus 382 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 461 (827)
.+.++.++++++ .+|..+. ++|+.|+|++|++++..|..|..+++|++|+|++|++.+..+..|..+++|++|+|++
T Consensus 21 ~~~v~c~~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~ 97 (229)
T 3e6j_A 21 GTTVDCRSKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGT 97 (229)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEeEccCCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCC
Confidence 456666666665 3444332 5566666666666665555566666666666666665544334445555555555555
Q ss_pred CcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeeccc
Q 047196 462 NKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIP 541 (827)
Q Consensus 462 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip 541 (827)
|++++..+..+..+++|++|+|++|.++ .+|..+..+++|+.|+|++|+|++..+
T Consensus 98 N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-------------------------~lp~~~~~l~~L~~L~L~~N~l~~~~~ 152 (229)
T 3e6j_A 98 NQLTVLPSAVFDRLVHLKELFMCCNKLT-------------------------ELPRGIERLTHLTHLALDQNQLKSIPH 152 (229)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCC-------------------------SCCTTGGGCTTCSEEECCSSCCCCCCT
T ss_pred CcCCccChhHhCcchhhCeEeccCCccc-------------------------ccCcccccCCCCCEEECCCCcCCccCH
Confidence 5555443444444444554444444444 334444455555555555555554444
Q ss_pred ccccCCCCCCEEECCCCcceee
Q 047196 542 STIGDLKDLQNISLACNGLEGL 563 (827)
Q Consensus 542 ~~~~~l~~L~~L~Ls~N~l~g~ 563 (827)
..+..+++|+.|+|++|.+.+.
T Consensus 153 ~~~~~l~~L~~L~l~~N~~~c~ 174 (229)
T 3e6j_A 153 GAFDRLSSLTHAYLFGNPWDCE 174 (229)
T ss_dssp TTTTTCTTCCEEECTTSCBCTT
T ss_pred HHHhCCCCCCEEEeeCCCccCC
Confidence 4555555555555555555443
No 321
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.75 E-value=1.1e-18 Score=185.80 Aligned_cols=149 Identities=26% Similarity=0.400 Sum_probs=111.7
Q ss_pred hcccccceEecCCceEEEEEEecC----CcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-c--e
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHD----GIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED-F--K 746 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~----g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-~--~ 746 (827)
..|...++||+|+||.||+|+..+ +..||||++... .....+++.+|++++++++|||||+++++|...+ . .
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 357778999999999999998642 346899998753 3445678999999999999999999999975543 2 2
Q ss_pred eeeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 747 ALDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 747 ~l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
+++++.. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.....
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~lH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 181 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDK 181 (298)
T ss_dssp EEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCG
T ss_pred EEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCchheEEECCCCCEEECccccccccccc
Confidence 3333322 2334677888899999999999996 568999999999998 99999876433
Q ss_pred Ccc---ccccceeccccccccc
Q 047196 808 RSM---IQTETLVTIGYMAPGL 826 (827)
Q Consensus 808 ~~~---~~~~~~gt~~Y~APE~ 826 (827)
... ......||+.|+|||+
T Consensus 182 ~~~~~~~~~~~~~~~~y~aPE~ 203 (298)
T 3f66_A 182 EYYSVHNKTGAKLPVKWMALES 203 (298)
T ss_dssp GGCBC-----CCBCGGGSCHHH
T ss_pred chhccccccCCCCCccccChHH
Confidence 211 1222347889999996
No 322
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.75 E-value=4.6e-18 Score=180.26 Aligned_cols=145 Identities=22% Similarity=0.372 Sum_probs=66.3
Q ss_pred cEEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcC
Q 047196 99 RVTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLD 178 (827)
Q Consensus 99 ~v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~ 178 (827)
+++.|+++++.+... +.+..+++|++|+|++|++++..| +..+++|++|+|++|.+++. | .+..+++|++|+++
T Consensus 47 ~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~L~ 120 (291)
T 1h6t_A 47 SIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKDL-S-SLKDLKKLKSLSLE 120 (291)
T ss_dssp TCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCG-G-GGTTCTTCCEEECT
T ss_pred cccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCCC-h-hhccCCCCCEEECC
Confidence 455566666655543 235556666666666666654333 55566666666666665542 1 24445555555555
Q ss_pred CCCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEccccccc
Q 047196 179 SDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLR 256 (827)
Q Consensus 179 ~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 256 (827)
+|.+++ ++ .+. .+++|++|++++|.+++. ..++.+++|++|++++|.+++..| +..+++|++|++++|.++
T Consensus 121 ~n~i~~-~~-~l~-~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~ 191 (291)
T 1h6t_A 121 HNGISD-IN-GLV-HLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS 191 (291)
T ss_dssp TSCCCC-CG-GGG-GCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC
T ss_pred CCcCCC-Ch-hhc-CCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC
Confidence 554443 21 111 122444444444444332 233344444444444444433222 333444444444444443
No 323
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.75 E-value=2.9e-18 Score=190.46 Aligned_cols=143 Identities=24% Similarity=0.395 Sum_probs=102.5
Q ss_pred hccccc-ceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHH-hcCCCCceEEEeeeec----CCce-
Q 047196 675 EKFSKE-NLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMK-NIRHRNHVKRISSCSN----EDFK- 746 (827)
Q Consensus 675 ~~~~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~-~l~H~niv~~~~~~~~----~~~~- 746 (827)
++|... ++||+|+||+||+|+.. +|+.||||++... ..+.+|++++. ..+|||||++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~ 135 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 135 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEE
Confidence 455554 68999999999999865 6899999998643 34678888874 5589999999998754 2222
Q ss_pred -eeeeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccc
Q 047196 747 -ALDCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGR 802 (827)
Q Consensus 747 -~l~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~ 802 (827)
+++++... ...+++.....|+.++++||+||| +.+|+||||||+||| |||+++
T Consensus 136 lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~ 212 (400)
T 1nxk_A 136 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 212 (400)
T ss_dssp EEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCcCcceEEEecCCCCccEEEEeccccc
Confidence 23333211 124778888999999999999996 468999999999998 999998
Q ss_pred cccCCCccccccceecccccccccC
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
....... ....+||++|+|||++
T Consensus 213 ~~~~~~~--~~~~~gt~~y~aPE~~ 235 (400)
T 1nxk_A 213 ETTSHNS--LTTPCYTPYYVAPEVL 235 (400)
T ss_dssp ECC-------------CTTCCGGGS
T ss_pred ccCCCCc--cccCCCCCCccCHhhc
Confidence 6543322 2335689999999985
No 324
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.75 E-value=1.9e-18 Score=184.23 Aligned_cols=149 Identities=26% Similarity=0.384 Sum_probs=109.1
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC--------
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED-------- 744 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-------- 744 (827)
.++|+..+.||+|+||.||+|+.. +|+.||||++... ....+.+.+|++++++++|||++++++++.+..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTA 83 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC----
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcc
Confidence 467899999999999999999864 7899999998653 344578999999999999999999999886531
Q ss_pred -----ce--eeeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------ee
Q 047196 745 -----FK--ALDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DF 798 (827)
Q Consensus 745 -----~~--~l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DF 798 (827)
.. .+++... ......+.....++.++++|++||| +.+|+||||||+||+ ||
T Consensus 84 ~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dlkp~Nil~~~~~~~kl~df 160 (303)
T 1zy4_A 84 VKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDF 160 (303)
T ss_dssp --CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTSCEEECCC
T ss_pred cccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHHHH---hCCeecccCCHHhEEEcCCCCEEEeeC
Confidence 11 1222211 1223456677789999999999996 568999999999998 99
Q ss_pred cccccccCCC-------------ccccccceeccccccccc
Q 047196 799 GIGRLLTGDR-------------SMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 799 Gla~~~~~~~-------------~~~~~~~~gt~~Y~APE~ 826 (827)
|+++...... ........||+.|+|||+
T Consensus 161 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~ 201 (303)
T 1zy4_A 161 GLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEV 201 (303)
T ss_dssp CCCSCTTC-------------------------CTTSCHHH
T ss_pred cchhhcccccchhccccccccccccccccCCCcccccCccc
Confidence 9998654221 011123458999999996
No 325
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.75 E-value=1.3e-18 Score=204.96 Aligned_cols=151 Identities=25% Similarity=0.395 Sum_probs=112.9
Q ss_pred hhcccccceEecCCceEEEEEEec----CCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCc-ee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH----DGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDF-KA 747 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~-~~ 747 (827)
.++|...+.||+|+||.||+|++. .+..||||++... .....+.|.+|+.++++++|||||++++++.+... .+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~~~~~lv 468 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVITENPVWII 468 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEEE
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCceEEE
Confidence 356888899999999999999864 2567999998653 33445789999999999999999999999865442 22
Q ss_pred eeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 748 LDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 748 l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
++++.. ....+++.....++.++++||+||| +.+|+||||||+||| |||+++......
T Consensus 469 ~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~ 545 (656)
T 2j0j_A 469 MELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST 545 (656)
T ss_dssp EECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC--
T ss_pred EEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---hCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc
Confidence 333321 1235778888899999999999996 468999999999998 999998765433
Q ss_pred ccccccceecccccccccC
Q 047196 809 SMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~~~~~~gt~~Y~APE~l 827 (827)
........+|+.|||||++
T Consensus 546 ~~~~~~~~~t~~y~aPE~~ 564 (656)
T 2j0j_A 546 YYKASKGKLPIKWMAPESI 564 (656)
T ss_dssp --------CCGGGCCHHHH
T ss_pred ceeccCCCCCcceeCHHHh
Confidence 2222223478899999963
No 326
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.75 E-value=2.8e-18 Score=183.80 Aligned_cols=148 Identities=29% Similarity=0.413 Sum_probs=105.9
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc---chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN---CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|...+.||+|+||.||+|+. .+|+.||||++... .....+++.+|++++++++||||+++++++...+..++..
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 5788899999999999999986 57899999998642 2445678999999999999999999999998776554432
Q ss_pred eccC--------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccC
Q 047196 751 LHST--------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTG 806 (827)
Q Consensus 751 l~~~--------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~ 806 (827)
.+.. ...+++.....++.++++||+||| +.+|+||||||+||+ |||+++....
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~ 188 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 188 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTSCEEECCC--------
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHh---hCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecC
Confidence 2221 233567778899999999999996 568999999999998 9999887644
Q ss_pred CCccccccceeccccccccc
Q 047196 807 DRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~ 826 (827)
.... .....||+.|+|||+
T Consensus 189 ~~~~-~~~~~~~~~y~aPE~ 207 (310)
T 2wqm_A 189 KTTA-AHSLVGTPYYMSPER 207 (310)
T ss_dssp -----------CCSSCCHHH
T ss_pred CCcc-ccccCCCeeEeChHH
Confidence 3221 122458999999996
No 327
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.75 E-value=1.7e-18 Score=188.84 Aligned_cols=147 Identities=18% Similarity=0.335 Sum_probs=117.1
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccchH-----------------HHHHHHHHHHHHHhcCCCCceEEE
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAM-----------------ALKSFEAECEVMKNIRHRNHVKRI 737 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~-----------------~~~~~~~Ei~~l~~l~H~niv~~~ 737 (827)
++|...+.||+|+||.||+|+. +|+.||||++...... ..+.+.+|++++++++||||++++
T Consensus 31 ~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~ 109 (348)
T 2pml_X 31 NDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCE 109 (348)
T ss_dssp TTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCS
T ss_pred CceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEE
Confidence 5788899999999999999998 8999999998643211 117899999999999999999999
Q ss_pred eeeecCCceee--eeecc--------------C--CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---
Q 047196 738 SSCSNEDFKAL--DCLHS--------------T--NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--- 796 (827)
Q Consensus 738 ~~~~~~~~~~l--~~l~~--------------~--~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--- 796 (827)
+++...+..++ ++... . ...+++.....++.++++|++|||. .++|+||||||+||+
T Consensus 110 ~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~~i~H~dl~p~Nil~~~ 187 (348)
T 2pml_X 110 GIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDK 187 (348)
T ss_dssp EEEESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHH--TSCEECCCCCGGGEEECT
T ss_pred EEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhc--cCCEeecCCChHhEEEcC
Confidence 99987765443 22111 1 3456788889999999999999974 378999999999998
Q ss_pred -------eecccccccCCCccccccceecccccccccC
Q 047196 797 -------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 -------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++...... .....||+.|+|||++
T Consensus 188 ~~~~kl~dfg~~~~~~~~~---~~~~~~~~~y~aPE~~ 222 (348)
T 2pml_X 188 NGRVKLSDFGESEYMVDKK---IKGSRGTYEFMPPEFF 222 (348)
T ss_dssp TSCEEECCCTTCEECBTTE---ECSSCSCGGGCCGGGG
T ss_pred CCcEEEecccccccccccc---ccCCCCCcCccCchhh
Confidence 999998764431 2334589999999974
No 328
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.75 E-value=5.1e-18 Score=184.45 Aligned_cols=152 Identities=27% Similarity=0.447 Sum_probs=117.4
Q ss_pred HHhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHh--cCCCCceEEEeeeecCC----c
Q 047196 672 RATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKN--IRHRNHVKRISSCSNED----F 745 (827)
Q Consensus 672 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~--l~H~niv~~~~~~~~~~----~ 745 (827)
...++|...+.||+|+||.||+|+. +|+.||||++... ..+.+.+|+++++. ++||||+++++++.... .
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~---~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~ 114 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQ 114 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG---GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCC
T ss_pred cccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch---hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccce
Confidence 3456799999999999999999987 4899999998643 23567889999988 78999999999987764 2
Q ss_pred eee--eeeccC-------CCCCCHHHHHHHHHHHHHHHHHHHhc-----CCCCeEEccCCCccee----------eeccc
Q 047196 746 KAL--DCLHST-------NCSLNIFDKLNIMIDVASALEYLHFS-----HSTPVIHCDLKPKNVF----------DFGIG 801 (827)
Q Consensus 746 ~~l--~~l~~~-------~~~l~~~~~~~i~~~ia~~L~~Lh~~-----h~~~iiHrDlK~~NIl----------DFGla 801 (827)
.++ ++.... ...+++.+...++.++++|++|||.. ++++|+||||||+||+ |||++
T Consensus 115 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~ 194 (342)
T 1b6c_B 115 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194 (342)
T ss_dssp EEEEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTC
T ss_pred eEEEEeecCCCcHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCc
Confidence 233 322211 13467788899999999999999832 2789999999999998 99999
Q ss_pred ccccCCCcc---ccccceecccccccccC
Q 047196 802 RLLTGDRSM---IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 802 ~~~~~~~~~---~~~~~~gt~~Y~APE~l 827 (827)
+........ ......||+.|+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 223 (342)
T 1b6c_B 195 VRHDSATDTIDIAPNHRVGTKRYMAPEVL 223 (342)
T ss_dssp EEEETTTTEEEECCCSCCCCGGGCCHHHH
T ss_pred eeccccccccccccccCCcCcccCCHhhh
Confidence 877544322 12234589999999963
No 329
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.75 E-value=4.7e-19 Score=194.81 Aligned_cols=149 Identities=26% Similarity=0.418 Sum_probs=103.2
Q ss_pred cccccceEecCCceEEEEEEec--CC--cEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-c--ee
Q 047196 676 KFSKENLIGVGSFGSVYKGRLH--DG--IEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSNED-F--KA 747 (827)
Q Consensus 676 ~~~~~~~iG~G~fg~Vy~~~~~--~g--~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-~--~~ 747 (827)
.|...++||+|+||.||+|++. ++ ..||||++... .....++|.+|++++++++|||||+++++|...+ . .+
T Consensus 90 ~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv 169 (373)
T 3c1x_A 90 IVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVV 169 (373)
T ss_dssp EEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEE
T ss_pred eeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEE
Confidence 3566789999999999999863 22 46899998643 3345678999999999999999999999976533 2 23
Q ss_pred eeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 748 LDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 748 l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
++++.. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 170 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~ 246 (373)
T 3c1x_A 170 LPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLA---SKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKE 246 (373)
T ss_dssp EECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEECTTCCEEECCC----------
T ss_pred EECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH---HCCEecCccchheEEECCCCCEEEeeccccccccccc
Confidence 333322 1234677788899999999999996 568999999999998 999998764332
Q ss_pred cc---ccccceecccccccccC
Q 047196 809 SM---IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~---~~~~~~gt~~Y~APE~l 827 (827)
.. ......+|++|+|||++
T Consensus 247 ~~~~~~~~~~~~~~~y~aPE~~ 268 (373)
T 3c1x_A 247 FDSVHNKTGAKLPVKWMALESL 268 (373)
T ss_dssp -----------CCGGGSCHHHH
T ss_pred cccccccCCCCCcccccChHHh
Confidence 11 11223478899999963
No 330
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.75 E-value=2.6e-18 Score=186.35 Aligned_cols=149 Identities=30% Similarity=0.438 Sum_probs=106.3
Q ss_pred hcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHH--HHHHHHHhcCCCCceEEEeeeecC----C---c
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFE--AECEVMKNIRHRNHVKRISSCSNE----D---F 745 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~--~Ei~~l~~l~H~niv~~~~~~~~~----~---~ 745 (827)
++|...+.||+|+||.||+|+. +++.||||++..... +.+. .|+..++.++|+||+++++.+... . +
T Consensus 13 ~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~ 88 (336)
T 3g2f_A 13 DNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYL 88 (336)
T ss_dssp TSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEE
T ss_pred HHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEE
Confidence 5788899999999999999976 578999999865432 2334 444445568999999999865431 1 1
Q ss_pred eeeeeeccC-------CCCCCHHHHHHHHHHHHHHHHHHHhcC------CCCeEEccCCCccee----------eecccc
Q 047196 746 KALDCLHST-------NCSLNIFDKLNIMIDVASALEYLHFSH------STPVIHCDLKPKNVF----------DFGIGR 802 (827)
Q Consensus 746 ~~l~~l~~~-------~~~l~~~~~~~i~~~ia~~L~~Lh~~h------~~~iiHrDlK~~NIl----------DFGla~ 802 (827)
.+++++... .....+.....++.++++||+|||..+ .++|+||||||+||| |||+|+
T Consensus 89 lv~e~~~~g~L~~~l~~~~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~ 168 (336)
T 3g2f_A 89 LVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSM 168 (336)
T ss_dssp EEECCCTTCBHHHHHHHCCBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCE
T ss_pred EEEecCCCCcHHHHHhhcccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeecccee
Confidence 223333221 123467778899999999999997542 339999999999998 999998
Q ss_pred cccCCCc-------cccccceecccccccccC
Q 047196 803 LLTGDRS-------MIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~-------~~~~~~~gt~~Y~APE~l 827 (827)
.+..... ......+||+.|+|||++
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 200 (336)
T 3g2f_A 169 RLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL 200 (336)
T ss_dssp ECSSSSCC---------CCTTSCGGGCCHHHH
T ss_pred ecccccccCccccccccccCCCccceeCchhh
Confidence 7653321 111234589999999963
No 331
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.75 E-value=1.3e-18 Score=188.99 Aligned_cols=149 Identities=25% Similarity=0.265 Sum_probs=113.9
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc-hHHHHHHHHHHHH-HHhcCCCCceEEEeeeecCCceeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC-AMALKSFEAECEV-MKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~-~~~~~~~~~Ei~~-l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
.++|+..+.||+|+||.||+|+. .+|+.||||++.... .....++..|+.+ ++.++|||||++++++..++..++..
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 35788889999999999999986 578999999997542 2334556666665 78889999999999998776544422
Q ss_pred ecc-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 751 LHS-------------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 751 l~~-------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
.+. ....+++.....++.++++||+|||.. .+|+||||||+||+ |||+++.....
T Consensus 130 e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~--~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~ 207 (340)
T 3an0_A 130 ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSK--LSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDS 207 (340)
T ss_dssp CCCSEEHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHH--TCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCH
T ss_pred HHhhCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeeCCCceecccc
Confidence 221 234577888889999999999999742 37999999999998 99999876432
Q ss_pred Cccccccceeccccccccc
Q 047196 808 RSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~ 826 (827)
.. .....||++|+|||+
T Consensus 208 ~~--~~~~~gt~~y~aPE~ 224 (340)
T 3an0_A 208 VA--KTIDAGCKPYMAPER 224 (340)
T ss_dssp HH--HHHSSCCCCCCCHHH
T ss_pred cc--cccCCCCccccCccc
Confidence 11 122458999999996
No 332
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.74 E-value=2.1e-18 Score=183.56 Aligned_cols=148 Identities=24% Similarity=0.356 Sum_probs=111.9
Q ss_pred cccccceEecCCceEEEEEEec-C---CcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce---e
Q 047196 676 KFSKENLIGVGSFGSVYKGRLH-D---GIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK---A 747 (827)
Q Consensus 676 ~~~~~~~iG~G~fg~Vy~~~~~-~---g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~---~ 747 (827)
.|...++||+|+||.||+|+.. + +..||||++.... ....+.|.+|++++++++|||||++++++...+.. +
T Consensus 22 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v 101 (298)
T 3pls_A 22 VTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVL 101 (298)
T ss_dssp EEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEE
T ss_pred EEccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEE
Confidence 4556689999999999999853 2 2379999987543 34567899999999999999999999999765432 2
Q ss_pred eeeec---------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCC
Q 047196 748 LDCLH---------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDR 808 (827)
Q Consensus 748 l~~l~---------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~ 808 (827)
+++.. .....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 102 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 102 LPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYLA---EQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp ECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred EecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 22221 11345677888899999999999996 568999999999998 999998654322
Q ss_pred cc---ccccceeccccccccc
Q 047196 809 SM---IQTETLVTIGYMAPGL 826 (827)
Q Consensus 809 ~~---~~~~~~gt~~Y~APE~ 826 (827)
.. ......+|+.|+|||+
T Consensus 179 ~~~~~~~~~~~~~~~y~aPE~ 199 (298)
T 3pls_A 179 YYSVQQHRHARLPVKWTALES 199 (298)
T ss_dssp GGCSCCSSCTTCGGGGSCHHH
T ss_pred ccccccCcCCCCCccccChhh
Confidence 11 1122347899999996
No 333
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.74 E-value=1.2e-18 Score=184.88 Aligned_cols=149 Identities=26% Similarity=0.385 Sum_probs=105.5
Q ss_pred hcccccceEecCCceEEEEEEec--CCc--EEEEEEEccc---chHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCcee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH--DGI--EVAIKVFHQN---CAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKA 747 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~--~g~--~vAvK~l~~~---~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~ 747 (827)
++|+..+.||+|+||.||+|++. +++ .||||++... .....+.+.+|++++++++||||+++++++..+...+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 97 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPPMKM 97 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCEE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCCcee
Confidence 57888899999999999999853 333 6999998643 2334678999999999999999999999998765332
Q ss_pred -eeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 748 -LDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 748 -l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
+++... ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++.....
T Consensus 98 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 174 (291)
T 1u46_A 98 VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQN 174 (291)
T ss_dssp EEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-
T ss_pred eEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHHHHHH---hCCcccCCCchheEEEcCCCCEEEcccccccccccc
Confidence 222221 1234677788899999999999996 568999999999998 99999877544
Q ss_pred Cccc--cccceeccccccccc
Q 047196 808 RSMI--QTETLVTIGYMAPGL 826 (827)
Q Consensus 808 ~~~~--~~~~~gt~~Y~APE~ 826 (827)
.... .....+|++|+|||+
T Consensus 175 ~~~~~~~~~~~~~~~y~aPE~ 195 (291)
T 1u46_A 175 DDHYVMQEHRKVPFAWCAPES 195 (291)
T ss_dssp CCEEEC-----CCGGGCCHHH
T ss_pred ccchhhhccCCCCceeeCchh
Confidence 3221 122347889999996
No 334
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.74 E-value=5e-18 Score=187.62 Aligned_cols=148 Identities=24% Similarity=0.336 Sum_probs=116.0
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcC-CCC-----ceEEEeeeecCCce
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIR-HRN-----HVKRISSCSNEDFK 746 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~-H~n-----iv~~~~~~~~~~~~ 746 (827)
.++|...+.||+|+||.||+|+.. +|+.||||++... .....++.+|+++++.++ |++ +|++.+++...+..
T Consensus 53 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 131 (382)
T 2vx3_A 53 MDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNK-KAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHL 131 (382)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEE
T ss_pred eeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEecc-HHHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCce
Confidence 467899999999999999999865 6889999999754 334567888999999886 553 89999998776655
Q ss_pred eeeeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee------------eeccccc
Q 047196 747 ALDCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------DFGIGRL 803 (827)
Q Consensus 747 ~l~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------DFGla~~ 803 (827)
++...+.. ...+++.....++.+++.||+|||. |+.+|+||||||+||| |||+|+.
T Consensus 132 ~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~-~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~ 210 (382)
T 2vx3_A 132 CLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLAT-PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQ 210 (382)
T ss_dssp EEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTS-TTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEE
T ss_pred EEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhcc-CCCCEEcCCCCcccEEEecCCCCcEEEEeccCcee
Confidence 44322211 1346788888999999999999974 5789999999999998 9999987
Q ss_pred ccCCCccccccceecccccccccC
Q 047196 804 LTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 804 ~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
..... ...+||+.|+|||++
T Consensus 211 ~~~~~----~~~~~t~~y~aPE~~ 230 (382)
T 2vx3_A 211 LGQRI----YQYIQSRFYRSPEVL 230 (382)
T ss_dssp TTCCC----CSSCSCGGGCCHHHH
T ss_pred ccccc----ccccCCccccChHHH
Confidence 64321 234689999999973
No 335
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.74 E-value=3.2e-18 Score=181.63 Aligned_cols=150 Identities=24% Similarity=0.433 Sum_probs=111.3
Q ss_pred hcccccc-eEecCCceEEEEEEe---cCCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCce-e
Q 047196 675 EKFSKEN-LIGVGSFGSVYKGRL---HDGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFK-A 747 (827)
Q Consensus 675 ~~~~~~~-~iG~G~fg~Vy~~~~---~~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~-~ 747 (827)
++|...+ .||+|+||.||+|.+ .+++.||||++.... ....+++.+|++++++++||||+++++++..+... +
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv 95 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLV 95 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEESSSEEEE
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEECCCCcEEE
Confidence 4567666 899999999999964 246889999986542 23457899999999999999999999999554432 2
Q ss_pred eeeecc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCc
Q 047196 748 LDCLHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRS 809 (827)
Q Consensus 748 l~~l~~--------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~ 809 (827)
+++... ....+++.....++.++++||+||| +.+|+||||||+||+ |||+++.......
