Your job contains 1 sequence.
>047202
MNFCYLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSAT
VDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPV
NNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLED
LVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV
FLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANA
RQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFL
SKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCL
SPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAY
KKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGK
KKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSA
AKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLF
GGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVV
KSMIQLLLEEDKPQK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 047202
(735 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2196265 - symbol:AT1G58060 species:3702 "Arabi... 2753 1.4e-286 1
TAIR|locus:2196255 - symbol:AT1G58050 species:3702 "Arabi... 2425 7.9e-252 1
UNIPROTKB|F1N1A2 - symbol:DHX57 "Uncharacterized protein"... 939 8.7e-122 2
MGI|MGI:2147067 - symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His... 941 9.2e-122 2
UNIPROTKB|F1M8G5 - symbol:Dhx57 "Protein Dhx57" species:1... 939 1.3e-121 2
UNIPROTKB|F1LSC4 - symbol:Dhx57 "Protein Dhx57" species:1... 939 4.4e-121 2
ZFIN|ZDB-GENE-030131-4078 - symbol:dhx57 "DEAH (Asp-Glu-A... 936 5.1e-119 2
UNIPROTKB|Q6P158 - symbol:DHX57 "Putative ATP-dependent R... 1169 9.8e-119 1
UNIPROTKB|E1C9G0 - symbol:DHX57 "Uncharacterized protein"... 1165 2.6e-118 1
UNIPROTKB|E2QX71 - symbol:DHX57 "Uncharacterized protein"... 1163 4.2e-118 1
UNIPROTKB|E1B9N7 - symbol:DHX29 "Uncharacterized protein"... 899 5.0e-116 2
UNIPROTKB|E2RID8 - symbol:DHX29 "Uncharacterized protein"... 887 3.4e-115 2
MGI|MGI:2145374 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) bo... 892 3.8e-115 2
UNIPROTKB|I3LG95 - symbol:DHX29 "Uncharacterized protein"... 883 7.7e-115 2
UNIPROTKB|Q7Z478 - symbol:DHX29 "ATP-dependent RNA helica... 881 7.8e-115 2
UNIPROTKB|F1SLN0 - symbol:DHX29 "Uncharacterized protein"... 878 2.1e-114 2
RGD|2318361 - symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box po... 886 3.0e-114 2
UNIPROTKB|J9P6V4 - symbol:DHX29 "Uncharacterized protein"... 874 1.0e-113 2
UNIPROTKB|E1C388 - symbol:DHX29 "Uncharacterized protein"... 874 1.7e-113 2
UNIPROTKB|I3LQ47 - symbol:DHX29 "Uncharacterized protein"... 869 2.9e-113 2
ZFIN|ZDB-GENE-050419-20 - symbol:si:dkey-119o24.1 "si:dke... 863 1.5e-108 2
UNIPROTKB|F6V8H1 - symbol:DHX36 "Uncharacterized protein"... 827 5.0e-108 3
TAIR|locus:2008144 - symbol:AT1G48650 species:3702 "Arabi... 920 8.1e-108 2
UNIPROTKB|E1C550 - symbol:DHX36 "Uncharacterized protein"... 811 9.2e-107 3
UNIPROTKB|H7C109 - symbol:DHX57 "Putative ATP-dependent R... 873 4.0e-106 2
TAIR|locus:2039280 - symbol:AT2G35920 species:3702 "Arabi... 830 5.8e-105 2
TAIR|locus:2038796 - symbol:AT2G01130 species:3702 "Arabi... 861 1.9e-104 2
UNIPROTKB|Q9H2U1 - symbol:DHX36 "Probable ATP-dependent R... 812 3.2e-104 2
UNIPROTKB|Q05B79 - symbol:DHX36 "Uncharacterized protein"... 814 8.3e-104 2
TAIR|locus:504954904 - symbol:ABO6 "ABA overly sensitive ... 852 2.8e-103 2
MGI|MGI:1919412 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) bo... 811 4.6e-103 2
RGD|1308767 - symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box po... 812 1.2e-102 2
FB|FBgn0030246 - symbol:CG1582 species:7227 "Drosophila m... 1010 6.9e-102 1
DICTYBASE|DDB_G0267516 - symbol:dhx57 "RWD domain-contain... 797 1.5e-92 2
UNIPROTKB|E2QTL7 - symbol:DHX36 "Uncharacterized protein"... 664 1.2e-89 3
UNIPROTKB|F1MNU7 - symbol:YTHDC2 "Uncharacterized protein... 597 4.5e-89 4
UNIPROTKB|E7EWK3 - symbol:DHX36 "Probable ATP-dependent R... 812 1.2e-87 2
UNIPROTKB|F5GZS0 - symbol:DHX36 "Probable ATP-dependent R... 650 4.4e-86 2
TAIR|locus:2052841 - symbol:HVT1 "helicase in vascular ti... 639 6.7e-86 3
ASPGD|ASPL0000008624 - symbol:AN5839 species:162425 "Emer... 642 1.2e-85 3
ZFIN|ZDB-GENE-070912-171 - symbol:dhx9 "DEAH (Asp-Glu-Ala... 541 1.1e-84 3
FB|FBgn0002774 - symbol:mle "maleless" species:7227 "Dros... 552 1.7e-83 3
UNIPROTKB|G4MR96 - symbol:MGG_04709 "Uncharacterized prot... 643 6.7e-83 2
DICTYBASE|DDB_G0275313 - symbol:dhx9 "ATP-dependent RNA h... 599 1.6e-82 3
FB|FBgn0032883 - symbol:CG9323 species:7227 "Drosophila m... 542 1.9e-82 3
UNIPROTKB|E2QZR7 - symbol:YTHDC2 "Uncharacterized protein... 591 4.5e-82 3
UNIPROTKB|Q9H6S0 - symbol:YTHDC2 "Probable ATP-dependent ... 617 3.7e-81 2
MGI|MGI:2448561 - symbol:Ythdc2 "YTH domain containing 2"... 617 3.8e-81 2
UNIPROTKB|F1RLG0 - symbol:YTHDC2 "Uncharacterized protein... 611 4.6e-81 2
UNIPROTKB|G5E5N3 - symbol:DHX9 "ATP-dependent RNA helicas... 522 1.2e-80 3
UNIPROTKB|Q28141 - symbol:DHX9 "ATP-dependent RNA helicas... 522 1.2e-80 3
UNIPROTKB|F1NS70 - symbol:YTHDC2 "Uncharacterized protein... 613 1.9e-80 2
RGD|1308548 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box pol... 522 2.1e-80 3
UNIPROTKB|J9PAM3 - symbol:YTHDC2 "Uncharacterized protein... 599 2.9e-80 2
MGI|MGI:108177 - symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box ... 523 7.1e-80 3
UNIPROTKB|Q5R874 - symbol:DHX9 "ATP-dependent RNA helicas... 519 1.4e-79 3
UNIPROTKB|Q08211 - symbol:DHX9 "ATP-dependent RNA helicas... 519 1.4e-79 3
UNIPROTKB|Q68FK8 - symbol:dhx9 "ATP-dependent RNA helicas... 519 3.6e-79 3
UNIPROTKB|E2RNT3 - symbol:DHX9 "Uncharacterized protein" ... 517 6.4e-79 3
TAIR|locus:2009200 - symbol:NIH "nuclear DEIH-boxhelicase... 572 3.1e-77 3
UNIPROTKB|I3LCY3 - symbol:DHX36 "Uncharacterized protein"... 625 1.0e-76 2
UNIPROTKB|I3LHZ6 - symbol:DHX9 "Uncharacterized protein" ... 507 4.6e-76 3
UNIPROTKB|F1P1F4 - symbol:DHX30 "Putative ATP-dependent R... 541 4.9e-72 2
UNIPROTKB|Q5ZI74 - symbol:DHX30 "Putative ATP-dependent R... 541 2.7e-71 2
UNIPROTKB|F1SLI4 - symbol:DHX30 "Uncharacterized protein"... 528 6.5e-70 2
UNIPROTKB|H7BXY3 - symbol:DHX30 "Putative ATP-dependent R... 527 6.5e-70 2
UNIPROTKB|J9P3P6 - symbol:DHX30 "Uncharacterized protein"... 526 7.3e-70 2
UNIPROTKB|Q7L2E3 - symbol:DHX30 "Putative ATP-dependent R... 527 7.4e-70 2
UNIPROTKB|F1N0J0 - symbol:DHX30 "Putative ATP-dependent R... 528 8.2e-70 2
UNIPROTKB|J9P264 - symbol:DHX30 "Uncharacterized protein"... 526 1.0e-69 2
UNIPROTKB|E2RL62 - symbol:DHX30 "Uncharacterized protein"... 526 1.1e-69 2
RGD|1308888 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box po... 524 1.6e-69 2
UNIPROTKB|Q5BJS0 - symbol:Dhx30 "Putative ATP-dependent R... 524 1.6e-69 2
MGI|MGI:1920081 - symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) bo... 524 1.7e-69 2
UNIPROTKB|D4A1V3 - symbol:Dhx30 "Putative ATP-dependent R... 524 1.7e-69 2
UNIPROTKB|Q2NKY8 - symbol:DHX30 "Putative ATP-dependent R... 528 3.5e-69 2
MGI|MGI:1918973 - symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) bo... 488 7.3e-68 3
UNIPROTKB|Q5R607 - symbol:DHX30 "Putative ATP-dependent R... 518 3.3e-67 2
POMBASE|SPBC15C4.05 - symbol:SPBC15C4.05 "ATP-dependent R... 533 1.4e-66 2
POMBASE|SPCC895.09c - symbol:ucp12 "ATP-dependent RNA hel... 463 9.4e-66 3
UNIPROTKB|E2RTK4 - symbol:DHX34 "Uncharacterized protein"... 475 3.2e-65 3
UNIPROTKB|E2RTK2 - symbol:DHX34 "Uncharacterized protein"... 475 4.0e-65 3
UNIPROTKB|E1BJ90 - symbol:DHX34 "Uncharacterized protein"... 475 1.3e-64 4
UNIPROTKB|Q14147 - symbol:DHX34 "Probable ATP-dependent R... 482 4.3e-64 3
UNIPROTKB|F1RLY9 - symbol:DHX34 "Uncharacterized protein"... 470 8.1e-64 3
ZFIN|ZDB-GENE-061207-30 - symbol:dhx34 "DEAH (Asp-Glu-Ala... 463 5.5e-63 3
UNIPROTKB|G4MZR9 - symbol:MGG_07059 "Pre-mRNA-splicing fa... 512 1.1e-61 2
SGD|S000004411 - symbol:YLR419W "Putative helicase with l... 409 1.9e-60 3
UNIPROTKB|I3LRK0 - symbol:I3LRK0 "Uncharacterized protein... 578 4.8e-60 2
CGD|CAL0005664 - symbol:orf19.6818 species:5476 "Candida ... 417 1.4e-59 5
UNIPROTKB|Q5ADM3 - symbol:CaO19.14110 "Putative uncharact... 417 1.4e-59 5
WB|WBGene00004355 - symbol:rha-1 species:6239 "Caenorhabd... 537 2.5e-58 2
FB|FBgn0030833 - symbol:CG8915 species:7227 "Drosophila m... 420 6.3e-56 3
UNIPROTKB|D3ZZG1 - symbol:Dhx35 "Protein Dhx35" species:1... 426 5.2e-50 4
UNIPROTKB|J3KR71 - symbol:DHX34 "Probable ATP-dependent R... 403 1.1e-49 2
UNIPROTKB|E1BDN4 - symbol:DHX35 "Uncharacterized protein"... 412 1.7e-48 4
UNIPROTKB|F1SDW0 - symbol:DHX35 "Uncharacterized protein"... 410 3.7e-48 4
FB|FBgn0052533 - symbol:CG32533 species:7227 "Drosophila ... 414 4.3e-48 3
RGD|1311165 - symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box po... 426 1.1e-47 4
UNIPROTKB|F5GXM6 - symbol:DHX35 "Probable ATP-dependent R... 414 1.3e-47 3
WARNING: Descriptions of 212 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2196265 [details] [associations]
symbol:AT1G58060 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
IPI:IPI00533149 RefSeq:NP_176103.2 UniGene:At.27872
ProteinModelPortal:F4I9Q5 SMR:F4I9Q5 PRIDE:F4I9Q5
EnsemblPlants:AT1G58060.1 GeneID:842173 KEGG:ath:AT1G58060
OMA:FLSYKSP Uniprot:F4I9Q5
Length = 1459
Score = 2753 (974.2 bits), Expect = 1.4e-286, P = 1.4e-286
Identities = 531/732 (72%), Positives = 613/732 (83%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTP-KLKVILMSATVDSN 64
L GD+ L VTH+IVDEVHERSLLGDFLLI+LK L+EKQS +T KLKVILMSATVD++
Sbjct: 727 LAGDRTLNDVTHIIVDEVHERSLLGDFLLIILKSLIEKQSCDNTSRKLKVILMSATVDAD 786
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKS--GPVNN 122
LFSRYFG CPVITA+GRTHPVTT+FLE++YESINY LA DS AA+R + S K G VN+
Sbjct: 787 LFSRYFGHCPVITAQGRTHPVTTHFLEEIYESINYLLAPDSPAALRSDTSIKDKLGSVND 846
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV 182
RRGKKNLVL+GWGDD LLSE+ +N +QT+QNLKRLNED IDY+LLE+L+
Sbjct: 847 RRGKKNLVLAGWGDDYLLSEDCLNPFYVSSNYNSYSDQTQQNLKRLNEDRIDYELLEELI 906
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFL 242
CH+D+TC EGAIL+FLPGVAEI++LLD LAASYRF GP++DWLL LHSS+AS +Q+KVFL
Sbjct: 907 CHIDDTCEEGAILIFLPGVAEIYMLLDMLAASYRFRGPAADWLLPLHSSIASSEQRKVFL 966
Query: 243 RPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RPP+ +RKVI ATNIAETSITIDDVVYV D G+HKENRYN QKKLSSMVEDWIS
Sbjct: 967 RPPKGLRKVIAATNIAETSITIDDVVYVIDSGKHKENRYNPQKKLSSMVEDWISQANARQ 1026
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
VKPGIC+SLYTR+R+EKLMRPYQVPEM RMPLVELCLQIKLL LG IK FLS+
Sbjct: 1027 RTGRAGRVKPGICFSLYTRYRFEKLMRPYQVPEMLRMPLVELCLQIKLLGLGHIKPFLSR 1086
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
ALEPP E A+T+AIS+L+EVGA+EGDEELTPLGHHLAKLPVDVLIGKM+L+GGIFGCLSP
Sbjct: 1087 ALEPPSEGAMTSAISLLHEVGAVEGDEELTPLGHHLAKLPVDVLIGKMLLYGGIFGCLSP 1146
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
ILSI+AFLSYKSPFIYPKDEKQNV+R KLALL+D SD N++ QSDHL++MVAY K
Sbjct: 1147 ILSIAAFLSYKSPFIYPKDEKQNVDRVKLALLSDNGVSSSDLNNNDRQSDHLLMMVAYDK 1206
Query: 483 WQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKK 542
W KIL +RG KAAQ+FC FLSSSVM MIRDMR+QFGTLLADIGLINLP + G+KK
Sbjct: 1207 WVKILQERGMKAAQRFCESKFLSSSVMRMIRDMRVQFGTLLADIGLINLPKTGEFSGRKK 1266
Query: 543 DDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAK 602
++LD WFSD +Q FNMY+ +VKAILCAGLYPN+AA ++G+ ++L K N K
Sbjct: 1267 ENLDVWFSDPTQPFNMYSQQPEVVKAILCAGLYPNIAANDKGITETTFNSLTKQGNQT-K 1325
Query: 603 AHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGG 662
++ WYDGRREVHIHPSSINS K+F++PFLVFLEKVETNKV+LRDTTIVSPFSILLFGG
Sbjct: 1326 SYSAWYDGRREVHIHPSSINSNFKAFQNPFLVFLEKVETNKVYLRDTTIVSPFSILLFGG 1385
Query: 663 SINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKS 722
SINV HQ+G VTIDGWLKV APAQTAVLFKELRLTLHSIL+ +IR P+ S I +NEVVKS
Sbjct: 1386 SINVHHQSGSVTIDGWLKVAAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVVKS 1445
Query: 723 MIQLLLEEDKPQ 734
M+ LL+EE KPQ
Sbjct: 1446 MVHLLIEEGKPQ 1457
>TAIR|locus:2196255 [details] [associations]
symbol:AT1G58050 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC079604
IPI:IPI00531251 PIR:F96613 RefSeq:NP_176102.1 UniGene:At.52250
ProteinModelPortal:Q9C6G0 SMR:Q9C6G0 PaxDb:Q9C6G0 PRIDE:Q9C6G0
EnsemblPlants:AT1G58050.1 GeneID:842172 KEGG:ath:AT1G58050
TAIR:At1g58050 HOGENOM:HOG000240812 InParanoid:Q9C6G0 OMA:ISPENED
PhylomeDB:Q9C6G0 ProtClustDB:CLSN2679369 Genevestigator:Q9C6G0
Uniprot:Q9C6G0
Length = 1417
Score = 2425 (858.7 bits), Expect = 7.9e-252, P = 7.9e-252
Identities = 482/734 (65%), Positives = 586/734 (79%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDT-PKLKVILMSATVDSN 64
L GD L VTH+IVDEVHERSL+GDFLLI+LK L+EKQS + PKLKVILMSATVD++
Sbjct: 707 LVGDTTLKDVTHIIVDEVHERSLMGDFLLIILKSLIEKQSWDNALPKLKVILMSATVDAH 766
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEAS--SKSGPVNN 122
FSRYFG CP+ITA+GRTHPVTTYFLED+YE Y LA DS AA+ + S K G VN
Sbjct: 767 QFSRYFGQCPIITAQGRTHPVTTYFLEDIYERTKYLLASDSPAALSSDTSITDKLGSVNV 826
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV 182
RGKKNL+L+GWGD L+SE+ +N ++K + V+DYDLLE+L+
Sbjct: 827 PRGKKNLMLAGWGDSYLVSEDSLNTSY-------------DSIKYIASAVVDYDLLEELI 873
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFL 242
CH+D+TC EGAILVFLPG++EI++LL+RLAASYRF G S DWLL LHSS+AS +QKKVFL
Sbjct: 874 CHIDDTCEEGAILVFLPGMSEINMLLNRLAASYRFRGASGDWLLPLHSSIASTEQKKVFL 933
Query: 243 RPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RPP+ IRKVIIATNIAETSITI+DVVYV D G+HKENRYN KKLSSMVEDW+S
Sbjct: 934 RPPKGIRKVIIATNIAETSITIEDVVYVIDSGKHKENRYNPHKKLSSMVEDWVSKANARQ 993
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
VKPG C+SLYTRHR+EKLMRPYQVPEM R+PLVELCL IKLL LG+IK FLSK
Sbjct: 994 RMGRAGRVKPGHCFSLYTRHRFEKLMRPYQVPEMLRVPLVELCLHIKLLGLGQIKPFLSK 1053
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
ALEPP E AI +AI +L++VGA+EGDEELTPLGHHLAKLPVD+LIGKM+L+GGIFGCLSP
Sbjct: 1054 ALEPPSESAINSAILLLHKVGALEGDEELTPLGHHLAKLPVDLLIGKMLLYGGIFGCLSP 1113
Query: 423 ILSISAFLSY-KSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYK 481
ILSI+AFLS KSPF+Y KDE QNV+R KLALL+DKLE S+ N++ QSDHL+++VAY+
Sbjct: 1114 ILSIAAFLSCCKSPFVYAKDE-QNVDRVKLALLSDKLESSSNLNNNDRQSDHLLMVVAYE 1172
Query: 482 KWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKK 541
KW +IL ++G KAA+ FC FL+SSVM M+R+ R++FG LLADIGLINLP K + G++
Sbjct: 1173 KWVRILHEQGFKAAESFCESKFLNSSVMRMMRERRVEFGMLLADIGLINLP-KGK--GRR 1229
Query: 542 KDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAA 601
K++ D WFSD++Q FNMY+ +VKAILCAGL PN+A +G+ ++ L K +
Sbjct: 1230 KENFDVWFSDKTQPFNMYSQEPEVVKAILCAGLCPNIA---EGL----VNRLTKPAEETQ 1282
Query: 602 KAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKV-FLRDTTIVSPFSILLF 660
+ + VW+DG+REVHIH +SIN K+F++PF+VFLEK+ET KV +L+DTT+VSPFSILLF
Sbjct: 1283 R-YAVWHDGKREVHIHRNSINKNCKAFQYPFIVFLEKLETKKVVYLQDTTVVSPFSILLF 1341
Query: 661 GGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVV 720
GGSINV HQ+G VTIDGWLK+TAPAQTAVLFKELRLTLHSIL+ +IR P+ S I +NEVV
Sbjct: 1342 GGSINVHHQSGSVTIDGWLKLTAPAQTAVLFKELRLTLHSILKDLIRKPEKSGIVHNEVV 1401
Query: 721 KSMIQLLLEEDKPQ 734
KSM+ LL+EE KPQ
Sbjct: 1402 KSMVHLLIEEGKPQ 1415
>UNIPROTKB|F1N1A2 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RAYKGWQ EMBL:DAAA02030601
EMBL:DAAA02030599 EMBL:DAAA02030600 IPI:IPI00709831
Ensembl:ENSBTAT00000019540 ArrayExpress:F1N1A2 Uniprot:F1N1A2
Length = 1382
Score = 939 (335.6 bits), Expect = 8.7e-122, Sum P(2) = 8.7e-122
Identities = 208/535 (38%), Positives = 324/535 (60%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA--LHSSVASVDQKKVFLRPPEKIR 249
GAILVFLPG+AEI +L ++L ++ F S+ + LHSS++S +Q+ VF++PP +
Sbjct: 843 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPMGVT 902
Query: 250 KVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXX 309
K+II+TNIAETSITIDDVVYV D G+ KE RY++ K + S+ + ++S
Sbjct: 903 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 962
Query: 310 VKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLL---SLGRIKIFLSKALEP 366
V G+C+ L+T H + + Q+PE+QR+PL +LCL+IK+L S ++ ++ +EP
Sbjct: 963 VASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFARLIEP 1022
Query: 367 PKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSI 426
P +++ + L ++GA+ DE LTPLG+HLA LPVDV IGK+MLFG IF CL P L+I
Sbjct: 1023 PHADSLRASKIRLRDLGALTPDETLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTI 1082
Query: 427 SAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKI 486
+A L++KSPF+ P D+K+ + KL + SD+L L+ AYK WQ +
Sbjct: 1083 AASLAFKSPFVSPWDKKEEANQKKLEF-------------AFANSDYLALLRAYKGWQ-L 1128
Query: 487 LLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLD 546
+K G +A+ +C + FLS V+ + ++ QF LL+DIG + + + K+
Sbjct: 1129 SMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFVKEGLRAREIEKRAQGGG 1188
Query: 547 SWFSDES-QMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHP 605
D + + N A + ++ A+LCA LYPNV + + +K+S A + P
Sbjct: 1189 DGILDATGEEANSNAENPKLISAMLCAALYPNVVQVK-----SPEGKFQKTSTGAVRMQP 1243
Query: 606 ----VWYDGRRE--VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILL 659
+ + + + VHIHPSS+N Q++ F+ P+LV+ EK++T++VF+RD ++VS + ++L
Sbjct: 1244 KSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIKTSRVFIRDCSMVSVYPLVL 1303
Query: 660 FGGS-INVQHQTGQVTI---DGWLKVTAPA-QTAVLFKELRLTLHSILRQMIRNP 709
FGG +NVQ Q G+ + DGW++ A + Q A L KELR L +L+ I+NP
Sbjct: 1304 FGGGQVNVQLQKGEFVVSLDDGWIRFAAASHQVAELVKELRCELDQLLQDKIKNP 1358
Score = 289 (106.8 bits), Expect = 8.7e-122, Sum P(2) = 8.7e-122
Identities = 85/235 (36%), Positives = 125/235 (53%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD L GVTH+IVDEVHER+ DFLL+VLKD++ ++ P L+VILMSAT+++ L
Sbjct: 646 LEGDTALQGVTHIIVDEVHERTEESDFLLLVLKDIVLQR-----PTLQVILMSATLNAEL 700
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CPVIT GRT PV +FLED Y L S A + SK + RR
Sbjct: 701 FSEYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYARSMKQMSKE-KLKARRS 759
Query: 126 KK---------NLVLSGWGDDSL---LSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVI 173
+ L L DS+ + ++ ++ + + + ++ + +
Sbjct: 760 RTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYQGVSKSVIKTMSVMDFEKV 819
Query: 174 DYDLLEDLV-CHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSD 223
+ +L+E L+ VD GAILVFLPG+AEI +L ++L ++ F S+
Sbjct: 820 NLELIEALLEWIVDGKHSYPPDPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSN 874
>MGI|MGI:2147067 [details] [associations]
symbol:Dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
MGI:MGI:2147067 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 HOVERGEN:HBG080658 KO:K13026
OMA:RAYKGWQ OrthoDB:EOG4ZS929 EMBL:AK035344 EMBL:AK053628
EMBL:AK162192 EMBL:BC026474 EMBL:BC062952 EMBL:BC065169
EMBL:BC066091 IPI:IPI00420351 IPI:IPI00453609 IPI:IPI00752611
IPI:IPI00753147 IPI:IPI00755243 RefSeq:NP_001157231.1
RefSeq:NP_945180.2 UniGene:Mm.12412 ProteinModelPortal:Q6P5D3
SMR:Q6P5D3 PhosphoSite:Q6P5D3 PaxDb:Q6P5D3 PRIDE:Q6P5D3
Ensembl:ENSMUST00000038166 Ensembl:ENSMUST00000086555 GeneID:106794
KEGG:mmu:106794 UCSC:uc008dqx.2 UCSC:uc008dqy.2 UCSC:uc008dqz.2
UCSC:uc008dra.2 UCSC:uc008drb.1 InParanoid:Q6P5D3 NextBio:358388
Bgee:Q6P5D3 CleanEx:MM_DHX57 Genevestigator:Q6P5D3
GermOnline:ENSMUSG00000035051 Uniprot:Q6P5D3
Length = 1388
Score = 941 (336.3 bits), Expect = 9.2e-122, Sum P(2) = 9.2e-122
Identities = 217/580 (37%), Positives = 338/580 (58%)
Query: 164 NLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSD 223
+ +++N ++I+ LLE +V GA+LVFLPG+AEI +L ++L ++ F S
Sbjct: 824 DFEKVNLELIEA-LLEWIV-DGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSH 881
Query: 224 WLLA--LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
+ LHSS++S +Q+ VF++PP + K+II+TNIAETSITIDDVVYV D G+ KE RY
Sbjct: 882 RCVIHPLHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 941
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
++ K + S+ + ++S V G+C+ L+T H Y + Q+PE+QR+PL
Sbjct: 942 DAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1001
Query: 342 VELCLQIKLL---SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHL 398
+LCL+IK+L S ++ S+ +EPP +++ + L ++GA+ DE+LTPLG+HL
Sbjct: 1002 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHL 1061
Query: 399 AKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKL 458
A LPVDV IGK+ML G IF CL P L+I+A L++KSPF+ P D+K+ + KL
Sbjct: 1062 ASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEF----- 1116
Query: 459 EGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQ 518
+ SD+L L+ AYK WQ + K +A+ +C + FLS + + ++ Q
Sbjct: 1117 --------AFANSDYLALLCAYKGWQ-LSTKESARASYNYCRQNFLSGRTLQEMASLKRQ 1167
Query: 519 FGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNV 578
F LL+DIG + + + K+ D + N A + ++ A+LCA LYPNV
Sbjct: 1168 FTELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNV 1227
Query: 579 AA--TEQGVAGAALSNL-RKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVF 635
T +G S + R SA DG VHIHPSS+N Q++ F+ P+L++
Sbjct: 1228 VQVKTPEGKFQKTSSGVVRLQPKSAELKFVTKNDGY--VHIHPSSVNYQVRHFDSPYLLY 1285
Query: 636 LEKVETNKVFLRDTTIVSPFSILLFGGS-INVQHQTGQVTI---DGWLK-VTAPAQTAVL 690
EK++T++VF+RD ++VS + ++LFGG +NVQ Q G + DGW++ V A Q A L
Sbjct: 1286 HEKIKTSRVFIRDCSMVSVYPLVLFGGGQVNVQLQRGAFVVSLDDGWIRFVAASHQVAEL 1345
Query: 691 FKELRLTLHSILRQMIRNPQNSTIA---NNEVVKSMIQLL 727
KELR L +L+ I+NP + + ++ +++L+
Sbjct: 1346 VKELRCELDQLLQDKIKNPSMDLCSCPRGSRIISMIVKLI 1385
Score = 287 (106.1 bits), Expect = 9.2e-122, Sum P(2) = 9.2e-122
Identities = 82/232 (35%), Positives = 126/232 (54%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD L GVTH+IVDEVHER+ DFLL+VLKD++ +++ L+VILMSAT+D+ L
Sbjct: 654 LEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRAT-----LQVILMSATLDAGL 708
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSA--AAIRYEASSKSGPVNNR 123
FS+YF CPVIT GR PV +FLED Y L S +++ A K +NR
Sbjct: 709 FSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQIAKEKLKARHNR 768
Query: 124 RGKK----NLVLSGWGDDS------LLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVI 173
++ +L LS D + ++ ++ + + + ++ + +
Sbjct: 769 TAQEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGVSKSVIKTMSVMDFEKV 828
Query: 174 DYDLLEDLV-CHVD--ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSS 222
+ +L+E L+ VD GA+LVFLPG+AEI +L ++L ++ F S
Sbjct: 829 NLELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRS 880
>UNIPROTKB|F1M8G5 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
RGD:1310340 NextBio:689608 IPI:IPI00391644
Ensembl:ENSRNOT00000037714 ArrayExpress:F1M8G5 Uniprot:F1M8G5
Length = 1338
Score = 939 (335.6 bits), Expect = 1.3e-121, Sum P(2) = 1.3e-121
Identities = 221/580 (38%), Positives = 337/580 (58%)
Query: 164 NLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSD 223
+ +++N ++I+ LLE +V + GAILVFLPG+AEI +L ++L ++ F S
Sbjct: 774 DFEKVNLELIEA-LLEWIV-DGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSH 831
Query: 224 WLLA--LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
+ LHSS++S +Q+ VF++PP + K+II+TNIAETSITIDDVVYV D G+ KE RY
Sbjct: 832 RCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 891
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
++ K + S+ + ++S V G+C+ L+T H Y + Q+PE+QR+PL
Sbjct: 892 DAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 951
Query: 342 VELCLQIKLL---SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHL 398
+LCL+IK+L S ++ S+ +EPP +++ + L ++GA+ DE+LTPLG+HL
Sbjct: 952 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHL 1011
Query: 399 AKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKL 458
A LPVDV IGK+ML G IF CL P L+I+A L++KSPF+ P D+K+ + KL
Sbjct: 1012 ASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEF----- 1066
Query: 459 EGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQ 518
+ SD+L L+ AYK WQ + K +A+ +C + FLS + + ++ Q
Sbjct: 1067 --------AFANSDYLALLCAYKGWQ-LSTKESARASYNYCRQNFLSGRTLQEMASLKRQ 1117
Query: 519 FGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNV 578
F LL+DIG + + + K+ D + N A + ++ A+LCA LYPNV
Sbjct: 1118 FTELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNV 1177
Query: 579 AA--TEQGVAGAALSNL-RKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVF 635
T +G S + R SA DG VHIHPSS+N Q++ F+ P+L++
Sbjct: 1178 VQVKTPEGKFQKTSSGVVRLQPKSAELKFVTKNDGY--VHIHPSSVNYQVRHFDSPYLLY 1235
Query: 636 LEKVETNKVFLRDTTIVSPFSILLFGGS-INVQHQTGQVTI---DGWLK-VTAPAQTAVL 690
EK++T++VF+RD ++VS + ++LFGG ++VQ Q G + DGW++ V A Q A L
Sbjct: 1236 HEKIKTSRVFIRDCSMVSVYPLVLFGGGQVSVQLQRGAFVVSLDDGWIRFVAASHQVAEL 1295
Query: 691 FKELRLTLHSILRQMIRNPQNS--TIANNEVVKSMIQLLL 728
KELR L +L+ I+NP T + SMI L+
Sbjct: 1296 VKELRCELDQLLQDKIKNPSMDLCTCPRGSRIISMIVKLI 1335
Score = 283 (104.7 bits), Expect = 1.3e-121, Sum P(2) = 1.3e-121
Identities = 81/232 (34%), Positives = 127/232 (54%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD L GVTH+IVDEVHER+ DFLL+VLKD++ +++ L+VILMSAT+D+ L
Sbjct: 604 LEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRAT-----LQVILMSATLDAGL 658
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSA--AAIRYEASSKSGPVNNR 123
FS+YF CPVIT GR PV +FLED Y L S +++ A + +NR
Sbjct: 659 FSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQIAKERLKARHNR 718
Query: 124 RG----KKNLVLSGWGDDS------LLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVI 173
+++L L+ D + ++ ++ + + + ++ + +
Sbjct: 719 TALEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQLLVRYKGVSKSVIKTMSVMDFEKV 778
Query: 174 DYDLLEDLV-CHVD--ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSS 222
+ +L+E L+ VD + GAILVFLPG+AEI +L ++L ++ F S
Sbjct: 779 NLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRS 830
>UNIPROTKB|F1LSC4 [details] [associations]
symbol:Dhx57 "Protein Dhx57" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR009060
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00642
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103 PROSITE:PS51194
SMART:SM00356 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 SMART:SM00165
PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026 OMA:RAYKGWQ
IPI:IPI00369334 RefSeq:NP_001178836.1 UniGene:Rn.15951
Ensembl:ENSRNOT00000037705 GeneID:366532 KEGG:rno:366532
RGD:1310340 NextBio:689608 ArrayExpress:F1LSC4 Uniprot:F1LSC4
Length = 1391
Score = 939 (335.6 bits), Expect = 4.4e-121, Sum P(2) = 4.4e-121
Identities = 221/580 (38%), Positives = 337/580 (58%)
Query: 164 NLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSD 223
+ +++N ++I+ LLE +V + GAILVFLPG+AEI +L ++L ++ F S
Sbjct: 827 DFEKVNLELIEA-LLEWIV-DGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSH 884
Query: 224 WLLA--LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
+ LHSS++S +Q+ VF++PP + K+II+TNIAETSITIDDVVYV D G+ KE RY
Sbjct: 885 RCVIHPLHSSLSSEEQQAVFVKPPLGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRY 944
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
++ K + S+ + ++S V G+C+ L+T H Y + Q+PE+QR+PL
Sbjct: 945 DAGKGMESLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPL 1004
Query: 342 VELCLQIKLL---SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHL 398
+LCL+IK+L S ++ S+ +EPP +++ + L ++GA+ DE+LTPLG+HL
Sbjct: 1005 EQLCLRIKILEMFSTHNLQSVFSRLIEPPHVDSLRASKVRLRDLGALTPDEKLTPLGYHL 1064
Query: 399 AKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKL 458
A LPVDV IGK+ML G IF CL P L+I+A L++KSPF+ P D+K+ + KL
Sbjct: 1065 ASLPVDVRIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEF----- 1119
Query: 459 EGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQ 518
+ SD+L L+ AYK WQ + K +A+ +C + FLS + + ++ Q
Sbjct: 1120 --------AFANSDYLALLCAYKGWQ-LSTKESARASYNYCRQNFLSGRTLQEMASLKRQ 1170
Query: 519 FGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNV 578
F LL+DIG + + + K+ D + N A + ++ A+LCA LYPNV
Sbjct: 1171 FTELLSDIGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNV 1230
Query: 579 AA--TEQGVAGAALSNL-RKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVF 635
T +G S + R SA DG VHIHPSS+N Q++ F+ P+L++
Sbjct: 1231 VQVKTPEGKFQKTSSGVVRLQPKSAELKFVTKNDGY--VHIHPSSVNYQVRHFDSPYLLY 1288
Query: 636 LEKVETNKVFLRDTTIVSPFSILLFGGS-INVQHQTGQVTI---DGWLK-VTAPAQTAVL 690
EK++T++VF+RD ++VS + ++LFGG ++VQ Q G + DGW++ V A Q A L
Sbjct: 1289 HEKIKTSRVFIRDCSMVSVYPLVLFGGGQVSVQLQRGAFVVSLDDGWIRFVAASHQVAEL 1348
Query: 691 FKELRLTLHSILRQMIRNPQNS--TIANNEVVKSMIQLLL 728
KELR L +L+ I+NP T + SMI L+
Sbjct: 1349 VKELRCELDQLLQDKIKNPSMDLCTCPRGSRIISMIVKLI 1388
Score = 283 (104.7 bits), Expect = 4.4e-121, Sum P(2) = 4.4e-121
Identities = 81/232 (34%), Positives = 127/232 (54%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD L GVTH+IVDEVHER+ DFLL+VLKD++ +++ L+VILMSAT+D+ L
Sbjct: 657 LEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRAT-----LQVILMSATLDAGL 711
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSA--AAIRYEASSKSGPVNNR 123
FS+YF CPVIT GR PV +FLED Y L S +++ A + +NR
Sbjct: 712 FSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQIAKERLKARHNR 771
Query: 124 RG----KKNLVLSGWGDDS------LLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVI 173
+++L L+ D + ++ ++ + + + ++ + +
Sbjct: 772 TALEEVEEDLRLALHLQDEEESVKDTIPDQQLDFKQLLVRYKGVSKSVIKTMSVMDFEKV 831
Query: 174 DYDLLEDLV-CHVD--ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSS 222
+ +L+E L+ VD + GAILVFLPG+AEI +L ++L ++ F S
Sbjct: 832 NLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRS 883
>ZFIN|ZDB-GENE-030131-4078 [details] [associations]
symbol:dhx57 "DEAH (Asp-Glu-Ala-Asp/His) box
polypeptide 57" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-030131-4078 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257
EMBL:BX248102 EMBL:AL935288 EMBL:CT998560 IPI:IPI00513320
Ensembl:ENSDART00000080351 ArrayExpress:F1QCB1 Bgee:F1QCB1
Uniprot:F1QCB1
Length = 1430
Score = 936 (334.5 bits), Expect = 5.1e-119, Sum P(2) = 5.1e-119
Identities = 220/607 (36%), Positives = 342/607 (56%)
Query: 137 DSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILV 196
D LS++ + +L ++N D+++ LLE +V D + GA+LV
Sbjct: 838 DQQLSQQDLTVRYSNYSKSVVKTLAAMDLDKINMDLVE-SLLEWIV-DGDHSYPPGAVLV 895
Query: 197 FLPGVAEIHILLDRLAASYRFGGPSSDWLLA--LHSSVASVDQKKVFLRPPEKIRKVIIA 254
FLPG+AEI L ++L ++ F ++ + LHSS+++ +Q+ VF RP + K+II+
Sbjct: 896 FLPGLAEIKQLYEQLQSNRMFNNRRTNRCVVYPLHSSLSNEEQQAVFTRPQNGVTKIIIS 955
Query: 255 TNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGI 314
TNIAETS+TIDDVVYV D GR KE RY++ + + S+ + W+S V G+
Sbjct: 956 TNIAETSVTIDDVVYVIDSGRMKEKRYDASRSMESLEDVWVSRANALQRKGRAGRVASGV 1015
Query: 315 CYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGR---IKIFLSKALEPPKEEA 371
C+ L+T HR+E + Q+PE+QR+PL +LCL++K+L + + S+ +EPP E +
Sbjct: 1016 CFHLFTSHRFEHHLSQQQLPEIQRVPLEQLCLRVKVLEVFAERPLDSVFSQLIEPPTEGS 1075
Query: 372 ITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLS 431
+ A L +GA+ +E LTPLG HLA LPVDV IGK+ML G IF CL P L+I+A L+
Sbjct: 1076 LEAAKQRLCALGALTDEESLTPLGWHLACLPVDVRIGKLMLLGAIFRCLDPALTIAASLA 1135
Query: 432 YKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRG 491
+KSPF+ P D+++ KLA S SDHL LM AYK W + G
Sbjct: 1136 FKSPFVSPWDKREEANEKKLAF-------------SLANSDHLALMQAYKGWCNAA-QSG 1181
Query: 492 TKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDD-LDSWFS 550
KA Q+C + FLS + I ++ QF LL+DIG + K + K D
Sbjct: 1182 FKAGYQYCRENFLSIRGLQEIACLKRQFAELLSDIGFVKDGLKARVIEKMSSKGSDGVLE 1241
Query: 551 DESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDG 610
N+ ++++ ++ A+LCA LYPNV L++ + + KA +
Sbjct: 1242 ATGYEANLNSDNTKLMSAMLCAALYPNVVQVRSPQMKYKLTS-KGAMKMQPKAEEQRFMT 1300
Query: 611 RRE--VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGS-INVQ 667
+ + VHIHPSS+N ++ ++ P+LV+ EKV+T++VF+RD ++V + ++LFGG +NV+
Sbjct: 1301 KSDGAVHIHPSSVNFSVRHYDSPYLVYHEKVKTSRVFIRDCSMVCVYPMVLFGGGQVNVE 1360
Query: 668 HQTGQVTI---DGWLKVTAPA-QTAVLFKELRLTLHSILRQMIRNPQNSTIA---NNEVV 720
Q GQ I DGW+K A + + A L KELR L +L + I+NP I+ + ++
Sbjct: 1361 LQRGQFIISLDDGWIKFAAASHEVAELVKELRWELDQLLEEKIKNPSMDLISCPRGSRII 1420
Query: 721 KSMIQLL 727
+++ L+
Sbjct: 1421 HTIVSLI 1427
Score = 269 (99.8 bits), Expect = 5.1e-119, Sum P(2) = 5.1e-119
Identities = 61/132 (46%), Positives = 81/132 (61%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD L+GVTHVIVDEVHER+ DFLL+VLKDL+ K++ LKVI+MSAT+++ L
Sbjct: 692 LEGDPELSGVTHVIVDEVHERTEESDFLLLVLKDLIVKRT-----DLKVIMMSATLNAEL 746
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS+YF +CP I GRT PV +FLED Y + S + + SGP G
Sbjct: 747 FSQYFNNCPCIHIPGRTFPVEQFFLEDAIAKTRYVIEDGSPYRRSTKLNRSSGP-GGTTG 805
Query: 126 KKNLVLSGWGDD 137
K ++ + DD
Sbjct: 806 KGRALVEDFDDD 817
>UNIPROTKB|Q6P158 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR009060 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS00690 PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0046872
GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
EMBL:AC018693 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
SUPFAM:SSF46934 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AK057423 EMBL:BC053623 EMBL:BC060778
EMBL:BC065278 EMBL:BC131534 EMBL:AF283512 IPI:IPI00168885
IPI:IPI00399364 IPI:IPI00749029 RefSeq:NP_945314.1
UniGene:Hs.468226 ProteinModelPortal:Q6P158 SMR:Q6P158
IntAct:Q6P158 STRING:Q6P158 PhosphoSite:Q6P158 DMDM:94710252
PaxDb:Q6P158 PeptideAtlas:Q6P158 PRIDE:Q6P158
Ensembl:ENST00000295373 GeneID:90957 KEGG:hsa:90957 UCSC:uc002rre.3
UCSC:uc002rrg.3 CTD:90957 GeneCards:GC02M039025 HGNC:HGNC:20086
HPA:HPA036160 neXtProt:NX_Q6P158 PharmGKB:PA134919698
HOVERGEN:HBG080658 InParanoid:Q6P158 KO:K13026 OMA:RAYKGWQ
OrthoDB:EOG4ZS929 PhylomeDB:Q6P158 ChiTaRS:DHX57 GenomeRNAi:90957
NextBio:77048 ArrayExpress:Q6P158 Bgee:Q6P158 CleanEx:HS_DHX57
Genevestigator:Q6P158 GermOnline:ENSG00000163214 Uniprot:Q6P158
Length = 1386
Score = 1169 (416.6 bits), Expect = 9.8e-119, P = 9.8e-119
Identities = 279/731 (38%), Positives = 424/731 (58%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD L GV+H+IVDEVHER+ DFLL+VLKD++ ++ P L+VILMSAT+++ L
Sbjct: 653 LEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQR-----PGLQVILMSATLNAEL 707
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSA--AAIRYEASSKSGPVNNR 123
FS YF CPVIT GRT PV +FLED Y L S +++ + K NR
Sbjct: 708 FSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNR 767
Query: 124 RG----KKNLVLSGW--GDDSL---LSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVID 174
+++L LS DS+ + ++ ++ + + + ++ + ++
Sbjct: 768 TAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVN 827
Query: 175 YDLLEDLV-CHVD--ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA--LH 229
+L+E L+ VD + GAILVFLPG+AEI +L ++L ++ F S+ + LH
Sbjct: 828 LELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLH 887
Query: 230 SSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSS 289
SS++S +Q+ VF++PP + K+II+TNIAETSITIDDVVYV D G+ KE RY++ K + S
Sbjct: 888 SSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 947
Query: 290 MVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIK 349
+ + ++S V G+C+ L+T H Y + Q+PE+QR+PL +LCL+IK
Sbjct: 948 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIK 1007
Query: 350 LL---SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
+L S ++ S+ +EPP +++ + L ++GA+ DE LTPLG+HLA LPVDV
Sbjct: 1008 ILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDVR 1067
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
IGK+MLFG IF CL P L+I+A L++KSPF+ P D+K+ + KL
Sbjct: 1068 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEF------------- 1114
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
+ SD+L L+ AYK WQ + K G +A+ +C + FLS V+ + ++ QF LL+DI
Sbjct: 1115 AFANSDYLALLQAYKGWQ-LSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1173
Query: 527 GLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATE--QG 584
G + + K+ D + N A + ++ A+LCA LYPNV + +G
Sbjct: 1174 GFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPEG 1233
Query: 585 -VAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNK 643
+ +R SA DG VHIHPSS+N Q++ F+ P+L++ EK++T++
Sbjct: 1234 KFQKTSTGAVRMQPKSAELKFVTKNDGY--VHIHPSSVNYQVRHFDSPYLLYHEKIKTSR 1291
Query: 644 VFLRDTTIVSPFSILLFGGS-INVQHQTGQVTI---DGWLK-VTAPAQTAVLFKELRLTL 698
VF+RD ++VS + ++LFGG +NVQ Q G+ + DGW++ V A Q A L KELR L
Sbjct: 1292 VFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCEL 1351
Query: 699 HSILRQMIRNP 709
+L+ I+NP
Sbjct: 1352 DQLLQDKIKNP 1362
>UNIPROTKB|E1C9G0 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000571 InterPro:IPR001650
InterPro:IPR006575 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00642 Pfam:PF04408 Pfam:PF05773
PROSITE:PS50103 PROSITE:PS51194 SMART:SM00356 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:RAYKGWQ
EMBL:AADN02041257 EMBL:AADN02041258 EMBL:AADN02041259
EMBL:AADN02041260 IPI:IPI00679513 Ensembl:ENSGALT00000023376
Uniprot:E1C9G0
Length = 1380
Score = 1165 (415.2 bits), Expect = 2.6e-118, P = 2.6e-118
Identities = 279/735 (37%), Positives = 429/735 (58%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD L G+THVIVDEVHER+ DFLL+VLKD++ ++ P L++ILMSAT+++ L
Sbjct: 646 LEGDLTLQGITHVIVDEVHERTEESDFLLLVLKDIMVQR-----PDLRIILMSATLNAEL 700
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS+YF CP+I GRT PV +FLEDV Y L S + + +K + R
Sbjct: 701 FSQYFHSCPIINIPGRTFPVDQFFLEDVIAMTRYVLEDSSPYRRKTKQENKVTARHKRTA 760
Query: 126 ----KKNLVLSGWGDDSLLS------EEYINXXXXXXXXXXXXEQT-RQNLKRLNEDVID 174
+++L +G +D+ + ++ +N +T + + ++ D ++
Sbjct: 761 FEEVEEDLRHAGLLEDTDTAVKDSDPDQKMNLTVLFLSFSSGVNKTVLKTMSVMDLDKVN 820
Query: 175 YDLLEDLV-CHVD--ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA--LH 229
+L+E L+ VD + GA+L+FLPG+AEI +L ++L ++ F S + LH
Sbjct: 821 LELIEALLEWIVDGKHSYPPGAVLIFLPGLAEIKMLYEQLQSNALFNNRHSKRCVVYPLH 880
Query: 230 SSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSS 289
SS++S +Q+ VFLRPP + K+II+TNIAETS+TIDDVVYV D G+ KE RY+ K + S
Sbjct: 881 SSLSSEEQQSVFLRPPAGVIKIIISTNIAETSVTIDDVVYVIDSGKMKEKRYDPSKGMES 940
Query: 290 MVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIK 349
+ + ++S V G+C+ L++ H Y + Q+PE+QR+PL +LCL+IK
Sbjct: 941 LEDTFVSRANALQRKGRAGRVASGVCFHLFSSHHYNHQLIKQQLPEIQRVPLEQLCLRIK 1000
Query: 350 LL---SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
+L S + LS+ +EPP+ E++ + L ++GA+ DE+LTPLG+HLA LPVDV
Sbjct: 1001 ILEMFSAQSLHSVLSRLIEPPRTESLRASKLRLQDLGALTADEKLTPLGYHLASLPVDVR 1060
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
IGK+MLFG IF CL P L+I+A L++KSPF+ P D+++ + KL D G
Sbjct: 1061 IGKLMLFGTIFRCLDPALTIAASLAFKSPFVSPWDKREEANKKKL----DFAVG------ 1110
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
SD+L L+ AYK W ++ K G++A+ +C + FLS V+ I ++ QF LL+DI
Sbjct: 1111 ---NSDYLALLQAYKGW-RLSTKEGSQASYNYCRENFLSGRVLQEIASLKRQFTELLSDI 1166
Query: 527 GLINLPNKNQTGGKK-KDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGV 585
G + + + +K D + N A + ++ A+LCA LYPNV ++
Sbjct: 1167 GFVKEGLRARDIERKWSQGGDGVLDATGEEANSNAENFKLISAMLCAALYPNVVQVKKPE 1226
Query: 586 AGAALSNLRKSSNSAAKAHP----VWYDGRRE--VHIHPSSINSQLKSFEHPFLVFLEKV 639
+K+S A K P + + + + VHIHPSS+N Q + FE P+LV+ EK+
Sbjct: 1227 G-----KYQKTSTGAVKMQPKAEELKFVTKNDGYVHIHPSSVNYQTRHFESPYLVYHEKI 1281
Query: 640 ETNKVFLRDTTIVSPFS-ILLFGGSINVQHQTGQVTI---DGWLK-VTAPAQTAVLFKEL 694
+T++VF+RD ++VS + +LL GG +++Q Q G+ I DGW++ V A Q A L KEL
Sbjct: 1282 KTSRVFIRDCSMVSVYPLVLLGGGQVHMQLQKGEFVISLDDGWIRFVAASHQVAELVKEL 1341
Query: 695 RLTLHSILRQMIRNP 709
R L +L+ I+NP
Sbjct: 1342 RCELDQLLQDKIKNP 1356
>UNIPROTKB|E2QX71 [details] [associations]
symbol:DHX57 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000571
InterPro:IPR001650 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00356 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0008270 GO:GO:0003676 InterPro:IPR015940
SMART:SM00165 PROSITE:PS50030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00550000074257 CTD:90957 KO:K13026
OMA:RAYKGWQ EMBL:AAEX03010868 RefSeq:XP_540155.1
Ensembl:ENSCAFT00000010087 GeneID:483040 KEGG:cfa:483040
Uniprot:E2QX71
Length = 1382
Score = 1163 (414.5 bits), Expect = 4.2e-118, P = 4.2e-118
Identities = 275/734 (37%), Positives = 429/734 (58%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD +L GVTH+IVDEVHER+ DFLL+VLKD++ ++ P L+VILMSAT+++ L
Sbjct: 649 LEGDTSLQGVTHIIVDEVHERTEESDFLLLVLKDIVLQR-----PNLQVILMSATLNAEL 703
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSA--AAIRYEASSKSGPVNNR 123
FS YF CPVIT GRT PV +FLED Y L S +++ K +R
Sbjct: 704 FSEYFSSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQDGSPYMRSMKQMTKEKLKARRSR 763
Query: 124 RG----KKNLVLSGW--GDDSL---LSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVID 174
+++L LS DS+ + ++ ++ + + + ++ + ++
Sbjct: 764 TAFEEVEEDLRLSLHLQHQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVN 823
Query: 175 YDLLEDLV-CHVD--ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA--LH 229
+L+E L+ VD + GAILVFLPG+AEI +L ++L ++ F S + LH
Sbjct: 824 LELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVVHPLH 883
Query: 230 SSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSS 289
SS++S +Q+ VF++PP + K+II+TNIAETSITIDDVVYV D G+ KE RY++ K + S
Sbjct: 884 SSLSSEEQQAVFVKPPVGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMES 943
Query: 290 MVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIK 349
+ + ++S V G+C+ L+T H + + Q+PE+QR+PL +LCL+IK
Sbjct: 944 LEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIK 1003
Query: 350 LL---SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
+L S ++ S+ +EPP +++ + L ++GA+ DE+LTPLG+HLA LPVDV
Sbjct: 1004 ILEMFSTHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVR 1063
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
IGK+MLFG IF CL P L+I+A L++KSPF+ P D+K+ + KL
Sbjct: 1064 IGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEF------------- 1110
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
+ SD+L L+ AYK WQ + +K G +A+ +C + FLS V+ + ++ QF LL+DI
Sbjct: 1111 AFANSDYLALLRAYKGWQ-LSMKEGMRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDI 1169
Query: 527 GLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVA 586
G + + + K+ D + N A + ++ A+LCA LYPNV +
Sbjct: 1170 GFVKEGLRAREIEKRAQGGDGILDATGEEANSNAENPKLISAMLCAALYPNVVQVK---- 1225
Query: 587 GAALSNLRKSSNSAAKAHP----VWYDGRRE--VHIHPSSINSQLKSFEHPFLVFLEKVE 640
+ +K+S A + P + + + + VHIHPSS+N Q++ F+ P+LV+ EK++
Sbjct: 1226 -SPEGKFQKTSTGAVRMQPKSDELKFVTKNDGYVHIHPSSVNYQVRHFDSPYLVYHEKIK 1284
Query: 641 TNKVFLRDTTIVSPFSILLFGGS-INVQHQTGQVTI---DGWLKVTAPA-QTAVLFKELR 695
T++VF+RD ++VS + ++LFGG ++VQ Q G+ + DGW++ A + Q A L KELR
Sbjct: 1285 TSRVFIRDCSMVSVYPLVLFGGGQVSVQLQRGEFVVSLDDGWIRFAAASHQVAELVKELR 1344
Query: 696 LTLHSILRQMIRNP 709
L +L+ I+NP
Sbjct: 1345 CELDQLLQDKIKNP 1358
>UNIPROTKB|E1B9N7 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:DAAA02050346 IPI:IPI00907457 Ensembl:ENSBTAT00000013897
ArrayExpress:E1B9N7 Uniprot:E1B9N7
Length = 1367
Score = 899 (321.5 bits), Expect = 5.0e-116, Sum P(2) = 5.0e-116
Identities = 211/546 (38%), Positives = 312/546 (57%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D LT V+HVIVDEVHERS+ DFLLI+LK++L+K+S L +ILMSATVD
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS-----DLHLILMSATVDCEK 738
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP++ GR++PV + LED+ E + L DS ++ + +N
Sbjct: 739 FSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITIN---- 794
Query: 126 KKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQ-----TRQNLKRLNEDVIDYDLLED 180
+ G +EYI Q T+ + +N I+ DL+ +
Sbjct: 795 ---VTTKAGGIKKY--QEYIPVQTGTSADLNPFYQKYSSRTQHAILYMNPHKINLDLILE 849
Query: 181 LVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVD 236
L+ ++D + EGA+L+FLPG+A I L D L+ RF ++ALHS +++ D
Sbjct: 850 LLTYLDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALHSILSTQD 908
Query: 237 QKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWIS 296
Q F PP+ +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE ++S
Sbjct: 909 QAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVS 968
Query: 297 XXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRI 356
V+ G C+ +YTR R+E M Y VPE+ R+PL ELCL I +LG
Sbjct: 969 KASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCLHIMKCNLGSP 1027
Query: 357 KIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMMLFGG 415
+ FLSKAL+PP+ + I+ A+++L ++GA E +E +LTPLG HLA LPV+V IGKM++FG
Sbjct: 1028 EDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGA 1087
Query: 416 IFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLV 475
IFGCL P+ +++A ++ KSPFI P K + AK AL ++DS DHL
Sbjct: 1088 IFGCLDPVATLAAVMTEKSPFITPIGRKDEADLAKSAL------AMADS-------DHLT 1134
Query: 476 LMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKN 535
+ AY W+K + G ++ +C K FL+ + + + D++ + L+ G ++ N
Sbjct: 1135 IYNAYLGWKKARQEGGYRSEIAYCRKNFLNRTSLLTLEDVKQELIKLVKAAGFLSSTTSN 1194
Query: 536 QTGGKK 541
G +
Sbjct: 1195 SFEGNR 1200
Score = 277 (102.6 bits), Expect = 5.0e-116, Sum P(2) = 5.0e-116
Identities = 58/168 (34%), Positives = 106/168 (63%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 623
+++KA+L AGLY NV G + KS + K + + + +HPSS+N
Sbjct: 1211 ALLKAVLTAGLYDNV--------GKIIYT--KSVDITEKLACIVETAQGKAQVHPSSVNR 1260
Query: 624 QLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTA 683
L+ + +L++ EK+ +V+LR+TT+++PF +LLFGG I VQH+ +++DGW+ A
Sbjct: 1261 DLQIYG--WLLYQEKIRYARVYLRETTLITPFPVLLFGGDIEVQHRERLISVDGWIYFQA 1318
Query: 684 PAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEED 731
P + AV+FK+LR+ + S+LR+ + NP+ S + N+++++ + +L+ E+
Sbjct: 1319 PVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITELIKTEN 1365
>UNIPROTKB|E2RID8 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:54505
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437 RefSeq:XP_535238.2
Ensembl:ENSCAFT00000010821 GeneID:478060 KEGG:cfa:478060
NextBio:20853441 Uniprot:E2RID8
Length = 1367
Score = 887 (317.3 bits), Expect = 3.4e-115, Sum P(2) = 3.4e-115
Identities = 211/540 (39%), Positives = 309/540 (57%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D LT V+HVIVDEVHERS+ DFLLI+LK++L+K+S L +ILMSATVDS
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS-----DLHLILMSATVDSEK 738
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP++ GR++PV + LED+ E + L DS ++ + +N
Sbjct: 739 FSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITIN---- 794
Query: 126 KKNLVLSGWGDDSLLSEEYI--NXXXXXXXX---XXXXEQTRQNLKRLNEDVIDYDLLED 180
V S G +EYI N +T+ + +N I+ DL+ +
Sbjct: 795 ----VTSKAGGIKK-HQEYIPVNTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILE 849
Query: 181 LVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVD 236
L+ ++D + EGA+L+FLPG+A I L D L+ RF ++ALHS +++ D
Sbjct: 850 LLIYLDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALHSILSTQD 908
Query: 237 QKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWIS 296
Q F PP +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE ++S
Sbjct: 909 QAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVS 968
Query: 297 XXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRI 356
V+ G C+ +YTR R+E M Y VPE+ R+PL ELCL I +LG
Sbjct: 969 KASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCLHIMKCNLGSP 1027
Query: 357 KIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE-LTPLGHHLAKLPVDVLIGKMMLFGG 415
+ FLSKAL+PP+ + I+ A+++L ++GA E +E LTPLG HLA LPV+V IGKM++FG
Sbjct: 1028 EDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLIFGA 1087
Query: 416 IFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLV 475
IFGCL P+ +++A ++ KSPF P K + AK AL ++DS DHL
Sbjct: 1088 IFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSAL------AMADS-------DHLT 1134
Query: 476 LMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKN 535
+ AY W+K + G ++ +C + FL+ + + + D++ + L+ G + N
Sbjct: 1135 IYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSTTSN 1194
Score = 282 (104.3 bits), Expect = 3.4e-115, Sum P(2) = 3.4e-115
Identities = 59/168 (35%), Positives = 107/168 (63%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 623
+++KA+L AGLY NV G + KS + K + + + +HPSS+N
Sbjct: 1211 ALLKAVLAAGLYDNV--------GKIIYT--KSVDVTEKLACIVETAQGKAQVHPSSVNR 1260
Query: 624 QLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTA 683
L+++ +L++ EKV +V+LR+TT+++PF +LLFGG I VQH+ +++DGW+ A
Sbjct: 1261 DLQTYG--WLLYQEKVRYTRVYLRETTLITPFPVLLFGGDIEVQHRERLLSVDGWIYFQA 1318
Query: 684 PAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEED 731
P + AV+FK+LR+ + S+LR+ + NP+ S + N+++++ + +L+ E+
Sbjct: 1319 PVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITELIKTEN 1365
>MGI|MGI:2145374 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2145374
GO:GO:0005739 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 HOGENOM:HOG000247063
HOVERGEN:HBG081436 OMA:WLLYQEK OrthoDB:EOG43FGW2 EMBL:BC057112
EMBL:BC082319 EMBL:AK028342 EMBL:AK042066 EMBL:AK042497
EMBL:AK049530 IPI:IPI00410936 RefSeq:NP_766182.2 UniGene:Mm.35094
ProteinModelPortal:Q6PGC1 SMR:Q6PGC1 STRING:Q6PGC1
PhosphoSite:Q6PGC1 PaxDb:Q6PGC1 PRIDE:Q6PGC1
Ensembl:ENSMUST00000038574 GeneID:218629 KEGG:mmu:218629
UCSC:uc007rwx.1 GeneTree:ENSGT00550000074257 InParanoid:Q6PGC1
NextBio:376359 Bgee:Q6PGC1 CleanEx:MM_DHX29 Genevestigator:Q6PGC1
GermOnline:ENSMUSG00000042426 Uniprot:Q6PGC1
Length = 1365
Score = 892 (319.1 bits), Expect = 3.8e-115, Sum P(2) = 3.8e-115
Identities = 208/538 (38%), Positives = 313/538 (58%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D L V+HVIVDEVHERS+ DFLL++LK++L+K+S L +ILMSATVDS+
Sbjct: 686 LQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS-----DLHLILMSATVDSDK 740
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP++ GR++PV + LED+ E + L DS ++ + +N
Sbjct: 741 FSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITIN---- 796
Query: 126 KKNLVLSGWGDDSLLSEEYINXXXXXX-----XXXXXXEQTRQNLKRLNEDVIDYDLLED 180
V S G +EYI +T+ + +N I+ DL+ +
Sbjct: 797 ----VTSKAGGVKKY-QEYIPVQSGASPELNPFYQKYSSRTQHAILYMNPHKINLDLILE 851
Query: 181 LVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVD 236
L+ ++D++ EGA+L+FLPG+A I L D L++ RF ++ALHS +++ D
Sbjct: 852 LLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQ-VIALHSVLSTQD 910
Query: 237 QKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWIS 296
Q F+ PP +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE ++S
Sbjct: 911 QAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVS 970
Query: 297 XXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRI 356
V+ G C+ LYTR R+E + Y VPE+ R+PL ELCL I LG
Sbjct: 971 KASALQRQGRAGRVRDGFCFRLYTRERFEGFL-DYSVPEILRVPLEELCLHIMKCDLGSP 1029
Query: 357 KIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMMLFGG 415
+ FLSKAL+PP+ + I+ A+++L ++GA E +E +LTPLG HLA LPV+V IGKM++FG
Sbjct: 1030 EDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKMLIFGA 1089
Query: 416 IFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLV 475
IFGCL P+ +++A ++ KSPFI P K + AK +L ++DS DHL
Sbjct: 1090 IFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSL------AVADS-------DHLT 1136
Query: 476 LMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPN 533
+ AY W+K + G ++ +C + FL+ + + + D++ + L+ G + P+
Sbjct: 1137 IYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSSPS 1194
Score = 276 (102.2 bits), Expect = 3.8e-115, Sum P(2) = 3.8e-115
Identities = 58/168 (34%), Positives = 107/168 (63%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 623
+++KA+L AGLY +V G + KS + K + + + +HPSS+N
Sbjct: 1210 ALLKAVLAAGLYDSV--------GKIMCT--KSVDVTEKLACMVETAQGKAQVHPSSVNR 1259
Query: 624 QLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTA 683
L+++ +L++ EKV +V+LR+TT+++PF +LLFGG I VQH+ +++DGW+ A
Sbjct: 1260 DLQTYG--WLLYQEKVRYTRVYLRETTLITPFPVLLFGGDIEVQHRERLLSVDGWIYFQA 1317
Query: 684 PAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEED 731
P + AV+FK+LR+ + S+LR+ + NP+ S + N+++++ + +L+ E+
Sbjct: 1318 PVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITELIKTEN 1364
>UNIPROTKB|I3LG95 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000030291 Uniprot:I3LG95
Length = 1370
Score = 883 (315.9 bits), Expect = 7.7e-115, Sum P(2) = 7.7e-115
Identities = 209/532 (39%), Positives = 307/532 (57%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D LT V+HVIVDEVHERS+ DFLLI+LK++L+K+S L +ILMSATVDS
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS-----DLHLILMSATVDSEK 738
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP++ GR++PV + LED+ E + L DS ++ + +N
Sbjct: 739 FSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITIN---- 794
Query: 126 KKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQ-----TRQNLKRLNEDVIDYDLLED 180
V S G +EYI Q T+ + +N I+ DL+ +
Sbjct: 795 ----VTSKAGGIKKY-QEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILE 849
Query: 181 LVCHVDETCG-------EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVA 233
L+ +++ T EGA+L+FLPG+A I L D L+ RF ++ALHS ++
Sbjct: 850 LLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALHSILS 908
Query: 234 SVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVED 293
+ DQ F PP+ +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE
Sbjct: 909 TQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVET 968
Query: 294 WISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSL 353
++S V+ G C+ +YTR R+E M Y VPE+ R+PL ELCL I +L
Sbjct: 969 FVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCLHIMKCNL 1027
Query: 354 GRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMML 412
G + FLSKAL+PP+ + I+ A+ +L ++GA E +E +LTPLG HLA LPV+V IGKM++
Sbjct: 1028 GSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLI 1087
Query: 413 FGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
FG IFGCL P+ +++A ++ KSPF P K + AK AL ++DS D
Sbjct: 1088 FGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSAL------AMADS-------D 1134
Query: 473 HLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLA 524
HL + AY W+K + G ++ +C + FL+ + + + ++++ F +A
Sbjct: 1135 HLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKVSFPETIA 1186
Score = 283 (104.7 bits), Expect = 7.7e-115, Sum P(2) = 7.7e-115
Identities = 59/168 (35%), Positives = 108/168 (64%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 623
+++KA+L AGLY NV G + KS + K + + + +HPSS+N
Sbjct: 1214 ALLKAVLTAGLYDNV--------GKIIYT--KSVDVTEKLACIVETAQGKAQVHPSSVNR 1263
Query: 624 QLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTA 683
L+++ +L++ EK+ +V+LR+TT+++PFS+LLFGG I VQH+ +++DGW+ A
Sbjct: 1264 DLQTYG--WLLYQEKIRYARVYLRETTLITPFSVLLFGGDIEVQHRERLLSVDGWIYFQA 1321
Query: 684 PAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEED 731
P + AV+FK+LR+ + S+LR+ + NP+ S + N+++++ + +L+ E+
Sbjct: 1322 PVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITELIKTEN 1368
>UNIPROTKB|Q7Z478 [details] [associations]
symbol:DHX29 "ATP-dependent RNA helicase DHX29"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005739
GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AY036974 EMBL:BC056219 EMBL:AL834496
EMBL:BX648101 EMBL:BX648269 EMBL:AL079292 EMBL:AF070639
IPI:IPI00217413 RefSeq:NP_061903.2 UniGene:Hs.740463
ProteinModelPortal:Q7Z478 SMR:Q7Z478 IntAct:Q7Z478
MINT:MINT-1376685 STRING:Q7Z478 PhosphoSite:Q7Z478 DMDM:110278938
PaxDb:Q7Z478 PeptideAtlas:Q7Z478 PRIDE:Q7Z478
Ensembl:ENST00000251636 GeneID:54505 KEGG:hsa:54505 UCSC:uc003jpx.3
CTD:54505 GeneCards:GC05M054552 H-InvDB:HIX0004866 HGNC:HGNC:15815
HPA:HPA038317 HPA:HPA038318 MIM:612720 neXtProt:NX_Q7Z478
PharmGKB:PA27215 HOGENOM:HOG000247063 HOVERGEN:HBG081436
InParanoid:Q7Z478 OMA:WLLYQEK OrthoDB:EOG43FGW2 PhylomeDB:Q7Z478
ChiTaRS:DHX29 GenomeRNAi:54505 NextBio:56869 Bgee:Q7Z478
CleanEx:HS_DHX29 Genevestigator:Q7Z478 GermOnline:ENSG00000067248
Uniprot:Q7Z478
Length = 1369
Score = 881 (315.2 bits), Expect = 7.8e-115, Sum P(2) = 7.8e-115
Identities = 209/532 (39%), Positives = 308/532 (57%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D L+ V+HVIVDEVHERS+ DFLLI+LK++L+K+S L +ILMSATVDS
Sbjct: 687 LQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRS-----DLHLILMSATVDSEK 741
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP++ GR++PV + LED+ E + L DS ++ + +N
Sbjct: 742 FSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTIN---- 797
Query: 126 KKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQ-----TRQNLKRLNEDVIDYDLLED 180
V S G +EYI Q T+ + +N I+ DL+ +
Sbjct: 798 ----VTSKAGGIKKY-QEYIPVQTGAHADLNPFYQKYSSRTQHAILYMNPHKINLDLILE 852
Query: 181 LVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVD 236
L+ ++D++ EGA+L+FLPG+A I L D L+ RF ++ALHS +++ D
Sbjct: 853 LLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYK-VIALHSILSTQD 911
Query: 237 QKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWIS 296
Q F PP +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE ++S
Sbjct: 912 QAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFVS 971
Query: 297 XXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRI 356
V+ G C+ +YTR R+E M Y VPE+ R+PL ELCL I +LG
Sbjct: 972 KASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCLHIMKCNLGSP 1030
Query: 357 KIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMMLFGG 415
+ FLSKAL+PP+ + I+ A+++L ++GA E +E +LTPLG HLA LPV+V IGKM++FG
Sbjct: 1031 EDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLIFGA 1090
Query: 416 IFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLV 475
IFGCL P+ +++A ++ KSPF P K + AK AL ++DS DHL
Sbjct: 1091 IFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSAL------AMADS-------DHLT 1137
Query: 476 LMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIG 527
+ AY W+K + G ++ +C + FL+ + + + D++ + L+ G
Sbjct: 1138 IYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAG 1189
Score = 285 (105.4 bits), Expect = 7.8e-115, Sum P(2) = 7.8e-115
Identities = 62/185 (33%), Positives = 112/185 (60%)
Query: 547 SWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPV 606
SW + + + +++KA+L AGLY NV G + KS + K +
Sbjct: 1198 SWEGNRASQ-TLSFQEIALLKAVLVAGLYDNV--------GKIIYT--KSVDVTEKLACI 1246
Query: 607 WYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINV 666
+ + +HPSS+N L++ H +L++ EK+ +V+LR+TT+++PF +LLFGG I V
Sbjct: 1247 VETAQGKAQVHPSSVNRDLQT--HGWLLYQEKIRYARVYLRETTLITPFPVLLFGGDIEV 1304
Query: 667 QHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQL 726
QH+ ++IDGW+ AP + AV+FK+LR+ + S+LR+ + NP+ S + N+++++ + +L
Sbjct: 1305 QHRERLLSIDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITEL 1363
Query: 727 LLEED 731
+ E+
Sbjct: 1364 IKTEN 1368
Score = 37 (18.1 bits), Expect = 1.5e-19, Sum P(2) = 1.5e-19
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 96 SINYRLALDSAAAIRYEASSKSGP 119
++N+ L SAAA E K P
Sbjct: 338 ALNFNLFEKSAAATEEEKDKKKEP 361
>UNIPROTKB|F1SLN0 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 EMBL:CU929534
Ensembl:ENSSSCT00000018413 Uniprot:F1SLN0
Length = 1367
Score = 878 (314.1 bits), Expect = 2.1e-114, Sum P(2) = 2.1e-114
Identities = 210/531 (39%), Positives = 307/531 (57%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D LT V+HVIVDEVHERS+ DFLLI+LK++L+K+S L +ILMSATVDS
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS-----DLHLILMSATVDSEK 738
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP++ GR++PV + LED+ E + L DS ++ + +N
Sbjct: 739 FSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITIN---- 794
Query: 126 KKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQ-----TRQNLKRLNEDVIDYDLLED 180
V S G +EYI Q T+ + +N I+ DL+ +
Sbjct: 795 ----VTSKAGGIKKY-QEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILE 849
Query: 181 LVCHVDETCG-------EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVA 233
L+ +++ T EGA+L+FLPG+A I L D L+ RF ++ALHS ++
Sbjct: 850 LLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALHSILS 908
Query: 234 SVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVED 293
+ DQ F PP+ +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE
Sbjct: 909 TQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVET 968
Query: 294 WISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSL 353
++S V+ G C+ +YTR R+E M Y VPE+ R+PL ELCL I +L
Sbjct: 969 FVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCLHIMKCNL 1027
Query: 354 GRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMML 412
G + FLSKAL+PP+ + I+ A+ +L ++GA E +E +LTPLG HLA LPV+V IGKM++
Sbjct: 1028 GSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLI 1087
Query: 413 FGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
FG IFGCL P+ +++A ++ KSPF P K + AK AL ++DS D
Sbjct: 1088 FGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSAL------AMADS-------D 1134
Query: 473 HLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
HL + AY W+K + G ++ +C + FL+ + + + +++ + TLL
Sbjct: 1135 HLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLEEIKRRRTTLL 1185
Score = 284 (105.0 bits), Expect = 2.1e-114, Sum P(2) = 2.1e-114
Identities = 60/187 (32%), Positives = 114/187 (60%)
Query: 545 LDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAH 604
+ +++S + +++KA+L AGLY NV G + KS + K
Sbjct: 1192 IKTYYSSSRASQTLSFQEIALLKAVLTAGLYDNV--------GKIIYT--KSVDVTEKLA 1241
Query: 605 PVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSI 664
+ + + +HPSS+N L+++ +L++ EK+ +V+LR+TT+++PFS+LLFGG I
Sbjct: 1242 CIVETAQGKAQVHPSSVNRDLQTYG--WLLYQEKIRYARVYLRETTLITPFSVLLFGGDI 1299
Query: 665 NVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMI 724
VQH+ +++DGW+ AP + AV+FK+LR+ + S+LR+ + NP+ S + N+++++ +
Sbjct: 1300 EVQHRERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIIT 1358
Query: 725 QLLLEED 731
+L+ E+
Sbjct: 1359 ELIKTEN 1365
>RGD|2318361 [details] [associations]
symbol:Dhx29 "DEAH (Asp-Glu-Ala-His) box polypeptide 29"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:2318361
GO:GO:0005739 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OrthoDB:EOG43FGW2 GeneTree:ENSGT00550000074257
IPI:IPI00372028 Ensembl:ENSRNOT00000013854 Uniprot:D3ZHW0
Length = 1366
Score = 886 (316.9 bits), Expect = 3.0e-114, Sum P(2) = 3.0e-114
Identities = 209/533 (39%), Positives = 311/533 (58%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D L V+HVIVDEVHERS+ DFLL++LK++L+K+S L +ILMSATVDS+
Sbjct: 687 LQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS-----DLHLILMSATVDSDK 741
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVN--NR 123
FS YF CP++ GR++PV + LED+ E + L DS ++ + +N ++
Sbjct: 742 FSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFILEKDSEYCQKFLEEEEEITINVTSK 801
Query: 124 RG--KK--NLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLE 179
G KK + G LS Y +T+ + +N I+ DL+
Sbjct: 802 AGGIKKYQECIPVQSGASPELSPFY----------QKYSSRTQYAVLYMNPHKINLDLIL 851
Query: 180 DLVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASV 235
+L+ ++D++ EGA+L+FLPG+A I L D L+ RF L+ALHS +++
Sbjct: 852 ELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYQ-LIALHSVLSTQ 910
Query: 236 DQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWI 295
DQ F+ PP +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE ++
Sbjct: 911 DQAAAFMLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVETFV 970
Query: 296 SXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGR 355
S V+ G C+ LYTR R+E + Y VPE+ R+PL ELCL I LG
Sbjct: 971 SKASALQRQGRAGRVRDGFCFRLYTRERFEGFLE-YSVPEILRVPLEELCLHIMKCDLGS 1029
Query: 356 IKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMMLFG 414
+ FLSKAL+PP+ + I+ A+++L ++GA E E +LTPLG HLA LPV+V IGKM++FG
Sbjct: 1030 PEDFLSKALDPPQPQVISNAMNLLRKIGACEPSEPKLTPLGQHLAALPVNVKIGKMLIFG 1089
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHL 474
IFGCL P+ +++A ++ KSPFI P K + AK +L ++DS DHL
Sbjct: 1090 AIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSL------AVADS-------DHL 1136
Query: 475 VLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIG 527
+ AY W+K + G ++ +C + FL+ + + + D++ + L+ G
Sbjct: 1137 TIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVRAAG 1189
Score = 274 (101.5 bits), Expect = 3.0e-114, Sum P(2) = 3.0e-114
Identities = 58/168 (34%), Positives = 107/168 (63%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 623
+++KA+L AGLY +V G + KS + K + + + +HPSS+N
Sbjct: 1211 ALLKAVLAAGLYDSV--------GKIMCT--KSVDVTEKLACMVETAQGKAQVHPSSVNR 1260
Query: 624 QLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTA 683
L+++ +L++ EKV +V+LR+TT+++PF +LLFGG I VQH+ +++DGW+ A
Sbjct: 1261 DLQTYG--WLLYQEKVRYARVYLRETTLITPFPVLLFGGDIEVQHRERLLSVDGWIYFQA 1318
Query: 684 PAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEED 731
P + AV+FK+LR+ + S+LR+ + NP+ S + N+++++ + +L+ E+
Sbjct: 1319 PVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITELIKTEN 1365
Score = 40 (19.1 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 420 LSPILSISAFLSYKSPFIYPKDEKQNVE 447
LSP L + P I PK E++++E
Sbjct: 197 LSPPLQTKTKRQEEDPKIKPKKEEKSME 224
>UNIPROTKB|J9P6V4 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AAEX03001437
Ensembl:ENSCAFT00000043416 Uniprot:J9P6V4
Length = 1369
Score = 874 (312.7 bits), Expect = 1.0e-113, Sum P(2) = 1.0e-113
Identities = 211/543 (38%), Positives = 309/543 (56%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D LT V+HVIVDEVHERS+ DFLLI+LK++L+K+S L +ILMSATVDS
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS-----DLHLILMSATVDSEK 738
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP++ GR++PV + LED+ E + L DS ++ + +N
Sbjct: 739 FSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITIN---- 794
Query: 126 KKNLVLSGWGDDSLLSEEYI--NXXXXXXXX---XXXXEQTRQNLKRLNEDVIDYDLLED 180
V S G +EYI N +T+ + +N I+ DL+ +
Sbjct: 795 ----VTSKAGGIKK-HQEYIPVNTGSSADLNPFYQKYSNRTQHAILYMNPHKINLDLILE 849
Query: 181 LVCHV---DETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVA 233
L+ ++ D + EGA+L+FLPG+A I L D L+ RF ++ALHS ++
Sbjct: 850 LLIYLEIPDRSPQFRNIEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALHSILS 908
Query: 234 SVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVED 293
+ DQ F PP +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE
Sbjct: 909 TQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVET 968
Query: 294 WISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSL 353
++S V+ G C+ +YTR R+E M Y VPE+ R+PL ELCL I +L
Sbjct: 969 FVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCLHIMKCNL 1027
Query: 354 GRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE-LTPLGHHLAKLPVDVLIGKMML 412
G + FLSKAL+PP+ + I+ A+++L ++GA E +E LTPLG HLA LPV+V IGKM++
Sbjct: 1028 GSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGKMLI 1087
Query: 413 FGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
FG IFGCL P+ +++A ++ KSPF P K + AK AL ++DS D
Sbjct: 1088 FGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSAL------AMADS-------D 1134
Query: 473 HLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLP 532
HL + AY W+K + G ++ +C + FL+ + + + D++ + L+ G +
Sbjct: 1135 HLTIYNAYLGWKKARQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELMKLVKAAGFSSST 1194
Query: 533 NKN 535
N
Sbjct: 1195 TSN 1197
Score = 282 (104.3 bits), Expect = 1.0e-113, Sum P(2) = 1.0e-113
Identities = 59/168 (35%), Positives = 107/168 (63%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 623
+++KA+L AGLY NV G + KS + K + + + +HPSS+N
Sbjct: 1214 ALLKAVLAAGLYDNV--------GKIIYT--KSVDVTEKLACIVETAQGKAQVHPSSVNR 1263
Query: 624 QLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTA 683
L+++ +L++ EKV +V+LR+TT+++PF +LLFGG I VQH+ +++DGW+ A
Sbjct: 1264 DLQTYG--WLLYQEKVRYTRVYLRETTLITPFPVLLFGGDIEVQHRERLLSVDGWIYFQA 1321
Query: 684 PAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEED 731
P + AV+FK+LR+ + S+LR+ + NP+ S + N+++++ + +L+ E+
Sbjct: 1322 PVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITELIKTEN 1368
>UNIPROTKB|E1C388 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 CTD:54505 OMA:WLLYQEK
GeneTree:ENSGT00550000074257 EMBL:AADN02054528 EMBL:AADN02054529
EMBL:AADN02054530 IPI:IPI00580778 RefSeq:XP_424728.2
UniGene:Gga.12357 Ensembl:ENSGALT00000023700 GeneID:427136
KEGG:gga:427136 NextBio:20828443 Uniprot:E1C388
Length = 1372
Score = 874 (312.7 bits), Expect = 1.7e-113, Sum P(2) = 1.7e-113
Identities = 203/532 (38%), Positives = 304/532 (57%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D L+ ++HVIVDEVHERS+ DFLL++LK++L K+S L +ILMSATVDS
Sbjct: 688 LQEDGLLSSISHVIVDEVHERSVHSDFLLVILKEILHKRS-----DLHLILMSATVDSEK 742
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP++ GR++PV + +EDV E+ Y L DS ++ + +N
Sbjct: 743 FSSYFAHCPILRISGRSYPVEVFHVEDVIEATGYVLEKDSEYCQKFLEEEEEIMIN---- 798
Query: 126 KKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQ-----TRQNLKRLNEDVIDYDLLED 180
+ G G +EY+ Q T+Q + +N I+ +L+ +
Sbjct: 799 ---VTTKGGGTTKY--QEYVPVQSGSGIDLSPYYQKYSSRTQQAVFYMNPYKINLELILE 853
Query: 181 LVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVD 236
L+ ++D + EGA+L+FLPG+A I L D ++ RF L+ALHS +++ D
Sbjct: 854 LLAYLDRSPQFKNTEGAVLIFLPGLAHIQQLYDLISTDRRFSLCDRHRLIALHSVLSTQD 913
Query: 237 QKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWIS 296
Q F PP +RK+++ATNIAET ITI DVV+V D GR KENRY+ ++SS+ E ++S
Sbjct: 914 QAAAFTVPPLGVRKIVLATNIAETGITIPDVVFVIDSGRTKENRYHESSQMSSLEETFVS 973
Query: 297 XXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRI 356
V+ G C+ +YTR R+E M Y VPE+ R+PL ELCL I +LG
Sbjct: 974 KASALQRQGRAGRVRDGFCFRMYTRDRFESFME-YSVPEILRVPLEELCLHIMKCNLGSP 1032
Query: 357 KIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMMLFGG 415
+ FLS+AL+PP+ + I A+++L ++GA + +E +LTPLG HLA LPV+V IGKM++FG
Sbjct: 1033 EDFLSRALDPPQPQVIGNAMNLLRKIGACQLNEPKLTPLGQHLAALPVNVKIGKMLIFGA 1092
Query: 416 IFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLV 475
IFGCL P+ +++A ++ KSPF P K + AK S+ + SDHL
Sbjct: 1093 IFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAK-------------SSIALAVSDHLT 1139
Query: 476 LMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIG 527
+ AY W+K + G +A +C + FL+ + + + D++ + L+ G
Sbjct: 1140 IYNAYLGWKKARQEGGHRAEMTYCRRNFLNRTSLLTLEDVKQELIKLVRAAG 1191
Score = 280 (103.6 bits), Expect = 1.7e-113, Sum P(2) = 1.7e-113
Identities = 63/168 (37%), Positives = 105/168 (62%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 623
+++KA+L AGLY NV G + KS + K + + + +HPSS+N
Sbjct: 1216 ALLKAVLTAGLYDNV--------GKIMYT--KSVDITEKLACLVETAQGKAQVHPSSVNR 1265
Query: 624 QLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTA 683
L+ H +L++ EKV KV+LR+TT++SPF ILLFGG I VQH+ +T+DGW+ A
Sbjct: 1266 DLQV--HGWLLYQEKVRYAKVYLRETTLISPFPILLFGGDIEVQHREHLLTVDGWIHFQA 1323
Query: 684 PAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEED 731
P + AV+FK+LR+ + S+L++ + NP+ S + +++V+ + +L+ E+
Sbjct: 1324 PVKIAVIFKQLRVLIESVLQKKLENPKMS-LEDDKVLHIIKELIKTEN 1370
>UNIPROTKB|I3LQ47 [details] [associations]
symbol:DHX29 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:WLLYQEK GeneTree:ENSGT00550000074257
EMBL:CU929534 Ensembl:ENSSSCT00000025611 Uniprot:I3LQ47
Length = 1370
Score = 869 (311.0 bits), Expect = 2.9e-113, Sum P(2) = 2.9e-113
Identities = 208/524 (39%), Positives = 301/524 (57%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D LT V+HVIVDEVHERS+ DFLLI+LK++L+K+S L +ILMSATVDS
Sbjct: 684 LQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQKRS-----DLHLILMSATVDSEK 738
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP++ GR++PV + LED+ E + L DS ++ + +N
Sbjct: 739 FSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEITIN---- 794
Query: 126 KKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQ-----TRQNLKRLNEDVIDYDLLED 180
V S G +EYI Q T+ + +N I+ DL+ +
Sbjct: 795 ----VTSKAGGIKKY-QEYIPVQTGTSADLNPFYQKYSNRTQHAILYMNPHKINLDLILE 849
Query: 181 LVCHVDETCG-------EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVA 233
L+ +++ T EGA+L+FLPG+A I L D L+ RF ++ALHS ++
Sbjct: 850 LLTYLEITDRSPQFKNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYK-VIALHSILS 908
Query: 234 SVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVED 293
+ DQ F PP+ +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE
Sbjct: 909 TQDQAAAFTLPPQGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVET 968
Query: 294 WISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSL 353
++S V+ G C+ +YTR R+E M Y VPE+ R+PL ELCL I +L
Sbjct: 969 FVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCLHIMKCNL 1027
Query: 354 GRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMML 412
G + FLSKAL+PP+ + I+ A+ +L ++GA E +E +LTPLG HLA LPV+V IGKM++
Sbjct: 1028 GSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKMLI 1087
Query: 413 FGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
FG IFGCL P+ +++A ++ KSPF P K + AK AL ++DS D
Sbjct: 1088 FGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSAL------AMADS-------D 1134
Query: 473 HLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMR 516
HL + AY W+K + G ++ +C + FL+ + + + R
Sbjct: 1135 HLTIYNAYLGWKKAQQEGGYRSEIAYCRRNFLNRTSLLTLERRR 1178
Score = 283 (104.7 bits), Expect = 2.9e-113, Sum P(2) = 2.9e-113
Identities = 59/168 (35%), Positives = 108/168 (64%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 623
+++KA+L AGLY NV G + KS + K + + + +HPSS+N
Sbjct: 1214 ALLKAVLTAGLYDNV--------GKIIYT--KSVDVTEKLACIVETAQGKAQVHPSSVNR 1263
Query: 624 QLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTA 683
L+++ +L++ EK+ +V+LR+TT+++PFS+LLFGG I VQH+ +++DGW+ A
Sbjct: 1264 DLQTYG--WLLYQEKIRYARVYLRETTLITPFSVLLFGGDIEVQHRERLLSVDGWIYFQA 1321
Query: 684 PAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEED 731
P + AV+FK+LR+ + S+LR+ + NP+ S + N+++++ + +L+ E+
Sbjct: 1322 PVKIAVIFKQLRVLIDSVLRKKLENPKMS-LENDKILQIITELIKTEN 1368
>ZFIN|ZDB-GENE-050419-20 [details] [associations]
symbol:si:dkey-119o24.1 "si:dkey-119o24.1"
species:7955 "Danio rerio" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-050419-20 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257
HOVERGEN:HBG081438 KO:K14442 OrthoDB:EOG4K6G3J OMA:GRIAYND
EMBL:BX908763 EMBL:BX927166 IPI:IPI00633899 RefSeq:NP_001122016.1
UniGene:Dr.130296 Ensembl:ENSDART00000109467 GeneID:569072
KEGG:dre:569072 InParanoid:A3KQN8 NextBio:20889491 Uniprot:A3KQN8
Length = 1037
Score = 863 (308.9 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 204/535 (38%), Positives = 308/535 (57%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+L D L+ +TH+++DE+HERS+ D L+ ++KDLL +A D LKV+LMSAT+++
Sbjct: 331 WLHSDPYLSSITHLVLDEIHERSVQSDILITIVKDLL---TARDD--LKVVLMSATLNAE 385
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
FS+YF +CP+I G T PVT Y LEDV E + ++ Y + G ++ R
Sbjct: 386 KFSKYFNNCPMIHIPGYTFPVTEYLLEDVVELLGFQPRYKQRKP-HYRKRNNHG--SSAR 442
Query: 125 GKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDV-IDYDLLEDLVC 183
+K + ++ E + + T + L +++D ID +L L+
Sbjct: 443 PEKGKI------EAKYHESW--PCYARTLRDRFSDTTIEVLGMMDDDDNIDLELTAALIR 494
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYRF-GGPSSDWLLALHSSVASVDQKKV-- 240
H+ EGAILVFLPG I L D L + F G ++ LHS + +V Q +V
Sbjct: 495 HIAVNENEGAILVFLPGWDNISTLNDLLMSDQMFKSGRYRFIIIPLHSLMPTVSQTQVIS 554
Query: 241 -----FLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWI 295
F +PP +RK++IATNIAETSITIDDVVYV D G+ KE +++Q + +M +W+
Sbjct: 555 LFPQVFKKPPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIRTMTAEWV 614
Query: 296 SXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGR 355
S V PG CY LY R L+ YQ+PE+QR PL ELCLQIK+L LG
Sbjct: 615 SIANAKQRKGRAGRVSPGKCYHLYNGLR-ASLLDNYQLPEIQRTPLEELCLQIKVLKLGP 673
Query: 356 IKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGG 415
I FL K ++PP + AI AI+ L ++ A++ DE+LTPLG HLA++PV+ IGKM+LFG
Sbjct: 674 IATFLQKTMDPPSDRAIELAITHLVDLNALDRDEKLTPLGFHLARMPVEPHIGKMILFGA 733
Query: 416 IFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLV 475
+ GCL P+L+I+A LS+K PF P + + K+A D+ + N ++SDHL
Sbjct: 734 LLGCLDPVLTIAASLSFKDPFFIP------LGKEKIA---DQRRKMFSQN---SRSDHLS 781
Query: 476 LMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLIN 530
++ A+ W+ ++G++ +++C FLS++ + M+++M+ QF L G +N
Sbjct: 782 IVNAFLGWEDAK-RQGSRFEREYCWDNFLSANTLQMLQNMKGQFAEHLLRAGFVN 835
Score = 230 (86.0 bits), Expect = 1.5e-108, Sum P(2) = 1.5e-108
Identities = 60/184 (32%), Positives = 100/184 (54%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N+ + + +VKA++ AGLYP VA N K K + DG+ V I
Sbjct: 845 NINSENKKLVKAVIVAGLYPKVAKISPS------HN--KKRPMPVKVYTK-ADGK--VCI 893
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTI- 675
HP S+N++ F++ +LV+ K++T +FL D T VSPFS+L FGG+I++Q Q TI
Sbjct: 894 HPKSVNAEETQFQYKWLVYHLKMKTTSIFLYDCTEVSPFSLLFFGGNISIQRDQDQDTIA 953
Query: 676 -DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP-----QNSTIANNEVVKSMIQLLLE 729
D W+ +P + A L K+L+ L +L + I++P ++ + V+ ++I L+
Sbjct: 954 VDEWIVFQSPGRIAHLVKDLKKELDVLLEEKIKSPHPVDWKDQQSKDCAVISAIIDLITT 1013
Query: 730 EDKP 733
++ P
Sbjct: 1014 QETP 1017
Score = 40 (19.1 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 435 PFIYPKDEKQNVERAKLALLTDKL 458
P + PKDEKQ A L ++L
Sbjct: 152 PKVEPKDEKQEDAIKSRASLKEEL 175
>UNIPROTKB|F6V8H1 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 OMA:RIRNRSY Ensembl:ENSCAFT00000013769
EMBL:AAEX03013695 Uniprot:F6V8H1
Length = 1122
Score = 827 (296.2 bits), Expect = 5.0e-108, Sum P(3) = 5.0e-108
Identities = 190/488 (38%), Positives = 282/488 (57%)
Query: 50 PKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAI 109
P LKVILMSAT+++ FS YFG+CP+I G T PV Y LED+ E I Y +
Sbjct: 472 PDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-VPEQKEQRS 530
Query: 110 RYEASSKSGPVNN--RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKR 167
+++ G VN + K+ + W D Y+ T ++
Sbjct: 531 QFKRGFMQGHVNRQEKEEKEAIYKERWPD-------YVRELRKRYSAS-----TVDVMEM 578
Query: 168 LNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSD--WL 225
+++D +D +L+ L+ H+ +GAILVFLPG I L D L + F SD +
Sbjct: 579 IDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDRFLI 635
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
+ LHS + +V+Q +VF + P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q
Sbjct: 636 IPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQN 695
Query: 286 KLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
+S+M +W+S V+PG CY LY R L+ YQ+PE+ R PL ELC
Sbjct: 696 NISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEELC 754
Query: 346 LQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDV 405
LQIK+L LG I FLS+ ++PP +EA++ +I L E+ A++ EELTPLG HLA+LPV+
Sbjct: 755 LQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEP 814
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSN 465
IGKM+LFG +F CL P+L+I+A LS+K PF+ P +++ + + L D
Sbjct: 815 HIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKD--------- 865
Query: 466 DSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLAD 525
T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L
Sbjct: 866 ---TKSDHLTVVNAFEGWEEAR-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLG 921
Query: 526 IGLINLPN 533
G ++ N
Sbjct: 922 AGFVSSRN 929
Score = 294 (108.6 bits), Expect = 8.0e-42, Sum P(2) = 8.0e-42
Identities = 75/215 (34%), Positives = 113/215 (52%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D +L+ V+H+++DE+HER+L D L+ V+KDLL + P LKVILMSAT+++
Sbjct: 432 WLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR-----PDLKVILMSATLNAE 486
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNN-- 122
FS YFG+CP+I G T PV Y LED+ E I Y + +++ G VN
Sbjct: 487 KFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-VPEQKEQRSQFKRGFMQGHVNRQE 545
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV 182
+ K+ + W D Y+ T ++ +++D +D +L+ L+
Sbjct: 546 KEEKEAIYKERWPD-------YVRELRKRYSAS-----TVDVMEMIDDDKVDLNLIAALI 593
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
H+ +GAILVFLPG I L D L + F
Sbjct: 594 RHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF 628
Score = 238 (88.8 bits), Expect = 5.0e-108, Sum P(3) = 5.0e-108
Identities = 62/183 (33%), Positives = 99/183 (54%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N+ +++ I+KA++CAGLYP VA L RK K DG V I
Sbjct: 936 NINSDNEKIIKAVICAGLYPKVAKIRLN-----LGKKRKMVKVYTKT-----DGL--VAI 983
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTI- 675
HP S+N + F + +L++ K+ T+ ++L D T VSP+ +L FGG I++Q Q TI
Sbjct: 984 HPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIA 1043
Query: 676 -DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTIANN-EVVKSMIQLLLE 729
D W+ +PA+ A L KELR L ++L++ I +P T + + V+ ++I L+
Sbjct: 1044 VDEWIVFQSPARIAHLVKELRKELDTLLQEKIESPHPVDWKDTKSRDCAVLSAIIDLIKT 1103
Query: 730 EDK 732
++K
Sbjct: 1104 QEK 1106
Score = 41 (19.5 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 278 ENRYNSQKKLSSMVEDWIS 296
EN+ NS+KKL + + IS
Sbjct: 246 ENKPNSEKKLENQEKKLIS 264
Score = 37 (18.1 bits), Expect = 5.0e-108, Sum P(3) = 5.0e-108
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 77 TAEGRTHPVTTYFLEDVYE 95
T G+T VT + L+D E
Sbjct: 346 TGCGKTTQVTQFILDDYIE 364
>TAIR|locus:2008144 [details] [associations]
symbol:AT1G48650 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
EMBL:CP002684 GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K14442
IPI:IPI00938568 RefSeq:NP_001154411.1 UniGene:At.22775
ProteinModelPortal:F4HYJ6 SMR:F4HYJ6 PRIDE:F4HYJ6
EnsemblPlants:AT1G48650.2 GeneID:841287 KEGG:ath:AT1G48650
OMA:GRIAYND Uniprot:F4HYJ6
Length = 1206
Score = 920 (328.9 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 215/523 (41%), Positives = 306/523 (58%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D++L GVTHV+VDE+HER + DFLLIVLKDLL ++ P LK+ILMSAT+++ LFS
Sbjct: 411 DRSLKGVTHVVVDEIHERGMNEDFLLIVLKDLLPRR-----PDLKLILMSATLNAELFSS 465
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLAL-DSAAAIRYEASSKSGPVNNRRGKK 127
YFG P + G T+PV +FLED E+ YRL + E + K + +K
Sbjct: 466 YFGGAPAMHIPGFTYPVRAHFLEDYLETSGYRLTTYNQIDDYGEEKTWKMQKQAQFKKRK 525
Query: 128 NLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCHVDE 187
+L+ S +D+L + ++ +TR +L + D I ++L+E+++CH+ +
Sbjct: 526 SLISSAV-EDALEAADFKGYNF----------RTRDSLSCWSPDSIGFNLIENVLCHIVK 574
Query: 188 TCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEK 247
GA+LVF+ G +I+ L ++L A G P+ LLA H S+AS +Q+ +F RPPE
Sbjct: 575 GERPGAVLVFMTGWDDINSLKNQLEAHSLLGDPNKVLLLACHGSMASSEQRLIFDRPPEG 634
Query: 248 IRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXX 307
IRK+++ATN+AETSITI+DVVYV DCG+ KE Y++ ++ WIS
Sbjct: 635 IRKIVLATNMAETSITINDVVYVIDCGKAKETSYDALNNTPCLLPSWISKAAARQRRGRA 694
Query: 308 XXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPP 367
V PG CY LY R YE YQ PE+ R PL LCLQIK L LG I FLS+AL+PP
Sbjct: 695 GRVMPGECYHLYPRCVYEAFA-DYQQPELLRTPLQSLCLQIKSLGLGSISEFLSRALQPP 753
Query: 368 KEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSIS 427
+ ++ A+ L +GA++ DE LTPLG +L+ LPV+ +GKM++ G IF CL P++++
Sbjct: 754 EALSVQNAVEYLKIIGALDDDENLTPLGKNLSMLPVEPKLGKMLILGAIFNCLDPVMTVV 813
Query: 428 AFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKIL 487
A LS + PF+ P D+K E A+ K G D SDHL L+ AY W+
Sbjct: 814 AGLSVRDPFLMPFDKKDLAETAR-----SKFSG----RD---YSDHLTLVRAYNGWKDA- 860
Query: 488 LKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLIN 530
+R T + +C K FLSS + + MR QF LL + LI+
Sbjct: 861 -ER-THSGYDYCWKNFLSSQTLKAMDSMRKQFFNLLKEASLID 901
Score = 166 (63.5 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 50/169 (29%), Positives = 86/169 (50%)
Query: 565 IVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQ 624
+V+AI+CAG++P V + + K + K DG +V ++ SS+N
Sbjct: 915 LVRAIICAGMFPGVCSV-----------VNKEKSITLKTME---DG--QVLLYSSSVNGN 958
Query: 625 LKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVT-IDGWLKVTA 683
+ P+LVF +KV+ N VFLRD+T VS +LLFG I+ G + + G+L+
Sbjct: 959 VPMIPFPWLVFNDKVKVNSVFLRDSTAVSDSVLLLFGDKISSGGFDGHLKMLGGYLEFFM 1018
Query: 684 PAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEEDK 732
A + L+ L +++ + NP+ I + + + I+LL+ ED+
Sbjct: 1019 KPTLAYTYLSLKRELDELIQNKLVNPKLD-IQLYDKLMTAIRLLVSEDQ 1066
>UNIPROTKB|E1C550 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 GeneTree:ENSGT00550000074257
OMA:GRIAYND EMBL:AADN02021100 IPI:IPI00601151
Ensembl:ENSGALT00000016841 Uniprot:E1C550
Length = 985
Score = 811 (290.5 bits), Expect = 9.2e-107, Sum P(3) = 9.2e-107
Identities = 190/483 (39%), Positives = 278/483 (57%)
Query: 52 LKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRY 111
LKVILMSAT+++ FS YF +CP+I G T PV Y LEDV E + Y ++ R+
Sbjct: 341 LKVILMSATLNAEKFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPE-NTDRRPRW 399
Query: 112 EASSKSGPVNN--RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLN 169
+ G ++ + K+ + W EY+ T L+ ++
Sbjct: 400 KKGFMQGHISRPEKEEKEEIYRERW-------PEYLRQLRGRYSAG-----TIDALEMMD 447
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW--LLA 227
+D +D DL+ L+ H+ +GAILVFLPG I L D L + F SD ++
Sbjct: 448 DDKVDLDLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDRFIIIP 504
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
LHS + +V+Q +VF + P +RK++IATNIAETSITIDDVV+V D G+ KE +++Q +
Sbjct: 505 LHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVFVIDGGKIKETHFDTQNNI 564
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S+M +W+S V+PG CY LY R L+ YQ+PE+ R PL ELCLQ
Sbjct: 565 STMAAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEELCLQ 623
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
IK+L LG I FLSK ++PP +A+ AI+ L E+ A++ EELTPLG HLA+LPV+ I
Sbjct: 624 IKILKLGGIAYFLSKLMDPPSRDAVMLAINHLMELNALDRQEELTPLGVHLARLPVEPHI 683
Query: 408 GKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDS 467
GKM+LFG +F CL P+L+I+A LS+K PF+ P K+ V A+ L+
Sbjct: 684 GKMILFGALFCCLDPVLTIAASLSFKDPFVIPLG-KEKVADARRKELS-----------K 731
Query: 468 STQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIG 527
+T+SDHL ++ A+ W++ +RG + + +C +YFLS + + M+ +M+ QF L G
Sbjct: 732 NTKSDHLTVVNAFTGWEETR-RRGFRTEKDYCWEYFLSPNTLQMLHNMKGQFAEHLLAAG 790
Query: 528 LIN 530
+N
Sbjct: 791 FVN 793
Score = 284 (105.0 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 75/215 (34%), Positives = 114/215 (53%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ DK+L+ ++HV++DE+HER+L D L+ ++KDLL + D LKVILMSAT+++
Sbjct: 299 WLQSDKHLSSISHVVLDEIHERNLQSDVLMSIIKDLLNVRL--D---LKVILMSATLNAE 353
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNN-- 122
FS YF +CP+I G T PV Y LEDV E + Y ++ R++ G ++
Sbjct: 354 KFSEYFDNCPMIHIPGFTFPVVEYLLEDVIEKLRYTPE-NTDRRPRWKKGFMQGHISRPE 412
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV 182
+ K+ + W EY+ T L+ +++D +D DL+ L+
Sbjct: 413 KEEKEEIYRERW-------PEYLRQLRGRYSAG-----TIDALEMMDDDKVDLDLIAALI 460
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
H+ +GAILVFLPG I L D L + F
Sbjct: 461 RHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF 495
Score = 242 (90.2 bits), Expect = 9.2e-107, Sum P(3) = 9.2e-107
Identities = 63/182 (34%), Positives = 98/182 (53%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N +++ ++KA++CAGLYP VA + S RK K DG V+I
Sbjct: 803 NTNSDNEKLLKAVICAGLYPKVAKIRP-----SFSKKRKMVKVCTKT-----DGT--VNI 850
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTI- 675
HP S+N + F + +LV+ K+ T+ ++L D T VSP+ +L FGG I++Q Q TI
Sbjct: 851 HPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQDTIA 910
Query: 676 -DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTIANNE-VVKSMIQLLLE 729
D W+ +PA+ A L K LR L +L++ I NP N T + + VV ++I L+
Sbjct: 911 VDEWIVFQSPARIAHLVKNLRQELDDLLQEKIENPHPVDWNDTKSRDSAVVAAIIDLITT 970
Query: 730 ED 731
++
Sbjct: 971 QE 972
Score = 38 (18.4 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
Identities = 7/27 (25%), Positives = 15/27 (55%)
Query: 528 LINLPNKNQTGGKKKDDLDSWFSDESQ 554
++ L N Q +K+ + SW+S + +
Sbjct: 83 IVQLLNAVQPRAEKEQEAMSWWSGDEE 109
Score = 37 (18.1 bits), Expect = 9.2e-107, Sum P(3) = 9.2e-107
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 77 TAEGRTHPVTTYFLEDVYE 95
T G+T VT + L+D E
Sbjct: 213 TGCGKTTQVTQFILDDYIE 231
>UNIPROTKB|H7C109 [details] [associations]
symbol:DHX57 "Putative ATP-dependent RNA helicase DHX57"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018693 InterPro:IPR011709 Pfam:PF07717
HGNC:HGNC:20086 ChiTaRS:DHX57 Ensembl:ENST00000452978
Uniprot:H7C109
Length = 665
Score = 873 (312.4 bits), Expect = 4.0e-106, Sum P(2) = 4.0e-106
Identities = 211/567 (37%), Positives = 323/567 (56%)
Query: 31 DFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFL 90
DFLL+VLKD++ ++ P L+VILMSAT+++ LFS YF CPVIT GRT PV +FL
Sbjct: 2 DFLLLVLKDIVSQR-----PGLQVILMSATLNAELFSDYFNSCPVITIPGRTFPVDQFFL 56
Query: 91 EDVYESINYRLALDSA--AAIRYEASSKSGPVNNRRG----KKNLVLSGW--GDDSL--- 139
ED Y L S +++ + K NR +++L LS DS+
Sbjct: 57 EDAIAVTRYVLQDGSPYMRSMKQISKEKLKARRNRTAFEEVEEDLRLSLHLQDQDSVKDA 116
Query: 140 LSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV-CHVD--ETCGEGAILV 196
+ ++ ++ + + + ++ + ++ +L+E L+ VD + GAILV
Sbjct: 117 VPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKVNLELIEALLEWIVDGKHSYPPGAILV 176
Query: 197 FLPGVAEIHILLDRLAASYRFGGPSSDWLLA--LHSSVASVDQKKVFLRPPEKIRKVIIA 254
FLPG+AEI +L ++L ++ F S+ + LHSS++S +Q+ VF++PP + K+II+
Sbjct: 177 FLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPLHSSLSSEEQQAVFVKPPAGVTKIIIS 236
Query: 255 TNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGI 314
TNIAETSITIDDVVYV D G+ KE RY++ K + S+ + ++S V G+
Sbjct: 237 TNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGRVASGV 296
Query: 315 CYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLL---SLGRIKIFLSKALEPPKEEA 371
C+ L+T H Y + Q+PE+QR+PL +LCL+IK+L S ++ S+ +EPP ++
Sbjct: 297 CFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSAHNLQSVFSRLIEPPHTDS 356
Query: 372 ITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLS 431
+ + L ++GA+ DE LTPLG+HLA LPVDV IGK+MLFG IF CL P L+I+A L+
Sbjct: 357 LRASKIRLRDLGALTPDERLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTIAASLA 416
Query: 432 YKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRG 491
+KSPF+ P D+K+ + KL + SD+L L+ AYK WQ + K G
Sbjct: 417 FKSPFVSPWDKKEEANQKKLEF-------------AFANSDYLALLQAYKGWQ-LSTKEG 462
Query: 492 TKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSD 551
+A+ +C + FLS V+ + ++ QF LL+DIG + + K+ D
Sbjct: 463 VRASYNYCRQNFLSGRVLQEMASLKRQFTELLSDIGFAREGLRAREIEKRAQGGDGVLDA 522
Query: 552 ESQMFNMYANHSSIVKAILCAGLYPNV 578
+ N A + ++ A+LCA LYPNV
Sbjct: 523 TGEEANSNAENPKLISAMLCAALYPNV 549
Score = 197 (74.4 bits), Expect = 4.0e-106, Sum P(2) = 4.0e-106
Identities = 48/132 (36%), Positives = 80/132 (60%)
Query: 583 QGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
QG G L + +NS A+ +P ++P+ + Q++ F+ P+L++ EK++T+
Sbjct: 514 QGGDGV-LDATGEEANSNAE-NPKLISAMLCAALYPNVV--QVRHFDSPYLLYHEKIKTS 569
Query: 643 KVFLRDTTIVSPFSILLFGGS-INVQHQTGQVTI---DGWLK-VTAPAQTAVLFKELRLT 697
+VF+RD ++VS + ++LFGG +NVQ Q G+ + DGW++ V A Q A L KELR
Sbjct: 570 RVFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCE 629
Query: 698 LHSILRQMIRNP 709
L +L+ I+NP
Sbjct: 630 LDQLLQDKIKNP 641
>TAIR|locus:2039280 [details] [associations]
symbol:AT2G35920 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006499
"N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14442 OMA:RIRNRSY IPI:IPI00520060
RefSeq:NP_850255.1 UniGene:At.27892 ProteinModelPortal:F4ILR7
SMR:F4ILR7 PRIDE:F4ILR7 EnsemblPlants:AT2G35920.1 GeneID:818165
KEGG:ath:AT2G35920 Uniprot:F4ILR7
Length = 995
Score = 830 (297.2 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 201/488 (41%), Positives = 284/488 (58%)
Query: 50 PKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAI 109
P L++ILMSAT+++++FS YFG+ P + G T PV FLEDV E Y + S+ +
Sbjct: 376 PDLRLILMSATINADMFSTYFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIK--SSDSG 433
Query: 110 RYEASSKSGPVNNRRGKKNLVLSGWGDDSLLSEEY-INXXXXXXXXXXXXEQTRQNLKRL 168
Y+ SS+ G KK+ D + L E+ IN TR +L+
Sbjct: 434 NYQGSSR-GRRRESESKKD-------DLTTLFEDIDINSHYKSYSSA-----TRNSLEAW 480
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+ ID DL+E + H+ G GAILVFL G EI LL+++ + F G SS +L L
Sbjct: 481 SGAQIDVDLVEATIEHICRLEGGGAILVFLTGWDEISKLLEKINMN-NFLGDSSKFLVLP 539
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
LH S+ +V+Q+++F RPP RK+++ATNIAE+SITIDDVVYV DCG+ KE Y++ K+
Sbjct: 540 LHGSMPTVNQREIFDRPPPNKRKIVLATNIAESSITIDDVVYVVDCGKAKETSYDALNKV 599
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
+ ++ WIS V+ G+CY LY + Y+ + YQ+PE+ R PL ELCL
Sbjct: 600 ACLLPSWISKASAHQRRGRAGRVQAGVCYRLYPKVIYDAFPQ-YQLPEIIRTPLQELCLH 658
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
IK L +G I FL+KAL+PP A+ AI +L +GA+ EELTPLG HL LPVD I
Sbjct: 659 IKSLQVGSIGSFLAKALQPPDALAVENAIELLKTIGALNDVEELTPLGRHLCTLPVDPNI 718
Query: 408 GKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDS 467
GKM+L G IF C++P L+I+A L+Y+SPF+ P + K+ + AK + DS
Sbjct: 719 GKMLLIGAIFQCVNPALTIAAALAYRSPFVLPLNRKEEADEAKRYF----------AGDS 768
Query: 468 STQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIG 527
SDH+ L+ AY+ ++ KRG + FC + FLS + M+ DMR QF LL+DIG
Sbjct: 769 C--SDHIALLKAYEGYRDA--KRGGNE-KDFCWQNFLSPVTLRMMEDMRNQFLDLLSDIG 823
Query: 528 LINLPNKN 535
++ N
Sbjct: 824 FVDKSKPN 831
Score = 241 (89.9 bits), Expect = 3.3e-35, Sum P(2) = 3.3e-35
Identities = 53/120 (44%), Positives = 77/120 (64%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D NLT V+H++VDE+HER + DFLLI+L+DLL ++ P L++ILMSAT+++++FS
Sbjct: 340 DPNLTNVSHLLVDEIHERGMNEDFLLIILRDLLPRR-----PDLRLILMSATINADMFST 394
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
YFG+ P + G T PV FLEDV E Y + S+ + Y+ SS+ G KK+
Sbjct: 395 YFGNSPTMHIPGFTFPVAELFLEDVLEKSRYNIK--SSDSGNYQGSSR-GRRRESESKKD 451
Score = 229 (85.7 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 58/187 (31%), Positives = 104/187 (55%)
Query: 546 DSWFSDESQ--MFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKA 603
D F D+S+ +N Y+ ++ A+LCAGLYPNV + R+ +A
Sbjct: 821 DIGFVDKSKPNAYNQYSYDMEMISAVLCAGLYPNVVQCK-----------RRGKRTAFYT 869
Query: 604 HPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGS 663
+ G+ V IHP S+N+++ F P+LV+ EKV+T V++RD+T +S +++L+FGG+
Sbjct: 870 KEL---GK--VDIHPGSVNARVNLFSLPYLVYSEKVKTTSVYIRDSTNISDYALLMFGGN 924
Query: 664 INVQHQTGQ--VTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ-NSTIANNEVV 720
+ + +TG+ + G+L +A L + LR + +L + I +P + T+ VV
Sbjct: 925 L-IPSKTGEGIEMLGGYLHFSASKNILELIQRLRGEVDKLLNKKIEDPSLDITVEGKGVV 983
Query: 721 KSMIQLL 727
++++LL
Sbjct: 984 SAVVELL 990
Score = 40 (19.1 bits), Expect = 1.9e-15, Sum P(2) = 1.9e-15
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 541 KKDDLDSWFSDESQMFNMYANHSSIVK 567
KKDDL + F D + + Y ++SS +
Sbjct: 449 KKDDLTTLFED-IDINSHYKSYSSATR 474
>TAIR|locus:2038796 [details] [associations]
symbol:AT2G01130 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002685 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K14442 IPI:IPI00528464
RefSeq:NP_178223.2 UniGene:At.42514 ProteinModelPortal:F4IM84
SMR:F4IM84 PRIDE:F4IM84 EnsemblPlants:AT2G01130.1 GeneID:814642
KEGG:ath:AT2G01130 OMA:PSWISKV Uniprot:F4IM84
Length = 1113
Score = 861 (308.1 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 198/481 (41%), Positives = 284/481 (59%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D+NL GVTHVIVDE+HER + DFLLI+LKDLL ++S +LK+ILMSAT+D+ LFS
Sbjct: 332 DRNLRGVTHVIVDEIHERGMNEDFLLIILKDLLSRRS-----ELKLILMSATLDAELFSS 386
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLA----LDSAAAIRYEASSKSGPVNNRR 124
YFG VI G T+PV ++FLED+ E YRL +D R +K P R+
Sbjct: 387 YFGGAGVIYIPGFTYPVRSHFLEDILEMTRYRLTPYNQIDDYGQERTWKMNKQIP-KKRK 445
Query: 125 GKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCH 184
+ V+ +D+L + ++ +TR++L D I ++L+E L+C+
Sbjct: 446 SQITFVV----EDALRAADF----------KEFSPETRESLSCWYPDCIGFNLIEFLLCN 491
Query: 185 VDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRP 244
+ E G G IL+FL G +I L ++L FG P LLA H S+ + +Q+ +F P
Sbjct: 492 ICENEGPGGILIFLTGWDDISSLKEKLQIHPIFGNPDLVMLLACHGSMETFEQRLIFEEP 551
Query: 245 PEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXX 304
+RK+++ATNIAETSITI+DV +V DCG+ KE Y++ ++ WIS
Sbjct: 552 ASGVRKIVLATNIAETSITINDVAFVIDCGKAKETSYDALNNTPCLLPSWISKVSAQQRR 611
Query: 305 XXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKAL 364
V+PG CY LY + Y+ YQ+PE+ R PL LCLQIK L+LG I FLS+AL
Sbjct: 612 GRAGRVRPGQCYHLYPKCVYDAFAE-YQLPEILRTPLHSLCLQIKSLNLGSISEFLSRAL 670
Query: 365 EPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPIL 424
+ P+ A+ AI+ L +GA++ +E+LT LG +L+KLP++ +GKM++ G I GCL PIL
Sbjct: 671 QSPELLAVQKAIAFLKIIGALDENEDLTTLGRYLSKLPMEPKLGKMLILGAILGCLDPIL 730
Query: 425 SISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQ 484
+++A LS + PF+ P+D+K E AK S S SDHL L+ AY+ W+
Sbjct: 731 TVAAGLSVRDPFLTPQDKKDLAEAAK-------------SQFSRDHSDHLALVRAYEGWK 777
Query: 485 K 485
K
Sbjct: 778 K 778
Score = 373 (136.4 bits), Expect = 6.6e-46, Sum P(2) = 6.6e-46
Identities = 86/200 (43%), Positives = 122/200 (61%)
Query: 331 YQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE 390
YQ+PE+ R PL LCLQIK L+LG I FLS+AL+ P+ A+ AI+ L +GA++ +E+
Sbjct: 637 YQLPEILRTPLHSLCLQIKSLNLGSISEFLSRALQSPELLAVQKAIAFLKIIGALDENED 696
Query: 391 LTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAK 450
LT LG +L+KLP++ +GKM++ G I GCL PIL+++A LS + PF+ P+D+K E AK
Sbjct: 697 LTTLGRYLSKLPMEPKLGKMLILGAILGCLDPILTVAAGLSVRDPFLTPQDKKDLAEAAK 756
Query: 451 LALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMY 510
S S SDHL L+ AY+ W+K A +C K FLS +
Sbjct: 757 -------------SQFSRDHSDHLALVRAYEGWKKA---EEESAVYDYCWKNFLSIQSLR 800
Query: 511 MIRDMRIQFGTLLADIGLIN 530
I +R +F +LL D GLI+
Sbjct: 801 AIDSLRKEFFSLLKDTGLID 820
Score = 193 (73.0 bits), Expect = 1.9e-104, Sum P(2) = 1.9e-104
Identities = 49/176 (27%), Positives = 93/176 (52%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N N +++ +A++C G+YP + + +L + DG +V +
Sbjct: 827 NSEGNDANLTRAVICYGMYPGICSVVHNERSFSLKTME--------------DG--QVLL 870
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVT-I 675
+ +S N++ +P+LVF EK++ N VFLRD+T S +++LFGGSI+ G + +
Sbjct: 871 YSNSENARETKIPYPWLVFNEKIKVNSVFLRDSTACSDSTLILFGGSISKGDTDGHLKML 930
Query: 676 DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEED 731
G+L+ A +++ L+ L +++ + NP+ A+ E++ S I+LL+ ED
Sbjct: 931 GGYLEFFMKPDVAEIYQTLKKELDELIQNKLLNPKVDMQAHRELL-SAIRLLVSED 985
>UNIPROTKB|Q9H2U1 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CH471052 GO:GO:0009615 GO:GO:0003725 EMBL:AC018452
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
HOGENOM:HOG000247063 EMBL:AF217190 EMBL:AJ577133 EMBL:AJ577134
EMBL:AK314435 EMBL:AC134026 EMBL:BC036035 EMBL:AB040921
IPI:IPI00027415 IPI:IPI00217760 IPI:IPI00784170 PIR:D56236
RefSeq:NP_001107869.1 RefSeq:NP_065916.2 UniGene:Hs.446270
ProteinModelPortal:Q9H2U1 SMR:Q9H2U1 IntAct:Q9H2U1
MINT:MINT-3066797 STRING:Q9H2U1 PhosphoSite:Q9H2U1 DMDM:74762733
PaxDb:Q9H2U1 PRIDE:Q9H2U1 DNASU:170506 Ensembl:ENST00000308361
Ensembl:ENST00000329463 Ensembl:ENST00000496811 GeneID:170506
KEGG:hsa:170506 UCSC:uc003ezy.4 UCSC:uc003ezz.4 UCSC:uc010hvq.3
CTD:170506 GeneCards:GC03M153990 HGNC:HGNC:14410 HPA:HPA035399
MIM:612767 neXtProt:NX_Q9H2U1 PharmGKB:PA27223 HOVERGEN:HBG081438
InParanoid:Q9H2U1 KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J
PhylomeDB:Q9H2U1 GenomeRNAi:170506 NextBio:88959
ArrayExpress:Q9H2U1 Bgee:Q9H2U1 CleanEx:HS_DHX36
Genevestigator:Q9H2U1 GermOnline:ENSG00000174953 Uniprot:Q9H2U1
Length = 1008
Score = 812 (290.9 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 190/485 (39%), Positives = 278/485 (57%)
Query: 52 LKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRY 111
LKVILMSAT+++ FS YFG+CP+I G T PV Y LEDV E I Y + ++
Sbjct: 360 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRY-VPEQKEHRSQF 418
Query: 112 EASSKSGPVNN--RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLN 169
+ G VN + K+ + W D Y+ T ++ +
Sbjct: 419 KRGFMQGHVNRQEKEEKEAIYKERWPD-------YVRELRRRYSAS-----TVDVIEMME 466
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA-L 228
+D +D +L+ L+ ++ +GAILVFLPG I L D L + F S +L+ L
Sbjct: 467 DDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF--KSDKFLIIPL 524
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
HS + +V+Q +VF R P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q +S
Sbjct: 525 HSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 584
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
+M +W+S V+PG CY LY R L+ YQ+PE+ R PL ELCLQI
Sbjct: 585 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEELCLQI 643
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K+L LG I FLS+ ++PP EA+ +I L E+ A++ EELTPLG HLA+LPV+ IG
Sbjct: 644 KILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIG 703
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSS 468
KM+LFG +F CL P+L+I+A LS+K PF+ P +++ + + L D
Sbjct: 704 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKD------------ 751
Query: 469 TQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGL 528
T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L G
Sbjct: 752 TRSDHLTVVNAFEGWEEAR-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGF 810
Query: 529 INLPN 533
++ N
Sbjct: 811 VSSRN 815
Score = 278 (102.9 bits), Expect = 2.1e-40, Sum P(2) = 2.1e-40
Identities = 76/215 (35%), Positives = 112/215 (52%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D L+ V+H+++DE+HER+L D L+ V+KDLL +S D LKVILMSAT+++
Sbjct: 318 WLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS--D---LKVILMSATLNAE 372
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNN-- 122
FS YFG+CP+I G T PV Y LEDV E I Y + +++ G VN
Sbjct: 373 KFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRY-VPEQKEHRSQFKRGFMQGHVNRQE 431
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV 182
+ K+ + W D Y+ T ++ + +D +D +L+ L+
Sbjct: 432 KEEKEAIYKERWPD-------YVRELRRRYSAS-----TVDVIEMMEDDKVDLNLIVALI 479
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
++ +GAILVFLPG I L D L + F
Sbjct: 480 RYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF 514
Score = 240 (89.5 bits), Expect = 3.2e-104, Sum P(2) = 3.2e-104
Identities = 62/183 (33%), Positives = 99/183 (54%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N+ +++ I+KA++CAGLYP VA L RK K DG V +
Sbjct: 822 NINSDNEKIIKAVICAGLYPKVAKIRLN-----LGKKRKMVKVYTKT-----DGL--VAV 869
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTI- 675
HP S+N + F + +L++ K+ T+ ++L D T VSP+ +L FGG I++Q Q TI
Sbjct: 870 HPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIA 929
Query: 676 -DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTIANN-EVVKSMIQLLLE 729
D W+ +PA+ A L KELR L +L++ I +P N T + + V+ ++I L+
Sbjct: 930 VDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVDWNDTKSRDCAVLSAIIDLIKT 989
Query: 730 EDK 732
++K
Sbjct: 990 QEK 992
>UNIPROTKB|Q05B79 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0043330 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:DAAA02002574
EMBL:DAAA02002573 EMBL:BC122652 IPI:IPI00686397
RefSeq:NP_001073720.1 UniGene:Bt.103344 Ensembl:ENSBTAT00000008082
GeneID:509583 KEGG:bta:509583 InParanoid:Q05B79 NextBio:20869030
Uniprot:Q05B79
Length = 1010
Score = 814 (291.6 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 187/484 (38%), Positives = 279/484 (57%)
Query: 50 PKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAI 109
P LKV+LMSAT+++ FS YFG+CP+I G T PV Y LED+ E I Y +
Sbjct: 360 PDLKVVLMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-VPEQKEHRS 418
Query: 110 RYEASSKSGPVNNRRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLN 169
+++ G VN R+ K+ +++ E + T ++ ++
Sbjct: 419 QFKKGFMQGHVN-RQEKEE-------KEAIYKERWPGYLRELRQRYSAS--TVDVVEMMD 468
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALH 229
++ +D +L+ L+ ++ +GAILVFLPG I L D L + F ++ LH
Sbjct: 469 DEKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFI-IIPLH 527
Query: 230 SSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSS 289
S + +V+Q +VF R P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q +S+
Sbjct: 528 SLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIST 587
Query: 290 MVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIK 349
M +W+S V+PG CY LY R L+ YQ+PE+ R PL ELCLQIK
Sbjct: 588 MSAEWVSKANAKQRKGRAGRVQPGHCYHLYNSLR-ASLLDDYQLPEILRTPLEELCLQIK 646
Query: 350 LLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGK 409
+L LG I FLS+ ++PP EA+ +I L E+ A++ EELTPLG HLA+LPV+ IGK
Sbjct: 647 ILRLGGIAHFLSRLMDPPSNEAVLLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIGK 706
Query: 410 MMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSST 469
M+LFG +F CL P+L+I+A LS+K PF+ P +++ + + L D T
Sbjct: 707 MILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKD------------T 754
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
+SDHL ++ A+K W+K +RG + + +C +YFLSS+ + M+ +M+ QF L G +
Sbjct: 755 KSDHLTVVNAFKGWEKAK-QRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFV 813
Query: 530 NLPN 533
+ N
Sbjct: 814 SSRN 817
Score = 276 (102.2 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 71/213 (33%), Positives = 114/213 (53%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D +L+ V+H+++DE+HER+L D L+ V+KDLL + P LKV+LMSAT+++
Sbjct: 320 WLQSDPHLSSVSHIVLDEIHERNLQSDVLMTVVKDLLSYR-----PDLKVVLMSATLNAE 374
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
FS YFG+CP+I G T PV Y LED+ E I Y + +++ G VN R+
Sbjct: 375 KFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-VPEQKEHRSQFKKGFMQGHVN-RQ 432
Query: 125 GKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCH 184
K+ +++ E + T ++ ++++ +D +L+ L+ +
Sbjct: 433 EKEE-------KEAIYKERWPGYLRELRQRYSAS--TVDVVEMMDDEKVDLNLIAALIRY 483
Query: 185 VDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
+ +GAILVFLPG I L D L + F
Sbjct: 484 IVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF 516
Score = 234 (87.4 bits), Expect = 8.3e-104, Sum P(2) = 8.3e-104
Identities = 62/183 (33%), Positives = 98/183 (53%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N+ +++ I+KA++CAGLYP VA L RK K DG V I
Sbjct: 824 NINSDNEKIIKAVICAGLYPKVAKIRLN-----LGKKRKMVKVYTKT-----DG--VVAI 871
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTI- 675
HP S+N + F + +L++ K+ T+ ++L D T VSP+ +L FGG I++Q Q TI
Sbjct: 872 HPKSVNVEQTEFNYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIA 931
Query: 676 -DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTIANN-EVVKSMIQLLLE 729
D W+ +PA+ A L KELR L +L++ I +P T + + V+ ++I L+
Sbjct: 932 VDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVDWKDTKSRDCAVLSAIIDLIKT 991
Query: 730 EDK 732
++K
Sbjct: 992 QEK 994
>TAIR|locus:504954904 [details] [associations]
symbol:ABO6 "ABA overly sensitive 6" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA;ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00358
SMART:SM00490 SMART:SM00847 InterPro:IPR014720 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 EMBL:AB005245 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 EMBL:AB008271 HOGENOM:HOG000247063
KO:K14442 EMBL:AB025625 IPI:IPI00533344 RefSeq:NP_680142.2
UniGene:At.45659 ProteinModelPortal:Q9FF84 SMR:Q9FF84 PaxDb:Q9FF84
PRIDE:Q9FF84 EnsemblPlants:AT5G04895.1 GeneID:830371
KEGG:ath:AT5G04895 TAIR:At5g04895 InParanoid:Q9FF84 OMA:MRAGHSP
PhylomeDB:Q9FF84 ProtClustDB:CLSN2680421 Genevestigator:Q9FF84
Uniprot:Q9FF84
Length = 1161
Score = 852 (305.0 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 202/526 (38%), Positives = 294/526 (55%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L D+NL GVTHV VDE+HER + DFL+IVLK+LL ++ P L+++LMSAT+++ L
Sbjct: 369 LLSDRNLNGVTHVFVDEIHERGMNEDFLIIVLKELLPRR-----PDLRLVLMSATLNAEL 423
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRL-ALDSAAAIRYEASSKSGPVNNRR 124
FS Y+G P I G THPV +FLEDV E Y+L + + E + K+ R
Sbjct: 424 FSNYYGGAPTIHIPGFTHPVKAHFLEDVLEITGYKLTSFNQVDDYGQEKTWKTQKQLMPR 483
Query: 125 GKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCH 184
+KN + + L EE ++ +TR +L D I ++L+E ++CH
Sbjct: 484 KRKNQITT-------LVEEALSKSNFESYNS----RTRDSLSSWMPDCIGFNLIEAVLCH 532
Query: 185 VDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRP 244
+ GA+LVFL G +I L D++ A G P+ LL H S+A+ +Q+ +F R
Sbjct: 533 ICRKERPGAVLVFLTGWDDIRSLSDQIKAHPLLGDPNRVLLLMCHGSMATAEQRLIFERA 592
Query: 245 PEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXX 304
P IRK+++ATN+AE SITI+DVV+V DCG+ KE Y++ ++ WIS
Sbjct: 593 PPNIRKIVLATNMAEASITINDVVFVVDCGKAKETTYDALNNTPCLLPSWISQASARQRR 652
Query: 305 XXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKAL 364
+ PG CY LY + Y+ YQ+PE+ R PL LCLQIK L + I FLS AL
Sbjct: 653 GRAGRLFPGECYHLYPKCVYDAFAE-YQLPELLRTPLNSLCLQIKSLQVESIAEFLSAAL 711
Query: 365 EPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPIL 424
+ P+ A+ AI L +GA++ E LT LG L+ LPVD +GKM++ G IF C PIL
Sbjct: 712 QAPESLAVQNAIGFLKMIGALDEKENLTDLGKLLSILPVDPKLGKMLIMGAIFRCFDPIL 771
Query: 425 SISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQ 484
+I + LS + PF+ P+D+K AKL + D SDH+ L+ A++ W
Sbjct: 772 TIVSGLSVRDPFLLPQDKKDLALSAKLRF---------SAKD---YSDHMALVRAFEGW- 818
Query: 485 KILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLIN 530
K + G+ A +FC + FLS+ + I +R QF +L + GL++
Sbjct: 819 KDAEREGS--AYEFCWRNFLSAQTLQAIHSLRKQFNYILKEAGLVH 862
Score = 191 (72.3 bits), Expect = 2.8e-103, Sum P(2) = 2.8e-103
Identities = 50/183 (27%), Positives = 98/183 (53%)
Query: 551 DESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDG 610
D+ + N +++ S+V+A++C+GL+P +A+ R++S S DG
Sbjct: 863 DDLALNNKLSHNQSLVRAVICSGLFPGIASVVH----------RETSMSFKTMD----DG 908
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT 670
+V ++ +S+NS+ + +P+LVF EKV+ N V +RD+T V S++LFGGS++ Q
Sbjct: 909 --QVSLYANSVNSRFPTIPYPWLVFGEKVKVNAVLIRDSTGVPDSSLILFGGSLSTGVQV 966
Query: 671 GQVT-IDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLE 729
G + +DG++ A + +L+ L +L++ + +P + + +Q L+
Sbjct: 967 GHLKMLDGYIDFFMDPNLAESYVKLKEELDKLLQKKLEDPSMDIHKEGKYLMLAVQELVA 1026
Query: 730 EDK 732
D+
Sbjct: 1027 GDQ 1029
>MGI|MGI:1919412 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009615 "response to virus"
evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1919412 GO:GO:0005524 GO:GO:0005634 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0043330 EMBL:CH466530 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 CTD:170506 HOVERGEN:HBG081438
KO:K14442 OMA:RIRNRSY OrthoDB:EOG4K6G3J EMBL:AF448804 EMBL:AC114424
EMBL:AK129373 EMBL:AK013031 IPI:IPI00351266 RefSeq:NP_082412.2
UniGene:Mm.224233 ProteinModelPortal:Q8VHK9 DIP:DIP-48576N
STRING:Q8VHK9 PhosphoSite:Q8VHK9 PaxDb:Q8VHK9 PRIDE:Q8VHK9
Ensembl:ENSMUST00000029336 GeneID:72162 KEGG:mmu:72162
UCSC:uc008pjn.2 InParanoid:Q8VHK9 ChiTaRS:DHX36 NextBio:335597
CleanEx:MM_DHX36 Genevestigator:Q8VHK9
GermOnline:ENSMUSG00000027770 Uniprot:Q8VHK9
Length = 1001
Score = 811 (290.5 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 191/491 (38%), Positives = 282/491 (57%)
Query: 43 KQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLA 102
K H LKVILMSAT+++ FS YFG+CP+I G T PV Y LED+ E I Y +
Sbjct: 344 KDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-VP 402
Query: 103 LDSAAAIRYEASSKSGPVNNRRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTR 162
+++ G VN R+ K+ +++ E + T
Sbjct: 403 DQKEHRSQFKRGFMQGHVN-RQEKEE-------KEAIYKERW--PAYIKELRTRYSASTV 452
Query: 163 QNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSS 222
L+ +++D +D +L+ L+ ++ +GAILVFLPG I L D L + F S
Sbjct: 453 DVLQMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF--KSD 510
Query: 223 DWLLA-LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
+L+ LHS + +V+Q +VF + P +RK++IATNIAETSITIDDVVYV D G+ KE +
Sbjct: 511 KFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHF 570
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
++Q +S+M +W+S V+PG CY LY R L+ YQ+PE+ R PL
Sbjct: 571 DTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPL 629
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
ELCLQIK+L LG I FLS+ ++PP EA+ +I L E+ A++ EELTPLG HLA+L
Sbjct: 630 EELCLQIKILRLGGIAYFLSRLMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARL 689
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYP--KDEKQNVERAKLALLTDKLE 459
PV+ IGKM+LFG +F CL P+L+I+A LS+K PF+ P K++ + R +LA
Sbjct: 690 PVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELA------- 742
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ QF
Sbjct: 743 -------KETRSDHLTVVNAFEGWEEAK-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQF 794
Query: 520 GTLLADIGLIN 530
L G ++
Sbjct: 795 AEHLLGAGFVS 805
Score = 282 (104.3 bits), Expect = 8.1e-40, Sum P(2) = 8.1e-40
Identities = 74/213 (34%), Positives = 112/213 (52%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D L+ V+H+++DE+HER+L D L+ V+KDLL H LKVILMSAT+++
Sbjct: 311 WLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLL-----HFRSDLKVILMSATLNAE 365
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
FS YFG+CP+I G T PV Y LED+ E I Y + +++ G VN R+
Sbjct: 366 KFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-VPDQKEHRSQFKRGFMQGHVN-RQ 423
Query: 125 GKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCH 184
K+ +++ E + T L+ +++D +D +L+ L+ +
Sbjct: 424 EKEE-------KEAIYKERW--PAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRY 474
Query: 185 VDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
+ +GAILVFLPG I L D L + F
Sbjct: 475 IVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF 507
Score = 230 (86.0 bits), Expect = 4.6e-103, Sum P(2) = 4.6e-103
Identities = 59/183 (32%), Positives = 99/183 (54%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N+ +++ I+KA++CAGLYP VA NL K K H DG V I
Sbjct: 815 NINSDNEKIIKAVICAGLYPKVAKIRL--------NLGKK-RKMVKVHTK-SDGL--VSI 862
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQ--VT 674
HP S+N + F + +L++ K+ T+ ++L D T VSP+ +L FGG I++Q Q +
Sbjct: 863 HPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQEIIA 922
Query: 675 IDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTIANN-EVVKSMIQLLLE 729
+D W+ +P + A L K LR L S+L++ I +P + T + + V+ +++ L+
Sbjct: 923 VDEWIVFQSPERIAHLVKGLRKELDSLLQEKIESPHPVDWDDTKSRDCAVLSAILDLIKT 982
Query: 730 EDK 732
++K
Sbjct: 983 QEK 985
>RGD|1308767 [details] [associations]
symbol:Dhx36 "DEAH (Asp-Glu-Ala-His) box polypeptide 36"
species:10116 "Rattus norvegicus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA;ISO]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308767 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
GeneTree:ENSGT00550000074257 CTD:170506 KO:K14442 OMA:RIRNRSY
OrthoDB:EOG4K6G3J EMBL:CH474003 IPI:IPI00367998
RefSeq:NP_001101148.1 UniGene:Rn.2744 Ensembl:ENSRNOT00000019824
GeneID:310461 KEGG:rno:310461 UCSC:RGD:1308767 NextBio:662035
Uniprot:D4A2Z8
Length = 1000
Score = 812 (290.9 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 191/492 (38%), Positives = 282/492 (57%)
Query: 43 KQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLA 102
K H LKVILMSAT+++ FS YFG+CP+I G T PV Y LED+ E I Y
Sbjct: 343 KDLLHFRSDLKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-FP 401
Query: 103 LDSAAAIRYEASSKSGPVNNRRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTR 162
+++ G VN R+ K+ +++ E + T
Sbjct: 402 EQKEHRSQFKRGFMQGHVN-RQEKEE-------KEAIYKERW--PAYIKELQTRYSASTI 451
Query: 163 QNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSS 222
L+ +++D +D +L+ L+ ++ +GAILVFLPG I L D L + F S
Sbjct: 452 DVLEMMDDDKVDLNLIAALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KS 508
Query: 223 D--WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENR 280
D ++ LHS + +V+Q +VF + P +RK++IATNIAETSITIDDVVYV D G+ KE
Sbjct: 509 DRFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETH 568
Query: 281 YNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMP 340
+++Q +S+M +W+S V+PG CY LY R L+ YQ+PE+ R P
Sbjct: 569 FDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTP 627
Query: 341 LVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAK 400
L ELCLQIK+L LG I FLS+ ++PP +EA+ +I L E+ A++ EELTPLG HLA+
Sbjct: 628 LEELCLQIKILRLGGIAYFLSRLMDPPSDEAVVLSIKHLMELSALDKQEELTPLGVHLAR 687
Query: 401 LPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYP--KDEKQNVERAKLALLTDKL 458
LPV+ IGKM+LFG +F CL P+L+I+A LS+K PF+ P K++ + R +LA
Sbjct: 688 LPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELA------ 741
Query: 459 EGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQ 518
T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ Q
Sbjct: 742 --------KETRSDHLTVVNAFEGWEEAK-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQ 792
Query: 519 FGTLLADIGLIN 530
F L G ++
Sbjct: 793 FAEHLLGAGFVS 804
Score = 282 (104.3 bits), Expect = 2.7e-39, Sum P(2) = 2.7e-39
Identities = 74/213 (34%), Positives = 111/213 (52%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D L+ V+H+++DE+HER+L D L+ V+KDLL H LKVILMSAT+++
Sbjct: 310 WLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLL-----HFRSDLKVILMSATLNAE 364
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
FS YFG+CP+I G T PV Y LED+ E I Y +++ G VN R+
Sbjct: 365 KFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-FPEQKEHRSQFKRGFMQGHVN-RQ 422
Query: 125 GKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCH 184
K+ +++ E + T L+ +++D +D +L+ L+ +
Sbjct: 423 EKEE-------KEAIYKERW--PAYIKELQTRYSASTIDVLEMMDDDKVDLNLIAALIRY 473
Query: 185 VDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
+ +GAILVFLPG I L D L + F
Sbjct: 474 IVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF 506
Score = 225 (84.3 bits), Expect = 1.2e-102, Sum P(2) = 1.2e-102
Identities = 59/183 (32%), Positives = 97/183 (53%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N+ +++ I+KA++CAGLYP VA NL K K H DG V I
Sbjct: 814 NINSDNEKIIKAVICAGLYPKVAKIRL--------NLGKK-RKMVKVHTK-SDGL--VSI 861
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQ--VT 674
HP S+N + F + +L++ K+ T+ ++L D T VSP+ +L FGG I++Q Q +
Sbjct: 862 HPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKDQEIIA 921
Query: 675 IDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTIANN-EVVKSMIQLLLE 729
+D W+ +P + A L K LR L +L++ I P N T + + V+ +++ L+
Sbjct: 922 VDEWIVFQSPERIAHLVKGLRKELDILLQEKIECPHPVDWNDTKSRDCAVLSAILDLIKT 981
Query: 730 EDK 732
++K
Sbjct: 982 QEK 984
>FB|FBgn0030246 [details] [associations]
symbol:CG1582 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000571 InterPro:IPR001650 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00642 Pfam:PF04408 Pfam:PF05773 PROSITE:PS50103
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0008270 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 KO:K13026 EMBL:AY119481
RefSeq:NP_572663.1 UniGene:Dm.11248 SMR:Q9VZ55
EnsemblMetazoa:FBtr0073403 GeneID:32021 KEGG:dme:Dmel_CG1582
UCSC:CG1582-RA FlyBase:FBgn0030246 InParanoid:Q9VZ55 OMA:IFQCLDS
OrthoDB:EOG4RJDGG ChiTaRS:CG1582 GenomeRNAi:32021 NextBio:776414
Uniprot:Q9VZ55
Length = 1288
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 254/727 (34%), Positives = 406/727 (55%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L D L VTHVIVDEVHERS DFLL++LK+LL ++ D LKVILMSAT+++ L
Sbjct: 569 LASDPLLGSVTHVIVDEVHERSEESDFLLLILKNLLRERK--D---LKVILMSATLNAAL 623
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YFG PV+ GRT PV FLED+ E ++ + D+ + + + +
Sbjct: 624 FSDYFGGAPVLDIPGRTFPVQQLFLEDILEMSDFVMEYDTKYCRKLKKQEQE-ILERELE 682
Query: 126 KKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCHV 185
++ SG + +E + + T +++ + I+ +L+E ++ ++
Sbjct: 683 YADVQASGEAPGKKIKDEKLTLAETYQRYAEYSKPTCKSIYLMEPMTINPELIESVLKYI 742
Query: 186 DETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA-LHSSVASVDQKKV 240
E EG IL+FLPG EI + D L + F + ++L LHS+++ DQ V
Sbjct: 743 VEGSHDWPREGTILIFLPGFGEIQSVHDSLLDNALFSPRAGKFILVPLHSALSGEDQALV 802
Query: 241 FLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXX 300
F + P RK++++TNIAETS+TIDD V+V DCG KE ++S + + S+ W+S
Sbjct: 803 FKKAPPGKRKIVLSTNIAETSVTIDDCVFVVDCGLMKEKCFDSNRNMESLDLVWVSRANA 862
Query: 301 XXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLL----SLGRI 356
V PG+C LYT +RY+ + VPE+QR+PL ++ L+IK L S +
Sbjct: 863 KQRKGRAGRVMPGVCIHLYTSYRYQYHILAQPVPEIQRVPLEQIVLRIKTLQTFASRNTL 922
Query: 357 KIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGI 416
+ L + LE P E+++ A++ L +VGA++ +++LTPLGHHLA LPVDV IGK+ML+G I
Sbjct: 923 SVLL-ETLEAPTEDSVLGALTRLRDVGALDAEDQLTPLGHHLAALPVDVRIGKLMLYGAI 981
Query: 417 FGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVL 476
F CL +L+I+A LS KSPF+ P +++ ++ K ++ L +S DHL +
Sbjct: 982 FQCLDSVLTIAACLSNKSPFVSPLNKRTEADKCK------RMFALGNS-------DHLTV 1028
Query: 477 MVAYKKWQKILLKRGTKAAQQ-FCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKN 535
+ AY+KW + +RG AA + + S++FLS + + I D++ Q+ LL IG + +
Sbjct: 1029 LNAYRKWLDVA-RRGNYAASRNYASEHFLSLNTLETIADLKYQYLELLVSIGFVPI---- 1083
Query: 536 QTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAA--TEQGV----AGAA 589
++K+ D+ + N +++ ++ ++LCA LYPN+ T V AG A
Sbjct: 1084 DVPRRRKNACDNILTLTGVEQNHNGDNNRLLTSLLCAALYPNIVKIMTPDRVYIQTAGGA 1143
Query: 590 LSNLRKSSNSAAKAHPVWYDGRRE--VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
+ R+ S+ H + + R + V IHPSS+NSQ+ F+ PFLVF EKV T+ +++R
Sbjct: 1144 VP--REPSH-----HDLRFKTRGDGYVKIHPSSVNSQVSVFQAPFLVFQEKVRTSAIYIR 1196
Query: 648 DTTIVSPFSILLFGGS-INVQHQTGQVTI---DGWLKVTA-PAQTAVLFKELRLTLHSIL 702
D +++ +++LF GS V+ G GW+ + A +TA + + LR + +L
Sbjct: 1197 DCSMLPLIAMVLFAGSDFKVELHDGDFLFLLESGWIILKAHDLETAEMVQCLRAEMIKLL 1256
Query: 703 RQMIRNP 709
+ IR+P
Sbjct: 1257 EEKIRDP 1263
>DICTYBASE|DDB_G0267516 [details] [associations]
symbol:dhx57 "RWD domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
dictyBase:DDB_G0267516 GO:GO:0005524 GenomeReviews:CM000150_GR
EMBL:AAFI02000003 GO:GO:0003676 InterPro:IPR015940 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13026
RefSeq:XP_647095.1 ProteinModelPortal:Q55GT9
EnsemblProtists:DDB0235268 GeneID:8615899 KEGG:ddi:DDB_G0267516
OMA:EVHERST Uniprot:Q55GT9
Length = 1451
Score = 797 (285.6 bits), Expect = 1.5e-92, Sum P(2) = 1.5e-92
Identities = 209/597 (35%), Positives = 327/597 (54%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLA---ASYRFGGPSS 222
KR+N DV++ L+ LV V + + +ILVF+PG+++I L RL +++
Sbjct: 875 KRINLDVVE-SLILHLVNGVLKK--DKSILVFVPGLSDILELCSRLGKPISTFTEAICQR 931
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
W + LHSS++ DQ+KVF + P KV+IATNIAETSITI+DV V DCGR + +N
Sbjct: 932 IWCVPLHSSLSPKDQQKVFEKAPNGRVKVVIATNIAETSITIEDVEIVVDCGRVNQMTFN 991
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
S S M E+W S G+C+ ++T+ E ++ PE+ R L
Sbjct: 992 SITGNSVMSEEWTSKASCRQRAGRAGRTSSGLCFKVFTKSM-ESQLQDQDTPEILRTSLQ 1050
Query: 343 ELCLQIKLLSLGR----IKIFLSKALEPPKEEAITTAISVLYEVGAI----EGDEELTPL 394
+LCL +KL I+ FL++A+EPP E I ++I+ L + A+ + +ELTPL
Sbjct: 1051 QLCLHVKLFLKNNKNTTIQDFLNRAIEPPSSEQIQSSINELISIDALKINQQQQQELTPL 1110
Query: 395 GHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALL 454
G+HLA LPVDV IGKM+LFG IF CL PIL+I+A L+YKSPF+ P D K
Sbjct: 1111 GYHLASLPVDVYIGKMLLFGCIFRCLDPILTIAATLNYKSPFLNPPD--------KTIRP 1162