T Consensus 96 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 172 (291)
T 1xbb_A 96 MEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN 172 (291)
T ss_dssp EECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS
T ss_pred EEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHH---hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC
Confidence 222221 1234778888999999999999996 568999999999998 9999987654433
Q ss_pred ccc--ccceecccccccccC
Q 047196 810 MIQ--TETLVTIGYMAPGLL 827 (827)
Q Consensus 810 ~~~--~~~~gt~~Y~APE~l 827 (827)
... ....+|+.|+|||++
T Consensus 173 ~~~~~~~~~~~~~y~aPE~~ 192 (291)
T 1xbb_A 173 YYKAQTHGKWPVKWYAPECI 192 (291)
T ss_dssp EEEC----CCCGGGCCHHHH
T ss_pred cccccccCCCCceeeChHHh
Confidence 211 122367899999963
No 336
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.74 E-value=3.7e-18 Score=179.80 Aligned_cols=152 Identities=27% Similarity=0.369 Sum_probs=113.0
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEccc--chHHHHHHHHHHHHHHhcCCCCceEEEeeeecC--Ccee-
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQN--CAMALKSFEAECEVMKNIRHRNHVKRISSCSNE--DFKA- 747 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~--~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~--~~~~- 747 (827)
.++|+..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||+++++++... ...+
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 84 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYI 84 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEE
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEE
Confidence 367888999999999999999875 6899999999653 234567899999999999999999999987542 2222
Q ss_pred -eeeeccC------------CCCCCHHHHHHHHHHHHHHHHHHHhcC--CCCeEEccCCCccee----------eecccc
Q 047196 748 -LDCLHST------------NCSLNIFDKLNIMIDVASALEYLHFSH--STPVIHCDLKPKNVF----------DFGIGR 802 (827)
Q Consensus 748 -l~~l~~~------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h--~~~iiHrDlK~~NIl----------DFGla~ 802 (827)
+++.... ...+++.....++.++++||+|||... ..+|+||||||+||+ |||+++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~ 164 (279)
T 2w5a_A 85 VMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLAR 164 (279)
T ss_dssp EEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHH
T ss_pred EEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchhe
Confidence 2332211 123778888999999999999998643 244999999999998 999988
Q ss_pred cccCCCccccccceeccccccccc
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
........ .....||+.|+|||+
T Consensus 165 ~~~~~~~~-~~~~~~~~~y~aPE~ 187 (279)
T 2w5a_A 165 ILNHDTSF-AKTFVGTPYYMSPEQ 187 (279)
T ss_dssp HC---CHH-HHHHHSCCTTCCHHH
T ss_pred eecccccc-ccccCCCccccChHH
Confidence 76543221 122358999999996
No 337
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.74 E-value=3.1e-18 Score=181.38 Aligned_cols=149 Identities=26% Similarity=0.411 Sum_probs=117.9
Q ss_pred HhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~ 749 (827)
..++|...+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++......++.
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467999999999999999999875 68999999986432 23456789999999999999999999999877655443
Q ss_pred eeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccC
Q 047196 750 CLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTG 806 (827)
Q Consensus 750 ~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~ 806 (827)
..+.. ...+++.+...++.++++||+||| +.+|+||||||+||+ |||+++....
T Consensus 100 ~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~ 176 (287)
T 2wei_A 100 GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQ 176 (287)
T ss_dssp ECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCC
T ss_pred EEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeccCCChhhEEEecCCCcccEEEeccCcceeecC
Confidence 32221 134677788899999999999996 568999999999998 8998876643
Q ss_pred CCccccccceeccccccccc
Q 047196 807 DRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 807 ~~~~~~~~~~gt~~Y~APE~ 826 (827)
.... ....||+.|+|||+
T Consensus 177 ~~~~--~~~~~~~~y~aPE~ 194 (287)
T 2wei_A 177 NTKM--KDRIGTAYYIAPEV 194 (287)
T ss_dssp CSSC--SCHHHHHTTCCHHH
T ss_pred CCcc--ccccCcccccChHH
Confidence 3221 22348999999996
No 338
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.74 E-value=4.3e-19 Score=195.81 Aligned_cols=146 Identities=16% Similarity=0.216 Sum_probs=105.1
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc---chHHHHHHHHHH---HHHHhcCCCCceEEE-------ee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN---CAMALKSFEAEC---EVMKNIRHRNHVKRI-------SS 739 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~---~~~~~~~~~~Ei---~~l~~l~H~niv~~~-------~~ 739 (827)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.|.+|+ +++++++|||||+++ ++
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~ 151 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDL 151 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEE
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhh
Confidence 45788889999999999999996 56999999998632 334567899999 566666899999987 44
Q ss_pred eecCC-------------------ceeeeeeccC-------CC-------CCCHHHHHHHHHHHHHHHHHHHhcCCCCeE
Q 047196 740 CSNED-------------------FKALDCLHST-------NC-------SLNIFDKLNIMIDVASALEYLHFSHSTPVI 786 (827)
Q Consensus 740 ~~~~~-------------------~~~l~~l~~~-------~~-------~l~~~~~~~i~~~ia~~L~~Lh~~h~~~ii 786 (827)
+..++ +..+++.... .. .+.+..+..|+.|+++||+||| +.+|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~iv 228 (377)
T 3byv_A 152 VKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGLV 228 (377)
T ss_dssp EECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHH---HTTEE
T ss_pred hhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHH---hCCee
Confidence 43331 1112222110 00 1113556779999999999996 46899
Q ss_pred EccCCCccee----------eecccccccCCCccccccceecccccccccC
Q 047196 787 HCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 787 HrDlK~~NIl----------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
||||||+||| |||+|+.... .....+| ++|+|||++
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG~a~~~~~----~~~~~~g-~~y~aPE~~ 274 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFEHLVRDGA----RVVSSVS-RGFEPPELE 274 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGGGCEETTC----EEECCCC-TTCCCHHHH
T ss_pred cCCCCHHHEEEcCCCCEEEEechhheecCC----cccCCCC-cCccChhhh
Confidence 9999999998 9999985322 1223457 999999974
No 339
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.74 E-value=1.6e-18 Score=187.04 Aligned_cols=158 Identities=27% Similarity=0.352 Sum_probs=113.8
Q ss_pred cchhHHHHHhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhc-CCCCceEEEeeeec
Q 047196 665 FSYQDLFRATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNI-RHRNHVKRISSCSN 742 (827)
Q Consensus 665 ~~~~~~~~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~ 742 (827)
+...++....++|+..+.||+|+||.||+|+. .+|+.||||++.... ...+.+.+|+++++++ +||||+++++++..
T Consensus 14 ~~~~~l~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 92 (326)
T 2x7f_A 14 IDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG-DEEEEIKQEINMLKKYSHHRNIATYYGAFIK 92 (326)
T ss_dssp --CCCCCCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-STTHHHHHHHHHHHHHCCSTTBCCEEEEEEE
T ss_pred ccchhccCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc-ccHHHHHHHHHHHHhccCCCCeeeeeeEEee
Confidence 33444445667899999999999999999986 478999999986543 2346789999999999 79999999999876
Q ss_pred C------Ccee--eeeecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------
Q 047196 743 E------DFKA--LDCLHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------- 796 (827)
Q Consensus 743 ~------~~~~--l~~l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------- 796 (827)
. ...+ +++... ....++......++.+++.||+||| +.+|+||||||+||+
T Consensus 93 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~k 169 (326)
T 2x7f_A 93 KNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH---QHKVIHRDIKGQNVLLTENAEVK 169 (326)
T ss_dssp CC--CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEE
T ss_pred ccCccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCccccCCcHHHEEEcCCCCEE
Confidence 3 2222 233221 1134667778889999999999996 568999999999998
Q ss_pred --eecccccccCCCccccccceecccccccccC
Q 047196 797 --DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 --DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++........ .....||+.|+|||++
T Consensus 170 l~Dfg~~~~~~~~~~~-~~~~~~~~~y~aPE~~ 201 (326)
T 2x7f_A 170 LVDFGVSAQLDRTVGR-RNTFIGTPYWMAPEVI 201 (326)
T ss_dssp ECCCTTTC--------------CCGGGCCHHHH
T ss_pred EeeCcCceecCcCccc-cccccCCccccChhhh
Confidence 99998776432221 1234589999999963
No 340
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.74 E-value=6.2e-18 Score=182.66 Aligned_cols=149 Identities=24% Similarity=0.273 Sum_probs=99.7
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHH-HHHhcCCCCceEEEeeeecCCceee--e
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECE-VMKNIRHRNHVKRISSCSNEDFKAL--D 749 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~-~l~~l~H~niv~~~~~~~~~~~~~l--~ 749 (827)
++|...+.||+|+||.||+|+.. +|+.||||++.... .....++.+|+. +++.++|||||++++++...+..++ +
T Consensus 22 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e 101 (327)
T 3aln_A 22 EDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME 101 (327)
T ss_dssp CSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred HHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEe
Confidence 57888899999999999999874 68999999997543 334455666666 7788899999999999987765443 2
Q ss_pred eecc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCC
Q 047196 750 CLHS------------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGD 807 (827)
Q Consensus 750 ~l~~------------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~ 807 (827)
+... ....+.+.....++.++++|+.|||.. .+|+||||||+||+ |||+++.....
T Consensus 102 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~ 179 (327)
T 3aln_A 102 LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS 179 (327)
T ss_dssp CCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCSSSCC----
T ss_pred ecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCCCceecccc
Confidence 2221 134567778889999999999999742 27999999999998 99999876543
Q ss_pred CccccccceecccccccccC
Q 047196 808 RSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 808 ~~~~~~~~~gt~~Y~APE~l 827 (827)
.. .....||+.|+|||++
T Consensus 180 ~~--~~~~~gt~~y~aPE~~ 197 (327)
T 3aln_A 180 IA--KTRDAGCRPYMAPERI 197 (327)
T ss_dssp --------------------
T ss_pred cc--cccCCCCccccCceee
Confidence 22 1223589999999974
No 341
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.73 E-value=1.1e-19 Score=210.24 Aligned_cols=216 Identities=16% Similarity=0.119 Sum_probs=125.0
Q ss_pred CCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEE-ccCCcC
Q 047196 314 SLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIY-ISNCNI 392 (827)
Q Consensus 314 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~-Ls~N~l 392 (827)
..++|+.|+|+.|+++ .+|..++++++|+.|++++|......|.. +..+...+..|..++.+. +|+.|+ ++.|.+
T Consensus 347 ~~~~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~l--l~~~~~~~~~~~~l~~l~-~L~~L~~l~~n~~ 422 (567)
T 1dce_A 347 TDEQLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILL--MRALDPLLYEKETLQYFS-TLKAVDPMRAAYL 422 (567)
T ss_dssp TTTTSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHH--HHHHCTGGGHHHHHHHHH-HHHHHCGGGHHHH
T ss_pred cCccceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHH--HHhcccccCCHHHHHHHH-hcccCcchhhccc
Confidence 5677888888888886 67888888888888887665421111100 001111222333333332 333333 222221
Q ss_pred ccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccc
Q 047196 393 GGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCL 472 (827)
Q Consensus 393 ~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 472 (827)
.+|..+.+++|.+++..+ ..|+.|+|++|++++ +|. +..+++|+.|+|++|+++ .+|..+
T Consensus 423 -----------~~L~~l~l~~n~i~~l~~------~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~ 482 (567)
T 1dce_A 423 -----------DDLRSKFLLENSVLKMEY------ADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPAL 482 (567)
T ss_dssp -----------HHHHHHHHHHHHHHHHHH------TTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGG
T ss_pred -----------chhhhhhhhcccccccCc------cCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhh
Confidence 123333344445443222 246777777777775 555 777777777777777777 667777
Q ss_pred cCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCC-cccccccccCceEEcccceeeeccccc---ccCCC
Q 047196 473 GNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPL-SLDIGNLRVVIGINLSRNNFSGDIPST---IGDLK 548 (827)
Q Consensus 473 ~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~ip~~---~~~l~ 548 (827)
+.+++|+.|+|++|.+++ +| .+..+++|+.|+|++|++++.+ |..++.++.|+.|+|++|+|++.+|.. +..++
T Consensus 483 ~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp 560 (567)
T 1dce_A 483 AALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLP 560 (567)
T ss_dssp GGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCT
T ss_pred hcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCc
Confidence 777777777777777776 45 5666666666666666666665 666666666666666666666554422 22355
Q ss_pred CCCEEEC
Q 047196 549 DLQNISL 555 (827)
Q Consensus 549 ~L~~L~L 555 (827)
+|+.||+
T Consensus 561 ~L~~L~l 567 (567)
T 1dce_A 561 SVSSILT 567 (567)
T ss_dssp TCSEEEC
T ss_pred ccCccCC
Confidence 5555543
No 342
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.73 E-value=6.9e-18 Score=181.09 Aligned_cols=148 Identities=29% Similarity=0.335 Sum_probs=112.4
Q ss_pred HhhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l 751 (827)
..++|+..+.||+|+||.||+|+.. +|+.||||++.... ..+++.+|++++++++||||+++++++......++...
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 104 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVME 104 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEee
Confidence 3467888999999999999999875 58999999986543 24578999999999999999999999987765444222
Q ss_pred cc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 752 HS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 752 ~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
+. ....+++.....++.+++.|+.||| +.+|+||||||+||+ |||+++........
T Consensus 105 ~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~ 181 (314)
T 3com_A 105 YCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH---FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAK 181 (314)
T ss_dssp CCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSC
T ss_pred cCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccc
Confidence 21 1345778888999999999999996 568999999999998 99999876543221
Q ss_pred ccccceeccccccccc
Q 047196 811 IQTETLVTIGYMAPGL 826 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~ 826 (827)
.....||+.|+|||+
T Consensus 182 -~~~~~~~~~y~aPE~ 196 (314)
T 3com_A 182 -RNTVIGTPFWMAPEV 196 (314)
T ss_dssp -BCCCCSCGGGCCHHH
T ss_pred -cCccCCCCCccChhh
Confidence 223458999999996
No 343
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.73 E-value=3.2e-18 Score=181.89 Aligned_cols=149 Identities=26% Similarity=0.409 Sum_probs=110.7
Q ss_pred HhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecC-Cceee--
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNE-DFKAL-- 748 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~-~~~~l-- 748 (827)
..++|+..+.||+|+||.||+|+. .+++.||||++.... ..+++.+|++++++++|++++..++.+... +..++
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT--KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccc--cchHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEE
Confidence 456799999999999999999986 578999999875432 224578999999999999988888777543 33232
Q ss_pred eeec--------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCC
Q 047196 749 DCLH--------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGD 807 (827)
Q Consensus 749 ~~l~--------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~ 807 (827)
++.. .....+++.....++.++++||+||| +.+|+||||||+||+ |||+++.....
T Consensus 85 e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH---~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~ 161 (296)
T 4hgt_A 85 ELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDA 161 (296)
T ss_dssp ECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCT
T ss_pred EccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCc
Confidence 3221 11345788889999999999999996 568999999999998 99999876543
Q ss_pred Ccc------ccccceeccccccccc
Q 047196 808 RSM------IQTETLVTIGYMAPGL 826 (827)
Q Consensus 808 ~~~------~~~~~~gt~~Y~APE~ 826 (827)
... ......||+.|+|||+
T Consensus 162 ~~~~~~~~~~~~~~~gt~~y~aPE~ 186 (296)
T 4hgt_A 162 RTHQHIPYRENKNLTGTARYASINT 186 (296)
T ss_dssp TTCCBCCCCCSCCCCSCGGGCCHHH
T ss_pred ccCccCCCCcccccCCCccccchHH
Confidence 321 1123458999999996
No 344
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.73 E-value=3.9e-18 Score=181.30 Aligned_cols=148 Identities=26% Similarity=0.411 Sum_probs=113.6
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecC-Ccee--ee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNE-DFKA--LD 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~-~~~~--l~ 749 (827)
.++|...+.||+|+||.||+|+. .+|+.||||++..... .+++.+|++++++++|+++++.+.++... ...+ ++
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e 85 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVME 85 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEE
Confidence 46788999999999999999986 5789999999865432 24688999999999999988877776443 3222 23
Q ss_pred eec--------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCCC
Q 047196 750 CLH--------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDR 808 (827)
Q Consensus 750 ~l~--------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~~ 808 (827)
+.. .....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++......
T Consensus 86 ~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~ 162 (296)
T 3uzp_A 86 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIH---SKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDAR 162 (296)
T ss_dssp CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred ecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH---hCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccc
Confidence 321 11345778888999999999999996 568999999999998 999998765443
Q ss_pred cc------ccccceeccccccccc
Q 047196 809 SM------IQTETLVTIGYMAPGL 826 (827)
Q Consensus 809 ~~------~~~~~~gt~~Y~APE~ 826 (827)
.. ......||+.|+|||+
T Consensus 163 ~~~~~~~~~~~~~~gt~~y~aPE~ 186 (296)
T 3uzp_A 163 THQHIPYRENKNLTGTARYASINT 186 (296)
T ss_dssp TCCBCCCCCSCCCCSCTTTCCHHH
T ss_pred cccccccccccccccccccCChhh
Confidence 21 1123458999999996
No 345
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.73 E-value=2.9e-18 Score=186.77 Aligned_cols=150 Identities=19% Similarity=0.221 Sum_probs=107.5
Q ss_pred hcccccceEecCCceEEEEEEec----CCcEEEEEEEcccchH-----------HHHHHHHHHHHHHhcCCCCceEEEee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH----DGIEVAIKVFHQNCAM-----------ALKSFEAECEVMKNIRHRNHVKRISS 739 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~----~g~~vAvK~l~~~~~~-----------~~~~~~~Ei~~l~~l~H~niv~~~~~ 739 (827)
++|...+.||+|+||.||+|+.. ++..||||+....... ..+.+.+|+..++.++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 56888999999999999999875 5788999998654311 12347789999999999999999999
Q ss_pred eec----CCceee--eeecc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------
Q 047196 740 CSN----EDFKAL--DCLHS-------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------- 796 (827)
Q Consensus 740 ~~~----~~~~~l--~~l~~-------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------- 796 (827)
+.. ....++ ++... ....+++.+...++.++++||+||| +.+|+||||||+||+
T Consensus 117 ~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~Dlkp~NIll~~~~~~~~k 193 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIH---ENEYVHGDIKAANLLLGYKNPDQVY 193 (345)
T ss_dssp EEEESSSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEEESSSTTSEE
T ss_pred cccccCCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---hCCeeCCCcCHHHEEEccCCCCcEE
Confidence 876 333332 33210 1225788899999999999999996 568999999999998
Q ss_pred --eecccccccCCCcc------ccccceecccccccccC
Q 047196 797 --DFGIGRLLTGDRSM------IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 --DFGla~~~~~~~~~------~~~~~~gt~~Y~APE~l 827 (827)
|||+|+.+...... ......||+.|+|||++
T Consensus 194 L~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 232 (345)
T 2v62_A 194 LADYGLSYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAH 232 (345)
T ss_dssp ECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTTCCHHHH
T ss_pred EEeCCCceecccccccccchhccccccCCCccccCHHHh
Confidence 99999876432211 11234589999999963
No 346
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.73 E-value=5.2e-18 Score=183.27 Aligned_cols=148 Identities=28% Similarity=0.462 Sum_probs=110.4
Q ss_pred hcccccceEecCCceEEEEEEec-CCcE--EEEEEEcccc-hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIE--VAIKVFHQNC-AMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKALD 749 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~--vAvK~l~~~~-~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l~ 749 (827)
++|...+.||+|+||.||+|+.. +|.. ||||++.... ....+.+.+|+++++++ +||||+++++++...+..++.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 57888899999999999999864 5664 4999986532 33456789999999999 899999999999887755443
Q ss_pred eeccC--------------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------
Q 047196 750 CLHST--------------------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------- 796 (827)
Q Consensus 750 ~l~~~--------------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------- 796 (827)
..+.. ...+++.+...++.++++||+||| +.+|+||||||+||+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS---QKQFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCccceEEEcCCCeE
Confidence 22211 124677888999999999999996 578999999999998
Q ss_pred ---eecccccccCCCccccccceecccccccccC
Q 047196 797 ---DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ---DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++....... .....+|+.|+|||++
T Consensus 182 kL~Dfg~~~~~~~~~~--~~~~~~~~~y~aPE~~ 213 (327)
T 1fvr_A 182 KIADFGLSRGQEVYVK--KTMGRLPVRWMAIESL 213 (327)
T ss_dssp EECCTTCEESSCEECC--C----CCTTTCCHHHH
T ss_pred EEcccCcCcccccccc--ccCCCCCccccChhhh
Confidence 9999874322111 1223468899999963
No 347
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.73 E-value=5.1e-18 Score=178.74 Aligned_cols=143 Identities=27% Similarity=0.430 Sum_probs=104.3
Q ss_pred hhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeecCC-cee--eee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSNED-FKA--LDC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~-~~~--l~~ 750 (827)
.++|+..+.||+|+||.||+|+.. |+.||||++.... ..+.+.+|++++++++|||+|++++++.+.. ..+ +++
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~ 96 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 96 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEec
Confidence 357888999999999999999875 7899999986543 4567899999999999999999999976543 222 232
Q ss_pred eccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
..... ..+++.....++.++++|++||| +.+|+||||||+||+ |||+++......
T Consensus 97 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~-- 171 (278)
T 1byg_A 97 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE---GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-- 171 (278)
T ss_dssp CTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH---HTTCCCSCCSGGGEEECTTSCEEECCCCC----------
T ss_pred CCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH---hCCccccCCCcceEEEeCCCcEEEeeccccccccccc--
Confidence 22110 11566677889999999999996 568999999999998 999987654321
Q ss_pred ccccceeccccccccc
Q 047196 811 IQTETLVTIGYMAPGL 826 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~ 826 (827)
....+++.|+|||+
T Consensus 172 --~~~~~~~~y~aPE~ 185 (278)
T 1byg_A 172 --DTGKLPVKWTAPEA 185 (278)
T ss_dssp ------CCTTTSCHHH
T ss_pred --cCCCccccccCHHH
Confidence 12347889999996
No 348
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.73 E-value=2.9e-18 Score=184.66 Aligned_cols=148 Identities=25% Similarity=0.315 Sum_probs=115.5
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccch------HHHHHHHHHHHHHHhcC--CCCceEEEeeeecCC
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCA------MALKSFEAECEVMKNIR--HRNHVKRISSCSNED 744 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~Ei~~l~~l~--H~niv~~~~~~~~~~ 744 (827)
.++|...+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++ |+|++++++++..++
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~ 121 (320)
T 3a99_A 42 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPD 121 (320)
T ss_dssp TTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSS
T ss_pred cCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCC
Confidence 45688899999999999999986 4689999999865321 12245778999999997 599999999998876
Q ss_pred ceeeeeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------eecccc
Q 047196 745 FKALDCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DFGIGR 802 (827)
Q Consensus 745 ~~~l~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DFGla~ 802 (827)
..++...+.. ...+++.....++.++++||+||| +.+|+||||||+||+ |||+++
T Consensus 122 ~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~ 198 (320)
T 3a99_A 122 SFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCH---NCGVLHRDIKDENILIDLNRGELKLIDFGSGA 198 (320)
T ss_dssp EEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEETTTTEEEECCCTTCE
T ss_pred cEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH---HCCcEeCCCCHHHEEEeCCCCCEEEeeCcccc
Confidence 5544332221 235677788899999999999996 568999999999998 999998
Q ss_pred cccCCCccccccceecccccccccC
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
....... ....||+.|+|||++
T Consensus 199 ~~~~~~~---~~~~gt~~y~aPE~~ 220 (320)
T 3a99_A 199 LLKDTVY---TDFDGTRVYSPPEWI 220 (320)
T ss_dssp ECCSSCB---CCCCSCGGGSCHHHH
T ss_pred ccccccc---cCCCCCccCCChHHh
Confidence 7653321 234589999999963
No 349
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.73 E-value=1.1e-18 Score=186.16 Aligned_cols=150 Identities=25% Similarity=0.318 Sum_probs=99.3
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDCL 751 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~l 751 (827)
.++|...+.||+|+||.||+|+.. +++.||||++.... ....+++.+|++++++++||||+++++++...+..++...
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 93 (303)
T 2vwi_A 14 RDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMK 93 (303)
T ss_dssp CCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEE
T ss_pred hhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEeh
Confidence 467888999999999999999864 68999999986432 3345678999999999999999999999987765544222
Q ss_pred ccC------------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eeccccc
Q 047196 752 HST------------------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRL 803 (827)
Q Consensus 752 ~~~------------------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~ 803 (827)
+.. ...+++.....++.++++|++||| +.+|+||||||+||+ |||+++.