Query: 455 TDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRD 514
DK S QSDH L+ AY W+K + + G + QFC + +LS + I+D
Sbjct: 1163 MDKFS-------SPNQSDHQTLINAYNSWRKSI-QDGNE--YQFCRENYLSIPTLRTIQD 1212
Query: 515 MRIQFGTLLADIGLI-------NLPNKNQTGGKKKDDLDSWFSDE--SQMFNMYANHSSI 565
+++QF +L++IG + + Q +K ++ + DE ++N ++ S I
Sbjct: 1213 LKLQFVEILSEIGFLPQSITAKKIAKLQQQQQQKGNNYSNDCIDEFVGYIYNSNSSKSKI 1272
Query: 566 VKAILCAGLYPNVAATE-------QGVAGAALSNLRKSSNSAAKAHPVWYDGR--REVHI 616
+ ++LCAG+YP +A + Q +GA + S P G+ V I
Sbjct: 1273 ITSVLCAGMYPKIARIDYPDAKYSQTASGAIKNKYSPESLLLLTKPPNCGPGKPLERVFI 1332
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLF--GGSINVQHQTGQVT 674
HP S N + + +PF+++ +KV+T+K+FL T +SP ++LLF GG+I + ++
Sbjct: 1333 HPRSTNFKEGEWVYPFIIYNDKVKTSKLFLHHITNLSPLTLLLFSLGGNIEIDKSYQTIS 1392
Query: 675 IDGWLKVTAPA-QTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMIQLLLEE 730
+D WLK A + + VL KE+R+ + +L+Q I P ST +++ ++ + +L+L E
Sbjct: 1393 LDKWLKFKATSGKIIVLLKEIRILFNHLLKQKIDQPSYST-SSSIIIDIITKLVLSE 1448
Score = 164 (62.8 bits), Expect = 1.5e-92, Sum P(2) = 1.5e-92
Identities = 36/90 (40%), Positives = 58/90 (64%)
Query: 11 NLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYF 70
N++ ++H+I+DEVHERS DFLLI+L++++ K+ D LK+ILMSAT+++ + YF
Sbjct: 744 NISDLSHIIIDEVHERSTDNDFLLIILREIISKRK--D---LKIILMSATLNAKQIANYF 798
Query: 71 G--DCPVITAEGRTHPVTTYFLEDVYESIN 98
D + + G T PV ++ +V IN
Sbjct: 799 KCTDDSIFSIPGFTFPVKNIYINEVLPLIN 828
>UNIPROTKB|E2QTL7 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
Ensembl:ENSCAFT00000013769 Uniprot:E2QTL7
Length = 988
Score = 664 (238.8 bits), Expect = 1.2e-89, Sum P(3) = 1.2e-89
Identities = 149/369 (40%), Positives = 223/369 (60%)
Query: 165 LKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW 224
++ +++D +D +L+ L+ H+ +GAILVFLPG I L D L + F SD
Sbjct: 456 MEMIDDDKVDLNLIAALIRHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSD- 511
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
++ Q VF + P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q
Sbjct: 512 ---------TIGQ--VFKKTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 560
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+S+M +W+S V+PG CY LY R L+ YQ+PE+ R PL EL
Sbjct: 561 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEEL 619
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
CLQIK+L LG I FLS+ ++PP +EA++ +I L E+ A++ EELTPLG HLA+LPV+
Sbjct: 620 CLQIKILRLGGIAYFLSRLMDPPSDEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVE 679
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
IGKM+LFG +F CL P+L+I+A LS+K PF+ P +++ + + L D
Sbjct: 680 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKD-------- 731
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLA 524
T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L
Sbjct: 732 ----TKSDHLTVVNAFEGWEEAR-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL 786
Query: 525 DIGLINLPN 533
G ++ N
Sbjct: 787 GAGFVSSRN 795
Score = 294 (108.6 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 75/215 (34%), Positives = 113/215 (52%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D +L+ V+H+++DE+HER+L D L+ V+KDLL + P LKVILMSAT+++
Sbjct: 312 WLQSDSHLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFR-----PDLKVILMSATLNAE 366
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNN-- 122
FS YFG+CP+I G T PV Y LED+ E I Y + +++ G VN
Sbjct: 367 KFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-VPEQKEQRSQFKRGFMQGHVNRQE 425
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV 182
+ K+ + W D Y+ T ++ +++D +D +L+ L+
Sbjct: 426 KEEKEAIYKERWPD-------YVRELRKRYSAS-----TVDVMEMIDDDKVDLNLIAALI 473
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
H+ +GAILVFLPG I L D L + F
Sbjct: 474 RHIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF 508
Score = 238 (88.8 bits), Expect = 1.2e-89, Sum P(3) = 1.2e-89
Identities = 62/183 (33%), Positives = 99/183 (54%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N+ +++ I+KA++CAGLYP VA L RK K DG V I
Sbjct: 802 NINSDNEKIIKAVICAGLYPKVAKIRLN-----LGKKRKMVKVYTKT-----DGL--VAI 849
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTI- 675
HP S+N + F + +L++ K+ T+ ++L D T VSP+ +L FGG I++Q Q TI
Sbjct: 850 HPKSVNVEQTEFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIA 909
Query: 676 -DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTIANN-EVVKSMIQLLLE 729
D W+ +PA+ A L KELR L ++L++ I +P T + + V+ ++I L+
Sbjct: 910 VDEWIVFQSPARIAHLVKELRKELDTLLQEKIESPHPVDWKDTKSRDCAVLSAIIDLIKT 969
Query: 730 EDK 732
++K
Sbjct: 970 QEK 972
Score = 41 (19.5 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 278 ENRYNSQKKLSSMVEDWIS 296
EN+ NS+KKL + + IS
Sbjct: 126 ENKPNSEKKLENQEKKLIS 144
Score = 37 (18.1 bits), Expect = 1.2e-89, Sum P(3) = 1.2e-89
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 77 TAEGRTHPVTTYFLEDVYE 95
T G+T VT + L+D E
Sbjct: 226 TGCGKTTQVTQFILDDYIE 244
>UNIPROTKB|F1MNU7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 CTD:64848 OMA:RAFWESS EMBL:DAAA02027655
IPI:IPI00689346 RefSeq:NP_001179740.1 UniGene:Bt.24975
ProteinModelPortal:F1MNU7 Ensembl:ENSBTAT00000018745 GeneID:541024
KEGG:bta:541024 NextBio:20878969 Uniprot:F1MNU7
Length = 1429
Score = 597 (215.2 bits), Expect = 4.5e-89, Sum P(4) = 4.5e-89
Identities = 142/361 (39%), Positives = 210/361 (58%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDR-LAASYRFGGPSSDW-LL 226
+++ +D DL+ L+ ++ +C GAIL+FLPG EI L DR L RF + + +
Sbjct: 599 DDEKVDLDLIMHLLYNICHSCEAGAILIFLPGYDEIVGLRDRILFDDKRFAENAHRYQVF 658
Query: 227 ALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKK 286
LHS++ + DQKKV PP +RK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 659 MLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNF 718
Query: 287 LSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCL 346
++ + WIS +PGIC+ L++R R++ ++ +Q PE+ RMPL ELCL
Sbjct: 719 VTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLE-FQTPELLRMPLQELCL 777
Query: 347 QIKLLSLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
KLL+ I FL KA EPP + A+ +L + A++ E+LT LG+HLA LPV+
Sbjct: 778 HTKLLAPVNCAIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVE 837
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
+GKM+L + CL PIL+I+ L+Y+ PF+ P Q +RA A+L K
Sbjct: 838 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQ--KRA--AMLCRK------R 887
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF-GTLL 523
+ T SDH+ L+ A++ WQK R + FC K FLS + M +I MR Q G L
Sbjct: 888 FTAGTFSDHMALLRAFQAWQKA---RSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 944
Query: 524 A 524
A
Sbjct: 945 A 945
Score = 240 (89.5 bits), Expect = 4.5e-89, Sum P(4) = 4.5e-89
Identities = 52/94 (55%), Positives = 61/94 (64%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLL L+DLL+K H P LK+IL SA +D NL
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQK---H--PTLKLILSSAALDVNL 354
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F RYFG CPVI +GR V FLED+ + Y
Sbjct: 355 FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 388
Score = 83 (34.3 bits), Expect = 4.5e-89, Sum P(4) = 4.5e-89
Identities = 39/169 (23%), Positives = 76/169 (44%)
Query: 498 FCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFN 557
FC K FLS + M +I MR Q L G + + + GG +D N
Sbjct: 918 FCEKNFLSQATMEIIIGMRTQLLGQLRASGFV----RARGGGDIRD------------VN 961
Query: 558 MYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIH 617
+ + ++VKA L AG+YP++ ++ L+ ++ + HP + +
Sbjct: 962 TNSENWAVVKAALVAGMYPHLVHVDR--ENVVLAGPKEKK---VRFHPTSVLSQPQYKKI 1016
Query: 618 PSSINSQ---LKSFEHPFLVFLEKVETNKVF-LRDTTIVSPFSILLFGG 662
P + N Q +++ +L++ E +++ +R + V+P ++L+F G
Sbjct: 1017 PPA-NGQTAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCG 1064
Score = 59 (25.8 bits), Expect = 4.5e-89, Sum P(4) = 4.5e-89
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 675 IDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEV-VKSMIQLLLEEDK 732
+D WL + A L +LR HS+ + +R P +E ++++I +L E++
Sbjct: 1106 LDEWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQ 1164
Score = 41 (19.5 bits), Expect = 2.2e-20, Sum P(4) = 2.2e-20
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 200 GVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
G EI LL+ +AS FG L+ S S + +++
Sbjct: 550 GQTEIVDLLESYSASLEFGNLDESSLVQTSGSDLSAEDREL 590
Score = 37 (18.1 bits), Expect = 2.7e-80, Sum P(3) = 2.7e-80
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 536 QTGGKKKDDLDSWFSDES 553
++ +K D+ FSDES
Sbjct: 1193 RSNNSRKSSADTEFSDES 1210
>UNIPROTKB|E7EWK3 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0043330 "response to
exogenous dsRNA" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0009615 GO:GO:0003725
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 GO:GO:0043330
EMBL:AC134026 HGNC:HGNC:14410 IPI:IPI00945848
ProteinModelPortal:E7EWK3 SMR:E7EWK3 Ensembl:ENST00000481941
ArrayExpress:E7EWK3 Bgee:E7EWK3 Uniprot:E7EWK3
Length = 797
Score = 812 (290.9 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 190/485 (39%), Positives = 278/485 (57%)
Query: 52 LKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRY 111
LKVILMSAT+++ FS YFG+CP+I G T PV Y LEDV E I Y + ++
Sbjct: 274 LKVILMSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRY-VPEQKEHRSQF 332
Query: 112 EASSKSGPVNN--RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLN 169
+ G VN + K+ + W D Y+ T ++ +
Sbjct: 333 KRGFMQGHVNRQEKEEKEAIYKERWPD-------YVRELRRRYSAS-----TVDVIEMME 380
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA-L 228
+D +D +L+ L+ ++ +GAILVFLPG I L D L + F S +L+ L
Sbjct: 381 DDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF--KSDKFLIIPL 438
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
HS + +V+Q +VF R P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q +S
Sbjct: 439 HSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 498
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
+M +W+S V+PG CY LY R L+ YQ+PE+ R PL ELCLQI
Sbjct: 499 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEELCLQI 557
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K+L LG I FLS+ ++PP EA+ +I L E+ A++ EELTPLG HLA+LPV+ IG
Sbjct: 558 KILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIG 617
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSS 468
KM+LFG +F CL P+L+I+A LS+K PF+ P +++ + + L D
Sbjct: 618 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKD------------ 665
Query: 469 TQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGL 528
T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L G
Sbjct: 666 TRSDHLTVVNAFEGWEEAR-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGF 724
Query: 529 INLPN 533
++ N
Sbjct: 725 VSSRN 729
Score = 278 (102.9 bits), Expect = 2.6e-24, Sum P(2) = 2.6e-24
Identities = 76/215 (35%), Positives = 112/215 (52%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D L+ V+H+++DE+HER+L D L+ V+KDLL +S D LKVILMSAT+++
Sbjct: 232 WLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS--D---LKVILMSATLNAE 286
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNN-- 122
FS YFG+CP+I G T PV Y LEDV E I Y + +++ G VN
Sbjct: 287 KFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRY-VPEQKEHRSQFKRGFMQGHVNRQE 345
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV 182
+ K+ + W D Y+ T ++ + +D +D +L+ L+
Sbjct: 346 KEEKEAIYKERWPD-------YVRELRRRYSAS-----TVDVIEMMEDDKVDLNLIVALI 393
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
++ +GAILVFLPG I L D L + F
Sbjct: 394 RYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF 428
Score = 83 (34.3 bits), Expect = 1.2e-87, Sum P(2) = 1.2e-87
Identities = 24/74 (32%), Positives = 35/74 (47%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N+ +++ I+KA++CAGLYP VA L RK K DG V +
Sbjct: 736 NINSDNEKIIKAVICAGLYPKVAKIRLN-----LGKKRKMVKVYTKT-----DGL--VAV 783
Query: 617 HPSSINSQLKSFEH 630
HP S+N + F +
Sbjct: 784 HPKSVNVEQTDFHY 797
>UNIPROTKB|F5GZS0 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003676
EMBL:AC018452 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AC134026
HGNC:HGNC:14410 IPI:IPI00922725 ProteinModelPortal:F5GZS0
SMR:F5GZS0 PRIDE:F5GZS0 Ensembl:ENST00000544526 ArrayExpress:F5GZS0
Bgee:F5GZS0 Uniprot:F5GZS0
Length = 994
Score = 650 (233.9 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 147/369 (39%), Positives = 217/369 (58%)
Query: 165 LKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW 224
++ + +D +D +L+ L+ ++ +GAILVFLPG I L D L + F
Sbjct: 462 IEMMEDDKVDLNLIVALIRYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF------- 514
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
S +VF R P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q
Sbjct: 515 --------KSGTMSQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQ 566
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+S+M +W+S V+PG CY LY R L+ YQ+PE+ R PL EL
Sbjct: 567 NNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEEL 625
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
CLQIK+L LG I FLS+ ++PP EA+ +I L E+ A++ EELTPLG HLA+LPV+
Sbjct: 626 CLQIKILRLGGIAYFLSRLMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVE 685
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
IGKM+LFG +F CL P+L+I+A LS+K PF+ P +++ + + L D
Sbjct: 686 PHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKIADARRKELAKD-------- 737
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLA 524
T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L
Sbjct: 738 ----TRSDHLTVVNAFEGWEEAR-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLL 792
Query: 525 DIGLINLPN 533
G ++ N
Sbjct: 793 GAGFVSSRN 801
Score = 278 (102.9 bits), Expect = 2.0e-40, Sum P(2) = 2.0e-40
Identities = 75/215 (34%), Positives = 111/215 (51%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D L+ V+H+++DE+HER+L D L+ V+KDLL +S LKVILMSAT+++
Sbjct: 318 WLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS-----DLKVILMSATLNAE 372
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNN-- 122
FS YFG+CP+I G T PV Y LEDV E I Y + +++ G VN
Sbjct: 373 KFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRY-VPEQKEHRSQFKRGFMQGHVNRQE 431
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV 182
+ K+ + W D Y+ T ++ + +D +D +L+ L+
Sbjct: 432 KEEKEAIYKERWPD-------YVRELRRRYSAS-----TVDVIEMMEDDKVDLNLIVALI 479
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
++ +GAILVFLPG I L D L + F
Sbjct: 480 RYIVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF 514
Score = 240 (89.5 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
Identities = 62/183 (33%), Positives = 99/183 (54%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
N+ +++ I+KA++CAGLYP VA L RK K DG V +
Sbjct: 808 NINSDNEKIIKAVICAGLYPKVAKIRLN-----LGKKRKMVKVYTKT-----DGL--VAV 855
Query: 617 HPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTI- 675
HP S+N + F + +L++ K+ T+ ++L D T VSP+ +L FGG I++Q Q TI
Sbjct: 856 HPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDNDQETIA 915
Query: 676 -DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTIANN-EVVKSMIQLLLE 729
D W+ +PA+ A L KELR L +L++ I +P N T + + V+ ++I L+
Sbjct: 916 VDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVDWNDTKSRDCAVLSAIIDLIKT 975
Query: 730 EDK 732
++K
Sbjct: 976 QEK 978
>TAIR|locus:2052841 [details] [associations]
symbol:HVT1 "helicase in vascular tissue and tapetum"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] InterPro:IPR001374
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00393 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 IPI:IPI00521007
RefSeq:NP_850154.2 UniGene:At.19969 ProteinModelPortal:F4INY4
SMR:F4INY4 PRIDE:F4INY4 EnsemblPlants:AT2G30800.1 GeneID:817631
KEGG:ath:AT2G30800 OMA:PYNNVST Uniprot:F4INY4
Length = 1299
Score = 639 (230.0 bits), Expect = 6.7e-86, Sum P(3) = 6.7e-86
Identities = 143/367 (38%), Positives = 209/367 (56%)
Query: 168 LNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA 227
+N + +D L++ L+ + +GAILVFLPG +I+ RL + F + ++
Sbjct: 528 INPEQVDVSLIQQLMRKICGDSEDGAILVFLPGWDDINKTRQRLLENPFFADSAKFDIIC 587
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
LHS V + +QKKVF RPP RK+++ATNIAE+++TIDDVVYV D GR KE Y+ +
Sbjct: 588 LHSMVPAGEQKKVFNRPPPGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNNV 647
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S++ W+S +PGICY LY+R R M ++VPE++RMP+ ELCLQ
Sbjct: 648 STLQSSWVSKANAKQRQGRAGRCQPGICYHLYSRLRAAS-MPDFKVPEIKRMPVEELCLQ 706
Query: 348 IKLLSLG-RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
+K+L + FL K L+PP +++I A+S+L ++GA+ EELT LG LPV L
Sbjct: 707 VKILDPNCKTNDFLQKLLDPPVDQSIANALSILQDIGALTPQEELTELGEKFGHLPVHPL 766
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
I KM+ F + CL P L+++ YK PF P VER K A +L L +
Sbjct: 767 ISKMLFFAVLVNCLDPALTLACAADYKEPFTMPMSP---VERQKAAAAKLELASLCGGD- 822
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
SDHL ++ A++ W+ +G + +FCS+YF+S S M M+ MR Q + L
Sbjct: 823 ----SDHLAVVAAFECWKNA---KGRGLSAEFCSQYFVSPSAMKMLDQMRSQLESELKRH 875
Query: 527 GLINLPN 533
G+I PN
Sbjct: 876 GII--PN 880
Score = 217 (81.4 bits), Expect = 6.7e-86, Sum P(3) = 6.7e-86
Identities = 41/83 (49%), Positives = 58/83 (69%)
Query: 11 NLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYF 70
+++ +TH+IVDE+HER DF+L +++DLL P L++ILMSAT+D+ FS YF
Sbjct: 303 SVSDITHIIVDEIHERDCYSDFMLAIIRDLLPSN-----PHLRLILMSATLDAERFSGYF 357
Query: 71 GDCPVITAEGRTHPVTTYFLEDV 93
G CPV+ G T+PV T +LEDV
Sbjct: 358 GGCPVVRVPGFTYPVRTLYLEDV 380
Score = 67 (28.6 bits), Expect = 6.7e-86, Sum P(3) = 6.7e-86
Identities = 31/113 (27%), Positives = 46/113 (40%)
Query: 565 IVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQ 624
I++A+L GLYP V G A N R++ A V VH ++ N
Sbjct: 894 ILRAVLAVGLYPMV-----GRLCPAFGNNRRTIVETASGAKV------RVHSLSNNFNLS 942
Query: 625 LKSFEHPFLVFLEKVETNK-VFLRDTTIVSPFSILLFGGSINVQHQTGQVTID 676
K ++ LVF E + + +R+ T+ +LL I V TG D
Sbjct: 943 SKKYDESLLVFDEITRGDGGMHIRNCTVARDLPLLLISTEIAVA-PTGSSDSD 994
Score = 48 (22.0 bits), Expect = 3.6e-68, Sum P(3) = 3.6e-68
Identities = 23/90 (25%), Positives = 38/90 (42%)
Query: 37 LKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
LK++ + +S K + SA V+SN G+ T G+T V Y L+ ++ S
Sbjct: 177 LKEITKLRSKLPITSFKDAITSA-VESNQVILISGE----TGCGKTTQVPQYLLDHMWSS 231
Query: 97 INYRLALDSAAAIRYEASSKSGPVNNRRGK 126
+ R A S S ++ RG+
Sbjct: 232 KRETCKIVCTQPRRISAMSVSERISCERGE 261
Score = 40 (19.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 9/17 (52%), Positives = 13/17 (76%)
Query: 201 VAEIHILLDRLAASYRF 217
VA+++IL +RL AS F
Sbjct: 1061 VAQMYILRERLMASILF 1077
>ASPGD|ASPL0000008624 [details] [associations]
symbol:AN5839 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GO:GO:0008026 OrthoDB:EOG4TXG12 RefSeq:XP_663443.1
EnsemblFungi:CADANIAT00007203 GeneID:2870747 KEGG:ani:AN5839.2
HOGENOM:HOG000213693 OMA:KNIRRAI Uniprot:Q5B0U1
Length = 1436
Score = 642 (231.1 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 155/443 (34%), Positives = 240/443 (54%)
Query: 159 EQTRQNLKRLNEDVIDYDLLEDLVCHVDETCGE-----GAILVFLPGVAEIHILLDRLAA 213
+QTR+ + +E +DY L++ L+ + T E AILVFLPG+AEI L D L +
Sbjct: 883 KQTRETIMNFDEYRLDYQLIKKLLMKL-ATAPEMEYYSKAILVFLPGMAEIRRLNDELLS 941
Query: 214 SYRFGGPSSDWLL-ALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFD 272
F W++ ALHSS+AS +Q+K F+ PP+ +RK++IATNIAET ITI D+ V D
Sbjct: 942 EPTF---QHGWIIHALHSSIASDEQEKAFVVPPDGMRKIVIATNIAETGITIPDITAVID 998
Query: 273 CGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQ 332
G+ K R++ +++LS +VE +IS V+ GIC+ ++T+HR++ L+ Q
Sbjct: 999 AGKEKTMRFDERRQLSRLVEAFISRANAKQRRGRAGRVQRGICFHMFTKHRHDNLLAEQQ 1058
Query: 333 VPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT 392
PEM R+ L +L L++K+ LG ++ L +AL+PP + I AI L EV A+ E LT
Sbjct: 1059 TPEMLRLSLQDLVLRVKICKLGEVEPTLLEALDPPSSKNIRRAIDALKEVKALTSTENLT 1118
Query: 393 PLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLA 452
PLG LAKLP+DV +GK+++ G F CL +SI+A LS KSPF+ E +L
Sbjct: 1119 PLGQQLAKLPLDVFLGKLIIHGAFFKCLDAAISIAAILSCKSPFVNTMGSNAQKEAVRLG 1178
Query: 453 LLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQ--FCSKYFLSSSVMY 510
G SD L + AY W++ R T A + FC K FLS +
Sbjct: 1179 FR----RG---------DSDLLTVYNAYCAWKRT---RSTPGANEYAFCRKNFLSPQTLL 1222
Query: 511 MIRDMRIQFGTLLADIGLINLP-NKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAI 569
I D+++Q +AD GL+ L N+ + + + F + + ++++++
Sbjct: 1223 NIEDVKLQLMVSIADAGLVTLDTNQKASLNRARSTRQRHFFTTPPSHDTNNANDTLIQSV 1282
Query: 570 LCAGLYPNVAATEQGVAGAALSN 592
+ YP + T +G ++N
Sbjct: 1283 IAWSFYPKLL-TREGKGWRNIAN 1304
Score = 232 (86.7 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 50/95 (52%), Positives = 63/95 (66%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+ + +THV++DEVHERS+ DFLLIVL+ L++K+ LK+ILMSATVD+N
Sbjct: 758 LERPDDFQDITHVVLDEVHERSIDSDFLLIVLRRLMQKRQ-----DLKLILMSATVDANR 812
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYR 100
FS Y G PV+ GRT PV T FLED E YR
Sbjct: 813 FSTYLGGVPVLNIPGRTFPVETKFLEDAIELTQYR 847
Score = 50 (22.7 bits), Expect = 1.2e-85, Sum P(3) = 1.2e-85
Identities = 23/109 (21%), Positives = 52/109 (47%)
Query: 612 REVHIHPSSIN------SQLKSFEHPFLVFLEKVE-TNKVFLR-DTTIVSPFSILLFGGS 663
+ V +HP+S+N S+ + +L + ++ N+ + +T+ V +++ + G
Sbjct: 1306 QSVTLHPTSVNRVPSASSERSPGQSQYLSYYHIMQGRNRKYNAFETSAVEDWAVAVLCGE 1365
Query: 664 INVQHQTGQVTID-GWLKVTAPAQTAVL-FKELRLTLHSILRQMIRNPQ 710
+ + G ++ID L+ + ++L K L + IL + R+PQ
Sbjct: 1366 GDFKMYPGVLSIDTNRLRFSLRDWKSMLAMKVLATRIREILANVFRDPQ 1414
>ZFIN|ZDB-GENE-070912-171 [details] [associations]
symbol:dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide
9" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 ZFIN:ZDB-GENE-070912-171
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063
GeneTree:ENSGT00550000074257 HOVERGEN:HBG039429 OrthoDB:EOG4HHP1J
OMA:DDWIRLQ EMBL:BX571812 IPI:IPI00491874 UniGene:Dr.79297
SMR:B0S6Z1 Ensembl:ENSDART00000111661 Ensembl:ENSDART00000134918
Uniprot:B0S6Z1
Length = 1271
Score = 541 (195.5 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 130/368 (35%), Positives = 202/368 (54%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGG 219
+T++ + +LNE ++L+E L+ +++ GA+LVFLPG I+ + L + FGG
Sbjct: 625 ETKRAMSQLNEKETSFELIEALLKYIETLEVPGAVLVFLPGWNLIYFMQKHLEMNPHFGG 684
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
+L LHS + +Q++VF P+ + KVI++TNIAETSITI+DVV+V D + K
Sbjct: 685 HQYR-ILPLHSQIPREEQRRVFEPVPDGVTKVILSTNIAETSITINDVVFVLDSCKQKVK 743
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
+ S +++ W S V+PG C+ L +R R+EKL + PE+ R
Sbjct: 744 LFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFEKL-ETHMTPEIFRT 802
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
PL E+ L IKLL LG I FLSKA+EPP +A+ A L E+ A++ ++ELTPLG LA
Sbjct: 803 PLHEVALSIKLLRLGGIGNFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILA 862
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLE 459
KLP++ +GKMM+ G IF + +ISA + PFI N E +L +
Sbjct: 863 KLPIEPRLGKMMIMGCIFNVGDAVCTISAATCFPEPFI-------N-EGKRLGFVHRNFA 914
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
G S SDH+ L+ ++ W ++ + G A +FC L+ + M + ++Q
Sbjct: 915 G-------SRFSDHVALLSVFQAWDEVRVG-GEDAEIRFCEHKRLNMPTLRMTWEAKVQL 966
Query: 520 GTLLADIG 527
+L ++G
Sbjct: 967 KEILVNVG 974
Score = 235 (87.8 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 44/91 (48%), Positives = 64/91 (70%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ A+ P ++VILMSAT+D+ +F
Sbjct: 506 ESGIRGISHVIVDEIHERDINTDFLLVVLRDVVQ---AY--PDVRVILMSATIDTTMFKE 560
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CPVI GR HPV YFLED + +
Sbjct: 561 YFFNCPVIEVHGRAHPVQEYFLEDCIQMTQF 591
Score = 138 (53.6 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 57/214 (26%), Positives = 100/214 (46%)
Query: 529 INLPNKNQTGGKK---KDDL-DSWFSDE---SQMFNMYA--NHSSIVKAILCAGLYPNVA 579
+N+P T K K+ L + F +E +Q+FN N+ +V ++L G YPNV
Sbjct: 951 LNMPTLRMTWEAKVQLKEILVNVGFPEECLLNQVFNNVGPDNNLDLVISLLTFGSYPNVC 1010
Query: 580 ATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKS----FEHPFLVF 635
++ RK + +GR + IH SS+N + + PF VF
Sbjct: 1011 YHKEK---------RKILTT---------EGRNAL-IHKSSVNCPFSNHDLKYPSPFFVF 1051
Query: 636 LEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELR 695
EK+ T + + T+VSP ++LFG S + V +D W+K+ P A LR
Sbjct: 1052 GEKIRTRAISAKSMTLVSPLQLILFG-SKKITSNGEVVELDDWIKLQIPHDVAAGVAGLR 1110
Query: 696 LTLHSILRQMIRNPQ--NSTIANNEVVKSMIQLL 727
L +++ ++ ++P+ + NE + ++I+L+
Sbjct: 1111 AGLEALVVEVTKDPEYIRNLDPLNERLLNVIRLV 1144
Score = 41 (19.5 bits), Expect = 2.5e-64, Sum P(3) = 2.5e-64
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIV 36
+ Q +KN T + V H RS + + + V
Sbjct: 195 FFQKEKNQTDYKYSQVGPDHNRSFIAEMTIFV 226
Score = 38 (18.4 bits), Expect = 3.5e-74, Sum P(3) = 3.5e-74
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 521 TLLADIGLINLPNKNQTGGKKKDDLDSW 548
TL++ + LI +K T + +LD W
Sbjct: 1066 TLVSPLQLILFGSKKITSNGEVVELDDW 1093
>FB|FBgn0002774 [details] [associations]
symbol:mle "maleless" species:7227 "Drosophila melanogaster"
[GO:0005700 "polytene chromosome" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;TAS] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0000785 "chromatin"
evidence=IDA] [GO:0007549 "dosage compensation"
evidence=NAS;IMP;TAS] [GO:0009047 "dosage compensation by
hyperactivation of X chromosome" evidence=NAS] [GO:0045433 "male
courtship behavior, veined wing generated song production"
evidence=IGI] [GO:0016456 "X chromosome located dosage compensation
complex, transcription activating" evidence=NAS;TAS] [GO:0005694
"chromosome" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0016457 "dosage
compensation complex assembly involved in dosage compensation by
hyperactivation of X chromosome" evidence=TAS] [GO:0003724 "RNA
helicase activity" evidence=NAS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0048675 "axon extension" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0000805 "X chromosome" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0005665 "DNA-directed RNA polymerase II, core
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 EMBL:AE013599 GO:GO:0005524 GO:GO:0008340
Gene3D:3.30.160.20 GO:GO:0045944 GO:GO:0000785 GO:GO:0003682
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045433 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0048675 GO:GO:0003724
GeneTree:ENSGT00550000074257 KO:K13184 OMA:DDWIRLQ GO:GO:0016456
EMBL:M74121 EMBL:BT003785 EMBL:BT010267 PIR:B40025
RefSeq:NP_476641.1 RefSeq:NP_724440.1 UniGene:Dm.2901
ProteinModelPortal:P24785 SMR:P24785 IntAct:P24785 MINT:MINT-768581
STRING:P24785 PaxDb:P24785 PRIDE:P24785 EnsemblMetazoa:FBtr0086031
GeneID:35523 KEGG:dme:Dmel_CG11680 CTD:35523 FlyBase:FBgn0002774
InParanoid:P24785 OrthoDB:EOG47H44V PhylomeDB:P24785
GenomeRNAi:35523 NextBio:793836 Bgee:P24785 GermOnline:CG11680
GO:GO:0016457 Uniprot:P24785
Length = 1293
Score = 552 (199.4 bits), Expect = 1.7e-83, Sum P(3) = 1.7e-83
Identities = 139/371 (37%), Positives = 205/371 (55%)
Query: 159 EQTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFG 218
++TR + L+E + ++LLE L+ H+ GAILVFLPG I L+ L + FG
Sbjct: 621 QKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFG 680
Query: 219 GPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKE 278
S +L HS + +Q+KVF PE + K+I++TNIAETSITIDD+V+V D + +
Sbjct: 681 DTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARM 740
Query: 279 NRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQR 338
+ S L+S W S V+PG C++L +R R++ L PEM R
Sbjct: 741 KLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQAL-EDNLTPEMFR 799
Query: 339 MPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHL 398
PL E+ L IKLL LG I FLSKALEPP +A+ A +L E+ ++ ++ELTPLG L
Sbjct: 800 TPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLL 859
Query: 399 AKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPF--IYPKDEKQNVERAKLALLTD 456
A+LP++ +GKMM+ G +FGC + +++I A SY S F ++ D + + +LA
Sbjct: 860 ARLPIEPRLGKMMVLGAVFGC-ADLMAIMA--SYSSTFSEVFSLD----IGQRRLANHQK 912
Query: 457 KLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMR 516
L G + SDH+ ++VA + W++ +RG +FC L S M +I D +
Sbjct: 913 ALSG-------TKCSDHVAMIVASQMWRREK-QRGEHMEARFCDWKGLQMSTMNVIWDAK 964
Query: 517 IQFGTLLADIG 527
Q LL G
Sbjct: 965 QQLLDLLQQAG 975
Score = 232 (86.7 bits), Expect = 1.7e-83, Sum P(3) = 1.7e-83
Identities = 43/91 (47%), Positives = 63/91 (69%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ L GV+H+IVDE+HER + DFLL++L+D+++ P L VILMSAT+D+ FS+
Sbjct: 495 EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTY-----PDLHVILMSATIDTTKFSK 549
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YFG CPV+ GR PV +FLED+ + ++
Sbjct: 550 YFGICPVLEVPGRAFPVQQFFLEDIIQMTDF 580
Score = 119 (46.9 bits), Expect = 1.7e-83, Sum P(3) = 1.7e-83
Identities = 30/99 (30%), Positives = 49/99 (49%)
Query: 616 IHPSSIN-SQLK-SFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGG-SINVQHQTGQ 672
+H +S+N S L +F +PF VF EK+ T V + ++VSP ++LFG I++
Sbjct: 1031 LHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMVSPLQVILFGSRKIDLA-ANNI 1089
Query: 673 VTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQN 711
V +D WL + A L+ L ++ NP +
Sbjct: 1090 VRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNPSD 1128
Score = 89 (36.4 bits), Expect = 9.9e-27, Sum P(3) = 9.9e-27
Identities = 32/118 (27%), Positives = 54/118 (45%)
Query: 467 SSTQ-SDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLAD 525
S T+ SDH+ ++VA + W++ +RG +FC L S M +I D + Q LL
Sbjct: 915 SGTKCSDHVAMIVASQMWRREK-QRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQ 973
Query: 526 IGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
G P + + + +D D+ + + A+LC GLYPN+ ++
Sbjct: 974 AGF---PEECMISHEVDERIDG---DDPVL--------DVSLALLCLGLYPNICVHKE 1017
>UNIPROTKB|G4MR96 [details] [associations]
symbol:MGG_04709 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
EMBL:CM001231 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003710833.1
EnsemblFungi:MGG_04709T0 GeneID:2677908 KEGG:mgr:MGG_04709
Uniprot:G4MR96
Length = 1504
Score = 643 (231.4 bits), Expect = 6.7e-83, Sum P(2) = 6.7e-83
Identities = 160/501 (31%), Positives = 265/501 (52%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHV--DETCGE--GAILVFLPGVAEIHILLDRLAASY 215
+TR L +++E ID+DL+ L+ + D + AILVFLPG+AEI L D L
Sbjct: 932 RTRNTLAQMDEYKIDFDLIVQLISRIASDPNYQDYSKAILVFLPGIAEIRTLNDLLLGDR 991
Query: 216 RFGGPSSDWLL-ALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCG 274
F +WL+ LHS++A+ +Q+ FL PP +RK+++ATNIAET ITI DV V D G
Sbjct: 992 SF---QQNWLVYPLHSTIATEEQEAAFLVPPHGMRKIVLATNIAETGITIPDVTCVIDTG 1048
Query: 275 RHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVP 334
+H+E R++ ++++S +++ +IS V+ G+C+ ++T++R++ +M Q P
Sbjct: 1049 KHREMRFDERRQMSRLIDTFISRANAKQRRGRAGRVQQGLCFHMFTKYRHDAIMADQQTP 1108
Query: 335 EMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPL 394
EM R+ L +L +++K+ +G I+ LSKAL+PP + I AI L +V A+ E+LTPL
Sbjct: 1109 EMLRLSLQDLAIRVKICKIGGIEETLSKALDPPSAKNIRRAIDALIDVRALTQGEDLTPL 1168
Query: 395 GHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALL 454
G+ LA+LP+DV +GK++L G IF CL ++++A LS KSPF+ P ++ + +L
Sbjct: 1169 GNQLARLPLDVFLGKLILLGSIFKCLDMAITVAAILSSKSPFVAPFGQRSQADTVRLGFR 1228
Query: 455 TDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQ--QFCSKYFLSSSVMYMI 512
G SD L + AY W+++ L ++Q QFC K FLS + I
Sbjct: 1229 ----RG---------DSDILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANI 1275
Query: 513 RDMRIQFGTLLADIGLINLPN---KN------QTGGKKKDDLDSWFSDESQMFNMYANHS 563
D++ Q L D +++ KN +GG ++ F + Q ++ + +
Sbjct: 1276 EDLKGQLLVSLVDSKFLSMTEDERKNLSRLRYASGGNRRRK--QVFFEMPQRVDVNSEND 1333
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSN------SAAKAHPV--WYDGRREVH 615
+ +A+L YP + + G L N+ + N S + H W +
Sbjct: 1334 LVSQAVLSWSFYPKLLVRDVA-GGKGLRNVGNNQNISLHRSSVNRGHNEIRWMSYYHMMQ 1392
Query: 616 IHPSSINSQLKSFEHPFLVFL 636
S++N+ + PF + L
Sbjct: 1393 STKSALNAHETTAVEPFAIAL 1413
Score = 231 (86.4 bits), Expect = 6.7e-83, Sum P(2) = 6.7e-83
Identities = 56/130 (43%), Positives = 77/130 (59%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+G +L +TH+++DEVHERS+ DFLLIVLK L+ ++ LKV+LMSATVD++
Sbjct: 804 LEGSNDLRDITHLVLDEVHERSIDSDFLLIVLKKLMTRRK-----DLKVVLMSATVDADR 858
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY---------RLA-LDSAAAIRYEASS 115
FS Y PV+ GRT PV FLED E Y RL +D A + E+SS
Sbjct: 859 FSNYLDGAPVLNVPGRTFPVQVNFLEDAVELTGYTIDQKVPQERLVEIDEDAEVEPESSS 918
Query: 116 KSGPVNNRRG 125
K+ + + +G
Sbjct: 919 KTELLKSLKG 928
Score = 148 (57.2 bits), Expect = 3.8e-25, Sum P(2) = 3.8e-25
Identities = 61/252 (24%), Positives = 109/252 (43%)
Query: 471 SDHLVLMVAYKKWQKILLKRGTKAAQ--QFCSKYFLSSSVMYMIRDMRIQFGTLLADIGL 528
SD L + AY W+++ L ++Q QFC K FLS + I D++ Q L D
Sbjct: 1232 SDILTVYNAYLSWKRVCLAATGNSSQEFQFCRKNFLSQQTLANIEDLKGQLLVSLVDSKF 1291
Query: 529 INLPN---KNQTGGKKKDDLD----SWFSDESQMFNMYANHSSIVKAILCAGLYPNVAAT 581
+++ KN + + + F + Q ++ + + + +A+L YP +
Sbjct: 1292 LSMTEDERKNLSRLRYASGGNRRRKQVFFEMPQRVDVNSENDLVSQAVLSWSFYPKLLVR 1351
Query: 582 EQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVET 641
+ VAG LR N+ + + +H SS+N ++ + +++
Sbjct: 1352 D--VAGG--KGLRNVGNN------------QNISLHRSSVNRGHNEIR--WMSYYHMMQS 1393
Query: 642 NKVFLR--DTTIVSPFSILLFGGSINVQHQTGQVTIDG-WLKVTAPA-QTAVLFKELRLT 697
K L +TT V PF+I L G + +G +DG + AP +T ++ K LR
Sbjct: 1394 TKSALNAHETTAVEPFAIALLCGDVRCDMYSGVFVMDGNRARFAAPDWKTVLVVKTLRSR 1453
Query: 698 LHSILRQMIRNP 709
L +L + +NP
Sbjct: 1454 LRELLTRSFKNP 1465
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 378 VLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGK 409
++ E G DE E+ L +AK+ +DVL K
Sbjct: 335 LVVENGQSSSDELEIAKLQAKIAKIELDVLFEK 367
>DICTYBASE|DDB_G0275313 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0275313 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GenomeReviews:CM000151_GR EMBL:AAFI02000013
GO:GO:0003725 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 RefSeq:XP_643861.1 ProteinModelPortal:Q869Z1
EnsemblProtists:DDB0233740 GeneID:8619912 KEGG:ddi:DDB_G0275313
InParanoid:Q869Z1 OMA:CEYLLEN Uniprot:Q869Z1
Length = 1472
Score = 599 (215.9 bits), Expect = 1.6e-82, Sum P(3) = 1.6e-82
Identities = 148/421 (35%), Positives = 234/421 (55%)
Query: 171 DVIDYDLLEDLVCHVD---ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA 227
D +D++++ L+ H+ + E +IL+FLPG +I + + + +L
Sbjct: 926 DDVDHEMILQLIVHIVTKVSSTSEDSILIFLPGWEDISQTRELMRRHPMLRNENEFLILP 985
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
LHSSV+ Q KVF +PP KIRK++++TNIAETSITI+DVVYV D + K + +Q+ L
Sbjct: 986 LHSSVSMQLQAKVFEKPPPKIRKIVLSTNIAETSITINDVVYVIDSAKVKLKYHETQRDL 1045
Query: 288 SSMVEDWISXXXXXXXXXXXXXV-KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCL 346
+ W V K G+CY + +R RY L +Q+ EM+RMPL ELCL
Sbjct: 1046 TLFQTVWACKSSLKQRRGRAGRVRKDGVCYHMVSRDRYNTL-EEFQLSEMRRMPLHELCL 1104
Query: 347 QIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
Q+K+L LG + FLS+ALEPP+ ++I AI++L ++GA+ ++ELTPLG L+ +PVD
Sbjct: 1105 QVKVLVLGDVIGFLSEALEPPETKSIDNAINLLIDLGALNANQELTPLGLQLSFIPVDPR 1164
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPF--IYPK---DEKQNVERAKLALLTDKLEGL 461
IGKM++ G F CL PIL+I++F + K+P +Y + + N + + +
Sbjct: 1165 IGKMIILGSYFRCLDPILTIASFSNQKNPITTLYNQGNDNNNNNNNNNNNSYYNNYYQQQ 1224
Query: 462 SDSNDS---STQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQ 518
+ QSDHL + + W + + GT+ Q+C FLS ++ I ++ Q
Sbjct: 1225 PQQPKNLYPELQSDHLSFLNIFNGWLQSRMD-GTE--DQYCQD-FLSIPLLQQILKVKKQ 1280
Query: 519 FGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNV 578
+ + D+G+IN L F + S FN +N+ I++AI+C+GL+PN+
Sbjct: 1281 LLSTINDLGIINA------------QLRDGFVNNS-FFNENSNNLDIIRAIICSGLFPNI 1327
Query: 579 A 579
A
Sbjct: 1328 A 1328
Score = 211 (79.3 bits), Expect = 1.6e-82, Sum P(3) = 1.6e-82
Identities = 45/93 (48%), Positives = 58/93 (62%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ D L V+H+ +DEVHER + DFLLI+LK LL D L+VILMSAT+D++L
Sbjct: 827 MYSDMKLHNVSHLFIDEVHERDIHTDFLLIILKKLLA-----DNNNLRVILMSATMDNSL 881
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESIN 98
S YFG CPVI H YFLED+ + +N
Sbjct: 882 VSAYFGTCPVIKLTSYHHIAQEYFLEDISKQLN 914
Score = 86 (35.3 bits), Expect = 1.6e-82, Sum P(3) = 1.6e-82
Identities = 36/123 (29%), Positives = 60/123 (48%)
Query: 616 IHPSSINSQLKSFEHP---FLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQ 672
+HPSSI L +P +++F EK +T F++ T + S+LLFG S + +QT
Sbjct: 1345 LHPSSIVYNLFQELNPKENWVIFEEKFKTKLTFIKTITRIPEISLLLFG-STPIFNQTST 1403
Query: 673 ----VTIDGW-LKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ--NS-TIANNEVVKSMI 724
V+I+G +K P + L +R + L++ I NS + + E K ++
Sbjct: 1404 ENSTVSINGTQIKFYIPTLSCHLLLSIREQMEKSLQKYIEQSDYSNSFSKTDYEFQKCLM 1463
Query: 725 QLL 727
LL
Sbjct: 1464 ALL 1466
>FB|FBgn0032883 [details] [associations]
symbol:CG9323 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002151 "G-quadruplex RNA binding"
evidence=IDA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0002151
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GeneTree:ENSGT00550000074257 KO:K14442 EMBL:AY095176
RefSeq:NP_610056.1 UniGene:Dm.11353 SMR:Q8SWT2 MINT:MINT-935813
EnsemblMetazoa:FBtr0081459 GeneID:35339 KEGG:dme:Dmel_CG9323
UCSC:CG9323-RA FlyBase:FBgn0032883 InParanoid:Q8SWT2 OMA:PLGMHLA
OrthoDB:EOG4HQC07 GenomeRNAi:35339 NextBio:793041 Uniprot:Q8SWT2
Length = 942
Score = 542 (195.9 bits), Expect = 1.9e-82, Sum P(3) = 1.9e-82
Identities = 136/382 (35%), Positives = 201/382 (52%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPG---VAEIHILLDRLAASYRFGGPSSDWL 225
+E D D + DLV ++ E EGAILVFLPG +++++ +LD+ S +
Sbjct: 400 SEGCEDIDFIADLVYYICENEPEGAILVFLPGYDKISQLYNILDKPKTSKGQRWRDHMAV 459
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
LHS + S +Q+ VF RPP RKVII+T IAETS+TIDDVVYV + GR K Y+ +
Sbjct: 460 FPLHSLMQSGEQQAVFRRPPAGQRKVIISTIIAETSVTIDDVVYVINSGRTKATNYDIET 519
Query: 286 KLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
+ S+ E W++ V+PGICY+L++R R ++ M PE+ R L +
Sbjct: 520 NIQSLDEVWVTKANTQQRRGRAGRVRPGICYNLFSRAREDR-MDDIPTPEILRSKLESII 578
Query: 346 LQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDV 405
L +KLL + FL + P EAI + +L + A++ LTPLG HLAKLP+D
Sbjct: 579 LSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLKRIEALDQTGTLTPLGMHLAKLPIDP 638
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSN 465
+GKM+L +F CL PI S +A LS+KSPF P ++ V+ K + +
Sbjct: 639 QMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESRVDEIKRRMARNM-------- 690
Query: 466 DSSTQSDHLVL---MVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTL 522
+SDHL++ ++AY+ R + A + FC K FLSS + + M+ QF L
Sbjct: 691 ----RSDHLMVHNTIIAYRD------SRYSHAERDFCYKNFLSSMTLQQLERMKNQFSEL 740
Query: 523 LADIGLINLPNKNQTGGKKKDD 544
L + + N K +
Sbjct: 741 LYNYKFLASSNCKDAASNKNSE 762
Score = 173 (66.0 bits), Expect = 1.9e-82, Sum P(3) = 1.9e-82
Identities = 41/94 (43%), Positives = 55/94 (58%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D + ++ +I+DE+HERS+ D L+ +LK +L + P LKVILMSATV
Sbjct: 263 LQSDPLMHNLSVLILDEIHERSVETDLLMGLLKVILPHR-----PDLKVILMSATVREQD 317
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F YF +CP+ EG PV +LEDV NY
Sbjct: 318 FCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNY 351
Score = 166 (63.5 bits), Expect = 1.9e-82, Sum P(3) = 1.9e-82
Identities = 47/172 (27%), Positives = 85/172 (49%)
Query: 565 IVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQ 624
+++AI+ AGLYPN+A L R+ N H + D R V+ HPSS+NS
Sbjct: 766 LLRAIIGAGLYPNMAH---------LRKSRQIKNRVRAIHTMATDDGRRVNFHPSSVNSG 816
Query: 625 LKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSIN--VQHQTGQVTIDGWLKVT 682
F+ + V+ ++ ++ +FL D+T+V P ++++FG + V T + +
Sbjct: 817 ESGFDSAYFVYFQRQKSTDLFLLDSTMVFPMALIIFGDGVEAGVTQNTPYLCVAKTYYFK 876
Query: 683 APAQTAVLFKELRLTLHSIL--RQMIRNPQNSTIANNEVVKSMIQLLLEEDK 732
+TA + +LR L +L + + P +++K+ I+LLL D+
Sbjct: 877 CNRETADVVIQLRSNLEKLLLKKALYPAPIEENGYEKQLIKA-IELLLSLDE 927
Score = 44 (20.5 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 17/71 (23%), Positives = 35/71 (49%)
Query: 461 LSDSNDSSTQSDHLV----LMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMR 516
L + ++ S ++D L+ +++ ++ K++L T Q FC YF ++ M+ I +
Sbjct: 277 LDEIHERSVETDLLMGLLKVILPHRPDLKVILMSATVREQDFCD-YF-NNCPMFRIEGVM 334
Query: 517 IQFGTL-LADI 526
L L D+
Sbjct: 335 FPVKMLYLEDV 345
Score = 37 (18.1 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 166 KRLNEDVIDYDLLEDL 181
+RL ED I D ++D+
Sbjct: 927 ERLGEDYISSDEIDDI 942
>UNIPROTKB|E2QZR7 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882 OMA:RAFWESS
EMBL:AAEX03007702 Ensembl:ENSCAFT00000000357 Uniprot:E2QZR7
Length = 1376
Score = 591 (213.1 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 149/402 (37%), Positives = 227/402 (56%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDR-LAASYRFGGPSSDW-LL 226
+++ +D DL+ L+ ++ C + AIL+FLPG EI L DR L RF + + +
Sbjct: 600 DDEKVDLDLIMHLLYNICHGCHKCAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVF 659
Query: 227 ALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKK 286
LHS++ + DQKKV PP +RK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 660 MLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNF 719
Query: 287 LSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCL 346
++ + WIS +PGIC+ L++R R++ ++ +Q PE+ RMPL ELCL
Sbjct: 720 VTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLE-FQTPELLRMPLQELCL 778
Query: 347 QIKLLSLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
KLL+ I FL KA EPP + A+ +L + A++ E+LT LG+HLA LPV+
Sbjct: 779 HTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVE 838
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
+GKM+L + CL PIL+I+ L+Y+ PF+ P Q +RA A+L K
Sbjct: 839 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQ--KRA--AMLCRK------R 888
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF-GTLL 523
+ T SDH+ L+ A++ WQK R + FC K FLS + M +I MR Q G L
Sbjct: 889 FTAGTFSDHMALLRAFQAWQKA---RSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 945
Query: 524 ADIGLINLPNKNQTGGKKKD---DLDSWFSDESQMF-NMYAN 561
A G + + + GG +D + ++W ++ + MY N
Sbjct: 946 AS-GFV----RARGGGDIRDVNTNSENWAVVKAALVAGMYPN 982
Score = 240 (89.5 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 52/94 (55%), Positives = 61/94 (64%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLL L+DLL+K H P LK+IL SA +D NL
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQK---H--PTLKLILSSAALDVNL 355
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F RYFG CPVI +GR V FLED+ + Y
Sbjct: 356 FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 389
Score = 74 (31.1 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 498 FCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFN 557
FC K FLS + M +I MR Q L G + + + GG +D N
Sbjct: 919 FCEKNFLSQATMEIIIGMRTQLLGQLRASGFV----RARGGGDIRD------------VN 962
Query: 558 MYANHSSIVKAILCAGLYPNVAATEQ 583
+ + ++VKA L AG+YPN+ ++
Sbjct: 963 TNSENWAVVKAALVAGMYPNLVHVDR 988
Score = 59 (25.8 bits), Expect = 4.5e-82, Sum P(3) = 4.5e-82
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 675 IDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEV-VKSMIQLLLEEDK 732
+D WL + A L +LR HS+ + +R P +E ++++I +L E++
Sbjct: 1053 LDEWLNFKLDPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQ 1111
Score = 42 (19.8 bits), Expect = 1.2e-19, Sum P(4) = 1.2e-19
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 200 GVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
G EI LL+ +AS FG L+ + S S + +++
Sbjct: 551 GQTEIVDLLESYSASLEFGNLDESSLVHTNGSDLSAEDREL 591
Score = 38 (18.4 bits), Expect = 7.2e-80, Sum P(3) = 7.2e-80
Identities = 15/68 (22%), Positives = 28/68 (41%)
Query: 536 QTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRK 595
++ +K D+ FSDES A ++ L+P ++G+ S +
Sbjct: 1140 RSNNSRKTSADTEFSDES------ATAERVLMKSPSPALHPPQKYKDRGILHPKRSTDDR 1193
Query: 596 SSNSAAKA 603
S S+ K+
Sbjct: 1194 SDQSSVKS 1201
>UNIPROTKB|Q9H6S0 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 EMBL:AC093208 EMBL:AC010389 EMBL:BC137285
EMBL:AK025593 IPI:IPI00010200 RefSeq:NP_073739.3 UniGene:Hs.231942
PDB:2YU6 PDBsum:2YU6 ProteinModelPortal:Q9H6S0 SMR:Q9H6S0
IntAct:Q9H6S0 PhosphoSite:Q9H6S0 DMDM:239938805 PaxDb:Q9H6S0
PeptideAtlas:Q9H6S0 PRIDE:Q9H6S0 Ensembl:ENST00000161863
GeneID:64848 KEGG:hsa:64848 UCSC:uc003kqn.3 CTD:64848
GeneCards:GC05P112877 HGNC:HGNC:24721 HPA:HPA037364
neXtProt:NX_Q9H6S0 PharmGKB:PA134912676 HOGENOM:HOG000155703
HOVERGEN:HBG063891 InParanoid:Q9H6S0 OMA:RAFWESS OrthoDB:EOG4JWVCN
PhylomeDB:Q9H6S0 EvolutionaryTrace:Q9H6S0 GenomeRNAi:64848
NextBio:66962 ArrayExpress:Q9H6S0 Bgee:Q9H6S0 CleanEx:HS_YTHDC2
Genevestigator:Q9H6S0 GermOnline:ENSG00000047188 Uniprot:Q9H6S0
Length = 1430
Score = 617 (222.3 bits), Expect = 3.7e-81, Sum P(2) = 3.7e-81
Identities = 186/588 (31%), Positives = 291/588 (49%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDR-LAASYRFGGPSSDW-LL 226
+++ +D DL+ L+ ++ +C GA+L+FLPG EI L DR L RF + + +
Sbjct: 600 DDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVF 659
Query: 227 ALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKK 286
LHS++ + DQKKV PP +RK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 660 MLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNF 719
Query: 287 LSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCL 346
++ + WIS +PGIC+ L++R R++ ++ +Q PE+ RMPL ELCL
Sbjct: 720 VTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLE-FQTPELLRMPLQELCL 778
Query: 347 QIKLLSLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
KLL+ I FL KA EPP + A+ +L + A++ E+LT LG+HLA LPV+
Sbjct: 779 HTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPVE 838
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
+GKM+L + CL PIL+I+ L+Y+ PF+ P Q +RA A+L K
Sbjct: 839 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQ--KRA--AMLCRK------R 888
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF-GTLL 523
+ SDH+ L+ A++ WQK R + FC K FLS + M +I MR Q G L
Sbjct: 889 FTAGAFSDHMALLRAFQAWQKA---RSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 945
Query: 524 ADIGLINLPNKNQTGGKKKD---DLDSWFSDESQMF-NMYAN--HSSIVKAILCAGLYPN 577
A G + + + GG +D + ++W ++ + MY N H +L
Sbjct: 946 AS-GFV----RARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKK 1000
Query: 578 VAATEQGVAGAA-LSNLRKSSNSAA--KAHPV-W--YDGRREVHIHPSSINSQLKSFEHP 631
V V + ++ AA KA P W YD H N + S P
Sbjct: 1001 VRFHPASVLSQPQYKKIPPANGQAAAIKALPTDWLIYDEMTRAH---RIANIRCCSAVTP 1057
Query: 632 --FLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT----GQVTIDGWLKVTAPA 685
LVF L++ + I ++ +T + +D WL T
Sbjct: 1058 VTILVFCGPARLASNALQEPSSFRVDGIPNDSSDSEMEDKTTANLAALKLDEWLHFTLEP 1117
Query: 686 QTAVLFKELRLTLHSILRQMIRNPQNSTIANNEV-VKSMIQLLLEEDK 732
+ A L +LR HS+ + +R P +E ++++I +L E++
Sbjct: 1118 EAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQ 1165
Score = 240 (89.5 bits), Expect = 3.7e-81, Sum P(2) = 3.7e-81
Identities = 52/94 (55%), Positives = 61/94 (64%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLL L+DLL+K H P LK+IL SA +D NL
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQK---H--PTLKLILSSAALDVNL 355
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F RYFG CPVI +GR V FLED+ + Y
Sbjct: 356 FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 389
Score = 40 (19.1 bits), Expect = 6.4e-15, Sum P(2) = 6.4e-15
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 200 GVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
G EI LL+ +A+ FG L+ + S S + +++
Sbjct: 551 GQTEIVDLLESYSATLEFGNLDESSLVQTNGSDLSAEDREL 591
>MGI|MGI:2448561 [details] [associations]
symbol:Ythdc2 "YTH domain containing 2" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50088 PROSITE:PS51061
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
MGI:MGI:2448561 GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146 PROSITE:PS50882
CTD:64848 HOGENOM:HOG000155703 OMA:RAFWESS OrthoDB:EOG4JWVCN
EMBL:BC138263 EMBL:BC171951 IPI:IPI00343249 RefSeq:NP_001156485.1
UniGene:Mm.244482 ProteinModelPortal:B2RR83 SMR:B2RR83
PhosphoSite:B2RR83 PaxDb:B2RR83 PRIDE:B2RR83
Ensembl:ENSMUST00000037763 GeneID:240255 KEGG:mmu:240255
UCSC:uc008evb.2 InParanoid:B2RR83 ChiTaRS:YTHDC2 NextBio:384522
Bgee:B2RR83 Genevestigator:B2RR83 Uniprot:B2RR83
Length = 1445
Score = 617 (222.3 bits), Expect = 3.8e-81, Sum P(2) = 3.8e-81
Identities = 187/588 (31%), Positives = 291/588 (49%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDR-LAASYRFGGPSSDW-LL 226
+++ +D DL+ L+ ++ +C GAIL+FLPG EI L DR L RF + + +
Sbjct: 615 DDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVF 674
Query: 227 ALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKK 286
LHS++ + DQKKV PP +RK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 675 MLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNF 734
Query: 287 LSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCL 346
++ + WIS +PGIC+ L++R R++ ++ +Q PE+ RMPL ELCL
Sbjct: 735 VTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLE-FQTPELLRMPLQELCL 793
Query: 347 QIKLLSLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
KLL+ I FL KA EPP + A+ +L + A++ E+LT LG+HLA LPV+
Sbjct: 794 HTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVE 853
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
+GKM+L + CL PIL+I+ L+Y+ PF+ P Q +RA A+L K
Sbjct: 854 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQ--KRA--AMLCRK------R 903
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF-GTLL 523
+ T SDH+ L+ A++ WQK R + FC K FLS + M +I MR Q G L
Sbjct: 904 FTAGTFSDHMALLRAFQAWQKA---RSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 960
Query: 524 ADIGLINLPNKNQTGGKKKD---DLDSWFSDESQMF-NMYAN--HSSIVKAILCAGLYPN 577
A G + + + GG +D + ++W ++ + MY N H IL
Sbjct: 961 AS-GFV----RARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVILTGPKEKK 1015
Query: 578 VAATEQGVAGAA-LSNLRKSSNSAA--KAHPV-W--YDGRREVHIHPSSINSQLKSFEHP 631
V V + ++ AA +A P W YD H N + S P
Sbjct: 1016 VRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAH---RIANIRCCSAVTP 1072
Query: 632 F--LVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT----GQVTIDGWLKVTAPA 685
LVF L++ + I ++ +T + +D WL
Sbjct: 1073 VTVLVFCGPARLASNALQEPSSFRADGIPNDSSDSEMEDRTTANLAALKLDEWLNFKLEP 1132
Query: 686 QTAVLFKELRLTLHSILRQMIRNPQNSTIANNEV-VKSMIQLLLEEDK 732
+ A L +LR HS+ + +R P +E ++++I +L E++
Sbjct: 1133 EAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQ 1180
Score = 240 (89.5 bits), Expect = 3.8e-81, Sum P(2) = 3.8e-81
Identities = 52/94 (55%), Positives = 61/94 (64%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLL L+DLL+K H P LK+IL SA +D NL
Sbjct: 316 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQK---H--PTLKLILSSAALDVNL 370
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F RYFG CPVI +GR V FLED+ + Y
Sbjct: 371 FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 404
Score = 40 (19.1 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 200 GVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
G EI LL+ +AS FG L+ + + S + +++
Sbjct: 566 GQTEIVDLLESYSASLEFGNLDESSLVQTNGNDLSAEDREL 606
>UNIPROTKB|F1RLG0 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR002110 InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS50088
PROSITE:PS51194 SMART:SM00248 SMART:SM00490 SMART:SM00847
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:CU462841
Ensembl:ENSSSCT00000015529 Uniprot:F1RLG0
Length = 1151
Score = 611 (220.1 bits), Expect = 4.6e-81, Sum P(2) = 4.6e-81
Identities = 185/589 (31%), Positives = 290/589 (49%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDR-LAASYRFGGPSSD--WL 225
+++ +D DL+ L+ ++ +C GA+L+FLPG EI L DR L RF + +
Sbjct: 320 DDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNTHSRYQV 379
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
LHS++ + DQKKV PP +RK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 380 FMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 439
Query: 286 KLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
++ + WIS +PGIC+ L++R R++ ++ +Q PE+ RMPL ELC
Sbjct: 440 FVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLE-FQTPELLRMPLQELC 498
Query: 346 LQIKLLSLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L KLL+ I FL KA EPP + A+ +L + A++ E+LT LG+HLA LPV
Sbjct: 499 LHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPV 558
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ +GKM+L + CL PIL+I+ L+Y+ PF+ P Q +RA A+L K
Sbjct: 559 EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQ--KRA--AMLCRK------ 608
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF-GTL 522
+ T SDH+ L+ A++ WQK R + FC K FLS + M +I MR Q G L
Sbjct: 609 RFTAGTFSDHMALLRAFQAWQKA---RSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQL 665
Query: 523 LADIGLINLPNKNQTGGKKKD---DLDSWFSDESQMF-NMYAN--HSSIVKAILCAGLYP 576
A G + + + GG +D + ++W ++ + MY N H +L
Sbjct: 666 RAS-GFV----RARGGGDIRDVNTNSENWAVVKAALVAGMYPNLVHVDRENVVLTGPKEK 720
Query: 577 NVAATEQGVAGAA-LSNLRKSSNSAA--KAHPV-W--YDGRREVHIHPSSINSQLKSFEH 630
V V + ++ AA +A P W YD H N + S
Sbjct: 721 KVRFHPTSVLSQPQYKKIPPANGQAAAIQALPTDWLIYDEMTRAH---RIANIRCCSAVT 777
Query: 631 PF--LVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT----GQVTIDGWLKVTAP 684
P LVF L++ + I ++ +T + +D WL
Sbjct: 778 PVTVLVFCGPARLASNALQEPSSFRADGIPNDSSDSEMEDRTTANLATLKLDEWLSFKLE 837
Query: 685 AQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEV-VKSMIQLLLEEDK 732
+ A L +LR HS+ + +R P +E ++++I +L E++
Sbjct: 838 PEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDEATIRAIIAVLSTEEQ 886
Score = 240 (89.5 bits), Expect = 4.6e-81, Sum P(2) = 4.6e-81
Identities = 52/94 (55%), Positives = 61/94 (64%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLL L+DLL+K H P LK+IL SA +D NL
Sbjct: 21 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQK---H--PTLKLILSSAALDVNL 75
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F RYFG CPVI +GR V FLED+ + Y
Sbjct: 76 FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 109
Score = 43 (20.2 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 200 GVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
G EI LL+ +AS FG L+ + S S + +++
Sbjct: 271 GQTEIVDLLESYSASLEFGNLDESSLVQTNGSDLSAEDREL 311
Score = 37 (18.1 bits), Expect = 1.2e-14, Sum P(3) = 1.2e-14
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 536 QTGGKKKDDLDSWFSDES 553
++ +K D+ FSDES
Sbjct: 915 RSNNSRKSSADTEFSDES 932
>UNIPROTKB|G5E5N3 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 UniGene:Bt.5544 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:DAAA02043563 EMBL:DAAA02043564
Ensembl:ENSBTAT00000026409 Uniprot:G5E5N3
Length = 1287
Score = 522 (188.8 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 128/368 (34%), Positives = 197/368 (53%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGG 219
+TR ++ +LNE ++L+E L+ +++ GA+LVFLPG I+ + L + FG
Sbjct: 616 ETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 675
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
+L LHS + +Q+KVF P + K+I++TNIAETSITI+DVVYV D + K
Sbjct: 676 HRYQ-ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVK 734
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
+ + +++ W S V+PG C+ L +R R+E+L + PEM R
Sbjct: 735 LFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERL-ETHMTPEMFRT 793
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
PL E+ L IKLL LG I FL+KA+EPP +A+ A L E+ A++ ++ELTPLG LA
Sbjct: 794 PLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 853
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLE 459
KLP++ GKMM+ G IF I +ISA + PFI E +L +
Sbjct: 854 KLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS--------EGKRLGYIHRNFA 905
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
G + SDH+ L+ ++ W + G +A +FC L+ + + M + ++Q
Sbjct: 906 G-------NRFSDHVALLSVFQAWDDARMG-GEEAEIRFCEHKRLNMATLRMTWEAKVQL 957
Query: 520 GTLLADIG 527
+L + G
Sbjct: 958 KEILINSG 965
Score = 228 (85.3 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 41/91 (45%), Positives = 67/91 (73%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ A+ P+++++LMSAT+D+++F
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQ---AY--PEVRIVLMSATIDTSMFCE 550
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CP+I GRT PV YFLED + ++
Sbjct: 551 YFFNCPIIEVYGRTFPVQEYFLEDCIQMTHF 581
Score = 135 (52.6 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 545 LDSWFSDE---SQMFNMYA--NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNS 599
++S F +E +Q+F N+ +V ++L G+YPNV ++ RK +
Sbjct: 962 INSGFPEECLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEK---------RKILTT 1012
Query: 600 AAKAHPVWYDGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPF 655
+GR + IH SS+N SQ + PF VF EK+ T + + T+V+P
Sbjct: 1013 ---------EGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPL 1062
Query: 656 SILLFGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
+LLF S VQ V +D W+++ + A LR + +++ ++ + P
Sbjct: 1063 QLLLFA-SKKVQSDGQLVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQP 1115
>UNIPROTKB|Q28141 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9913
"Bos taurus" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] [GO:0030529 "ribonucleoprotein complex" evidence=ISS]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247063 EMBL:X82829 IPI:IPI00714708
PIR:I46032 RefSeq:NP_776461.1 UniGene:Bt.5544
ProteinModelPortal:Q28141 SMR:Q28141 STRING:Q28141 PRIDE:Q28141
GeneID:281115 KEGG:bta:281115 CTD:1660 HOVERGEN:HBG039429
InParanoid:Q28141 KO:K13184 OrthoDB:EOG4HHP1J NextBio:20805185
GO:GO:0070937 Uniprot:Q28141
Length = 1287
Score = 522 (188.8 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 128/368 (34%), Positives = 197/368 (53%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGG 219
+TR ++ +LNE ++L+E L+ +++ GA+LVFLPG I+ + L + FG
Sbjct: 616 ETRISMAQLNEKETPFELIEALLLYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 675
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
+L LHS + +Q+KVF P + K+I++TNIAETSITI+DVVYV D + K
Sbjct: 676 HRYQ-ILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVK 734
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
+ + +++ W S V+PG C+ L +R R+E+L + PEM R
Sbjct: 735 LFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERL-ETHMTPEMFRT 793
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
PL E+ L IKLL LG I FL+KA+EPP +A+ A L E+ A++ ++ELTPLG LA
Sbjct: 794 PLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 853
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLE 459
KLP++ GKMM+ G IF I +ISA + PFI E +L +
Sbjct: 854 KLPIEPRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS--------EGKRLGYIHRNFA 905
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
G + SDH+ L+ ++ W + G +A +FC L+ + + M + ++Q
Sbjct: 906 G-------NRFSDHVALLSVFQAWDDARMG-GEEAEIRFCEHKRLNMATLRMTWEAKVQL 957
Query: 520 GTLLADIG 527
+L + G
Sbjct: 958 KEILINSG 965
Score = 228 (85.3 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 41/91 (45%), Positives = 67/91 (73%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ A+ P+++++LMSAT+D+++F
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQ---AY--PEVRIVLMSATIDTSMFCE 550
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CP+I GRT PV YFLED + ++
Sbjct: 551 YFFNCPIIEVYGRTFPVQEYFLEDCIQMTHF 581
Score = 135 (52.6 bits), Expect = 1.2e-80, Sum P(3) = 1.2e-80
Identities = 47/174 (27%), Positives = 82/174 (47%)
Query: 545 LDSWFSDE---SQMFNMYA--NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNS 599
++S F +E +Q+F N+ +V ++L G+YPNV ++ RK +
Sbjct: 962 INSGFPEECLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKEK---------RKILTT 1012
Query: 600 AAKAHPVWYDGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPF 655
+GR + IH SS+N SQ + PF VF EK+ T + + T+V+P
Sbjct: 1013 ---------EGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPL 1062
Query: 656 SILLFGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
+LLF S VQ V +D W+++ + A LR + +++ ++ + P
Sbjct: 1063 QLLLFA-SKKVQSDGQLVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQP 1115
>UNIPROTKB|F1NS70 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR007275 Pfam:PF04146
PROSITE:PS50882 OMA:RAFWESS EMBL:AADN02056192 EMBL:AADN02056193
IPI:IPI00591470 Ensembl:ENSGALT00000000247 Uniprot:F1NS70
Length = 1339
Score = 613 (220.8 bits), Expect = 1.9e-80, Sum P(2) = 1.9e-80
Identities = 183/588 (31%), Positives = 298/588 (50%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAAS-YRF--GGPSSDWL 225
+++ +D DL+ L+ ++ + GAIL+FLPG EI L DR+ RF S +
Sbjct: 510 DDEKVDLDLIMHLLYNICNSSDGGAILIFLPGYDEIISLRDRIIFDDKRFVDNAHSKYQV 569
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
LHS++ ++DQK V PP IRK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 570 FMLHSNMQTLDQKNVLKTPPSGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDALS 629
Query: 286 KLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
++ + WIS +PG+C+ L++R R++ ++ +Q PE++RMPL ELC
Sbjct: 630 CVTMLKTVWISKASAIQRRGRAGRCRPGVCFHLFSRLRFQNMLE-FQTPELRRMPLQELC 688
Query: 346 LQIKLLSLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L KLL+ + FL KA +PP + AI +L ++ A++ E+LT LG+HLA+LPV
Sbjct: 689 LHTKLLAPVNCPVVDFLMKAPDPPPALIVRNAIQMLKKIDAMDVWEDLTELGYHLAELPV 748
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ +GKM+L + CL PIL+I+ L+Y+ PF+ P Q +RA A+L K L+
Sbjct: 749 EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTVASQ--KRA--AMLCRKR--LA- 801
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+ T SDH+VL+ A++ WQK R + FC K FLS + M +I MR Q L
Sbjct: 802 ---AGTFSDHMVLLRAFQAWQKA---RSDGWERVFCEKNFLSQATMEIIIGMRTQLLGQL 855
Query: 524 ADIGLINLPNKNQTGGKKKD---DLDSWFSDESQMF-NMYAN--HSSIVKAILCAGLYPN 577
+G + + + G +D + ++W ++ + MY N H +L
Sbjct: 856 RALGFV----RARGGADIRDVNVNSENWAVVKAALVAGMYPNLVHVDRENLVLTGPKEKK 911
Query: 578 VAATEQGVAGAALSNLRKSSN---SAAKAHPV-W--YDGRREVH----IHPSSINSQLKS 627
V V A SN +A +A P W YD H I S+ + +
Sbjct: 912 VRFHPTSVLSQAQYKKIPPSNGQAAAVQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTV 971
Query: 628 --FEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTAPA 685
F P + ++ F R + + G + + + +D WL +
Sbjct: 972 ALFSGPARLPRNALQEPLSF-RGNRVSNDNDS--DSGMEDERSNVALLKLDEWLHFKLDS 1028
Query: 686 QTAVLFKELRLTLHSILRQMIRNPQNSTIANNEV-VKSMIQLLLEEDK 732
+ A L +L+L HS+L + +R P +E+ ++++I +L E++
Sbjct: 1029 EVAGLLMQLKLKWHSLLLRRMRAPSKPWSQADEITIRAIISVLSTEEQ 1076
Score = 236 (88.1 bits), Expect = 1.9e-80, Sum P(2) = 1.9e-80
Identities = 49/94 (52%), Positives = 62/94 (65%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLLI L+D+L+ Q+ LK+I+ SA +D+NL
Sbjct: 211 MAGDSALSTVTHVIVDEVHERDRFSDFLLIKLRDILQNQT-----NLKLIISSAALDANL 265
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F +YFG CPVI +GR V FLED+ S Y
Sbjct: 266 FIKYFGSCPVIHIQGRPFEVKEMFLEDILRSTGY 299
Score = 58 (25.5 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 38/168 (22%), Positives = 63/168 (37%)
Query: 441 DEKQNVERAKLALLTDKL-EGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFC 499
D ER+ +ALL KL E L DS +LM KW +LL+R ++ +
Sbjct: 1003 DSGMEDERSNVALL--KLDEWLHFKLDSEVAG---LLMQLKLKWHSLLLRRMRAPSKPWS 1057
Query: 500 SKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMY 559
++ + + QF LL G+ P + +W S S
Sbjct: 1058 QADEITIRAIISVLSTEEQFAGLLQPSGVGQRPRP--VSYNELPSAPTWRSSSSSAETEL 1115
Query: 560 ANHSSIVKAILCAGLYPNVAAT----EQGVAGAALSNLRKSSNSAAKA 603
++ SS + +L P E+ V + ++ KS S+ K+
Sbjct: 1116 SDDSSNAEKVLRKSAPPAFHQPRRHKEKNVVASKRTSDEKSDQSSVKS 1163
Score = 43 (20.2 bits), Expect = 4.1e-60, Sum P(2) = 4.1e-60
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 77 TAEGRTHPVTTYFLEDVYES 96
T G+T + + L+D YE+
Sbjct: 128 TGSGKTTQIPQFLLDDCYEN 147
>RGD|1308548 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10116 "Rattus norvegicus" [GO:0001085 "RNA polymerase II
transcription factor binding" evidence=IEA;ISO] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005813 "centrosome"
evidence=IEA;ISO] [GO:0007623 "circadian rhythm" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA;ISO]
[GO:0034605 "cellular response to heat" evidence=IEA;ISO]
[GO:0070934 "CRD-mediated mRNA stabilization" evidence=IEA;ISO]
[GO:0070937 "CRD-mediated mRNA stability complex" evidence=IEA;ISO]
InterPro:IPR001159 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137
PROSITE:PS51194 SMART:SM00358 SMART:SM00490 SMART:SM00847
InterPro:IPR014720 RGD:1308548 GO:GO:0005524 Gene3D:3.30.160.20
GO:GO:0005622 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 OrthoDB:EOG4HHP1J
EMBL:CH473958 IPI:IPI00947663 RefSeq:NP_001100654.1
UniGene:Rn.107359 Ensembl:ENSRNOT00000064860 GeneID:304859
KEGG:rno:304859 UCSC:RGD:1308548 NextBio:653729 Uniprot:D4A9D6
Length = 1174
Score = 522 (188.8 bits), Expect = 2.1e-80, Sum P(3) = 2.1e-80
Identities = 126/368 (34%), Positives = 199/368 (54%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGG 219
+T+ ++ +LNE ++L+E L+ +++ GA+LVFLPG I+ + L + FG
Sbjct: 622 ETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 681
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
+L LHS + +Q+KVF P+ + KVI++TNIAETSITI+DVVYV D + K
Sbjct: 682 HRYQ-ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVK 740
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
+ + +++ W S V+PG C+ L +R R+++L + PEM R
Sbjct: 741 LFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRL-ETHMTPEMFRT 799
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
PL E+ L IKLL LG I FL+KA+EPP +A+ A L E+ A++ ++ELTPLG LA
Sbjct: 800 PLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 859
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLE 459
KLP++ GKMM+ G IF + +ISA + PFI E +L +
Sbjct: 860 KLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS--------EGKRLGYIHRNFA 911
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
G + SDH+ L+ ++ W + G +A +FC + L+ + + M + ++Q
Sbjct: 912 G-------NRFSDHVALLSVFQAWDDARMS-GEEAEIRFCEQKRLNMATLRMTWEAKVQL 963
Query: 520 GTLLADIG 527
+L + G
Sbjct: 964 KEILINSG 971
Score = 222 (83.2 bits), Expect = 2.1e-80, Sum P(3) = 2.1e-80
Identities = 41/91 (45%), Positives = 64/91 (70%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D++ A+ P+++++LMSAT+D+ +F
Sbjct: 502 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVV---LAY--PEVRIVLMSATIDTTMFCE 556
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CP+I GRT PV YFLED + +
Sbjct: 557 YFFNCPIIEVYGRTFPVQEYFLEDCIQMTQF 587
Score = 136 (52.9 bits), Expect = 2.1e-80, Sum P(3) = 2.1e-80
Identities = 38/130 (29%), Positives = 66/130 (50%)
Query: 609 DGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSI 664
+GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LLF S
Sbjct: 1019 EGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SK 1076
Query: 665 NVQHQTGQVT-IDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSM 723
VQ GQ+ ID W+++ + A LR + +++ ++ + P N + V + M
Sbjct: 1077 KVQSD-GQIVFIDDWIRLQISHEAAACITALRAAMEALVVEVSKQP-NIISQLDPVNEHM 1134
Query: 724 IQLLLEEDKP 733
+ + + +P
Sbjct: 1135 LNTIRQISRP 1144
Score = 118 (46.6 bits), Expect = 1.7e-78, Sum P(3) = 1.7e-78
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 561 NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSS 620
N+ +V ++L G+YPNV ++ + + A H + V+ P S
Sbjct: 989 NNLDVVISLLAFGVYPNVCYHKEK------RKILTTEGRNALIH------KSSVNC-PFS 1035
Query: 621 INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLK 680
SQ + PF VF EK+ T + + T+V+P +LLF S VQ V ID W++
Sbjct: 1036 --SQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SKKVQSDGQIVFIDDWIR 1092
Query: 681 VTAPAQTAVLFKELRLTLHSILRQMIRNP 709
+ + A LR + +++ ++ + P
Sbjct: 1093 LQISHEAAACITALRAAMEALVVEVSKQP 1121
Score = 40 (19.1 bits), Expect = 1.7e-22, Sum P(3) = 1.7e-22
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 126 KKNLVLSGWGDDSLLSEEYIN 146
K+ L+ SG+ +D LL++ + N
Sbjct: 964 KEILINSGFPEDCLLTQVFTN 984
>UNIPROTKB|J9PAM3 [details] [associations]
symbol:YTHDC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS50088 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 GO:GO:0005524
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00700000104393 GO:GO:0008026
EMBL:AAEX03007702 Ensembl:ENSCAFT00000046695 Uniprot:J9PAM3
Length = 1000
Score = 599 (215.9 bits), Expect = 2.9e-80, Sum P(2) = 2.9e-80
Identities = 150/402 (37%), Positives = 227/402 (56%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDR-LAASYRFGGPSSDW-LL 226
+++ +D DL+ L+ ++ C GAIL+FLPG EI L DR L RF + + +
Sbjct: 599 DDEKVDLDLIMHLLYNICHGCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQVF 658
Query: 227 ALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKK 286
LHS++ + DQKKV PP +RK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 659 MLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNF 718
Query: 287 LSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCL 346
++ + WIS +PGIC+ L++R R++ ++ +Q PE+ RMPL ELCL
Sbjct: 719 VTMLKMVWISKASAVQRKGRAGRCRPGICFRLFSRLRFQNMLE-FQTPELLRMPLQELCL 777
Query: 347 QIKLLSLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
KLL+ I FL KA EPP + A+ +L + A++ E+LT LG+HLA LPV+
Sbjct: 778 HTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPVE 837
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
+GKM+L + CL PIL+I+ L+Y+ PF+ P Q +RA A+L K
Sbjct: 838 PHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQ--KRA--AMLCRK------R 887
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF-GTLL 523
+ T SDH+ L+ A++ WQK R + FC K FLS + M +I MR Q G L
Sbjct: 888 FTAGTFSDHMALLRAFQAWQKA---RSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLR 944
Query: 524 ADIGLINLPNKNQTGGKKKD---DLDSWFSDESQMF-NMYAN 561
A G + + + GG +D + ++W ++ + MY N
Sbjct: 945 AS-GFV----RARGGGDIRDVNTNSENWAVVKAALVAGMYPN 981
Score = 240 (89.5 bits), Expect = 2.9e-80, Sum P(2) = 2.9e-80
Identities = 52/94 (55%), Positives = 61/94 (64%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLL L+DLL+K H P LK+IL SA +D NL
Sbjct: 300 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQK---H--PTLKLILSSAALDVNL 354
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F RYFG CPVI +GR V FLED+ + Y
Sbjct: 355 FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 388
Score = 74 (31.1 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 26/86 (30%), Positives = 40/86 (46%)
Query: 498 FCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFN 557
FC K FLS + M +I MR Q L G + + + GG +D N
Sbjct: 918 FCEKNFLSQATMEIIIGMRTQLLGQLRASGFV----RARGGGDIRD------------VN 961
Query: 558 MYANHSSIVKAILCAGLYPNVAATEQ 583
+ + ++VKA L AG+YPN+ ++
Sbjct: 962 TNSENWAVVKAALVAGMYPNLVHVDR 987
Score = 42 (19.8 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 200 GVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
G EI LL+ +AS FG L+ + S S + +++
Sbjct: 550 GQTEIVDLLESYSASLEFGNLDESSLVHTNGSDLSAEDREL 590
>MGI|MGI:108177 [details] [associations]
symbol:Dhx9 "DEAH (Asp-Glu-Ala-His) box polypeptide 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001085 "RNA polymerase II transcription factor
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005813 "centrosome" evidence=ISO]
[GO:0007623 "circadian rhythm" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0034605 "cellular response to heat"
evidence=IDA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=ISO] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISO] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 MGI:MGI:108177 GO:GO:0005524
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 GO:GO:0007623
Gene3D:3.30.160.20 GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247063 CTD:1660
HOVERGEN:HBG039429 KO:K13184 OrthoDB:EOG4HHP1J GO:GO:0070937
EMBL:U91922 EMBL:AF023530 EMBL:AY512925 EMBL:BC089159 EMBL:AK013423
EMBL:U92080 IPI:IPI00339468 IPI:IPI00607914 IPI:IPI00875791
RefSeq:NP_031868.2 UniGene:Mm.20000 PDB:1UIL PDB:1WHQ PDB:2RS6
PDB:2RS7 PDBsum:1UIL PDBsum:1WHQ PDBsum:2RS6 PDBsum:2RS7
ProteinModelPortal:O70133 SMR:O70133 IntAct:O70133 STRING:O70133
PhosphoSite:O70133 PaxDb:O70133 PRIDE:O70133 GeneID:13211
KEGG:mmu:13211 UCSC:uc007czy.1 InParanoid:O70133 ChiTaRS:DHX9
EvolutionaryTrace:O70133 NextBio:283382 CleanEx:MM_DHX9
Genevestigator:O70133 GermOnline:ENSMUSG00000042699 Uniprot:O70133
Length = 1380
Score = 523 (189.2 bits), Expect = 7.1e-80, Sum P(3) = 7.1e-80
Identities = 127/368 (34%), Positives = 199/368 (54%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGG 219
+T+ ++ +LNE ++L+E L+ +++ GA+LVFLPG I+ + L + FG
Sbjct: 621 ETKLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLENNSHFGS 680
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
+L LHS + +Q+KVF P+ + KVI++TNIAETSITI+DVVYV D + K
Sbjct: 681 HRYQ-ILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVK 739
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
+ + +++ W S V+PG C+ L +R R+++L + PEM R
Sbjct: 740 LFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRL-ETHMTPEMFRT 798
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
PL E+ L IKLL LG I FL+KA+EPP +AI A L E+ A++ ++ELTPLG LA
Sbjct: 799 PLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAIIEAEHTLRELDALDANDELTPLGRILA 858
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLE 459
KLP++ GKMM+ G IF + +ISA + PFI E +L +
Sbjct: 859 KLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS--------EGKRLGYIHRNFA 910
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
G + SDH+ L+ ++ W + G +A +FC + L+ + + M + ++Q
Sbjct: 911 G-------NRFSDHVALLSVFQAWDDARMS-GEEAEIRFCEQKRLNMATLRMTWEAKVQL 962
Query: 520 GTLLADIG 527
+L + G
Sbjct: 963 KEILINSG 970
Score = 222 (83.2 bits), Expect = 7.1e-80, Sum P(3) = 7.1e-80
Identities = 41/91 (45%), Positives = 64/91 (70%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D++ A+ P+++++LMSAT+D+ +F
Sbjct: 501 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVV---LAY--PEVRIVLMSATIDTTMFCE 555
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CP+I GRT PV YFLED + +
Sbjct: 556 YFFNCPIIEVYGRTFPVQEYFLEDCIQMTQF 586
Score = 126 (49.4 bits), Expect = 7.1e-80, Sum P(3) = 7.1e-80
Identities = 37/130 (28%), Positives = 66/130 (50%)
Query: 609 DGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSI 664
+GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LLF S
Sbjct: 1018 EGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SK 1075
Query: 665 NVQHQTGQVT-IDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSM 723
VQ GQ+ ID W+++ + A +R + +++ ++ + P N + V + M
Sbjct: 1076 KVQSD-GQIVFIDDWIRLQISHEAAACIT-IRAAMEALVVEVSKQP-NIISQLDPVNEHM 1132
Query: 724 IQLLLEEDKP 733
+ + + +P
Sbjct: 1133 LNTIRQISRP 1142
Score = 100 (40.3 bits), Expect = 3.8e-77, Sum P(3) = 3.8e-77
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 561 NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSS 620
N+ +V ++L G+YPNV ++ + + A H + V+ P S
Sbjct: 988 NNLDVVISLLAFGVYPNVCYHKEK------RKILTTEGRNALIH------KSSVNC-PFS 1034
Query: 621 INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLK 680
SQ + PF VF EK+ T + + T+V+P +LLF S VQ V ID W++
Sbjct: 1035 --SQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SKKVQSDGQIVFIDDWIR 1091
Query: 681 VTAPAQTA 688
+ + A
Sbjct: 1092 LQISHEAA 1099
Score = 40 (19.1 bits), Expect = 3.4e-21, Sum P(3) = 3.4e-21
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 126 KKNLVLSGWGDDSLLSEEYIN 146
K+ L+ SG+ +D LL++ + N
Sbjct: 963 KEILINSGFPEDCLLTQVFTN 983
>UNIPROTKB|Q5R874 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9601
"Pongo abelii" [GO:0030529 "ribonucleoprotein complex"
evidence=ISS] [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=ISS] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0030529 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ GO:GO:0070934
EMBL:CR859880 RefSeq:XP_002809755.1 UniGene:Pab.8432
ProteinModelPortal:Q5R874 SMR:Q5R874 PRIDE:Q5R874
Ensembl:ENSPPYT00000000510 GeneID:100449914 KEGG:pon:100449914
InParanoid:Q5R874 Uniprot:Q5R874
Length = 1269
Score = 519 (187.8 bits), Expect = 1.4e-79, Sum P(3) = 1.4e-79
Identities = 129/368 (35%), Positives = 198/368 (53%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGG 219
+TR ++ +LNE ++L+E L+ +++ GA+LVFLPG I+ + L + FG
Sbjct: 619 ETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
+L LHS + +Q+KVF P + KVI++TNIAETSITI+DVVYV D + K
Sbjct: 679 HRYQ-ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVK 737
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
+ + +++ W S V+PG C+ L +R R+E+L + PEM R
Sbjct: 738 LFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERL-ETHMTPEMFRT 796
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
PL E+ L IKLL LG I FL+KA+EPP +A+ A L E+ A++ ++ELTPLG LA
Sbjct: 797 PLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 856
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLE 459
KLP++ GKMM+ G IF I +I+A + PFI N E +L +
Sbjct: 857 KLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-------N-EGKRLGYIHRNFA 908
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
G + SDH+ L+ ++ W + G +A +FC L+ + + M + ++Q
Sbjct: 909 G-------NRFSDHVALLSVFQAWDDARMG-GEEAEIRFCEHKRLNMATLRMTWEAKVQL 960
Query: 520 GTLLADIG 527
+L + G
Sbjct: 961 KEILINSG 968
Score = 231 (86.4 bits), Expect = 1.4e-79, Sum P(3) = 1.4e-79
Identities = 41/91 (45%), Positives = 68/91 (74%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ A+ P+++++LMSAT+D+++F
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQ---AY--PEVRIVLMSATIDTSMFCE 553
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CP+I GRT+PV YFLED + ++
Sbjct: 554 YFFNCPIIEVYGRTYPVQEYFLEDCIQMTHF 584
Score = 138 (53.6 bits), Expect = 1.4e-79, Sum P(3) = 1.4e-79
Identities = 37/130 (28%), Positives = 66/130 (50%)
Query: 609 DGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSI 664
+GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LLF S
Sbjct: 1016 EGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SK 1073
Query: 665 NVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKS-M 723
VQ V +D W+K+ + A LR + +++ ++ + P + I+ + V M
Sbjct: 1074 KVQSDGQIVLVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQP--AIISQLDPVNERM 1131
Query: 724 IQLLLEEDKP 733
+ ++ + +P
Sbjct: 1132 LNMIRQISRP 1141
Score = 121 (47.7 bits), Expect = 8.7e-78, Sum P(3) = 8.7e-78
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 561 NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSS 620
N+ +V ++L G+YPNV ++ + + A H + V+ P S
Sbjct: 986 NNLDVVISLLAFGVYPNVCYHKEK------RKILTTEGRNALIH------KSSVNC-PFS 1032
Query: 621 INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLK 680
SQ + PF VF EK+ T + + T+V+P +LLF S VQ V +D W+K
Sbjct: 1033 --SQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SKKVQSDGQIVLVDDWIK 1089
Query: 681 VTAPAQTAVLFKELRLTLHSILRQMIRNP 709
+ + A LR + +++ ++ + P
Sbjct: 1090 LQISHEAAACITGLRAAMEALVVEVTKQP 1118
Score = 40 (19.1 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 126 KKNLVLSGWGDDSLLSEEYIN 146
K+ L+ SG+ +D LL++ + N
Sbjct: 961 KEILINSGFPEDCLLTQVFTN 981
>UNIPROTKB|Q08211 [details] [associations]
symbol:DHX9 "ATP-dependent RNA helicase A" species:9606
"Homo sapiens" [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0070937 "CRD-mediated mRNA stability
complex" evidence=IDA] [GO:0070934 "CRD-mediated mRNA
stabilization" evidence=IMP] [GO:0030529 "ribonucleoprotein
complex" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0008380 "RNA splicing"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0001085 "RNA polymerase II transcription factor binding"
evidence=IPI] Reactome:REACT_71 InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0034605
GO:GO:0005730 GO:GO:0003677 Reactome:REACT_1675 Gene3D:3.30.160.20
EMBL:CH471067 GO:GO:0030529 GO:GO:0003725 GO:GO:0004003
GO:GO:0000398 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000247063 CTD:1660 HOVERGEN:HBG039429 KO:K13184
OrthoDB:EOG4HHP1J GO:GO:0070937 OMA:DDWIRLQ EMBL:L13848 EMBL:U03643
EMBL:Y10658 EMBL:AB451248 EMBL:AB451372 EMBL:AL355999 EMBL:AL662837
EMBL:BC025245 EMBL:BC058896 EMBL:BC107881 EMBL:BC137136
IPI:IPI00844578 RefSeq:NP_001348.2 UniGene:Hs.191518 PDB:3LLM
PDBsum:3LLM ProteinModelPortal:Q08211 SMR:Q08211 DIP:DIP-31504N
IntAct:Q08211 MINT:MINT-5000572 STRING:Q08211 PhosphoSite:Q08211
DMDM:116241330 SWISS-2DPAGE:Q08211 PaxDb:Q08211 PRIDE:Q08211
Ensembl:ENST00000367549 GeneID:1660 KEGG:hsa:1660 UCSC:uc001gpr.3
GeneCards:GC01P182808 H-InvDB:HIX0001404 H-InvDB:HIX0149309
HGNC:HGNC:2750 HPA:CAB011819 HPA:HPA028050 MIM:603115
neXtProt:NX_Q08211 PharmGKB:PA27232 InParanoid:Q08211
GenomeRNAi:1660 NextBio:6832 PMAP-CutDB:Q08211 ArrayExpress:Q08211
Bgee:Q08211 CleanEx:HS_DHX9 Genevestigator:Q08211
GermOnline:ENSG00000135829 GO:GO:0070934 Uniprot:Q08211
Length = 1270
Score = 519 (187.8 bits), Expect = 1.4e-79, Sum P(3) = 1.4e-79
Identities = 129/368 (35%), Positives = 198/368 (53%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGG 219
+TR ++ +LNE ++L+E L+ +++ GA+LVFLPG I+ + L + FG
Sbjct: 619 ETRLSMSQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGS 678
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
+L LHS + +Q+KVF P + KVI++TNIAETSITI+DVVYV D + K
Sbjct: 679 HRYQ-ILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVK 737
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
+ + +++ W S V+PG C+ L +R R+E+L + PEM R
Sbjct: 738 LFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERL-ETHMTPEMFRT 796
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
PL E+ L IKLL LG I FL+KA+EPP +A+ A L E+ A++ ++ELTPLG LA
Sbjct: 797 PLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 856
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLE 459
KLP++ GKMM+ G IF I +I+A + PFI N E +L +
Sbjct: 857 KLPIEPRFGKMMIMGCIFYVGDAICTIAAATCFPEPFI-------N-EGKRLGYIHRNFA 908
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
G + SDH+ L+ ++ W + G +A +FC L+ + + M + ++Q
Sbjct: 909 G-------NRFSDHVALLSVFQAWDDARMG-GEEAEIRFCEHKRLNMATLRMTWEAKVQL 960
Query: 520 GTLLADIG 527
+L + G
Sbjct: 961 KEILINSG 968
Score = 231 (86.4 bits), Expect = 1.4e-79, Sum P(3) = 1.4e-79
Identities = 41/91 (45%), Positives = 68/91 (74%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ A+ P+++++LMSAT+D+++F
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQ---AY--PEVRIVLMSATIDTSMFCE 553
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CP+I GRT+PV YFLED + ++
Sbjct: 554 YFFNCPIIEVYGRTYPVQEYFLEDCIQMTHF 584
Score = 138 (53.6 bits), Expect = 1.4e-79, Sum P(3) = 1.4e-79
Identities = 37/130 (28%), Positives = 66/130 (50%)
Query: 609 DGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSI 664
+GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LLF S
Sbjct: 1016 EGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SK 1073
Query: 665 NVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKS-M 723
VQ V +D W+K+ + A LR + +++ ++ + P + I+ + V M
Sbjct: 1074 KVQSDGQIVLVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQP--AIISQLDPVNERM 1131
Query: 724 IQLLLEEDKP 733
+ ++ + +P
Sbjct: 1132 LNMIRQISRP 1141
Score = 121 (47.7 bits), Expect = 8.8e-78, Sum P(3) = 8.8e-78
Identities = 39/149 (26%), Positives = 68/149 (45%)
Query: 561 NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSS 620
N+ +V ++L G+YPNV ++ + + A H + V+ P S
Sbjct: 986 NNLDVVISLLAFGVYPNVCYHKEK------RKILTTEGRNALIH------KSSVNC-PFS 1032
Query: 621 INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLK 680
SQ + PF VF EK+ T + + T+V+P +LLF S VQ V +D W+K
Sbjct: 1033 --SQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SKKVQSDGQIVLVDDWIK 1089
Query: 681 VTAPAQTAVLFKELRLTLHSILRQMIRNP 709
+ + A LR + +++ ++ + P
Sbjct: 1090 LQISHEAAACITGLRAAMEALVVEVTKQP 1118
Score = 40 (19.1 bits), Expect = 1.5e-23, Sum P(3) = 1.5e-23
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 126 KKNLVLSGWGDDSLLSEEYIN 146
K+ L+ SG+ +D LL++ + N
Sbjct: 961 KEILINSGFPEDCLLTQVFTN 981
>UNIPROTKB|Q68FK8 [details] [associations]
symbol:dhx9 "ATP-dependent RNA helicase A-like protein"
species:8355 "Xenopus laevis" [GO:0070937 "CRD-mediated mRNA
stability complex" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:3.30.160.20
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:1660
HOVERGEN:HBG039429 KO:K13184 GO:GO:0070937 EMBL:BC079701
RefSeq:NP_001087383.1 UniGene:Xl.55621 ProteinModelPortal:Q68FK8
SMR:Q68FK8 PRIDE:Q68FK8 GeneID:447207 KEGG:xla:447207
Xenbase:XB-GENE-967780 Uniprot:Q68FK8
Length = 1262
Score = 519 (187.8 bits), Expect = 3.6e-79, Sum P(3) = 3.6e-79
Identities = 140/406 (34%), Positives = 214/406 (52%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGG 219
+TR+++ +L+E +L+E L+ +++ GA+LVFLPG I+ + L + FG
Sbjct: 621 ETRRSMSQLSEKETPLELIEALLKYIETLNVPGAVLVFLPGWNLIYAMQKHLEMNPHFGS 680
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
S +L LHS + +Q+KVF P+ I KVI++TNIAETSITI+DVVYV D + K
Sbjct: 681 HSY-CILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVK 739
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
+ S +++ W S V+PG C+ L ++ R++KL + PE+ R
Sbjct: 740 LFTSHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSKARFDKL-ETHLTPEIFRT 798
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
PL E+ L IKLL LG I FLSKA+EPP +A+ A L E+ A++ ++ELTPLG LA
Sbjct: 799 PLHEVALSIKLLRLGGIGHFLSKAIEPPPLDAVIEAEHTLRELDALDSNDELTPLGRILA 858
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLE 459
KLP++ +GKMM+ G IF + +ISA + PFI E +L +
Sbjct: 859 KLPIEPRLGKMMIIGCIFYVGDALCTISAATCFPEPFIS--------EGRRLGYVHRNFA 910
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
G + SDH+ L+ ++ W + G A +FC L+ + + M + ++Q
Sbjct: 911 G-------NRFSDHVALLSVFQAWDDARMG-GEDAETRFCEHKRLNMATLRMTWEAKVQL 962
Query: 520 GTLLADIGLIN--LPNK--NQTGGKKKDDLDSWFSDESQMFNMYAN 561
+L + G L N+ N TG ++LD S F +Y N
Sbjct: 963 KDILVNAGFPEECLMNQVFNNTG--PDNNLDVVIS--LLAFGVYPN 1004
Score = 226 (84.6 bits), Expect = 3.6e-79, Sum P(3) = 3.6e-79
Identities = 41/91 (45%), Positives = 64/91 (70%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ P+++VILMSAT+D+++F
Sbjct: 501 ESGIRGISHVIVDEIHERDINTDFLLVVLRDVIQA-----FPEIRVILMSATIDTSMFCE 555
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CP+I GRT PV Y+LED + +
Sbjct: 556 YFFNCPIIEVFGRTFPVQEYYLEDCIQMTQF 586
Score = 139 (54.0 bits), Expect = 3.6e-79, Sum P(3) = 3.6e-79
Identities = 53/198 (26%), Positives = 97/198 (48%)
Query: 542 KDDL-DSWFSDE---SQMFNMYA--NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRK 595
KD L ++ F +E +Q+FN N+ +V ++L G+YPNV ++ RK
Sbjct: 963 KDILVNAGFPEECLMNQVFNNTGPDNNLDVVISLLAFGVYPNVCYHKEK---------RK 1013
Query: 596 SSNSAAKAHPVWYDGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTI 651
+ +GR + IH SS+N +Q + PF VF EK+ T + + T+
Sbjct: 1014 ILTT---------EGRNAL-IHKSSVNCPFSNQDLKYPSPFFVFSEKIRTRAISAKGMTM 1063
Query: 652 VSPFSILLFGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQN 711
VSP +LLF S V + +D W+K++ + + LR L +++ ++ + P+
Sbjct: 1064 VSPLQLLLFA-SKKVMSDGEFIHLDDWIKLSMAHEESACITALRAALEALVVEVTKEPEI 1122
Query: 712 STIAN--NEVVKSMIQLL 727
+ + NE + +MI+++
Sbjct: 1123 LSQLDPVNEKMLNMIRVI 1140
>UNIPROTKB|E2RNT3 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070937 "CRD-mediated mRNA stability complex"
evidence=IEA] [GO:0070934 "CRD-mediated mRNA stabilization"
evidence=IEA] [GO:0034605 "cellular response to heat" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005813 "centrosome"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001085
"RNA polymerase II transcription factor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003725 "double-stranded RNA
binding" evidence=IEA] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005813
GO:GO:0034605 GO:GO:0005730 Gene3D:3.30.160.20 GO:GO:0030529
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074257 CTD:1660 KO:K13184 GO:GO:0070937
OMA:DDWIRLQ GO:GO:0070934 EMBL:AAEX03005146 EMBL:AAEX03005147
RefSeq:XP_537154.2 Ensembl:ENSCAFT00000020976 GeneID:480032
KEGG:cfa:480032 NextBio:20855120 Uniprot:E2RNT3
Length = 1276
Score = 517 (187.1 bits), Expect = 6.4e-79, Sum P(3) = 6.4e-79
Identities = 127/368 (34%), Positives = 197/368 (53%)
Query: 160 QTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGG 219
+T+ ++ +LNE ++L+E L+ +++ GA+LVFLPG I+ + L + FG
Sbjct: 620 ETKMSMAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPDFGS 679
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
+L LHS + +Q+KVF P + KVI++TNIAETSITI+DVVYV D + K
Sbjct: 680 HRYQ-ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVK 738
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
+ + +++ W S V+PG C+ L +R R+E+L + PEM R
Sbjct: 739 LFTAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFERL-ETHMTPEMFRT 797
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
PL E+ L IKLL LG I FL+KA+EPP +A+ A L E+ A++ ++ELTPLG LA
Sbjct: 798 PLHEIALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILA 857
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLE 459
KLP++ GKMM+ G IF + +ISA + PFI E +L +
Sbjct: 858 KLPIEPRFGKMMIMGCIFYVGDAVCTISAATCFPEPFIS--------EGKRLGYIHRNFA 909
Query: 460 GLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQF 519
G + SDH+ L+ ++ W + G +A +FC L+ + + M + ++Q
Sbjct: 910 G-------NRFSDHVALLSVFQAWDDARMG-GEEAEIRFCEHKRLNMATLRMTWEAKVQL 961
Query: 520 GTLLADIG 527
+L + G
Sbjct: 962 KEILINSG 969
Score = 231 (86.4 bits), Expect = 6.4e-79, Sum P(3) = 6.4e-79
Identities = 41/91 (45%), Positives = 68/91 (74%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ A+ P+++++LMSAT+D+++F
Sbjct: 500 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQ---AY--PEVRIVLMSATIDTSMFCE 554
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CP+I GRT+PV YFLED + ++
Sbjct: 555 YFFNCPIIEVYGRTYPVQEYFLEDCIQMTHF 585
Score = 139 (54.0 bits), Expect = 6.4e-79, Sum P(3) = 6.4e-79
Identities = 36/129 (27%), Positives = 65/129 (50%)
Query: 609 DGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSI 664
+GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LLF S
Sbjct: 1017 EGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SK 1074
Query: 665 NVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVKSMI 724
VQ V +D W+++ + A LR + +++ ++ + P N + V + M+
Sbjct: 1075 KVQSDGQIVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQP-NIISQLDPVNEHML 1133
Query: 725 QLLLEEDKP 733
++ + +P
Sbjct: 1134 NMIRQISRP 1142
Score = 119 (46.9 bits), Expect = 8.0e-77, Sum P(3) = 8.0e-77
Identities = 38/149 (25%), Positives = 68/149 (45%)
Query: 561 NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSS 620
N+ +V ++L G+YPNV ++ + + A H + V+ P S
Sbjct: 987 NNLDVVISLLAFGVYPNVCYHKEK------RKILTTEGRNALIH------KSSVNC-PFS 1033
Query: 621 INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLK 680
SQ + PF VF EK+ T + + T+V+P +LLF S VQ V +D W++
Sbjct: 1034 --SQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SKKVQSDGQIVLVDDWIR 1090
Query: 681 VTAPAQTAVLFKELRLTLHSILRQMIRNP 709
+ + A LR + +++ ++ + P
Sbjct: 1091 LQISHEAAACITALRAAMEALVVEVTKQP 1119
Score = 40 (19.1 bits), Expect = 1.2e-23, Sum P(3) = 1.2e-23
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 126 KKNLVLSGWGDDSLLSEEYIN 146
K+ L+ SG+ +D LL++ + N
Sbjct: 962 KEILINSGFPEDCLLTQVFTN 982
>TAIR|locus:2009200 [details] [associations]
symbol:NIH "nuclear DEIH-boxhelicase" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=ISS]
InterPro:IPR002110 InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00248 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 Gene3D:1.25.40.20
InterPro:IPR020683 SUPFAM:SSF48403 PROSITE:PS50297
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0008026 IPI:IPI00521146 RefSeq:NP_172152.1 UniGene:At.20810
PRIDE:F4IDQ6 EnsemblPlants:AT1G06670.1 GeneID:837177
KEGG:ath:AT1G06670 OMA:GNMEENT Uniprot:F4IDQ6
Length = 1576
Score = 572 (206.4 bits), Expect = 3.1e-77, Sum P(3) = 3.1e-77
Identities = 129/349 (36%), Positives = 191/349 (54%)
Query: 168 LNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA 227
+ + +D L+ L+ + +GAILVFLPG EI ++L F + +L
Sbjct: 552 IKPEEVDVGLIVKLMKKICSDSKDGAILVFLPGWEEISKTKEKLLDDRFFAHSAKFIILC 611
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
LHS V + +QKKVF RPP RK+++ATNIAE+++TIDDVVYV D GR KE Y+ +
Sbjct: 612 LHSRVPAEEQKKVFNRPPRGCRKIVLATNIAESAVTIDDVVYVIDSGRMKEKSYDPYNDV 671
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S++ W+S + GICY LY++ R L Y+VPE+ RMP+ ELCLQ
Sbjct: 672 STLQSSWVSKANAKQRAGRAGRCQAGICYHLYSKLRAASLPE-YRVPEVMRMPVDELCLQ 730
Query: 348 IKLLSLG-RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
+K+L + FL K ++PP ++I A+ +L ++GA+ +EELT LG +LPV
Sbjct: 731 VKMLDPNCNVNDFLQKLMDPPVAQSIENALIILKDIGALTPEEELTELGQKFGQLPVHPR 790
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
I KM+ F + CL P L ++ K PF P +R K A +L L +
Sbjct: 791 ISKMIYFAILVNCLDPALILACAADEKDPFTMPLSPG---DRKKAAAAKHELASLYGDH- 846
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDM 515
SDHL + A++ W+ + + A++FCSKYF+S VM + D+
Sbjct: 847 ----SDHLATVAAFQCWKNA---KASGQAKEFCSKYFISQVVMKRLDDL 888
Score = 226 (84.6 bits), Expect = 3.1e-77, Sum P(3) = 3.1e-77
Identities = 42/90 (46%), Positives = 61/90 (67%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ ++ +TH+IVDE+HER DF+L++L+DLL P L++ILMSAT+D+ FS
Sbjct: 331 NSSVPDITHIIVDEIHERDSYSDFMLMILRDLLPSN-----PHLRLILMSATLDAERFSE 385
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESIN 98
YFG CPV+ G T+PV T+FL+D +N
Sbjct: 386 YFGGCPVVRVPGFTYPVRTFFLDDALSVLN 415
Score = 50 (22.7 bits), Expect = 3.1e-77, Sum P(3) = 3.1e-77
Identities = 29/113 (25%), Positives = 47/113 (41%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHI 616
++ A+ I++A++ GLYP + LS R S A G + V +
Sbjct: 910 SLNAHDPGILRAVIAVGLYPMLGRM------CPLSKNRTRSVIETIA------GAK-VRV 956
Query: 617 HPSSINSQLKS--FEHPFLVFLEKVETN-KVFLRDTTIVSPFSILLFGGSINV 666
S N + S F+ +VF E + V +R T++ +LLF I V
Sbjct: 957 PSLSNNVDMSSTKFDEALIVFDEITRGDWGVVIRSCTVLPTIPVLLFSREIAV 1009
Score = 45 (20.9 bits), Expect = 2.8e-58, Sum P(3) = 2.8e-58
Identities = 21/89 (23%), Positives = 38/89 (42%)
Query: 38 KDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYESI 97
+++ E +S + ++SA V+SN G+ T G+T V Y L+ ++ S
Sbjct: 208 REIFEARSKLPIASFRDAIISA-VESNQVVLIAGE----TGCGKTTQVPQYLLDHMWHSK 262
Query: 98 NYRLALDSAAAIRYEASSKSGPVNNRRGK 126
+ R A S S ++ RG+
Sbjct: 263 KEACKIICTQPRRISAISVSDRISWERGE 291
Score = 42 (19.8 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 247 KIRKVIIATNIAETSITIDDVVYVFD 272
K+R ++ N+ +S D+ + VFD
Sbjct: 953 KVRVPSLSNNVDMSSTKFDEALIVFD 978
Score = 39 (18.8 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 8/17 (47%), Positives = 13/17 (76%)
Query: 201 VAEIHILLDRLAASYRF 217
+A+++IL +RL AS F
Sbjct: 1073 IAQMYILRERLMASILF 1089
>UNIPROTKB|I3LCY3 [details] [associations]
symbol:DHX36 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009615
GO:GO:0003725 GO:GO:0004386 GO:GO:0043330
GeneTree:ENSGT00550000074257 EMBL:FP312685
Ensembl:ENSSSCT00000023601 Uniprot:I3LCY3
Length = 987
Score = 625 (225.1 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 130/305 (42%), Positives = 192/305 (62%)
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
HS++ ++ +VF R P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q +S
Sbjct: 496 HSNLCYLNILQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNIS 555
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
+M +W+S V+PG CY LY R L+ YQ+PE+ R PL ELCLQI
Sbjct: 556 TMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEELCLQI 614
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K+L LG I FLS+ ++PP EA++ +I L E+ A++ EELTPLG HLA+LPV+ IG
Sbjct: 615 KILRLGGIAYFLSRLMDPPSNEAVSLSIKHLMELNALDKQEELTPLGVHLARLPVEPHIG 674
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSS 468
KM+LFG +F CL P+L+I+A LS+K PF+ P +++ + + L D
Sbjct: 675 KMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADARRKELAKD------------ 722
Query: 469 TQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGL 528
T+SDHL ++ A++ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L G
Sbjct: 723 TKSDHLTVVNAFEGWEEAR-RRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGF 781
Query: 529 INLPN 533
+ N
Sbjct: 782 VRSRN 786
Score = 178 (67.7 bits), Expect = 1.0e-76, Sum P(2) = 1.0e-76
Identities = 54/186 (29%), Positives = 97/186 (52%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAA---LSNLRKSSNSAAKAHPVWYDGRRE 613
N+ +++ I+KA++CAGLYP VA + L ++ KS++ + Y
Sbjct: 793 NINSDNEKIIKAVICAGLYPKVAKIRLNLGKKRKIFLIHVPKSTDDLIETKQNKYK---- 848
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQV 673
+++ +I +L +E + F + ++L D T VSP+ +L FGG I++Q + Q
Sbjct: 849 -YLYSFAIMGRL--YEKNVVFFGLMLCFGLIYLYDCTEVSPYCLLFFGGDISIQKDSDQE 905
Query: 674 TI--DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTIANN-EVVKSMIQL 726
TI D W+ +PA+ A L KELR L +L++ I +P T + + V+ ++I L
Sbjct: 906 TIAVDEWIIFQSPARIAHLVKELRKELDILLQEKIESPHPVDWKDTKSRDCAVLSAIIDL 965
Query: 727 LLEEDK 732
+ ++K
Sbjct: 966 IKTQEK 971
>UNIPROTKB|I3LHZ6 [details] [associations]
symbol:DHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00358 SMART:SM00490 SMART:SM00847 InterPro:IPR014720
GO:GO:0005524 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00550000074257 OMA:DDWIRLQ
Ensembl:ENSSSCT00000025297 Uniprot:I3LHZ6
Length = 1274
Score = 507 (183.5 bits), Expect = 4.6e-76, Sum P(3) = 4.6e-76
Identities = 126/363 (34%), Positives = 193/363 (53%)
Query: 165 LKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW 224
+ +LNE ++L+E L+ +++ GA+LVFLPG I+ + L + FG
Sbjct: 616 MAQLNEKETPFELIEALLKYIETLNVPGAVLVFLPGWNLIYTMQKHLEMNPHFGNHRYQ- 674
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
+L LHS + +Q+KVF P + KVI++TNIAETSITI+DVVYV D + K + +
Sbjct: 675 ILPLHSQIPREEQRKVFDPVPAGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAH 734
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+++ W S V+PG C+ L +R R+++L + PEM R PL E+
Sbjct: 735 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRL-ETHMTPEMFRTPLHEI 793
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
L IKLL LG I FL+KA+EPP +A+ A L E+ A++ ++ELTPLG LAKLP++
Sbjct: 794 ALSIKLLRLGGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIE 853
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
GKMM+ G IF I +ISA + PFI E +L + G
Sbjct: 854 PRFGKMMIMGCIFYVGDAICTISAATCFPEPFIS--------EGKRLGYIHRNFAG---- 901
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLA 524
+ SDH+ L+ ++ W + G +A +FC L+ + + M + ++Q +L
Sbjct: 902 ---NRFSDHVALLSVFQAWDDARMG-GEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILI 957
Query: 525 DIG 527
+ G
Sbjct: 958 NSG 960
Score = 231 (86.4 bits), Expect = 4.6e-76, Sum P(3) = 4.6e-76
Identities = 41/91 (45%), Positives = 68/91 (74%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ A+ P+++++LMSAT+D+++F
Sbjct: 495 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQ---AY--PEVRIVLMSATIDTSMFCE 549
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
YF +CP+I GRT+PV YFLED + ++
Sbjct: 550 YFFNCPIIEVYGRTYPVQEYFLEDCIQMTHF 580
Score = 133 (51.9 bits), Expect = 4.6e-76, Sum P(3) = 4.6e-76
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 609 DGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSI 664
+GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LLF S
Sbjct: 1008 EGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SK 1065
Query: 665 NVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
VQ V +D W+++ + A LR + +++ ++ + P
Sbjct: 1066 KVQSDGQIVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQP 1110
Score = 40 (19.1 bits), Expect = 4.9e-23, Sum P(3) = 4.9e-23
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 126 KKNLVLSGWGDDSLLSEEYIN 146
K+ L+ SG+ +D LL++ + N
Sbjct: 953 KEILINSGFPEDCLLTQVFTN 973
>UNIPROTKB|F1P1F4 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0042645
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00593383 OMA:LHKEERY EMBL:AADN02000053
Ensembl:ENSGALT00000008045 Uniprot:F1P1F4
Length = 1231
Score = 541 (195.5 bits), Expect = 4.9e-72, Sum P(2) = 4.9e-72
Identities = 130/367 (35%), Positives = 200/367 (54%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E V+D DL+ DLV +D G IL FLPG EI + RL G +S +L L
Sbjct: 689 DECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM--LGSQNSRYLVLP 746
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQ+ +F RPP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 747 VHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKV 806
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R +K M YQVPE+ R PL L +Q
Sbjct: 807 SCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDK-MPTYQVPEILRTPLENLVVQ 865
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKAL+ P +A+ A+ +L E+G ++ E LT LG LA++ D
Sbjct: 866 AKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPR 925
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ I+ CL P+L I + L+ + PF + V++AK L S +
Sbjct: 926 LAKAIVLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVL----------SRE 974
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L +R ++A + Y+L + I + QF L +
Sbjct: 975 SG--SDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEA 1032
Query: 527 GLINLPN 533
L++ P+
Sbjct: 1033 FLVSSPS 1039
Score = 228 (85.3 bits), Expect = 4.9e-72, Sum P(2) = 4.9e-72
Identities = 46/88 (52%), Positives = 64/88 (72%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQG+ +L GV+HV+VDEVHER + DFLLI+LK + +K + P L+++LMSAT D+
Sbjct: 588 LQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGI-QKLN----PDLRLVLMSATGDNQR 642
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FS YFGDCPV+ G +PV Y+LE++
Sbjct: 643 FSHYFGDCPVVKVPGFMYPVKEYYLEEI 670
Score = 162 (62.1 bits), Expect = 1.6e-26, Sum P(2) = 1.6e-26
Identities = 60/239 (25%), Positives = 108/239 (45%)
Query: 471 SDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLIN 530
SDHL + A W+++L +R ++A + Y+L + I + QF L + L++
Sbjct: 977 SDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVS 1036
Query: 531 LPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAAL 590
P+ D S + N Y+ +VK +L AGLYPN+ QG
Sbjct: 1037 SPS------------DCTMP--SSVCNQYSEEEELVKGVLMAGLYPNLIQVRQG------ 1076
Query: 591 SNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETNK-VFLRD 648
+ + K + Y + V +H S+IN + +L + V++N VF+RD
Sbjct: 1077 ---KVTRQGKFKPNSYAYRTKAGTVLLHKSTINREASKLYSRWLTYFMAVKSNGGVFVRD 1133
Query: 649 TTIVSPFSILLFGGS-INVQHQTGQVTI---DGWLKVT-APAQTAVLFKELRLTLHSIL 702
++ V P ++LL + I+V+ + T+ D L V + T L ++ R++L ++
Sbjct: 1134 SSQVHPLAVLLMTDTDIHVRDDGWRATVSLTDSDLLVLEGDSYTIRLLRDFRVSLSKMV 1192
>UNIPROTKB|Q5ZI74 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9031 "Gallus gallus" [GO:0003725 "double-stranded RNA
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0042645
"mitochondrial nucleoid" evidence=ISS] InterPro:IPR001159
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00035 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0042645 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AJ720910 IPI:IPI00593383
RefSeq:NP_001012869.1 UniGene:Gga.2762 ProteinModelPortal:Q5ZI74
SMR:Q5ZI74 GeneID:420376 KEGG:gga:420376 InParanoid:Q5ZI74
NextBio:20823291 Uniprot:Q5ZI74
Length = 1231
Score = 541 (195.5 bits), Expect = 2.7e-71, Sum P(2) = 2.7e-71
Identities = 130/367 (35%), Positives = 200/367 (54%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E V+D DL+ DLV +D G IL FLPG EI + RL G +S +L L
Sbjct: 689 DECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM--LGSQNSRYLVLP 746
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQ+ +F RPP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 747 VHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKV 806
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R +K M YQVPE+ R PL L +Q
Sbjct: 807 SCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDK-MPTYQVPEILRTPLENLVVQ 865
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKAL+ P +A+ A+ +L E+G ++ E LT LG LA++ D
Sbjct: 866 AKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPR 925
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ I+ CL P+L I + L+ + PF + V++AK L S +
Sbjct: 926 LAKAIVLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVL----------SRE 974
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L +R ++A + Y+L + I + QF L +
Sbjct: 975 SG--SDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEA 1032
Query: 527 GLINLPN 533
L++ P+
Sbjct: 1033 FLVSSPS 1039
Score = 221 (82.9 bits), Expect = 2.7e-71, Sum P(2) = 2.7e-71
Identities = 45/88 (51%), Positives = 63/88 (71%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQG+ +L GV+HV+VDEVHER + DFLLI+LK + +K + P L+++LMSAT D+
Sbjct: 588 LQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGI-QKLN----PDLRLVLMSATGDNQR 642
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FS YFG CPV+ G +PV Y+LE++
Sbjct: 643 FSHYFGGCPVVKVPGFMYPVKEYYLEEI 670
Score = 162 (62.1 bits), Expect = 9.5e-26, Sum P(2) = 9.5e-26
Identities = 60/239 (25%), Positives = 108/239 (45%)
Query: 471 SDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLIN 530
SDHL + A W+++L +R ++A + Y+L + I + QF L + L++
Sbjct: 977 SDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEAFLVS 1036
Query: 531 LPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAAL 590
P+ D S + N Y+ +VK +L AGLYPN+ QG
Sbjct: 1037 SPS------------DCTMP--SSVCNQYSEEEELVKGVLMAGLYPNLIQVRQG------ 1076
Query: 591 SNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETNK-VFLRD 648
+ + K + Y + V +H S+IN + +L + V++N VF+RD
Sbjct: 1077 ---KVTRQGKFKPNSYAYRTKAGTVLLHKSTINREASKLYSRWLTYFMAVKSNGGVFVRD 1133
Query: 649 TTIVSPFSILLFGGS-INVQHQTGQVTI---DGWLKVT-APAQTAVLFKELRLTLHSIL 702
++ V P ++LL + I+V+ + T+ D L V + T L ++ R++L ++
Sbjct: 1134 SSQVHPLAVLLMTDTDIHVRDDGWRATVSLTDSDLLVLEGDSYTIRLLRDFRVSLSKMV 1192
>UNIPROTKB|F1SLI4 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0042645 "mitochondrial nucleoid" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:CU633694 Ensembl:ENSSSCT00000012419
Uniprot:F1SLI4
Length = 1222
Score = 528 (190.9 bits), Expect = 6.5e-70, Sum P(2) = 6.5e-70
Identities = 130/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 674 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 731
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 732 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 791
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 792 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 850
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 851 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 910
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 911 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 959
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 960 SG--SDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1017
Query: 527 GLINLPN 533
L+ P+
Sbjct: 1018 FLVGKPS 1024
Score = 221 (82.9 bits), Expect = 6.5e-70, Sum P(2) = 6.5e-70
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 572 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 626
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 627 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 654
Score = 168 (64.2 bits), Expect = 2.2e-26, Sum P(2) = 2.2e-26
Identities = 60/252 (23%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 957 SHDSG--SDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENI 1014
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ P+ D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 1015 YEAFLVGKPS------------DCTLA--SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1060
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1061 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1111
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L +ELR
Sbjct: 1112 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRR 1171
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1172 ALGRMVERSLRS 1183
>UNIPROTKB|H7BXY3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HGNC:HGNC:16716 EMBL:AC139667 EMBL:AC026318
ProteinModelPortal:H7BXY3 SMR:H7BXY3 PRIDE:H7BXY3
Ensembl:ENST00000348968 Bgee:H7BXY3 Uniprot:H7BXY3
Length = 1166
Score = 527 (190.6 bits), Expect = 6.5e-70, Sum P(2) = 6.5e-70
Identities = 130/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 618 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 675
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 676 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 735
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 736 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 794
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 795 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 854
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 855 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 903
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 904 SG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 961
Query: 527 GLINLPN 533
L+ P+
Sbjct: 962 FLVGKPS 968
Score = 221 (82.9 bits), Expect = 6.5e-70, Sum P(2) = 6.5e-70
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 516 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 570
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 571 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 598
Score = 170 (64.9 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 61/252 (24%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 901 SHDSG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENI 958
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ P+ D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 959 YEAFLVGKPS------------DCTLA--SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1004
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1005 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1055
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L KELR
Sbjct: 1056 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLKELRR 1115
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1116 ALGRMVERSLRS 1127
>UNIPROTKB|J9P3P6 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047198
Uniprot:J9P3P6
Length = 1135
Score = 526 (190.2 bits), Expect = 7.3e-70, Sum P(2) = 7.3e-70
Identities = 129/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 703
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSIT++D+V+V D G HKE RY+ + K+
Sbjct: 704 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKV 763
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 764 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 822
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 823 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 882
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 883 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 931
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 932 SG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 527 GLINLPN 533
L+ P+
Sbjct: 990 FLVGKPS 996
Score = 221 (82.9 bits), Expect = 7.3e-70, Sum P(2) = 7.3e-70
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 544 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 598
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 599 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 626
Score = 147 (56.8 bits), Expect = 2.8e-24, Sum P(2) = 2.8e-24
Identities = 52/215 (24%), Positives = 96/215 (44%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 929 SHDSG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENI 986
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ P+ D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 987 YEAFLVGKPS------------DCTLA--SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1032
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1033 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1083
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTI 675
VF+RD++ V P ++LL G ++++ + TI
Sbjct: 1084 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATI 1118
>UNIPROTKB|Q7L2E3 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0042645 "mitochondrial nucleoid" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:AB020697 EMBL:AK002076
EMBL:AK291266 EMBL:BC014237 EMBL:BC015029 EMBL:BC020126
EMBL:BC038417 IPI:IPI00411733 IPI:IPI00926109 IPI:IPI00927809
PIR:E56236 RefSeq:NP_055781.2 RefSeq:NP_619520.1 UniGene:Hs.517948
PDB:2DB2 PDBsum:2DB2 ProteinModelPortal:Q7L2E3 SMR:Q7L2E3
IntAct:Q7L2E3 MINT:MINT-1186537 STRING:Q7L2E3 PhosphoSite:Q7L2E3
DMDM:74758997 PaxDb:Q7L2E3 PRIDE:Q7L2E3 DNASU:22907
Ensembl:ENST00000445061 Ensembl:ENST00000446256
Ensembl:ENST00000457607 GeneID:22907 KEGG:hsa:22907 UCSC:uc003crt.3
UCSC:uc003cru.3 GeneCards:GC03P047844 HGNC:HGNC:16716 HPA:HPA034806
neXtProt:NX_Q7L2E3 PharmGKB:PA27217 InParanoid:Q7L2E3 OMA:LHKEERY
PhylomeDB:Q7L2E3 EvolutionaryTrace:Q7L2E3 GenomeRNAi:22907
NextBio:43571 ArrayExpress:Q7L2E3 Bgee:Q7L2E3 CleanEx:HS_DHX30
Genevestigator:Q7L2E3 Uniprot:Q7L2E3
Length = 1194
Score = 527 (190.6 bits), Expect = 7.4e-70, Sum P(2) = 7.4e-70
Identities = 130/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 703
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 704 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 763
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 764 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 822
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 823 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 882
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 883 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 931
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 932 SG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 527 GLINLPN 533
L+ P+
Sbjct: 990 FLVGKPS 996
Score = 221 (82.9 bits), Expect = 7.4e-70, Sum P(2) = 7.4e-70
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 544 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 598
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 599 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 626
Score = 170 (64.9 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 61/252 (24%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 929 SHDSG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENI 986
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ P+ D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 987 YEAFLVGKPS------------DCTLA--SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1032
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1033 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1083
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L KELR
Sbjct: 1084 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLKELRR 1143
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1144 ALGRMVERSLRS 1155
>UNIPROTKB|F1N0J0 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 IPI:IPI00717186 UniGene:Bt.24588 OMA:LHKEERY
EMBL:DAAA02054438 Ensembl:ENSBTAT00000030623 Uniprot:F1N0J0
Length = 1220
Score = 528 (190.9 bits), Expect = 8.2e-70, Sum P(2) = 8.2e-70
Identities = 131/367 (35%), Positives = 202/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 672 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 729
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 730 VHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 789
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK M P+QVPE+ R PL L LQ
Sbjct: 790 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MAPFQVPEILRTPLENLVLQ 848
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 849 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 908
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 909 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 957
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 958 SG--SDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1015
Query: 527 GLINLPN 533
L+ P+
Sbjct: 1016 FLVGKPS 1022
Score = 220 (82.5 bits), Expect = 8.2e-70, Sum P(2) = 8.2e-70
Identities = 47/88 (53%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HV+VDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 570 LQSNPSLEGVSHVVVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 624
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 625 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 652
Score = 168 (64.2 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 60/252 (23%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 955 SHDSG--SDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENI 1012
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ P+ D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 1013 YEAFLVGKPS------------DCTLA--SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1058
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1059 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1109
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L +ELR
Sbjct: 1110 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRR 1169
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1170 ALGRMVERSLRS 1181
>UNIPROTKB|J9P264 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AAEX03012236 Ensembl:ENSCAFT00000047330
Uniprot:J9P264
Length = 1219
Score = 526 (190.2 bits), Expect = 1.0e-69, Sum P(2) = 1.0e-69
Identities = 129/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 677 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 734
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSIT++D+V+V D G HKE RY+ + K+
Sbjct: 735 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKV 794
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 795 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 853
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 854 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 913
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 914 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 962
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 963 SG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1020
Query: 527 GLINLPN 533
L+ P+
Sbjct: 1021 FLVGKPS 1027
Score = 221 (82.9 bits), Expect = 1.0e-69, Sum P(2) = 1.0e-69
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 572 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 626
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 627 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 654
Score = 167 (63.8 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 60/252 (23%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 960 SHDSG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENI 1017
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ P+ D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 1018 YEAFLVGKPS------------DCTLA--SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1063
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1064 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1114
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L +ELR
Sbjct: 1115 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRR 1174
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1175 ALGRMVERSLRS 1186
>UNIPROTKB|E2RL62 [details] [associations]
symbol:DHX30 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:LHKEERY EMBL:AAEX03012236
Ensembl:ENSCAFT00000020710 NextBio:20852259 Uniprot:E2RL62
Length = 1222
Score = 526 (190.2 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 129/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 674 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 731
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSIT++D+V+V D G HKE RY+ + K+
Sbjct: 732 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKV 791
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 792 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 850
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 851 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 910
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 911 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 959
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 960 SG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1017
Query: 527 GLINLPN 533
L+ P+
Sbjct: 1018 FLVGKPS 1024
Score = 221 (82.9 bits), Expect = 1.1e-69, Sum P(2) = 1.1e-69
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 572 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 626
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 627 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 654
Score = 167 (63.8 bits), Expect = 2.8e-26, Sum P(2) = 2.8e-26
Identities = 60/252 (23%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 957 SHDSG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENI 1014
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ P+ D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 1015 YEAFLVGKPS------------DCTLA--SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1060
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1061 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1111
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L +ELR
Sbjct: 1112 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRR 1171
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1172 ALGRMVERSLRS 1183
>RGD|1308888 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA;ISO;ISS] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0042645
"mitochondrial nucleoid" evidence=IEA;ISO;ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOGENOM:HOG000112212 HOVERGEN:HBG081437 KO:K13185 OrthoDB:EOG4VHK5M
EMBL:BC091359 IPI:IPI00949701 RefSeq:NP_001013267.1
UniGene:Rn.163034 ProteinModelPortal:Q5BJS0 SMR:Q5BJS0
PhosphoSite:Q5BJS0 PRIDE:Q5BJS0 Ensembl:ENSRNOT00000064600
GeneID:367172 KEGG:rno:367172 UCSC:RGD:1308888 NextBio:690809
ArrayExpress:Q5BJS0 Genevestigator:Q5BJS0
GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 524 (189.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 129/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 703
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSIT++D+V+V D G HKE RY+ + K+
Sbjct: 704 VHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKV 763
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 764 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 822