T Consensus 94 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~ 170 (303)
T 2vwi_A 94 LLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAF 170 (303)
T ss_dssp CCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEEECTTCCEEECCCHHHHH
T ss_pred hccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHH---hCCCCCCCCChhhEEEcCCCCEEEEeccchhe
Confidence 211 234678888999999999999996 568999999999998 9999877
Q ss_pred ccCCCcc----ccccceeccccccccc
Q 047196 804 LTGDRSM----IQTETLVTIGYMAPGL 826 (827)
Q Consensus 804 ~~~~~~~----~~~~~~gt~~Y~APE~ 826 (827)
....... ......||+.|+|||+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~y~aPE~ 197 (303)
T 2vwi_A 171 LATGGDITRNKVRKTFVGTPCWMAPEV 197 (303)
T ss_dssp CC---------------CCCTTCCHHH
T ss_pred eccCCCccchhhhcccCCCccccCHHH
Confidence 6433211 1122458999999996
No 350
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.73 E-value=1.9e-18 Score=190.25 Aligned_cols=147 Identities=14% Similarity=0.157 Sum_probs=94.3
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhc--CCCCceEEEe-------ee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNI--RHRNHVKRIS-------SC 740 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l--~H~niv~~~~-------~~ 740 (827)
...|...+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.+ +|||+|+++. .+
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~ 140 (371)
T 3q60_A 61 ERKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAV 140 (371)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEE
T ss_pred ceeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehhe
Confidence 345888899999999999999965 78999999997643 23456788885555444 6999888553 22
Q ss_pred ecCC-------------------ceeeeeecc--------CCCCCCHHHH------HHHHHHHHHHHHHHHhcCCCCeEE
Q 047196 741 SNED-------------------FKALDCLHS--------TNCSLNIFDK------LNIMIDVASALEYLHFSHSTPVIH 787 (827)
Q Consensus 741 ~~~~-------------------~~~l~~l~~--------~~~~l~~~~~------~~i~~~ia~~L~~Lh~~h~~~iiH 787 (827)
.... +.+++++.. ....+.+..+ ..++.++++||+||| +.+|+|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~aL~~LH---~~~ivH 217 (371)
T 3q60_A 141 AVQSQPPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQ---SKGLVH 217 (371)
T ss_dssp EETTSCSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHHHHH---HTTEEE
T ss_pred ecCCCCCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHHHHHHHH---HCCCcc
Confidence 2111 122222221 0111233334 677899999999996 568999
Q ss_pred ccCCCccee----------eecccccccCCCccccccceecccccccccC
Q 047196 788 CDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 788 rDlK~~NIl----------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||||+||| |||+|+...... ....+|+.|+|||++
T Consensus 218 rDikp~NIll~~~~~~kL~DFG~a~~~~~~~----~~~~~t~~y~aPE~~ 263 (371)
T 3q60_A 218 GHFTPDNLFIMPDGRLMLGDVSALWKVGTRG----PASSVPVTYAPREFL 263 (371)
T ss_dssp TTCSGGGEEECTTSCEEECCGGGEEETTCEE----EGGGSCGGGCCHHHH
T ss_pred CcCCHHHEEECCCCCEEEEecceeeecCCCc----cCccCCcCCcChhhc
Confidence 999999998 999998654221 134477999999973
No 351
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.72 E-value=4.8e-18 Score=183.30 Aligned_cols=149 Identities=28% Similarity=0.451 Sum_probs=111.1
Q ss_pred HhhcccccceEecCCceEEEEEEe--cCCcEEEEEEEcccch--HHHHHHHHHHHHHHhc---CCCCceEEEeeeec---
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRL--HDGIEVAIKVFHQNCA--MALKSFEAECEVMKNI---RHRNHVKRISSCSN--- 742 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~--~~~~~~~~Ei~~l~~l---~H~niv~~~~~~~~--- 742 (827)
+.++|+..+.||+|+||.||+|+. .+|+.||||++..... .....+.+|+++++++ +||||+++++++..
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 457899999999999999999987 3688999999864321 1223567788877776 89999999999862
Q ss_pred --CCcee--eeeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eec
Q 047196 743 --EDFKA--LDCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFG 799 (827)
Q Consensus 743 --~~~~~--l~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFG 799 (827)
....+ +++... ....+.+.....++.++++||+||| +.+|+||||||+||+ |||
T Consensus 89 ~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~gi~H~dlkp~Nili~~~~~~kl~Dfg 165 (326)
T 1blx_A 89 DRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH---SHRVVHRDLKPQNILVTSSGQIKLADFG 165 (326)
T ss_dssp SSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCCGGGEEECTTCCEEECSCC
T ss_pred CCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH---HCCceeccCCHHHeEEcCCCCEEEecCc
Confidence 22222 222221 1123677888899999999999996 568999999999998 999
Q ss_pred ccccccCCCccccccceeccccccccc
Q 047196 800 IGRLLTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 800 la~~~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
+++...... ......||+.|+|||+
T Consensus 166 ~~~~~~~~~--~~~~~~~~~~y~aPE~ 190 (326)
T 1blx_A 166 LARIYSFQM--ALTSVVVTLWYRAPEV 190 (326)
T ss_dssp SCCCCCGGG--GGCCCCCCCTTCCHHH
T ss_pred ccccccCCC--CccccccccceeCHHH
Confidence 998654322 1233458999999996
No 352
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.72 E-value=2.2e-18 Score=188.29 Aligned_cols=144 Identities=13% Similarity=0.232 Sum_probs=108.6
Q ss_pred hcccccceEecCCceEEEEEEecC---------CcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceE----------
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLHD---------GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVK---------- 735 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~---------- 735 (827)
++|...+.||+|+||.||+|+... ++.||||++... +.+.+|++++++++|||+|+
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~ 116 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPL 116 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCc
Confidence 578889999999999999998753 789999998654 35789999999999999987
Q ss_pred -----EEeeeec-CCceee--eeecc--------C-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--
Q 047196 736 -----RISSCSN-EDFKAL--DCLHS--------T-NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-- 796 (827)
Q Consensus 736 -----~~~~~~~-~~~~~l--~~l~~--------~-~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-- 796 (827)
+++++.. ....++ ++... . ...+++.+...++.++++||+||| +.+|+||||||+||+
T Consensus 117 ~~i~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH---~~~ivH~Dikp~NIl~~ 193 (352)
T 2jii_A 117 LAIPTCMGFGVHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLH---ENEYVHGNVTAENIFVD 193 (352)
T ss_dssp CSCCCCCEEEEETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHH---HTTCBCSCCCGGGEEEE
T ss_pred cCccchhhccccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHH---hCCccCCCCCHHHEEEc
Confidence 4556554 333222 33210 1 245788889999999999999996 568999999999998
Q ss_pred ----------eecccccccCCCcc------ccccceeccccccccc
Q 047196 797 ----------DFGIGRLLTGDRSM------IQTETLVTIGYMAPGL 826 (827)
Q Consensus 797 ----------DFGla~~~~~~~~~------~~~~~~gt~~Y~APE~ 826 (827)
|||+++.+...... ......||+.|+|||+
T Consensus 194 ~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~ 239 (352)
T 2jii_A 194 PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDL 239 (352)
T ss_dssp TTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHH
T ss_pred CCCCceEEEecCcceeeccCCCccccccccccccccCCccccCHHH
Confidence 99999876432211 1123358999999996
No 353
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.72 E-value=1.3e-17 Score=179.23 Aligned_cols=150 Identities=22% Similarity=0.278 Sum_probs=102.0
Q ss_pred hhcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc-hH-HHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC-AM-ALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~-~~-~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
.++|+..+.||+|+||.||+|+.. +|+.||||++.... .. ..+.+..+..+++.++||||+++++++...+..++..
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 357888899999999999999875 68999999996542 22 2334455566788999999999999998877554432
Q ss_pred eccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+.. ...+.+.....++.++++||+|||.. .+|+||||||+||+ |||+++.......
T Consensus 104 e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 180 (318)
T 2dyl_A 104 ELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA- 180 (318)
T ss_dssp CCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH--HCCCCCCCCGGGEEECTTSCEEECCCTTC---------
T ss_pred eccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh--CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc-
Confidence 2211 24567778889999999999999742 27999999999998 9999876644322
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
.....||+.|+|||++
T Consensus 181 -~~~~~~~~~y~aPE~~ 196 (318)
T 2dyl_A 181 -KDRSAGCAAYMAPERI 196 (318)
T ss_dssp -------CCTTCCHHHH
T ss_pred -ccccCCCccccChhhc
Confidence 1234589999999973
No 354
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.72 E-value=3.9e-18 Score=182.92 Aligned_cols=149 Identities=25% Similarity=0.320 Sum_probs=109.0
Q ss_pred HHhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccch------HHHHHHHHHHHHHHhc----CCCCceEEEeee
Q 047196 672 RATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCA------MALKSFEAECEVMKNI----RHRNHVKRISSC 740 (827)
Q Consensus 672 ~~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~------~~~~~~~~Ei~~l~~l----~H~niv~~~~~~ 740 (827)
...++|...+.||+|+||.||+|+. .+|+.||||++..... .....+.+|+++++++ +|+||+++++++
T Consensus 28 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~ 107 (312)
T 2iwi_A 28 AFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF 107 (312)
T ss_dssp -----CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC
T ss_pred hhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE
Confidence 3456799999999999999999986 4689999999865432 1223467899999999 899999999998
Q ss_pred ecCCceeeeeec-c----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------ee
Q 047196 741 SNEDFKALDCLH-S----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-----------DF 798 (827)
Q Consensus 741 ~~~~~~~l~~l~-~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-----------DF 798 (827)
...+..++...+ . ....+++.....++.++++||+||| +.+|+||||||+||+ ||
T Consensus 108 ~~~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~kl~df 184 (312)
T 2iwi_A 108 ETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCH---SRGVVHRDIKDENILIDLRRGCAKLIDF 184 (312)
T ss_dssp -----CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH---HHTEECCCCSGGGEEEETTTTEEEECCC
T ss_pred ecCCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---HCCeeecCCChhhEEEeCCCCeEEEEEc
Confidence 766544432222 1 1234778888999999999999997 457999999999998 99
Q ss_pred cccccccCCCccccccceeccccccccc
Q 047196 799 GIGRLLTGDRSMIQTETLVTIGYMAPGL 826 (827)
Q Consensus 799 Gla~~~~~~~~~~~~~~~gt~~Y~APE~ 826 (827)
|+++....... ....||++|+|||+
T Consensus 185 g~~~~~~~~~~---~~~~~~~~y~aPE~ 209 (312)
T 2iwi_A 185 GSGALLHDEPY---TDFDGTRVYSPPEW 209 (312)
T ss_dssp SSCEECCSSCB---CCCCSCTTTSCHHH
T ss_pred chhhhcccCcc---cccCCcccccCcee
Confidence 99887654322 23458999999996
No 355
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.72 E-value=6.6e-18 Score=189.76 Aligned_cols=145 Identities=26% Similarity=0.375 Sum_probs=102.4
Q ss_pred ccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceeeeeeccCC
Q 047196 677 FSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKALDCLHSTN 755 (827)
Q Consensus 677 ~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l~~l~~~~ 755 (827)
|...++||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +|||||++++++......++...+...
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~g 93 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNL 93 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCCC
Confidence 44567899999999987766679999999986532 34678999999987 899999999998877755443222110
Q ss_pred ---------CC-------CCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-----------------------
Q 047196 756 ---------CS-------LNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------------------- 796 (827)
Q Consensus 756 ---------~~-------l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------------------- 796 (827)
.. ..+.....++.++++||+||| +.+|+||||||+||+
T Consensus 94 sL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH---~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~ 170 (434)
T 2rio_A 94 NLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170 (434)
T ss_dssp EHHHHHHTC------------CCHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEEC
T ss_pred CHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHH---HCCccccCCChHhEEEecCcccccccccCCCceEEEEc
Confidence 00 112234679999999999996 568999999999986
Q ss_pred eecccccccCCCccc---cccceecccccccccC
Q 047196 797 DFGIGRLLTGDRSMI---QTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 DFGla~~~~~~~~~~---~~~~~gt~~Y~APE~l 827 (827)
|||+|+......... ....+||++|+|||++
T Consensus 171 DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~ 204 (434)
T 2rio_A 171 DFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELL 204 (434)
T ss_dssp CCTTCEECCC--------------CCTTSCHHHH
T ss_pred ccccceecCCCCccceeeecCCCCCCCccCHHHh
Confidence 789888765433211 1234599999999963
No 356
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.72 E-value=7.7e-18 Score=167.71 Aligned_cols=154 Identities=16% Similarity=0.200 Sum_probs=86.2
Q ss_pred cCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCc
Q 047196 401 SNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRS 480 (827)
Q Consensus 401 ~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 480 (827)
..+++|+.|++++|.++ .+| .+..+++|++|++++|.++ .+..+..+++|++|++++|++++..|..+..+++|++
T Consensus 41 ~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~ 116 (197)
T 4ezg_A 41 AQMNSLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTL 116 (197)
T ss_dssp HHHHTCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCE
T ss_pred hhcCCccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCE
Confidence 34455555555555555 233 3555555555555555443 2234555566666666666665555555666666666
Q ss_pred cccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecccccccCCCCCCEEECCCCcc
Q 047196 481 PDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDIPSTIGDLKDLQNISLACNGL 560 (827)
Q Consensus 481 L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l 560 (827)
|++++|.+++..|..+..+++|+.|++++|.+.+.+| .+..++.|+.|++++|++++ ++ .+..+++|+.|++++|++
T Consensus 117 L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~-~~-~l~~l~~L~~L~l~~N~i 193 (197)
T 4ezg_A 117 LDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHD-YR-GIEDFPKLNQLYAFSQTI 193 (197)
T ss_dssp EECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCC-CT-TGGGCSSCCEEEECBC--
T ss_pred EEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcC-hH-HhccCCCCCEEEeeCccc
Confidence 6666666665555556666666666666665223334 45566666666666666664 33 556666666666666665
Q ss_pred e
Q 047196 561 E 561 (827)
Q Consensus 561 ~ 561 (827)
.
T Consensus 194 ~ 194 (197)
T 4ezg_A 194 G 194 (197)
T ss_dssp -
T ss_pred C
Confidence 4
No 357
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=1.7e-17 Score=173.05 Aligned_cols=167 Identities=19% Similarity=0.249 Sum_probs=119.6
Q ss_pred EEEEEcCCCCCccccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCC
Q 047196 100 VTALNISSLNLQGTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDS 179 (827)
Q Consensus 100 v~~L~L~~~~l~g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~ 179 (827)
++.++++.+.+++.. .+..+++|++|++++|+++ .+| .+..+++|++|+|++|++++..+ +..+++|++|++++
T Consensus 21 l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~ 94 (263)
T 1xeu_A 21 AVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVNR 94 (263)
T ss_dssp HHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECCS
T ss_pred HHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECCC
Confidence 445566677766543 5777888888888888887 445 67888888888888888887655 77778888888888
Q ss_pred CCCCCCcchhHhhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccc
Q 047196 180 DKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEI 259 (827)
Q Consensus 180 n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~ 259 (827)
|++++ +|.... ++|++|++++|.+++. ..+.++++|+.|++++|++++. | .++.+++|++|++++|++++.
T Consensus 95 N~l~~-l~~~~~---~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 95 NRLKN-LNGIPS---ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SCCSC-CTTCCC---SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CccCC-cCcccc---CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 87774 443222 4777777777777753 2477777777777777777754 3 567777777777777777755
Q ss_pred cccccCcCCCcEEEeecccCccc
Q 047196 260 PHEIGYLPNLENLVLGFNNLVGV 282 (827)
Q Consensus 260 p~~~~~l~~L~~L~Ls~N~l~~~ 282 (827)
..+..+++|++|++++|.+++.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 5677777777777777777654
No 358
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.71 E-value=1.4e-17 Score=184.89 Aligned_cols=118 Identities=22% Similarity=0.322 Sum_probs=93.2
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC--------CCCceEEEeeeec---
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR--------HRNHVKRISSCSN--- 742 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~--------H~niv~~~~~~~~--- 742 (827)
++|...+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|++++++++ |+|||++++++..
T Consensus 37 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~ 115 (397)
T 1wak_A 37 GRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSA-EHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGV 115 (397)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEET
T ss_pred CeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecC-CcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCC
Confidence 5788899999999999999986 46899999999654 344567899999999997 7789999998862
Q ss_pred -CCceee--eeecc---------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEEccCCCccee
Q 047196 743 -EDFKAL--DCLHS---------TNCSLNIFDKLNIMIDVASALEYLHFSHST-PVIHCDLKPKNVF 796 (827)
Q Consensus 743 -~~~~~l--~~l~~---------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~-~iiHrDlK~~NIl 796 (827)
....++ +++.. ....+++.....|+.|+++||+|||. + +|+||||||+|||
T Consensus 116 ~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~givHrDikp~NIl 179 (397)
T 1wak_A 116 NGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHT---KCRIIHTDIKPENIL 179 (397)
T ss_dssp TEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECCCCSGGGEE
T ss_pred CCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCCHHHee
Confidence 222222 22211 11347788889999999999999974 4 8999999999986
No 359
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2.3e-17 Score=164.26 Aligned_cols=155 Identities=17% Similarity=0.196 Sum_probs=131.0
Q ss_pred hcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCcccccccccc
Q 047196 376 GNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLN 455 (827)
Q Consensus 376 ~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~ 455 (827)
..+. +|+.|++++|.++ .+| .+..+++|+.|++++|.++. +..+..+++|++|++++|++++..|..+..+++|+
T Consensus 41 ~~l~-~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~ 115 (197)
T 4ezg_A 41 AQMN-SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLT 115 (197)
T ss_dssp HHHH-TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCC
T ss_pred hhcC-CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCC
Confidence 3444 7999999999998 566 68889999999999997753 34788999999999999999988888999999999
Q ss_pred EEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccce
Q 047196 456 TLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNN 535 (827)
Q Consensus 456 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~ 535 (827)
+|++++|++++..|..+..+++|++|++++|.+.+.+| .+..+++|+.|++++|.+++. + .+..++.|+.|++++|+
T Consensus 116 ~L~Ls~n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~-~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 116 LLDISHSAHDDSILTKINTLPKVNSIDLSYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-R-GIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp EEECCSSBCBGGGHHHHTTCSSCCEEECCSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-T-TGGGCSSCCEEEECBC-
T ss_pred EEEecCCccCcHhHHHHhhCCCCCEEEccCCCCccccH-hhcCCCCCCEEECCCCCCcCh-H-HhccCCCCCEEEeeCcc
Confidence 99999999998888899999999999999998434455 688999999999999999874 3 78899999999999999
Q ss_pred eee
Q 047196 536 FSG 538 (827)
Q Consensus 536 l~g 538 (827)
|.+
T Consensus 193 i~~ 195 (197)
T 4ezg_A 193 IGG 195 (197)
T ss_dssp ---
T ss_pred cCC
Confidence 864
No 360
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.71 E-value=3.5e-18 Score=197.61 Aligned_cols=138 Identities=17% Similarity=0.098 Sum_probs=96.9
Q ss_pred EecCCceEEEEEEe-cCCcEEEEEEEcccc----------hHHHHHHHHHHHHHHhc-CCCCceEEEeeeecCCceeeee
Q 047196 683 IGVGSFGSVYKGRL-HDGIEVAIKVFHQNC----------AMALKSFEAECEVMKNI-RHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 683 iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~----------~~~~~~~~~Ei~~l~~l-~H~niv~~~~~~~~~~~~~l~~ 750 (827)
.+.|+.|.++.++. -.|+.||||++.... ....++|.+|+++|+++ .|+||+++++++.++...++..
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 56677777666653 358999999996431 22356799999999999 6999999999998887665543
Q ss_pred eccCC----------CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee----------eecccccccCCCcc
Q 047196 751 LHSTN----------CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF----------DFGIGRLLTGDRSM 810 (827)
Q Consensus 751 l~~~~----------~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl----------DFGla~~~~~~~~~ 810 (827)
.+..+ +.++ ..+|+.||+.||+|+| +++||||||||+||| |||+|+....+...
T Consensus 322 Eyv~G~~L~d~i~~~~~l~---~~~I~~QIl~AL~ylH---~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~ 395 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGEEID---REKILGSLLRSLAALE---KQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSW 395 (569)
T ss_dssp ECCCSEEHHHHHHTTCCCC---HHHHHHHHHHHHHHHH---HTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CC
T ss_pred ecCCCCcHHHHHHhCCCCC---HHHHHHHHHHHHHHHH---HCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCcc
Confidence 33322 2233 3469999999999995 678999999999998 99999987654332
Q ss_pred ccccceecccccccccC
Q 047196 811 IQTETLVTIGYMAPGLL 827 (827)
Q Consensus 811 ~~~~~~gt~~Y~APE~l 827 (827)
....+||++|||||++
T Consensus 396 -~~t~vGTp~YmAPE~l 411 (569)
T 4azs_A 396 -PTNLVQSFFVFVNELF 411 (569)
T ss_dssp -SHHHHHHHHHHHHHHC
T ss_pred -ccCceechhhccHHHh
Confidence 2335699999999974
No 361
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.71 E-value=1.6e-17 Score=182.73 Aligned_cols=145 Identities=19% Similarity=0.337 Sum_probs=112.3
Q ss_pred hcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC-----------CCCceEEEeeeec
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR-----------HRNHVKRISSCSN 742 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~-----------H~niv~~~~~~~~ 742 (827)
++|...+.||+|+||.||+|+. .+|+.||||++... ....+.+.+|++++++++ |+||+++++++..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~ 97 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD-KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH 97 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCC-ccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhc
Confidence 5788899999999999999986 56899999999754 334567889999999887 8899999998865
Q ss_pred CC----ceeeeeecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCC-CeEEccCCCccee----------
Q 047196 743 ED----FKALDCLHS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHST-PVIHCDLKPKNVF---------- 796 (827)
Q Consensus 743 ~~----~~~l~~l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~-~iiHrDlK~~NIl---------- 796 (827)
.. ..++...+. ....+++.....++.+++.||+|||. + +|+||||||+||+
T Consensus 98 ~~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~---~~~ivH~Dikp~NIll~~~~~~~~~ 174 (373)
T 1q8y_A 98 KGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHR---RCGIIHTDIKPENVLMEIVDSPENL 174 (373)
T ss_dssp EETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHH---TTCEECSCCSGGGEEEEEEETTTTE
T ss_pred cCCCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChHHeEEeccCCCcCc
Confidence 32 222211111 12347788888999999999999974 4 8999999999987
Q ss_pred ------eecccccccCCCccccccceecccccccccC
Q 047196 797 ------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+|+...... ....||++|+|||++
T Consensus 175 ~~~kl~Dfg~a~~~~~~~----~~~~~t~~y~aPE~~ 207 (373)
T 1q8y_A 175 IQIKIADLGNACWYDEHY----TNSIQTREYRSPEVL 207 (373)
T ss_dssp EEEEECCCTTCEETTBCC----CSCCSCGGGCCHHHH
T ss_pred ceEEEcccccccccCCCC----CCCCCCccccCcHHH
Confidence 899887664321 234589999999963
No 362
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.71 E-value=1.9e-17 Score=187.48 Aligned_cols=149 Identities=23% Similarity=0.364 Sum_probs=111.2
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEee-eecCCceee--e
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISS-CSNEDFKAL--D 749 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~-~~~~~~~~l--~ 749 (827)
.++|...++||+|+||.||+|+. .+|+.||||++..... .+++.+|+++++.++|++.+..+.+ +...+..++ +
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~--~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme 83 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK--HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMD 83 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS--SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc--cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEE
Confidence 35789999999999999999986 5689999998764432 2357899999999998665554444 444443333 3
Q ss_pred eecc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccccccCCC
Q 047196 750 CLHS--------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGRLLTGDR 808 (827)
Q Consensus 750 ~l~~--------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~~~~~~~ 808 (827)
++.. ....+++.....|+.+++.||+||| +.+|+||||||+||| |||+|+.+....
T Consensus 84 ~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH---~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~ 160 (483)
T 3sv0_A 84 LLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVH---SKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTS 160 (483)
T ss_dssp CCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTT
T ss_pred CCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH---HCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCc
Confidence 3311 1345788889999999999999996 568999999999998 999998775433
Q ss_pred ccc------cccceecccccccccC
Q 047196 809 SMI------QTETLVTIGYMAPGLL 827 (827)
Q Consensus 809 ~~~------~~~~~gt~~Y~APE~l 827 (827)
... .....||+.|+|||++
T Consensus 161 ~~~~~~~~~~~~~~gt~~Y~aPE~~ 185 (483)
T 3sv0_A 161 THQHIPYRENKNLTGTARYASVNTH 185 (483)
T ss_dssp TCCBCCCCCCCCCCSCTTTCCHHHH
T ss_pred cccccccccccccCCCccccCHHHh
Confidence 211 1234589999999963
No 363
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.70 E-value=9.7e-18 Score=174.96 Aligned_cols=168 Identities=17% Similarity=0.246 Sum_probs=112.0
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
.+..+++++|.+++.. .+..+++|+.|++++|.++. +| .+..+++|+.|+|++|++++..| +..+++|+.|+++
T Consensus 20 ~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~ 93 (263)
T 1xeu_A 20 NAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSVN 93 (263)
T ss_dssp HHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEECC
T ss_pred HHHHHHhcCCCccccc--chhhcCcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEECC
Confidence 4556667777776433 45667777777777777764 34 56677777777777777775443 6777777777777
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccceeeecc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRNNFSGDI 540 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~i 540 (827)
+|++++ +|.... ++|++|++++|.+++. +.+..+++|+.||+++|++++. + .++.++.|+.|++++|++++.