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 823 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 882
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 883 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 931
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 932 SG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 527 GLINLPN 533
L+ P+
Sbjct: 990 FLVGKPS 996
Score = 221 (82.9 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 544 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 598
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 599 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 626
Score = 166 (63.5 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 61/252 (24%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 929 SHDSG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENI 986
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ GK D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 987 YEAFLV---------GKPSD-----CTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1032
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1033 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1083
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L +ELR
Sbjct: 1084 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRR 1143
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1144 ALGRMVERSLRS 1155
>UNIPROTKB|Q5BJS0 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1308888 GO:GO:0005524 GO:GO:0003682
GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OrthoDB:EOG4VHK5M EMBL:BC091359 IPI:IPI00949701
RefSeq:NP_001013267.1 UniGene:Rn.163034 ProteinModelPortal:Q5BJS0
SMR:Q5BJS0 PhosphoSite:Q5BJS0 PRIDE:Q5BJS0
Ensembl:ENSRNOT00000064600 GeneID:367172 KEGG:rno:367172
UCSC:RGD:1308888 NextBio:690809 ArrayExpress:Q5BJS0
Genevestigator:Q5BJS0 GermOnline:ENSRNOG00000029194 Uniprot:Q5BJS0
Length = 1194
Score = 524 (189.5 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 129/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 703
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSIT++D+V+V D G HKE RY+ + K+
Sbjct: 704 VHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKV 763
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 764 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 822
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 823 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 882
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 883 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 931
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 932 SG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 527 GLINLPN 533
L+ P+
Sbjct: 990 FLVGKPS 996
Score = 221 (82.9 bits), Expect = 1.6e-69, Sum P(2) = 1.6e-69
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 544 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 598
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 599 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 626
Score = 166 (63.5 bits), Expect = 3.3e-26, Sum P(2) = 3.3e-26
Identities = 61/252 (24%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 929 SHDSG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENI 986
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ GK D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 987 YEAFLV---------GKPSD-----CTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1032
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1033 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1083
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L +ELR
Sbjct: 1084 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRR 1143
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1144 ALGRMVERSLRS 1155
>MGI|MGI:1920081 [details] [associations]
symbol:Dhx30 "DEAH (Asp-Glu-Ala-His) box polypeptide 30"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0042645 "mitochondrial
nucleoid" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 MGI:MGI:1920081 GO:GO:0005524
GO:GO:0003682 GO:GO:0003723 GO:GO:0042645 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
GeneTree:ENSGT00700000104393 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
KO:K13185 OMA:LHKEERY EMBL:AB047557 EMBL:AK146326 EMBL:AK148778
EMBL:AK153969 EMBL:BC004082 EMBL:BC016202 IPI:IPI00127902
IPI:IPI00270064 IPI:IPI00761204 RefSeq:NP_001239611.1
RefSeq:NP_001239612.1 RefSeq:NP_579925.1 UniGene:Mm.276305
ProteinModelPortal:Q99PU8 SMR:Q99PU8 PhosphoSite:Q99PU8
PaxDb:Q99PU8 PRIDE:Q99PU8 Ensembl:ENSMUST00000035056
Ensembl:ENSMUST00000062368 Ensembl:ENSMUST00000111991
Ensembl:ENSMUST00000136969 Ensembl:ENSMUST00000142911
Ensembl:ENSMUST00000148287 Ensembl:ENSMUST00000165596 GeneID:72831
KEGG:mmu:72831 UCSC:uc009rtg.1 UCSC:uc009rth.1 UCSC:uc009rti.1
ChiTaRS:DHX30 NextBio:337009 Bgee:Q99PU8 CleanEx:MM_DHX30
Genevestigator:Q99PU8 GermOnline:ENSMUSG00000032480 Uniprot:Q99PU8
Length = 1217
Score = 524 (189.5 bits), Expect = 1.7e-69, Sum P(2) = 1.7e-69
Identities = 129/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 669 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 726
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSIT++D+V+V D G HKE RY+ + K+
Sbjct: 727 VHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKV 786
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 787 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 845
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 846 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 905
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 906 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 954
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 955 SG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1012
Query: 527 GLINLPN 533
L+ P+
Sbjct: 1013 FLVGKPS 1019
Score = 221 (82.9 bits), Expect = 1.7e-69, Sum P(2) = 1.7e-69
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 567 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 621
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 622 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 649
Score = 162 (62.1 bits), Expect = 9.2e-26, Sum P(2) = 9.2e-26
Identities = 60/252 (23%), Positives = 113/252 (44%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 952 SHDSG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENI 1009
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ GK D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 1010 YEAFLV---------GKPSD-----CTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1055
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1056 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1106
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L +E R
Sbjct: 1107 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLREFRR 1166
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1167 ALGRMVERSLRS 1178
>UNIPROTKB|D4A1V3 [details] [associations]
symbol:Dhx30 "Putative ATP-dependent RNA helicase DHX30"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1308888 GO:GO:0005524 GO:GO:0003682 GO:GO:0003676 GO:GO:0042645
EMBL:CH473954 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:LHKEERY
UniGene:Rn.163034 IPI:IPI00203041 Ensembl:ENSRNOT00000045878
Uniprot:D4A1V3
Length = 1222
Score = 524 (189.5 bits), Expect = 1.7e-69, Sum P(2) = 1.7e-69
Identities = 129/367 (35%), Positives = 203/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 674 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 731
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSIT++D+V+V D G HKE RY+ + K+
Sbjct: 732 VHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKV 791
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 792 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 850
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 851 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 910
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 911 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 959
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 960 SG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1017
Query: 527 GLINLPN 533
L+ P+
Sbjct: 1018 FLVGKPS 1024
Score = 221 (82.9 bits), Expect = 1.7e-69, Sum P(2) = 1.7e-69
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 572 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 626
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 627 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 654
Score = 166 (63.5 bits), Expect = 3.5e-26, Sum P(2) = 3.5e-26
Identities = 61/252 (24%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 957 SHDSG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENI 1014
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ GK D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 1015 YEAFLV---------GKPSD-----CTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1060
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1061 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1111
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L +ELR
Sbjct: 1112 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRR 1171
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1172 ALGRMVERSLRS 1183
>UNIPROTKB|Q2NKY8 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9913 "Bos taurus" [GO:0042645 "mitochondrial nucleoid"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003682 GO:GO:0003723 GO:GO:0042645
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:BC111349
IPI:IPI00717186 RefSeq:NP_001070003.1 UniGene:Bt.24588
ProteinModelPortal:Q2NKY8 SMR:Q2NKY8 PRIDE:Q2NKY8 GeneID:767607
KEGG:bta:767607 CTD:22907 HOGENOM:HOG000112212 HOVERGEN:HBG081437
InParanoid:Q2NKY8 KO:K13185 OrthoDB:EOG4VHK5M NextBio:20918019
Uniprot:Q2NKY8
Length = 1220
Score = 528 (190.9 bits), Expect = 3.5e-69, Sum P(2) = 3.5e-69
Identities = 131/367 (35%), Positives = 202/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 672 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 729
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 730 VHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 789
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK M P+QVPE+ R PL L LQ
Sbjct: 790 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MAPFQVPEILRTPLENLVLQ 848
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 849 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 908
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 909 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 957
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 958 SG--SDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1015
Query: 527 GLINLPN 533
L+ P+
Sbjct: 1016 FLVGKPS 1022
Score = 214 (80.4 bits), Expect = 3.5e-69, Sum P(2) = 3.5e-69
Identities = 46/88 (52%), Positives = 61/88 (69%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HV+VDE HER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 570 LQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 624
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 625 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 652
Score = 168 (64.2 bits), Expect = 1.3e-25, Sum P(2) = 1.3e-25
Identities = 60/252 (23%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 955 SHDSG--SDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENI 1012
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ P+ D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 1013 YEAFLVGKPS------------DCTLA--SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1058
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1059 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1109
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L +ELR
Sbjct: 1110 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLRELRR 1169
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1170 ALGRMVERSLRS 1181
>MGI|MGI:1918973 [details] [associations]
symbol:Dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide 34"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005622
"intracellular" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00355 SMART:SM00490 SMART:SM00847
MGI:MGI:1918973 GO:GO:0005524 GO:GO:0008270 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
CTD:9704 HOGENOM:HOG000232193 ChiTaRS:DHX34 EMBL:AK129062
EMBL:AK004733 IPI:IPI00113303 RefSeq:NP_082159.3 UniGene:Mm.75259
ProteinModelPortal:Q9DBV3 SMR:Q9DBV3 PhosphoSite:Q9DBV3
PaxDb:Q9DBV3 PRIDE:Q9DBV3 Ensembl:ENSMUST00000094816
Ensembl:ENSMUST00000163968 GeneID:71723 KEGG:mmu:71723
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 NextBio:334335
Bgee:Q9DBV3 CleanEx:MM_DHX34 Genevestigator:Q9DBV3
GermOnline:ENSMUSG00000006019 Uniprot:Q9DBV3
Length = 1145
Score = 488 (176.8 bits), Expect = 7.3e-68, Sum P(3) = 7.3e-68
Identities = 110/267 (41%), Positives = 157/267 (58%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRK 250
G +LVFL G+AEI +LD A+ + + W+ L LHS+++ DQ KVF P +RK
Sbjct: 381 GDLLVFLSGMAEITTVLD---AAQAYASLTQRWVVLPLHSALSVSDQDKVFDVAPAGVRK 437
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXV 310
I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WIS
Sbjct: 438 CILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 497
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
PG+CY LY Y+ PY VPE++R+ L L LQ+K +S+G + F +EPP
Sbjct: 498 GPGVCYRLYAESDYDAFA-PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPA 554
Query: 371 AITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFL 430
++ TAI L E GA++ E LTP+G LA+LPVDV+IGKM++ G +F P+L+I+A L
Sbjct: 555 SVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAAL 614
Query: 431 SYKSPFIYPKDEKQNVERAKLALLTDK 457
S +SPF + A+ L +D+
Sbjct: 615 SVQSPFTRSAQSNLDCATARRPLESDQ 641
Score = 282 (104.3 bits), Expect = 2.8e-43, Sum P(3) = 2.8e-43
Identities = 72/201 (35%), Positives = 114/201 (56%)
Query: 330 PYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE 389
PY VPE++R+ L L LQ+K +S+G + F +EPP ++ TAI L E GA++ E
Sbjct: 516 PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPASVETAILYLQEQGALDSSE 573
Query: 390 ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
LTP+G LA+LPVDV+IGKM++ G +F P+L+I+A LS +SPF + + N++
Sbjct: 574 ALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVLTIAAALSVQSPFT--RSAQSNLD-- 629
Query: 450 KLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVM 509
A LE SD Q D L + W ++ +R + +++C + + +
Sbjct: 630 -CATARRPLE--SD------QGDPFTLFNVFNAWVQVKSERSGNS-RKWCRRRGVEEHRL 679
Query: 510 YMIRDMRIQFGTLLADIGLIN 530
Y + ++R QF LL D GL++
Sbjct: 680 YEMANLRRQFKELLEDHGLLS 700
Score = 180 (68.4 bits), Expect = 7.3e-68, Sum P(3) = 7.3e-68
Identities = 52/133 (39%), Positives = 72/133 (54%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q + +L +IVDEVHER L DFLL VL+ LL ++ P LKVILMSAT++ +L
Sbjct: 266 IQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQR-----PDLKVILMSATINISL 320
Query: 66 FSRYFGDCPVITAEGRTHPVTT-YFLEDVYESINYRLALDSAAAIRY-EASSKSGPVNNR 123
FS YF PV+ GR P+T Y ++ ++ + LD +R EA P R
Sbjct: 321 FSSYFSHAPVVQVPGRLFPITVVYQPQEADQTASKSEKLDPRPFLRVLEAIDNKYPPEER 380
Query: 124 RGKKNLVLSGWGD 136
G + LSG +
Sbjct: 381 -GDLLVFLSGMAE 392
Score = 132 (51.5 bits), Expect = 7.3e-68, Sum P(3) = 7.3e-68
Identities = 53/202 (26%), Positives = 90/202 (44%)
Query: 540 KKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSN--LRKSS 597
K + +L+ + S ++ + +++K +L GLYP +A + +G S+ +
Sbjct: 774 KLRHNLEQLQAAASSAQDLTRDQLALLKLVLGRGLYPQLAVPDAFNSGRKDSDQIFHTQA 833
Query: 598 NSAAKAHP--VWYDGRREVHIHPSSINSQ--------LKSFEHPFLVFLEKVETNKVFLR 647
HP V+ + +H + Q S +H L F+ +ETNK +L
Sbjct: 834 KQGTVLHPTCVFANSPEVLHTQGQEASGQEGSQDGRDQMSCKHQLLAFVSLLETNKPYLV 893
Query: 648 DTTIVSPF-SILLFGGSINVQHQTGQVTIDGWLKVT-APAQTAV--LFKELRLTLH--SI 701
+ + S+LLF SI+ ++ DGWL++ A +++AV L LRL H S
Sbjct: 894 NCVRIPALQSLLLFSRSIDTNGDCSRLVADGWLELQLADSESAVRLLATSLRLRAHWESA 953
Query: 702 L-RQMIRNPQNSTIANNEVVKS 722
L RQ+ R Q + E V S
Sbjct: 954 LDRQLARQAQRRKLEQEEDVGS 975
>UNIPROTKB|Q5R607 [details] [associations]
symbol:DHX30 "Putative ATP-dependent RNA helicase DHX30"
species:9601 "Pongo abelii" [GO:0003682 "chromatin binding"
evidence=ISS] [GO:0042645 "mitochondrial nucleoid" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS50137 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003682 GO:GO:0003723
GO:GO:0042645 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 CTD:22907
HOVERGEN:HBG081437 KO:K13185 EMBL:CR858337 EMBL:CR860693
RefSeq:NP_001125306.1 UniGene:Pab.19257 ProteinModelPortal:Q5R607
SMR:Q5R607 PRIDE:Q5R607 GeneID:100172205 KEGG:pon:100172205
InParanoid:Q5R607 Uniprot:Q5R607
Length = 1194
Score = 518 (187.4 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
Identities = 128/367 (34%), Positives = 202/367 (55%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 703
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETS TI+D+V+V D G HKE RY+ + K+
Sbjct: 704 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKV 763
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 764 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 822
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + +
Sbjct: 823 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPR 882
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF QN RA++ DK++ L S+D
Sbjct: 883 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPF---SSSLQN--RAEV----DKVKALL-SHD 931
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 932 SG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 527 GLINLPN 533
L+ P+
Sbjct: 990 FLVGKPS 996
Score = 221 (82.9 bits), Expect = 3.3e-67, Sum P(2) = 3.3e-67
Identities = 48/88 (54%), Positives = 62/88 (70%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L Q + P L+++LMSAT D+
Sbjct: 544 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL---QRLN--PALRLVLMSATGDNER 598
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 599 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 626
Score = 170 (64.9 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 61/252 (24%), Positives = 114/252 (45%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S+DS SDHL + A W+++L + + + + + L + + I + QF +
Sbjct: 929 SHDSG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENI 986
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
+ L+ P+ D + S N Y+ +VK +L AGLYPN+ Q
Sbjct: 987 YEAFLVGKPS------------DCTLA--SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQ 1032
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G + + K + V Y + + +H S+IN + +L + V++N
Sbjct: 1033 G---------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSN 1083
Query: 643 -KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTID----GWLKVTAPAQTAVLFKELRL 696
VF+RD++ V P ++LL G ++++ + TI L++ ++T L KELR
Sbjct: 1084 GSVFVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLKELRR 1143
Query: 697 TLHSILRQMIRN 708
L ++ + +R+
Sbjct: 1144 ALGRMVERSLRS 1155
>POMBASE|SPBC15C4.05 [details] [associations]
symbol:SPBC15C4.05 "ATP-dependent RNA/DNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPBC15C4.05 GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GO:GO:0003676 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 PIR:T39475 RefSeq:NP_595925.1
ProteinModelPortal:O60114 EnsemblFungi:SPBC15C4.05.1 GeneID:2539831
KEGG:spo:SPBC15C4.05 OrthoDB:EOG4TXG12 NextBio:20800979
Uniprot:O60114
Length = 1428
Score = 533 (192.7 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 126/414 (30%), Positives = 224/414 (54%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEG----AILVFLPGVAEIHILLDRLAASYRFGGPSSDW 224
NE I+Y L+ L+ ++ T G+ +LVFLPG++EI + + F
Sbjct: 878 NEKAINYGLIVYLLKYIF-TEGDPKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFC 936
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
+ LHS+++S Q+ VF PP+ RK++++TNIAET +TI DV V D G H+E RYNS+
Sbjct: 937 IYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSR 996
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+ LS + + ++S V+ GICY L+++ +++ YQ PE+ R+ L E+
Sbjct: 997 RHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEV 1056
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
L++K+ +G ++ L KAL+PP I A+ L++VGA+ +E+LT LG L++LPVD
Sbjct: 1057 VLRVKMCQMGDVQDVLGKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVD 1116
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
+GK+++ G + C+ SI A L+ SPF D + + +A+L+ +
Sbjct: 1117 ANLGKILVLGCFYKCVDAASSIVAMLTIGSPFRKSVDNEFSANKARLSFAKE-------- 1168
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLA 524
+T+SD +++ AY W++I L F + +L+ + M ++IQ + L
Sbjct: 1169 ---NTRSDLVLMYYAYCAWREICLSPLGPDEDSFAKEKYLNLEALSMTESLKIQLLSELK 1225
Query: 525 DIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNV 578
D+ L+ + + K+ + F+ + ++ + ++ I+ ++ A LYPN+
Sbjct: 1226 DMKLLGASDVDTCKSLKRS-ICRRFAVIPKEHDINSGNAEILCGVIAASLYPNI 1278
Score = 187 (70.9 bits), Expect = 1.4e-66, Sum P(2) = 1.4e-66
Identities = 48/131 (36%), Positives = 73/131 (55%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+ + VTH+I+DEVHERS+ D LLI + LL KQ H P LK+I+MSAT+++
Sbjct: 743 LEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLL-KQ--H--PHLKIIIMSATLNAEK 797
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAA---IR---YEASSKSGP 119
F YF +IT G+T+PV ++LED+ + +AA I YE +
Sbjct: 798 FQLYFEGSNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQQDAS 857
Query: 120 VNNRRGKKNLV 130
++N+ + +V
Sbjct: 858 ISNKSAEDAIV 868
>POMBASE|SPCC895.09c [details] [associations]
symbol:ucp12 "ATP-dependent RNA helicase Ucp12
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005524
"ATP binding" evidence=ISS] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008150 "biological_process" evidence=ND] [GO:0043130
"ubiquitin binding" evidence=ISM] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908
PROSITE:PS51194 SMART:SM00490 SMART:SM00591 SMART:SM00847
PomBase:SPCC895.09c GO:GO:0005829 GO:GO:0005524 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0003676 PROSITE:PS50030
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043130 SUPFAM:SSF46934 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 PIR:T41647
RefSeq:NP_588050.1 ProteinModelPortal:O94536
EnsemblFungi:SPCC895.09c.1 GeneID:2539263 KEGG:spo:SPCC895.09c
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS NextBio:20800433
Uniprot:O94536
Length = 1327
Score = 463 (168.0 bits), Expect = 9.4e-66, Sum P(3) = 9.4e-66
Identities = 117/298 (39%), Positives = 169/298 (56%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGE--GAILVFLPGVAEIHILLDRLAASYRFGGPSSD 223
++ E IDY L+ LV +D G G+ILVFLPGV+ I + + + G +
Sbjct: 786 RKKKEYEIDYHLISRLVSSIDAELGSSSGSILVFLPGVSNIARCIREIKSK---DGSKFE 842
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L LH+S+ + +Q++ F + K RK+I ATNIAETSITIDDVV V D GR K+ Y+
Sbjct: 843 -VLPLHASLNTSEQRRCF-KTYTK-RKIICATNIAETSITIDDVVAVIDSGRVKQIDYDV 899
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
++ L + E W S VK GICY LYTR EK M PE+ R L +
Sbjct: 900 ERDLVTFKETWASRAACQQRRGRAGRVKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQ 959
Query: 344 LCLQIKLL-----------SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT 392
+CL + L + G IK F++ ++PP + + A+ L +VGA+ E+LT
Sbjct: 960 VCLNVVPLVKRFSSAGNSVNQGSIKKFMNSLIDPPNDATVDLALKKLIQVGALTVSEDLT 1019
Query: 393 PLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAK 450
LG +L LP+D+ +GK+++FG IFG L P L+I+A LS KSPF+ DE + + R+K
Sbjct: 1020 GLGEYLVSLPIDLKLGKLLVFGSIFGYLEPALTITAILSTKSPFL-GDDEAREI-RSK 1075
Score = 178 (67.7 bits), Expect = 9.4e-66, Sum P(3) = 9.4e-66
Identities = 39/87 (44%), Positives = 56/87 (64%)
Query: 12 LTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFG 71
L+ ++ V+VDEVHERS+ D LL +LK ++ + P LKVILMSATV+S+ F YFG
Sbjct: 694 LSTLSCVVVDEVHERSIENDILLTLLKLVISR-----IPNLKVILMSATVNSDTFKYYFG 748
Query: 72 DCPVITAEGRTHPVTTYFLEDVYESIN 98
+ + GRT P+ Y++ED +N
Sbjct: 749 NAGHLHIHGRTFPIKDYYIEDFAPKLN 775
Score = 150 (57.9 bits), Expect = 9.4e-66, Sum P(3) = 9.4e-66
Identities = 65/252 (25%), Positives = 108/252 (42%)
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S S D L Y W +IL RG K Q+C + L + + IR R +
Sbjct: 1074 SKQSQGWGDVLADARVYHNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNRNELSEAA 1133
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAAT-- 581
L+ L K TG + D W+S E N+ +++ ++ A L PNV
Sbjct: 1134 Q---LLELTTKKLTG-----NFD-WYSTE----NL-----TVLSTLIAAALSPNVVKCVY 1175
Query: 582 EQGVAGAALSNLRKSSNSAAKAHPVWYD-GRREVHIHPSS---INSQLKSFEHPFLVFLE 637
A+ S + A +YD + + IHPSS +NS S F+ + +
Sbjct: 1176 PDKKFVASFSGSLEMEQEARLTK--FYDQNNQRLFIHPSSTMFVNSPNAS-RCTFVAYEQ 1232
Query: 638 KVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQ-VTIDGWLKVTAPAQTAVLFKELRL 696
KVET K FLR+ T ++ + ++L G + + G+ + +D + A + +L K L+
Sbjct: 1233 KVETTKPFLRNCTPINTYGMILLGANDILIDPLGKGLILDQAYCIKAWPKVVILLKMLKR 1292
Query: 697 TLHSILRQMIRN 708
L + L + + +
Sbjct: 1293 CLDASLHERLES 1304
Score = 47 (21.6 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 17/53 (32%), Positives = 24/53 (45%)
Query: 619 SSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV--SPFSILLFGGSINVQHQ 669
SSI+++L S LVFL V +R+ S F +L S+N Q
Sbjct: 803 SSIDAELGSSSGSILVFLPGVSNIARCIREIKSKDGSKFEVLPLHASLNTSEQ 855
Score = 41 (19.5 bits), Expect = 2.0e-51, Sum P(3) = 2.0e-51
Identities = 19/88 (21%), Positives = 41/88 (46%)
Query: 93 VYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKNLVLSGWGDDSLLSEEYINXXXXXX 152
+Y ++ A + AA R +++K P +++ +K + L+ + SL N
Sbjct: 188 LYNEDPFKAAKELQAA-RASSAAKPPPKASQKNEK-VSLTSIKNTSLSHFSKFNFKYALP 245
Query: 153 XXXXXXEQTRQNLKRLNEDVIDYDLLED 180
+ R++L+ L ++ +D+LED
Sbjct: 246 IHMSL--ENRRSLENLFRNMNTWDILED 271
>UNIPROTKB|E2RTK4 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006692 Uniprot:E2RTK4
Length = 1140
Score = 475 (172.3 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 107/267 (40%), Positives = 156/267 (58%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRK 250
G +LVFL G+AEI +L+ A+ + + W+ L LHS+++ DQ KVF P +RK
Sbjct: 378 GDLLVFLSGMAEISSVLE---AAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRK 434
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXV 310
I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WIS
Sbjct: 435 CILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRT 494
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
PG+C+ LY Y+ PY VPE++R+ L L LQ+K +S+G + F +EPP
Sbjct: 495 GPGVCFRLYAESDYDAFA-PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPA 551
Query: 371 AITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFL 430
++ TAI L + GA++ E LTP+G LA+LPVDV+IGKM++ G +F P+L+I+A L
Sbjct: 552 SLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAAL 611
Query: 431 SYKSPFIYPKDEKQNVERAKLALLTDK 457
S +SPF A+ L +D+
Sbjct: 612 SVQSPFTRSAQSNPECAAARRPLESDQ 638
Score = 276 (102.2 bits), Expect = 8.7e-42, Sum P(3) = 8.7e-42
Identities = 72/200 (36%), Positives = 113/200 (56%)
Query: 330 PYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE 389
PY VPE++R+ L L LQ+K +S+G + F +EPP ++ TAI L + GA++ E
Sbjct: 513 PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPASLETAILYLQDQGALDSSE 570
Query: 390 ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
LTP+G LA+LPVDV+IGKM++ G +F P+L+I+A LS +SPF + + N E
Sbjct: 571 ALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQSPFT--RSAQSNPE-- 626
Query: 450 KLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVM 509
A LE SD Q D L + W ++ +R ++ ++++C + +
Sbjct: 627 -CAAARRPLE--SD------QGDPFTLFNVFNAWVQVKSER-SRNSRKWCRHRGIEEHRL 676
Query: 510 YMIRDMRIQFGTLLADIGLI 529
Y + ++R QF LL D GL+
Sbjct: 677 YEMANLRRQFKELLEDHGLL 696
Score = 194 (73.4 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 56/139 (40%), Positives = 74/139 (53%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q + +L +IVDEVHER L DFLL VL+ LL K+ P LKVILMSAT++ +L
Sbjct: 263 IQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKR-----PDLKVILMSATINISL 317
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLA-LDSAAAIRY-EASSKSGPVNNR 123
FS YFG PV+ GR P+T + E + + LD +R EA P R
Sbjct: 318 FSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEER 377
Query: 124 RGKKNLVLSGWGDDSLLSE 142
G + LSG + S + E
Sbjct: 378 -GDLLVFLSGMAEISSVLE 395
Score = 110 (43.8 bits), Expect = 3.2e-65, Sum P(3) = 3.2e-65
Identities = 46/183 (25%), Positives = 81/183 (44%)
Query: 542 KDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSN--LRKSSNS 599
+ LD + S ++ + +++K +L GLYP +A + + S+ S
Sbjct: 769 RHSLDQLQAATSSAQDLTRDQMALLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQSKQ 828
Query: 600 AAKAHP--VWYDGRREVHIHPS----SINSQ----LKSFEHPFLVFLEKVETNKVFLRDT 649
HP ++ + +H S SQ S +H L F+ +ETNK +L +
Sbjct: 829 GTVLHPTCIFANSPEVLHAQEQEARGSEGSQDDKDKMSSKHQLLTFVSLLETNKPYLVNC 888
Query: 650 TIVSPF-SILLFGGSINVQHQTGQVTIDGWLKVT-APAQTAV--LFKELRLTLH--SILR 703
+ S+LLF S++ ++ DGWL++ A +++AV L +RL H S L
Sbjct: 889 VRIPALQSLLLFSRSLDTNGDCSRLVADGWLELQLADSESAVRLLAASVRLRAHWESTLD 948
Query: 704 QMI 706
Q +
Sbjct: 949 QQL 951
>UNIPROTKB|E2RTK2 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 OMA:DSDQVFH
GeneTree:ENSGT00700000104421 EMBL:AAEX03000836
Ensembl:ENSCAFT00000006694 Uniprot:E2RTK2
Length = 1177
Score = 475 (172.3 bits), Expect = 4.0e-65, Sum P(3) = 4.0e-65
Identities = 107/267 (40%), Positives = 156/267 (58%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRK 250
G +LVFL G+AEI +L+ A+ + + W+ L LHS+++ DQ KVF P +RK
Sbjct: 383 GDLLVFLSGMAEISSVLE---AAQTYASRTQRWVVLPLHSALSVADQDKVFDVAPPGVRK 439
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXV 310
I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WIS
Sbjct: 440 CILSTNIAETSVTIDGIRFVVDSGKVKEMGYDPQAKLHRLQEFWISQASAEQRKGRAGRT 499
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
PG+C+ LY Y+ PY VPE++R+ L L LQ+K +S+G + F +EPP
Sbjct: 500 GPGVCFRLYAESDYDAFA-PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPA 556
Query: 371 AITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFL 430
++ TAI L + GA++ E LTP+G LA+LPVDV+IGKM++ G +F P+L+I+A L
Sbjct: 557 SLETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAAL 616
Query: 431 SYKSPFIYPKDEKQNVERAKLALLTDK 457
S +SPF A+ L +D+
Sbjct: 617 SVQSPFTRSAQSNPECAAARRPLESDQ 643
Score = 276 (102.2 bits), Expect = 1.0e-41, Sum P(3) = 1.0e-41
Identities = 72/200 (36%), Positives = 113/200 (56%)
Query: 330 PYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE 389
PY VPE++R+ L L LQ+K +S+G + F +EPP ++ TAI L + GA++ E
Sbjct: 518 PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPASLETAILYLQDQGALDSSE 575
Query: 390 ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
LTP+G LA+LPVDV+IGKM++ G +F P+L+I+A LS +SPF + + N E
Sbjct: 576 ALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQSPFT--RSAQSNPE-- 631
Query: 450 KLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVM 509
A LE SD Q D L + W ++ +R ++ ++++C + +
Sbjct: 632 -CAAARRPLE--SD------QGDPFTLFNVFNAWVQVKSER-SRNSRKWCRHRGIEEHRL 681
Query: 510 YMIRDMRIQFGTLLADIGLI 529
Y + ++R QF LL D GL+
Sbjct: 682 YEMANLRRQFKELLEDHGLL 701
Score = 194 (73.4 bits), Expect = 4.0e-65, Sum P(3) = 4.0e-65
Identities = 56/139 (40%), Positives = 74/139 (53%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q + +L +IVDEVHER L DFLL VL+ LL K+ P LKVILMSAT++ +L
Sbjct: 268 IQREPSLPQYQVLIVDEVHERHLHNDFLLGVLRRLLPKR-----PDLKVILMSATINISL 322
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLA-LDSAAAIRY-EASSKSGPVNNR 123
FS YFG PV+ GR P+T + E + + LD +R EA P R
Sbjct: 323 FSSYFGTAPVVQVPGRLFPITVVYQPQEAEPVASKSEKLDPGPFLRVLEAIDNKYPPEER 382
Query: 124 RGKKNLVLSGWGDDSLLSE 142
G + LSG + S + E
Sbjct: 383 -GDLLVFLSGMAEISSVLE 400
Score = 110 (43.8 bits), Expect = 4.0e-65, Sum P(3) = 4.0e-65
Identities = 46/183 (25%), Positives = 81/183 (44%)
Query: 542 KDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSN--LRKSSNS 599
+ LD + S ++ + +++K +L GLYP +A + + S+ S
Sbjct: 774 RHSLDQLQAATSSAQDLTRDQMALLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQSKQ 833
Query: 600 AAKAHP--VWYDGRREVHIHPS----SINSQ----LKSFEHPFLVFLEKVETNKVFLRDT 649
HP ++ + +H S SQ S +H L F+ +ETNK +L +
Sbjct: 834 GTVLHPTCIFANSPEVLHAQEQEARGSEGSQDDKDKMSSKHQLLTFVSLLETNKPYLVNC 893
Query: 650 TIVSPF-SILLFGGSINVQHQTGQVTIDGWLKVT-APAQTAV--LFKELRLTLH--SILR 703
+ S+LLF S++ ++ DGWL++ A +++AV L +RL H S L
Sbjct: 894 VRIPALQSLLLFSRSLDTNGDCSRLVADGWLELQLADSESAVRLLAASVRLRAHWESTLD 953
Query: 704 QMI 706
Q +
Sbjct: 954 QQL 956
>UNIPROTKB|E1BJ90 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:DAAA02047415 IPI:IPI00713665 UniGene:Bt.42016
Ensembl:ENSBTAT00000008999 NextBio:20867826 Uniprot:E1BJ90
Length = 1146
Score = 475 (172.3 bits), Expect = 1.3e-64, Sum P(4) = 1.3e-64
Identities = 116/301 (38%), Positives = 169/301 (56%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRK 250
G +LVFL G+AEI +L+ A + + W+ L LHS+++ DQ KVF P +RK
Sbjct: 379 GDLLVFLSGMAEISAVLEPAQA---YASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRK 435
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXV 310
I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WIS
Sbjct: 436 CILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 495
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
PG+C+ LY Y+ PY VPE++R+ L L LQ+K +S+G + F +EPP
Sbjct: 496 GPGVCFRLYAESDYDAFA-PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPT 552
Query: 371 AITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFL 430
++ TAI L + GA++ E LTP+G LA+LPVDV+IGKM++ G +F P+L+I+A L
Sbjct: 553 SLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAAL 612
Query: 431 SYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKR 490
S ++PF + + N E A LE SD Q D L+ + W ++ +R
Sbjct: 613 SVQTPFT--RSAQSNPE---CAATRRPLE--SD------QGDPFTLLNVFNTWVQVKSER 659
Query: 491 G 491
G
Sbjct: 660 G 660
Score = 279 (103.3 bits), Expect = 8.0e-41, Sum P(4) = 8.0e-41
Identities = 72/200 (36%), Positives = 114/200 (57%)
Query: 330 PYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE 389
PY VPE++R+ L L LQ+K +S+G + F +EPP ++ TAI L + GA++ E
Sbjct: 514 PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPPTSLETAILYLRDQGALDSSE 571
Query: 390 ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
LTP+G LA+LPVDV+IGKM++ G +F P+L+I+A LS ++PF + + N E
Sbjct: 572 ALTPIGSLLAQLPVDVVIGKMLILGSMFHLAEPVLTIAAALSVQTPFT--RSAQSNPE-- 627
Query: 450 KLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVM 509
A LE SD Q D L+ + W ++ +RG + ++++C + +
Sbjct: 628 -CAATRRPLE--SD------QGDPFTLLNVFNTWVQVKSERG-RNSRKWCRHRGIEEHRL 677
Query: 510 YMIRDMRIQFGTLLADIGLI 529
Y + ++R QF LL D GL+
Sbjct: 678 YEMANLRRQFKELLEDHGLL 697
Score = 189 (71.6 bits), Expect = 1.3e-64, Sum P(4) = 1.3e-64
Identities = 54/139 (38%), Positives = 76/139 (54%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q + +L +IVDEVHER L DFLL VL+ LL ++ P LKV+LMSAT++ +L
Sbjct: 264 MQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQR-----PDLKVVLMSATINISL 318
Query: 66 FSRYFGDCPVITAEGRTHPVTT-YFLEDVYESINYRLALDSAAAIRY-EASSKSGPVNNR 123
FS YFG+ PV+ GR P+T Y ++ + + LD +R EA P R
Sbjct: 319 FSSYFGNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLEAIDNKYPPEER 378
Query: 124 RGKKNLVLSGWGDDSLLSE 142
G + LSG + S + E
Sbjct: 379 -GDLLVFLSGMAEISAVLE 396
Score = 102 (41.0 bits), Expect = 1.3e-64, Sum P(4) = 1.3e-64
Identities = 40/176 (22%), Positives = 75/176 (42%)
Query: 540 KKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSN--LRKSS 597
K + +L+ + S + + +++K +L GLYP +A + + S+ +
Sbjct: 774 KLRHNLEQLHAAASSAQALTRDQMALLKLVLGRGLYPQLAVPDPFNSSRKDSDQIFHTQT 833
Query: 598 NSAAKAHP--VWYDGRREVHIHPSSINSQ--------LKSFEHPFLVFLEKVETNKVFLR 647
HP V+ + +H + S +H + F+ +ETNK +L
Sbjct: 834 KQGVVLHPTCVFTNSPEVLHAQEQAARGSDGSRDDRDKMSSKHQLVTFVSLLETNKPYLV 893
Query: 648 DTTIVSPF-SILLFGGSINVQHQTGQVTIDGWLKVT-APAQTAV--LFKELRLTLH 699
+ + S+LLF S++ ++ DGWL++ A ++AV L LRL H
Sbjct: 894 NCVRIPALQSLLLFSRSLDTNGDCSRLVADGWLELQLADTESAVRLLAASLRLRAH 949
Score = 44 (20.5 bits), Expect = 1.3e-64, Sum P(4) = 1.3e-64
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 528 LINLPNKNQTG-GKKK------DDLDSWFSDESQ 554
L L +++ G G+K+ DD D W SDE +
Sbjct: 721 LYELKRRHEEGVGRKRKVLRVQDDQDGWSSDEDR 754
>UNIPROTKB|Q14147 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0005622 "intracellular"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0008270
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:D50924 EMBL:AC008754 EMBL:AK297692
IPI:IPI00382739 RefSeq:NP_055496.2 UniGene:Hs.151706
ProteinModelPortal:Q14147 SMR:Q14147 IntAct:Q14147
PhosphoSite:Q14147 DMDM:311033371 PaxDb:Q14147 PRIDE:Q14147
DNASU:9704 Ensembl:ENST00000328771 GeneID:9704 KEGG:hsa:9704
UCSC:uc010xyn.2 CTD:9704 GeneCards:GC19P047853 HGNC:HGNC:16719
HPA:HPA042159 HPA:HPA043558 neXtProt:NX_Q14147 PharmGKB:PA27221
HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B PhylomeDB:Q14147
ChiTaRS:DHX34 GenomeRNAi:9704 NextBio:36469 Bgee:Q14147
CleanEx:HS_DHX34 Genevestigator:Q14147 GermOnline:ENSG00000134815
Uniprot:Q14147
Length = 1143
Score = 482 (174.7 bits), Expect = 4.3e-64, Sum P(3) = 4.3e-64
Identities = 107/267 (40%), Positives = 157/267 (58%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRK 250
G +LVFL G+AEI +L+ A+ + + W+ L LHS+++ DQ KVF P +RK
Sbjct: 379 GDLLVFLSGMAEISAVLE---AAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRK 435
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXV 310
I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WIS
Sbjct: 436 CILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 495
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
PG+C+ LY Y+ PY VPE++R+ L L LQ+K +S+G + F +EPP
Sbjct: 496 GPGVCFRLYAESDYDAFA-PYPVPEIRRVALDSLVLQMKSMSVGDPRTF--PFIEPPPPA 552
Query: 371 AITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFL 430
++ TAI L + GA++ E LTP+G LA+LPVDV+IGKM++ G +F + P+L+I+A L
Sbjct: 553 SLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAAL 612
Query: 431 SYKSPFIYPKDEKQNVERAKLALLTDK 457
S +SPF A+ L +D+
Sbjct: 613 SVQSPFTRSAQSSPECAAARRPLESDQ 639
Score = 281 (104.0 bits), Expect = 3.0e-40, Sum P(3) = 3.0e-40
Identities = 70/209 (33%), Positives = 113/209 (54%)
Query: 330 PYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE 389
PY VPE++R+ L L LQ+K +S+G + F +EPP ++ TAI L + GA++ E
Sbjct: 514 PYPVPEIRRVALDSLVLQMKSMSVGDPRTF--PFIEPPPPASLETAILYLRDQGALDSSE 571
Query: 390 ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
LTP+G LA+LPVDV+IGKM++ G +F + P+L+I+A LS +SPF A
Sbjct: 572 ALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAALSVQSPFTRSAQSSPECAAA 631
Query: 450 KLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVM 509
+ L +D Q D L + W ++ +R ++ ++++C + + +
Sbjct: 632 RRPLESD-------------QGDPFTLFNVFNAWVQVKSER-SRNSRKWCRRRGIEEHRL 677
Query: 510 YMIRDMRIQFGTLLADIGLINLPNKNQTG 538
Y + ++R QF LL D GL+ Q G
Sbjct: 678 YEMANLRRQFKELLEDHGLLAGAQAAQVG 706
Score = 178 (67.7 bits), Expect = 4.3e-64, Sum P(3) = 4.3e-64
Identities = 52/138 (37%), Positives = 72/138 (52%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q + +L +IVDEVHER L DFLL VL+ LL + P LKVILMSAT++ +L
Sbjct: 264 IQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR-----PDLKVILMSATINISL 318
Query: 66 FSRYFGDCPVITAEGRTHPVTT-YFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
FS YF + PV+ GR P+T Y ++ + + LD +R S R
Sbjct: 319 FSSYFSNAPVVQVPGRLFPITVVYQPQEAEPTTSKSEKLDPRPFLRVLESIDHKYPPEER 378
Query: 125 GKKNLVLSGWGDDSLLSE 142
G + LSG + S + E
Sbjct: 379 GDLLVFLSGMAEISAVLE 396
Score = 106 (42.4 bits), Expect = 4.3e-64, Sum P(3) = 4.3e-64
Identities = 43/174 (24%), Positives = 77/174 (44%)
Query: 540 KKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSN--LRKSS 597
K + DL + S ++ +++K +L GLYP +A + + S+ +
Sbjct: 774 KLRHDLAQLQAAASSAQDLSREQLALLKLVLGRGLYPQLAVPDAFNSSRKDSDQIFHTQA 833
Query: 598 NSAAKAHPVW-YDGRREVHIHPSSINSQ----------LKSFEHPFLVFLEKVETNKVFL 646
A HP + G EV +H + + S +H L F+ +ETNK +L
Sbjct: 834 KQGAVLHPTCVFAGSPEV-LHAQELEASNCDGSRDDKDKMSSKHQLLSFVSLLETNKPYL 892
Query: 647 RDTTIVSPF-SILLFGGSINVQHQTGQVTIDGWLKVT-APAQTAV--LFKELRL 696
+ + S+LLF S++ ++ DGWL++ A +++A+ L LRL
Sbjct: 893 VNCVRIPALQSLLLFSRSLDTNGDCSRLVADGWLELQLADSESAIRLLAASLRL 946
>UNIPROTKB|F1RLY9 [details] [associations]
symbol:DHX34 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 InterPro:IPR015880
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00355 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 CTD:9704 OMA:DSDQVFH GeneTree:ENSGT00700000104421
EMBL:FP102420 RefSeq:XP_003127294.1 Ensembl:ENSSSCT00000003454
GeneID:100515780 KEGG:ssc:100515780 Uniprot:F1RLY9
Length = 1146
Score = 470 (170.5 bits), Expect = 8.1e-64, Sum P(3) = 8.1e-64
Identities = 109/266 (40%), Positives = 157/266 (59%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRK 250
G +LVFL G+AEI +L+ A R G W+ L LHS+++ Q KVF P +RK
Sbjct: 379 GDLLVFLSGLAEIGAVLEAAQAHARRSGR---WVVLPLHSTLSVAAQDKVFDVAPPGVRK 435
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXV 310
I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WIS
Sbjct: 436 CILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 495
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
PG+C+ LY Y+ PY VPE++R+ L L LQ+K +S+G + F +EPP
Sbjct: 496 GPGVCFRLYAESDYDAFA-PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFIEPPPAA 552
Query: 371 AITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFL 430
++ TAI L + GA++G E LTP+G LA+LPVD++IGKM++ G + P+L+I+A L
Sbjct: 553 SLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPVLTIAAAL 612
Query: 431 SYKSPFIYPKDEKQNVERAKLALLTD 456
S +SPF + + N + A AL +D
Sbjct: 613 SVQSPFT--RSTRSNPKCAWRALESD 636
Score = 227 (85.0 bits), Expect = 1.3e-35, Sum P(3) = 1.3e-35
Identities = 56/166 (33%), Positives = 91/166 (54%)
Query: 364 LEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPI 423
+EPP ++ TAI L + GA++G E LTP+G LA+LPVD++IGKM++ G + P+
Sbjct: 546 IEPPPAASLETAILYLRDQGALDGSEALTPIGSLLAQLPVDIVIGKMLVLGSVLHLAEPV 605
Query: 424 LSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKW 483
L+I+A LS +SPF + + N + A AL +D D L + W
Sbjct: 606 LTIAAALSVQSPFT--RSTRSNPKCAWRALESD-------------HGDPFTLFNVFNNW 650
Query: 484 QKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
++ R TK+ +++C + + +Y + ++R QF LL D GL+
Sbjct: 651 VQVKSDRSTKS-RRWCRREGIEEHRLYEMANLRRQFKELLEDHGLL 695
Score = 192 (72.6 bits), Expect = 8.1e-64, Sum P(3) = 8.1e-64
Identities = 58/132 (43%), Positives = 72/132 (54%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++Q + L +IVDEVHER L DFLL VL+ LL ++ P LKVILMSATV+++
Sbjct: 263 HVQREPTLPQYRVLIVDEVHERHLHNDFLLGVLQRLLPRR-----PDLKVILMSATVNTS 317
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLA-LDSAAAIRY-EA-SSKSGPVN 121
LFS YFG PV+ GR P+T + E L LD IR EA SK P
Sbjct: 318 LFSAYFGQAPVVQVPGRLFPITVVYQPQEAEPTASTLEKLDPRPFIRVLEAIDSKYPP-- 375
Query: 122 NRRGKKNLVLSG 133
RG + LSG
Sbjct: 376 EERGDLLVFLSG 387
Score = 105 (42.0 bits), Expect = 8.1e-64, Sum P(3) = 8.1e-64
Identities = 44/173 (25%), Positives = 71/173 (41%)
Query: 540 KKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSN--LRKSS 597
K + DL+ S + +++K +L GLYP A + + S+ +
Sbjct: 771 KLRHDLEQLQEAASSAQVRTRDQMTLLKLVLARGLYPQFAIPDPFNSSRKDSDQIFHTQA 830
Query: 598 NSAAKAHPVWYDGRREVHIHP----------SSINSQLKSFEHPFLVFLEKVETNKVFLR 647
A HP +HP S N S +H L F+ +ET+K +L
Sbjct: 831 KQGAVLHPTCVFANSPEVLHPQEPEATEGKGSQDNRDPMSSKHQLLAFVSLLETSKPYLV 890
Query: 648 DTTIVSPF-SILLFGGSINVQHQTGQVTIDGWLKVT-APAQTAV--LFKELRL 696
+ V S+LLF S++ ++ DGWL++ A ++AV L LRL
Sbjct: 891 NCVRVPALQSLLLFSRSLDTNGDCSRLVADGWLELQLADGESAVRLLAATLRL 943
>ZFIN|ZDB-GENE-061207-30 [details] [associations]
symbol:dhx34 "DEAH (Asp-Glu-Ala-His) box polypeptide
34" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR015880
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-061207-30 GO:GO:0005524
GO:GO:0000184 GO:GO:0008270 GO:GO:0003676 GO:GO:0005622
GO:GO:0009790 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
CTD:9704 HOGENOM:HOG000232193 OMA:DSDQVFH OrthoDB:EOG4GB75B
GeneTree:ENSGT00700000104421 HOVERGEN:HBG051355 EMBL:BX908775
IPI:IPI00503372 RefSeq:NP_001121805.1 UniGene:Dr.50626
Ensembl:ENSDART00000086943 GeneID:555838 KEGG:dre:555838
InParanoid:A2BIE5 NextBio:20881188 Uniprot:A2BIE5
Length = 1150
Score = 463 (168.0 bits), Expect = 5.5e-63, Sum P(3) = 5.5e-63
Identities = 109/302 (36%), Positives = 164/302 (54%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRK 250
G +L+FL GVAEI + + A + + W+ L LHS+++ Q KVF P +RK
Sbjct: 379 GDLLLFLSGVAEISTIQE---ACQTYATHTQRWIVLPLHSTLSLAQQDKVFDIAPPGVRK 435
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXV 310
II+TNIAETS+TID V +V D G+ KE ++ + K+ + E WIS
Sbjct: 436 CIISTNIAETSVTIDGVRFVVDSGKVKEMSFDPKAKMQRLQEFWISRASSEQRKGRAGRT 495
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
PG+CY LY+ Y+ PY VPE+ R+ L L LQ+K + LG + F ++PP
Sbjct: 496 GPGVCYRLYSESDYDAFA-PYPVPEIHRVALDSLILQMKSMGLGDPRTFTF--IDPPPAS 552
Query: 371 AITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFL 430
+I TA++ L E GA++ ELT +G LA+LPVDV+IGKM++ G +F + P+L+++A L
Sbjct: 553 SIQTAVTYLREQGALDEHGELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAAL 612
Query: 431 SYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKR 490
S +SPF+ + A+ L +S D LM + W ++ R
Sbjct: 613 SVQSPFLRSAQHNPDCSTARQPL-------------NSNHGDPFTLMNTFNAWVQVKADR 659
Query: 491 GT 492
G+
Sbjct: 660 GS 661
Score = 286 (105.7 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 81/275 (29%), Positives = 135/275 (49%)
Query: 330 PYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE 389
PY VPE+ R+ L L LQ+K + LG + F ++PP +I TA++ L E GA++
Sbjct: 514 PYPVPEIHRVALDSLILQMKSMGLGDPRTFTF--IDPPPASSIQTAVTYLREQGALDEHG 571
Query: 390 ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
ELT +G LA+LPVDV+IGKM++ G +F + P+L+++A LS +SPF+ + A
Sbjct: 572 ELTSIGRLLAQLPVDVVIGKMLVLGSVFNLVEPVLTVAAALSVQSPFLRSAQHNPDCSTA 631
Query: 450 KLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVM 509
+ L +S D LM + W ++ RG+ ++++C + L +
Sbjct: 632 RQPL-------------NSNHGDPFTLMNTFNAWVQVKADRGS-GSRKWCRRRGLEEQRL 677
Query: 510 YMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAI 569
Y + ++R QF LL GL+ T + + F++ ++ + +H
Sbjct: 678 YEMVNLRRQFKELLRSHGLLEDDTGRATEPQDRARRRERFTERQKLHQLKRDHE------ 731
Query: 570 LCAGLYPNVAATEQGVAGAALS--NLRKSSNSAAK 602
L V E+G+ G A S + +SS S K
Sbjct: 732 LQENTKRKVLRLEEGLEGDASSGSDAEESSTSRKK 766
Score = 174 (66.3 bits), Expect = 5.5e-63, Sum P(3) = 5.5e-63
Identities = 50/138 (36%), Positives = 68/138 (49%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q D +L +IVDEVHER L DFLL VL+ LL + P L+++LMSAT++ L
Sbjct: 264 IQQDASLGQYQVLIVDEVHERHLHCDFLLGVLRSLLSLR-----PDLRLVLMSATINIKL 318
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLE-DVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
FS YF D PV+ GR P+ + E ++ LD +R R
Sbjct: 319 FSSYFNDAPVLQVPGRLFPIQVIYQPIPPEEQVSRSEKLDPRPYLRVLQGIDQRYPQEER 378
Query: 125 GKKNLVLSGWGDDSLLSE 142
G L LSG + S + E
Sbjct: 379 GDLLLFLSGVAEISTIQE 396
Score = 124 (48.7 bits), Expect = 5.5e-63, Sum P(3) = 5.5e-63
Identities = 36/133 (27%), Positives = 63/133 (47%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSN--LRKSSNSAAKAHP--VWYDGRREVHIHPS 619
+++K +LC GLYP +A ++ A S+ + HP V+ +H+ P
Sbjct: 807 ALLKLLLCRGLYPQLAIPDEHNATRKDSDQVFHTRNKQGVVIHPTSVFASDPEVLHV-PE 865
Query: 620 SINSQL-KSFEHPFLVFLEKVETNKVFLRDTTIVSPF-SILLFGGSINVQHQTGQVTIDG 677
S+ +S H L F+ +ETNK +L + V ++LL S+N ++ +DG
Sbjct: 866 HETSEFGQSNRHQLLAFVTLLETNKPYLSNCVRVPALQALLLVANSVNSNADCTRLVVDG 925
Query: 678 WLKVTAPAQTAVL 690
WL+++ A L
Sbjct: 926 WLELSLTDGDAAL 938
>UNIPROTKB|G4MZR9 [details] [associations]
symbol:MGG_07059 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR015940 SMART:SM00165 Gene3D:3.10.110.10
InterPro:IPR016135 SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:CM001232 SUPFAM:SSF46934 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 RefSeq:XP_003715240.1
ProteinModelPortal:G4MZR9 EnsemblFungi:MGG_07059T0 GeneID:2682944
KEGG:mgr:MGG_07059 Uniprot:G4MZR9
Length = 1404
Score = 512 (185.3 bits), Expect = 1.1e-61, Sum P(2) = 1.1e-61
Identities = 122/364 (33%), Positives = 196/364 (53%)
Query: 173 IDYDLLEDLVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLAL 228
I+Y+LL + +D G IL+FLPGVAEI+ R R + +L L
Sbjct: 865 INYNLLVETTEAIDNELSLAQKSGGILIFLPGVAEIN----RACGMLR--SLNCLHVLPL 918
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
H+S+ + +Q+KVF+ PP RKV++ATN+AETSITIDD++ V D G+ KE Y++ +
Sbjct: 919 HASLETKEQRKVFVPPPSGKRKVVVATNVAETSITIDDIIVVVDTGKVKETSYDAANNMR 978
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
+ E + S V+ G CY LYTR + E M PEM+R+PL +LCL +
Sbjct: 979 RLEETFASLAACKQRRGRAGRVQAGECYKLYTR-KLESQMAERPEPEMRRVPLEQLCLSV 1037
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
+ + + ++ FL++A PP+ A+ AI++L +G ++G EELT LG LA +P D+ G
Sbjct: 1038 RAMGIADVRGFLARAPTPPEAAAVEGAITMLRRMGCLDG-EELTALGRQLAAIPADLRCG 1096
Query: 409 KMMLFGGIFGCLSPILSISAFLSY-KSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDS 467
K+M++G +FGCL +S++A LS + F+ P D++ A+ + D
Sbjct: 1097 KLMVYGAVFGCLEDCVSVAALLSSGRGVFVSPPDKRDQAREARARFA---------AGDG 1147
Query: 468 STQSDHLVLMVAYKKWQKILLKRGTKA--AQQFCSKYFLSSSVMYMIRDMRIQFGTLLAD 525
+D + A++ W ++ + + FC FLS + + R Q+ T L +
Sbjct: 1148 DLLTD----LRAFQAWDAMMRDPSVQQRHVRSFCDDNFLSYLTLSDVASARTQYFTSLVE 1203
Query: 526 IGLI 529
+GL+
Sbjct: 1204 LGLV 1207
Score = 195 (73.7 bits), Expect = 4.3e-25, Sum P(2) = 4.3e-25
Identities = 63/261 (24%), Positives = 122/261 (46%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKA--AQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
D L + A++ W ++ + + FC FLS + + R Q+ T L ++GL+
Sbjct: 1148 DLLTDLRAFQAWDAMMRDPSVQQRHVRSFCDDNFLSYLTLSDVASARTQYFTSLVELGLV 1207
Query: 530 NLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ-GVAGA 588
P G + S + E + Y +++A+ + P +A + A
Sbjct: 1208 R-PG--DAGYSNRGPPPS--TSEGGASSKY-----LLRALTASAFAPQIARIQYPDKKFA 1257
Query: 589 ALSNLRKSSNSAAKAHPVWYDGRREVHIHPSS--INSQLKSFEHPFLVFLEKVETNKVFL 646
A + + AK + V +HPSS +SQ S FL + + T+KVF+
Sbjct: 1258 ASMSGAVEIDPEAKTIRYYNQENGRVFVHPSSTLFDSQGFSGNAAFLSYFSIISTSKVFV 1317
Query: 647 RDTTIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMI 706
RD T + +++LLF G+I + + +DGWL++ A+ VL LR + ++ +
Sbjct: 1318 RDLTPFNAYTLLLFAGAIELDTLGRGLVVDGWLRLRGWARIGVLVSRLRGMVDDVIALKV 1377
Query: 707 RNPQNSTIANNEVVKSMIQLL 727
+P + +A+N++++++I+L+
Sbjct: 1378 DDP-SLDLADNDIIRAVIKLI 1397
Score = 184 (69.8 bits), Expect = 1.1e-61, Sum P(2) = 1.1e-61
Identities = 47/116 (40%), Positives = 70/116 (60%)
Query: 11 NLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYF 70
+L V+HV++DEVHERSL DFLL +++D+L+++ D LK++LMSAT+DS F+ YF
Sbjct: 755 SLADVSHVVIDEVHERSLDTDFLLSIIRDVLKQR--RD---LKLVLMSATLDSATFASYF 809
Query: 71 GDCPV----ITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNN 122
+ + GRT PVT Y+L+DV R+ A IR +A + + N
Sbjct: 810 VQDGIRVGQVEIAGRTFPVTDYYLDDVI-----RMTQFGTANIRADADPVAKAIQN 860
Score = 41 (19.5 bits), Expect = 1.2e-46, Sum P(2) = 1.2e-46
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 90 LEDVYESINYRLALDSAAAIRYEAS--SKSGPV 120
++++ INY L +++ AI E S KSG +
Sbjct: 858 IQNLGTRINYNLLVETTEAIDNELSLAQKSGGI 890
>SGD|S000004411 [details] [associations]
symbol:YLR419W "Putative helicase with limited sequence
similarity to human Rb protein" species:4932 "Saccharomyces
cerevisiae" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR006575
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 Pfam:PF05773 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00591 SMART:SM00847
SGD:S000004411 GO:GO:0005739 GO:GO:0005524 GO:GO:0003676
EMBL:BK006945 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
Gene3D:3.10.110.10 InterPro:IPR016135 SUPFAM:SSF54495
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:U20162
RefSeq:NP_013525.3 GeneID:851140 KEGG:sce:YLR421C KO:K06691
HOGENOM:HOG000167651 OMA:GWARIGV OrthoDB:EOG4Z65WS
RefSeq:NP_013523.3 GeneID:851137 KEGG:sce:YLR419W PIR:S59384
ProteinModelPortal:Q06698 SMR:Q06698 IntAct:Q06698
MINT:MINT-2492948 STRING:Q06698 PaxDb:Q06698 PeptideAtlas:Q06698
PRIDE:Q06698 EnsemblFungi:YLR419W CYGD:YLR419w
GeneTree:ENSGT00680000101018 NextBio:967890 Genevestigator:Q06698
GermOnline:YLR419W Uniprot:Q06698
Length = 1435
Score = 409 (149.0 bits), Expect = 1.9e-60, Sum P(3) = 1.9e-60
Identities = 118/381 (30%), Positives = 198/381 (51%)
Query: 162 RQNLKRLNEDVIDYDLLEDLVCHVDETC----GEGAILVFLPGVAEIHILLDRLAASYRF 217
R + K I+YDLL +V +V + G+I+VFLPGV EI+ + LA
Sbjct: 830 RADSKFFTSGQINYDLLCQVVEYVHKRLKAANDNGSIIVFLPGVGEINKCCNLLANKSN- 888
Query: 218 GGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRH 276
+D++ L LHS++ DQK+VF + K RKV+++TNIAETSITIDD V D GR
Sbjct: 889 ---EADFMVLPLHSALTPEDQKRVFKKYHGK-RKVVVSTNIAETSITIDDCVATIDTGRA 944
Query: 277 KENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEM 336
K YN + + ++E +IS V+ G+ Y L++++ YE M +PE+
Sbjct: 945 KSMFYNPKDNTTKLIESFISKAEVKQRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEI 1004
Query: 337 QRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAI-EGDEELTPLG 395
+R+PL L L +K + + +K FLS AL+ P A+ A +L +G + E D+ LT LG
Sbjct: 1005 KRIPLESLYLSVKAMGIKDVKAFLSTALDAPPLPALQKAERILTTIGLVDESDKSLTQLG 1064
Query: 396 HHLAKLPV-DVLIGKMMLFGGIFGCLS-PILSISAFLSYKSPFIYPKDEKQNVERAKLAL 453
++ +PV D GK++++G +FGC +L +S PFI + ++ +++ L
Sbjct: 1065 QFISLMPVMDSKHGKLLIYGILFGCTDISVLLVSILGIGVLPFIGGFENREKIKK----L 1120
Query: 454 LTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIR 513
L K E ++ D ++ + + KI + + +++ LS + + I+
Sbjct: 1121 LC-KYE---------SRGDLFAVLEIVRDYFKI---KDSSIKRKYLRDNLLSYNKINEIK 1167
Query: 514 DMRIQFGTLLADIGLINLPNK 534
Q+ ++L D+G + + K
Sbjct: 1168 SSTAQYYSILKDVGFLPMDYK 1188
Score = 189 (71.6 bits), Expect = 1.9e-60, Sum P(3) = 1.9e-60
Identities = 40/110 (36%), Positives = 67/110 (60%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + + T V++DEVHERS+ D ++ ++K+LL H +K++LMSATV+ +L
Sbjct: 714 LQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLL-----HRVRGMKIVLMSATVNVDL 768
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASS 115
F ++F EGRT P+T YFLED+ +++++ + A + Y+ S
Sbjct: 769 FKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKA--LSYDDDS 816
Score = 153 (58.9 bits), Expect = 1.9e-60, Sum P(3) = 1.9e-60
Identities = 38/115 (33%), Positives = 63/115 (54%)
Query: 618 PSSINSQLKSF-EHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQ-----HQTG 671
P S S++ + ++PF++F TNK++LRD T + S+LLFGG+I+ H G
Sbjct: 1311 PISRQSKIPTVVKYPFVLFTTSQVTNKLYLRDLTPTTTLSLLLFGGAISYDIGGTIHSPG 1370
Query: 672 QVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP---QNSTIANNEVVKSM 723
+ +D WL + + VL KELR L +R+ + +P + S I N+ K++
Sbjct: 1371 -IVVDNWLPIRTWCKNGVLIKELRTQLDEAIRKKLESPDYAKKSQIDNSGADKTL 1424
Score = 64 (27.6 bits), Expect = 3.8e-51, Sum P(3) = 3.8e-51
Identities = 41/204 (20%), Positives = 78/204 (38%)
Query: 504 LSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHS 563
LS + + I+ Q+ ++L D+G LP + G SD N +
Sbjct: 1158 LSYNKINEIKSSTAQYYSILKDVGF--LPMDYKVGS---------ISD----LNRNERNF 1202
Query: 564 SIVKAILCAGLYPNVAATE-QGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSIN 622
I++AIL YP++A + V + S+ + AK W I
Sbjct: 1203 DILRAILTGAFYPHIARVQLPDVKYLSTSSGAVEKDPEAKMIKYW--------IRSEEYQ 1254
Query: 623 SQLKSFEHPFLVFLEKVETNKVFLRDT-TIVSPFSILLFGGSINVQHQTGQVTIDGWLKV 681
+L+ ++ +KV+ + L T + P S+L S+N++ +DG +
Sbjct: 1255 DKLEEYKTKISQETQKVDLEDLPLPATRAFIHPSSVLFSTNSVNLEDAKLLSEVDGPISR 1314
Query: 682 TAPAQTAVLFKELRLTLHSILRQM 705
+ T V + + T + ++
Sbjct: 1315 QSKIPTVVKYPFVLFTTSQVTNKL 1338
>UNIPROTKB|I3LRK0 [details] [associations]
symbol:I3LRK0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:FP102731 EMBL:CU694750
Ensembl:ENSSSCT00000027140 Uniprot:I3LRK0
Length = 524
Score = 578 (208.5 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 116/251 (46%), Positives = 171/251 (68%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA--LHSSVASVDQKKVFLRPPEKIR 249
GAILVFLPG+AEI +L ++L ++ F S+ + LHSS++S +Q+ VF++PP +
Sbjct: 42 GAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVVHPLHSSLSSEEQQAVFVKPPVGVT 101
Query: 250 KVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXX 309
K+II+TNIAETSITIDDVVYV D G+ KE RY++ K + S+ + ++S
Sbjct: 102 KIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGMESLEDTFVSQANALQRKGRAGR 161
Query: 310 VKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLL---SLGRIKIFLSKALEP 366
V G+C+ L+T H + + Q+PE+QR+PL +LCL+IK+L S ++ S+ +EP
Sbjct: 162 VTSGVCFHLFTSHHFNHQLLKQQLPEIQRVPLEQLCLRIKILEMFSTHNLQSVFSRLIEP 221
Query: 367 PKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSI 426
P +++ + L ++GA+ DE+LTPLG+HLA LPVDV IGK+MLFG IF CL P L+I
Sbjct: 222 PHPDSLRASKIRLRDLGALTPDEKLTPLGYHLASLPVDVRIGKLMLFGSIFRCLDPALTI 281
Query: 427 SAFLSYKSPFI 437
+A L++KSPF+
Sbjct: 282 AASLAFKSPFV 292
Score = 55 (24.4 bits), Expect = 4.8e-60, Sum P(2) = 4.8e-60
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 679 LKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
L++TA A+ L KELR L +L+ I+NP
Sbjct: 473 LRLTAVAE---LVKELRCELDQLLQDKIKNP 500
>CGD|CAL0005664 [details] [associations]
symbol:orf19.6818 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 417 (151.9 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 93/281 (33%), Positives = 154/281 (54%)
Query: 173 IDYDLLEDLVCHVD-----ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA 227
++Y+L+ + +D E +G+IL+FLPGV EI + + S + L
Sbjct: 797 LNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINKS----SDNKFMALP 852
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
LHS + S +QK +F P+ RKV+++TNIAETSITI D V V D G+ K ++ +
Sbjct: 853 LHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNT 912
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
+ ++E W S V G CY LYT+ +E M+ +PE++R L L L
Sbjct: 913 TKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKRTRLENLYLV 971
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
+K + + + FLS L+ P + ++ A L+E+GA++ + LT LG++++ LP D
Sbjct: 972 VKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQ-ENSLTKLGNYISYLPTDPQS 1030
Query: 408 GKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
K+++ G IFGCL L+++A S SPFI +++ +++
Sbjct: 1031 AKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQ 1071
Score = 176 (67.0 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 44/124 (35%), Positives = 70/124 (56%)
Query: 6 LQGDKN---LTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVD 62
LQ K L + ++++DEVHERS+ DFLLI+LK +++ PKLK+IL+SAT+
Sbjct: 681 LQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSM-----PKLKIILLSATIS 735
Query: 63 SNLFSRYFGDCPV--ITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASS---KS 117
+ F +F + P+ + EGRT+P+ ++L+ + Y+ I A S KS
Sbjct: 736 VDTFINFF-EKPLTPLHIEGRTYPIQDFYLDSILAESEYKFQNSDGEFITPSADSHFYKS 794
Query: 118 GPVN 121
G +N
Sbjct: 795 GNLN 798
Score = 123 (48.4 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 632 FLVFLEKVETNKVFLRDTTIVSPFSILLFGG--SINVQHQTGQ----VTIDGWLKVTAPA 685
F+ + T K+++RD T S F+ LLFGG S ++ GQ + ID WL +
Sbjct: 1269 FVAYRSSHHTTKLYVRDLTPTSTFATLLFGGDFSYDLNITLGQTSPGIVIDNWLPIRTWC 1328
Query: 686 QTAVLFKELRLTLHSILRQMIRNPQN 711
+ VL K LR + S++ + + NP++
Sbjct: 1329 KNGVLIKHLRRLIDSVIDEKLSNPES 1354
Score = 53 (23.7 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 456 DKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDM 515
DKL+ + + Q D + + AY + KR F ++ +LS + + I
Sbjct: 1067 DKLKQIQKKFGNG-QGDFISMANAYNAYMSNKSKR-------FLTENYLSYTTIKDITST 1118
Query: 516 RIQFGTLLADIGLIN 530
R Q+ +LL ++G +N
Sbjct: 1119 RSQYLSLLVELGFVN 1133
Score = 52 (23.4 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSS-NSAAKAHPVWY--DGR-- 611
N A + +++ I+ YP VA + S+ + A+ W DG
Sbjct: 1141 NKNAENWPLIRGIIAGAFYPQVARIQYPDPKYFKSSSGSIEIDPDARQIKFWIKSDGELP 1200
Query: 612 -REVHIHPSSI--NSQLKSF--EHPFLVFLEKVETN 642
V IHPSS+ N F + + FL KV T+
Sbjct: 1201 AARVFIHPSSVLFNDNNSDFILDENYKDFLSKVSTD 1236
Score = 49 (22.3 bits), Expect = 3.4e-05, Sum P(4) = 3.4e-05
Identities = 21/88 (23%), Positives = 38/88 (43%)
Query: 200 GVAEIHILLDRLAASYRFGGPSSDWLLA------LHSSVASVDQ-KKVFLRPPEKIRKVI 252
G E HI + S RF S +WLL L S D+ KV L+ + +
Sbjct: 299 GFRESHIK-ESFNYSSRFS-ESLEWLLFHIPEDDLPQSFVKTDKDSKVQLKISQNLEMEY 356
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENR 280
+ +A + D+++ V++ + E++
Sbjct: 357 LMKRMANSGFDQDEILEVYNANNNDEHK 384
Score = 44 (20.5 bits), Expect = 5.3e-46, Sum P(5) = 5.3e-46
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 24 HERSL--LGDFLLIVLKDLLEKQSAHDTPKLKVILMS-----ATVDSNLFSRYFGDCPVI 76
H +S+ + D + ++K+ +K+ D K +I S A +S + + G +I
Sbjct: 535 HNKSVTFISDKDIELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLI 594
Query: 77 TAE---GRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
T E G++ V + ++D+Y ++ + R A S + ++ R
Sbjct: 595 TGETGSGKSTQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKER 645
>UNIPROTKB|Q5ADM3 [details] [associations]
symbol:CaO19.14110 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006575 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