T Consensus 94 ~N~l~~-l~~~~~--~~L~~L~L~~N~l~~~--~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~- 165 (263)
T 1xeu_A 94 RNRLKN-LNGIPS--ACLSRLFLDNNELRDT--DSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT- 165 (263)
T ss_dssp SSCCSC-CTTCCC--SSCCEEECCSSCCSBS--GGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-
T ss_pred CCccCC-cCcccc--CcccEEEccCCccCCC--hhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch-
Confidence 777764 343222 6777777777777663 2466677777777777777664 2 466677777777777777765
Q ss_pred cccccCCCCCCEEECCCCcceee
Q 047196 541 PSTIGDLKDLQNISLACNGLEGL 563 (827)
Q Consensus 541 p~~~~~l~~L~~L~Ls~N~l~g~ 563 (827)
..+..+++|+.|++++|.+++.
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEECC
T ss_pred -HHhccCCCCCEEeCCCCcccCC
Confidence 5566777777777777776654
No 364
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.70 E-value=3.6e-17 Score=177.26 Aligned_cols=145 Identities=19% Similarity=0.328 Sum_probs=111.9
Q ss_pred hcccccceEecCCceEEEEEEe--cCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCC------ceEEEeeeecCCce
Q 047196 675 EKFSKENLIGVGSFGSVYKGRL--HDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRN------HVKRISSCSNEDFK 746 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~--~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~n------iv~~~~~~~~~~~~ 746 (827)
++|+..+.||+|+||.||+|.. .+|+.||||++... ....+.+.+|+++++.++|++ ++++++++...+..
T Consensus 14 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~ 92 (339)
T 1z57_A 14 ARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNV-DRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHI 92 (339)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSS-HHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEE
T ss_pred CceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecC-CchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcE
Confidence 5788899999999999999986 36889999999654 334567899999999998765 89999998877655
Q ss_pred eeeeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------------
Q 047196 747 ALDCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------------- 796 (827)
Q Consensus 747 ~l~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------------- 796 (827)
++...+.. ...+++.....++.++++||+||| +.+|+||||||+||+
T Consensus 93 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH---~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~ 169 (339)
T 1z57_A 93 CIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLH---SNKLTHTDLKPENILFVQSDYTEAYNPKIKRDER 169 (339)
T ss_dssp EEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---HTTEECCCCCGGGEEESCCCEEEEEC----CEEE
T ss_pred EEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEEEeccccccccCCccccccc
Confidence 44322211 124667788899999999999996 568999999999986
Q ss_pred ----------eecccccccCCCccccccceecccccccccC
Q 047196 797 ----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ----------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++..... .....||++|+|||++
T Consensus 170 ~~~~~~~kl~Dfg~~~~~~~~----~~~~~gt~~y~aPE~~ 206 (339)
T 1z57_A 170 TLINPDIKVVDFGSATYDDEH----HSTLVSTRHYRAPEVI 206 (339)
T ss_dssp EESCCCEEECCCSSCEETTSC----CCSSCSCGGGCCHHHH
T ss_pred cccCCCceEeeCcccccCccc----cccccCCccccChHHh
Confidence 67777654322 1234589999999963
No 365
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.70 E-value=1.7e-17 Score=164.49 Aligned_cols=130 Identities=25% Similarity=0.339 Sum_probs=74.0
Q ss_pred cEEEccCCcCccccCccccCCCCCceEeccCccccccccc-cccCCCCCcEEECCCCCCCCCCCccccccccccEEecCC
Q 047196 383 ENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPV-TFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAG 461 (827)
Q Consensus 383 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~-~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 461 (827)
+.+++++|+++ .+|..+. .+|+.|++++|++++..+. .|..+++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~--~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIP--LHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCC--CCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 55666666664 4444332 2566666666666554443 355566666666666666655555565666666666666
Q ss_pred CcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCC
Q 047196 462 NKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGP 515 (827)
Q Consensus 462 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~ 515 (827)
|++++..|..|.++++|++|+|++|++++..|..+..+++|++|+|++|.+++.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 666555555555555555555555555555555555555555555555555543
No 366
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.69 E-value=6.4e-17 Score=176.53 Aligned_cols=145 Identities=23% Similarity=0.343 Sum_probs=112.2
Q ss_pred hcccccceEecCCceEEEEEEec-CC-cEEEEEEEcccchHHHHHHHHHHHHHHhcCCCC------ceEEEeeeecCCce
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DG-IEVAIKVFHQNCAMALKSFEAECEVMKNIRHRN------HVKRISSCSNEDFK 746 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g-~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~n------iv~~~~~~~~~~~~ 746 (827)
++|...+.||+|+||.||+|+.. ++ +.||||++... ....+.+.+|++++++++|++ ++.+.+++......
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 97 (355)
T 2eu9_A 19 ERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNV-GKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHM 97 (355)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSC-HHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEE
T ss_pred ccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEccc-ccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeE
Confidence 57888999999999999999864 44 78999999654 334567889999999998877 88888888776654
Q ss_pred eeeeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------------
Q 047196 747 ALDCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF------------------- 796 (827)
Q Consensus 747 ~l~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl------------------- 796 (827)
++...+.. ...+++.+...++.++++||+||| +.+|+||||||+||+
T Consensus 98 ~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH---~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~ 174 (355)
T 2eu9_A 98 CIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLH---ENQLTHTDLKPENILFVNSEFETLYNEHKSCEEK 174 (355)
T ss_dssp EEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH---TTTEECCCCCGGGEEESCCCEEEEECCC-CCCEE
T ss_pred EEEEeccCCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---HCCcccCCCCHHHEEEeccccccccccccccccc
Confidence 44222211 134778888999999999999996 678999999999985
Q ss_pred ----------eecccccccCCCccccccceecccccccccC
Q 047196 797 ----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 797 ----------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
|||+++...... ....||+.|+|||++
T Consensus 175 ~~~~~~~kl~Dfg~~~~~~~~~----~~~~gt~~y~aPE~~ 211 (355)
T 2eu9_A 175 SVKNTSIRVADFGSATFDHEHH----TTIVATRHYRPPEVI 211 (355)
T ss_dssp EESCCCEEECCCTTCEETTSCC----CSSCSCGGGCCHHHH
T ss_pred ccCCCcEEEeecCccccccccc----cCCcCCCcccCCeee
Confidence 788876543221 234589999999963
No 367
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.69 E-value=3.1e-18 Score=184.15 Aligned_cols=149 Identities=30% Similarity=0.433 Sum_probs=111.2
Q ss_pred HhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
..++|+..+.||+|+||.||+|+..+ .||||++.... ....+.|.+|++++++++|+||+++++++...+..++..
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~ 108 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIIT 108 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEEC
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEe
Confidence 34678889999999999999998754 49999986432 223456789999999999999999999998876544422
Q ss_pred ecc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------eecccccccCCCc-
Q 047196 751 LHS-----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------DFGIGRLLTGDRS- 809 (827)
Q Consensus 751 l~~-----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------DFGla~~~~~~~~- 809 (827)
.+. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++.......
T Consensus 109 e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH---~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~ 185 (319)
T 2y4i_B 109 SLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAG 185 (319)
T ss_dssp BCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH---HTTCCCCCCCSTTEEEC--CCEECCCSCCC--------
T ss_pred ecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH---hCCccccCCChhhEEEeCCCEEEeecCCcccccccccc
Confidence 221 1234677888999999999999996 568999999999998 9999876532111
Q ss_pred ---cccccceeccccccccc
Q 047196 810 ---MIQTETLVTIGYMAPGL 826 (827)
Q Consensus 810 ---~~~~~~~gt~~Y~APE~ 826 (827)
.......||++|+|||+
T Consensus 186 ~~~~~~~~~~g~~~y~aPE~ 205 (319)
T 2y4i_B 186 RREDKLRIQNGWLCHLAPEI 205 (319)
T ss_dssp --CCSCBCCSGGGGTSCHHH
T ss_pred ccccccccCCCcccccChHH
Confidence 11122348999999996
No 368
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.69 E-value=1.3e-17 Score=193.19 Aligned_cols=149 Identities=31% Similarity=0.460 Sum_probs=113.6
Q ss_pred hhcccccceEecCCceEEEEEEe-cCCcEEEEEEEccc-chHHHHHHHHHHHHHHhcCCCCceEEEeeeec------CCc
Q 047196 674 TEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQN-CAMALKSFEAECEVMKNIRHRNHVKRISSCSN------EDF 745 (827)
Q Consensus 674 ~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~-~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~------~~~ 745 (827)
.++|...+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++|||||++++++.. .+.
T Consensus 13 ~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~ 92 (676)
T 3qa8_A 13 CGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDL 92 (676)
T ss_dssp ----CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSS
T ss_pred CCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCe
Confidence 36799999999999999999986 46899999998654 34456789999999999999999999998754 222
Q ss_pred --eeeeeeccC-----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eec
Q 047196 746 --KALDCLHST-----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFG 799 (827)
Q Consensus 746 --~~l~~l~~~-----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFG 799 (827)
.+++++... ...+++.....++.+++.|++||| +.+|+||||||+||+ |||
T Consensus 93 ~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLH---s~gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 93 PLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLH---ENRIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHH---HTTBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHH---HCCCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 233333211 124667778899999999999996 468999999999997 899
Q ss_pred ccccccCCCccccccceecccccccccC
Q 047196 800 IGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 800 la~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
+++....... .....||++|+|||++
T Consensus 170 ~a~~~~~~~~--~~~~~gt~~Y~APE~l 195 (676)
T 3qa8_A 170 YAKELDQGEL--CTEFVGTLQYLAPELL 195 (676)
T ss_dssp CCCBTTSCCC--CCCCCSCCTTCSSCSS
T ss_pred cccccccccc--cccccCCcccCChHHh
Confidence 9987654332 2334689999999974
No 369
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.69 E-value=7.5e-17 Score=174.83 Aligned_cols=144 Identities=23% Similarity=0.383 Sum_probs=92.5
Q ss_pred hhccccc-ceEecCCceEEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceEEEeeeec----CC--c
Q 047196 674 TEKFSKE-NLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVKRISSCSN----ED--F 745 (827)
Q Consensus 674 ~~~~~~~-~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~----~~--~ 745 (827)
.++|... ++||+|+||.||+|+.. +|+.||||++..... .. ......++.++|||++++++++.. .. +
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~---~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 102 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK-AR---QEVDHHWQASGGPHIVCILDVYENMHHGKRCLL 102 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH-HH---HHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH-HH---HHHHHHHHhcCCCChHHHHHHHhhccCCCceEE
Confidence 4567774 57999999999999875 689999999865321 11 222334677799999999999865 22 2
Q ss_pred eeeeeecc----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccc
Q 047196 746 KALDCLHS----------TNCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGR 802 (827)
Q Consensus 746 ~~l~~l~~----------~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~ 802 (827)
.+++++.. ....+++.+...++.++++||+||| +.+|+||||||+||+ |||+++
T Consensus 103 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH---~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~ 179 (336)
T 3fhr_A 103 IIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK 179 (336)
T ss_dssp EEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHH---HTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred EEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH---hCCeecCCCCHHHEEEEecCCCceEEEeccccce
Confidence 22333322 1125788889999999999999996 568999999999998 899887
Q ss_pred cccCCCccccccceecccccccccC
Q 047196 803 LLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 803 ~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
...... .....||++|+|||++
T Consensus 180 ~~~~~~---~~~~~~t~~y~aPE~~ 201 (336)
T 3fhr_A 180 ETTQNA---LQTPCYTPYYVAPEVL 201 (336)
T ss_dssp EC-----------------------
T ss_pred eccccc---cccCCCCcCccChhhh
Confidence 654322 1234589999999974
No 370
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.69 E-value=6.6e-17 Score=160.17 Aligned_cols=113 Identities=23% Similarity=0.272 Sum_probs=58.5
Q ss_pred cccEEecCCCcccccCCc-cccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEc
Q 047196 453 RLNTLGLAGNKFSGSIPS-CLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINL 531 (827)
Q Consensus 453 ~L~~L~Ls~N~l~~~~p~-~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L 531 (827)
+|++|++++|++++..+. .+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..++.++.|+.|+|
T Consensus 30 ~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 109 (192)
T 1w8a_A 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNL 109 (192)
T ss_dssp TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSCCCCEECSSSSTTCTTCCEEEC
T ss_pred CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCCcCCccCHHHhcCCCCCCEEEC
Confidence 344444444444433332 2444444455555555554444444445555555555555555444444555555555555
Q ss_pred ccceeeecccccccCCCCCCEEECCCCcceeecC
Q 047196 532 SRNNFSGDIPSTIGDLKDLQNISLACNGLEGLIP 565 (827)
Q Consensus 532 s~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip 565 (827)
++|+|++.+|..+..+++|+.|+|++|.+++..+
T Consensus 110 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 143 (192)
T 1w8a_A 110 YDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143 (192)
T ss_dssp CSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGG
T ss_pred CCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCc
Confidence 5555555556566666666666666666655443
No 371
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.68 E-value=1.4e-17 Score=185.91 Aligned_cols=147 Identities=16% Similarity=0.169 Sum_probs=99.8
Q ss_pred HhhcccccceEecCCceEEEEEEe-cCCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCC-CCce---------EEEe
Q 047196 673 ATEKFSKENLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRH-RNHV---------KRIS 738 (827)
Q Consensus 673 ~~~~~~~~~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H-~niv---------~~~~ 738 (827)
.++.|...++||+|+||.||+|++ .+|+.||||++.... ....+.|.+|+.+++.++| +|.. ....
T Consensus 76 ~~~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~ 155 (413)
T 3dzo_A 76 RPRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD 155 (413)
T ss_dssp CCEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCE
T ss_pred CceeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchh
Confidence 345677889999999999999995 579999999987332 2235789999999999988 2211 1000
Q ss_pred e------------eecCC------ce-eeeeec--------------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCe
Q 047196 739 S------------CSNED------FK-ALDCLH--------------STNCSLNIFDKLNIMIDVASALEYLHFSHSTPV 785 (827)
Q Consensus 739 ~------------~~~~~------~~-~l~~l~--------------~~~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~i 785 (827)
. ..... .. ++.... .....+.+..+..|+.|+++||+||| +++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH---~~~i 232 (413)
T 3dzo_A 156 LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLH---HYGL 232 (413)
T ss_dssp EEECCC---------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH---HTTE
T ss_pred hcccCCCCccccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHH---hCCc
Confidence 1 01100 00 000000 01122455677889999999999996 5689
Q ss_pred EEccCCCccee----------eecccccccCCCccccccceecccccccccC
Q 047196 786 IHCDLKPKNVF----------DFGIGRLLTGDRSMIQTETLVTIGYMAPGLL 827 (827)
Q Consensus 786 iHrDlK~~NIl----------DFGla~~~~~~~~~~~~~~~gt~~Y~APE~l 827 (827)
+||||||+||| |||+++..... ....+| ++|||||++
T Consensus 233 iHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~----~~~~~g-~~y~aPE~~ 279 (413)
T 3dzo_A 233 VHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS----AVSPIG-RGFAPPETT 279 (413)
T ss_dssp ECSCCCGGGEEECTTCCEEECCGGGCEETTEE----ECCCCC-TTTCCHHHH
T ss_pred ccCCcccceEEEecCCeEEEEeccceeecCCc----cccCCC-CceeCchhh
Confidence 99999999998 99998865432 233457 999999974
No 372
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.67 E-value=1.1e-17 Score=192.27 Aligned_cols=144 Identities=19% Similarity=0.203 Sum_probs=95.1
Q ss_pred cccceEecCCceEEEEEEecCCcEEEEEEEcccc--------hHHHHHHHHHHHHHHhcCCCCceEEEeeeecC--Ccee
Q 047196 678 SKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNC--------AMALKSFEAECEVMKNIRHRNHVKRISSCSNE--DFKA 747 (827)
Q Consensus 678 ~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~--------~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~--~~~~ 747 (827)
...++||+|+||.||+|+. .++.+|+|+..... ....++|.+|++++++++|||||++..++... .+..
T Consensus 339 ~~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lV 417 (540)
T 3en9_A 339 IPEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIM 417 (540)
T ss_dssp ---------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEE
T ss_pred CCCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEE
Confidence 4467899999999999954 46889999864321 11245689999999999999999444444343 3344
Q ss_pred eeeeccCCCCCCHH--HHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee--------eecccccccCCCccc------
Q 047196 748 LDCLHSTNCSLNIF--DKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF--------DFGIGRLLTGDRSMI------ 811 (827)
Q Consensus 748 l~~l~~~~~~l~~~--~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl--------DFGla~~~~~~~~~~------ 811 (827)
++++.. +.+... .+..++.|+++||+||| +++|+||||||+||| |||+|+.........
T Consensus 418 mE~~~g--gsL~~~l~~~~~i~~qi~~aL~~LH---~~gIiHrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~ 492 (540)
T 3en9_A 418 MSYING--KLAKDVIEDNLDIAYKIGEIVGKLH---KNDVIHNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVF 492 (540)
T ss_dssp EECCCS--EEHHHHSTTCTHHHHHHHHHHHHHH---HTTEECTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHH
T ss_pred EECCCC--CCHHHHHHHHHHHHHHHHHHHHHHH---HCcCccCCCCHHHEEECCeEEEEECccCEECCCccccccchhhh
Confidence 444432 221111 14589999999999996 568999999999997 999999875432211
Q ss_pred cccceecccccccccC
Q 047196 812 QTETLVTIGYMAPGLL 827 (827)
Q Consensus 812 ~~~~~gt~~Y~APE~l 827 (827)
....+||+.|||||++
T Consensus 493 ~~~~~GT~~y~APEv~ 508 (540)
T 3en9_A 493 KKAVLSTHHEKFDEIW 508 (540)
T ss_dssp HHHHHHHCGGGHHHHH
T ss_pred hhhhcCCCCcCCHHHH
Confidence 1234599999999974
No 373
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.66 E-value=5.2e-17 Score=175.55 Aligned_cols=134 Identities=15% Similarity=0.106 Sum_probs=67.0
Q ss_pred CCCCCCEEECCCCCCCccCChhhhh-ccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhcccccc
Q 047196 120 NLSSLTTLNLSHNKLSGDIPPSIFT-MHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLK 198 (827)
Q Consensus 120 ~L~~L~~L~Ls~N~l~g~~p~~~~~-l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~ 198 (827)
.+.+++.|+++++ +....-..+.. +++|++|||++|++..... ..+.+..+..+.+..| .||..
T Consensus 23 ~~~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~-~~~~~~~~~~~~~~~~----~I~~~--------- 87 (329)
T 3sb4_A 23 EANSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSG-KAGTYPNGKFYIYMAN----FVPAY--------- 87 (329)
T ss_dssp HHHHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEE-SSSSSGGGCCEEECTT----EECTT---------
T ss_pred hhCceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecC-cccccccccccccccc----ccCHH---------
Confidence 3678888888864 22222234444 6779999999998871100 0000000111111111 12211
Q ss_pred EEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeec
Q 047196 199 VLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGF 276 (827)
Q Consensus 199 ~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 276 (827)
.|.+..|..+.++++|+.++|.. .++..-+..|.++++|+.|++++|.+....+..|..+.++..+.+..
T Consensus 88 -------aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~ 157 (329)
T 3sb4_A 88 -------AFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGS 157 (329)
T ss_dssp -------TTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTC
T ss_pred -------HhcccccccccccCCCcEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcc
Confidence 12222222222366666666666 56555555566666666666666666555555565555555544443
No 374
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.64 E-value=6.9e-16 Score=163.08 Aligned_cols=119 Identities=11% Similarity=0.003 Sum_probs=96.1
Q ss_pred hcccccceEecCCceEEEEEEec-CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCCCCceEEEeeeecCCceeeee
Q 047196 675 EKFSKENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRHRNHVKRISSCSNEDFKALDC 750 (827)
Q Consensus 675 ~~~~~~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H~niv~~~~~~~~~~~~~l~~ 750 (827)
++|...+.||+|+||.||+|+.. +|+.||||++.... ....++|.+|++++++++|||||++++++...+..++..
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888999999999999999875 58999999996542 344578999999999999999999999998876554432
Q ss_pred eccC--------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee
Q 047196 751 LHST--------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF 796 (827)
Q Consensus 751 l~~~--------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl 796 (827)
.+.. .......+...|+.++++||+||| +.+|+||||||+||+
T Consensus 111 e~~~g~~L~~~l~~~~~~~~~~~i~~ql~~aL~~lH---~~givH~Dikp~NIl 161 (286)
T 3uqc_A 111 EWIRGGSLQEVADTSPSPVGAIRAMQSLAAAADAAH---RAGVALSIDHPSRVR 161 (286)
T ss_dssp ECCCEEEHHHHHTTCCCHHHHHHHHHHHHHHHHHHH---HTTCCCCCCSGGGEE
T ss_pred EecCCCCHHHHHhcCCChHHHHHHHHHHHHHHHHHH---HCCCccCCCCcccEE
Confidence 2221 112345567889999999999996 568999999999998
No 375
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=5e-16 Score=150.22 Aligned_cols=133 Identities=20% Similarity=0.153 Sum_probs=78.4
Q ss_pred CCCcEEECCCCCCC-CCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccC
Q 047196 428 QKLQGLYLPFNKLA-GSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFD 506 (827)
Q Consensus 428 ~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~Ld 506 (827)
++|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|++|++++|.+++.+|..+..+++|+.|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 44555555555554 45555555555555555555555543 4455556666666666666555555555566666666
Q ss_pred CCCCCCCCCC-cccccccccCceEEcccceeeeccc---ccccCCCCCCEEECCCCccee
Q 047196 507 LSSNSLDGPL-SLDIGNLRVVIGINLSRNNFSGDIP---STIGDLKDLQNISLACNGLEG 562 (827)
Q Consensus 507 Ls~N~l~g~~-p~~~~~l~~L~~L~Ls~N~l~g~ip---~~~~~l~~L~~L~Ls~N~l~g 562 (827)
+++|.+++.. +..+..++.|+.|++++|++++..+ ..+..+++|+.|++++|.+..
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~ 161 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQE 161 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCB
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChhh
Confidence 6666665532 2456666666777777777665444 366677777777777766643
No 376
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.62 E-value=4.3e-16 Score=168.30 Aligned_cols=101 Identities=22% Similarity=0.193 Sum_probs=58.7
Q ss_pred CCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCcccccccccc-EEecCCCcccccCCccccCCCCCCcc
Q 047196 403 LSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLN-TLGLAGNKFSGSIPSCLGNLTSLRSP 481 (827)
Q Consensus 403 l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~-~L~Ls~N~l~~~~p~~~~~l~~L~~L 481 (827)
+++|+.++|++|+++...+..|.++++|+.|+|++| +...-+..|.++++|+ .+++.+ +++..-+..|.+|++|+.+
T Consensus 225 ~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l 302 (329)
T 3sb4_A 225 MPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYV 302 (329)
T ss_dssp CTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEE
T ss_pred cCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEE
Confidence 566666666666666555555666666666666665 4433344555666666 666655 4444444555566666666
Q ss_pred ccCCCcccccCCcccccccccccc
Q 047196 482 DLGSNRLTSVLPSTFWNLKDILFF 505 (827)
Q Consensus 482 ~Ls~N~l~~~~p~~~~~l~~L~~L 505 (827)
++++|+++...+..|.++++|+.+
T Consensus 303 ~l~~n~i~~I~~~aF~~~~~L~~l 326 (329)
T 3sb4_A 303 LATGDKITTLGDELFGNGVPSKLI 326 (329)
T ss_dssp EECSSCCCEECTTTTCTTCCCCEE
T ss_pred EeCCCccCccchhhhcCCcchhhh
Confidence 665566655555555555555544
No 377
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.62 E-value=1.4e-15 Score=147.17 Aligned_cols=134 Identities=20% Similarity=0.174 Sum_probs=75.9
Q ss_pred CCCCCEEECCCCCCC-ccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhccccccE
Q 047196 121 LSSLTTLNLSHNKLS-GDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYLHYLKV 199 (827)
Q Consensus 121 L~~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~ 199 (827)
.++|++|+|++|.++ +.+|..+..+++|++|+|++|.+++. ..+..+++|++|++++|.+++.+|..+.. +++|++
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~ 99 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEK-LPNLTH 99 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHH-CTTCCE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhh-CCCCCE
Confidence 367788888888887 67777778888888888888887755 44555555555555555555443333222 224445
Q ss_pred EEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEccccccccccc---ccccCcCCCcEEEeec
Q 047196 200 LFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIP---HEIGYLPNLENLVLGF 276 (827)
Q Consensus 200 L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~L~Ls~ 276 (827)
|++++|.+++.. .+..+..+++|++|++++|.+++..+ ..+..+++|++|+++.
T Consensus 100 L~Ls~N~l~~~~-----------------------~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~ 156 (168)
T 2ell_A 100 LNLSGNKLKDIS-----------------------TLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYD 156 (168)
T ss_dssp EECBSSSCCSSG-----------------------GGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEE
T ss_pred EeccCCccCcch-----------------------hHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCC
Confidence 554444444321 11344455555555555555553332 2455555555555555
Q ss_pred ccCc
Q 047196 277 NNLV 280 (827)
Q Consensus 277 N~l~ 280 (827)
|.+.