Pfam:PF05773 PROSITE:PS00690 PROSITE:PS50908 PROSITE:PS51194
SMART:SM00490 SMART:SM00591 SMART:SM00847 CGD:CAL0005664
GO:GO:0005524 GO:GO:0003676 Gene3D:3.10.110.10 InterPro:IPR016135
SUPFAM:SSF54495 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
EMBL:AACQ01000029 EMBL:AACQ01000028 RefSeq:XP_719795.1
RefSeq:XP_719912.1 ProteinModelPortal:Q5ADM3 GeneID:3638543
GeneID:3638643 KEGG:cal:CaO19.14110 KEGG:cal:CaO19.6818
Uniprot:Q5ADM3
Length = 1370
Score = 417 (151.9 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 93/281 (33%), Positives = 154/281 (54%)
Query: 173 IDYDLLEDLVCHVD-----ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA 227
++Y+L+ + +D E +G+IL+FLPGV EI + + S + L
Sbjct: 797 LNYELIAHVTRFIDKRLTQEAKQDGSILIFLPGVLEISSTIKEINKS----SDNKFMALP 852
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
LHS + S +QK +F P+ RKV+++TNIAETSITI D V V D G+ K ++ +
Sbjct: 853 LHSGLTSAEQKSIFKTAPKGKRKVVVSTNIAETSITIPDCVAVIDTGKSKNLFFDHKLNT 912
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
+ ++E W S V G CY LYT+ +E M+ +PE++R L L L
Sbjct: 913 TKLIESWCSQAEVRQRRGRAGRVTAGTCYHLYTKETFEA-MQKQPIPEIKRTRLENLYLV 971
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
+K + + + FLS L+ P + ++ A L+E+GA++ + LT LG++++ LP D
Sbjct: 972 VKSMGISNVNEFLSSGLDAPDKSSLDKANQFLHEIGALQ-ENSLTKLGNYISYLPTDPQS 1030
Query: 408 GKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
K+++ G IFGCL L+++A S SPFI +++ +++
Sbjct: 1031 AKLLILGCIFGCLDICLTLAAISSTGSPFINSYEQRDKLKQ 1071
Score = 176 (67.0 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 44/124 (35%), Positives = 70/124 (56%)
Query: 6 LQGDKN---LTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVD 62
LQ K L + ++++DEVHERS+ DFLLI+LK +++ PKLK+IL+SAT+
Sbjct: 681 LQSSKKNGVLKNIGYILIDEVHERSVDADFLLILLKKMIKSM-----PKLKIILLSATIS 735
Query: 63 SNLFSRYFGDCPV--ITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASS---KS 117
+ F +F + P+ + EGRT+P+ ++L+ + Y+ I A S KS
Sbjct: 736 VDTFINFF-EKPLTPLHIEGRTYPIQDFYLDSILAESEYKFQNSDGEFITPSADSHFYKS 794
Query: 118 GPVN 121
G +N
Sbjct: 795 GNLN 798
Score = 123 (48.4 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 28/86 (32%), Positives = 46/86 (53%)
Query: 632 FLVFLEKVETNKVFLRDTTIVSPFSILLFGG--SINVQHQTGQ----VTIDGWLKVTAPA 685
F+ + T K+++RD T S F+ LLFGG S ++ GQ + ID WL +
Sbjct: 1269 FVAYRSSHHTTKLYVRDLTPTSTFATLLFGGDFSYDLNITLGQTSPGIVIDNWLPIRTWC 1328
Query: 686 QTAVLFKELRLTLHSILRQMIRNPQN 711
+ VL K LR + S++ + + NP++
Sbjct: 1329 KNGVLIKHLRRLIDSVIDEKLSNPES 1354
Score = 53 (23.7 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 19/75 (25%), Positives = 35/75 (46%)
Query: 456 DKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDM 515
DKL+ + + Q D + + AY + KR F ++ +LS + + I
Sbjct: 1067 DKLKQIQKKFGNG-QGDFISMANAYNAYMSNKSKR-------FLTENYLSYTTIKDITST 1118
Query: 516 RIQFGTLLADIGLIN 530
R Q+ +LL ++G +N
Sbjct: 1119 RSQYLSLLVELGFVN 1133
Score = 52 (23.4 bits), Expect = 1.4e-59, Sum P(5) = 1.4e-59
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 557 NMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSS-NSAAKAHPVWY--DGR-- 611
N A + +++ I+ YP VA + S+ + A+ W DG
Sbjct: 1141 NKNAENWPLIRGIIAGAFYPQVARIQYPDPKYFKSSSGSIEIDPDARQIKFWIKSDGELP 1200
Query: 612 -REVHIHPSSI--NSQLKSF--EHPFLVFLEKVETN 642
V IHPSS+ N F + + FL KV T+
Sbjct: 1201 AARVFIHPSSVLFNDNNSDFILDENYKDFLSKVSTD 1236
Score = 49 (22.3 bits), Expect = 3.4e-05, Sum P(4) = 3.4e-05
Identities = 21/88 (23%), Positives = 38/88 (43%)
Query: 200 GVAEIHILLDRLAASYRFGGPSSDWLLA------LHSSVASVDQ-KKVFLRPPEKIRKVI 252
G E HI + S RF S +WLL L S D+ KV L+ + +
Sbjct: 299 GFRESHIK-ESFNYSSRFS-ESLEWLLFHIPEDDLPQSFVKTDKDSKVQLKISQNLEMEY 356
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENR 280
+ +A + D+++ V++ + E++
Sbjct: 357 LMKRMANSGFDQDEILEVYNANNNDEHK 384
Score = 44 (20.5 bits), Expect = 5.3e-46, Sum P(5) = 5.3e-46
Identities = 23/111 (20%), Positives = 49/111 (44%)
Query: 24 HERSL--LGDFLLIVLKDLLEKQSAHDTPKLKVILMS-----ATVDSNLFSRYFGDCPVI 76
H +S+ + D + ++K+ +K+ D K +I S A +S + + G +I
Sbjct: 535 HNKSVTFISDKDIELVKESYKKRKHSDEFKEMLIQRSKLPAFAKQESLMTAINSGQVTLI 594
Query: 77 TAE---GRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
T E G++ V + ++D+Y ++ + R A S + ++ R
Sbjct: 595 TGETGSGKSTQVVQFIMDDLYSKGDFTTKIICTQPRRLSAVSLADRISKER 645
>WB|WBGene00004355 [details] [associations]
symbol:rha-1 species:6239 "Caenorhabditis elegans"
[GO:0003725 "double-stranded RNA binding" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0045814 "negative regulation of gene expression,
epigenetic" evidence=IMP] InterPro:IPR001159 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00035 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50137 PROSITE:PS51194 SMART:SM00358 SMART:SM00490
SMART:SM00847 InterPro:IPR014720 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0051301 GO:GO:0007067 GO:GO:0006355
GO:GO:0003677 Gene3D:3.30.160.20 GO:GO:0006351 GO:GO:0007281
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000247063 GeneTree:ENSGT00550000074257 KO:K13184
EMBL:Z50071 PIR:T24664 RefSeq:NP_495890.2 ProteinModelPortal:Q22307
SMR:Q22307 STRING:Q22307 PaxDb:Q22307 EnsemblMetazoa:T07D4.3.1
EnsemblMetazoa:T07D4.3.2 GeneID:174417 KEGG:cel:CELE_T07D4.3
UCSC:T07D4.3 CTD:174417 WormBase:T07D4.3 InParanoid:Q22307
OMA:DDWIRLQ NextBio:883938 GO:GO:0045814 Uniprot:Q22307
Length = 1301
Score = 537 (194.1 bits), Expect = 2.5e-58, Sum P(2) = 2.5e-58
Identities = 149/474 (31%), Positives = 248/474 (52%)
Query: 52 LKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVT----TYFLEDVY-ESINYRLALDSA 106
L+V+LMSAT+D++LF+ +F P + G T +T T+ ++ Y E I + L
Sbjct: 530 LRVVLMSATIDTDLFTNFFSSIPDV---GPTPVITMHGRTFPVQSFYLEDILHNLQ-HMP 585
Query: 107 AAIRYEASSKSGPV--NNRRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQN 164
+ K GP ++ G + + G + ++L++ IN E +
Sbjct: 586 EEPDQKKRKKGGPPPPDDDEGDEEVDDKG-RNMNILTDPSIN------------ESLKTA 632
Query: 165 LKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW 224
+ R++E I + ++E ++ + +GA+LVFLPG AEI L +RL FG +
Sbjct: 633 MSRISEKDIPFGVIEAILNDIASRGVDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYE 692
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
+L LHS + S +Q+KVF P K RK+I++TNIAETSITIDDVVYV D + KE Y S
Sbjct: 693 ILPLHSQLTSQEQRKVFNHYPGK-RKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSN 751
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+ W S V+ G + L ++ R+E L + EM R+PL ++
Sbjct: 752 NNMVHFATVWASKTNVIQRRGRAGRVRAGYAFHLCSKMRFEAL-DDHGTAEMLRIPLHQI 810
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
L IKLL LG + FL KAL+PP + + + +VL +GA++ + ELT LG LA++P++
Sbjct: 811 ALTIKLLRLGSVGEFLGKALQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIE 870
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDS 464
+I K+++ G G S + +++ +S+ +PF+ P+ EK + +L G
Sbjct: 871 PVIAKVLILGTALGAGSVMCDVASAMSFPTPFV-PR-EKHH----------SRLSGTQRK 918
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQ 518
+ SDH+ ++ + +++ + + A ++FC +Y LS+ V+ M R Q
Sbjct: 919 FAGNKFSDHVAIVSVIQGYREAVQMGASAAEREFCERYSLSNPVLKMTDGARRQ 972
Score = 438 (159.2 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 111/325 (34%), Positives = 176/325 (54%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ L G++HVI+DE+HER + DF+LIVL++++ + D L+V+LMSAT+D++LF+
Sbjct: 492 ENGLRGISHVIIDEIHERDVDTDFVLIVLREMIS--TYRD---LRVVLMSATIDTDLFTN 546
Query: 69 YF------GDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNN 122
+F G PVIT GRT PV +++LED+ ++ + + + P ++
Sbjct: 547 FFSSIPDVGPTPVITMHGRTFPVQSFYLEDILHNLQH---MPEEPDQKKRKKGGPPPPDD 603
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLV 182
G + + G + ++L++ IN E + + R++E I + ++E ++
Sbjct: 604 DEGDEEVDDKG-RNMNILTDPSIN------------ESLKTAMSRISEKDIPFGVIEAIL 650
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFL 242
+ +GA+LVFLPG AEI L +RL FG + +L LHS + S +Q+KVF
Sbjct: 651 NDIASRGVDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFN 710
Query: 243 RPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
P K RK+I++TNIAETSITIDDVVYV D + KE Y S + W S
Sbjct: 711 HYPGK-RKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQ 769
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKL 327
V+ G + L ++ R+E L
Sbjct: 770 RRGRAGRVRAGYAFHLCSKMRFEAL 794
Score = 103 (41.3 bits), Expect = 2.5e-58, Sum P(2) = 2.5e-58
Identities = 41/149 (27%), Positives = 68/149 (45%)
Query: 564 SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINS 623
++++++L LYPNVA V + + +SS K Y + P + N
Sbjct: 1003 NLMRSLLVMALYPNVAYY---VGKRKVLTIEQSSALINK-----YS-----MLVPMN-NR 1048
Query: 624 QLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQ-TGQVTIDGWLKVT 682
Q F P LVF EKV T + + +++S +L+FG S V+ G V ID + +
Sbjct: 1049 QEMDFPSPLLVFTEKVRTRCISCKQMSVISAIQLLVFG-SRKVECVGEGLVRIDETITIR 1107
Query: 683 APAQTAVLFKELRLTLHSILRQMIRNPQN 711
TA LR + ++L + NP++
Sbjct: 1108 MNVSTAAALIGLRPCIEALLVKSCENPES 1136
>FB|FBgn0030833 [details] [associations]
symbol:CG8915 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01424
Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014298 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00680000101018 FlyBase:FBgn0030833 EMBL:BT133099
RefSeq:NP_573208.1 SMR:Q9VX63 IntAct:Q9VX63 MINT:MINT-762262
EnsemblMetazoa:FBtr0074447 GeneID:32715 KEGG:dme:Dmel_CG8915
UCSC:CG8915-RA InParanoid:Q9VX63 OMA:WISQADA GenomeRNAi:32715
NextBio:779983 Uniprot:Q9VX63
Length = 976
Score = 420 (152.9 bits), Expect = 6.3e-56, Sum P(3) = 6.3e-56
Identities = 114/341 (33%), Positives = 181/341 (53%)
Query: 173 IDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSD-WLLALHSS 231
ID DL+ L+ + GA++V+LPG +++ LL RL +S P ++ LHS
Sbjct: 442 IDNDLIVSLLELLLRQGDAGAVIVYLPGYSDMTSLLARLESSL----PREQITIILLHSQ 497
Query: 232 VASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMV 291
V + +Q+KVF P K+I++TNI +TSITI D++YV D G K Y+S S +
Sbjct: 498 VDNSEQRKVFRTYPGVRLKIILSTNIGQTSITIPDLLYVIDTGLAKMKTYDSTIDASQLT 557
Query: 292 EDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLL 351
WIS V G CY LY R + M Y +PE+ R L E+CL KL
Sbjct: 558 LTWISQADAKQRAGRAGRVCHGNCYRLYDNDRMAR-MNLYTIPEIMRRTLDEICLLTKLA 616
Query: 352 SLGR-IKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKM 410
+ + I+ FL+ AL+ P ++A+ + S L +G ++ +E+TPLGH +A+LP+ V IGK
Sbjct: 617 APDKKIENFLALALDTPPKDAVMQSCSRLKLLGVLDERDEVTPLGHIVAELPLGVQIGKC 676
Query: 411 MLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQ 470
+++ CL ++ I+A+ S + PF+ N+ER K + ++ + + D
Sbjct: 677 LVYSIYLRCLDSMIIIAAYHSVRDPFVL------NIERGKKS--GQQISRVLFAGDG--M 726
Query: 471 SDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYM 511
SD L ++ Y+++ LKR K FC + F+ + M M
Sbjct: 727 SDSLAVIKLYEEFTN--LKR--KDIGDFCERNFICRNAMEM 763
Score = 174 (66.3 bits), Expect = 6.3e-56, Sum P(3) = 6.3e-56
Identities = 39/84 (46%), Positives = 50/84 (59%)
Query: 16 THVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPV 75
TH+I+DE HER L DFLL+ K LE Q P L+++LMSAT+D S YFG V
Sbjct: 328 THLIIDEAHERDLDTDFLLLATK--LELQK---NPHLRLVLMSATMDLEALSNYFGGGTV 382
Query: 76 ITAEGRTHPVTTYFLEDVYESINY 99
+ EGR+ V+ Y LED+ Y
Sbjct: 383 MDVEGRSFEVSIYHLEDILSKTGY 406
Score = 103 (41.3 bits), Expect = 6.3e-56, Sum P(3) = 6.3e-56
Identities = 42/192 (21%), Positives = 89/192 (46%)
Query: 549 FSDES-QMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNS-AAKAHPV 606
FS+ S ++ + + N +++++ L AGLYP +A + R++ N A+ P+
Sbjct: 781 FSEASARLASSFNNDTNMIRLALTAGLYPKLAYMD-----------RENKNQLVAEGDPL 829
Query: 607 WYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVET-NKVF-LRDTTIVSPFSILLFGGSI 664
R + L S +++F+EK T +++ L TT+VS + L GG
Sbjct: 830 VQVSRSSC-LRGKKKQKDLAS---EWILFVEKTRTADQISSLEHTTLVSGLMVALAGGKR 885
Query: 665 NVQHQTGQ---VTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEVVK 721
+ G + +D W+++ PA+ + ++R+ +++ + S + ++ +
Sbjct: 886 FITEAHGSEMLLCLDSWIRLKCPAEFGLQLHKVRMLTDREFAKLVATRKLS-LMSDFIGP 944
Query: 722 SMIQLLLEEDKP 733
++ LLE D P
Sbjct: 945 ETVRRLLEADVP 956
>UNIPROTKB|D3ZZG1 [details] [associations]
symbol:Dhx35 "Protein Dhx35" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1311165 GO:GO:0005524 GO:GO:0003676 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00951610
Ensembl:ENSRNOT00000068625 OrthoDB:EOG4V9TQ5 ArrayExpress:D3ZZG1
Uniprot:D3ZZG1
Length = 703
Score = 426 (155.0 bits), Expect = 5.2e-50, Sum P(4) = 5.2e-50
Identities = 101/287 (35%), Positives = 154/287 (53%)
Query: 168 LNEDVIDY-DLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSS 222
L V DY D V + +T G+G IL FL G E+ +L+++ A R G
Sbjct: 250 LQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKH 309
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+L +++ + S +Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYN 369
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ + +V +S + G CY LYT +E+L + VPEMQR L
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQS-TVPEMQRSNLA 428
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
+ LQ+K L + + F + PP +++ A+ +LY +G ++ D LT PLG +A+
Sbjct: 429 PVVLQLKALGIDSVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
P++ + KM+L G FGC ILSI+A + ++ F++P ++K R
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATR 533
Score = 117 (46.2 bits), Expect = 5.2e-50, Sum P(4) = 5.2e-50
Identities = 32/93 (34%), Positives = 52/93 (55%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + V++DE HER+L D + +LK + +K+ D L++I+ SAT+D+ F
Sbjct: 164 DPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRG--D---LRLIVASATLDAEKFRD 218
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 219 FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 71 (30.1 bits), Expect = 5.2e-50, Sum P(4) = 5.2e-50
Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 613 EVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
E+HIHP+S+ L + + P ++++ E ++T+K ++RD T +
Sbjct: 635 ELHIHPASV---LYAEKPPRWVIYNEVIQTSKYYMRDVTAI 672
Score = 44 (20.5 bits), Expect = 5.2e-50, Sum P(4) = 5.2e-50
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+ DHL ++ Y+ + K + Q+C ++FL+ + +R Q LL
Sbjct: 542 EGDHLTMLNVYEAFIK------HNKSSQWCQEHFLNYKGLVRAATVRDQLKKLL 589
Score = 40 (19.1 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 313 GICYSLYTRHRYEKLMRPYQVPEM 336
G+ + R + +KL+ +QVP+M
Sbjct: 574 GLVRAATVRDQLKKLLVKFQVPKM 597
>UNIPROTKB|J3KR71 [details] [associations]
symbol:DHX34 "Probable ATP-dependent RNA helicase DHX34"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AC008754 HGNC:HGNC:16719
ChiTaRS:DHX34 ProteinModelPortal:J3KR71 Ensembl:ENST00000466298
Uniprot:J3KR71
Length = 576
Score = 403 (146.9 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 85/197 (43%), Positives = 121/197 (61%)
Query: 240 VFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXX 299
VF P +RK I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WIS
Sbjct: 340 VFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQAS 399
Query: 300 XXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIF 359
PG+C+ LY Y+ PY VPE++R+ L L LQ+K +S+G + F
Sbjct: 400 AEQRKGRAGRTGPGVCFRLYAESDYDAFA-PYPVPEIRRVALDSLVLQMKSMSVGDPRTF 458
Query: 360 LSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGC 419
+EPP ++ TAI L + GA++ E LTP+G LA+LPVDV+IGKM++ G +F
Sbjct: 459 --PFIEPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSL 516
Query: 420 LSPILSISAFLSYKSPF 436
+ P+L+I+A LS +SPF
Sbjct: 517 VEPVLTIAAALSVQSPF 533
Score = 172 (65.6 bits), Expect = 1.1e-49, Sum P(2) = 1.1e-49
Identities = 40/83 (48%), Positives = 53/83 (63%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q + +L +IVDEVHER L DFLL VL+ LL + P LKVILMSAT++ +L
Sbjct: 264 IQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR-----PDLKVILMSATINISL 318
Query: 66 FSRYFGDCPVITAEGRTHPVTTY 88
FS YF + PV+ GR P+T +
Sbjct: 319 FSSYFSNAPVVQVPGRLFPITVF 341
>UNIPROTKB|E1BDN4 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP CTD:60625
EMBL:DAAA02036576 EMBL:DAAA02036577 EMBL:DAAA02036578
IPI:IPI00707123 RefSeq:NP_001179272.1 UniGene:Bt.52291
Ensembl:ENSBTAT00000005281 GeneID:513148 KEGG:bta:513148
NextBio:20870723 Uniprot:E1BDN4
Length = 703
Score = 412 (150.1 bits), Expect = 1.7e-48, Sum P(4) = 1.7e-48
Identities = 99/288 (34%), Positives = 152/288 (52%)
Query: 168 LNEDVIDY-DLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW-- 224
L V DY + V + +T G+G IL FL G E+ ++ L R G +
Sbjct: 250 LQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGQTGMKRH 309
Query: 225 --LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+L +++ + S +Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN
Sbjct: 310 LRILPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ + +V +S + G CY LYT +++L + VPEMQR L
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDQLPQS-TVPEMQRSNLA 428
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
+ LQ+K L + + F + PP +++ A+ +LY +G ++ D LT PLG +A+
Sbjct: 429 PVILQLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
P++ + KM+L G FGC ILSI+A + ++ F+ P ++K RA
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVVPSNQKSQAIRA 534
Score = 116 (45.9 bits), Expect = 1.7e-48, Sum P(4) = 1.7e-48
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +++DE HER+L D + +LK + +K+ D L++I+ SAT+D+ F
Sbjct: 164 DPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRG--D---LRLIVASATLDAEKFRD 218
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 219 FFNHNDTSDPTRDTCVILTVEGRTFPVDIFYLQ 251
Score = 71 (30.1 bits), Expect = 1.7e-48, Sum P(4) = 1.7e-48
Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 613 EVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
E+HIHP+S+ L + + P ++++ E ++T+K ++RD T +
Sbjct: 635 ELHIHPASV---LYAEKPPRWVIYNEVIQTSKYYMRDVTAI 672
Score = 49 (22.3 bits), Expect = 1.7e-48, Sum P(4) = 1.7e-48
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
+ DHL ++ Y+ + +K + Q+C ++FL+ + +R Q LL
Sbjct: 542 EGDHLTMLNVYEAF----IKHNKNS--QWCQEHFLNYKGLVRAATVREQLKKLLVKF--- 592
Query: 530 NLPNKNQTG 538
+P K+ G
Sbjct: 593 QVPKKSSEG 601
>UNIPROTKB|F1SDW0 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:CU442751
Ensembl:ENSSSCT00000008044 Uniprot:F1SDW0
Length = 719
Score = 410 (149.4 bits), Expect = 3.7e-48, Sum P(4) = 3.7e-48
Identities = 99/287 (34%), Positives = 153/287 (53%)
Query: 168 LNEDVIDY-DLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSS 222
L V DY + V + +T G+G IL FL G E+ +L+++ A R G
Sbjct: 250 LQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRH 309
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+L +++ + S +Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ + +V +S + G CY LYT +++L + VPEMQR L
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRAGRSRSGKCYRLYTEDAFDQLPQS-TVPEMQRSNLA 428
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
+ LQ+K L + + F + PP +++ A+ +LY +G ++ D LT PLG +A+
Sbjct: 429 PVILQLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
P++ + KM+L G FGC ILSI+A + ++ F+ P ++K R
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPSNQKSQAIR 533
Score = 117 (46.2 bits), Expect = 3.7e-48, Sum P(4) = 3.7e-48
Identities = 31/93 (33%), Positives = 52/93 (55%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +++DE HER+L D + +LK + +K+ D L++I+ SAT+D+ F
Sbjct: 164 DPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQKKRG--D---LRLIVASATLDAEKFRD 218
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 219 FFNQNDTSDPPRDTCVILTVEGRTFPVDIFYLQ 251
Score = 71 (30.1 bits), Expect = 3.7e-48, Sum P(4) = 3.7e-48
Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 613 EVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
E+HIHP+S+ L + + P ++++ E ++T+K ++RD T +
Sbjct: 635 ELHIHPASV---LYAEKPPRWVIYNEVIQTSKYYMRDVTAI 672
Score = 49 (22.3 bits), Expect = 3.7e-48, Sum P(4) = 3.7e-48
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
+ DHL ++ Y+ + +K + Q+C ++FL+ + +R Q LL
Sbjct: 542 EGDHLTMLNVYEAF----IKHNKNS--QWCQEHFLNYKGLVRAATVREQLKKLLVKF--- 592
Query: 530 NLPNKNQTG 538
+P K+ G
Sbjct: 593 QVPKKSSEG 601
>FB|FBgn0052533 [details] [associations]
symbol:CG32533 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:AE014298 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
OMA:DSDQVFH GeneTree:ENSGT00700000104421 EMBL:AY058623
RefSeq:NP_728244.1 UniGene:Dm.4145 SMR:Q9VWI5
EnsemblMetazoa:FBtr0074786 GeneID:32933 KEGG:dme:Dmel_CG32533
UCSC:CG32533-RA FlyBase:FBgn0052533 InParanoid:Q9VWI5
OrthoDB:EOG4V9S5G GenomeRNAi:32933 NextBio:781096 Uniprot:Q9VWI5
Length = 1139
Score = 414 (150.8 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 111/333 (33%), Positives = 173/333 (51%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDE---TCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSS 222
KR + ID ++ +D+ T G +L+F+ GV EI +++ A + + +
Sbjct: 344 KRSQRNRIDPAPFVQVLSLIDQQYPTSERGDVLIFVSGVNEIESVVE---AVHEYATEQT 400
Query: 223 DWL-LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
WL L LHS A DQ KVF PE +RK I++TNIAETS+T+D V +V D G+ KE +
Sbjct: 401 HWLVLPLHSGQAIADQSKVFDYAPEGMRKCIVSTNIAETSLTVDGVRFVVDSGKVKEMNF 460
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
++ K + E W+S PG+C+ LYT +Y Y PE+ R+PL
Sbjct: 461 DATCKGQRLKEFWVSKSSADQRKGRAGRTGPGVCFRLYTAEQYNAF-EAYPTPEIYRVPL 519
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
+ LQ+ + L ++ F +E P+ E I I L + A+ +E++TPLG LA L
Sbjct: 520 DTMLLQMVSMGLPDVRAF--PFIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANL 577
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGL 461
PV++ IGKM+L G +F + +L+++A LS ++P Q R + + LE
Sbjct: 578 PVELSIGKMLLMGSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQRCVRER-----ESLE-- 630
Query: 462 SDSNDSSTQSDHLVLMVAYKKWQKILLKR-GTK 493
SD D T LV + Y W ++ ++R GT+
Sbjct: 631 SDHGDLFT----LVRL--YNVWVQLKMRRDGTR 657
Score = 187 (70.9 bits), Expect = 1.5e-22, Sum P(3) = 1.5e-22
Identities = 53/183 (28%), Positives = 93/183 (50%)
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
++++S+G + +E P+ E I I L + A+ +E++TPLG LA LPV++ I
Sbjct: 524 LQMVSMGLPDVRAFPFIEAPETERIEQTILALKQHCALSVEEKITPLGRSLANLPVELSI 583
Query: 408 GKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDS 467
GKM+L G +F + +L+++A LS ++P Q R + + LE SD D
Sbjct: 584 GKMLLMGSVFPEVEQLLTLAAMLSVQNPLTNRAHTDQRCVRER-----ESLE--SDHGDL 636
Query: 468 STQSDHLVLMVAYKKWQKILLKR-GTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
T L+ Y W ++ ++R GT+ Q+C + + Y + +R QF +L
Sbjct: 637 FT------LVRLYNVWVQLKMRRDGTR---QWCRRLGIEEQRFYEVTKLRQQFQRILESC 687
Query: 527 GLI 529
G++
Sbjct: 688 GMV 690
Score = 149 (57.5 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 36/82 (43%), Positives = 50/82 (60%)
Query: 11 NLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYF 70
NL +I+DE+HER+L GDFLL V K LL + P+LK+ILMSAT++ LF YF
Sbjct: 253 NLDQYDALILDEIHERNLFGDFLLGVTKCLLRAR-----PQLKLILMSATINVELFHGYF 307
Query: 71 GD--CPVITAEGRTHPVTTYFL 90
G+ ++ GR P+ +L
Sbjct: 308 GEEGARLVQVPGRLFPIKLRYL 329
Score = 64 (27.6 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 17/59 (28%), Positives = 29/59 (49%)
Query: 627 SFEHPFLVFLEKVETNKVFLRDTT-IVSPFSILLFGGSINVQHQTGQVTIDGWLKVTAP 684
S H L + +ET K +L + + + ++LLF +I+ Q+ DGWL + P
Sbjct: 859 SKRHQLLCYQSLLETAKPYLINCIRLPAAQTLLLFSFAIDTNAGITQIACDGWLGLDLP 917
Score = 38 (18.4 bits), Expect = 2.2e-45, Sum P(3) = 2.2e-45
Identities = 8/19 (42%), Positives = 12/19 (63%)
Query: 684 PAQTAVLFKELRLTLHSIL 702
P Q A+L + RL HS++
Sbjct: 765 PRQLALLERSSRLDRHSVV 783
>RGD|1311165 [details] [associations]
symbol:Dhx35 "DEAH (Asp-Glu-Ala-His) box polypeptide 35"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA;ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 RGD:1311165 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104241 KO:K13117
OMA:NIFVVPP CTD:60625 EMBL:CH474005 IPI:IPI00764730
RefSeq:NP_001102071.1 UniGene:Rn.118078 Ensembl:ENSRNOT00000021435
GeneID:362260 KEGG:rno:362260 UCSC:RGD:1311165 NextBio:679233
Uniprot:D4AEG5
Length = 679
Score = 426 (155.0 bits), Expect = 1.1e-47, Sum P(4) = 1.1e-47
Identities = 101/287 (35%), Positives = 154/287 (53%)
Query: 168 LNEDVIDY-DLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSS 222
L V DY D V + +T G+G IL FL G E+ +L+++ A R G
Sbjct: 250 LQSPVPDYIKATVDTVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKKH 309
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+L +++ + S +Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSHSVRKVIVATNVAETSITISGIVYVIDCGFMKLRAYN 369
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ + +V +S + G CY LYT +E+L + VPEMQR L
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRGGRNRSGKCYRLYTEEAFEQLPQS-TVPEMQRSNLA 428
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
+ LQ+K L + + F + PP +++ A+ +LY +G ++ D LT PLG +A+
Sbjct: 429 PVVLQLKALGIDSVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
P++ + KM+L G FGC ILSI+A + ++ F++P ++K R
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNVFVFPSNQKSQATR 533
Score = 117 (46.2 bits), Expect = 1.1e-47, Sum P(4) = 1.1e-47
Identities = 32/93 (34%), Positives = 52/93 (55%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + V++DE HER+L D + +LK + +K+ D L++I+ SAT+D+ F
Sbjct: 164 DPLLTKYSVVMLDEAHERTLYTDIAIGLLKKIQKKRG--D---LRLIVASATLDAEKFRD 218
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 219 FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 45 (20.9 bits), Expect = 1.1e-47, Sum P(4) = 1.1e-47
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 633 LVFLEKVETNKVFLRDTTIV 652
+++ E ++T+K ++RD T +
Sbjct: 629 VIYNEVIQTSKYYMRDVTAI 648
Score = 44 (20.5 bits), Expect = 1.1e-47, Sum P(4) = 1.1e-47
Identities = 13/54 (24%), Positives = 25/54 (46%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+ DHL ++ Y+ + K + Q+C ++FL+ + +R Q LL
Sbjct: 542 EGDHLTMLNVYEAFIK------HNKSSQWCQEHFLNYKGLVRAATVRDQLKKLL 589
>UNIPROTKB|F5GXM6 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K13117 EMBL:AL023803
UniGene:Hs.444520 DNASU:60625 GeneID:60625 KEGG:hsa:60625 CTD:60625
HGNC:HGNC:15861 GenomeRNAi:60625 NextBio:65461 IPI:IPI00513682
RefSeq:NP_001177738.1 ProteinModelPortal:F5GXM6 SMR:F5GXM6
Ensembl:ENST00000373323 UCSC:uc010zwc.2 ArrayExpress:F5GXM6
Bgee:F5GXM6 Uniprot:F5GXM6
Length = 672
Score = 414 (150.8 bits), Expect = 1.3e-47, Sum P(3) = 1.3e-47
Identities = 99/287 (34%), Positives = 154/287 (53%)
Query: 168 LNEDVIDY-DLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSS 222
L V DY + V + +T G+G +L FL G E+ +L+++ A R G
Sbjct: 219 LQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRH 278
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+L +++ + S +Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN
Sbjct: 279 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 338
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ + +V +S + G CY LYT ++KL + VPEMQR L
Sbjct: 339 PRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQS-TVPEMQRSNLA 397
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
+ LQ+K L + + F + PP +++ A+ +LY +G ++ D LT PLG +A+
Sbjct: 398 PVILQLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 455
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
P++ + KM+L G FGC ILSI+A + ++ F+ P ++K + R
Sbjct: 456 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIR 502
Score = 117 (46.2 bits), Expect = 1.3e-47, Sum P(3) = 1.3e-47
Identities = 31/93 (33%), Positives = 53/93 (56%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +++DE HER+L D + +LK + +K+ D L++I+ SAT+D++ F
Sbjct: 133 DPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG--D---LRLIVASATLDADKFRD 187
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 188 FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 220
Score = 71 (30.1 bits), Expect = 1.3e-47, Sum P(3) = 1.3e-47
Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 613 EVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
E+HIHP+S+ L + + P ++++ E ++T+K ++RD T +
Sbjct: 604 ELHIHPASV---LYAEKPPRWVIYNEVIQTSKYYMRDVTAI 641
>TAIR|locus:2033723 [details] [associations]
symbol:ESP3 "ENHANCED SILENCING PHENOTYPE 3" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0008380 "RNA splicing" evidence=NAS]
[GO:0035194 "posttranscriptional gene silencing by RNA"
evidence=IMP] [GO:0016020 "membrane" evidence=IDA] [GO:0006306 "DNA
methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0008380 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 GO:GO:0035194 OMA:GTLHREF EMBL:AY074318 EMBL:AY133872
IPI:IPI00543041 RefSeq:NP_174527.2 UniGene:At.40132
ProteinModelPortal:Q8VY00 IntAct:Q8VY00 PaxDb:Q8VY00 PRIDE:Q8VY00
EnsemblPlants:AT1G32490.1 GeneID:840143 KEGG:ath:AT1G32490
TAIR:At1g32490 InParanoid:Q8VY00 PhylomeDB:Q8VY00
ProtClustDB:CLSN2685836 ArrayExpress:Q8VY00 Genevestigator:Q8VY00
Uniprot:Q8VY00
Length = 1044
Score = 383 (139.9 bits), Expect = 2.2e-47, Sum P(4) = 2.2e-47
Identities = 100/318 (31%), Positives = 157/318 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYR-FGGPSSDWLLA-L 228
D +D ++ L HV E G+ ILVF G EI + L R G + ++ +
Sbjct: 594 DYMDAAIVTILTIHVREPLGD--ILVFFTGQEEIETAEEILKHRIRGLGTKIRELIICPI 651
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q K+F PE RKV++ATNIAETS+TID + YV D G K YN + +
Sbjct: 652 YANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGME 711
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S++ IS PG CY LYT Y + VPE+QR L + L +
Sbjct: 712 SLLITPISKASATQRAGRAGRTSPGKCYRLYTAFNYNNDLEENTVPEVQRTNLASVVLAL 771
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K SLG + ++PP EA+ ++ +L+ +GA+ ELT G +A+ P+D ++
Sbjct: 772 K--SLGIHDLINFDFMDPPPAEALVKSLELLFALGALNKLGELTKAGRRMAEFPLDPMLS 829
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM++ + C I+SI+A LS Y PKD++ + + A++ T +
Sbjct: 830 KMIVVSDKYKCSDEIISIAAMLSIGGSIFYRPKDKQVHADNARMNFHTGNV--------- 880
Query: 468 STQSDHLVLMVAYKKWQK 485
DH+ L+ Y W++
Sbjct: 881 ---GDHIALLKVYSSWKE 895
Score = 145 (56.1 bits), Expect = 2.2e-47, Sum P(4) = 2.2e-47
Identities = 33/80 (41%), Positives = 48/80 (60%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L G+ +L + VIVDE HER+L D L ++KD+ A P LK+++ SAT+D+
Sbjct: 509 LLGEPDLASYSVVIVDEAHERTLSTDILFGLVKDI-----ARFRPDLKLLISSATMDAEK 563
Query: 66 FSRYFGDCPVITAEGRTHPV 85
FS YF P+ + GR +PV
Sbjct: 564 FSDYFDTAPIFSFPGRRYPV 583
Score = 70 (29.7 bits), Expect = 2.2e-47, Sum P(4) = 2.2e-47
Identities = 19/84 (22%), Positives = 38/84 (45%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINL 531
DH+ L+ Y W++ T + Q+C + ++ M RD+R Q LL + +
Sbjct: 882 DHIALLKVYSSWKE------TNFSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDIS 935
Query: 532 PNKNQTGGKKKDDLDSWFSDESQM 555
N N+ +K + +F +++
Sbjct: 936 SNLNELDSVRKSIVAGFFPHTAKL 959
Score = 64 (27.6 bits), Expect = 2.2e-47, Sum P(4) = 2.2e-47
Identities = 20/64 (31%), Positives = 32/64 (50%)
Query: 591 SNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTT 650
+ L+K+ + HP + VHIHP NS L ++V+ E V T+K ++R T
Sbjct: 957 AKLQKNGSYRTVKHP------QTVHIHP---NSGLSQVLPRWVVYHELVLTSKEYMRQVT 1007
Query: 651 IVSP 654
+ P
Sbjct: 1008 ELKP 1011
Score = 37 (18.1 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 629 EHPFLVFLEK--VETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQVTID 676
E P L K V ++K D I+S ++L GGSI + + QV D
Sbjct: 821 EFPLDPMLSKMIVVSDKYKCSDE-IISIAAMLSIGGSIFYRPKDKQVHAD 869
>UNIPROTKB|Q9H5Z1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CH471077 GO:GO:0003676 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K13117 OMA:NIFVVPP
EMBL:AK026412 EMBL:AK025541 EMBL:AL023803 EMBL:BC132669
IPI:IPI00030288 RefSeq:NP_068750.2 UniGene:Hs.444520
ProteinModelPortal:Q9H5Z1 SMR:Q9H5Z1 IntAct:Q9H5Z1
PhosphoSite:Q9H5Z1 DMDM:20137971 PRIDE:Q9H5Z1 DNASU:60625
Ensembl:ENST00000252011 GeneID:60625 KEGG:hsa:60625 UCSC:uc002xjh.3
CTD:60625 GeneCards:GC20P037590 HGNC:HGNC:15861 neXtProt:NX_Q9H5Z1
PharmGKB:PA27222 InParanoid:Q9H5Z1 PhylomeDB:Q9H5Z1
GenomeRNAi:60625 NextBio:65461 ArrayExpress:Q9H5Z1 Bgee:Q9H5Z1
CleanEx:HS_DHX35 Genevestigator:Q9H5Z1 GermOnline:ENSG00000101452
Uniprot:Q9H5Z1
Length = 703
Score = 414 (150.8 bits), Expect = 2.7e-47, Sum P(3) = 2.7e-47
Identities = 99/287 (34%), Positives = 154/287 (53%)
Query: 168 LNEDVIDY-DLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSS 222
L V DY + V + +T G+G +L FL G E+ +L+++ A R G
Sbjct: 250 LQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRH 309
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+L +++ + S +Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ + +V +S + G CY LYT ++KL + VPEMQR L
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQS-TVPEMQRSNLA 428
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
+ LQ+K L + + F + PP +++ A+ +LY +G ++ D LT PLG +A+
Sbjct: 429 PVILQLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
P++ + KM+L G FGC ILSI+A + ++ F+ P ++K + R
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIR 533
Score = 117 (46.2 bits), Expect = 2.7e-47, Sum P(3) = 2.7e-47
Identities = 31/93 (33%), Positives = 53/93 (56%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +++DE HER+L D + +LK + +K+ D L++I+ SAT+D++ F
Sbjct: 164 DPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG--D---LRLIVASATLDADKFRD 218
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 219 FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 71 (30.1 bits), Expect = 2.7e-47, Sum P(3) = 2.7e-47
Identities = 14/41 (34%), Positives = 29/41 (70%)
Query: 613 EVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
E+HIHP+S+ L + + P ++++ E ++T+K ++RD T +
Sbjct: 635 ELHIHPASV---LYAEKPPRWVIYNEVIQTSKYYMRDVTAI 672
>UNIPROTKB|E2RQN1 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 EMBL:AAEX03013926
Ensembl:ENSCAFT00000014378 NextBio:20859776 Uniprot:E2RQN1
Length = 698
Score = 412 (150.1 bits), Expect = 6.5e-47, Sum P(4) = 6.5e-47
Identities = 100/287 (34%), Positives = 153/287 (53%)
Query: 168 LNEDVIDY-DLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSS 222
L V DY + V + +T G+G IL FL G E+ +L+++ A R G
Sbjct: 242 LQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRH 301
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+L +++ + S +Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN
Sbjct: 302 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 361
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ + +V +S + G CY LYT ++KL + VPEMQR L
Sbjct: 362 PRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQ-CTVPEMQRSNLA 420
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
+ LQ+K L + + F + PP +++ A+ +LY +G ++ D LT PLG +A+
Sbjct: 421 PVILQLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEF 478
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
P++ + KM+L G FGC ILSI+A + ++ F+ P ++K R
Sbjct: 479 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIR 525
Score = 114 (45.2 bits), Expect = 6.5e-47, Sum P(4) = 6.5e-47
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +++DE HER+L D + +LK + K+ D L++++ SAT+D+ F
Sbjct: 156 DPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRG--D---LRLLVASATLDAEKFRD 210
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 211 FFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQ 243
Score = 57 (25.1 bits), Expect = 6.5e-47, Sum P(4) = 6.5e-47
Identities = 14/69 (20%), Positives = 35/69 (50%)
Query: 585 VAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPF-LVFLEKVETNK 643
+ +N + ++ A + + + GR E +H ++ +S F +++ E ++T+K
Sbjct: 602 IVSGFFANAARFHSTGAYSRTLAHSGR-EAQVHLFTVVPGTQSRYWGFRVIYNEVIQTSK 660
Query: 644 VFLRDTTIV 652
++RD T +
Sbjct: 661 YYMRDVTAI 669
Score = 49 (22.3 bits), Expect = 6.5e-47, Sum P(4) = 6.5e-47
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
+ DHL ++ Y+ + +K + Q+C ++FL+ + +R Q LL
Sbjct: 534 EGDHLTMLNVYEAF----IKHNKNS--QWCQEHFLNYKGLIRAATVREQLKKLLVKF--- 584
Query: 530 NLPNKNQTG 538
+P K+ G
Sbjct: 585 QVPKKSSEG 593
>UNIPROTKB|Q5SQH5 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:CH471081 GO:GO:0003676 EMBL:BX119957 EMBL:CR753328
EMBL:CR759778 EMBL:AL732442 EMBL:BX908728 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
UniGene:Hs.485060 HGNC:HGNC:2739 EMBL:CR788240 EMBL:AL662798
EMBL:CU013522 IPI:IPI00644906 SMR:Q5SQH5 Ensembl:ENST00000376437
Ensembl:ENST00000414052 Ensembl:ENST00000445379
Ensembl:ENST00000449861 Ensembl:ENST00000451748
Ensembl:ENST00000453879 UCSC:uc003nqy.3 Uniprot:Q5SQH5
Length = 560
Score = 371 (135.7 bits), Expect = 1.5e-46, Sum P(4) = 1.5e-46
Identities = 102/316 (32%), Positives = 157/316 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLA-ASYRFGGPSSDWL-LAL 228
D ++ ++ L HV + G+ ILVFL G EI + L R G + L L +
Sbjct: 109 DYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 166
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q ++F P RKV++ATNIAETS+TI+ ++YV D G K+ YN + +
Sbjct: 167 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 226
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ S V G C+ LYT Y+ + VPE+QR L + L +
Sbjct: 227 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 286
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP E + A+ LY +GA+ ELT G +A+LPVD ++
Sbjct: 287 KSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLS 344
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM+L + C IL+++A LS + Y PKD+ + + A++ L G
Sbjct: 345 KMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF---LPG------- 394
Query: 468 STQSDHLVLMVAYKKW 483
DHLVL+ Y +W
Sbjct: 395 ---GDHLVLLNVYTQW 407
Score = 137 (53.3 bits), Expect = 1.5e-46, Sum P(4) = 1.5e-46
Identities = 31/72 (43%), Positives = 44/72 (61%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
V+VDE HER+L D L ++KD+ A P+LKV++ SAT+D+ FS +F D PV
Sbjct: 36 VMVDEAHERTLHTDILFGLIKDV-----ARFRPELKVLVASATMDTARFSTFFDDAPVFR 90
Query: 78 AEGRTHPVTTYF 89
GR PV ++
Sbjct: 91 IPGRRFPVDIFY 102
Score = 64 (27.6 bits), Expect = 1.5e-46, Sum P(4) = 1.5e-46
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL--ADIGL 528
DHLVL+ Y +W + + + Q+C + F+ M RD+R Q LL ++GL
Sbjct: 396 DHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 448
Score = 47 (21.6 bits), Expect = 1.5e-46, Sum P(4) = 1.5e-46
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
++ V IHP NS L + +L++ E V T K F+R
Sbjct: 484 QQTVFIHP---NSSLFEQQPRWLLYHELVLTTKEFMR 517
>FB|FBgn0086444 [details] [associations]
symbol:l(2)37Cb "lethal (2) 37Cb" species:7227 "Drosophila
melanogaster" [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC;ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12813 GO:GO:0016779 GeneTree:ENSGT00700000104241
OMA:GTLHREF EMBL:AY061330 RefSeq:NP_609946.1 UniGene:Dm.468
SMR:Q9VIZ3 IntAct:Q9VIZ3 MINT:MINT-318410 STRING:Q9VIZ3
EnsemblMetazoa:FBtr0081163 GeneID:35192 KEGG:dme:Dmel_CG10689
UCSC:CG10689-RA FlyBase:FBgn0086444 InParanoid:Q9VIZ3
OrthoDB:EOG459ZWG GenomeRNAi:35192 NextBio:792305 Uniprot:Q9VIZ3
Length = 894
Score = 399 (145.5 bits), Expect = 1.8e-46, Sum P(3) = 1.8e-46
Identities = 107/319 (33%), Positives = 162/319 (50%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSSDWL- 225
D ID + L H + G+ ILVFL G EI +L DR+ R G + +
Sbjct: 443 DYIDACCVSVLQIHATQPLGD--ILVFLTGQDEIETCQEVLHDRVK---RLGSKIRELIV 497
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
+ +++++ S Q K+F P RKVI+ATNIAETS+TID+++YV D G K+N +NS+
Sbjct: 498 IPVYANLPSDMQAKIFEPTPPNARKVILATNIAETSLTIDNIIYVIDPGFAKQNNFNSRT 557
Query: 286 KLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
+ S++ IS PG C+ LYT Y+ + VPE+QR+ L
Sbjct: 558 GMESLMVVPISKASANQRAGRAGRTAPGKCFRLYTAWAYKHELEDNTVPEIQRINLGNAV 617
Query: 346 LQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDV 405
L +K L + + F L+PP E + A+ LY +GA+ ELT LG +A+ PVD
Sbjct: 618 LMLKALGINDLIHF--DFLDPPPHETLVLALEQLYALGALNHHGELTKLGRRMAEFPVDP 675
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDS 464
++GKM+L + C +++I+A LS S Y PKD+ + + A+
Sbjct: 676 MMGKMLLASEKYKCSEEMVTIAAMLSVNSAIFYRPKDKIIHADTAR-------------K 722
Query: 465 NDSSTQSDHLVLMVAYKKW 483
N + DHL L+ Y +W
Sbjct: 723 NFNHMHGDHLSLLQVYNQW 741
Score = 141 (54.7 bits), Expect = 1.8e-46, Sum P(3) = 1.8e-46
Identities = 29/81 (35%), Positives = 49/81 (60%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +I+DE HER+L D L ++KD+ A P+LK+++ SAT+D+ FS
Sbjct: 361 EPDLASYSVMIIDEAHERTLHTDILFGLVKDI-----ARFRPELKLLISSATLDAEKFSA 415
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+F D P+ GR +PV ++
Sbjct: 416 FFDDAPIFRIPGRRYPVDIFY 436
Score = 67 (28.6 bits), Expect = 1.8e-46, Sum P(3) = 1.8e-46
Identities = 28/122 (22%), Positives = 53/122 (43%)
Query: 465 NDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL- 523
N + DHL L+ Y +W + T + Q+C + F+ M RD+R Q L+
Sbjct: 723 NFNHMHGDHLSLLQVYNQWAE------TDYSTQWCYENFIQYRSMKRARDVREQLVGLMQ 776
Query: 524 -ADIGLIN-LPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAAT 581
+I +++ LP +T +K +F +++ H +K ++PN +
Sbjct: 777 RVEIDMVSCLP---ETVNVRKAATAGYFYHVARLSK--GGHYKTIKHNQTVMIHPNSSLF 831
Query: 582 EQ 583
E+
Sbjct: 832 EE 833
>UNIPROTKB|E2RQN7 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AAEX03013926
Ensembl:ENSCAFT00000014371 Uniprot:E2RQN7
Length = 702
Score = 412 (150.1 bits), Expect = 1.9e-46, Sum P(4) = 1.9e-46
Identities = 100/287 (34%), Positives = 153/287 (53%)
Query: 168 LNEDVIDY-DLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSS 222
L V DY + V + +T G+G IL FL G E+ +L+++ A R G
Sbjct: 250 LQSPVPDYIKSTVETVMKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALGRTGMKRH 309
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+L +++ + S +Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ + +V +S + G CY LYT ++KL + VPEMQR L
Sbjct: 370 PRTTIECLVVAPVSQASANQRAGRAGRSRSGKCYRLYTEEAFDKLPQ-CTVPEMQRSNLA 428
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
+ LQ+K L + + F + PP +++ A+ +LY +G ++ D LT PLG +A+
Sbjct: 429 PVILQLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRVAEF 486
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
P++ + KM+L G FGC ILSI+A + ++ F+ P ++K R
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPGNQKSQAIR 533
Score = 114 (45.2 bits), Expect = 1.9e-46, Sum P(4) = 1.9e-46
Identities = 30/93 (32%), Positives = 51/93 (54%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +++DE HER+L D + +LK + K+ D L++++ SAT+D+ F
Sbjct: 164 DPLLTKYSAIMLDEAHERTLYTDIAIGLLKKIQRKRG--D---LRLLVASATLDAEKFRD 218
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 219 FFNQNETSDPTRDTCVILTVEGRTFPVDIFYLQ 251
Score = 53 (23.7 bits), Expect = 1.9e-46, Sum P(4) = 1.9e-46
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 599 SAAKAHPVWYDGRREVHIHPSSINSQ-LKSFEHPFL---VFLEKVETNKVFLRDTTIV 652
+AA+ H G V + P S+ L F FL ++ E ++T+K ++RD T +
Sbjct: 617 NAARFHST---GAYSVILSPHSLYLYYLTLFNRKFLQKVIYNEVIQTSKYYMRDVTAI 671
Score = 49 (22.3 bits), Expect = 1.9e-46, Sum P(4) = 1.9e-46
Identities = 16/69 (23%), Positives = 31/69 (44%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
+ DHL ++ Y+ + +K + Q+C ++FL+ + +R Q LL
Sbjct: 542 EGDHLTMLNVYEAF----IKHNKNS--QWCQEHFLNYKGLIRAATVREQLKKLLVKF--- 592
Query: 530 NLPNKNQTG 538
+P K+ G
Sbjct: 593 QVPKKSSEG 601
>TAIR|locus:2062492 [details] [associations]
symbol:MEE29 "maternal effect embryo arrest 29"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:CP002685 GO:GO:0003676 GO:GO:0009793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 OMA:RIDDHRD IPI:IPI00520097
RefSeq:NP_181077.3 UniGene:At.53041 ProteinModelPortal:F4IJV4
SMR:F4IJV4 PRIDE:F4IJV4 EnsemblPlants:AT2G35340.1 GeneID:818101
KEGG:ath:AT2G35340 Uniprot:F4IJV4
Length = 1044
Score = 386 (140.9 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 94/282 (33%), Positives = 146/282 (51%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYR-FGGPSSDWLLA-L 228
D +D + L HV E G+ +LVFLPG EI + + L R G + ++ +
Sbjct: 594 DYMDAAITTVLTIHVKEPLGD--VLVFLPGQEEIEAVEENLKHKIRGLGTKIRELIICPI 651
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q K+F PE RKV++ATNIAETS+TID + YV D G K YN + +
Sbjct: 652 YANLPSELQAKIFEPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGME 711
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S++ IS PG CY LYT Y + VPE+QR L + L +
Sbjct: 712 SLLVTPISKASATQRTGRAGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSL 771
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F ++PP EA+ ++ +L+ +GA+ ELT G +A+ P+D ++
Sbjct: 772 KSLGIHNLLNF--DFMDPPPSEALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLS 829
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERA 449
KM++ + C I+SI+A LS Y PKD++ + + A
Sbjct: 830 KMIVVSDKYKCSDEIISIAAMLSIGPSIFYRPKDKQVHADNA 871
Score = 140 (54.3 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 32/84 (38%), Positives = 48/84 (57%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L G+ +L + +IVDE HER+L D L ++KD+ A P LK+++ SAT+D+
Sbjct: 509 LLGEPDLGSYSVIIVDEAHERTLRTDILFGLVKDI-----ARARPDLKLLISSATMDAEK 563
Query: 66 FSRYFGDCPVITAEGRTHPVTTYF 89
FS +F P+ GR +PV F
Sbjct: 564 FSDFFDQAPIFRFPGRRYPVDICF 587
Score = 65 (27.9 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 18/84 (21%), Positives = 37/84 (44%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINL 531
DH+ + Y W++ T + Q+C + ++ M RD+R Q LL + +
Sbjct: 882 DHIAFLKIYNSWKE------TNYSTQWCYENYIQVRSMKRARDIRDQLEGLLERVEIDVS 935
Query: 532 PNKNQTGGKKKDDLDSWFSDESQM 555
N N+ +K + +F +++
Sbjct: 936 SNANELDSIRKSIVAGFFPHTAKL 959
Score = 60 (26.2 bits), Expect = 2.8e-46, Sum P(4) = 2.8e-46
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 591 SNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTT 650
+ L+K+ + HP + VHIHP+S SQ+ ++V+ + V T+K ++R T
Sbjct: 957 AKLQKNGSYRTVKHP------QTVHIHPASGLSQVLP---RWVVYHQLVLTSKEYMRQVT 1007
Query: 651 IVSP 654
+ P
Sbjct: 1008 ELKP 1011
>WB|WBGene00021365 [details] [associations]
symbol:smgl-2 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0032940 "secretion by cell" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0002119
GO:GO:0032940 GO:GO:0010171 GO:GO:0040011 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GeneTree:ENSGT00700000104421 EMBL:FO081788 RefSeq:NP_500405.3
ProteinModelPortal:Q9N437 SMR:Q9N437 PaxDb:Q9N437
EnsemblMetazoa:Y37E11AM.1 GeneID:177135 KEGG:cel:CELE_Y37E11AM.1
UCSC:Y37E11AM.1 CTD:177135 WormBase:Y37E11AM.1 InParanoid:Q9N437
OMA:LRADVMC NextBio:895494 Uniprot:Q9N437
Length = 1018
Score = 385 (140.6 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 109/353 (30%), Positives = 181/353 (51%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRK 250
G L+FL GVAEI ++ + L + ++ W+ L LHS+++ +Q KVF + P IRK
Sbjct: 292 GDALIFLNGVAEISMVAEHLK---NYAELTNGWIILMLHSTLSVEEQDKVFDQAPVGIRK 348
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXV 310
I++TN+AETS+TID + +V D G+ ++ + E W+S
Sbjct: 349 CILSTNVAETSVTIDGIRFVIDSGKVNLIKHEPGTGTQKLTEFWVSKASANQRKGRAGRT 408
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
PGICY LY++ ++EK M + V E+ R+ L E+ L++ L+LG + +E P E+
Sbjct: 409 GPGICYRLYSQEQFEK-MDDFTVSEINRVSLQEMALKMISLNLG-LDPRTFPFIEKPSED 466
Query: 371 AITTAISVLYEVGAIEGDE----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSI 426
+ + VL + D LT LG+ ++KLPV+V I KM+++G + L +L++
Sbjct: 467 VLNEGLEVLKFQRVLRSDRGDILTLTALGNMVSKLPVEVPIAKMLVYGCVVDELEVMLTV 526
Query: 427 SAFLSYKSPFIYPK-DEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQK 485
+A LS +SPF E + VER A LT L D L+ +++W
Sbjct: 527 AAGLSVQSPFTNRSYRELEIVERR--ASLTSPL------------GDPFTLISIFREW-- 570
Query: 486 ILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTG 538
+L K A+++ + + +Y I +R Q+ +L D GL+ + +TG
Sbjct: 571 VLQKAFEGTARRWTMENGIDEHRLYEISKLRAQYRQILEDAGLVEKASAAETG 623
Score = 152 (58.6 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 45/145 (31%), Positives = 74/145 (51%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
++ D L +I+DEVHER L D L+ +L+DL K+ LK+ILMSAT++ +L
Sbjct: 175 MEKDSLLEKYNVIILDEVHERHLTSDLLIGLLRDLCTKRD-----DLKLILMSATINLDL 229
Query: 66 FSRYFGDCPVITAEGRTHPVTTYF---LEDVYESINYRLALDSAAAIRY-EASSKSGPVN 121
F YF PV+ GR P+ + + + +S +D ++ E K P +
Sbjct: 230 FKGYFEGAPVVQVPGRLFPIDVRWHPIKQFIDQSDKKTHKIDPEPYLKILELIDKQFP-S 288
Query: 122 NRRGKKNLVLSGWGDDSLLSEEYIN 146
+RG + L+G + S+++E N
Sbjct: 289 TQRGDALIFLNGVAEISMVAEHLKN 313
Score = 71 (30.1 bits), Expect = 5.3e-46, Sum P(3) = 5.3e-46
Identities = 39/151 (25%), Positives = 66/151 (43%)
Query: 563 SSIVKAILCAGLYPNVA----ATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHP 618
+ +V+ I+ AGLYPN + + G ++ R + + HP HP
Sbjct: 714 AEVVRVIIAAGLYPNFSILDPVNKYGYGQEMFTHTRLKPFT--QIHP----NSSIAQYHP 767
Query: 619 SSINSQLKS--FE--H--PFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQTGQ 672
+I+ + S F H PF L +ET K ++ + V LL I ++ Q
Sbjct: 768 ETIDPRQGSDGFSRLHQIPFYGLL--LETTKPYICNVMPVPAVYTLLVAQKIVIEDDWSQ 825
Query: 673 VTIDGWLKVTAPAQT---AVLF--KELRLTL 698
++ID +L++ + T +VL KE+R L
Sbjct: 826 LSIDDFLELRFRSSTDCRSVLLDAKEIRYEL 856
Score = 37 (18.1 bits), Expect = 5.0e-34, Sum P(3) = 5.0e-34
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 107 AAIRYEASSKSGPVNNRRGKKN 128
A R+ + G NRRG+K+
Sbjct: 15 ALFRHFLPDEPGTSGNRRGEKS 36
>UNIPROTKB|G4NI12 [details] [associations]
symbol:MGG_17793 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0043581 "mycelium development"
evidence=IEP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 GO:GO:0043581
EMBL:CM001236 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 RefSeq:XP_003720239.1 EnsemblFungi:MGG_17793T0
GeneID:12987242 KEGG:mgr:MGG_17793 Uniprot:G4NI12
Length = 1430
Score = 388 (141.6 bits), Expect = 5.5e-46, Sum P(3) = 5.5e-46
Identities = 90/288 (31%), Positives = 149/288 (51%)
Query: 173 IDYDLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDR---LAASYR---FGGPSS 222
+ DL+ + H+ + G ILVFLPG+ EI +L DR L ++ F S
Sbjct: 853 VPIDLVAATIAHIASSASPGDILVFLPGIKEIRSVNDVLRDRQGSLGIDFKDINFNDTSK 912
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+ LHS+V++ +Q K+F + P R++I+A+NIAETS+TI DVV+V D G+ ++ +Y+
Sbjct: 913 FRIHFLHSAVSAAEQNKIFQKVPLGCRRIILASNIAETSVTIPDVVHVVDVGKTRDRKYD 972
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+++ M W + + G Y LY+ R + M+ +PEM ++ L
Sbjct: 973 RSTRITGMYTGWQTKSKAMQRQGRAGRTQEGHYYGLYSEQRRQS-MKDDALPEMLKLDLT 1031
Query: 343 ELCLQIKLLSL-GRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
CL +K + FL+ A+ PP + A++ L + A+ +E +T LGH L ++
Sbjct: 1032 NTCLSVKGFGFRDSVADFLAAAISPPPPSVVQDAVNSLKAMDALAENEGITSLGHLLLRI 1091
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
P+ L+GKM+L G F C+ P++ + A S F P +RA
Sbjct: 1092 PLHPLLGKMILLGVFFRCVGPMIVLCALHGGGSLFEVPPGSPSAAKRA 1139
Score = 131 (51.2 bits), Expect = 5.5e-46, Sum P(3) = 5.5e-46
Identities = 32/92 (34%), Positives = 51/92 (55%)
Query: 16 THVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN-LFSRYFGD-- 72
+H+++DEVHERSL D LL+VLK + ++ A K+ILMSA++ + Y D
Sbjct: 708 SHIVIDEVHERSLELDLLLVVLKKAIAERLAKGQSLPKIILMSASISNQEQLQEYLADSL 767
Query: 73 -------------CPVITAEGRTHPVTTYFLE 91
CP+++ GRT PV++ +L+
Sbjct: 768 HDGKARRLPAHQACPILSIPGRTFPVSSIYLD 799
Score = 96 (38.9 bits), Expect = 5.5e-46, Sum P(3) = 5.5e-46
Identities = 39/128 (30%), Positives = 62/128 (48%)
Query: 542 KDDLDSWFSDESQM-FNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSA 600
+D+L+ FS + N+ + + ++KA+L GLYPNVA A S R S +A
Sbjct: 1208 RDELEHRFSSPGGVELNVNSGNEQLLKALLVKGLYPNVAVK------VARSPTRMSLKAA 1261
Query: 601 AKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVET---NKVFLRDTT-IVSPFS 656
A G V + P + N +L ++ V+ E V N +FL + + + SP
Sbjct: 1262 AGGSGHVLLGHASV-VQPIT-NHELFP-KNSLFVYSELVRQDYINLMFLTNVSHLESPLV 1318
Query: 657 ILLFGGSI 664
+ LFGGS+
Sbjct: 1319 LALFGGSL 1326
>UNIPROTKB|Q5JP46 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOVERGEN:HBG039428 UniGene:Hs.485060
HGNC:HGNC:2739 IPI:IPI00292510 SMR:Q5JP46 Ensembl:ENST00000383576
UCSC:uc011ijt.2 Uniprot:Q5JP46
Length = 560
Score = 371 (135.7 bits), Expect = 8.1e-46, Sum P(4) = 8.1e-46
Identities = 102/316 (32%), Positives = 157/316 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLA-ASYRFGGPSSDWL-LAL 228
D ++ ++ L HV + G+ ILVFL G EI + L R G + L L +
Sbjct: 109 DYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 166
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q ++F P RKV++ATNIAETS+TI+ ++YV D G K+ YN + +
Sbjct: 167 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 226
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ S V G C+ LYT Y+ + VPE+QR L + L +
Sbjct: 227 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 286
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP E + A+ LY +GA+ ELT G +A+LPVD ++
Sbjct: 287 KSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLS 344
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM+L + C IL+++A LS + Y PKD+ + + A++ L G
Sbjct: 345 KMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF---LPG------- 394
Query: 468 STQSDHLVLMVAYKKW 483
DHLVL+ Y +W
Sbjct: 395 ---GDHLVLLNVYTQW 407
Score = 130 (50.8 bits), Expect = 8.1e-46, Sum P(4) = 8.1e-46
Identities = 30/72 (41%), Positives = 43/72 (59%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
V+VDE HER+L D L ++KD+ A P+LKV++ SAT+D+ FS +F PV
Sbjct: 36 VMVDEAHERTLHTDILFGLIKDV-----ARFRPELKVLVASATMDTARFSTFFDGAPVFR 90
Query: 78 AEGRTHPVTTYF 89
GR PV ++
Sbjct: 91 IPGRRFPVDIFY 102
Score = 64 (27.6 bits), Expect = 8.1e-46, Sum P(4) = 8.1e-46
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL--ADIGL 528
DHLVL+ Y +W + + + Q+C + F+ M RD+R Q LL ++GL
Sbjct: 396 DHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 448
Score = 47 (21.6 bits), Expect = 8.1e-46, Sum P(4) = 8.1e-46
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
++ V IHP NS L + +L++ E V T K F+R
Sbjct: 484 QQTVFIHP---NSSLFEQQPRWLLYHELVLTTKEFMR 517
>CGD|CAL0004768 [details] [associations]
symbol:PRP22 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0071021
"U2-type post-spliceosomal complex" evidence=IEA] [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0004768 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AACQ01000012 InterPro:IPR022967 SMART:SM00316
KO:K12818 EMBL:AACQ01000011 RefSeq:XP_721941.1 RefSeq:XP_722102.1
ProteinModelPortal:Q5AJY8 STRING:Q5AJY8 GeneID:3636272
GeneID:3636404 KEGG:cal:CaO19.11516 KEGG:cal:CaO19.4033
Uniprot:Q5AJY8
Length = 996
Score = 380 (138.8 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 105/309 (33%), Positives = 154/309 (49%)
Query: 178 LEDLV-CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLAL--HSSVAS 234
LE ++ HV E G+ ILVFL G EI + L + G + L+ L +S++ S
Sbjct: 536 LESVIQIHVSEPAGD--ILVFLTGQEEIETSCEALHERMKLLGENIPELIILPVYSALPS 593
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q ++F P RKVI+ATNIAETSITID + YV D G K N Y+S+ + S+
Sbjct: 594 EMQTRIFEPTPPGSRKVILATNIAETSITIDGIYYVVDPGFVKINMYDSKLGMDSLRVTP 653
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS PG CY LYT YEK M P +PE+QR L L +K + +
Sbjct: 654 ISKAQANQRSGRAGRTGPGKCYRLYTEQAYEKEMIPNTIPEIQRQNLSHTILMLKAMGIH 713
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F + ++PP + TA+ LY + A++ D LT LG +A LP++ + K ++
Sbjct: 714 DLVNF--EFMDPPSTTTMLTALEDLYILDALDDDGNLTTLGRKMADLPMEPALAKTLIQS 771
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHL 474
+ C ILSI A LS ++ F PKD++ ++ K S + DHL
Sbjct: 772 VEYECTEEILSIVAMLSVQTIFYRPKDKQALADQRK-------------SRFHHSLGDHL 818
Query: 475 VLMVAYKKW 483
L+ ++ W
Sbjct: 819 TLLNVFQSW 827
Score = 187 (70.9 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 43/112 (38%), Positives = 65/112 (58%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D N+ + +++DE HER++ D L +LK+ +A P LKVI+ SAT+DSN FSR
Sbjct: 448 DPNMNRYSVIMLDEAHERTIATDVLFALLKN-----AAKQNPNLKVIVTSATLDSNKFSR 502
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPV 120
YF +CP+IT GRT PV + + ++Y LA + I+ S +G +
Sbjct: 503 YFNNCPIITIPGRTFPVEVLYTKA--PEMDY-LAAALESVIQIHVSEPAGDI 551
Score = 37 (18.1 bits), Expect = 1.4e-45, Sum P(3) = 1.4e-45
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 566 VKAILCAGLYPNVAATEQG 584
V+ C+G + N A ++G
Sbjct: 878 VRRTFCSGYFKNSAKRQEG 896
>FB|FBgn0031631 [details] [associations]
symbol:CG3225 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:AE014134 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GO:GO:0016779 GeneTree:ENSGT00700000104241 KO:K13117 OMA:NIFVVPP
EMBL:AY069418 RefSeq:NP_608860.1 UniGene:Dm.300 SMR:Q9VR29
DIP:DIP-18193N IntAct:Q9VR29 MINT:MINT-288733
EnsemblMetazoa:FBtr0077416 GeneID:33680 KEGG:dme:Dmel_CG3225
UCSC:CG3225-RA FlyBase:FBgn0031631 InParanoid:Q9VR29
OrthoDB:EOG4H189P GenomeRNAi:33680 NextBio:784751 Uniprot:Q9VR29
Length = 678
Score = 381 (139.2 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 102/276 (36%), Positives = 143/276 (51%)
Query: 168 LNEDVIDY--DLLEDL-VCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW 224
LNE DY + +E + H E G+ IL FL G E+ LD L +
Sbjct: 237 LNEPCADYVKETVETVWKLHQKEPPGD--ILAFLTGQEEVLEALDLLREYIASSEQENLK 294
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
+L ++ S++S DQ VF PP+ RKV++ATNIAETSITI +VYV DCG K YN +
Sbjct: 295 VLPMYGSMSSTDQLSVFFTPPKGTRKVVLATNIAETSITIPGIVYVIDCGYVKVKWYNPK 354
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
S+V +S ++PG Y LYT+ YE L P Q PEM+R L
Sbjct: 355 TCSDSLVIVPVSKASAIQRAGRAGRMRPGKVYRLYTKSDYEALA-PRQPPEMRRSELSGA 413
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKLPV 403
LQ+K L +G I F + PP + + +A+ L+ + AI+ LT P+G+ LA+LP
Sbjct: 414 ILQLKALGIGNILRFDFPS--PPPAQNLLSALESLFALDAIDEQGNLTKPVGYLLAELPF 471
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYP 439
++ KM+ G GC I++I A L +S F P
Sbjct: 472 SAMLSKMLYVSGQMGCSEEIITIIALLQVQSIFSRP 507
Score = 156 (60.0 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 37/90 (41%), Positives = 58/90 (64%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT +IVDE HER++L D +L +LK +L K+S+ LK+I+ SAT+D++ FS
Sbjct: 155 DPLLTQYGVIIVDEAHERNMLTDMILGLLKKILRKRSS-----LKLIISSATIDASFFSE 209
Query: 69 YF-----GDCPV-ITAEGRTHPVTTYFLED 92
+F G+ V ++ EGR HPV+ ++L +
Sbjct: 210 FFSWPGSGEVSVKLSIEGRMHPVSNFYLNE 239
Score = 53 (23.7 bits), Expect = 1.6e-45, Sum P(3) = 1.6e-45
Identities = 12/40 (30%), Positives = 24/40 (60%)
Query: 613 EVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
E+ IHP+S L + ++V+ E ++T K+F+ T++
Sbjct: 621 ELAIHPNSTLYTLPQAQ--YVVYGELLQTTKLFMNYVTVI 658
Score = 50 (22.7 bits), Expect = 7.3e-09, Sum P(3) = 7.3e-09
Identities = 37/177 (20%), Positives = 76/177 (42%)
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
++L +LG I PP + + +A+ L+ + AI DE+ G+ L K PV L+
Sbjct: 415 LQLKALGIGNILRFDFPSPPPAQNLLSALESLFALDAI--DEQ----GN-LTK-PVGYLL 466
Query: 408 GKMMLFGGIFGCLSPILSISAFLSYKSPFI--YPKDEKQNVERAKLALLTDKLEGLSDSN 465
++ F + LS +L +S + I + Q++ + + + ++
Sbjct: 467 AELP-FSAM---LSKMLYVSGQMGCSEEIITIIALLQVQSIFSRPASAVAQQSGRIAHRK 522
Query: 466 DSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTL 522
+ D + ++ AY + ++ G ++FC +YFL + +R Q T+
Sbjct: 523 FEVAEGDFITMLNAYTGF----VEEGM--TKEFCGQYFLIYRNLKRAHSLREQLITV 573
>WB|WBGene00009922 [details] [associations]
symbol:F52B5.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] InterPro:IPR001374 InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF01424 Pfam:PF04408 PROSITE:PS51061 PROSITE:PS51194
SMART:SM00393 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0009792 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:Z75541
PIR:T22493 RefSeq:NP_492260.1 ProteinModelPortal:Q20644 SMR:Q20644
STRING:Q20644 PaxDb:Q20644 EnsemblMetazoa:F52B5.3 GeneID:172615
KEGG:cel:CELE_F52B5.3 UCSC:F52B5.3 CTD:172615 WormBase:F52B5.3
InParanoid:Q20644 OMA:NSMPETQ NextBio:876269 Uniprot:Q20644
Length = 1425
Score = 391 (142.7 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 150/529 (28%), Positives = 246/529 (46%)
Query: 173 IDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAA-SYRFGGPSSDWLLALHSS 231
+DY LL+ ++ ++ ++ G ILVFLPG +I +L + + +L LHS
Sbjct: 626 VDYVLLDQVIQYLADSPVFGTILVFLPGYEDIQQMLKAIDCWKNSLKNMKNVIVLPLHSQ 685
Query: 232 VASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMV 291
+ S++ +F P+ RK+I+ATNIAE SITI+DV++V D G+ KE ++ + KLS++
Sbjct: 686 MTSINHGDIFKSVPKDTRKIILATNIAEASITIEDVIFVVDTGKVKEKSFDHEAKLSTLT 745
Query: 292 EDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLL 351
I+ V G C LYT Y M Q+ EM+R + ++ L KL
Sbjct: 746 VKPIARSNADQRSGRAGRVANGYCIRLYTEQEYNS-MPETQIAEMKRAAIYDVTLHAKLF 804
Query: 352 SLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAI---------EGDEELTPLGHHL-- 398
+ +KI FLS A EPP++E+I AI+ L ++GA G+EE
Sbjct: 805 APKTLKISEFLSLAPEPPEKESILQAITFLEQIGAFYTPIKIYDNSGNEEGLKNDEEAEN 864
Query: 399 AKLPVD---VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLT 455
++ P D +G++M + LS +L L +P + + E LAL
Sbjct: 865 SENPEDPELTDLGRLMARLPLDPQLSRMLLFGLALKCLTPIVNLVALLASREPYVLALSE 924
Query: 456 DK-LEG-LSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIR 513
D+ L+ + SDHL+ Y + + QFC +FL+ S M M++
Sbjct: 925 DRDLQSKMKFEMAQQDLSDHLL----YIRLCNEFCSKNNSQQNQFCRDHFLNFSTMRMVQ 980
Query: 514 DMRIQFGTLLADIGLINL-PNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCA 572
R Q L LIN+ PN+ D+ + +D FN ++ +++A++ A
Sbjct: 981 GTRRQLLRELVRAKLINISPNR---------DVLTVLTDHH--FNQFSQCWPMIQAVIAA 1029
Query: 573 GLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSS-INSQL----KS 627
G YP + GV+ A+ SNL+K K P + +HPSS + Q+ KS
Sbjct: 1030 GCYPFI-----GVS-ASESNLKKVQTFNDK--PAF--------LHPSSMVKKQIVKMGKS 1073
Query: 628 FEHP---FLVFLEKVET---NKVFLRDTTIVSPFSILLFGGSINVQHQT 670
+ P ++ F E + + ++ T++ + LLF G I + +T
Sbjct: 1074 EKSPRVEYVAFQEMCQMPSDRSLSMKTVTVIPSMTALLFTGPIRLDERT 1122
Score = 173 (66.0 bits), Expect = 1.8e-45, Sum P(2) = 1.8e-45
Identities = 39/99 (39%), Positives = 59/99 (59%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN- 64
L D +G+TH+++DE+HER + D+LLI L++ L+ + P LKVILMSAT++ N
Sbjct: 288 LTSDPVASGITHIVMDEIHEREINTDYLLIALRECLKMR-----PDLKVILMSATIEGNM 342
Query: 65 -LFSRYFGD--CPVITAEGRTHPVTTYFLEDVYESINYR 100
LFS YF + VI E R V ++L+ + Y+
Sbjct: 343 QLFSNYFENHSMDVIRIESRAFDVKVFYLDQILAMTGYQ 381
Score = 41 (19.5 bits), Expect = 1.3e-31, Sum P(2) = 1.3e-31
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 74 PVITAEGRTHPVTTYFLEDVYESIN 98
PVIT E R + F+ DV + N
Sbjct: 480 PVITVEFRPTTPNSVFINDVKYTTN 504
Score = 38 (18.4 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 310 VKPGICYSLYTRHRY 324
VK +C+ L RH++
Sbjct: 1163 VKKNLCHFLRLRHKF 1177
>ZFIN|ZDB-GENE-030131-8589 [details] [associations]
symbol:dhx16 "DEAH (Asp-Glu-Ala-His) box
polypeptide 16" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0035987
"endodermal cell differentiation" evidence=IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-8589 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
GO:GO:0035987 EMBL:BC045393 IPI:IPI00495801 RefSeq:NP_956318.1
UniGene:Dr.76186 ProteinModelPortal:Q7ZVV8 STRING:Q7ZVV8
PRIDE:Q7ZVV8 GeneID:336645 KEGG:dre:336645 InParanoid:Q7ZVV8
NextBio:20811846 ArrayExpress:Q7ZVV8 Bgee:Q7ZVV8 Uniprot:Q7ZVV8
Length = 1054
Score = 389 (142.0 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 103/316 (32%), Positives = 163/316 (51%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYR-FGGPSSDWL-LAL 228
D ++ ++ L HV ++ G+ +LVFL G EI + L R G S+ L L +
Sbjct: 603 DYLEACVVSVLQIHVTQSPGD--VLVFLTGQEEIEACCELLQERCRRLGSKISELLVLPI 660
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q K+F P RKV++ATNIAETS+TID ++YV D G K+ YN++ +
Sbjct: 661 YANLPSDMQAKIFNPTPPGARKVVVATNIAETSLTIDGIIYVIDPGFCKQKSYNAKTGME 720
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S++ S V G C+ LYT ++ M VPE+QR L + L +
Sbjct: 721 SLIVTPCSRASANQRAGRAGRVAAGKCFRLYTAWAFKHEMEETTVPEIQRTNLGNVVLLL 780
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F ++PP E + A+ LY +GA+ ELT LG +A+LPVD ++
Sbjct: 781 KSLGINDLIHF--DFMDPPPHETLVLALEQLYALGALNHLGELTKLGRRMAELPVDPMLS 838
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM+L + C +L+I+A LS + Y PKD+ + + A++ + + G
Sbjct: 839 KMILASEQYKCSEEVLTIAAMLSVNNSIFYRPKDKVVHADNARMNFV---VPG------- 888
Query: 468 STQSDHLVLMVAYKKW 483
DHLVL+ Y +W
Sbjct: 889 ---GDHLVLLNVYTQW 901
Score = 146 (56.5 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 32/81 (39%), Positives = 47/81 (58%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +I+DE HER+L D L ++KD+ A P LKV++ SAT+D+ FS
Sbjct: 521 EPDLASYSVIIIDEAHERTLHTDILFGLIKDI-----ARFRPDLKVLVASATLDTERFSS 575
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+F D PV GR PV Y+
Sbjct: 576 FFDDAPVFRIPGRRFPVDIYY 596
Score = 59 (25.8 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 17/52 (32%), Positives = 26/52 (50%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
DHLVL+ Y +W ++ G Q+C + F+ M RD+R Q L+
Sbjct: 890 DHLVLLNVYTQW----VESGYST--QWCFENFIQFRSMKRARDVRDQLEGLM 935
Score = 49 (22.3 bits), Expect = 1.8e-45, Sum P(4) = 1.8e-45
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
++ V++HP NS L + ++++ E V T K F+R
Sbjct: 978 QQTVYVHP---NSSLFEEQPRWMIYHELVFTTKEFMR 1011
Score = 38 (18.4 bits), Expect = 2.5e-34, Sum P(4) = 2.5e-34
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 77 TAEGRTHPVTTYFLEDVY 94
T G+T + Y LE+ Y
Sbjct: 437 TGSGKTTQIPQYLLEEGY 454
>UNIPROTKB|Q5THR1 [details] [associations]
symbol:DHX35 "Probable ATP-dependent RNA helicase DHX35"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
EMBL:AL023803 UniGene:Hs.444520 HGNC:HGNC:15861 IPI:IPI00642913
SMR:Q5THR1 Ensembl:ENST00000373325 Uniprot:Q5THR1
Length = 679
Score = 414 (150.8 bits), Expect = 8.0e-45, Sum P(3) = 8.0e-45
Identities = 99/287 (34%), Positives = 154/287 (53%)
Query: 168 LNEDVIDY-DLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSS 222
L V DY + V + +T G+G +L FL G E+ +L+++ A R G
Sbjct: 250 LQSPVPDYIKSTVETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRH 309
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+L +++ + S +Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN
Sbjct: 310 LRVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYN 369
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ + +V +S + G CY LYT ++KL + VPEMQR L
Sbjct: 370 PRTAIECLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQS-TVPEMQRSNLA 428
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
+ LQ+K L + + F + PP +++ A+ +LY +G ++ D LT PLG +A+
Sbjct: 429 PVILQLKALGIDNVLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEF 486
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
P++ + KM+L G FGC ILSI+A + ++ F+ P ++K + R
Sbjct: 487 PLNPMFAKMLLESGNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIR 533
Score = 117 (46.2 bits), Expect = 8.0e-45, Sum P(3) = 8.0e-45
Identities = 31/93 (33%), Positives = 53/93 (56%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +++DE HER+L D + +LK + +K+ D L++I+ SAT+D++ F
Sbjct: 164 DPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG--D---LRLIVASATLDADKFRD 218
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 219 FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
Score = 45 (20.9 bits), Expect = 8.0e-45, Sum P(3) = 8.0e-45
Identities = 6/20 (30%), Positives = 15/20 (75%)
Query: 633 LVFLEKVETNKVFLRDTTIV 652
+++ E ++T+K ++RD T +
Sbjct: 629 VIYNEVIQTSKYYMRDVTAI 648
>DICTYBASE|DDB_G0285843 [details] [associations]
symbol:helD "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISS] [GO:0000375 "RNA splicing, via
transesterification reactions" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 dictyBase:DDB_G0285843 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000082 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
KO:K12815 RefSeq:XP_638016.1 EnsemblProtists:DDB0191460
GeneID:8625367 KEGG:ddi:DDB_G0285843 InParanoid:Q54MH4
ProtClustDB:CLSZ2846702 Uniprot:Q54MH4
Length = 1387
Score = 358 (131.1 bits), Expect = 1.6e-44, Sum P(4) = 1.6e-44
Identities = 100/320 (31%), Positives = 160/320 (50%)
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSD--WLLA 227
ED +D + + L HV T G G ILVF+ G +I + + GP + LL
Sbjct: 848 EDYVDSAVKQILSIHV--TQGVGDILVFMTGQEDIETTCATVEERIKQLGPQAPPLTLLP 905
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
++S + S Q K+F + RK IIATNIAETS+T+D ++YV D G K YN + +
Sbjct: 906 IYSQLPSDMQAKIFEKADNGSRKCIIATNIAETSLTVDGILYVIDTGYCKLKVYNPRVGM 965
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S+ IS PG CY LYT ++ + +PE+QR L + L
Sbjct: 966 DSLQVTPISKANANQRSGRAGRTGPGRCYRLYTESAFKYELMDNNIPEIQRTNLGNVVLN 1025
Query: 348 IKLLSLGRIKIFLS-KALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
+K S+G +K L ++PP ++ I ++ L+ +GA++ ++TPLG +++ P+D
Sbjct: 1026 LK--SMG-VKNLLDFDFMDPPPQDNILNSMYQLWVLGALDDQGQITPLGKRMSEFPLDPP 1082
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPK--DEKQNVERAKLALLTDKLEGLSDS 464
+ KM++ GC I++I + LS S F PK +E+ + R K +
Sbjct: 1083 LSKMVIVAEQLGCGQDIVTIVSMLSMPSVFYRPKGAEEESDASREKFFV----------- 1131
Query: 465 NDSSTQSDHLVLMVAYKKWQ 484
+SDHL L+ Y++W+
Sbjct: 1132 ----PESDHLTLLHVYQQWK 1147
Score = 159 (61.0 bits), Expect = 1.6e-44, Sum P(4) = 1.6e-44
Identities = 36/77 (46%), Positives = 50/77 (64%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D NL + +I+DE HERSL D L +LK ++ ++ +D +K+I+ SAT+DS FS
Sbjct: 767 DPNLDKYSAIIMDEAHERSLNTDVLFGILKKVMSRR--YD---MKLIVTSATMDSKKFSM 821
Query: 69 YFGDCPVITAEGRTHPV 85
+FGD PV T GRT PV
Sbjct: 822 FFGDVPVFTIPGRTFPV 838
Score = 80 (33.2 bits), Expect = 1.6e-44, Sum P(4) = 1.6e-44
Identities = 30/109 (27%), Positives = 55/109 (50%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
+SDHL L+ Y++W KI + Q+C+++++ M +R++R G LL DI ++
Sbjct: 1133 ESDHLTLLHVYQQW-KI-----NNYSSQWCAEHYIHIKAMRKVREVR---GQLL-DI-MV 1181
Query: 530 NLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNV 578
K ++ G +W + + Y +HS+ +K I G Y N+
Sbjct: 1182 QHDMKVESCGS------NWDIIRKAITSSYFHHSAKIKGI---GEYVNM 1221
Score = 49 (22.3 bits), Expect = 1.6e-44, Sum P(4) = 1.6e-44
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 616 IHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
+HP+S L + ++V+ E V T+K +++ T V P
Sbjct: 1229 LHPTSALYGL-GYAPDYIVYHELVMTSKEYMQIVTAVDP 1266
Score = 37 (18.1 bits), Expect = 5.5e-06, Sum P(2) = 5.5e-06
Identities = 10/54 (18%), Positives = 27/54 (50%)
Query: 429 FLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
+L+ P + + ++ KL + DK+ ++N+++ D+ ++ A +K
Sbjct: 1268 WLAEMGPMFFSIKKSLKDKKRKLDPIKDKINDNINNNNNNNNIDNSNIINAKEK 1321
>ASPGD|ASPL0000052850 [details] [associations]
symbol:AN1363 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K13117
EMBL:AACD01000018 OrthoDB:EOG4BGD47 RefSeq:XP_658967.1
EnsemblFungi:CADANIAT00001248 GeneID:2877144 KEGG:ani:AN1363.2
OMA:VAEEMRC Uniprot:Q5BDL7
Length = 670
Score = 382 (139.5 bits), Expect = 3.8e-44, Sum P(3) = 3.8e-44
Identities = 99/276 (35%), Positives = 147/276 (53%)
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLAL--HSSVASVDQKKVF 241
H+ E GEG IL+FL G EI + ++ P S LL L ++ + + Q VF
Sbjct: 241 HLQE--GEGDILIFLTGREEIETAIQLISERATTLHPKSQSLLPLPLYAGLTTDQQMYVF 298
Query: 242 LRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXX 301
PE RKV+++TNIAE S+TI+ +VYV DCG K Y+ + ++ IS
Sbjct: 299 EPAPENTRKVVVSTNIAEASVTINGIVYVVDCGFAKLRAYDPSTGIETLTAVPISKAAAV 358
Query: 302 XXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLS 361
KPG C+ LYT+H YE+L +PE+QR L + +Q+K L + I F
Sbjct: 359 QRAGRAGRTKPGKCFRLYTQHAYEQLPDA-TIPEIQRSNLAPVIMQLKALGIDNIVRF-- 415
Query: 362 KALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKLPVDVLIGKMMLFGGIFGCL 420
L P + + A +LY +GAI+ +LT PLG +A+L VD ++ K++L FGCL
Sbjct: 416 DFLTSPPADLVIRAFELLYSLGAIDDYAKLTKPLGMRMAELAVDPMMAKVLLSAQSFGCL 475
Query: 421 SPILSISAFLSYKSPFIYPKD-EKQNVE--RAKLAL 453
S IL+I+A +S + D +K++ E R K A+
Sbjct: 476 SEILTIAAMVSLQGAVWVQHDGDKKSSESSRRKFAV 511
Score = 134 (52.2 bits), Expect = 3.8e-44, Sum P(3) = 3.8e-44
Identities = 42/106 (39%), Positives = 60/106 (56%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L+ + ++VDE HERSL D LL +LK +L+++ P+L++I+ SAT+ + F R
Sbjct: 131 DPLLSRYSVIMVDEAHERSLSTDILLGILKKILKRR-----PELRIIVSSATLQAEDFLR 185
Query: 69 YF-GD----CP----------VITAEGRTHPVTTYFLEDVYESINY 99
YF GD P +I+ EGR +PV T FLE E NY
Sbjct: 186 YFAGDESQQGPNGEVGGNTGKIISIEGRMYPVDTLFLESAAE--NY 229
Score = 60 (26.2 bits), Expect = 3.8e-44, Sum P(3) = 3.8e-44
Identities = 18/60 (30%), Positives = 32/60 (53%)
Query: 610 GRREVHIHPSSINSQLKSFEHPFLVFLEKVETN-KVFLRDTTIVSPFSILLFGGSI-NVQ 667
G +H HPSS+ K+ +++F E ++T K F+RD T + +L + + N+Q
Sbjct: 614 GGMTLHAHPSSLMFNRKA---DWVIFHEIMQTGEKTFIRDITKIEKSYLLEYAPNYYNMQ 670
>WB|WBGene00003393 [details] [associations]
symbol:mog-5 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0002009 "morphogenesis
of an epithelium" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0040022 "feminization of hermaphroditic germ-line"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 375 (137.1 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 96/303 (31%), Positives = 153/303 (50%)
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLAL--HSSVASVDQKKVF 241
H+ E G+ +LVFL G EI + L + GP L+ L + ++ S Q ++F
Sbjct: 743 HLTEPPGD--VLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIF 800
Query: 242 LRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXX 301
P RKV+IATNIAETS+TID + YV D G K+ YN + + S+V IS
Sbjct: 801 DPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAK 860
Query: 302 XXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLS 361
PG CY LYT + M P VPE+QR L LQ+K + + + F
Sbjct: 861 QRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDF-- 918
Query: 362 KALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLS 421
++ P +++ TA++ L+ + A++GD LT LG +A+ P++ + K+++ GC
Sbjct: 919 DFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSE 978
Query: 422 PILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYK 481
+L+I A L+ ++ F PK+++ + ++ K + EG DHL L+ Y
Sbjct: 979 EVLTIVAMLNVQNIFYRPKEKQDHADQKKAKF--HQPEG-----------DHLTLLAVYN 1025
Query: 482 KWQ 484
W+
Sbjct: 1026 SWK 1028
Score = 150 (57.9 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 35/84 (41%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +L+G + +++DE HER++ D VL LL K +A P+LK+I+ SAT+DS FS
Sbjct: 648 DPDLSGYSLIMLDEAHERTIHTD----VLFGLL-KAAARKRPELKLIITSATLDSVKFSE 702
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT PV + +
Sbjct: 703 YFLEAPIFTIPGRTFPVEILYTRE 726
Score = 69 (29.3 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 577 NVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHP-FLVF 635
+V+ ++ + N K + + DG+ V+IHPSS Q + P ++V+
Sbjct: 1074 DVSRVQKAICSGFFRNAAK--RDPQEGYRTLTDGQN-VYIHPSSACFQ----QQPEWVVY 1126
Query: 636 LEKVETNKVFLRDTTIVSPFSILLFGGS 663
E V T K ++R+ T + P ++ F S
Sbjct: 1127 HELVMTTKEYMREVTAIDPKWLVEFAPS 1154
>UNIPROTKB|Q09530 [details] [associations]
symbol:mog-5 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006915
GO:GO:0002119 GO:GO:0008380 GO:GO:0018996 GO:GO:0006397
GO:GO:0040011 GO:GO:0003723 GO:GO:0042127 GO:GO:0007281
GO:GO:0048589 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0040022 GO:GO:0008026 EMBL:FO081042 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN EMBL:AF286899 PIR:T15921 RefSeq:NP_495019.1
UniGene:Cel.7556 ProteinModelPortal:Q09530 SMR:Q09530
DIP:DIP-25759N IntAct:Q09530 MINT:MINT-1046882 STRING:Q09530
PaxDb:Q09530 EnsemblMetazoa:EEED8.5 GeneID:173920
KEGG:cel:CELE_EEED8.5 UCSC:EEED8.5 CTD:173920 WormBase:EEED8.5
InParanoid:Q09530 NextBio:881669 Uniprot:Q09530
Length = 1200
Score = 375 (137.1 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 96/303 (31%), Positives = 153/303 (50%)
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLAL--HSSVASVDQKKVF 241
H+ E G+ +LVFL G EI + L + GP L+ L + ++ S Q ++F
Sbjct: 743 HLTEPPGD--VLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIF 800
Query: 242 LRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXX 301
P RKV+IATNIAETS+TID + YV D G K+ YN + + S+V IS
Sbjct: 801 DPAPAGKRKVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAK 860
Query: 302 XXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLS 361
PG CY LYT + M P VPE+QR L LQ+K + + + F
Sbjct: 861 QRSGRAGRTGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDF-- 918
Query: 362 KALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLS 421
++ P +++ TA++ L+ + A++GD LT LG +A+ P++ + K+++ GC
Sbjct: 919 DFMDAPPLDSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSE 978
Query: 422 PILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYK 481
+L+I A L+ ++ F PK+++ + ++ K + EG DHL L+ Y
Sbjct: 979 EVLTIVAMLNVQNIFYRPKEKQDHADQKKAKF--HQPEG-----------DHLTLLAVYN 1025
Query: 482 KWQ 484
W+
Sbjct: 1026 SWK 1028
Score = 150 (57.9 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 35/84 (41%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +L+G + +++DE HER++ D VL LL K +A P+LK+I+ SAT+DS FS
Sbjct: 648 DPDLSGYSLIMLDEAHERTIHTD----VLFGLL-KAAARKRPELKLIITSATLDSVKFSE 702
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT PV + +
Sbjct: 703 YFLEAPIFTIPGRTFPVEILYTRE 726
Score = 69 (29.3 bits), Expect = 5.0e-44, Sum P(3) = 5.0e-44
Identities = 23/88 (26%), Positives = 42/88 (47%)
Query: 577 NVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHP-FLVF 635
+V+ ++ + N K + + DG+ V+IHPSS Q + P ++V+
Sbjct: 1074 DVSRVQKAICSGFFRNAAK--RDPQEGYRTLTDGQN-VYIHPSSACFQ----QQPEWVVY 1126
Query: 636 LEKVETNKVFLRDTTIVSPFSILLFGGS 663
E V T K ++R+ T + P ++ F S
Sbjct: 1127 HELVMTTKEYMREVTAIDPKWLVEFAPS 1154
>UNIPROTKB|G4N1N4 [details] [associations]
symbol:MGG_07501 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CM001233 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12813 RefSeq:XP_003711413.1
EnsemblFungi:MGG_07501T0 GeneID:2683421 KEGG:mgr:MGG_07501
Uniprot:G4N1N4
Length = 1016
Score = 380 (138.8 bits), Expect = 7.3e-44, Sum P(3) = 7.3e-44
Identities = 102/305 (33%), Positives = 157/305 (51%)
Query: 182 VCHVDETCGEGAILVFLPGVAEIHILLDRLAASYR-FGGPSSDWLLA-LHSSVASVDQKK 239
V + T +G IL+FL G EI ++ + R G + ++ +++++ S Q K
Sbjct: 573 VFQIHTTQPKGDILIFLTGQDEIEAAEMQITETARKLGSRVKELVICPIYANLPSELQSK 632
Query: 240 VFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXX 299
+F PE RKV++ATNIAETS+TID +VYV D G KEN YN +S++V S
Sbjct: 633 IFEPTPENARKVVLATNIAETSLTIDGIVYVIDPGYVKENVYNPATGMSNLVVVPCSRAS 692
Query: 300 XXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIF 359
V PG C+ LYT++ Y M PE+QR L + LQ+K L + + F
Sbjct: 693 ANQRSGRAGRVGPGKCFRLYTKYAYMNEMEESTTPEIQRTNLNGVVLQLKSLGINELLDF 752
Query: 360 LSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGC 419
+ ++PP EA+ A++ L+ + + ELT LG +A+ P D ++ K +L GC
Sbjct: 753 --EFMDPPPTEALIGALNQLFALQGLNHKGELTKLGRQMAEFPTDPMLAKAVLAADKEGC 810
Query: 420 LSPILSISAFLSYKSP-FIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMV 478
+ +LSI A LS S F PKD++ + + A+ T K EG DH+ L+
Sbjct: 811 VEEVLSIVAMLSEASALFFRPKDKQVHADAAR-GRFTVK-EG----------GDHVTLLN 858
Query: 479 AYKKW 483
+ +W
Sbjct: 859 IWNQW 863
Score = 142 (55.0 bits), Expect = 7.3e-44, Sum P(3) = 7.3e-44
Identities = 28/81 (34%), Positives = 50/81 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L+ + +++DE HER++ D LL ++KDL A + LK+++ SAT+++ F+
Sbjct: 482 EPDLSSYSALMIDEAHERTVHTDILLALVKDL-----ARERKDLKLLISSATMNAEKFAS 536
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF D P+ GR +PV Y+
Sbjct: 537 YFDDAPIFNIPGRRYPVDIYY 557
Score = 66 (28.3 bits), Expect = 7.3e-44, Sum P(3) = 7.3e-44
Identities = 21/87 (24%), Positives = 36/87 (41%)
Query: 571 CAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEH 630
C G+ N+ ++ + N + S V V+IHPSS+ Q E
Sbjct: 907 CGGI-SNMPPIKRAITAGFFPNAARMQRSGDSYRTV--KNNTTVYIHPSSVMMQ----ED 959
Query: 631 P---FLVFLEKVETNKVFLRDTTIVSP 654
P +++ E V+T K ++R + P
Sbjct: 960 PPPRMVIYYELVQTTKEYMRSCMPIEP 986
Score = 43 (20.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 10/40 (25%), Positives = 21/40 (52%)
Query: 566 VKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHP 605
+K + AG +PN A ++ +G + ++ +N+ HP
Sbjct: 916 IKRAITAGFFPNAARMQR--SGDSYRTVK--NNTTVYIHP 951
>TAIR|locus:2088847 [details] [associations]
symbol:AT3G26560 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA;ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=RCA] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005739 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 EMBL:X98130
EMBL:X97970 EMBL:AB028611 IPI:IPI00530246 RefSeq:NP_189288.1
UniGene:At.46918 ProteinModelPortal:Q38953 SMR:Q38953 STRING:Q38953
PaxDb:Q38953 PRIDE:Q38953 EnsemblPlants:AT3G26560.1 GeneID:822264
KEGG:ath:AT3G26560 GeneFarm:1800 TAIR:At3g26560 InParanoid:Q38953
KO:K12818 OMA:NAWCYEN PhylomeDB:Q38953 ProtClustDB:CLSN2684863
Genevestigator:Q38953 GermOnline:AT3G26560 Uniprot:Q38953
Length = 1168
Score = 388 (141.6 bits), Expect = 2.1e-43, Sum P(3) = 2.1e-43
Identities = 103/321 (32%), Positives = 161/321 (50%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K+ D +D L+ L H+ E EG ILVFL G EI L + G + L
Sbjct: 700 KQPETDYLDAALITVLQIHLTEP--EGDILVFLTGQEEIDSACQSLYERMKGLGKNVPEL 757
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F PP RKV++ATNIAE S+TID + YV D G K+N YN
Sbjct: 758 IILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNP 817
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
++ L S+V IS PG CY LYT Y M P +PE+QR+ L
Sbjct: 818 KQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGM 877
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++PP+ +A+ +A+ LY +GA++ + LT LG +A+ P+
Sbjct: 878 TTLTMKAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPL 935
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ + KM+L GC IL++ A + + F P++++ ++ + EG
Sbjct: 936 EPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFFQP--EG--- 990
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
DHL L+ Y+ W+
Sbjct: 991 --------DHLTLLAVYEAWK 1003
Score = 137 (53.3 bits), Expect = 2.1e-43, Sum P(3) = 2.1e-43
Identities = 30/77 (38%), Positives = 50/77 (64%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D+NL+ + +++DE HER++ D L +LK L++++ L++I+ SAT+D+ FS
Sbjct: 623 DENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRL-----DLRLIVTSATLDAEKFSG 677
Query: 69 YFGDCPVITAEGRTHPV 85
YF +C + T GRT PV
Sbjct: 678 YFFNCNIFTIPGRTFPV 694
Score = 61 (26.5 bits), Expect = 2.1e-43, Sum P(3) = 2.1e-43
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
V+IHPSS Q + ++++ + V T K ++R+ T++ P
Sbjct: 1083 VYIHPSSALFQRQP---DWVIYHDLVMTTKEYMREVTVIDP 1120
Score = 40 (19.1 bits), Expect = 2.6e-33, Sum P(3) = 2.6e-33
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 51 KLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVY 94
KLK L+ A D+ + G+ T G+T VT Y E Y
Sbjct: 519 KLKKELIQAVHDNQVLV-VIGE----TGSGKTTQVTQYLAEAGY 557
>UNIPROTKB|O60231 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 EMBL:BA000025 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL845353 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813 GO:GO:0003724
HOVERGEN:HBG039428 OMA:GTLHREF EMBL:AB001601 EMBL:AB011149
EMBL:BC008825 EMBL:BC009392 IPI:IPI00552073 RefSeq:NP_001157711.1
RefSeq:NP_003578.2 UniGene:Hs.485060 ProteinModelPortal:O60231
SMR:O60231 IntAct:O60231 MINT:MINT-5003862 STRING:O60231
PhosphoSite:O60231 PaxDb:O60231 PRIDE:O60231 DNASU:8449
Ensembl:ENST00000376442 Ensembl:ENST00000383577
Ensembl:ENST00000417308 Ensembl:ENST00000421095
Ensembl:ENST00000424672 Ensembl:ENST00000451456
Ensembl:ENST00000458094 GeneID:8449 KEGG:hsa:8449 UCSC:uc003nqz.3
CTD:8449 GeneCards:GC06M030620 HGNC:HGNC:2739 HPA:HPA051455
MIM:603405 neXtProt:NX_O60231 PharmGKB:PA27205 InParanoid:O60231
OrthoDB:EOG4VHK5Q PhylomeDB:O60231 GenomeRNAi:8449 NextBio:31614
ArrayExpress:O60231 Bgee:O60231 CleanEx:HS_DHX16
Genevestigator:O60231 GermOnline:ENSG00000204560 Uniprot:O60231
Length = 1041
Score = 371 (135.7 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
Identities = 102/316 (32%), Positives = 157/316 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLA-ASYRFGGPSSDWL-LAL 228
D ++ ++ L HV + G+ ILVFL G EI + L R G + L L +
Sbjct: 590 DYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 647
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q ++F P RKV++ATNIAETS+TI+ ++YV D G K+ YN + +
Sbjct: 648 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 707
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ S V G C+ LYT Y+ + VPE+QR L + L +
Sbjct: 708 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 767
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP E + A+ LY +GA+ ELT G +A+LPVD ++
Sbjct: 768 KSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLS 825
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM+L + C IL+++A LS + Y PKD+ + + A++ L G
Sbjct: 826 KMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF---LPG------- 875
Query: 468 STQSDHLVLMVAYKKW 483
DHLVL+ Y +W
Sbjct: 876 ---GDHLVLLNVYTQW 888
Score = 140 (54.3 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + V+VDE HER+L D L ++KD+ A P+LKV++ SAT+D+ FS
Sbjct: 508 EPDLASYSVVMVDEAHERTLHTDILFGLIKDV-----ARFRPELKVLVASATMDTARFST 562
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+F D PV GR PV ++
Sbjct: 563 FFDDAPVFRIPGRRFPVDIFY 583
Score = 64 (27.6 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL--ADIGL 528
DHLVL+ Y +W + + + Q+C + F+ M RD+R Q LL ++GL
Sbjct: 877 DHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 929
Score = 47 (21.6 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
++ V IHP NS L + +L++ E V T K F+R
Sbjct: 965 QQTVFIHP---NSSLFEQQPRWLLYHELVLTTKEFMR 998
Score = 40 (19.1 bits), Expect = 9.7e-33, Sum P(4) = 9.7e-33
Identities = 13/51 (25%), Positives = 20/51 (39%)
Query: 77 TAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKK 127
T G+T + Y E+ Y + ++A R A S + V G K
Sbjct: 424 TGSGKTTQIPQYLFEEGYTNKGMKIACTQPR--RVAAMSVAARVAREMGVK 472
>UNIPROTKB|F1PGL2 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
GeneTree:ENSGT00700000104241 OMA:GTLHREF CTD:8449 EMBL:AAEX03008197
RefSeq:XP_538827.2 Ensembl:ENSCAFT00000000685 GeneID:481706
KEGG:cfa:481706 Uniprot:F1PGL2
Length = 1042
Score = 371 (135.7 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
Identities = 102/316 (32%), Positives = 157/316 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLA-ASYRFGGPSSDWL-LAL 228
D ++ ++ L HV + G+ ILVFL G EI + L R G + L L +
Sbjct: 591 DYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 648
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q ++F P RKV++ATNIAETS+TI+ ++YV D G K+ YN + +
Sbjct: 649 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 708
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ S V G C+ LYT Y+ + VPE+QR L + L +
Sbjct: 709 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 768
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP E + A+ LY +GA+ ELT G +A+LPVD ++
Sbjct: 769 KSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLS 826
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM+L + C IL+++A LS + Y PKD+ + + A++ L G
Sbjct: 827 KMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF---LPG------- 876
Query: 468 STQSDHLVLMVAYKKW 483
DHLVL+ Y +W
Sbjct: 877 ---GDHLVLLNVYTQW 889
Score = 140 (54.3 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + V+VDE HER+L D L ++KD+ A P+LKV++ SAT+D+ FS
Sbjct: 509 EPDLASYSVVMVDEAHERTLHTDILFGLIKDV-----ARFRPELKVLVASATLDTARFST 563
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+F D PV GR PV ++
Sbjct: 564 FFDDAPVFRIPGRRFPVDIFY 584
Score = 64 (27.6 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL--ADIGL 528
DHLVL+ Y +W + + + Q+C + F+ M RD+R Q LL ++GL
Sbjct: 878 DHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 930
Score = 47 (21.6 bits), Expect = 4.8e-43, Sum P(4) = 4.8e-43
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
++ V IHP NS L + +L++ E V T K F+R
Sbjct: 966 QQTVFIHP---NSSLFEEQPRWLLYHELVLTTKEFMR 999
Score = 39 (18.8 bits), Expect = 1.2e-32, Sum P(4) = 1.2e-32
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 77 TAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKK 127
T G+T + Y E+ Y ++A R A S + V G K
Sbjct: 425 TGSGKTTQIPQYLFEEGYTKKGMKIACTQPR--RVAAMSVAARVAREMGVK 473
>RGD|1302963 [details] [associations]
symbol:Dhx16 "DEAH (Asp-Glu-Ala-His) box polypeptide 16"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1302963 GO:GO:0005524 GO:GO:0003676 EMBL:BX883048
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12813
HOVERGEN:HBG039428 CTD:8449 EMBL:CH474118 IPI:IPI00421973
RefSeq:NP_997661.1 UniGene:Rn.6832 GeneID:294232 KEGG:rno:294232
UCSC:RGD:1302963 NextBio:637799 Genevestigator:Q6MG13
Uniprot:Q6MG13
Length = 1044
Score = 371 (135.7 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 102/316 (32%), Positives = 157/316 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLA-ASYRFGGPSSDWL-LAL 228
D ++ ++ L HV + G+ ILVFL G EI + L R G + L L +
Sbjct: 593 DYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 650
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q ++F P RKV++ATNIAETS+TI+ ++YV D G K+ YN + +
Sbjct: 651 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 710
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ S V G C+ LYT Y+ + VPE+QR L + L +
Sbjct: 711 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 770
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP E + A+ LY +GA+ ELT G +A+LPVD ++
Sbjct: 771 KSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLS 828
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM+L + C IL+++A LS + Y PKD+ + + A++ L G
Sbjct: 829 KMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF---LPG------- 878
Query: 468 STQSDHLVLMVAYKKW 483
DHLVL+ Y +W
Sbjct: 879 ---GDHLVLLNVYTQW 891
Score = 140 (54.3 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + V+VDE HER+L D L ++KD+ A P+LKV++ SAT+D+ FS
Sbjct: 511 EPDLASYSVVMVDEAHERTLHTDILFGLIKDV-----ARFRPELKVLVASATLDTARFSA 565
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+F D PV GR PV ++
Sbjct: 566 FFDDAPVFRIPGRRFPVDIFY 586
Score = 64 (27.6 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL--ADIGL 528
DHLVL+ Y +W + + + Q+C + F+ M RD+R Q LL ++GL
Sbjct: 880 DHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 932
Score = 47 (21.6 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
++ V IHP NS L + +L++ E V T K F+R
Sbjct: 968 QQTVFIHP---NSSLFEQQPRWLLYHELVLTTKEFMR 1001
Score = 39 (18.8 bits), Expect = 1.3e-32, Sum P(4) = 1.3e-32
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 77 TAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKK 127
T G+T + Y E+ Y ++A R A S + V G K
Sbjct: 427 TGSGKTTQIPQYLFEEGYTKKGMKIACTQPR--RVAAMSVAARVAREMGVK 475
>UNIPROTKB|F1RU83 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:GTLHREF EMBL:CU480634
Ensembl:ENSSSCT00000001498 Uniprot:F1RU83
Length = 1045
Score = 371 (135.7 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 102/316 (32%), Positives = 157/316 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLA-ASYRFGGPSSDWL-LAL 228
D ++ ++ L HV + G+ ILVFL G EI + L R G + L L +
Sbjct: 594 DYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 651
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q ++F P RKV++ATNIAETS+TI+ ++YV D G K+ YN + +
Sbjct: 652 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 711
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ S V G C+ LYT Y+ + VPE+QR L + L +
Sbjct: 712 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 771
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP E + A+ LY +GA+ ELT G +A+LPVD ++
Sbjct: 772 KSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLS 829
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM+L + C IL+++A LS + Y PKD+ + + A++ L G
Sbjct: 830 KMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF---LPG------- 879
Query: 468 STQSDHLVLMVAYKKW 483
DHLVL+ Y +W
Sbjct: 880 ---GDHLVLLNVYTQW 892
Score = 140 (54.3 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + V+VDE HER+L D L ++KD+ A P+LKV++ SAT+D+ FS
Sbjct: 512 EPDLASYSVVMVDEAHERTLHTDILFGLIKDV-----ARFRPELKVLVASATLDTARFST 566
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+F D PV GR PV ++
Sbjct: 567 FFDDAPVFRIPGRRFPVDIFY 587
Score = 64 (27.6 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL--ADIGL 528
DHLVL+ Y +W + + + Q+C + F+ M RD+R Q LL ++GL
Sbjct: 881 DHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 933
Score = 47 (21.6 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
++ V IHP NS L + +L++ E V T K F+R
Sbjct: 969 QQTVFIHP---NSSLFEEQPRWLLYHELVLTTKEFMR 1002
Score = 39 (18.8 bits), Expect = 1.3e-32, Sum P(4) = 1.3e-32
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 77 TAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKK 127
T G+T + Y E+ Y ++A R A S + V G K
Sbjct: 428 TGSGKTTQIPQYLFEEGYTQKGMKIACTQPR--RVAAMSVAARVAREMGVK 476
>UNIPROTKB|Q767K6 [details] [associations]
symbol:DHX16 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX16" species:9823 "Sus scrofa"
[GO:0005634 "nucleus" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 EMBL:AB113357 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB113356 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 HOVERGEN:HBG039428 CTD:8449 OrthoDB:EOG4VHK5Q
RefSeq:NP_001116578.1 UniGene:Ssc.15273 ProteinModelPortal:Q767K6
GeneID:100144456 KEGG:ssc:100144456 Uniprot:Q767K6
Length = 1045
Score = 371 (135.7 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 102/316 (32%), Positives = 157/316 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLA-ASYRFGGPSSDWL-LAL 228
D ++ ++ L HV + G+ ILVFL G EI + L R G + L L +
Sbjct: 594 DYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 651
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q ++F P RKV++ATNIAETS+TI+ ++YV D G K+ YN + +
Sbjct: 652 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 711
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ S V G C+ LYT Y+ + VPE+QR L + L +
Sbjct: 712 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 771
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP E + A+ LY +GA+ ELT G +A+LPVD ++
Sbjct: 772 KSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLS 829
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM+L + C IL+++A LS + Y PKD+ + + A++ L G
Sbjct: 830 KMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF---LPG------- 879
Query: 468 STQSDHLVLMVAYKKW 483
DHLVL+ Y +W
Sbjct: 880 ---GDHLVLLNVYTQW 892
Score = 140 (54.3 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + V+VDE HER+L D L ++KD+ A P+LKV++ SAT+D+ FS
Sbjct: 512 EPDLASYSVVMVDEAHERTLHTDILFGLIKDV-----ARFRPELKVLVASATLDTARFST 566
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+F D PV GR PV ++
Sbjct: 567 FFDDAPVFRIPGRRFPVDIFY 587
Score = 64 (27.6 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL--ADIGL 528
DHLVL+ Y +W + + + Q+C + F+ M RD+R Q LL ++GL
Sbjct: 881 DHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 933
Score = 47 (21.6 bits), Expect = 4.9e-43, Sum P(4) = 4.9e-43
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
++ V IHP NS L + +L++ E V T K F+R
Sbjct: 969 QQTVFIHP---NSSLFEEQPRWLLYHELVLTTKEFMR 1002
Score = 39 (18.8 bits), Expect = 1.3e-32, Sum P(4) = 1.3e-32
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 77 TAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKK 127
T G+T + Y E+ Y ++A R A S + V G K
Sbjct: 428 TGSGKTTQIPQYLFEEGYTQKGMKIACTQPR--RVAAMSVAARVAREMGVK 476
>UNIPROTKB|E1BF68 [details] [associations]
symbol:DHX16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12813 GeneTree:ENSGT00700000104241 OMA:GTLHREF
CTD:8449 EMBL:DAAA02055402 IPI:IPI00691986 RefSeq:NP_001193139.1
UniGene:Bt.22201 PRIDE:E1BF68 Ensembl:ENSBTAT00000009148
GeneID:506405 KEGG:bta:506405 NextBio:20867594 Uniprot:E1BF68
Length = 1045
Score = 371 (135.7 bits), Expect = 6.3e-43, Sum P(4) = 6.3e-43
Identities = 102/316 (32%), Positives = 157/316 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLA-ASYRFGGPSSDWL-LAL 228
D ++ ++ L HV + G+ ILVFL G EI + L R G + L L +
Sbjct: 594 DYLEACVVSVLQIHVTQPPGD--ILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPI 651
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q ++F P RKV++ATNIAETS+TI+ ++YV D G K+ YN + +
Sbjct: 652 YANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGME 711
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ S V G C+ LYT Y+ + VPE+QR L + L +
Sbjct: 712 SLTVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLL 771
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP E + A+ LY +GA+ ELT G +A+LPVD ++
Sbjct: 772 KSLGIHDLMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLS 829
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM+L + C IL+++A LS + Y PKD+ + + A++ L G
Sbjct: 830 KMILASEKYSCSEEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFF---LPG------- 879
Query: 468 STQSDHLVLMVAYKKW 483
DHLVL+ Y +W
Sbjct: 880 ---GDHLVLLNVYTQW 892
Score = 139 (54.0 bits), Expect = 6.3e-43, Sum P(4) = 6.3e-43
Identities = 31/81 (38%), Positives = 48/81 (59%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + V+VDE HER+L D L ++KD+ A P+LKV++ SAT+D+ FS
Sbjct: 512 EPDLASYSVVMVDEAHERTLHTDILFGLIKDV-----ARFRPELKVLVASATLDTARFST 566
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+F D P+ GR PV ++
Sbjct: 567 FFDDAPIFRIPGRRFPVDIFY 587
Score = 64 (27.6 bits), Expect = 6.3e-43, Sum P(4) = 6.3e-43
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL--ADIGL 528
DHLVL+ Y +W + + + Q+C + F+ M RD+R Q LL ++GL
Sbjct: 881 DHLVLLNVYTQWAE------SGYSSQWCYENFVQFRSMRRARDVREQLEGLLERVEVGL 933
Score = 47 (21.6 bits), Expect = 6.3e-43, Sum P(4) = 6.3e-43
Identities = 14/37 (37%), Positives = 21/37 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
++ V IHP NS L + +L++ E V T K F+R
Sbjct: 969 QQTVFIHP---NSSLFEEQPRWLLYHELVLTTKEFMR 1002
Score = 39 (18.8 bits), Expect = 1.3e-32, Sum P(4) = 1.3e-32
Identities = 13/51 (25%), Positives = 19/51 (37%)
Query: 77 TAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKK 127
T G+T + Y E+ Y ++A R A S + V G K
Sbjct: 428 TGSGKTTQIPQYLFEEGYTKKGMKIACTQPR--RVAAMSVAARVAREMGVK 476
>UNIPROTKB|G4NFJ0 [details] [associations]
symbol:MGG_08807 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp22" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:CM001236 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 KO:K12818 RefSeq:XP_003719164.1
ProteinModelPortal:G4NFJ0 EnsemblFungi:MGG_08807T0 GeneID:2678973
KEGG:mgr:MGG_08807 Uniprot:G4NFJ0
Length = 1207
Score = 371 (135.7 bits), Expect = 6.7e-43, Sum P(4) = 6.7e-43
Identities = 106/317 (33%), Positives = 156/317 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLAL-- 228
D +D L + H+DE G+ IL+FL G EI + L + GPS L+ L
Sbjct: 732 DYLDAALTTVMQIHIDEPPGD--ILLFLTGQEEIDTSCEILFERMKALGPSVPELIILPV 789
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
+S++ + Q ++F P RKV+IATNIAETSITID + YV D G K+N Y+ + +
Sbjct: 790 YSALPNEMQSRIFDPAPPGSRKVVIATNIAETSITIDHIYYVVDPGFVKQNAYDPKLGMD 849
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+V IS PG C+ LYT Y+ M P +PE+QR L L +
Sbjct: 850 SLVVTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQTEMLPTSIPEIQRQNLSNTILLL 909
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K + + + F ++PP + TA+ LY + A++ + LT LG +A P++ +
Sbjct: 910 KAMGINDLLHF--DFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLS 967
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSS 468
K+++ C +LSI A L+ + F PK EKQ AK A K D N
Sbjct: 968 KVLIASVEMRCSDEMLSIVAMLNLPNVFYRPK-EKQTQADAKKA----KFH---DPN--- 1016
Query: 469 TQSDHLVLMVAYKKWQK 485
DHL L+ Y W++
Sbjct: 1017 --GDHLTLLNVYNAWKQ 1031
Score = 158 (60.7 bits), Expect = 6.7e-43, Sum P(4) = 6.7e-43
Identities = 32/84 (38%), Positives = 51/84 (60%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +L + +++DE HER++ D L +LK ++ P LK+I+ SAT+D++ FS
Sbjct: 650 DPDLKRYSVIMLDEAHERTIATDVLFALLKKATRRR-----PDLKIIVTSATLDADKFSA 704
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF +CP+ T GRT PV + +D
Sbjct: 705 YFNECPIFTIPGRTFPVEILYSKD 728
Score = 56 (24.8 bits), Expect = 6.7e-43, Sum P(4) = 6.7e-43
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
DHL L+ Y W++ ++ ++ +C++ F+ + RD+R Q ++
Sbjct: 1018 DHLTLLNVYNAWKQ------SRYSKPWCAENFIQFRALTRARDVRNQIERIM 1063
Score = 46 (21.3 bits), Expect = 1.9e-06, Sum P(3) = 1.9e-06
Identities = 30/129 (23%), Positives = 56/129 (43%)
Query: 427 SAFLSYKSPFIYPKDEKQNVERAKLAL----LTDKLE-GLSDS---NDSSTQSDHLVLMV 478
+A+ + P P+ ++QN+ L L + D L D N T + L +
Sbjct: 883 AAYQTEMLPTSIPEIQRQNLSNTILLLKAMGINDLLHFDFMDPPPINTMLTALEELYALS 942
Query: 479 AYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTG 538
A + +L + G K A F + LS ++ + +MR +L+ + ++NLPN
Sbjct: 943 ALDD-EGLLTRLGRKMAD-FPMEPSLSKVLIASV-EMRCS-DEMLSIVAMLNLPNVFYRP 998
Query: 539 GKKKDDLDS 547
+K+ D+
Sbjct: 999 KEKQTQADA 1007
Score = 40 (19.1 bits), Expect = 6.7e-43, Sum P(4) = 6.7e-43
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 566 VKAILCAGLYPNVAATEQ 583
V+ LC+G + N A +Q
Sbjct: 1080 VRQALCSGFFRNAARKDQ 1097
>POMBASE|SPBC19C2.01 [details] [associations]
symbol:cdc28 "ATP-dependent RNA helicase Cdc28"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005524 "ATP binding"
evidence=IC] [GO:0005681 "spliceosomal complex" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=ISO] [GO:0045292 "mRNA cis
splicing, via spliceosome" evidence=IMP] [GO:0046540 "U4/U6 x U5
tri-snRNP complex" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPBC19C2.01
GO:GO:0005524 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0005681
GO:GO:0005682 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0046540 GO:GO:0004004 EMBL:U48733 PIR:T46568 PIR:T50372
RefSeq:NP_595686.2 ProteinModelPortal:Q10752 STRING:Q10752
EnsemblFungi:SPBC19C2.01.1 GeneID:2540707 KEGG:spo:SPBC19C2.01
HOGENOM:HOG000175261 KO:K12813 OMA:RIDDHRD OrthoDB:EOG4SBJ63
NextBio:20801829 GO:GO:0045292 Uniprot:Q10752
Length = 1055
Score = 371 (135.7 bits), Expect = 8.1e-43, Sum P(3) = 8.1e-43
Identities = 94/305 (30%), Positives = 149/305 (48%)
Query: 182 VCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLA--LHSSVASVDQKK 239
+ + T G ILVFL G EI ++ + + R G ++ +++++ S Q K
Sbjct: 618 ILQIHTTQPAGDILVFLTGQDEIELMSENMQELCRILGKRIPEIILCPIYANLPSELQAK 677
Query: 240 VFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXX 299
+F P RKV++ATNIAETSITID V +V D G K+N YN + + S+V S
Sbjct: 678 IFDPTPPGARKVVLATNIAETSITIDGVNFVIDSGFVKQNMYNPRTGMESLVSVPCSRAS 737
Query: 300 XXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIF 359
V PG C+ LYTR Y + PE+QR L + L +K L + + F
Sbjct: 738 ADQRAGRAGRVGPGKCFRLYTRRTYNNELDMVTSPEIQRTNLTNIVLLLKSLGINNLLDF 797
Query: 360 LSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGC 419
++ P E + ++ +LY +GA+ ELT LG +A+ P D ++ K ++ +GC
Sbjct: 798 --DFMDAPPPETLMRSLELLYALGALNNRGELTKLGRQMAEFPTDPMLSKSLIASSKYGC 855
Query: 420 LSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMV 478
+ +LSI + L S Y PKD+ ++A+ +N + DHL L+
Sbjct: 856 VEEVLSIVSMLGEASSLFYRPKDKIMEADKAR-------------ANFTQPGGDHLTLLH 902
Query: 479 AYKKW 483
+ +W
Sbjct: 903 IWNEW 907
Score = 151 (58.2 bits), Expect = 8.1e-43, Sum P(3) = 8.1e-43
Identities = 32/81 (39%), Positives = 48/81 (59%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +I+DE HER+L D L ++KD+ A P LKV++ SAT+D+ FS
Sbjct: 527 EPDLASYSVIIIDEAHERTLHTDILFGLVKDI-----ARFRPDLKVLISSATIDAEKFSA 581
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF + PV GR +PV Y+
Sbjct: 582 YFDEAPVFYVPGRRYPVDIYY 602
Score = 58 (25.5 bits), Expect = 8.1e-43, Sum P(3) = 8.1e-43
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 582 EQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVET 641
++ + SN + S V + V+IHPSS ++ K +++ E V T
Sbjct: 960 KKAITAGYFSNAARLDRSGDSYRTV--KSNQTVYIHPSSSVAEKKP---KVIIYFELVLT 1014
Query: 642 NKVFLRDTTIVSP 654
K + R T + P
Sbjct: 1015 TKEYCRQITEIQP 1027
Score = 53 (23.7 bits), Expect = 2.7e-42, Sum P(3) = 2.7e-42
Identities = 26/131 (19%), Positives = 57/131 (43%)
Query: 456 DKLEGLSDSNDSSTQ--SDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIR 513
DK+ + + TQ DHL L+ + +W T + + + FL + R
Sbjct: 878 DKIMEADKARANFTQPGGDHLTLLHIWNEWVD------TDFSYNWARENFLQYKSLCRAR 931
Query: 514 DMRIQFGTLLADIGLINLPNKNQTGGK-KKDDLDSWFSDESQMFNMYANHSSIVKAILCA 572
D+R Q L + + + N +++ KK +FS+ +++ ++ + VK+
Sbjct: 932 DVRDQLANLCERVEIELVTNSSESLDPIKKAITAGYFSNAARLDRSGDSYRT-VKSNQTV 990
Query: 573 GLYPNVAATEQ 583
++P+ + E+
Sbjct: 991 YIHPSSSVAEK 1001
Score = 42 (19.8 bits), Expect = 1.7e-31, Sum P(3) = 1.7e-31
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 91 EDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
ED +ES Y +D +A+ E S S N +K+
Sbjct: 133 EDEWESDEYEEVVDGSASHPIEEDSVSTDFQNHDYEKS 170
>ZFIN|ZDB-GENE-090313-193 [details] [associations]
symbol:tdrd9 "tudor domain containing 9"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0043046 "DNA methylation
involved in gamete generation" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0009566
"fertilization" evidence=ISS] [GO:0007283 "spermatogenesis"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0034587 "piRNA metabolic process" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0031047 "gene silencing by RNA" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 ZFIN:ZDB-GENE-090313-193
GO:GO:0005524 GO:GO:0003676 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00700000104393 GO:GO:0008026 EMBL:BX072537
IPI:IPI00488074 Ensembl:ENSDART00000124958 Bgee:F1RA66
Uniprot:F1RA66
Length = 1344
Score = 387 (141.3 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 98/269 (36%), Positives = 144/269 (53%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKV 251
G++LVFLPG+AEI + + L+ R + LHS+V +Q VFL P RK+
Sbjct: 347 GSVLVFLPGLAEIQYMKEALSKLVR----KRLQVYPLHSTVTLEEQNGVFLVPVPGYRKI 402
Query: 252 IIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVK 311
I++TNIAE+S+T+ DV YV D ++ + + + W S V
Sbjct: 403 ILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVS 462
Query: 312 PGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEA 371
G CY L TRH +E + + +PEM R PL L++KLL +G + LS AL PP
Sbjct: 463 KGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPILGD 522
Query: 372 ITTAISVLYEVGAI--------EGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPI 423
I + L ++GA+ + D +LT LG LA+LPVD+ +GK+++ G +FGCL
Sbjct: 523 IERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEEC 582
Query: 424 LSISAFLSYKSPFIYPKDEKQNVERAKLA 452
L I+A LS KS F P ++ R+KL+
Sbjct: 583 LIIAASLSLKSFFAMPSLQQLAGYRSKLS 611
Score = 150 (57.9 bits), Expect = 1.1e-42, Sum P(2) = 1.1e-42
Identities = 41/107 (38%), Positives = 59/107 (55%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L K LT +H+ +DEVHERS DFLL+V++ LL S + +KVILMSAT++
Sbjct: 196 LVSSKTLTEYSHIFIDEVHERSEELDFLLLVVRKLLRSNSRY----VKVILMSATINCIE 251
Query: 66 FSRYFGDC------P--VITAEGRTHPVTTYFLEDVYESINYRLALD 104
F+ YFG P V EG + V Y+L+++ + + LD
Sbjct: 252 FAEYFGSPIRNQMNPAYVFEVEGAPYAVEEYYLDELKTMLPVGVNLD 298
>DICTYBASE|DDB_G0291183 [details] [associations]
symbol:dhx8 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0006396 "RNA processing" evidence=ISS] [GO:0005681
"spliceosomal complex" evidence=IEA;ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
dictyBase:DDB_G0291183 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GenomeReviews:CM000154_GR GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 EMBL:AAFI02000175
InterPro:IPR022967 SMART:SM00316 KO:K12818 OMA:NAWCYEN
RefSeq:XP_635385.1 HSSP:P05055 ProteinModelPortal:Q54F05
EnsemblProtists:DDB0233399 GeneID:8628033 KEGG:ddi:DDB_G0291183
ProtClustDB:CLSZ2846610 Uniprot:Q54F05
Length = 1160
Score = 375 (137.1 bits), Expect = 1.2e-42, Sum P(3) = 1.2e-42
Identities = 105/319 (32%), Positives = 160/319 (50%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEI----HILLDRLAASYRFGGPSSDWL- 225
D +D L+ + H+ E G+ IL+FL G EI IL +R+ + G D +
Sbjct: 698 DYLDASLITVMQIHLSEPPGD--ILLFLTGQEEIDAACQILYERMKS---LGSNVPDLII 752
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
L ++S++ S Q K+F P RKV+IATNIAETS+TID + YV D G K+ +N +
Sbjct: 753 LPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKN 812
Query: 286 KLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
+ S+V IS PG CY LYT ++ M +PE+QR L
Sbjct: 813 GMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTV 872
Query: 346 LQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDV 405
L +K + + + F ++PP + + +A+ LY +GA++ + LT LG +A+ P+D
Sbjct: 873 LTMKAMGINDLLNF--DFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDP 930
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSN 465
+ KM++ GC IL++ A LS ++ F PK EKQ + K A EG
Sbjct: 931 QLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPK-EKQALADQKKAKFFQP-EG----- 983
Query: 466 DSSTQSDHLVLMVAYKKWQ 484
DHL L+ Y+ W+
Sbjct: 984 ------DHLTLLNVYESWK 996
Score = 146 (56.5 bits), Expect = 1.2e-42, Sum P(3) = 1.2e-42
Identities = 33/89 (37%), Positives = 54/89 (60%)
Query: 4 CYLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDS 63
C L D NL+ + +I+DE HER++ D L +LK L+++ P+LKV++ SAT+++
Sbjct: 613 CLL--DPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRR-----PELKVLITSATLEA 665
Query: 64 NLFSRYFGDCPVITAEGRTHPVTTYFLED 92
FS+YF + + GRT PV + +D
Sbjct: 666 EKFSKYFMNAQLFIIPGRTFPVDIRYTKD 694
Score = 59 (25.8 bits), Expect = 1.2e-42, Sum P(3) = 1.2e-42
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+ DHL L+ Y+ W + +K + +C + F+ + + +D+R Q T++
Sbjct: 982 EGDHLTLLNVYESW------KNSKFSNPWCFENFVQARSLRRAQDVRKQLITIM 1029
>ZFIN|ZDB-GENE-070410-11 [details] [associations]
symbol:zgc:158828 "zgc:158828" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 ZFIN:ZDB-GENE-070410-11
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HOVERGEN:HBG039428 OrthoDB:EOG4V9TQ5
EMBL:BC117646 IPI:IPI00851766 UniGene:Dr.86097 Uniprot:Q1ECW4
Length = 691
Score = 371 (135.7 bits), Expect = 1.6e-42, Sum P(3) = 1.6e-42
Identities = 87/274 (31%), Positives = 146/274 (53%)
Query: 180 DLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSSDWLLALHSSVASV 235
+ V + ET +G +L FL G E+ +L ++ R+G +L +++ +
Sbjct: 253 ETVLKIHETEDDGDVLAFLTGQEEVEKVVSLLQEQARTLSRYGMKKHLCVLPMYAGLPYN 312
Query: 236 DQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWI 295
+Q +VF R +RKV++ATNIAETSITI+ VV+V DC K YN + + S++ I
Sbjct: 313 EQMRVFERMAPTVRKVVVATNIAETSITINGVVFVIDCAFVKIRAYNPRTAIESLIVTPI 372
Query: 296 SXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGR 355
S + G C+ LYT +EKL VPEMQR L + LQ+K L +
Sbjct: 373 SKASACQRAGRAGRNRAGKCFRLYTEEDFEKLPES-TVPEMQRSNLAPVILQLKALGIDN 431
Query: 356 IKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKLPVDVLIGKMMLFG 414
+ F L PP +++ A+ +L+ +G ++ LT P+G +A+ P+ + KM+L
Sbjct: 432 VLRF--SFLSPPPAQSMVQALELLFALGGLDQYGRLTDPMGVRMAEFPLSPMFAKMLLES 489
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKDEKQNVER 448
G FGC I++I+A + ++ F+ P +++++ R
Sbjct: 490 GNFGCSKEIVTIAAMMQIQNIFVAPHNQRKSAAR 523
Score = 119 (46.9 bits), Expect = 1.6e-42, Sum P(3) = 1.6e-42
Identities = 33/94 (35%), Positives = 53/94 (56%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ D L + +I+DE HER+L D + +LK +L+K+ D L++I+ SAT+D+
Sbjct: 151 MMSDPLLKKYSVLILDEAHERTLYTDIAIGLLKKILKKR--RD---LRLIVASATLDAKK 205
Query: 66 FSRYF-----GD-----CPVITAEGRTHPVTTYF 89
F +F GD C ++T EGRT PV ++
Sbjct: 206 FQDFFNLNESGDASKDTCGILTVEGRTFPVDIFY 239
Score = 74 (31.1 bits), Expect = 1.6e-42, Sum P(3) = 1.6e-42
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 612 REVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
RE++IHP S+ L + P ++VF E V+T+K ++RD T V
Sbjct: 624 RELYIHPDSV---LYGEKPPKWVVFNEVVQTSKYYMRDVTAV 662
>CGD|CAL0002409 [details] [associations]
symbol:orf19.5865 species:5476 "Candida albicans" [GO:0071006
"U2-type catalytic step 1 spliceosome" evidence=IEA] [GO:0000349
"generation of catalytic spliceosome for first transesterification
step" evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
CGD:CAL0002409 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003 EMBL:AACQ01000004
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12814 RefSeq:XP_722935.1 RefSeq:XP_723081.1 GeneID:3635187
GeneID:3635307 KEGG:cal:CaO19.13287 KEGG:cal:CaO19.5865
Uniprot:Q5ANN5
Length = 865
Score = 352 (129.0 bits), Expect = 1.8e-42, Sum P(4) = 1.8e-42
Identities = 98/295 (33%), Positives = 153/295 (51%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLL--ALHSSVASVDQKKVFLRPPEKIR 249
G ILVFL G EI + + L S G D ++ ++++++ Q+K+F P R
Sbjct: 443 GDILVFLTGQDEIETMEEILRDSILKLGDQIDPMIVCSIYANLPQELQQKIFQPTPSNTR 502
Query: 250 KVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXX 309
K+++ATNIAETSITID + YV D G K+N YN + S+V S
Sbjct: 503 KIVLATNIAETSITIDGISYVIDPGYVKQNVYNPTTGMESLVVVPCSRASADQRAGRAGR 562
Query: 310 VKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKE 369
V PG C+ L+T+ + + Q PE+QR+ L + L LLSLG + + ++PP +
Sbjct: 563 VGPGKCFRLFTKWSFYNELDSNQQPEIQRVNLTSVILL--LLSLGINDLLGFEFMDPPSK 620
Query: 370 EAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAF 429
EAI A+++LY +GA+ +LT G +++ P+D + K +L F I+SI A
Sbjct: 621 EAIIKALNLLYALGALNTQGKLTKTGKKMSEFPLDPVFTKCILTSDKFDNTKQIISIIAM 680
Query: 430 LSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKW 483
L+ S Y PKD+K+ L DK + + ND Q D +L+ +++W
Sbjct: 681 LNESSNLFYRPKDKKE---------LADKRK--QEFND--LQGDQFMLLKIWQQW 722
Score = 143 (55.4 bits), Expect = 1.8e-42, Sum P(4) = 1.8e-42
Identities = 30/85 (35%), Positives = 52/85 (61%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D L + +++DE HER+L + LL +LKD++ D LK+I+ SAT+++
Sbjct: 336 FLQ-DPTLGKYSAIMIDEAHERTLSTEILLSLLKDVMMTTRKDD---LKIIIASATINAE 391
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
FS++F + P++ GR PV ++
Sbjct: 392 KFSQFFNNAPILNIPGRRFPVKIHY 416
Score = 60 (26.2 bits), Expect = 1.8e-42, Sum P(4) = 1.8e-42
Identities = 33/153 (21%), Positives = 66/153 (43%)
Query: 454 LTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIR 513
L DK + + ND Q D +L+ +++W + G Q+C YF+ M I+
Sbjct: 697 LADKRK--QEFND--LQGDQFMLLKIWQQW----VDSGYSV--QWCQDYFIQYKTMKRIK 746
Query: 514 DMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAG 573
++ Q L IG I + +++Q +++ D N++ + K ++ +G
Sbjct: 747 NIYEQLIRLSKKIG-IEVNSRHQHRDHLQENTD--------------NNTLLTKCLI-SG 790
Query: 574 LYPNVAA-TEQGVAGAALSNLRKSSNSAAKAHP 605
+ N+ + G L+N + +N+ HP
Sbjct: 791 FFNNIVKLSPMGDCYQKLTNGKGGNNTPCYIHP 823
Score = 58 (25.5 bits), Expect = 1.8e-42, Sum P(4) = 1.8e-42
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 615 HIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
+IHPSS +LK + +L++ E V T+K ++R+ I+
Sbjct: 820 YIHPSSCIYKLKP-KPKYLLYYELVLTSKEYMRNCIIL 856
>UNIPROTKB|H7C5F5 [details] [associations]
symbol:DHX36 "Probable ATP-dependent RNA helicase DHX36"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 EMBL:AC018452 EMBL:AC134026 HGNC:HGNC:14410
ProteinModelPortal:H7C5F5 Ensembl:ENST00000469977 Uniprot:H7C5F5
Length = 188
Score = 300 (110.7 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 61/124 (49%), Positives = 81/124 (65%)
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
+ LHS + +V+Q +VF R P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q
Sbjct: 2 IPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQN 61
Query: 286 KLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
+S+M +W+S V+PG CY LY R L+ YQ+PE+ R PL ELC
Sbjct: 62 NISTMSAEWVSKANAKQRKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEELC 120
Query: 346 LQIK 349
LQIK
Sbjct: 121 LQIK 124
Score = 184 (69.8 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
Identities = 34/56 (60%), Positives = 45/56 (80%)
Query: 384 AIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYP 439
A++ EELTPLG HLA+LPV+ IGKM+LFG +F CL P+L+I+A LS+K PF+ P
Sbjct: 126 ALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIP 181
>FB|FBgn0086895 [details] [associations]
symbol:pea "peanuts" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IC] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0071011 "precatalytic
spliceosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0007286 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0000381 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN EMBL:BT044222
RefSeq:NP_610928.1 UniGene:Dm.12451 SMR:A1Z9L3 STRING:A1Z9L3
EnsemblMetazoa:FBtr0087518 GeneID:36561 KEGG:dme:Dmel_CG8241
UCSC:CG8241-RA CTD:36561 FlyBase:FBgn0086895 InParanoid:A1Z9L3
OrthoDB:EOG437PVS GenomeRNAi:36561 NextBio:799212 Uniprot:A1Z9L3
Length = 1242
Score = 373 (136.4 bits), Expect = 1.8e-42, Sum P(3) = 1.8e-42
Identities = 102/321 (31%), Positives = 157/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ IL+FL G EI + L + GP L
Sbjct: 771 KEPETDYLDASLITVMQIHLREPPGD--ILLFLTGQEEIDTACEILYERMKSLGPDVPEL 828
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 829 IILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAETSLTIDGIFYVVDPGFVKQKVYNS 888
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + S+V IS PG Y LYT Y M P VPE+QR L
Sbjct: 889 KTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTERAYRDEMLPTPVPEIQRTNLAT 948
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
LQ+K + + + F ++ P E++ A+ L+ + A++ + LT LG +A+ P+
Sbjct: 949 TVLQLKTMGINDLLHF--DFMDAPPVESLVMALEQLHSLSALDDEGLLTRLGRRMAEFPL 1006
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ + KM++ C IL+I + LS ++ F PKD++ ++ K ++ EG
Sbjct: 1007 EPNLSKMLIMSVALQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKF--NQAEG--- 1061
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
DHL L+ Y W+
Sbjct: 1062 --------DHLTLLAVYNSWK 1074
Score = 140 (54.3 bits), Expect = 1.8e-42, Sum P(3) = 1.8e-42
Identities = 31/89 (34%), Positives = 54/89 (60%)
Query: 4 CYLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDS 63
C ++ + L + +++DE HER++ D L +LK ++K+ P+LK+I+ SAT+D+
Sbjct: 691 CLMEAE--LKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKR-----PELKLIVTSATLDA 743
Query: 64 NLFSRYFGDCPVITAEGRTHPVTTYFLED 92
FS+YF P+ T GRT PV + ++
Sbjct: 744 VKFSQYFFKAPIFTIPGRTFPVEVLYTKE 772
Score = 67 (28.6 bits), Expect = 1.8e-42, Sum P(3) = 1.8e-42
Identities = 16/50 (32%), Positives = 30/50 (60%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGS 663
V+IHPSS L + + ++++ E V+T K ++R+ T + P ++ F S
Sbjct: 1154 VYIHPSSA---LFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEFAPS 1200
>UNIPROTKB|F1P306 [details] [associations]
symbol:LOC100858239 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967
SMART:SM00316 GeneTree:ENSGT00700000104241 EMBL:AADN02070153
EMBL:AADN02070154 IPI:IPI00591627 Ensembl:ENSGALT00000001801
OMA:AMANTAM Uniprot:F1P306
Length = 1168
Score = 392 (143.0 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 106/321 (33%), Positives = 156/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 698 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 755
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 756 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 815
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 816 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 875
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 876 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 933
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD K AL K
Sbjct: 934 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD--------KQALADQK-----K 980
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ T+ DHL L+ Y W+
Sbjct: 981 AKFHQTEGDHLTLLAVYNSWK 1001
Score = 140 (54.3 bits), Expect = 2.0e-42, Sum P(2) = 2.0e-42
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 621 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 675
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 676 YFYEAPIFTIPGRTYPVEILYTKE 699
Score = 43 (20.2 bits), Expect = 3.1e-32, Sum P(2) = 3.1e-32
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
++E++ + +LK L+ A D+ + G+ T G+T +T Y E Y S
Sbjct: 506 IIEQRESLPIFRLKEQLIQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGYTS 557
>UNIPROTKB|F5H658 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
HGNC:HGNC:2749 EMBL:AC068675 EMBL:AC087650 IPI:IPI01010550
ProteinModelPortal:F5H658 SMR:F5H658 Ensembl:ENST00000540306
UCSC:uc010wig.2 ArrayExpress:F5H658 Bgee:F5H658 Uniprot:F5H658
Length = 1181
Score = 392 (143.0 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 106/321 (33%), Positives = 156/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 750 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 807
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 808 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 867
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 868 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 927
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 928 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 985
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD K AL K
Sbjct: 986 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD--------KQALADQK-----K 1032
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ T+ DHL L+ Y W+
Sbjct: 1033 AKFHQTEGDHLTLLAVYNSWK 1053
Score = 140 (54.3 bits), Expect = 2.1e-42, Sum P(2) = 2.1e-42
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 727
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 728 YFYEAPIFTIPGRTYPVEILYTKE 751
Score = 49 (22.3 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
+LE++ + KLK L+ A D+ + G+ T G+T +T Y E Y S
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGYTS 609
>RGD|1310723 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310723
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241 KO:K12818 CTD:1659
OrthoDB:EOG4D26P2 UniGene:Rn.108087 EMBL:AY383690 IPI:IPI00370026
RefSeq:NP_001041309.1 SMR:Q6TXG4 Ensembl:ENSRNOT00000048140
GeneID:287727 KEGG:rno:287727 UCSC:RGD:1310723 NextBio:626887
Genevestigator:Q6TXG4 Uniprot:Q6TXG4
Length = 1210
Score = 392 (143.0 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 106/321 (33%), Positives = 156/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 719 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 776
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 777 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 836
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 837 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 896
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 897 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 954
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD K AL K
Sbjct: 955 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD--------KQALADQK-----K 1001
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ T+ DHL L+ Y W+
Sbjct: 1002 AKFHQTEGDHLTLLAVYNSWK 1022