T Consensus 157 n~~~ 160 (168)
T 2ell_A 157 REDQ 160 (168)
T ss_dssp TTSC
T ss_pred CChh
Confidence 5544
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=4.8e-16 Score=147.12 Aligned_cols=126 Identities=24% Similarity=0.306 Sum_probs=96.7
Q ss_pred cccEEEccCCcCc-cccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEec
Q 047196 381 SLENIYISNCNIG-GSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGL 459 (827)
Q Consensus 381 ~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~L 459 (827)
+++.|++++|+++ +.+|..+..+++|+.|++++|++++. ..++.+++|++|++++|++++.+|..+..+++|++|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 6888888888887 77787778888888888888888765 66777888888888888888777777777788888888
Q ss_pred CCCccccc-CCccccCCCCCCccccCCCcccccCC---ccccccccccccCCC
Q 047196 460 AGNKFSGS-IPSCLGNLTSLRSPDLGSNRLTSVLP---STFWNLKDILFFDLS 508 (827)
Q Consensus 460 s~N~l~~~-~p~~~~~l~~L~~L~Ls~N~l~~~~p---~~~~~l~~L~~LdLs 508 (827)
++|++++. .|..+..+++|++|++++|.+++..+ ..+..+++|+.||++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 88888753 34667777788888888887777655 456677777777765
No 379
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.61 E-value=3.7e-16 Score=147.91 Aligned_cols=126 Identities=15% Similarity=0.152 Sum_probs=64.3
Q ss_pred CCcEEECCCCCCC-CCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCC
Q 047196 429 KLQGLYLPFNKLA-GSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDL 507 (827)
Q Consensus 429 ~L~~L~Ls~N~l~-g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL 507 (827)
+|+.|++++|.++ +.+|..+..+++|++|++++|++++. ..+..+++|++|++++|.+++.+|..+..+++|+.|++
T Consensus 18 ~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 95 (149)
T 2je0_A 18 DVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNL 95 (149)
T ss_dssp GCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEEC
T ss_pred cCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEEC
Confidence 3344444444443 33444444444444444444444432 33444455555555555555444444444555555555
Q ss_pred CCCCCCCC-CcccccccccCceEEcccceeeeccc---ccccCCCCCCEEECC
Q 047196 508 SSNSLDGP-LSLDIGNLRVVIGINLSRNNFSGDIP---STIGDLKDLQNISLA 556 (827)
Q Consensus 508 s~N~l~g~-~p~~~~~l~~L~~L~Ls~N~l~g~ip---~~~~~l~~L~~L~Ls 556 (827)
++|.+++. .+..++.++.|+.|++++|++++..+ ..++.+++|+.||++
T Consensus 96 s~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 96 SGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp TTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred CCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 55555542 23455566666666666666665544 456666666666665
No 380
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.59 E-value=2.5e-15 Score=158.09 Aligned_cols=127 Identities=13% Similarity=0.166 Sum_probs=89.6
Q ss_pred HHHhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccch------------------HHHHHHHHHHHHHHhcCCCC
Q 047196 671 FRATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCA------------------MALKSFEAECEVMKNIRHRN 732 (827)
Q Consensus 671 ~~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~------------------~~~~~~~~Ei~~l~~l~H~n 732 (827)
......|...+.||+|+||.||+|+..+|+.||||+++.... .....+.+|++++++++|.+
T Consensus 86 ~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~~~ 165 (282)
T 1zar_A 86 VRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLA 165 (282)
T ss_dssp HHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSS
T ss_pred HhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccCCC
Confidence 334445667799999999999999987799999999864321 23467899999999999544
Q ss_pred ceEEEeeeec-CCceeeeeeccCC-CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee---------eeccc
Q 047196 733 HVKRISSCSN-EDFKALDCLHSTN-CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF---------DFGIG 801 (827)
Q Consensus 733 iv~~~~~~~~-~~~~~l~~l~~~~-~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl---------DFGla 801 (827)
+. +++.. ..+..++++.... ..+...+...++.++++|++||| +.+|+||||||+||| |||+|
T Consensus 166 v~---~~~~~~~~~lvmE~~~g~~L~~l~~~~~~~i~~qi~~~l~~lH---~~giiHrDlkp~NILl~~~~vkl~DFG~a 239 (282)
T 1zar_A 166 VP---KVYAWEGNAVLMELIDAKELYRVRVENPDEVLDMILEEVAKFY---HRGIVHGDLSQYNVLVSEEGIWIIDFPQS 239 (282)
T ss_dssp SC---CEEEEETTEEEEECCCCEEGGGCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEEEETTEEEECCCTTC
T ss_pred cC---eEEeccceEEEEEecCCCcHHHcchhhHHHHHHHHHHHHHHHH---HCCCEeCCCCHHHEEEECCcEEEEECCCC
Confidence 44 43322 2333444443211 11222345679999999999996 678999999999998 77776
Q ss_pred cc
Q 047196 802 RL 803 (827)
Q Consensus 802 ~~ 803 (827)
+.
T Consensus 240 ~~ 241 (282)
T 1zar_A 240 VE 241 (282)
T ss_dssp EE
T ss_pred eE
Confidence 53
No 381
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.59 E-value=4.5e-15 Score=146.95 Aligned_cols=108 Identities=27% Similarity=0.362 Sum_probs=56.7
Q ss_pred cccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcc
Q 047196 453 RLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLS 532 (827)
Q Consensus 453 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls 532 (827)
+|+.|++++|+++ .+|..+.++++|++|+|++|.+++..|..|.++++|+.|+|++|++++..|..+..+++|+.|+|+
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4444455555444 344444455555555555555554444445555555555555555555444455555555555555
Q ss_pred cceeeecccccccCCCCCCEEECCCCcce
Q 047196 533 RNNFSGDIPSTIGDLKDLQNISLACNGLE 561 (827)
Q Consensus 533 ~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~ 561 (827)
+|+|++..+..|..+++|+.|+|++|.+.
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~ 139 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLY 139 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEE
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCee
Confidence 55555444445555666666666655554
No 382
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=5.2e-15 Score=144.40 Aligned_cols=132 Identities=27% Similarity=0.268 Sum_probs=82.4
Q ss_pred ccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCC
Q 047196 382 LENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAG 461 (827)
Q Consensus 382 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 461 (827)
.+.+++++|+++. +|..+ .++|+.|++++|++++..+..|..+++|++|++++|++++..+..+..+++|++|++++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 4566777777663 34322 25677777777777665555666677777777777777655555566666666666666
Q ss_pred CcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCC
Q 047196 462 NKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPL 516 (827)
Q Consensus 462 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~ 516 (827)
|++++..+..+..+++|++|++++|.+++..+..+..+++|+.|++++|.+++..
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~ 140 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 140 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccC
Confidence 6666555555666666666666666666555544555566666666666555543
No 383
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.59 E-value=4.7e-15 Score=144.70 Aligned_cols=113 Identities=22% Similarity=0.241 Sum_probs=56.6
Q ss_pred cccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcc
Q 047196 453 RLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLS 532 (827)
Q Consensus 453 ~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls 532 (827)
+|+.|++++|++++..+..+..+++|++|++++|.+++..+..|..+++|+.|++++|++++..+..++.++.|+.|+++
T Consensus 29 ~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 108 (177)
T 2o6r_A 29 SATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALD 108 (177)
T ss_dssp TCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECc
Confidence 44444444444443333334444455555555555544444444445555555555555554444444555555555555
Q ss_pred cceeeecccccccCCCCCCEEECCCCcceeecC
Q 047196 533 RNNFSGDIPSTIGDLKDLQNISLACNGLEGLIP 565 (827)
Q Consensus 533 ~N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ip 565 (827)
+|+|++..+..+..+++|+.|+|++|.+++..|
T Consensus 109 ~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 109 TNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 555554444444555555655555555554433
No 384
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.58 E-value=7.9e-15 Score=145.16 Aligned_cols=126 Identities=24% Similarity=0.336 Sum_probs=64.0
Q ss_pred cEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCC
Q 047196 383 ENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGN 462 (827)
Q Consensus 383 ~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N 462 (827)
+.+++++|+++ .+|..+. ++|+.|+|++|+++ .+|..|.++++|+.|+|++|++++..+..|.++++|++|+|++|
T Consensus 13 ~~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 13 TVVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp TEEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45666666665 3443332 35555666655555 34455555555555555555555544445555555555555555
Q ss_pred cccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCC
Q 047196 463 KFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSL 512 (827)
Q Consensus 463 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l 512 (827)
++++..|..|..+++|++|+|++|.+++..+..|..+++|+.|+|++|.+
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~ 138 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPL 138 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCE
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCe
Confidence 55544444455555555555555555444333344444444444444433
No 385
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.52 E-value=4.7e-17 Score=162.12 Aligned_cols=137 Identities=20% Similarity=0.224 Sum_probs=69.5
Q ss_pred cCCCCCceEeccCccccccccc------cccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccC
Q 047196 401 SNLSNLLLLDLEGNKLTGSIPV------TFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGN 474 (827)
Q Consensus 401 ~~l~~L~~L~Ls~N~l~g~~p~------~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~ 474 (827)
.....++.++++.|.++|.+|. .+..+++|++|++++|.+++ +| .+..+++|++|++++|+++ .+|..+..
T Consensus 15 ~~~~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~ 91 (198)
T 1ds9_A 15 EERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAV 91 (198)
T ss_dssp HHTTCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHH
T ss_pred HhcccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhc
Confidence 3345556666666666665554 45555555555555555554 34 4555555555555555554 34444444
Q ss_pred CCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCc-ccccccccCceEEcccceeeecccc
Q 047196 475 LTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLS-LDIGNLRVVIGINLSRNNFSGDIPS 542 (827)
Q Consensus 475 l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p-~~~~~l~~L~~L~Ls~N~l~g~ip~ 542 (827)
+++|++|++++|.+++. | .+..+++|+.|++++|++++..+ ..+..++.|+.|++++|++++.+|.
T Consensus 92 ~~~L~~L~L~~N~l~~l-~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 92 ADTLEELWISYNQIASL-S-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp HHHCSEEEEEEEECCCH-H-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCcCCEEECcCCcCCcC-C-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 45555555555555442 2 34444455555555555443211 2344455555555555555544443
No 386
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.52 E-value=3.7e-14 Score=150.84 Aligned_cols=124 Identities=23% Similarity=0.427 Sum_probs=96.0
Q ss_pred hccccc-ceEecCCceEEEEEEe-cCCcEEEEEEEcccchHHHHHHHHHHHHH-HhcCCCCceEEEeeeec----CCcee
Q 047196 675 EKFSKE-NLIGVGSFGSVYKGRL-HDGIEVAIKVFHQNCAMALKSFEAECEVM-KNIRHRNHVKRISSCSN----EDFKA 747 (827)
Q Consensus 675 ~~~~~~-~~iG~G~fg~Vy~~~~-~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l-~~l~H~niv~~~~~~~~----~~~~~ 747 (827)
++|... ++||+|+||.||+|+. .+|+.||||++... ..+.+|++++ +..+||||+++++++.. ....+
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 91 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLL 91 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEE
Confidence 456665 7899999999999986 46899999998643 3467889888 66699999999998865 22222
Q ss_pred --eeeeccC----------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-------------eecccc
Q 047196 748 --LDCLHST----------NCSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF-------------DFGIGR 802 (827)
Q Consensus 748 --l~~l~~~----------~~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl-------------DFGla~ 802 (827)
+++.... ...+++.....++.+++.||+||| +.+|+||||||+||+ |||+|+
T Consensus 92 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH---~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~ 168 (299)
T 3m2w_A 92 IVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLH---SINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK 168 (299)
T ss_dssp EEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHH---HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred EEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEecCCCCCcEEEecccccc
Confidence 2332211 124778888999999999999996 568999999999998 899987
Q ss_pred cccC
Q 047196 803 LLTG 806 (827)
Q Consensus 803 ~~~~ 806 (827)
....
T Consensus 169 ~~~~ 172 (299)
T 3m2w_A 169 ETTG 172 (299)
T ss_dssp ECTT
T ss_pred cccc
Confidence 6543
No 387
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.51 E-value=1.5e-16 Score=158.48 Aligned_cols=59 Identities=32% Similarity=0.524 Sum_probs=28.5
Q ss_pred cEEEEEcCCCCCccccCc------cccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCC
Q 047196 99 RVTALNISSLNLQGTIPP------QLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLS 159 (827)
Q Consensus 99 ~v~~L~L~~~~l~g~~~~------~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~ 159 (827)
+|+.++++.+.+.|.+|. .+..+++|++|+|++|.+++ +| .+..+++|++|+|++|.++
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~ 83 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK 83 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc
Confidence 344444555555554443 44445555555555555443 33 4444555555555554443
No 388
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.50 E-value=1.9e-14 Score=140.16 Aligned_cols=132 Identities=17% Similarity=0.168 Sum_probs=84.3
Q ss_pred ccCCCCCcEEECCCCCCCCCCCccccccc-cccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccc
Q 047196 424 FGRLQKLQGLYLPFNKLAGSIPDQLCHLA-RLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDI 502 (827)
Q Consensus 424 ~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~-~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L 502 (827)
+.++.+|+.|++++|+++. +|. +..+. +|+.|++++|++++. ..+..+++|++|++++|.+++..|..+..+++|
T Consensus 15 ~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 90 (176)
T 1a9n_A 15 YTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDL 90 (176)
T ss_dssp EECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTC
T ss_pred cCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCC
Confidence 4455666666666666653 343 33333 666777777766653 456667777777777777776555555667777
Q ss_pred cccCCCCCCCCCCCcc--cccccccCceEEcccceeeeccccc----ccCCCCCCEEECCCCcce
Q 047196 503 LFFDLSSNSLDGPLSL--DIGNLRVVIGINLSRNNFSGDIPST----IGDLKDLQNISLACNGLE 561 (827)
Q Consensus 503 ~~LdLs~N~l~g~~p~--~~~~l~~L~~L~Ls~N~l~g~ip~~----~~~l~~L~~L~Ls~N~l~ 561 (827)
++|+|++|.++. +|. .++.++.|+.|++++|.++ .+|.. +..+++|+.||++.|.+.
T Consensus 91 ~~L~L~~N~i~~-~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 91 TELILTNNSLVE-LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp CEEECCSCCCCC-GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHHCTTCSEETTEECCHH
T ss_pred CEEECCCCcCCc-chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHHCCccceeCCCcCCHH
Confidence 777777777743 444 5667777777777777776 44553 677777777777776654
No 389
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.46 E-value=3.7e-14 Score=138.14 Aligned_cols=127 Identities=19% Similarity=0.196 Sum_probs=68.2
Q ss_pred cccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 381 SLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 381 ~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
+|++|++++|+++. +|......++|+.|++++|++++. ..+..+++|++|+|++|++++..|..+..+++|++|+++
T Consensus 20 ~L~~L~l~~n~l~~-i~~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~ 96 (176)
T 1a9n_A 20 RDRELDLRGYKIPV-IENLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILT 96 (176)
T ss_dssp SCEEEECTTSCCCS-CCCGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECC
T ss_pred CceEEEeeCCCCch-hHHhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECC
Confidence 56666666666663 343333233666666666666653 455566666666666666654333334556666666666
Q ss_pred CCcccccCCc--cccCCCCCCccccCCCcccccCCcc----ccccccccccCCCCCCC
Q 047196 461 GNKFSGSIPS--CLGNLTSLRSPDLGSNRLTSVLPST----FWNLKDILFFDLSSNSL 512 (827)
Q Consensus 461 ~N~l~~~~p~--~~~~l~~L~~L~Ls~N~l~~~~p~~----~~~l~~L~~LdLs~N~l 512 (827)
+|+++ .+|. .+..+++|+.|++++|.++. +|.. +..+++|+.||++.|..
T Consensus 97 ~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~ 152 (176)
T 1a9n_A 97 NNSLV-ELGDLDPLASLKSLTYLCILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKL 152 (176)
T ss_dssp SCCCC-CGGGGGGGGGCTTCCEEECCSSGGGG-STTHHHHHHHHCTTCSEETTEECCH
T ss_pred CCcCC-cchhhHhhhcCCCCCEEEecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCH
Confidence 66663 3443 45555555555555555553 2332 44444455555444443
No 390
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.43 E-value=3.4e-12 Score=140.89 Aligned_cols=168 Identities=11% Similarity=0.123 Sum_probs=84.2
Q ss_pred CccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCcccc
Q 047196 317 NVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSI 396 (827)
Q Consensus 317 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~ 396 (827)
+|+.+.+.. .++..-+..|.++.+|+.++++.|+++...... +.. .+|+.+.+.++ ++..-
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~a----------------F~~-~~L~~l~lp~~-l~~I~ 218 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPAST----------------FVY-AGIEEVLLPVT-LKEIG 218 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTT----------------TTT-CCCSEEECCTT-CCEEC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhh----------------Eee-cccCEEEeCCc-hheeh
Confidence 455555543 444444556666666666666666555322211 111 15666666533 54444
Q ss_pred CccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCccc-----ccCCcc
Q 047196 397 PQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFS-----GSIPSC 471 (827)
Q Consensus 397 p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~-----~~~p~~ 471 (827)
...|.++++|+.+++..| ++..-...|.+ .+|+.+++ .|.++..-+..|.++++|+.+++.+|.+. ..-+..
T Consensus 219 ~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~a 295 (401)
T 4fdw_A 219 SQAFLKTSQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYC 295 (401)
T ss_dssp TTTTTTCTTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTT
T ss_pred hhHhhCCCCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHH
Confidence 556666666666666653 34333444554 45666666 23344333445555555665555555443 222334
Q ss_pred ccCCCCCCccccCCCcccccCCccccccccccccCC
Q 047196 472 LGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDL 507 (827)
Q Consensus 472 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL 507 (827)
|.+|++|+.++|. |.++..-..+|.++++|+.++|
T Consensus 296 F~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~l 330 (401)
T 4fdw_A 296 LEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTI 330 (401)
T ss_dssp TTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEE
T ss_pred hhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEE
Confidence 4555555555554 2344444444444444444444
No 391
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.42 E-value=1.5e-13 Score=142.70 Aligned_cols=125 Identities=18% Similarity=0.253 Sum_probs=88.9
Q ss_pred ccccceEecCCceEEEEEEe-cCCcE--EEEEEEcccch------------------------HHHHHHHHHHHHHHhcC
Q 047196 677 FSKENLIGVGSFGSVYKGRL-HDGIE--VAIKVFHQNCA------------------------MALKSFEAECEVMKNIR 729 (827)
Q Consensus 677 ~~~~~~iG~G~fg~Vy~~~~-~~g~~--vAvK~l~~~~~------------------------~~~~~~~~Ei~~l~~l~ 729 (827)
|+..+.||+|+||.||+|+. .+|+. ||||+++.... .....+.+|++++++++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678899999999999987 68888 99998754311 11236889999999999
Q ss_pred CCCc--eEEEeeeecCCceeeeeeccCC---CCC-------CHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee-
Q 047196 730 HRNH--VKRISSCSNEDFKALDCLHSTN---CSL-------NIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF- 796 (827)
Q Consensus 730 H~ni--v~~~~~~~~~~~~~l~~l~~~~---~~l-------~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl- 796 (827)
|+++ ...+. ....+.+++++.... ..+ .+.+...++.++++++.|||. +.+|+||||||+|||
T Consensus 129 ~~~i~~p~~~~--~~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~~qi~~~l~~lH~--~~givHrDlkp~NILl 204 (258)
T 1zth_A 129 EAGVSVPQPYT--YMKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIFNDVVENVKRLYQ--EAELVHADLSEYNIMY 204 (258)
T ss_dssp HTTCCCCCEEE--EETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHHHHHHHHHHHHHH--TSCEECSSCSTTSEEE
T ss_pred hCCCCCCeEEE--cCCCEEEEEecCCCCCccccHHHHhhccChHHHHHHHHHHHHHHHHHHH--HCCEEeCCCCHHHEEE
Confidence 8864 23332 234445555552100 011 122457899999999999962 678999999999987
Q ss_pred -------eeccccccc
Q 047196 797 -------DFGIGRLLT 805 (827)
Q Consensus 797 -------DFGla~~~~ 805 (827)
|||+|....
T Consensus 205 ~~~~~liDFG~a~~~~ 220 (258)
T 1zth_A 205 IDKVYFIDMGQAVTLR 220 (258)
T ss_dssp SSSEEECCCTTCEETT
T ss_pred cCcEEEEECcccccCC
Confidence 999997654
No 392
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.41 E-value=6.1e-12 Score=138.89 Aligned_cols=161 Identities=12% Similarity=0.143 Sum_probs=88.7
Q ss_pred CCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccc
Q 047196 316 PNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGS 395 (827)
Q Consensus 316 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~ 395 (827)
.+|+.+.+..+ ++..-...|.++++|+.+++..| ++.+-. ..+.. .+|+.+++ .++++..
T Consensus 203 ~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~---------------~aF~~--~~L~~i~l-p~~i~~I 262 (401)
T 4fdw_A 203 AGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQ---------------EAFRE--SGITTVKL-PNGVTNI 262 (401)
T ss_dssp CCCSEEECCTT-CCEECTTTTTTCTTCCCEECCTT-CCEECT---------------TTTTT--CCCSEEEE-ETTCCEE
T ss_pred cccCEEEeCCc-hheehhhHhhCCCCCCEEecCCC-ccCccc---------------ccccc--CCccEEEe-CCCccEE
Confidence 45555555532 44444556666667777666543 221111 11111 15666766 3445545
Q ss_pred cCccccCCCCCceEeccCcccc-----ccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCc
Q 047196 396 IPQLISNLSNLLLLDLEGNKLT-----GSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPS 470 (827)
Q Consensus 396 ~p~~~~~l~~L~~L~Ls~N~l~-----g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~ 470 (827)
-+..|.++++|+.+++.+|.+. ...+..|.+|++|+.++|. +.+...-...|.++++|+.++|.+| ++..-+.
T Consensus 263 ~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~-l~~I~~~ 340 (401)
T 4fdw_A 263 ASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLARFEIP-ESIRILGQGLLGGNRKVTQLTIPAN-VTQINFS 340 (401)
T ss_dssp CTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCCEECCC-TTCCEECTTTTTTCCSCCEEEECTT-CCEECTT
T ss_pred ChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCCeEEeC-CceEEEhhhhhcCCCCccEEEECcc-ccEEcHH
Confidence 5667777777777777776654 2344556666777777666 3354333455666666666666443 4433445
Q ss_pred cccCCCCCCccccCCCcccccCCcccccc
Q 047196 471 CLGNLTSLRSPDLGSNRLTSVLPSTFWNL 499 (827)
Q Consensus 471 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l 499 (827)
.|.++ +|+.+++++|.+....+..|.++
T Consensus 341 aF~~~-~L~~l~l~~n~~~~l~~~~F~~~ 368 (401)
T 4fdw_A 341 AFNNT-GIKEVKVEGTTPPQVFEKVWYGF 368 (401)
T ss_dssp SSSSS-CCCEEEECCSSCCBCCCSSCCCS
T ss_pred hCCCC-CCCEEEEcCCCCcccccccccCC
Confidence 56666 66666666665555444444444
No 393
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.40 E-value=4.5e-13 Score=129.60 Aligned_cols=107 Identities=22% Similarity=0.264 Sum_probs=64.0
Q ss_pred ccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEccc
Q 047196 454 LNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSR 533 (827)
Q Consensus 454 L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~ 533 (827)
.+.+++++|+++ .+|..+. ++|++|+|++|.|++..|..|..+++|++|||++|+|++..+..+..+++|+.|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 345555555555 3444432 4556666666666665555566666666666666666655555556666666666666
Q ss_pred ceeeecccccccCCCCCCEEECCCCcceee
Q 047196 534 NNFSGDIPSTIGDLKDLQNISLACNGLEGL 563 (827)
Q Consensus 534 N~l~g~ip~~~~~l~~L~~L~Ls~N~l~g~ 563 (827)
|+|++..|..|..+++|+.|+|++|.++..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 117 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDCA 117 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCTT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCCC
Confidence 666655555666666666666666666544
No 394
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.40 E-value=9.1e-13 Score=127.41 Aligned_cols=106 Identities=25% Similarity=0.238 Sum_probs=66.2
Q ss_pred ccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCC
Q 047196 382 LENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAG 461 (827)
Q Consensus 382 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 461 (827)
.+.+++++|+++. +|..+ .++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~~-ip~~~--~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLAS-VPTGI--PTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCSS-CCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcCc-cCccC--CCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 5667777777764 44443 25666677777776666666666666666666666666655555556666666666666
Q ss_pred CcccccCCccccCCCCCCccccCCCcccc
Q 047196 462 NKFSGSIPSCLGNLTSLRSPDLGSNRLTS 490 (827)
Q Consensus 462 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 490 (827)
|++++..+..|..+++|++|+|++|.+..
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 88 NQLKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred CccCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 66665444456666666666666665554
No 395
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=1e-12 Score=127.46 Aligned_cols=105 Identities=20% Similarity=0.249 Sum_probs=58.9
Q ss_pred cEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCceEEcccc
Q 047196 455 NTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVIGINLSRN 534 (827)
Q Consensus 455 ~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~Ls~N 534 (827)
+.+++++|+++ .+|..+. ++|++|+|++|++++..|..|.++++|++|+|++|+|++..+..+..+++|+.|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 34555555553 3444332 45555555555555555555555555555555555555544444555666666666666
Q ss_pred eeeecccccccCCCCCCEEECCCCccee
Q 047196 535 NFSGDIPSTIGDLKDLQNISLACNGLEG 562 (827)
Q Consensus 535 ~l~g~ip~~~~~l~~L~~L~Ls~N~l~g 562 (827)
+|++..+..|..+++|+.|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 6665444456666666666666666653
No 396
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.37 E-value=1.8e-12 Score=125.72 Aligned_cols=106 Identities=27% Similarity=0.295 Sum_probs=62.9
Q ss_pred ccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCC
Q 047196 382 LENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAG 461 (827)
Q Consensus 382 L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~ 461 (827)
-+.+++++|+++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 355666666664 4454432 5666666666666666666666666666666666666654444455666666666666
Q ss_pred CcccccCCccccCCCCCCccccCCCcccc
Q 047196 462 NKFSGSIPSCLGNLTSLRSPDLGSNRLTS 490 (827)
Q Consensus 462 N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 490 (827)
|++++..+..+..+++|++|+|++|.+..
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCccc
Confidence 66654434445555566666666555543
No 397
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.33 E-value=4.9e-11 Score=131.92 Aligned_cols=238 Identities=12% Similarity=0.068 Sum_probs=133.9
Q ss_pred hhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCC
Q 047196 285 AAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTG 364 (827)
Q Consensus 285 ~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~ 364 (827)
.+|.++++|+.+.+.++- ..++...+..+++|+.+.+..| ++......|.++..|+.+.+..+...-
T Consensus 156 ~aF~~c~~L~~i~l~~~~--~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i---------- 222 (394)
T 4fs7_A 156 EAFATCESLEYVSLPDSM--ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYL---------- 222 (394)
T ss_dssp TTTTTCTTCCEEECCTTC--CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEE----------
T ss_pred hhhcccCCCcEEecCCcc--ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEe----------
Confidence 345555555555554332 1233333334555555555444 333334455666666665554432210
Q ss_pred CCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCC
Q 047196 365 NPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSI 444 (827)
Q Consensus 365 n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~ 444 (827)
........ +|+.+.+..+ ++..-...|..+..|+.+.+..+... .....|..+..++.+....+.+.
T Consensus 223 -------~~~~~~~~-~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~--- 289 (394)
T 4fs7_A 223 -------GDFALSKT-GVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVP--- 289 (394)
T ss_dssp -------CTTTTTTC-CCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEEC---
T ss_pred -------ehhhcccC-CCceEEECCC-ceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeec---
Confidence 01111111 4566655432 23233455667777777777766443 44556777777777776654322
Q ss_pred CccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccc
Q 047196 445 PDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLR 524 (827)
Q Consensus 445 p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~ 524 (827)
...|..+.+|+.+.+.++ ++..-...|.++++|+.+++.++ ++..-..+|.++.+|+.+++..| ++..-...|.++.
T Consensus 290 ~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~ 366 (394)
T 4fs7_A 290 EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCI 366 (394)
T ss_dssp TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCT
T ss_pred cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCC
Confidence 234666777777777654 44344556777788888887644 66555677777788877777665 5544455677777
Q ss_pred cCceEEcccceeeecccccccCCCCCCEE
Q 047196 525 VVIGINLSRNNFSGDIPSTIGDLKDLQNI 553 (827)
Q Consensus 525 ~L~~L~Ls~N~l~g~ip~~~~~l~~L~~L 553 (827)
+|+.+++..+ ++ .+...|.++++|+.+
T Consensus 367 ~L~~i~lp~~-~~-~~~~~F~~c~~L~~I 393 (394)
T 4fs7_A 367 NLKKVELPKR-LE-QYRYDFEDTTKFKWI 393 (394)
T ss_dssp TCCEEEEEGG-GG-GGGGGBCTTCEEEEE
T ss_pred CCCEEEECCC-CE-EhhheecCCCCCcEE
Confidence 7777777654 22 234556666666543
No 398
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=99.33 E-value=4.8e-11 Score=132.01 Aligned_cols=329 Identities=13% Similarity=0.073 Sum_probs=159.9
Q ss_pred CccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhhcc
Q 047196 115 PPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICNYL 194 (827)
Q Consensus 115 ~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~~~ 194 (827)
..+|.++++|+.++|.. .++.+-..+|.++++|+.++|..+ ++..-...|.+..+|+.+.+..+ +. .+....+...
T Consensus 64 ~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~-l~-~i~~~aF~~~ 139 (394)
T 4fs7_A 64 YAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLM-LK-SIGVEAFKGC 139 (394)
T ss_dssp TTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTTTTTTC
T ss_pred HHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCc-ee-eecceeeecc
Confidence 45788888899999874 466555667888899999988754 54333455666666666554432 11 2222223222
Q ss_pred ccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEe
Q 047196 195 HYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVL 274 (827)
Q Consensus 195 ~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 274 (827)
..++...... .......+|.++++|+.+.+..+. ...-...|.++++|+.+++..| ++..-...|.+++.|+.+.+
T Consensus 140 ~~~~~~~~~~--~~~i~~~aF~~c~~L~~i~l~~~~-~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~ 215 (394)
T 4fs7_A 140 DFKEITIPEG--VTVIGDEAFATCESLEYVSLPDSM-ETLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEF 215 (394)
T ss_dssp CCSEEECCTT--CCEECTTTTTTCTTCCEEECCTTC-CEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCC
T ss_pred cccccccCcc--ccccchhhhcccCCCcEEecCCcc-ceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeec
Confidence 1122111111 111223445566666666665432 2233344555566665555544 33233344555555555554
Q ss_pred ecccCcccCchhhhcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCccee
Q 047196 275 GFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSG 354 (827)
Q Consensus 275 s~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g 354 (827)
..+... +...... ..+|+.+.+..+ ++..-...+.++..|+.+.+..+...
T Consensus 216 ~~~~~~--i~~~~~~-------------------------~~~l~~i~ip~~-~~~i~~~~f~~~~~l~~~~~~~~~~~- 266 (394)
T 4fs7_A 216 PNSLYY--LGDFALS-------------------------KTGVKNIIIPDS-FTELGKSVFYGCTDLESISIQNNKLR- 266 (394)
T ss_dssp CTTCCE--ECTTTTT-------------------------TCCCCEEEECTT-CCEECSSTTTTCSSCCEEEECCTTCE-
T ss_pred CCCceE--eehhhcc-------------------------cCCCceEEECCC-ceecccccccccccceeEEcCCCcce-
Confidence 443221 1122222 234444444322 22222344555666666665544321
Q ss_pred ecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEE
Q 047196 355 IIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLY 434 (827)
Q Consensus 355 ~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~ 434 (827)
+.. ..+.... .++.+....+.+ ....|..+.+|+.+.+..+ ++..-...|.++.+|+.++
T Consensus 267 -i~~--------------~~F~~~~-~l~~~~~~~~~i---~~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~ 326 (394)
T 4fs7_A 267 -IGG--------------SLFYNCS-GLKKVIYGSVIV---PEKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSID 326 (394)
T ss_dssp -ECS--------------CTTTTCT-TCCEEEECSSEE---CTTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEEC
T ss_pred -eec--------------ccccccc-ccceeccCceee---ccccccccccccccccccc-cceechhhhcCCCCCCEEE
Confidence 000 0111111 344444433322 1234555666666666543 4433345566666666666
Q ss_pred CCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccc
Q 047196 435 LPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILF 504 (827)
Q Consensus 435 Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~ 504 (827)
+..+ ++..-...|.++.+|+.+++..| ++..-...|.+|++|+.+++..+ +. .+...|.++++|+.
T Consensus 327 lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~lp~~-~~-~~~~~F~~c~~L~~ 392 (394)
T 4fs7_A 327 LPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINLKKVELPKR-LE-QYRYDFEDTTKFKW 392 (394)
T ss_dssp CCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTCCEEEEEGG-GG-GGGGGBCTTCEEEE
T ss_pred eCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCCCEEEECCC-CE-EhhheecCCCCCcE
Confidence 6533 44233445566666666666554 44333445666666666666543 21 12334555555443
No 399
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.27 E-value=2.1e-13 Score=149.16 Aligned_cols=161 Identities=19% Similarity=0.181 Sum_probs=68.6
Q ss_pred CCCCEEECCCCCCCccCChhhhhc-----cccceEEecCCCCCCccccc-cCCCCCCcEEEcCCCCCCCCcchhHhhc--
Q 047196 122 SSLTTLNLSHNKLSGDIPPSIFTM-----HKLKFLDFSDNQLSGSLSSV-TFNLSSVLDIRLDSDKLSGELPVNICNY-- 193 (827)
Q Consensus 122 ~~L~~L~Ls~N~l~g~~p~~~~~l-----~~L~~LdLs~N~l~g~~p~~-~~~l~~L~~L~L~~n~l~g~ip~~~~~~-- 193 (827)
+.|++|+|++|.++......+..+ ++|++|||++|.++...... ...+.+|++|+|++|.++..-...+...
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 345555555555554333333332 45555555555554221111 1122233334444443332212222211
Q ss_pred --cccccEEEeecccccc----cCCccCCCCCCCcEEEccCCCCccc----CCCcCcCCccccEEEccccccccc----c
Q 047196 194 --LHYLKVLFLAKNMFHG----QIPLALSKCKRLQLLNLGFKKLSGA----IPKEISNLTILRKISLRNNKLRGE----I 259 (827)
Q Consensus 194 --~~~L~~L~Ls~N~l~~----~~p~~l~~l~~L~~L~L~~n~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~~----~ 259 (827)
..+|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|++|+|++|.|+.. +
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 1245555555555442 1222334445555555555555421 233344444555555555555432 2
Q ss_pred cccccCcCCCcEEEeecccCccc
Q 047196 260 PHEIGYLPNLENLVLGFNNLVGV 282 (827)
Q Consensus 260 p~~~~~l~~L~~L~Ls~N~l~~~ 282 (827)
+..+...++|++|+|++|.|+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~ 254 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSE 254 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHH
Confidence 22333345555555555555443
No 400
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.22 E-value=9.6e-13 Score=143.92 Aligned_cols=137 Identities=15% Similarity=0.153 Sum_probs=88.7
Q ss_pred ccccceEEecCCCCCCcccccc----C-CCCCCcEEEcCCCCCCCCcchhHhhccccccEEEeecccccccCCccC----
Q 047196 145 MHKLKFLDFSDNQLSGSLSSVT----F-NLSSVLDIRLDSDKLSGELPVNICNYLHYLKVLFLAKNMFHGQIPLAL---- 215 (827)
Q Consensus 145 l~~L~~LdLs~N~l~g~~p~~~----~-~l~~L~~L~L~~n~l~g~ip~~~~~~~~~L~~L~Ls~N~l~~~~p~~l---- 215 (827)
++.|++|+|++|.++......+ . ...+|++|+|++|.++..-...+...+.+|++|+|++|.++......+
T Consensus 71 ~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L 150 (372)
T 3un9_A 71 LSSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLL 150 (372)
T ss_dssp HTTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHH
T ss_pred HhhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHH
Confidence 5789999999999986433332 2 236888888888888754445555555678888888887765433333
Q ss_pred -CCCCCCcEEEccCCCCcc----cCCCcCcCCccccEEEccccccccc----ccccccCcCCCcEEEeecccCcc
Q 047196 216 -SKCKRLQLLNLGFKKLSG----AIPKEISNLTILRKISLRNNKLRGE----IPHEIGYLPNLENLVLGFNNLVG 281 (827)
Q Consensus 216 -~~l~~L~~L~L~~n~l~~----~~p~~~~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~~ 281 (827)
...++|+.|+|++|.++. .++..+..+++|++|+|++|.|+.. ++..+...++|++|+|++|.++.
T Consensus 151 ~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 151 LHDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp HSTTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred HhcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 245667777777777753 2333445566677777777776532 24445556667777777776654
No 401
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=2.3e-11 Score=132.09 Aligned_cols=105 Identities=20% Similarity=0.196 Sum_probs=77.5
Q ss_pred cEEEccCC-cCccccCccccCCCCCceEeccC-ccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecC
Q 047196 383 ENIYISNC-NIGGSIPQLISNLSNLLLLDLEG-NKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLA 460 (827)
Q Consensus 383 ~~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls 460 (827)
..++.+++ ++++ +|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++..|..|.++++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 34677777 7774 666 77788888888885 88887777778888888888888888887777777778888888888
Q ss_pred CCcccccCCccccCCCCCCccccCCCcccc
Q 047196 461 GNKFSGSIPSCLGNLTSLRSPDLGSNRLTS 490 (827)
Q Consensus 461 ~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~ 490 (827)
+|+|++..+..+..++ |+.|+|++|.+..
T Consensus 89 ~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 89 FNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 8888755455555544 7777777777654
No 402
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.18 E-value=3.5e-11 Score=130.70 Aligned_cols=104 Identities=21% Similarity=0.169 Sum_probs=59.1
Q ss_pred eEeccCc-cccccccccccCCCCCcEEECCC-CCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCC
Q 047196 408 LLDLEGN-KLTGSIPVTFGRLQKLQGLYLPF-NKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGS 485 (827)
Q Consensus 408 ~L~Ls~N-~l~g~~p~~~~~l~~L~~L~Ls~-N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~ 485 (827)
.++.+++ ++++ +|. +..+++|+.|+|++ |+|++..|..|.++++|+.|+|++|+|++..|..|.++++|++|||++
T Consensus 12 ~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~ 89 (347)
T 2ifg_A 12 GLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSF 89 (347)
T ss_dssp CEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECCS
T ss_pred EEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCCC
Confidence 3455555 5553 444 55556666666653 666555555556666666666666666655555556666666666666
Q ss_pred CcccccCCccccccccccccCCCCCCCCC
Q 047196 486 NRLTSVLPSTFWNLKDILFFDLSSNSLDG 514 (827)
Q Consensus 486 N~l~~~~p~~~~~l~~L~~LdLs~N~l~g 514 (827)
|+|++..+..|..++ |+.|+|++|.+..
T Consensus 90 N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 90 NALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp SCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred CccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 666554444444444 5666666665553
No 403
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.11 E-value=1e-10 Score=126.29 Aligned_cols=118 Identities=14% Similarity=0.129 Sum_probs=78.2
Q ss_pred cccccceEecCCceEEEEEEecCCcEEEEEEEcccch-----------------H-----HHHHHHHHHHHHHhcCCCCc
Q 047196 676 KFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCA-----------------M-----ALKSFEAECEVMKNIRHRNH 733 (827)
Q Consensus 676 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~-----------------~-----~~~~~~~Ei~~l~~l~H~ni 733 (827)
-|+..+.||+|+||.||+|...+|+.||||+++.... . ......+|...|.++.+..+
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 3788899999999999999988999999998753210 0 01123567888888865543
Q ss_pred eEEEeeeecCCceeeeeeccCC--CCCCHHHHHHHHHHHHHHHHHHHhcCCCCeEEccCCCccee
Q 047196 734 VKRISSCSNEDFKALDCLHSTN--CSLNIFDKLNIMIDVASALEYLHFSHSTPVIHCDLKPKNVF 796 (827)
Q Consensus 734 v~~~~~~~~~~~~~l~~l~~~~--~~l~~~~~~~i~~~ia~~L~~Lh~~h~~~iiHrDlK~~NIl 796 (827)
.....+.......+|+++.... ......+...++.+++.++.|+| +.+||||||||.|||
T Consensus 176 ~vp~p~~~~~~~LVME~i~G~~L~~l~~~~~~~~l~~qll~~l~~lH---~~gIVHrDLKp~NIL 237 (397)
T 4gyi_A 176 PVPEPIAQSRHTIVMSLVDALPMRQVSSVPDPASLYADLIALILRLA---KHGLIHGDFNEFNIL 237 (397)
T ss_dssp SCCCEEEEETTEEEEECCSCEEGGGCCCCSCHHHHHHHHHHHHHHHH---HTTEECSCCSTTSEE
T ss_pred CCCeeeeccCceEEEEecCCccHhhhcccHHHHHHHHHHHHHHHHHH---HCCCcCCCCCHHHEE
Confidence 2211122223344555543211 01122234568889999999996 467999999999999
No 404
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=99.10 E-value=5.1e-09 Score=115.60 Aligned_cols=309 Identities=12% Similarity=0.104 Sum_probs=135.4
Q ss_pred CCccCCCCCCCcEEEccCCC---CcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCcccCchhh
Q 047196 211 IPLALSKCKRLQLLNLGFKK---LSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLVGVVPAAI 287 (827)
Q Consensus 211 ~p~~l~~l~~L~~L~L~~n~---l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~ 287 (827)
-..+|.++++|+.+.+..|. ++..-...|.++.+|+.+.+..+ ++..-...|..+.+|+.+.+..+ +.......|
T Consensus 79 g~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~-~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F 156 (394)
T 4gt6_A 79 GSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS-VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMF 156 (394)
T ss_dssp CTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT-CSEECTTTTTTCTTCCEEECCTT-CCEECTTTT
T ss_pred hHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc-cceehhhhhhhhcccccccccce-eeeecccce
Confidence 34455566666666655442 33233344555555655554433 33233345555666666666532 333334455
Q ss_pred hcCCCccEEEecCCccccccChhhhcCCCCccEEeCcCCccccccCccccCCCCCcEEEcCCCcceeecCCCccCCCCCC
Q 047196 288 FNMSTVKKIYLLDNSLLGSFSLGIDLSLPNVERLNLGLNRFSGTIPSFITNASKLVYLDMGTNSFSGIIPNTIGLTGNPL 367 (827)
Q Consensus 288 ~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l 367 (827)
.++.+|+.+.+.++- ..+....+ ....|+.+.+..+- ...-...+.++.++.......+.....- .
T Consensus 157 ~~c~~L~~i~~~~~~--~~I~~~aF-~~~~l~~i~ip~~~-~~i~~~af~~c~~l~~~~~~~~~~~~~~-~--------- 222 (394)
T 4gt6_A 157 SYCYSLHTVTLPDSV--TAIEERAF-TGTALTQIHIPAKV-TRIGTNAFSECFALSTITSDSESYPAID-N--------- 222 (394)
T ss_dssp TTCTTCCEEECCTTC--CEECTTTT-TTCCCSEEEECTTC-CEECTTTTTTCTTCCEEEECCSSSCBSS-S---------
T ss_pred eccccccccccccee--eEeccccc-cccceeEEEECCcc-cccccchhhhccccceeccccccccccc-c---------
Confidence 555666665554431 12222222 22345555554332 2223345556666665554433321100 0
Q ss_pred cccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCcc
Q 047196 368 DGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQ 447 (827)
Q Consensus 368 ~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~ 447 (827)
.+... +.........+.....+..+.+. +.++..-...|.++..|+.+.+..+... .-...
T Consensus 223 ------~~~~~-----------~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~a 283 (394)
T 4gt6_A 223 ------VLYEK-----------SANGDYALIRYPSQREDPAFKIP-NGVARIETHAFDSCAYLASVKMPDSVVS-IGTGA 283 (394)
T ss_dssp ------CEEEE-----------CTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTTTCSSCCEEECCTTCCE-ECTTT
T ss_pred ------eeecc-----------cccccccccccccccccceEEcC-CcceEcccceeeecccccEEecccccce-ecCcc
Confidence 00000 00000000000011122222221 1122222334555555666555443321 22334
Q ss_pred ccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCccccccccccccCCCCCCCCCCCcccccccccCc
Q 047196 448 LCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFWNLKDILFFDLSSNSLDGPLSLDIGNLRVVI 527 (827)
Q Consensus 448 ~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~ 527 (827)
|.+++.|+.+.+. +.++..-...|.+|.+|+.++|..+ ++..-..+|.++.+|+.+.+..+ ++..-...|.++++|+
T Consensus 284 F~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~ 360 (394)
T 4gt6_A 284 FMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALN 360 (394)
T ss_dssp TTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCC
T ss_pred cccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCC
Confidence 5555666666654 2333333445666666666666543 44444556666666666666433 4433345566666677
Q ss_pred eEEcccceeeecccccccCCCCCCEEECCCCcc
Q 047196 528 GINLSRNNFSGDIPSTIGDLKDLQNISLACNGL 560 (827)
Q Consensus 528 ~L~Ls~N~l~g~ip~~~~~l~~L~~L~Ls~N~l 560 (827)
.+++.+|.... ..+..+.+|+.+.+..|.+
T Consensus 361 ~i~~~~~~~~~---~~~~~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 361 NIEYSGSRSQW---NAISTDSGLQNLPVAPGSI 390 (394)
T ss_dssp EEEESSCHHHH---HTCBCCCCC----------
T ss_pred EEEECCceeeh---hhhhccCCCCEEEeCCCCE
Confidence 77776665432 3455666677666655543
No 405
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=98.99 E-value=8.2e-08 Score=105.87 Aligned_cols=318 Identities=12% Similarity=0.110 Sum_probs=147.2
Q ss_pred CccccCCC-CCCEEECCCCCCCccCChhhhhccccceEEecCCC---CCCccccccCCCCCCcEEEcCCCCCCCCcchhH
Q 047196 115 PPQLGNLS-SLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQ---LSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNI 190 (827)
Q Consensus 115 ~~~l~~L~-~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~---l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~ 190 (827)
..+|.+.+ .|+.+.+..+ ++.+-..+|.++++|+.+.++.|. ++..-...|.+..+|+.+.+..+
T Consensus 56 ~~aF~~~~~~L~sI~iP~s-vt~Ig~~AF~~C~~L~~i~~~~n~p~~l~~Ig~~aF~~c~~L~~i~~~~~---------- 124 (394)
T 4gt6_A 56 DRVFCNYKYVLTSVQIPDT-VTEIGSNAFYNCTSLKRVTIQDNKPSCVKKIGRQAFMFCSELTDIPILDS---------- 124 (394)
T ss_dssp TTTTTTCCSCCCEEEECTT-CCEECTTTTTTCTTCCEEEEGGGCCCCCCEECTTTTTTCTTCCBCGGGTT----------
T ss_pred HhhccCCCCcCEEEEECCC-eeEEhHHHhhCCccCceEeecCCCCCeeeEechhhchhcccceeeccCCc----------
Confidence 34677764 5888888754 665666788889999999988774 33222334555555554433322
Q ss_pred hhccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCc
Q 047196 191 CNYLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLE 270 (827)
Q Consensus 191 ~~~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~ 270 (827)
++......|.++.+|+.+.+..+ +...-...|.++..|+.+.+..+ ++..-...|. ..+|+
T Consensus 125 ----------------~~~I~~~aF~~c~~L~~i~lp~~-~~~I~~~~F~~c~~L~~i~~~~~-~~~I~~~aF~-~~~l~ 185 (394)
T 4gt6_A 125 ----------------VTEIDSEAFHHCEELDTVTIPEG-VTSVADGMFSYCYSLHTVTLPDS-VTAIEERAFT-GTALT 185 (394)
T ss_dssp ----------------CSEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEECCTT-CCEECTTTTT-TCCCS
T ss_pred ----------------cceehhhhhhhhcccccccccce-eeeecccceecccccccccccce-eeEecccccc-cccee
Confidence 11122334455555555555432 22223334555555555555443 2212222332 24555
Q ss_pred EEEeecccCcccCchhhhcCCCccEEEecCCccccccChhhh-------------cCCCCccEEeCcCCccccccCcccc
Q 047196 271 NLVLGFNNLVGVVPAAIFNMSTVKKIYLLDNSLLGSFSLGID-------------LSLPNVERLNLGLNRFSGTIPSFIT 337 (827)
Q Consensus 271 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~-------------~~l~~L~~L~L~~N~l~~~~p~~~~ 337 (827)
.+.+..+- +......+.++.++.......+..... ...+. .....+..+.+. +.++..-...|.
T Consensus 186 ~i~ip~~~-~~i~~~af~~c~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ip-~~v~~i~~~aF~ 262 (394)
T 4gt6_A 186 QIHIPAKV-TRIGTNAFSECFALSTITSDSESYPAI-DNVLYEKSANGDYALIRYPSQREDPAFKIP-NGVARIETHAFD 262 (394)
T ss_dssp EEEECTTC-CEECTTTTTTCTTCCEEEECCSSSCBS-SSCEEEECTTSCEEEEECCTTCCCSEEECC-TTEEEECTTTTT
T ss_pred EEEECCcc-cccccchhhhccccceecccccccccc-cceeecccccccccccccccccccceEEcC-CcceEcccceee
Confidence 55554432 223334455555555554433322100 00000 000111111111 111111222334
Q ss_pred CCCCCcEEEcCCCcceeecCCCccCCCCCCcccCCCchhcccccccEEEccCCcCccccCccccCCCCCceEeccCcccc
Q 047196 338 NASKLVYLDMGTNSFSGIIPNTIGLTGNPLDGVLPTSIGNLSMSLENIYISNCNIGGSIPQLISNLSNLLLLDLEGNKLT 417 (827)
Q Consensus 338 ~l~~L~~L~Ls~N~l~g~~p~~~~l~~n~l~g~~p~~~~~~~~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~ 417 (827)
++.+| +.+.+.++.. ..-...|.++++|+.+.+. +.++
T Consensus 263 ~c~~L----------------------------------------~~i~lp~~~~-~I~~~aF~~c~~L~~i~l~-~~i~ 300 (394)
T 4gt6_A 263 SCAYL----------------------------------------ASVKMPDSVV-SIGTGAFMNCPALQDIEFS-SRIT 300 (394)
T ss_dssp TCSSC----------------------------------------CEEECCTTCC-EECTTTTTTCTTCCEEECC-TTCC
T ss_pred ecccc----------------------------------------cEEecccccc-eecCcccccccccccccCC-Cccc
Confidence 44444 4444433222 1223445556666666664 3344
Q ss_pred ccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCCCCccccCCCcccccCCcccc
Q 047196 418 GSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTSLRSPDLGSNRLTSVLPSTFW 497 (827)
Q Consensus 418 g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~ 497 (827)
......|.++.+|+.+++..+ ++..-...|.++.+|+.+.+..+ ++..-...|.+|++|+.+++.+|.... ..+.
T Consensus 301 ~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~ 375 (394)
T 4gt6_A 301 ELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAIS 375 (394)
T ss_dssp EECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCB
T ss_pred ccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhh
Confidence 344455666666666666543 43233445666666666666543 443334456667777777776664432 2455
Q ss_pred ccccccccCCCCCCC
Q 047196 498 NLKDILFFDLSSNSL 512 (827)
Q Consensus 498 ~l~~L~~LdLs~N~l 512 (827)
.+.+|+.+.+..|.+
T Consensus 376 ~~~~L~~i~i~~~~~ 390 (394)
T 4gt6_A 376 TDSGLQNLPVAPGSI 390 (394)
T ss_dssp CCCCC----------
T ss_pred ccCCCCEEEeCCCCE
Confidence 556666666655544
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.89 E-value=1.1e-09 Score=118.54 Aligned_cols=181 Identities=14% Similarity=0.167 Sum_probs=97.7
Q ss_pred CCcEEEEEcCCCCCcc-c-------cCccccCCCCCCEEECCCCCCC---------ccCChhhhhccccceEEecCCCCC
Q 047196 97 SHRVTALNISSLNLQG-T-------IPPQLGNLSSLTTLNLSHNKLS---------GDIPPSIFTMHKLKFLDFSDNQLS 159 (827)
Q Consensus 97 ~~~v~~L~L~~~~l~g-~-------~~~~l~~L~~L~~L~Ls~N~l~---------g~~p~~~~~l~~L~~LdLs~N~l~ 159 (827)
..+|+.|.+......| . +..+...+++|+.|.+..+... +.++..+..+++|+.|+|++|.-.
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 3578888888766553 2 2334667889999999776431 235566778899999999887311
Q ss_pred CccccccCCCCCCcEEEcCCCCCCCCcchhHhh-ccccccEEEeec--ccccccC-----CccC--CCCCCCcEEEccCC
Q 047196 160 GSLSSVTFNLSSVLDIRLDSDKLSGELPVNICN-YLHYLKVLFLAK--NMFHGQI-----PLAL--SKCKRLQLLNLGFK 229 (827)
Q Consensus 160 g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~-~~~~L~~L~Ls~--N~l~~~~-----p~~l--~~l~~L~~L~L~~n 229 (827)
.++. + .+++|+.|+|..+.+....-..+.. .+++|+.|+|+. |...+.. ...+ ..+++|++|+|.+|
T Consensus 186 -~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~ 262 (362)
T 2ra8_A 186 -SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDA 262 (362)
T ss_dssp -BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESC
T ss_pred -eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCC
Confidence 2232 2 3677888888777654332223331 355777777753 2221110 0111 23455555555555
Q ss_pred CCcccCCCcC---cCCccccEEEccccccccc----ccccccCcCCCcEEEeecccCc
Q 047196 230 KLSGAIPKEI---SNLTILRKISLRNNKLRGE----IPHEIGYLPNLENLVLGFNNLV 280 (827)
Q Consensus 230 ~l~~~~p~~~---~~l~~L~~L~Ls~N~l~~~----~p~~~~~l~~L~~L~Ls~N~l~ 280 (827)
.++...+..+ ..+++|++|+|+.|.+.+. ++..+..+++|+.|+|++|.++
T Consensus 263 ~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~ 320 (362)
T 2ra8_A 263 EEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLS 320 (362)
T ss_dssp TTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCC
T ss_pred CCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCC
Confidence 5543221111 1345555555555555432 2222233455555555555444
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.85 E-value=3.4e-11 Score=123.83 Aligned_cols=24 Identities=13% Similarity=-0.013 Sum_probs=17.9
Q ss_pred CCCcccceecCCCCCcEEEEEcCC
Q 047196 84 SVCNWIGITCNVNSHRVTALNISS 107 (827)
Q Consensus 84 ~~C~W~gv~C~~~~~~v~~L~L~~ 107 (827)
..|+|.|+.|+....+|+.+...+
T Consensus 76 ~l~~~~g~i~~~~~~ki~~~v~~~ 99 (267)
T 3rw6_A 76 ALKAVNYKILDRENRRISIIINSS 99 (267)
T ss_dssp HHHHTTSSCBCTTSCBCCCEEEEC
T ss_pred HHHhcCcEEECCCCCEEEEEEecC
Confidence 468999999997666776665544
No 408
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.70 E-value=1.1e-08 Score=110.72 Aligned_cols=211 Identities=15% Similarity=0.103 Sum_probs=112.3
Q ss_pred CCCCCEEECCCCCCCc-cC-------ChhhhhccccceEEecCCCCCCccccccCCCCCCcEEEcCCCCCCCCcchhHhh
Q 047196 121 LSSLTTLNLSHNKLSG-DI-------PPSIFTMHKLKFLDFSDNQLSGSLSSVTFNLSSVLDIRLDSDKLSGELPVNICN 192 (827)
Q Consensus 121 L~~L~~L~Ls~N~l~g-~~-------p~~~~~l~~L~~LdLs~N~l~g~~p~~~~~l~~L~~L~L~~n~l~g~ip~~~~~ 192 (827)
++.++.|.+....+.| .. ..+...+++|+.|.+..+.....--.+.. .+.++ .+..
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~---------------~~~L~-~ll~ 169 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIE---------------QVDLS-PVLD 169 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCB---------------CCBCH-HHHH
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhccccccc---------------ccCHH-HHHh
Confidence 3467788887666543 21 33456788999999977644210000000 01122 2223
Q ss_pred ccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCc--CCccccEEEccc--cccccc-----ccccc
Q 047196 193 YLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEIS--NLTILRKISLRN--NKLRGE-----IPHEI 263 (827)
Q Consensus 193 ~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~--~l~~L~~L~Ls~--N~l~~~-----~p~~~ 263 (827)
..++|+.|+|++|.-. .++. + .+++|+.|++..+.++......+. .+++|++|+|+. |...+. +...+
T Consensus 170 ~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l 246 (362)
T 2ra8_A 170 AMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLF 246 (362)
T ss_dssp TCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGS
T ss_pred cCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHH
Confidence 3446666666665211 1222 2 256777777766665433222232 566777777653 221111 11112
Q ss_pred --cCcCCCcEEEeecccCcccCchhhh---cCCCccEEEecCCccccccChhhh---cCCCCccEEeCcCCccccccCcc
Q 047196 264 --GYLPNLENLVLGFNNLVGVVPAAIF---NMSTVKKIYLLDNSLLGSFSLGID---LSLPNVERLNLGLNRFSGTIPSF 335 (827)
Q Consensus 264 --~~l~~L~~L~Ls~N~l~~~~p~~~~---~l~~L~~L~l~~n~l~~~~~~~~~---~~l~~L~~L~L~~N~l~~~~p~~ 335 (827)
..+++|++|+|.+|.++...+..+. .+++|++|+++.|.+.+.-...+. ..+++|+.|+|+.|.++...-..
T Consensus 247 ~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~ 326 (362)
T 2ra8_A 247 SKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSDEMKKE 326 (362)
T ss_dssp CTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCHHHHHH
T ss_pred hcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCHHHHHH
Confidence 2467777777777777654444443 366778888877776653211111 14678888888888876543333
Q ss_pred ccCCCCCcEEEcCCCc
Q 047196 336 ITNASKLVYLDMGTNS 351 (827)
Q Consensus 336 ~~~l~~L~~L~Ls~N~ 351 (827)
+...- ...++++.++
T Consensus 327 l~~al-g~~~~~~~~~ 341 (362)
T 2ra8_A 327 LQKSL-PMKIDVSDSQ 341 (362)
T ss_dssp HHHHC-CSEEECCSBC
T ss_pred HHHHc-CCEEEecCCc
Confidence 33211 4567888776
No 409
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.61 E-value=2.6e-06 Score=93.17 Aligned_cols=80 Identities=4% Similarity=-0.020 Sum_probs=43.5
Q ss_pred ccccccEEEeecccccccCCccCCCCCCCcEEEccCCCCcccCCCcCcCCccccEEEcccccccccccccccCcCCCcEE
Q 047196 193 YLHYLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENL 272 (827)
Q Consensus 193 ~~~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L 272 (827)
...+|+.+.+..+ ++..-..+|.+|.+|+.+++..+ ++..-...|.++ +|+.+.+..+ ++..-...|.. .+|+.+
T Consensus 44 ~~~~i~~v~ip~~-vt~Ig~~aF~~C~~L~~I~lp~~-v~~Ig~~aF~~c-~l~~i~~~~~-l~~I~~~aF~~-~~L~~i 118 (379)
T 4h09_A 44 DRDRISEVRVNSG-ITSIGEANFNSCYNMTKVTVAST-VTSIGDGAFADT-KLQSYTGMER-VKKFGDYVFQG-TDLDDF 118 (379)
T ss_dssp GGGGCSEEEECTT-EEEECTTTTTTCTTCCEEEECTT-CCEECTTTTTTC-CCCEEEECTT-CCEECTTTTTT-CCCSEE
T ss_pred cccCCEEEEeCCC-ccChHHHHhhCCCCCCEEEeCCc-ceEechhhhcCC-CCceEECCce-eeEeccceecc-CCcccc
Confidence 3446777777543 44444566777777777777543 544444556655 4555555433 33222233333 356666
Q ss_pred Eeecc
Q 047196 273 VLGFN 277 (827)
Q Consensus 273 ~Ls~N 277 (827)
++..+
T Consensus 119 ~lp~~ 123 (379)
T 4h09_A 119 EFPGA 123 (379)
T ss_dssp ECCTT
T ss_pred cCCCc
Confidence 66543
No 410
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=98.59 E-value=9.5e-06 Score=88.69 Aligned_cols=107 Identities=13% Similarity=0.065 Sum_probs=48.7
Q ss_pred ccccCCCCCceEeccCccccccccccccCCCCCcEEECCCCCCCCCCCccccccccccEEecCCCcccccCCccccCCCC
Q 047196 398 QLISNLSNLLLLDLEGNKLTGSIPVTFGRLQKLQGLYLPFNKLAGSIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLTS 477 (827)
Q Consensus 398 ~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~ 477 (827)
..|.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|+.+.+.++.++..-...|.+|.+
T Consensus 234 ~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~ 311 (379)
T 4h09_A 234 GAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVK 311 (379)
T ss_dssp TTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTT
T ss_pred ccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCC
Confidence 34444555555555433 33233334455555555555332 22222234444555555555555444333444555555
Q ss_pred CCccccCCCcccccCCccccccccccccCC
Q 047196 478 LRSPDLGSNRLTSVLPSTFWNLKDILFFDL 507 (827)
Q Consensus 478 L~~L~Ls~N~l~~~~p~~~~~l~~L~~LdL 507 (827)
|+.++|..+ ++.+-..+|.++++|+.+.+
T Consensus 312 L~~i~lp~~-l~~I~~~aF~~C~~L~~i~i 340 (379)
T 4h09_A 312 LSSVTLPTA-LKTIQVYAFKNCKALSTISY 340 (379)
T ss_dssp CCEEECCTT-CCEECTTTTTTCTTCCCCCC
T ss_pred CCEEEcCcc-ccEEHHHHhhCCCCCCEEEE
Confidence 555555432 33333444555555554444
No 411
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=98.34 E-value=1.3e-06 Score=90.16 Aligned_cols=107 Identities=14% Similarity=0.049 Sum_probs=72.4
Q ss_pred HHhhcccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC-CCCceEEEeeeecCCcee--e
Q 047196 672 RATEKFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR-HRNHVKRISSCSNEDFKA--L 748 (827)
Q Consensus 672 ~~~~~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~-H~niv~~~~~~~~~~~~~--l 748 (827)
.....|......+.|+.+.||+.... |..+++|+...........+.+|+++++.++ |..+.++++++......+ +
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~ 89 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLM 89 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEE
Confidence 34456777777888889999999754 6789999986432222346889999999995 556667888777655433 3
Q ss_pred eeeccCCC---CCCHHHHHHHHHHHHHHHHHHHh
Q 047196 749 DCLHSTNC---SLNIFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 749 ~~l~~~~~---~l~~~~~~~i~~~ia~~L~~Lh~ 779 (827)
+++..... ..+..+...++.+++++++.||.
T Consensus 90 e~i~G~~l~~~~~~~~~~~~~~~~l~~~l~~LH~ 123 (263)
T 3tm0_A 90 SEADGVLCSEEYEDEQSPEKIIELYAECIRLFHS 123 (263)
T ss_dssp ECCSSEEHHHHCCTTTCHHHHHHHHHHHHHHHHH
T ss_pred EecCCeehhhccCCcccHHHHHHHHHHHHHHHhC
Confidence 44332210 00112345788999999999997
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.32 E-value=6.2e-08 Score=94.56 Aligned_cols=46 Identities=13% Similarity=0.103 Sum_probs=29.3
Q ss_pred cCccccCCCCCCEEECCCC-CCCcc----CChhhhhccccceEEecCCCCC
Q 047196 114 IPPQLGNLSSLTTLNLSHN-KLSGD----IPPSIFTMHKLKFLDFSDNQLS 159 (827)
Q Consensus 114 ~~~~l~~L~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~LdLs~N~l~ 159 (827)
+...+...+.|++|+|++| .+... +...+...++|++|||++|.+.
T Consensus 28 l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 28 LKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 3445666777778888877 76532 3334445567777777777765
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.30 E-value=8.8e-08 Score=98.37 Aligned_cols=67 Identities=22% Similarity=0.309 Sum_probs=38.9
Q ss_pred cCCCCCcEEECCCCCCCC--CCCccccccccccEEecCCCcccccCCccccCCC--CCCccccCCCcccccCC
Q 047196 425 GRLQKLQGLYLPFNKLAG--SIPDQLCHLARLNTLGLAGNKFSGSIPSCLGNLT--SLRSPDLGSNRLTSVLP 493 (827)
Q Consensus 425 ~~l~~L~~L~Ls~N~l~g--~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~--~L~~L~Ls~N~l~~~~p 493 (827)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..+. +|++|+|++|.+.+.+|
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~ 237 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFR 237 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCS
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccC
Confidence 456666666666666665 3445555666666666666666643 2222222 56666666666665444
No 414
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.20 E-value=1.7e-07 Score=91.48 Aligned_cols=44 Identities=9% Similarity=0.075 Sum_probs=23.2
Q ss_pred ccccCCCCCcEEECCCC-CCCCC----CCccccccccccEEecCCCccc
Q 047196 422 VTFGRLQKLQGLYLPFN-KLAGS----IPDQLCHLARLNTLGLAGNKFS 465 (827)
Q Consensus 422 ~~~~~l~~L~~L~Ls~N-~l~g~----~p~~~~~l~~L~~L~Ls~N~l~ 465 (827)
..+...+.|+.|+|++| .+... +...+...++|++|+|++|++.
T Consensus 30 ~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~ 78 (185)
T 1io0_A 30 RIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSN 78 (185)
T ss_dssp HHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCC
T ss_pred HHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCC
Confidence 34555667777777776 66421 1222333445555555555554
No 415
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=98.17 E-value=1.9e-06 Score=88.72 Aligned_cols=93 Identities=12% Similarity=0.052 Sum_probs=61.0
Q ss_pred ecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCc-e-EEEeeeecCC--ceeeeeeccCCCCCC
Q 047196 684 GVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNH-V-KRISSCSNED--FKALDCLHSTNCSLN 759 (827)
Q Consensus 684 G~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~ni-v-~~~~~~~~~~--~~~l~~l~~~~~~l~ 759 (827)
+.|..+.||+....+|..++||+.... ....+.+|+++++.+++.++ | +++++...++ +.+++++........
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~---~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~~~ 105 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG---ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLLSS 105 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC---TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETTTS
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc---cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccCcC
Confidence 456679999998777888999997543 22457889999999976554 4 4677665544 334444433221111
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 047196 760 IFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 760 ~~~~~~i~~~ia~~L~~Lh~ 779 (827)
..+...++.++++.++.||.
T Consensus 106 ~~~~~~~~~~l~~~l~~lh~ 125 (264)
T 1nd4_A 106 HLAPAEKVSIMADAMRRLHT 125 (264)
T ss_dssp CCCHHHHHHHHHHHHHHHTT
T ss_pred cCCHhHHHHHHHHHHHHHhC
Confidence 11234678888899999875
No 416
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=97.80 E-value=5.5e-05 Score=81.91 Aligned_cols=99 Identities=12% Similarity=0.142 Sum_probs=67.1
Q ss_pred cceEecCCceEEEEEEecCCcEEEEEEEc--ccc-hHHHHHHHHHHHHHHhcCC--CCceEEEeeeecC-----Cceeee
Q 047196 680 ENLIGVGSFGSVYKGRLHDGIEVAIKVFH--QNC-AMALKSFEAECEVMKNIRH--RNHVKRISSCSNE-----DFKALD 749 (827)
Q Consensus 680 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~--~~~-~~~~~~~~~Ei~~l~~l~H--~niv~~~~~~~~~-----~~~~l~ 749 (827)
.+.++.|.++.||+.+..+ ..+++|+.. ... ......+.+|+++++.+++ ..+.+.+.++.+. .+.+++
T Consensus 43 ~~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 4568899999999988764 578888765 322 1223468899999999984 4567788887665 344555
Q ss_pred eeccCC------CCCCHHHHHHHHHHHHHHHHHHHh
Q 047196 750 CLHSTN------CSLNIFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 750 ~l~~~~------~~l~~~~~~~i~~~ia~~L~~Lh~ 779 (827)
++.... ..++..++..++.++++.|+.||.
T Consensus 122 ~v~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~ 157 (359)
T 3dxp_A 122 FVSGRVLWDQSLPGMSPAERTAIYDEMNRVIAAMHT 157 (359)
T ss_dssp CCCCBCCCCTTCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCeecCCCccccCCHHHHHHHHHHHHHHHHHHhC
Confidence 554322 124566778899999999999996
No 417
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.16 E-value=0.00015 Score=69.00 Aligned_cols=34 Identities=3% Similarity=-0.133 Sum_probs=17.2
Q ss_pred cccEEEeecccccccCCccCCCCCCCcEEEccCC
Q 047196 196 YLKVLFLAKNMFHGQIPLALSKCKRLQLLNLGFK 229 (827)
Q Consensus 196 ~L~~L~Ls~N~l~~~~p~~l~~l~~L~~L~L~~n 229 (827)
+|+.||++++.++..--..+.++++|+.|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4566666655554332333445555555555554
No 418
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.15 E-value=0.0003 Score=66.88 Aligned_cols=84 Identities=12% Similarity=0.118 Sum_probs=49.6
Q ss_pred CCCcEEEccCCCCcccCCCcCcCCccccEEEccccc-ccccccccccCc----CCCcEEEeeccc-CcccCchhhhcCCC
Q 047196 219 KRLQLLNLGFKKLSGAIPKEISNLTILRKISLRNNK-LRGEIPHEIGYL----PNLENLVLGFNN-LVGVVPAAIFNMST 292 (827)
Q Consensus 219 ~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~-l~~~~p~~~~~l----~~L~~L~Ls~N~-l~~~~p~~~~~l~~ 292 (827)
.+|+.||++++.++..--..+.++++|++|+|++|. ++..-=..+..+ ++|++|+|++|. +|..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 467777777777664333445667777777777774 553322334443 357777777763 55433334555666
Q ss_pred ccEEEecCCc
Q 047196 293 VKKIYLLDNS 302 (827)
Q Consensus 293 L~~L~l~~n~ 302 (827)
|+.|+++++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 6666666654
No 419
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=96.93 E-value=0.0098 Score=62.84 Aligned_cols=96 Identities=16% Similarity=0.206 Sum_probs=63.2
Q ss_pred cccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCC---CCce-EEEeeeecCCceeeeee
Q 047196 676 KFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH---RNHV-KRISSCSNEDFKALDCL 751 (827)
Q Consensus 676 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H---~niv-~~~~~~~~~~~~~l~~l 751 (827)
.+...+.++.|..+.||+. |..+++|+.... .....+.+|.++++.+++ +--| +.++. ...+.+++++
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~--~~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~--~~~~lvme~i 109 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRD--SVRISQKRELELYRFLENCKLSYQIPAVVYQ--SDRFNIMKYI 109 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSH--HHHHHHHHHHHHHHHHTTSCCSSBCCCEEEE--CSSCEEEECC
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcH--HHHHHHHHHHHHHHHHHhcCCCCCcceEEec--CCcEEEEeec
Confidence 4455678999999999997 667888876432 224568999999999977 2222 33333 4556666665
Q ss_pred ccCCC------CCCHHHHHHHHHHHHHHHHHHHh
Q 047196 752 HSTNC------SLNIFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 752 ~~~~~------~l~~~~~~~i~~~ia~~L~~Lh~ 779 (827)
..... .++..++..++.++++.++.||.
T Consensus 110 ~G~~l~~~~~~~l~~~~~~~~~~~l~~~La~LH~ 143 (320)
T 3r70_A 110 KGERITYEQYHKLSEKEKDALAYDEATFLKELHS 143 (320)
T ss_dssp CCBCCCHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccccccccccCCHHHHHHHHHHHHHHHHHHhC
Confidence 54321 12344566788888888888874
No 420
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=96.39 E-value=0.017 Score=60.38 Aligned_cols=94 Identities=15% Similarity=0.132 Sum_probs=58.2
Q ss_pred cceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCC-CC--ceEEEeeeecCC-----ceeeeee
Q 047196 680 ENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH-RN--HVKRISSCSNED-----FKALDCL 751 (827)
Q Consensus 680 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H-~n--iv~~~~~~~~~~-----~~~l~~l 751 (827)
.+.++.|....||+.. ..+++|+-... .....+.+|+++++.+.+ .. +.+.+..+...+ +.+++++
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i 98 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKI 98 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEccc
Confidence 3568999999999853 46888885432 345678999999999843 22 223444433322 2233334
Q ss_pred ccCCC------CCCHHHHHHHHHHHHHHHHHHHh
Q 047196 752 HSTNC------SLNIFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 752 ~~~~~------~l~~~~~~~i~~~ia~~L~~Lh~ 779 (827)
..... .++..++..++.++++.++.||.
T Consensus 99 ~G~~l~~~~~~~l~~~~~~~~~~~l~~~la~LH~ 132 (304)
T 3sg8_A 99 KGVPLTPLLLNNLPKQSQNQAAKDLARFLSELHS 132 (304)
T ss_dssp CCEECCHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeECCccccccCCHHHHHHHHHHHHHHHHHHHc
Confidence 32211 23344566788888888888885
No 421
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=96.39 E-value=0.011 Score=61.35 Aligned_cols=54 Identities=17% Similarity=0.161 Sum_probs=42.6
Q ss_pred cccccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC
Q 047196 676 KFSKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR 729 (827)
Q Consensus 676 ~~~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~ 729 (827)
.....+.+|.|..+.||+.+..+|+.|.||+-..........|.+|++.|+.+.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLG 69 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHT
T ss_pred CeEEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHH
Confidence 345557789999999999999999999999865443333346889999999885
No 422
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=96.37 E-value=0.012 Score=61.14 Aligned_cols=95 Identities=13% Similarity=0.090 Sum_probs=68.4
Q ss_pred cccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCC---CceEEEeeeecCCceeeeeeccC
Q 047196 678 SKENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHR---NHVKRISSCSNEDFKALDCLHST 754 (827)
Q Consensus 678 ~~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~---niv~~~~~~~~~~~~~l~~l~~~ 754 (827)
...+.++.|.++.||+++..+|+.++||+...........|.+|++.|+.++|. .+.+.+++. ..+.+++++...
T Consensus 18 ~~~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~--~~~lvme~l~g~ 95 (288)
T 3d1u_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD--DRTLAMEWVDER 95 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE--TTEEEEECCCCC
T ss_pred cceeeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec--CcEEEEEecccC
Confidence 445679999999999999888999999996543222335789999999999876 356666653 455666666543
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhc
Q 047196 755 NCSLNIFDKLNIMIDVASALEYLHFS 780 (827)
Q Consensus 755 ~~~l~~~~~~~i~~~ia~~L~~Lh~~ 780 (827)
. .+. ..+.++++.|+.||..
T Consensus 96 ~--~~~----~~~~~lg~~LA~LH~~ 115 (288)
T 3d1u_A 96 P--PTP----EAAERFGHQLAAMHLA 115 (288)
T ss_dssp C--CCH----HHHHHHHHHHHHHHHT
T ss_pred C--CCh----HHHHHHHHHHHHHHcC
Confidence 2 222 3456788899999864
No 423
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.34 E-value=0.00059 Score=66.10 Aligned_cols=41 Identities=10% Similarity=0.255 Sum_probs=19.7
Q ss_pred cCCCCCCEEECCCC-CCCc----cCChhhhhccccceEEecCCCCC
Q 047196 119 GNLSSLTTLNLSHN-KLSG----DIPPSIFTMHKLKFLDFSDNQLS 159 (827)
Q Consensus 119 ~~L~~L~~L~Ls~N-~l~g----~~p~~~~~l~~L~~LdLs~N~l~ 159 (827)
.+-+.|++|+|++| +|.. .+-..+..-+.|+.|+|++|++.
T Consensus 38 ~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~ig 83 (197)
T 1pgv_A 38 EDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAIS 83 (197)
T ss_dssp TTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCB
T ss_pred hcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCC
Confidence 34455556666553 4431 12233334455555555555554
No 424
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.16 E-value=0.0089 Score=53.87 Aligned_cols=56 Identities=18% Similarity=0.239 Sum_probs=43.1
Q ss_pred EEEcCCCCCc-cccCccccCCCCCCEEECCCCCCCccCChhhhhccccceEEecCCCCC
Q 047196 102 ALNISSLNLQ-GTIPPQLGNLSSLTTLNLSHNKLSGDIPPSIFTMHKLKFLDFSDNQLS 159 (827)
Q Consensus 102 ~L~L~~~~l~-g~~~~~l~~L~~L~~L~Ls~N~l~g~~p~~~~~l~~L~~LdLs~N~l~ 159 (827)
.++.++++++ ..+|..+. .+|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5677777776 35554432 36899999999999766677888999999999999875
No 425
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.16 E-value=0.0029 Score=61.22 Aligned_cols=83 Identities=18% Similarity=0.287 Sum_probs=59.0
Q ss_pred CcEEEEEcCCC-CCcc----ccCccccCCCCCCEEECCCCCCCc----cCChhhhhccccceEEecCCCCCCc----ccc
Q 047196 98 HRVTALNISSL-NLQG----TIPPQLGNLSSLTTLNLSHNKLSG----DIPPSIFTMHKLKFLDFSDNQLSGS----LSS 164 (827)
Q Consensus 98 ~~v~~L~L~~~-~l~g----~~~~~l~~L~~L~~L~Ls~N~l~g----~~p~~~~~l~~L~~LdLs~N~l~g~----~p~ 164 (827)
..++.|+|+++ +|.. .+..++..-+.|+.|+|++|.|.. .+...+..-+.|++|+|++|.|... +-.
T Consensus 41 ~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala~ 120 (197)
T 1pgv_A 41 TDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLLR 120 (197)
T ss_dssp SSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHHH
T ss_pred CCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHHH
Confidence 46899999985 7753 244567778899999999999973 3445566778999999999999743 223
Q ss_pred ccCCCCCCcEEEcCCC
Q 047196 165 VTFNLSSVLDIRLDSD 180 (827)
Q Consensus 165 ~~~~l~~L~~L~L~~n 180 (827)
.+..-+.|++|+|+.|
T Consensus 121 aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 121 STLVTQSIVEFKADNQ 136 (197)
T ss_dssp HTTTTCCCSEEECCCC
T ss_pred HHhhCCceeEEECCCC
Confidence 3444445666666543
No 426
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.00 E-value=0.0096 Score=53.63 Aligned_cols=56 Identities=25% Similarity=0.367 Sum_probs=34.1
Q ss_pred EEEccCCCCc-ccCCCcCcCCccccEEEcccccccccccccccCcCCCcEEEeecccCc
Q 047196 223 LLNLGFKKLS-GAIPKEISNLTILRKISLRNNKLRGEIPHEIGYLPNLENLVLGFNNLV 280 (827)
Q Consensus 223 ~L~L~~n~l~-~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~ 280 (827)
.++.+++.++ ..+|..+. .+|++|+|++|+|+...+..|..+++|++|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4556666654 23444332 34667777777776555556666777777777777654
No 427
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=95.27 E-value=0.11 Score=55.88 Aligned_cols=58 Identities=9% Similarity=0.038 Sum_probs=41.2
Q ss_pred ccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCC--ceEEEeeeec
Q 047196 679 KENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRN--HVKRISSCSN 742 (827)
Q Consensus 679 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~n--iv~~~~~~~~ 742 (827)
..+.++.|....||+.+. +|..+++|+-... ..+.+|+.+++.+.... +-+.+..+..
T Consensus 45 ~i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~ 104 (362)
T 3ovc_A 45 DLMQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEF 104 (362)
T ss_dssp EEEEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEES
T ss_pred eEEECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccC
Confidence 346689999999999875 4788999986432 25888999999987543 2345555443
No 428
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=95.09 E-value=0.021 Score=62.22 Aligned_cols=60 Identities=15% Similarity=0.112 Sum_probs=38.3
Q ss_pred cceEecCCceEEEEEEec-CCcEEEEEEEcccch-------HHHHHHHHHHHHHHhcCC--CCce-EEEee
Q 047196 680 ENLIGVGSFGSVYKGRLH-DGIEVAIKVFHQNCA-------MALKSFEAECEVMKNIRH--RNHV-KRISS 739 (827)
Q Consensus 680 ~~~iG~G~fg~Vy~~~~~-~g~~vAvK~l~~~~~-------~~~~~~~~Ei~~l~~l~H--~niv-~~~~~ 739 (827)
.+.+|.|..+.||+++.. +++.|+||....... ....++..|+++++.+++ +..| +.+.+
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~ 105 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS 105 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE
Confidence 357899999999999754 468899998643211 123456789999988743 3444 34433
No 429
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=94.99 E-value=0.036 Score=59.30 Aligned_cols=64 Identities=8% Similarity=-0.034 Sum_probs=41.1
Q ss_pred cceE-ecCCceEEEEEEec-------CCcEEEEEEEcccc---hHHHHHHHHHHHHHHhcCC---CCceEEEeeeecC
Q 047196 680 ENLI-GVGSFGSVYKGRLH-------DGIEVAIKVFHQNC---AMALKSFEAECEVMKNIRH---RNHVKRISSCSNE 743 (827)
Q Consensus 680 ~~~i-G~G~fg~Vy~~~~~-------~g~~vAvK~l~~~~---~~~~~~~~~Ei~~l~~l~H---~niv~~~~~~~~~ 743 (827)
.+.+ +.|..+.+|+.+.. +|+.+++|+-.... ......+.+|+++++.++. -.+.+.+.++.+.
T Consensus 25 ~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~ 102 (357)
T 3ats_A 25 ESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTG 102 (357)
T ss_dssp EEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSS
T ss_pred EEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCC
Confidence 3567 78889999998754 25678888754322 0012457789888888753 2355566666543
No 430
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=94.93 E-value=0.15 Score=53.13 Aligned_cols=94 Identities=9% Similarity=-0.003 Sum_probs=54.5
Q ss_pred cceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCC---ceEEEeeeec-C--Cceeeeeecc
Q 047196 680 ENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRN---HVKRISSCSN-E--DFKALDCLHS 753 (827)
Q Consensus 680 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~n---iv~~~~~~~~-~--~~~~l~~l~~ 753 (827)
.+.++.|....||+. |..++||+-. .......+.+|+++++.+++.. +-+.+.++.. . .+.+++++..
T Consensus 24 v~~l~~G~~n~v~~v----g~~~VlR~~~--~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 24 VESLGEGFRNYAILV----NGDWVFRFPK--SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEES--SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eeecCCCcceeEEEE----CCEEEEEecC--CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 356888999999987 5678888743 2234567899999999998632 3344444432 1 2333443332
Q ss_pred CC------CCCCHHHHHHHHHHHHHHHHHHHh
Q 047196 754 TN------CSLNIFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 754 ~~------~~l~~~~~~~i~~~ia~~L~~Lh~ 779 (827)
.. ..++..++..++.++++.++.||.
T Consensus 98 ~~l~~~~~~~l~~~~~~~~~~~lg~~La~LH~ 129 (306)
T 3tdw_A 98 QILGEDGMAVLPDDAKDRLALQLAEFMNELSA 129 (306)
T ss_dssp EECHHHHHTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eECchhhhhhCCHHHHHHHHHHHHHHHHHHhc
Confidence 11 112333445555666666655553
No 431
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=93.76 E-value=0.38 Score=48.86 Aligned_cols=61 Identities=13% Similarity=0.012 Sum_probs=39.7
Q ss_pred eEecCCce-EEEEEEec-CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCC-CCceEEEeeeecCCc
Q 047196 682 LIGVGSFG-SVYKGRLH-DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH-RNHVKRISSCSNEDF 745 (827)
Q Consensus 682 ~iG~G~fg-~Vy~~~~~-~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H-~niv~~~~~~~~~~~ 745 (827)
.+..|..| .||+.... ++..+.||+-... ....+.+|.+.|+.+.. -.+-+.++++.+++.
T Consensus 31 ~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~ 94 (272)
T 4gkh_A 31 RDNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDD 94 (272)
T ss_dssp EEECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTE
T ss_pred EccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCe
Confidence 35556555 69987754 4677889986433 34567889999998853 223456666665543
No 432
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=90.46 E-value=0.38 Score=49.89 Aligned_cols=93 Identities=6% Similarity=-0.050 Sum_probs=49.7
Q ss_pred cceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCce-EEEeeeecCCceeeeeeccCCCCC
Q 047196 680 ENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV-KRISSCSNEDFKALDCLHSTNCSL 758 (827)
Q Consensus 680 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv-~~~~~~~~~~~~~l~~l~~~~~~l 758 (827)
.+.++.|....+|+. ..+.+|+-...... .....+|+++++.+....+. ++++.+.+.....++++. ....+
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~~~~~~~~v~e~i~-~g~~l 95 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHVDPATGVMVTRYIA-GAQTM 95 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEECTTTCCEEEECCT-TCEEC
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEEECCCCEEEEeecC-CCccC
Confidence 567899999999998 45788886543211 11235688777777543343 444444333445555551 11222
Q ss_pred CHHHH---HHHHHHHHHHHHHHHh
Q 047196 759 NIFDK---LNIMIDVASALEYLHF 779 (827)
Q Consensus 759 ~~~~~---~~i~~~ia~~L~~Lh~ 779 (827)
+.... -.+...+++.|+-+|.
T Consensus 96 ~~~~~~~~~~~~~~~~~~La~lH~ 119 (301)
T 3dxq_A 96 SPEKFKTRPGSPARAGEAFRKLHG 119 (301)
T ss_dssp CHHHHHHSTTHHHHHHHHHHHHHT
T ss_pred CHhhHhhhHHHHHHHHHHHHHHhC
Confidence 22111 1245556666666653
No 433
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=87.95 E-value=1.4 Score=48.04 Aligned_cols=26 Identities=19% Similarity=0.132 Sum_probs=20.9
Q ss_pred cceEecCCceEEEEEEecCCcEEEEEE
Q 047196 680 ENLIGVGSFGSVYKGRLHDGIEVAIKV 706 (827)
Q Consensus 680 ~~~iG~G~fg~Vy~~~~~~g~~vAvK~ 706 (827)
.+.+|.|..+.||+... +++.++||.
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~ 64 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQ 64 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEE
Confidence 35688999999999964 467899994
No 434
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=87.43 E-value=2.1 Score=44.81 Aligned_cols=43 Identities=19% Similarity=0.204 Sum_probs=24.0
Q ss_pred ceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhc
Q 047196 681 NLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNI 728 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l 728 (827)
+.++.|..+.||+....+| .+++|+.... . .+...|+++++.+
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-~---~~~~~e~~~l~~L 80 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-E---KKALFSIFAQDYL 80 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-H---HHHHHHHHHHHHH
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-H---HHHHHHHHHHHHH
Confidence 3456677899999987655 4889988652 1 2233445545444
No 435
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=86.81 E-value=1.5 Score=45.59 Aligned_cols=62 Identities=8% Similarity=0.102 Sum_probs=35.3
Q ss_pred cchhHHHHHhhcccc-----cceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC
Q 047196 665 FSYQDLFRATEKFSK-----ENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR 729 (827)
Q Consensus 665 ~~~~~~~~~~~~~~~-----~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~ 729 (827)
++.+++....+.|.. .+.++.|....+|+.+..+| .+++|+..... ..+.+..|+++++.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~ 73 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLA 73 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHH
Confidence 344455544444543 23466788899999987666 57789876521 1234566777777664
No 436
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=83.21 E-value=1.2 Score=47.40 Aligned_cols=53 Identities=17% Similarity=0.239 Sum_probs=30.1
Q ss_pred ceEecCCceEEEEEEecC---------CcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCce
Q 047196 681 NLIGVGSFGSVYKGRLHD---------GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV 734 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~~---------g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv 734 (827)
..++.|....+|+....+ ++.+.+|+...... .......|.++++.+....++
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~-~~~~~~~E~~~l~~L~~~g~~ 100 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVD-ELYNTISEFEVYKTMSKYKIA 100 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGG-GTSCHHHHHHHHHHHHHTTSS
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCcc-ceecHHHHHHHHHHHHhcCCC
Confidence 456778888999998654 26788888654322 111235788888777533444
No 437
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=82.23 E-value=3 Score=43.35 Aligned_cols=47 Identities=11% Similarity=0.103 Sum_probs=32.5
Q ss_pred ceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC
Q 047196 681 NLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR 729 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~ 729 (827)
..++ |....||+....+|+.+++|+..... .....+..|.++++.++
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~-~~~~~~~~E~~~~~~L~ 78 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER-WTADQILEEHQFALQLV 78 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT-SCHHHHHHHHHHHHHHH
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC-CCHHHHHHHHHHHHHHH
Confidence 3466 77889999877778789999985321 12345667888777764
No 438
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=79.26 E-value=9 Score=39.65 Aligned_cols=91 Identities=14% Similarity=0.141 Sum_probs=59.8
Q ss_pred ccceEecCCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcCC---CCceEEEeeeecCC--ceeeeeecc
Q 047196 679 KENLIGVGSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIRH---RNHVKRISSCSNED--FKALDCLHS 753 (827)
Q Consensus 679 ~~~~iG~G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H---~niv~~~~~~~~~~--~~~l~~l~~ 753 (827)
..+.++.|....+|+.+. ++..++||+-... ....|.+|.+.|+.+.. ..+.+.+.++...+ +.+++++..
T Consensus 40 ~~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eeEEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 346789999999999876 4668889986533 24568899999888852 34566777665443 344455544
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047196 754 TNCSLNIFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 754 ~~~~l~~~~~~~i~~~ia~~L~~Lh~ 779 (827)
.. .+. ..+.++++.|+.||.
T Consensus 116 ~~--~~~----~~~~~lG~~LA~LH~ 135 (312)
T 3jr1_A 116 SK--NKQ----SSFTIFAEKIAQLHQ 135 (312)
T ss_dssp CC--CCT----THHHHHHHHHHHHHH
T ss_pred CC--CCc----hhHHHHHHHHHHHHc
Confidence 32 211 244567778888885
No 439
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=76.53 E-value=0.19 Score=55.76 Aligned_cols=57 Identities=12% Similarity=0.052 Sum_probs=15.1
Q ss_pred ceEecCCceEEEEEEecC-CcEEEE------EEEcccc--hHHHHHHHHHHHHHHhcCCCCceEEEeee
Q 047196 681 NLIGVGSFGSVYKGRLHD-GIEVAI------KVFHQNC--AMALKSFEAECEVMKNIRHRNHVKRISSC 740 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~~-g~~vAv------K~l~~~~--~~~~~~~~~Ei~~l~~l~H~niv~~~~~~ 740 (827)
+.+| ||.||+|.+.. ..+||| |...... ....+.|.+|..+++..+|+|+++.+++.
T Consensus 148 ~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~ 213 (463)
T 3cxl_A 148 EHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFK 213 (463)
T ss_dssp TTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEE
T ss_pred ccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceE
Confidence 4465 99999998754 467999 7665422 22345788999999999999999876654
No 440
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=60.09 E-value=17 Score=39.87 Aligned_cols=95 Identities=14% Similarity=0.089 Sum_probs=54.2
Q ss_pred ceEecCCceEEEEEEecC-CcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCce-EEEeeeecCCceeeeeeccCCCCC
Q 047196 681 NLIGVGSFGSVYKGRLHD-GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV-KRISSCSNEDFKALDCLHSTNCSL 758 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~~-g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv-~~~~~~~~~~~~~l~~l~~~~~~l 758 (827)
+.|+.|-...+|+....+ +..+.+|+......... .-.+|.++++.+...+++ ++++.+ .+..+++++.......
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~~i-dR~~E~~vl~~L~~~gl~P~ll~~~--~~G~v~e~I~G~~l~~ 190 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDEII-NREREKKISCILYNKNIAKKIYVFF--TNGRIEEFMDGYALSR 190 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCSCS-CHHHHHHHHHHHTTSSSBCCEEEEE--TTEEEEECCCSEECCT
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhhhc-CHHHHHHHHHHHHhcCCCCCEEEEe--CCeEEEEeeCCccCCh
Confidence 568888889999998765 57788998743221111 115799999999766665 455544 3445666665422111
Q ss_pred CHHHHHHHHHHHHHHHHHHH
Q 047196 759 NIFDKLNIMIDVASALEYLH 778 (827)
Q Consensus 759 ~~~~~~~i~~~ia~~L~~Lh 778 (827)
.....-.++..+|+.|+-||
T Consensus 191 ~~l~~~~~~~~ia~~La~LH 210 (458)
T 2qg7_A 191 EDIKNPKFQKLIAKNLKLLH 210 (458)
T ss_dssp TTTTSHHHHHHHHHHHHHHH
T ss_pred hhcCCHHHHHHHHHHHHHHh
Confidence 11111245566677777776
No 441
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=55.98 E-value=20 Score=38.90 Aligned_cols=95 Identities=16% Similarity=0.135 Sum_probs=53.2
Q ss_pred ceEecCCceEEEEEEecC--------CcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCce-EEEeeeecCCceeeeee
Q 047196 681 NLIGVGSFGSVYKGRLHD--------GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV-KRISSCSNEDFKALDCL 751 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv-~~~~~~~~~~~~~l~~l 751 (827)
+.|+.|....||+....+ +..|.+|+...... ...+.+|..+++.+...+++ ++++.+. +..+++++
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~--~g~v~e~l 154 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFS--GGRLEEYI 154 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEET--TEEEECCC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeC--CCEEEEEe
Confidence 567888889999998753 47899998743211 13455798888888644443 4555432 33445555
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047196 752 HSTNCSLNIFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 752 ~~~~~~l~~~~~~~i~~~ia~~L~~Lh~ 779 (827)
............-.++..+|+.|+-||.
T Consensus 155 ~G~~l~~~~l~~~~~~~~ia~~La~LH~ 182 (429)
T 1nw1_A 155 PSRPLSCHEISLAHMSTKIAKRVAKVHQ 182 (429)
T ss_dssp CEEECCTTGGGSHHHHHHHHHHHHHHTT
T ss_pred CCcccChhhcCCHHHHHHHHHHHHHHhC
Confidence 3221111111112345555555555553
No 442
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=48.07 E-value=54 Score=33.65 Aligned_cols=46 Identities=7% Similarity=0.059 Sum_probs=21.2
Q ss_pred ceEecCCceE-EEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhcC
Q 047196 681 NLIGVGSFGS-VYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNIR 729 (827)
Q Consensus 681 ~~iG~G~fg~-Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~ 729 (827)
+.++.|.... +|+....+|..+.+|....... ..+..|+++++.++
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~ 70 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLR 70 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHH
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHH
Confidence 3455555444 6677654466777776433210 23455677766664
No 443
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=46.29 E-value=18 Score=25.13 Aligned_cols=13 Identities=15% Similarity=0.327 Sum_probs=4.9
Q ss_pred HHHHHHhhhhhcc
Q 047196 642 IIAVPLALKYKSI 654 (827)
Q Consensus 642 ~~~~~~~~~~~~~ 654 (827)
+++...++++|++
T Consensus 26 ii~~~~~~~~RRr 38 (44)
T 2ks1_B 26 VVALGIGLFMRRR 38 (44)
T ss_dssp HHHHHHHHHHHTT
T ss_pred HHHHHHHHHhhhh
Confidence 3333333444433
No 444
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=46.25 E-value=21 Score=37.92 Aligned_cols=96 Identities=10% Similarity=0.097 Sum_probs=48.0
Q ss_pred ceEecCCceEEEEEEec--------CCcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCce-EEEeeeecCCceeeeee
Q 047196 681 NLIGVGSFGSVYKGRLH--------DGIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHV-KRISSCSNEDFKALDCL 751 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~--------~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv-~~~~~~~~~~~~~l~~l 751 (827)
+.+..|....+|+.... +++.|.+|+.... ........+|.++++.+.-..+. ++++.+. +..+++++
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~-~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~--~g~v~e~i 132 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI-LQGVDSLVLESVMFAILAERSLGPQLYGVFP--EGRLEQYI 132 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEET--TEEEEECC
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc-cchHHHHHHHHHHHHHHHhcCCCCeEEEEcC--CccEEEEe
Confidence 45666788899999864 2478889885321 11234556899998888644444 3444443 23555555
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 047196 752 HSTNCSLNIFDKLNIMIDVASALEYLHF 779 (827)
Q Consensus 752 ~~~~~~l~~~~~~~i~~~ia~~L~~Lh~ 779 (827)
............-.+...+|+.|+-||.
T Consensus 133 ~G~~l~~~~l~~p~~~~~ia~~La~LH~ 160 (379)
T 3feg_A 133 PSRPLKTQELREPVLSAAIATKMAQFHG 160 (379)
T ss_dssp SEEECCGGGGGCHHHHHHHHHHHHHHHT
T ss_pred cCccCChhHhCCHHHHHHHHHHHHHHhC
Confidence 4321111111112344556666666653
No 445
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=41.22 E-value=34 Score=36.93 Aligned_cols=95 Identities=12% Similarity=0.167 Sum_probs=51.2
Q ss_pred ceEecCCceEEEEEEecC--------CcEEEEEEEcccchHHHHHHHHHHHHHHhcCCCCceE-EEeeeecCCceeeeee
Q 047196 681 NLIGVGSFGSVYKGRLHD--------GIEVAIKVFHQNCAMALKSFEAECEVMKNIRHRNHVK-RISSCSNEDFKALDCL 751 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l~H~niv~-~~~~~~~~~~~~l~~l 751 (827)
+.+..|-...+|+....+ +..|.+|+........ -.-.+|.++++.+....+++ +++ ...++.+++++
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~~-idR~~E~~~l~~L~~~gi~P~l~~--~~~~~~I~efI 152 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGKF-YDSKVELDVFRYLSNINIAPNIIA--DFPEGRIEEFI 152 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-CC-CCHHHHHHHHHHHHHTTSSCCEEE--EETTEEEEECC
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcchh-cCHHHHHHHHHHHHhcCCCCCEEE--EcCCCEEEEEe
Confidence 456778888999998753 5788898864432211 12257888888875444443 333 33455556655
Q ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHH
Q 047196 752 HSTNCSLNIFDKLNIMIDVASALEYLH 778 (827)
Q Consensus 752 ~~~~~~l~~~~~~~i~~~ia~~L~~Lh 778 (827)
............-.++..+|+.|+-||
T Consensus 153 ~G~~l~~~~l~~~~~~~~ia~~La~LH 179 (424)
T 3mes_A 153 DGEPLTTKQLQLTHICVEVAKNMGSLH 179 (424)
T ss_dssp CSEECCTGGGGSHHHHHHHHHHHHHHH
T ss_pred CCccCChhhcCCHHHHHHHHHHHHHHh
Confidence 542211111111234455555555555
No 446
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=37.88 E-value=36 Score=35.32 Aligned_cols=36 Identities=11% Similarity=0.098 Sum_probs=24.0
Q ss_pred CCceEEEEEEecCCcEEEEEEEcccchHHHHHHHHHHHHHHhc
Q 047196 686 GSFGSVYKGRLHDGIEVAIKVFHQNCAMALKSFEAECEVMKNI 728 (827)
Q Consensus 686 G~fg~Vy~~~~~~g~~vAvK~l~~~~~~~~~~~~~Ei~~l~~l 728 (827)
|....||+....+| .+++|+...... .+|+++++.+
T Consensus 34 g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L 69 (339)
T 3i1a_A 34 DTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLL 69 (339)
T ss_dssp CSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHH
T ss_pred ccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHH
Confidence 33679999987777 899998754331 3455555554
No 447
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=30.79 E-value=31 Score=23.90 Aligned_cols=7 Identities=14% Similarity=0.069 Sum_probs=2.8
Q ss_pred hhhhhcc
Q 047196 648 ALKYKSI 654 (827)
Q Consensus 648 ~~~~~~~ 654 (827)
++++|++
T Consensus 31 ~~~~RRR 37 (44)
T 2l2t_A 31 AVYVRRK 37 (44)
T ss_dssp HHHHHTT
T ss_pred HHHhhhh
Confidence 3344433
No 448
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=28.00 E-value=1.3e+02 Score=32.01 Aligned_cols=98 Identities=12% Similarity=0.110 Sum_probs=54.2
Q ss_pred ceEecCCceEEEEEEecC--------CcEEEEEEEcccchH---------H--H-------HHHHHHHHHHHhcCCCCce
Q 047196 681 NLIGVGSFGSVYKGRLHD--------GIEVAIKVFHQNCAM---------A--L-------KSFEAECEVMKNIRHRNHV 734 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~~~~~~---------~--~-------~~~~~Ei~~l~~l~H~niv 734 (827)
+.+..|-...+|+...++ ++.|.+++.-..... . . +....|.++++.+....+.
T Consensus 58 ~~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~ 137 (401)
T 3f2s_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLG 137 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSS
T ss_pred EEcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCC
Confidence 456668888999988753 367888886433211 0 1 1223488888888655555
Q ss_pred E-EEeeeecCCceeeeeeccCCCCCCHHHHHHHHHHHHHHHHHHHhc
Q 047196 735 K-RISSCSNEDFKALDCLHSTNCSLNIFDKLNIMIDVASALEYLHFS 780 (827)
Q Consensus 735 ~-~~~~~~~~~~~~l~~l~~~~~~l~~~~~~~i~~~ia~~L~~Lh~~ 780 (827)
+ +++... +....+++............-.+...+|+.|+-+|..
T Consensus 138 Pkl~~~~~--~G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~ 182 (401)
T 3f2s_A 138 PKLYGIFP--QGRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGM 182 (401)
T ss_dssp CCEEEEET--TEEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTC
T ss_pred CeEEEEeC--CCeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCC
Confidence 4 444432 3345555553221111122235667788888888754
No 449
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=24.72 E-value=2.2e+02 Score=30.04 Aligned_cols=28 Identities=18% Similarity=0.326 Sum_probs=19.8
Q ss_pred ceEecCCceEEEEEEecC--------CcEEEEEEEc
Q 047196 681 NLIGVGSFGSVYKGRLHD--------GIEVAIKVFH 708 (827)
Q Consensus 681 ~~iG~G~fg~Vy~~~~~~--------g~~vAvK~l~ 708 (827)
+.+.-|-.-.+|+.+.++ ...|.+++..
T Consensus 58 ~~lsGG~SN~~y~v~~~~~~~~~~~~~~~~llRi~g 93 (401)
T 3g15_A 58 SVIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYG 93 (401)
T ss_dssp EEEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEE
T ss_pred EEeCCccccceEEEEECCCCcccccCCCeEEEEeCC
Confidence 457778888999998654 2467777653
Done!