Score = 140 (54.3 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 642 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 696
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 697 YFYEAPIFTIPGRTYPVEILYTKE 720
Score = 49 (22.3 bits), Expect = 8.2e-33, Sum P(2) = 8.2e-33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
+LE++ + KLK L+ A D+ + G+ T G+T +T Y E Y S
Sbjct: 527 ILEQRESLPIYKLKEQLVQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGYTS 578
>UNIPROTKB|F1S1H3 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:FP102477 RefSeq:XP_003131427.2
Ensembl:ENSSSCT00000018917 GeneID:100517118 KEGG:ssc:100517118
Uniprot:F1S1H3
Length = 1212
Score = 392 (143.0 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 106/321 (33%), Positives = 156/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 742 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 799
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 800 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 859
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 860 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 919
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 920 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 977
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD K AL K
Sbjct: 978 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD--------KQALADQK-----K 1024
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ T+ DHL L+ Y W+
Sbjct: 1025 AKFHQTEGDHLTLLAVYNSWK 1045
Score = 140 (54.3 bits), Expect = 2.3e-42, Sum P(2) = 2.3e-42
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 665 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 719
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 720 YFYEAPIFTIPGRTYPVEILYTKE 743
Score = 47 (21.6 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
++E++ + KLK L+ A D+ + G+ T G+T +T Y E Y S
Sbjct: 550 IIEQRESLPIYKLKEQLVQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGYTS 601
>UNIPROTKB|E2R9R9 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
KO:K12818 OMA:NAWCYEN CTD:1659 EMBL:AAEX03006434 EMBL:AAEX03006433
RefSeq:XP_537627.2 ProteinModelPortal:E2R9R9
Ensembl:ENSCAFT00000023129 GeneID:480507 KEGG:cfa:480507
Uniprot:E2R9R9
Length = 1216
Score = 392 (143.0 bits), Expect = 2.4e-42, Sum P(2) = 2.4e-42
Identities = 106/321 (33%), Positives = 156/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 746 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 803
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 804 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 863
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 864 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 923
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 924 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 981
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD K AL K
Sbjct: 982 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD--------KQALADQK-----K 1028
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ T+ DHL L+ Y W+
Sbjct: 1029 AKFHQTEGDHLTLLAVYNSWK 1049
Score = 140 (54.3 bits), Expect = 2.4e-42, Sum P(2) = 2.4e-42
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 669 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 723
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 724 YFYEAPIFTIPGRTYPVEILYTKE 747
Score = 47 (21.6 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
++E++ + KLK L+ A D+ + G+ T G+T +T Y E Y S
Sbjct: 554 IIEQRESLPIYKLKEQLVQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGYTS 605
>UNIPROTKB|Q14562 [details] [associations]
symbol:DHX8 "ATP-dependent RNA helicase DHX8" species:9606
"Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005681 "spliceosomal complex" evidence=TAS]
[GO:0008380 "RNA splicing" evidence=TAS] [GO:0006396 "RNA
processing" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 EMBL:D50487 GO:GO:0005524 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316
HOVERGEN:HBG039428 KO:K12818 OMA:NAWCYEN IPI:IPI00031508 PIR:A56236
RefSeq:NP_004932.1 UniGene:Hs.463105 PDB:2EQS PDB:3I4U PDBsum:2EQS
PDBsum:3I4U ProteinModelPortal:Q14562 SMR:Q14562 IntAct:Q14562
STRING:Q14562 PhosphoSite:Q14562 DMDM:3023637 PaxDb:Q14562
PeptideAtlas:Q14562 PRIDE:Q14562 Ensembl:ENST00000262415
GeneID:1659 KEGG:hsa:1659 UCSC:uc002idu.1 CTD:1659
GeneCards:GC17P041572 HGNC:HGNC:2749 HPA:HPA049285 MIM:600396
neXtProt:NX_Q14562 PharmGKB:PA27231 InParanoid:Q14562
OrthoDB:EOG4D26P2 PhylomeDB:Q14562 EvolutionaryTrace:Q14562
GenomeRNAi:1659 NextBio:6828 ArrayExpress:Q14562 Bgee:Q14562
CleanEx:HS_DHX8 Genevestigator:Q14562 GermOnline:ENSG00000067596
Uniprot:Q14562
Length = 1220
Score = 392 (143.0 bits), Expect = 2.4e-42, Sum P(2) = 2.4e-42
Identities = 106/321 (33%), Positives = 156/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 750 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 807
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 808 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 867
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 868 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 927
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 928 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 985
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD K AL K
Sbjct: 986 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD--------KQALADQK-----K 1032
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ T+ DHL L+ Y W+
Sbjct: 1033 AKFHQTEGDHLTLLAVYNSWK 1053
Score = 140 (54.3 bits), Expect = 2.4e-42, Sum P(2) = 2.4e-42
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 727
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 728 YFYEAPIFTIPGRTYPVEILYTKE 751
Score = 49 (22.3 bits), Expect = 8.5e-33, Sum P(2) = 8.5e-33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
+LE++ + KLK L+ A D+ + G+ T G+T +T Y E Y S
Sbjct: 558 ILEQRESLPIYKLKEQLVQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGYTS 609
>UNIPROTKB|F1MEM4 [details] [associations]
symbol:DHX8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
InterPro:IPR022967 SMART:SM00316 GeneTree:ENSGT00700000104241
OMA:NAWCYEN EMBL:DAAA02049231 EMBL:DAAA02049230 IPI:IPI00695401
Ensembl:ENSBTAT00000010976 Uniprot:F1MEM4
Length = 1230
Score = 392 (143.0 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 106/321 (33%), Positives = 156/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 760 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 817
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 818 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 877
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 878 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 937
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 938 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 995
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD K AL K
Sbjct: 996 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD--------KQALADQK-----K 1042
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ T+ DHL L+ Y W+
Sbjct: 1043 AKFHQTEGDHLTLLAVYNSWK 1063
Score = 140 (54.3 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 683 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 737
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 738 YFYEAPIFTIPGRTYPVEILYTKE 761
Score = 47 (21.6 bits), Expect = 1.4e-32, Sum P(2) = 1.4e-32
Identities = 16/57 (28%), Positives = 27/57 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
++E++ + KLK L+ A D+ + G+ T G+T +T Y E Y S
Sbjct: 568 IIEQRESLPIYKLKEQLVQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGYTS 619
>UNIPROTKB|D4A805 [details] [associations]
symbol:Dhx8 "Protein Dhx8" species:10116 "Rattus
norvegicus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1310723 GO:GO:0005524 GO:GO:0003723 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 EMBL:CH473948 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
OMA:NAWCYEN IPI:IPI00567810 UniGene:Rn.108087
Ensembl:ENSRNOT00000028198 Uniprot:D4A805
Length = 1242
Score = 392 (143.0 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 106/321 (33%), Positives = 156/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 772 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 829
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 830 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 889
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 890 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 949
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 950 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 1007
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD K AL K
Sbjct: 1008 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD--------KQALADQK-----K 1054
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ T+ DHL L+ Y W+
Sbjct: 1055 AKFHQTEGDHLTLLAVYNSWK 1075
Score = 140 (54.3 bits), Expect = 2.5e-42, Sum P(2) = 2.5e-42
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 695 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 749
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 750 YFYEAPIFTIPGRTYPVEILYTKE 773
Score = 49 (22.3 bits), Expect = 9.0e-33, Sum P(2) = 9.0e-33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
+LE++ + KLK L+ A D+ + G+ T G+T +T Y E Y S
Sbjct: 580 ILEQRESLPIYKLKEQLVQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGYTS 631
>MGI|MGI:1306823 [details] [associations]
symbol:Dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005681 "spliceosomal
complex" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
MGI:MGI:1306823 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AL590994 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 InterPro:IPR022967 SMART:SM00316 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
OrthoDB:EOG4D26P2 EMBL:BC132445 EMBL:AL591436 IPI:IPI00461304
RefSeq:NP_659080.2 UniGene:Mm.28186 ProteinModelPortal:A2A4P0
SMR:A2A4P0 PaxDb:A2A4P0 PRIDE:A2A4P0 DNASU:217207
Ensembl:ENSMUST00000039152 GeneID:217207 KEGG:mmu:217207
UCSC:uc007lpr.1 InParanoid:A2A4P0 NextBio:375641 Bgee:A2A4P0
Genevestigator:A2A4P0 Uniprot:A2A4P0
Length = 1244
Score = 392 (143.0 bits), Expect = 2.6e-42, Sum P(2) = 2.6e-42
Identities = 106/321 (33%), Positives = 156/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 774 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 831
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 832 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 891
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 892 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 951
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 952 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 1009
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD K AL K
Sbjct: 1010 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKD--------KQALADQK-----K 1056
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ T+ DHL L+ Y W+
Sbjct: 1057 AKFHQTEGDHLTLLAVYNSWK 1077
Score = 140 (54.3 bits), Expect = 2.6e-42, Sum P(2) = 2.6e-42
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 697 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 751
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 752 YFYEAPIFTIPGRTYPVEILYTKE 775
Score = 49 (22.3 bits), Expect = 9.1e-33, Sum P(2) = 9.1e-33
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
+LE++ + KLK L+ A D+ + G+ T G+T +T Y E Y S
Sbjct: 582 ILEQRESLPIYKLKEQLVQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGYTS 633
>DICTYBASE|DDB_G0285213 [details] [associations]
symbol:dhx15 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285213 GO:GO:0005524
GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397 GO:GO:0005681
GO:GO:0003676 EMBL:AAFI02000076 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 KO:K12820 OMA:TVLQIHA RefSeq:XP_638323.1
ProteinModelPortal:Q54NJ4 EnsemblProtists:DDB0233403 GeneID:8624993
KEGG:ddi:DDB_G0285213 Uniprot:Q54NJ4
Length = 727
Score = 368 (134.6 bits), Expect = 2.6e-42, Sum P(2) = 2.6e-42
Identities = 97/302 (32%), Positives = 155/302 (51%)
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLR 243
H +E G G ILVFL G EI ++ R G L L+SS+ Q K+F
Sbjct: 281 HTNE--GTGDILVFLTGEEEIEDTCAKIQRETRERGLPPMKTLPLYSSLPIYQQSKIFDT 338
Query: 244 PPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXX 303
E RK I++TNIAETS+TID +V+V D G K+ YN + ++ S++ IS
Sbjct: 339 CKE--RKCIVSTNIAETSLTIDGIVFVVDPGFSKQKTYNPRSRVESLLVAPISKASANQR 396
Query: 304 XXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKA 363
+PG C+ LYT +++LM PE+ R L + LQ LL LG + +
Sbjct: 397 AGRAGRTRPGKCFRLYTEKAFKELMIQQTHPEILRSNLASVVLQ--LLKLGVVDLVHFDF 454
Query: 364 LEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPI 423
++PP + + A+ VL+ +GA++ + +LT +G +++ P+D + KM++ C + I
Sbjct: 455 MDPPVPDTLIRALEVLHYLGALDDEGQLTEIGSIMSEFPLDPQLSKMLIVSAERSCSNEI 514
Query: 424 LSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKW 483
L+I+A LS + F+ PKD + + AK + D +G DHL ++ Y +
Sbjct: 515 LTIAAMLSAPNCFMRPKDNRIEADSAKKSF--DHFDG-----------DHLTMLNVYHSF 561
Query: 484 QK 485
+K
Sbjct: 562 KK 563
Score = 156 (60.0 bits), Expect = 2.6e-42, Sum P(2) = 2.6e-42
Identities = 32/84 (38%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L +I+DE HER+L D L ++KD+L+++ LK+I+MSAT+++ F +
Sbjct: 186 DPTLNKYDVIILDEAHERTLSTDILFGLIKDILKRRK-----DLKLIVMSATLEAGKFQK 240
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+I GR HPV ++ E+
Sbjct: 241 YFENAPLIKVPGRLHPVEIFYTEE 264
Score = 38 (18.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 10/36 (27%), Positives = 18/36 (50%)
Query: 431 SYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
SY +PK K+ ++RA+ L + G S ++
Sbjct: 691 SYFKQKSFPKKTKETIQRAQ-RLYSGSSSGSSSGSN 725
>UNIPROTKB|E1BYA5 [details] [associations]
symbol:DHX33 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000182 "rDNA binding"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0045943 "positive regulation of
transcription from RNA polymerase I promoter" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AADN02025994
IPI:IPI00823199 Ensembl:ENSGALT00000002492 ArrayExpress:E1BYA5
Uniprot:E1BYA5
Length = 660
Score = 341 (125.1 bits), Expect = 3.8e-42, Sum P(3) = 3.8e-42
Identities = 110/398 (27%), Positives = 179/398 (44%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLD--RLAASYRFGGPSSD 223
K+ D + L+ H + + ILVFL G EI + R A + G
Sbjct: 214 KQPQSDYLQAALVSVFQIHQEAPSSQD-ILVFLTGQEEIEAMTKTCRDIAKHLPDGCPQM 272
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
++ L++S+ Q +VF P+ RKVI++TNIAETSITI + YV D G K +YN
Sbjct: 273 TVMPLYASLPYSQQLRVFQAAPKGCRKVILSTNIAETSITISGIKYVVDTGMVKAKKYNP 332
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQ---RMP 340
+ L + +S GICY LYT +EK + VPE+Q R
Sbjct: 333 EIGLEVLAVQRVSKAQAWQRTGRAGREDSGICYRLYTEDEFEKFDK-MTVPEIQSLCRCN 391
Query: 341 LVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE---LTPLGHH 397
L + LQ+ L + I F + P +AI AI L +GA+E E+ LTPLG
Sbjct: 392 LASVLLQLLALRIPNILTF--DFMSKPSPDAIQAAIEQLDLLGAVEQKEDQLVLTPLGRK 449
Query: 398 LAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDK 457
+A P++ K +L F C IL+I + LS S P + V+ + +
Sbjct: 450 MAAFPLEPKFSKTILLSPKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFI--- 506
Query: 458 LEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRI 517
S++ DHL L+ Y+ ++ + G K ++C + F++ M ++ D+R
Sbjct: 507 ----------SSEGDHLTLLNVYRAFKNV---SGNK---EWCKENFVNGRNMMLVSDVRA 550
Query: 518 QFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQM 555
Q + + + +++ T ++ S F + +++
Sbjct: 551 QLRDICVKLSMPMESSRSDTANIRRCLAHSLFMNAAEL 588
Score = 170 (64.9 bits), Expect = 3.8e-42, Sum P(3) = 3.8e-42
Identities = 43/108 (39%), Positives = 61/108 (56%)
Query: 8 GDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFS 67
GD L + VI+DE HER++ D L V+K +K+ LKVI+MSAT+D + FS
Sbjct: 131 GDPILRKYSVVILDEAHERTIHTDVLFGVVKAAQKKRKELGKLPLKVIVMSATMDVDQFS 190
Query: 68 RYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASS 115
+YF PV+ EGR HP+ ++ + +S + AL S I EA S
Sbjct: 191 QYFNGAPVLYLEGRQHPIQVFYTKQP-QSDYLQAALVSVFQIHQEAPS 237
Score = 52 (23.4 bits), Expect = 3.8e-42, Sum P(3) = 3.8e-42
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
V IHPSS+ K +V+ + TNK ++RD +V
Sbjct: 603 VAIHPSSVLFHCKP---SCVVYNGLLHTNKCYMRDLCVV 638
>UNIPROTKB|A5D7D9 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
GeneTree:ENSGT00650000093246 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689
EMBL:DAAA02017121 EMBL:BC140520 IPI:IPI00709068
RefSeq:NP_001091487.1 UniGene:Bt.58909 Ensembl:ENSBTAT00000011714
GeneID:512327 KEGG:bta:512327 InParanoid:A5D7D9 NextBio:20870343
Uniprot:A5D7D9
Length = 795
Score = 354 (129.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 88/269 (32%), Positives = 142/269 (52%)
Query: 191 EGAILVFLPGVAEIHILLDRLAASYRFGGPS-SDW-LLALHSSVASVDQKKVFLRPPEKI 248
EG +L+FL G EI R+ GP D ++ L+S++ Q+++F PP K
Sbjct: 349 EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 408
Query: 249 ------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RKV+++TNIAETS+TID VV+V D G K+ YN + ++ S++ IS
Sbjct: 409 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 468
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
+PG C+ LYT Y+ M+ PE+ R L + LQ+K L + + F
Sbjct: 469 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--D 526
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP E + A+ +L + A+ D +LT LG +A+ P+D + KM++ + C +
Sbjct: 527 FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE 586
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKL 451
+LSI+A LS F+ P + K+ + AK+
Sbjct: 587 VLSITAMLSVPQCFVRPTEAKKAADEAKM 615
Score = 171 (65.3 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ VLK+++ ++S LKVI+MSAT+D+ F YF +CP++T
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQRS-----DLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 78 AEGRTHPVTTYF 89
GRTHPV ++
Sbjct: 312 IPGRTHPVEIFY 323
>UNIPROTKB|E2R2U3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
CTD:1665 GO:GO:0005689 EMBL:AAEX03002593 EMBL:AAEX03002594
RefSeq:XP_851535.1 Ensembl:ENSCAFT00000026155 GeneID:488856
KEGG:cfa:488856 NextBio:20862139 Uniprot:E2R2U3
Length = 795
Score = 354 (129.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 88/269 (32%), Positives = 142/269 (52%)
Query: 191 EGAILVFLPGVAEIHILLDRLAASYRFGGPS-SDW-LLALHSSVASVDQKKVFLRPPEKI 248
EG +L+FL G EI R+ GP D ++ L+S++ Q+++F PP K
Sbjct: 349 EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 408
Query: 249 ------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RKV+++TNIAETS+TID VV+V D G K+ YN + ++ S++ IS
Sbjct: 409 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 468
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
+PG C+ LYT Y+ M+ PE+ R L + LQ+K L + + F
Sbjct: 469 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--D 526
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP E + A+ +L + A+ D +LT LG +A+ P+D + KM++ + C +
Sbjct: 527 FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE 586
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKL 451
+LSI+A LS F+ P + K+ + AK+
Sbjct: 587 VLSITAMLSVPQCFVRPTEAKKAADEAKM 615
Score = 171 (65.3 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ VLK+++ ++S LKVI+MSAT+D+ F YF +CP++T
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQRS-----DLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 78 AEGRTHPVTTYF 89
GRTHPV ++
Sbjct: 312 IPGRTHPVEIFY 323
>UNIPROTKB|O43143 [details] [associations]
symbol:DHX15 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase DHX15" species:9606 "Homo sapiens"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=TAS] [GO:0008380 "RNA splicing" evidence=IC]
[GO:0005689 "U12-type spliceosomal complex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 EMBL:AB001636 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0003724
KO:K12820 OMA:TVLQIHA EMBL:AF279891 EMBL:BC035974 IPI:IPI00396435
PIR:JC5785 RefSeq:NP_001349.2 UniGene:Hs.696074
ProteinModelPortal:O43143 SMR:O43143 DIP:DIP-38211N IntAct:O43143
MINT:MINT-5003827 STRING:O43143 PhosphoSite:O43143
SWISS-2DPAGE:O43143 PaxDb:O43143 PRIDE:O43143
Ensembl:ENST00000336812 GeneID:1665 KEGG:hsa:1665 UCSC:uc003gqx.3
CTD:1665 GeneCards:GC04M024519 HGNC:HGNC:2738 HPA:HPA047047
MIM:603403 neXtProt:NX_O43143 PharmGKB:PA27204 HOVERGEN:HBG039428
InParanoid:O43143 OrthoDB:EOG4K6G3N GenomeRNAi:1665 NextBio:6852
ArrayExpress:O43143 Bgee:O43143 CleanEx:HS_DHX15
Genevestigator:O43143 GermOnline:ENSG00000109606 GO:GO:0005689
Uniprot:O43143
Length = 795
Score = 354 (129.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 88/269 (32%), Positives = 142/269 (52%)
Query: 191 EGAILVFLPGVAEIHILLDRLAASYRFGGPS-SDW-LLALHSSVASVDQKKVFLRPPEKI 248
EG +L+FL G EI R+ GP D ++ L+S++ Q+++F PP K
Sbjct: 349 EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 408
Query: 249 ------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RKV+++TNIAETS+TID VV+V D G K+ YN + ++ S++ IS
Sbjct: 409 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 468
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
+PG C+ LYT Y+ M+ PE+ R L + LQ+K L + + F
Sbjct: 469 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--D 526
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP E + A+ +L + A+ D +LT LG +A+ P+D + KM++ + C +
Sbjct: 527 FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE 586
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKL 451
+LSI+A LS F+ P + K+ + AK+
Sbjct: 587 VLSITAMLSVPQCFVRPTEAKKAADEAKM 615
Score = 171 (65.3 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ VLK+++ ++S LKVI+MSAT+D+ F YF +CP++T
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQRS-----DLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 78 AEGRTHPVTTYF 89
GRTHPV ++
Sbjct: 312 IPGRTHPVEIFY 323
>UNIPROTKB|F1S5A8 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005689 "U12-type spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00650000093246 OMA:TVLQIHA GO:GO:0005689
EMBL:CU633303 Ensembl:ENSSSCT00000009580 Uniprot:F1S5A8
Length = 795
Score = 354 (129.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 88/269 (32%), Positives = 142/269 (52%)
Query: 191 EGAILVFLPGVAEIHILLDRLAASYRFGGPS-SDW-LLALHSSVASVDQKKVFLRPPEKI 248
EG +L+FL G EI R+ GP D ++ L+S++ Q+++F PP K
Sbjct: 349 EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 408
Query: 249 ------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RKV+++TNIAETS+TID VV+V D G K+ YN + ++ S++ IS
Sbjct: 409 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 468
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
+PG C+ LYT Y+ M+ PE+ R L + LQ+K L + + F
Sbjct: 469 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--D 526
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP E + A+ +L + A+ D +LT LG +A+ P+D + KM++ + C +
Sbjct: 527 FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE 586
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKL 451
+LSI+A LS F+ P + K+ + AK+
Sbjct: 587 VLSITAMLSVPQCFVRPTEAKKAADEAKM 615
Score = 171 (65.3 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ VLK+++ ++S LKVI+MSAT+D+ F YF +CP++T
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQRS-----DLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 78 AEGRTHPVTTYF 89
GRTHPV ++
Sbjct: 312 IPGRTHPVEIFY 323
>MGI|MGI:1099786 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005689 "U12-type spliceosomal complex" evidence=ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
MGI:MGI:1099786 GO:GO:0005524 GO:GO:0005730 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820 OMA:TVLQIHA CTD:1665
HOVERGEN:HBG039428 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:AF017153
EMBL:BC003745 IPI:IPI00128818 RefSeq:NP_031865.2 UniGene:Mm.993
ProteinModelPortal:O35286 SMR:O35286 STRING:O35286
PhosphoSite:O35286 PaxDb:O35286 PRIDE:O35286
Ensembl:ENSMUST00000031061 GeneID:13204 KEGG:mmu:13204
InParanoid:O35286 NextBio:283358 Bgee:O35286 CleanEx:MM_DHX15
Genevestigator:O35286 GermOnline:ENSMUSG00000029169 Uniprot:O35286
Length = 795
Score = 354 (129.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 88/269 (32%), Positives = 142/269 (52%)
Query: 191 EGAILVFLPGVAEIHILLDRLAASYRFGGPS-SDW-LLALHSSVASVDQKKVFLRPPEKI 248
EG +L+FL G EI R+ GP D ++ L+S++ Q+++F PP K
Sbjct: 349 EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 408
Query: 249 ------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RKV+++TNIAETS+TID VV+V D G K+ YN + ++ S++ IS
Sbjct: 409 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 468
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
+PG C+ LYT Y+ M+ PE+ R L + LQ+K L + + F
Sbjct: 469 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--D 526
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP E + A+ +L + A+ D +LT LG +A+ P+D + KM++ + C +
Sbjct: 527 FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE 586
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKL 451
+LSI+A LS F+ P + K+ + AK+
Sbjct: 587 VLSITAMLSVPQCFVRPTEAKKAADEAKM 615
Score = 171 (65.3 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ VLK+++ ++S LKVI+MSAT+D+ F YF +CP++T
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQRS-----DLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 78 AEGRTHPVTTYF 89
GRTHPV ++
Sbjct: 312 IPGRTHPVEIFY 323
>RGD|1308072 [details] [associations]
symbol:Dhx15 "DEAH (Asp-Glu-Ala-His) box polypeptide 15"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005689 "U12-type
spliceosomal complex" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 RGD:1308072 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 OrthoDB:EOG4K6G3N GO:GO:0005689 EMBL:CH473963
IPI:IPI00361832 RefSeq:NP_001178526.1 UniGene:Rn.55597
Ensembl:ENSRNOT00000005126 GeneID:289693 KEGG:rno:289693
NextBio:630162 Uniprot:D3ZD97
Length = 795
Score = 354 (129.7 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 88/269 (32%), Positives = 142/269 (52%)
Query: 191 EGAILVFLPGVAEIHILLDRLAASYRFGGPS-SDW-LLALHSSVASVDQKKVFLRPPEKI 248
EG +L+FL G EI R+ GP D ++ L+S++ Q+++F PP K
Sbjct: 349 EGDLLLFLTGQEEIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 408
Query: 249 ------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RKV+++TNIAETS+TID VV+V D G K+ YN + ++ S++ IS
Sbjct: 409 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 468
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
+PG C+ LYT Y+ M+ PE+ R L + LQ+K L + + F
Sbjct: 469 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--D 526
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP E + A+ +L + A+ D +LT LG +A+ P+D + KM++ + C +
Sbjct: 527 FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE 586
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKL 451
+LSI+A LS F+ P + K+ + AK+
Sbjct: 587 VLSITAMLSVPQCFVRPTEAKKAADEAKM 615
Score = 171 (65.3 bits), Expect = 4.6e-42, Sum P(2) = 4.6e-42
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ VLK+++ ++S LKVI+MSAT+D+ F YF +CP++T
Sbjct: 257 IILDEAHERTLATDILMGVLKEVVRQRS-----DLKVIVMSATLDAGKFQIYFDNCPLLT 311
Query: 78 AEGRTHPVTTYF 89
GRTHPV ++
Sbjct: 312 IPGRTHPVEIFY 323
>ZFIN|ZDB-GENE-030131-650 [details] [associations]
symbol:dhx15 "DEAH (Asp-Glu-Ala-His) box
polypeptide 15" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-030131-650 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA CTD:1665 EMBL:CU651678 IPI:IPI00481686
RefSeq:NP_001108613.1 UniGene:Dr.4024 Ensembl:ENSDART00000081245
GeneID:321931 KEGG:dre:321931 NextBio:20807587 Uniprot:E7F3I8
Length = 769
Score = 352 (129.0 bits), Expect = 6.5e-42, Sum P(2) = 6.5e-42
Identities = 87/269 (32%), Positives = 142/269 (52%)
Query: 191 EGAILVFLPGVAEIHILLDRLAASYRFGGPS-SDW-LLALHSSVASVDQKKVFLRPPEKI 248
EG +L+FL G EI R+ GP D ++ L+S++ Q+++F PP +
Sbjct: 323 EGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIPLYSTLPPQQQQRIFEPPPPRK 382
Query: 249 ------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RKV+++TNIAETS+TID VV+V D G K+ YN + ++ S++ IS
Sbjct: 383 PNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 442
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
+PG C+ LYT Y+ M+ PE+ R L + LQ+K L + + F
Sbjct: 443 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--D 500
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP E + A+ +L + A+ D +LT LG +A+ P+D + KM++ F C +
Sbjct: 501 FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDFNCSNE 560
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKL 451
+LSI+A LS F+ P + K+ + +K+
Sbjct: 561 VLSITAMLSVPQCFVRPTEAKKAADESKM 589
Score = 171 (65.3 bits), Expect = 6.5e-42, Sum P(2) = 6.5e-42
Identities = 34/72 (47%), Positives = 51/72 (70%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ VLK+++ ++S LKVI+MSAT+D+ F YF +CP++T
Sbjct: 231 IILDEAHERTLATDILMGVLKEVVRQRS-----DLKVIVMSATLDAGKFQVYFDNCPLLT 285
Query: 78 AEGRTHPVTTYF 89
GRTHPV ++
Sbjct: 286 IPGRTHPVEIFY 297
>WB|WBGene00003392 [details] [associations]
symbol:mog-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0018996
"molting cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0048589
"developmental growth" evidence=IMP] [GO:0010172 "embryonic body
morphogenesis" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001482 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0002119 GO:GO:0008380 GO:GO:0006810 GO:GO:0018996
GO:GO:0006397 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0048589 GO:GO:0010172 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12813 EMBL:AF286900 EMBL:Z81462
EMBL:Z81457 PIR:T18832 RefSeq:NP_497027.1 UniGene:Cel.17139
ProteinModelPortal:O45244 SMR:O45244 DIP:DIP-24771N IntAct:O45244
MINT:MINT-1105817 STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6
GeneID:175117 KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117
WormBase:C04H5.6 GeneTree:ENSGT00700000104241 InParanoid:O45244
OMA:GTLHREF NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 361 (132.1 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 98/318 (30%), Positives = 158/318 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAA-SYRFGGPSSDWL-LAL 228
D +D ++ + H+ + G ILVFL G EI + + L S G + + L +
Sbjct: 555 DYVDAAIVTIMQIHLTQPL-PGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPV 613
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q K+F P+ RKV++ATNIAETS+TID + YV D G K+N ++++ +
Sbjct: 614 YANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVE 673
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
+ IS PG C+ LYT Y+ + +PE+QR L + L +
Sbjct: 674 HLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLML 733
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP +E + A+ LY +GA+ ELT LG +A+ P D +
Sbjct: 734 KSLGIHDLVHF--DFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMS 791
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM++ + C I++I+A LS + Y PK + + + A+ +G
Sbjct: 792 KMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSAR--------KGFW----- 838
Query: 468 STQSDHLVLMVAYKKWQK 485
S DH+ LM Y KWQ+
Sbjct: 839 SPAGDHITLMNVYNKWQE 856
Score = 130 (50.8 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +++DE HER+L D L ++KD+ A LK+++ SAT+D+ FS
Sbjct: 473 EPDLASYSVMMIDEAHERTLHTDILFGLVKDI-----ARFRKDLKLLISSATLDAEKFSS 527
Query: 69 YFGDCPVITAEGRTHPVTTYFLE 91
+F D P+ GR PV Y+ +
Sbjct: 528 FFDDAPIFRIPGRRFPVDIYYTQ 550
Score = 80 (33.2 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 30/116 (25%), Positives = 49/116 (42%)
Query: 468 STQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIG 527
S DH+ LM Y KWQ+ + +Q++C + ++ M RD+R Q LL +
Sbjct: 839 SPAGDHITLMNVYNKWQE------SSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVE 892
Query: 528 LINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
I + T +K +F + S++ N H VK +PN E+
Sbjct: 893 -IETKSSTDTIKIRKAITAGYFYNVSKLDN--TGHYKTVKHKHTTHPHPNSCLFEE 945
Score = 45 (20.9 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRD 648
+ H HP+S + E P ++V+ E V T+K F+R+
Sbjct: 931 KHTTHPHPNSCLFE----ETPRWVVYFELVFTSKEFMRE 965
>UNIPROTKB|O45244 [details] [associations]
symbol:mog-4 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-4" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001482 InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF00437 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0002119
GO:GO:0008380 GO:GO:0006810 GO:GO:0018996 GO:GO:0006397
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 GO:GO:0010172 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
KO:K12813 EMBL:AF286900 EMBL:Z81462 EMBL:Z81457 PIR:T18832
RefSeq:NP_497027.1 UniGene:Cel.17139 ProteinModelPortal:O45244
SMR:O45244 DIP:DIP-24771N IntAct:O45244 MINT:MINT-1105817
STRING:O45244 PaxDb:O45244 EnsemblMetazoa:C04H5.6 GeneID:175117
KEGG:cel:CELE_C04H5.6 UCSC:C04H5.6 CTD:175117 WormBase:C04H5.6
GeneTree:ENSGT00700000104241 InParanoid:O45244 OMA:GTLHREF
NextBio:886834 ArrayExpress:O45244 Uniprot:O45244
Length = 1008
Score = 361 (132.1 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 98/318 (30%), Positives = 158/318 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAA-SYRFGGPSSDWL-LAL 228
D +D ++ + H+ + G ILVFL G EI + + L S G + + L +
Sbjct: 555 DYVDAAIVTIMQIHLTQPL-PGDILVFLTGQEEIETVQEALMERSKALGSKIKELIPLPV 613
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++++ S Q K+F P+ RKV++ATNIAETS+TID + YV D G K+N ++++ +
Sbjct: 614 YANLPSDLQAKIFEPTPKDARKVVLATNIAETSVTIDGINYVIDPGFSKQNSFDARSGVE 673
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
+ IS PG C+ LYT Y+ + +PE+QR L + L +
Sbjct: 674 HLHVVTISKAAANQRAGRAGRTGPGKCFRLYTAWAYKHELEEQPIPEIQRTNLGNVVLML 733
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K L + + F L+PP +E + A+ LY +GA+ ELT LG +A+ P D +
Sbjct: 734 KSLGIHDLVHF--DFLDPPPQETLVIALEQLYALGALNHRGELTKLGRRMAEFPCDPCMS 791
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDS 467
KM++ + C I++I+A LS + Y PK + + + A+ +G
Sbjct: 792 KMIIASEKYECSEEIVTIAAMLSCNAAVFYRPKAQVIHADSAR--------KGFW----- 838
Query: 468 STQSDHLVLMVAYKKWQK 485
S DH+ LM Y KWQ+
Sbjct: 839 SPAGDHITLMNVYNKWQE 856
Score = 130 (50.8 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 28/83 (33%), Positives = 47/83 (56%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +++DE HER+L D L ++KD+ A LK+++ SAT+D+ FS
Sbjct: 473 EPDLASYSVMMIDEAHERTLHTDILFGLVKDI-----ARFRKDLKLLISSATLDAEKFSS 527
Query: 69 YFGDCPVITAEGRTHPVTTYFLE 91
+F D P+ GR PV Y+ +
Sbjct: 528 FFDDAPIFRIPGRRFPVDIYYTQ 550
Score = 80 (33.2 bits), Expect = 6.9e-42, Sum P(3) = 6.9e-42
Identities = 30/116 (25%), Positives = 49/116 (42%)
Query: 468 STQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIG 527
S DH+ LM Y KWQ+ + +Q++C + ++ M RD+R Q LL +
Sbjct: 839 SPAGDHITLMNVYNKWQE------SSFSQRWCVENYVQHRTMKRARDVRDQLVGLLERVE 892
Query: 528 LINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
I + T +K +F + S++ N H VK +PN E+
Sbjct: 893 -IETKSSTDTIKIRKAITAGYFYNVSKLDN--TGHYKTVKHKHTTHPHPNSCLFEE 945
Score = 45 (20.9 bits), Expect = 3.0e-38, Sum P(3) = 3.0e-38
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 611 RREVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRD 648
+ H HP+S + E P ++V+ E V T+K F+R+
Sbjct: 931 KHTTHPHPNSCLFE----ETPRWVVYFELVFTSKEFMRE 965
>UNIPROTKB|E1C4U5 [details] [associations]
symbol:DHX35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0071013 "catalytic step
2 spliceosome" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:NIFVVPP EMBL:AADN02019394
IPI:IPI00591771 Ensembl:ENSGALT00000005796 Uniprot:E1C4U5
Length = 705
Score = 379 (138.5 bits), Expect = 7.5e-42, Sum P(3) = 7.5e-42
Identities = 93/265 (35%), Positives = 141/265 (53%)
Query: 191 EGAILVFLPGVAEIH----ILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPE 246
+G IL FL G E+ +L+++ A R G +L +++ + S DQ KVF R
Sbjct: 274 DGDILAFLTGQEEVETVVSMLIEQARALSRTGMRKHLRVLPMYAGLPSPDQMKVFERVSR 333
Query: 247 KIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXX 306
+RKVI+ATN+AETSITI + YV DCG K YN + + +V +S
Sbjct: 334 SVRKVIVATNVAETSITIHGIAYVIDCGFVKLRAYNPKTAIECLVVVPVSKASANQRAGR 393
Query: 307 XXXVKPGICYSLYT--RHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKAL 364
+ G CY LYT +EKL + VPEMQR L + LQ+K L + + F L
Sbjct: 394 AGRNRSGKCYRLYTATEEDFEKLPQS-TVPEMQRSNLAPVILQLKALGIDNVLRF--PFL 450
Query: 365 EPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKLPVDVLIGKMMLFGGIFGCLSPI 423
PP +++ A+ +LY +G ++ LT PLG +A+ P++ + KM+L G FGC I
Sbjct: 451 SPPPAQSMVQALELLYALGGLDMHCRLTEPLGMRIAEFPLNPMFAKMLLESGNFGCSQEI 510
Query: 424 LSISAFLSYKSPFIYPKDEKQNVER 448
L+I+A + ++ F+ P ++K R
Sbjct: 511 LTIAAMMQIQNIFLIPPNQKSQAAR 535
Score = 109 (43.4 bits), Expect = 7.5e-42, Sum P(3) = 7.5e-42
Identities = 31/96 (32%), Positives = 54/96 (56%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ D LT + +++DE HER+L D + +LK + +K+ D L++I+ SAT+D+
Sbjct: 161 MMADPLLTRYSVLMLDEAHERTLYTDIAIGLLKKIQKKRG--D---LRLIVASATLDAEK 215
Query: 66 FSRYF-----GD-----CPVITAEGRTHPVTTYFLE 91
F +F GD ++T EGRT PV ++++
Sbjct: 216 FRDFFNQNDTGDPSKDTSVILTVEGRTFPVDIFYIQ 251
Score = 69 (29.3 bits), Expect = 7.5e-42, Sum P(3) = 7.5e-42
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 613 EVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
E+HIHP+S+ L + + P ++V+ E ++T K ++RD T +
Sbjct: 637 ELHIHPTSV---LYAEKPPRWVVYNEVIQTAKYYMRDVTAI 674
>UNIPROTKB|F1NHI3 [details] [associations]
symbol:DHX15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005689 "U12-type spliceosomal complex"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
GO:GO:0005689 EMBL:AADN02015408 EMBL:AADN02015409 EMBL:AADN02015410
IPI:IPI00577528 Ensembl:ENSGALT00000023259 Uniprot:F1NHI3
Length = 762
Score = 354 (129.7 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 88/269 (32%), Positives = 142/269 (52%)
Query: 191 EGAILVFLPGVAEIHILLDRLAASYRFGGPS-SDW-LLALHSSVASVDQKKVFLRPPEKI 248
EG +L+FL G EI R+ GP D ++ L+S++ Q+++F PP K
Sbjct: 316 EGDLLLFLTGQEEIDEACKRIKREIDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKK 375
Query: 249 ------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RKV+++TNIAETS+TID VV+V D G K+ YN + ++ S++ IS
Sbjct: 376 QNGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQ 435
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
+PG C+ LYT Y+ M+ PE+ R L + LQ+K L + + F
Sbjct: 436 RAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHF--D 493
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP E + A+ +L + A+ D +LT LG +A+ P+D + KM++ + C +
Sbjct: 494 FMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNE 553
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKL 451
+LSI+A LS F+ P + K+ + AK+
Sbjct: 554 VLSITAMLSVPQCFVRPTEAKKAADEAKM 582
Score = 168 (64.2 bits), Expect = 7.6e-42, Sum P(2) = 7.6e-42
Identities = 33/72 (45%), Positives = 51/72 (70%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ VLK+++ +++ LKVI+MSAT+D+ F YF +CP++T
Sbjct: 224 IILDEAHERTLATDILMGVLKEVVRQRA-----DLKVIVMSATLDAGKFQIYFDNCPLLT 278
Query: 78 AEGRTHPVTTYF 89
GRTHPV ++
Sbjct: 279 IPGRTHPVEIFY 290
>SGD|S000000815 [details] [associations]
symbol:PRP22 "DEAH-box RNA-dependent ATPase/ATP-dependent RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IMP] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IDA;IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000386 "second spliceosomal transesterification
activity" evidence=IMP;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000390 "spliceosomal complex disassembly"
evidence=IMP] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0071021 "U2-type post-spliceosomal complex"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 SGD:S000000815 GO:GO:0005524 KO:K01897
GO:GO:0003723 EMBL:BK006939 EMBL:U18778 Gene3D:2.40.50.140
InterPro:IPR012340 SUPFAM:SSF50249 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0071007 InterPro:IPR022967
SMART:SM00316 GO:GO:0000390 GeneTree:ENSGT00700000104241 KO:K12818
GO:GO:0000350 RefSeq:NP_010931.3 GeneID:856734 KEGG:sce:YER015W
OrthoDB:EOG45TGW9 EMBL:X58681 PIR:S13643 RefSeq:NP_010929.3
ProteinModelPortal:P24384 SMR:P24384 DIP:DIP-655N IntAct:P24384
MINT:MINT-648209 STRING:P24384 PaxDb:P24384 EnsemblFungi:YER013W
GeneID:856732 KEGG:sce:YER013W CYGD:YER013w OMA:QITQYLD
NextBio:982846 Genevestigator:P24384 GermOnline:YER013W
GO:GO:0071021 Uniprot:P24384
Length = 1145
Score = 341 (125.1 bits), Expect = 7.9e-42, Sum P(4) = 7.9e-42
Identities = 95/304 (31%), Positives = 145/304 (47%)
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLAL--HSSVASVDQKKVF 241
H++E G G ILVFL G EI + L + G S LL L +S++ S Q K+F
Sbjct: 686 HINE--GPGDILVFLTGQEEIDSCCEILYDRVKTLGDSIGELLILPVYSALPSEIQSKIF 743
Query: 242 LRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXX 301
P+ RKV+ ATNIAETSITID + YV D G K N YN++ + ++ IS
Sbjct: 744 EPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQAQAN 803
Query: 302 XXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLS 361
PG CY LYT + M VPE+QR L L +K + + + F
Sbjct: 804 QRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLKF-- 861
Query: 362 KALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLS 421
++PP + + A++ LY + +++ + +LT LG ++ P+D + + +L C
Sbjct: 862 DFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQCSD 921
Query: 422 PILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYK 481
I++I + LS ++ F PKD + + K DHL L+ Y
Sbjct: 922 EIVTIISMLSVQNVFYRPKDRQLEADSKKAKF-------------HHPYGDHLTLLNVYT 968
Query: 482 KWQK 485
+WQ+
Sbjct: 969 RWQQ 972
Score = 143 (55.4 bits), Expect = 7.9e-42, Sum P(4) = 7.9e-42
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D ++ + +++DE HER++ D L +LK ++A P+LKVI+ SAT++S FS
Sbjct: 591 DPEMSKYSVIMLDEAHERTVATDVLFALLK-----KAAIKRPELKVIVTSATLNSAKFSE 645
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF +CP+I G+T PV +
Sbjct: 646 YFLNCPIINIPGKTFPVEVLY 666
Score = 73 (30.8 bits), Expect = 7.9e-42, Sum P(4) = 7.9e-42
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGL 528
DHL L+ Y +WQ+ ++Q+C FL + RD++ Q + IGL
Sbjct: 959 DHLTLLNVYTRWQQ------ANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGL 1009
Score = 60 (26.2 bits), Expect = 7.9e-42, Sum P(4) = 7.9e-42
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 598 NSAAKAHPVWY---DGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
N+A + V Y +G EV IHPSS L E+ ++++ V T++ ++ T + P
Sbjct: 1032 NAAKRDSQVGYKTINGGTEVGIHPSS---SLYGKEYEYVMYHSIVLTSREYMSQVTSIEP 1088
>DICTYBASE|DDB_G0285937 [details] [associations]
symbol:dhx16 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR002483 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF01480
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0285937 GO:GO:0005524
GO:GO:0005634 GenomeReviews:CM000153_GR GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 EMBL:AAFI02000082 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 Gene3D:1.20.1390.10 KO:K12813 GO:GO:0003724
RefSeq:XP_638017.1 EnsemblProtists:DDB0233398 GeneID:8625368
KEGG:ddi:DDB_G0285937 OMA:YLLEREV Uniprot:Q54MH3
Length = 1106
Score = 361 (132.1 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 100/360 (27%), Positives = 168/360 (46%)
Query: 129 LVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCHVDET 188
L++S D+ +Y + E T + D +D ++ L H+ E
Sbjct: 615 LLISSATMDAERFSDYFDGAPTFNIPGRKYEVTTHYTQAPEADYLDAAVVTVLQIHITEP 674
Query: 189 CGEGAILVFLPGVAEIHILLDRLAASYR-FGGPSSDWLLA-LHSSVASVDQKKVFLRPPE 246
G+ ILVFL G E+ + L R G + ++ ++S++ + Q K+F P
Sbjct: 675 LGD--ILVFLTGQEEVDQAAEMLQTRTRGLGTKIKELIITRIYSTLPTDLQAKIFEPTPP 732
Query: 247 KIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXX 306
RKV++ATNIAETS+TID ++YV D G K+ +N + + S+V +S
Sbjct: 733 NARKVVLATNIAETSLTIDGIIYVIDPGFCKQKMFNPRTGMESLVITPVSRASANQRKGR 792
Query: 307 XXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEP 366
V PG C+ L+T ++ + +PE+QR L + L +K + + + F ++P
Sbjct: 793 AGRVAPGKCFRLFTAWAFDNELEENTIPEIQRTNLGNVVLLLKSMGINDLMNF--DFMDP 850
Query: 367 PKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSI 426
P + + A+ LY +GA+ +LT LG +A+ PVD + KM++ + C IL+I
Sbjct: 851 PPAQTLIAALEQLYALGALNDRGQLTKLGRKMAEFPVDPQLSKMIIASEKYKCSEEILTI 910
Query: 427 SAFLSYKSPFIY-PKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQK 485
A LS + Y PKD+ + A+ Q DHL LM + +W++
Sbjct: 911 CAMLSVGNTIFYRPKDKAFAADAARKLFF-------------HPQGDHLTLMNVFNQWRE 957
Score = 136 (52.9 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 30/81 (37%), Positives = 47/81 (58%)
Query: 11 NLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYF 70
+L + +I+DE HER+L D L +LKD+ + P LK+++ SAT+D+ FS YF
Sbjct: 577 DLASYSVLIIDEAHERTLHTDILFGLLKDITRFR-----PDLKLLISSATMDAERFSDYF 631
Query: 71 GDCPVITAEGRTHPVTTYFLE 91
P GR + VTT++ +
Sbjct: 632 DGAPTFNIPGRKYEVTTHYTQ 652
Score = 74 (31.1 bits), Expect = 1.2e-41, Sum P(3) = 1.2e-41
Identities = 22/86 (25%), Positives = 40/86 (46%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
Q DHL LM + +W R + A Q+C + F+ M +D+R Q LL + +
Sbjct: 942 QGDHLTLMNVFNQW------RESGYAVQWCFENFIQHRSMKRAQDVRDQLELLLERVEIP 995
Query: 530 NLPNKNQTGGKKKDDLDSWFSDESQM 555
+ N + T +K +F + +++
Sbjct: 996 LVSNVDDTDSIRKCIASGFFYNSAKL 1021
>ASPGD|ASPL0000014477 [details] [associations]
symbol:AN4032 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:BN001302
EMBL:AACD01000065 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12815 OMA:PSRSTWE OrthoDB:EOG4GQTD2
RefSeq:XP_661636.1 EnsemblFungi:CADANIAT00004650 GeneID:2873454
KEGG:ani:AN4032.2 Uniprot:Q5B5Z8
Length = 924
Score = 354 (129.7 bits), Expect = 1.5e-41, Sum P(4) = 1.5e-41
Identities = 95/318 (29%), Positives = 157/318 (49%)
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF-GGPSSDWLLAL 228
ED +D + + L HV + G G ILVF+ G +I + + + P +L +
Sbjct: 377 EDYVDSAVKQVLAIHVSQ--GPGDILVFMTGQEDIEATCELVDERLKLLNDPPKLSILPI 434
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
+S + + Q K+F R +RKVI+ATNIAETS+T+D +++V D G K YN + +
Sbjct: 435 YSQMPAEQQAKIFERAAPGVRKVIVATNIAETSLTVDGIMFVVDSGYSKLKVYNPKMGMD 494
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
++ IS PG Y LYT Y+ M +PE+QR L L +
Sbjct: 495 TLQITPISQANANQRSGRAGRTGPGKAYRLYTEVAYKNEMYLQTIPEIQRTSLSNTVLLL 554
Query: 349 KLLSLGRIKIFLS-KALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
K SLG +K L ++PP +E I+T++ L+ +GA++ +LT LG + P+D +
Sbjct: 555 K--SLG-VKDLLDFDFMDPPPQETISTSLFELWSLGALDNLGDLTHLGRQMTPFPMDPPL 611
Query: 408 GKMMLFGGI-FGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
K+++ +GC +L+I + LS + F PK+ ++ + A+
Sbjct: 612 AKLIITAAEQYGCSEEMLTIVSMLSVPNVFYRPKERQEESDAAREKFFVP---------- 661
Query: 467 SSTQSDHLVLMVAYKKWQ 484
+SDHL L+ Y +W+
Sbjct: 662 ---ESDHLTLLHVYTQWK 676
Score = 135 (52.6 bits), Expect = 1.5e-41, Sum P(4) = 1.5e-41
Identities = 31/72 (43%), Positives = 46/72 (63%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ +LK +L ++ D LK+I+ SAT+++ FSR+FG P
Sbjct: 305 IIMDEAHERALNTDVLMGLLKKILARR--RD---LKLIVTSATMNAERFSRFFGGAPEFI 359
Query: 78 AEGRTHPVTTYF 89
GRT PV +F
Sbjct: 360 IPGRTFPVDVHF 371
Score = 66 (28.3 bits), Expect = 1.5e-41, Sum P(4) = 1.5e-41
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+SDHL L+ Y +W+ G + +C+K+FL + + +++R Q ++
Sbjct: 662 ESDHLTLLHVYTQWKS----NGY--SDHWCTKHFLHAKTLRRAKEVRDQLNDIM 709
Score = 51 (23.0 bits), Expect = 1.5e-41, Sum P(4) = 1.5e-41
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 616 IHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGG 662
+HP+S L + ++V+ E + T+K ++ T V P + GG
Sbjct: 758 LHPTSALYGL-GYVPEYVVYHELILTSKEYMSTVTAVDPHWLAELGG 803
Score = 37 (18.1 bits), Expect = 1.9e-31, Sum P(4) = 1.9e-31
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 77 TAEGRTHPVTTYFLEDVY 94
T G+T +T + ED Y
Sbjct: 213 TGSGKTTQLTQFLYEDGY 230
>SGD|S000001794 [details] [associations]
symbol:PRP16 "DEAH-box RNA helicase involved in second
catalytic step of splicing" species:4932 "Saccharomyces cerevisiae"
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000350 "generation of catalytic
spliceosome for second transesterification step" evidence=IMP]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0071007 "U2-type catalytic step 2 spliceosome" evidence=IDA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0000386 "second spliceosomal transesterification activity"
evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000001794 GO:GO:0005524 GO:GO:0003676
EMBL:BK006944 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0071007 EMBL:Z27116 GO:GO:0008186
RefSeq:NP_013012.3 GeneID:853961 KEGG:sce:YKR086W KO:K12815
GO:GO:0000350 GeneTree:ENSGT00700000104877 OrthoDB:EOG4GQTD2
EMBL:M31524 EMBL:Z28311 PIR:S38164 RefSeq:NP_013014.3
ProteinModelPortal:P15938 SMR:P15938 DIP:DIP-2824N IntAct:P15938
MINT:MINT-1699731 STRING:P15938 PaxDb:P15938 PeptideAtlas:P15938
EnsemblFungi:YKR086W GeneID:853963 KEGG:sce:YKR088C CYGD:YKR086w
OMA:IDCGYSK NextBio:975386 Genevestigator:P15938 GermOnline:YKR086W
Uniprot:P15938
Length = 1071
Score = 322 (118.4 bits), Expect = 2.3e-41, Sum P(4) = 2.3e-41
Identities = 95/328 (28%), Positives = 156/328 (47%)
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASY------RFGGPSSD 223
+D ++ + + + H+ C G IL+F+ G +I D L + +FG + +
Sbjct: 542 QDYVEAAVSQAVKIHLANDCSSGDILIFMTGQEDIETTFDTLQEKFLQVYSKKFGTANFE 601
Query: 224 WL-----LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKE 278
+ L ++S++ + Q K+F RK+IIATNIAETS+TI + YV DCG K
Sbjct: 602 EINDIEILPIYSALPADLQFKIFQDLHGTKRKIIIATNIAETSLTIKGIRYVIDCGYSKL 661
Query: 279 NRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQR 338
YN + L S+V IS PG Y LYT +++ M +PE+QR
Sbjct: 662 KVYNPKIGLDSLVITPISKANADQRSGRAGRTAPGTAYRLYTEDTFKEDMYLQTIPEIQR 721
Query: 339 MPLVELCLQIKLLSLGRIKIFLSKA--LEPPKEEAITTAISVLYEVGAIEGDEELTPLGH 396
L L +K L + LSK ++ P + +++ L+ +GAI+ +LTPLG
Sbjct: 722 TNLSNTLLLLKSLD---VTDELSKFPFIDKPPLQTFLSSLYELWFIGAIDTSGQLTPLGL 778
Query: 397 HLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTD 456
+AK P+ + K++L GC +L+I + LS F PK+ ++ + A+
Sbjct: 779 QMAKFPLQPSLSKILLIAVRNGCSDEMLTIVSMLSVPQVFYRPKERQKEADIARNKFFIA 838
Query: 457 KLEGLSDSNDSSTQSDHLVLMVAYKKWQ 484
K SDHL L+ +++W+
Sbjct: 839 K-------------SDHLTLLNVFEQWR 853
Score = 149 (57.5 bits), Expect = 2.3e-41, Sum P(4) = 2.3e-41
Identities = 41/112 (36%), Positives = 57/112 (50%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L + VI+DE HERSL D LL K LL ++ D LK+I+ SAT+++ FS
Sbjct: 461 DDTLDKYSCVIIDEAHERSLNTDILLGFFKILLARR--RD---LKLIITSATMNAKKFSA 515
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPV 120
+FG+ P T GRT PV T + + + A+ A I SG +
Sbjct: 516 FFGNAPQFTIPGRTFPVQTIYTSNPVQDY-VEAAVSQAVKIHLANDCSSGDI 566
Score = 73 (30.8 bits), Expect = 2.3e-41, Sum P(4) = 2.3e-41
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+SDHL L+ +++W R + +C+K+F+ + RD+R Q T+L
Sbjct: 839 KSDHLTLLNVFEQW------RANNFSSHWCNKHFVQYKSLVRARDIRDQLLTIL 886
Score = 69 (29.3 bits), Expect = 2.3e-41, Sum P(4) = 2.3e-41
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGG 662
V +HP+S L P++V+ E + T+K ++ T V PF ++ +GG
Sbjct: 933 VQLHPTSALHGLGDLP-PYVVYHELLMTSKEYICCVTSVDPFWLMEYGG 980
Score = 40 (19.1 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 378 VLYEVGAIEGDEELTPLG 395
+LY++ I+ D+E T G
Sbjct: 981 LLYDIKRIKNDQEATTTG 998
>UNIPROTKB|O83538 [details] [associations]
symbol:TP_0526 "ATP-dependent helicase (HrpA)"
species:243276 "Treponema pallidum subsp. pallidum str. Nichols"
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AE000520
GenomeReviews:AE000520_GR PIR:H71312 RefSeq:NP_218966.1
ProteinModelPortal:O83538 IntAct:O83538 GeneID:2610764
KEGG:tpa:TP0526 PATRIC:20531093 OMA:WEYRERF ProtClustDB:CLSK507866
Uniprot:O83538
Length = 668
Score = 341 (125.1 bits), Expect = 2.8e-41, Sum P(4) = 2.8e-41
Identities = 94/278 (33%), Positives = 143/278 (51%)
Query: 177 LLEDLVCHVDETCG---EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVA 233
LLE +VC V+ +GAIL+FLPG I + RL+ F +LL L+ ++
Sbjct: 208 LLEKIVCIVERVIASRDKGAILIFLPGERSIKNCITRLSHERWF---RKLFLLPLYGRLS 264
Query: 234 SVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVED 293
+Q++VF R P RKV+IATNIAETSITIDDV V D G K N YN +S+ E
Sbjct: 265 KEEQEQVFNRAPFGKRKVVIATNIAETSITIDDVTTVIDSGLVKLNSYNPLSYTASLDET 324
Query: 294 WISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSL 353
IS V+ G CY LY+R +E+ PY + E+ R L E+ +++ L +
Sbjct: 325 PISQASCNQRRGRAGRVRAGTCYRLYSRDDFEQ-REPYTLEEIYRTDLSEVVMRMAELGI 383
Query: 354 GRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMML- 412
+ F + PP I A L +GA+E D L+ +G + P+ +M++
Sbjct: 384 HDFEHF--DFISPPGTHGIIGAEDTLRLLGALEDDRSLSEIGKMMCLFPLGPRQSRMIVE 441
Query: 413 -FGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
+ +L +AFLS +SP I+ +D+++ ++A
Sbjct: 442 ALRRYPHSIDDVLIAAAFLSARSPLIFSEDQEEKTKKA 479
Score = 162 (62.1 bits), Expect = 2.8e-41, Sum P(4) = 2.8e-41
Identities = 34/81 (41%), Positives = 55/81 (67%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L+ + ++VDE HERSL DF+L +LK +L+++ HD ++++ SAT+++ +FSR
Sbjct: 115 DPLLSKYSIIMVDEAHERSLNIDFILGLLKRVLQQR--HD---FRIVISSATINTAMFSR 169
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF +CPVI + +PVT F
Sbjct: 170 YFNECPVIKIDAVAYPVTVIF 190
Score = 47 (21.6 bits), Expect = 2.8e-41, Sum P(4) = 2.8e-41
Identities = 16/80 (20%), Positives = 36/80 (45%)
Query: 448 RAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSS 507
R+ L D+ E ++ T SD + V++ + + + K FC ++L
Sbjct: 463 RSPLIFSEDQEEKTKKAH--GTFSDPMGDFVSFLRIYRAYAQENNK--HSFCQHFYLDER 518
Query: 508 VMYMIRDMRIQFGTLLADIG 527
+M I +++ Q +++ +G
Sbjct: 519 IMAEISNIKEQLELIVSGMG 538
Score = 42 (19.8 bits), Expect = 2.8e-41, Sum P(4) = 2.8e-41
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 614 VHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIVSPFS 656
+HIHP S + + P F+V E V T++++ VSP S
Sbjct: 579 IHIHPGSCVYK----DRPKFIVAGEIVRTSRMYAMS---VSPLS 615
>CGD|CAL0005059 [details] [associations]
symbol:orf19.2818 species:5476 "Candida albicans" [GO:0071007
"U2-type catalytic step 2 spliceosome" evidence=IEA] [GO:0000386
"second spliceosomal transesterification activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IEA]
[GO:0000350 "generation of catalytic spliceosome for second
transesterification step" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 CGD:CAL0005059
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000080 EMBL:AACQ01000079 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K12815
RefSeq:XP_715749.1 RefSeq:XP_715799.1 STRING:Q5A227 GeneID:3642531
GeneID:3642595 KEGG:cal:CaO19.10336 KEGG:cal:CaO19.2818
Uniprot:Q5A227
Length = 1070
Score = 357 (130.7 bits), Expect = 3.6e-41, Sum P(3) = 3.6e-41
Identities = 108/388 (27%), Positives = 182/388 (46%)
Query: 168 LNEDVIDYDLLEDLVCHV------DETCGEGAILVFLPGVAEIHILLDRLAASYRF--GG 219
+N D ++ + + L H+ + +G ILVF+ G +I I D +
Sbjct: 553 VNMDYVEMAVKQVLTIHLGRWNADNNNANDGDILVFMTGQEDIEITCDLIKEKLNLLEDP 612
Query: 220 PSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
P D + ++S++ QKK+F + + RKV++ATNIAETS+T+D + YV DCG K
Sbjct: 613 PPLD-IFPIYSTMPQDLQKKIFNKTNLQRRKVVVATNIAETSLTVDGIKYVIDCGLVKVK 671
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEK-LMRPYQVPEMQR 338
YN + + ++ IS GI Y LYT E M +PE+QR
Sbjct: 672 VYNPKLGMDTLQVVPISLANADQRSGRAGRTGAGIAYRLYTEKATEPDSMYVQPIPEIQR 731
Query: 339 MPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHL 398
L + L +K L + I F L+PP ++ + ++ L+ +GA++ ELT LGH +
Sbjct: 732 SNLSNIMLLLKSLKVNDINSF--PFLDPPPKDLLNCSLYDLWAIGALDNLGELTKLGHSM 789
Query: 399 AKLPVDVLIGKMMLFGGI--FGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTD 456
+ P++ + K++L F C +++I A LS + F PK+ + A+ +
Sbjct: 790 TQFPIEPTLAKLILLSTQPEFHCSEEVVTIVAMLSVPNIFNRPKERANEADMAREKFII- 848
Query: 457 KLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLK-RG--TKAAQQFCSKYFLSSSVMYMIR 513
++SDHL L+ + +W L K +G TK +C+K FL +Y +
Sbjct: 849 ------------SESDHLTLLNVFNQWNINLNKFKGNYTKI-NNWCNKNFLQLKSLYRAK 895
Query: 514 DMRIQFGTLLADIGLINLPNKNQTGGKK 541
D++ Q ++ L L +K +K
Sbjct: 896 DIKHQLMLIMKKNKLAILKSKTDDDIRK 923
Score = 153 (58.9 bits), Expect = 3.6e-41, Sum P(3) = 3.6e-41
Identities = 36/85 (42%), Positives = 51/85 (60%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L + +I+DE HERSL D LL + K+LL K+ LK+I+ SAT+++N F++
Sbjct: 474 DPMLANYSCIIMDEAHERSLNTDILLGLFKNLLAKRK-----DLKLIVTSATMNANRFTK 528
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDV 93
+FG P GRT PV +F DV
Sbjct: 529 FFGVAPQFHIPGRTFPVEVFFNRDV 553
Score = 56 (24.8 bits), Expect = 3.6e-41, Sum P(3) = 3.6e-41
Identities = 23/109 (21%), Positives = 47/109 (43%)
Query: 613 EVHIHPSS--INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQHQT 670
++ +HP+S ++S L + ++++ E V T K ++ T V P +L +G +
Sbjct: 956 KMFLHPTSSLLDSNLST---NYVIYHELVLTKKEYMNCVTTVDPIWLLEYGYKFFGVADS 1012
Query: 671 GQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIANNEV 719
+ ID + L K+ + I++Q + N +N V
Sbjct: 1013 HRNKIDSEAILNKQKFEKQLLKDKEI-YDDIIKQQSKRRSNEISTSNRV 1060
>ASPGD|ASPL0000070923 [details] [associations]
symbol:AN4721 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003029 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00575
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003723
EMBL:BN001303 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 EMBL:AACD01000080 GO:GO:0008026
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
OMA:NAWCYEN OrthoDB:EOG45TGW9 RefSeq:XP_662325.1
ProteinModelPortal:Q5B409 EnsemblFungi:CADANIAT00005708
GeneID:2872518 KEGG:ani:AN4721.2 Uniprot:Q5B409
Length = 1241
Score = 379 (138.5 bits), Expect = 3.6e-41, Sum P(2) = 3.6e-41
Identities = 102/322 (31%), Positives = 159/322 (49%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ +L+FL G EI + L + GPS L
Sbjct: 762 KEPESDYLDAALITVMQIHLTEPPGD--MLLFLTGQEEIDTACEILYERMKALGPSVPEL 819
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETSITID++ YV D G K+ Y+
Sbjct: 820 VILPVYSALPSEMQSRIFDPAPPGGRKVVIATNIAETSITIDNIYYVIDPGFVKQKAYDP 879
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + S+V IS PG C+ LYT Y+ M P +P++QR L
Sbjct: 880 KLGMDSLVVTPISQAQAKQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPDIQRQNLSH 939
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++PP + TA+ LY + A++ + LT LG +A P+
Sbjct: 940 TILMLKAMGINDLLHF--DFMDPPPTNTMLTALEELYALSALDDEGLLTRLGRKMADFPM 997
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ + K+++ GC +LSI A LS +S F PK+++Q ++ K A D
Sbjct: 998 EPALAKVLIASVDMGCSEEMLSIVAMLSIQSVFYRPKEKQQQADQKK-AKFHDP------ 1050
Query: 464 SNDSSTQSDHLVLMVAYKKWQK 485
DHL L+ Y W++
Sbjct: 1051 ------HGDHLTLLNVYNAWKR 1066
Score = 143 (55.4 bits), Expect = 3.6e-41, Sum P(2) = 3.6e-41
Identities = 30/84 (35%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +L + +++DE HER++ D L +LK L+++ P L++I+ SAT+D++ FS
Sbjct: 685 DPDLKKYSVIMLDEAHERTIATDVLFGLLKTTLKRR-----PDLRLIVTSATLDADKFSE 739
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF CP+ + GRT PV + ++
Sbjct: 740 YFYGCPIFSIPGRTFPVEIMYSKE 763
Score = 41 (19.5 bits), Expect = 1.8e-30, Sum P(2) = 1.8e-30
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 43 KQSAHDTP--KLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLE 91
KQ P K + L+ A ++ L GD T G+T VT Y E
Sbjct: 571 KQQRESLPVYKFRQQLLEAVAENQLLI-VVGD----TGSGKTTQVTQYLAE 616
>ZFIN|ZDB-GENE-050809-39 [details] [associations]
symbol:dhx8 "DEAH (Asp-Glu-Ala-His) box polypeptide
8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0051301 "cell division" evidence=IMP] [GO:0060215
"primitive hemopoiesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0070054 "mRNA splicing, via endonucleolytic
cleavage and ligation" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-050809-39 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 InterPro:IPR022967 SMART:SM00316
GeneTree:ENSGT00700000104241 KO:K12818 OMA:NAWCYEN CTD:1659
GO:GO:0060215 InterPro:IPR013957 Pfam:PF08648 EMBL:AL833789
IPI:IPI00498887 RefSeq:XP_002663993.1 UniGene:Dr.159472
ProteinModelPortal:E7F7E3 Ensembl:ENSDART00000066282 GeneID:606595
KEGG:dre:606595 NextBio:20892459 Bgee:E7F7E3 GO:GO:0070054
Uniprot:E7F7E3
Length = 1210
Score = 386 (140.9 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 104/321 (32%), Positives = 157/321 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 740 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 797
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 798 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 857
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V IS PG CY LYT Y M VPE+QR L
Sbjct: 858 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 917
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 918 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 975
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD++ ++ K + EG
Sbjct: 976 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKF--HQPEG--- 1030
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
DHL L+ Y W+
Sbjct: 1031 --------DHLTLLAVYNSWK 1043
Score = 135 (52.6 bits), Expect = 3.7e-41, Sum P(2) = 3.7e-41
Identities = 29/84 (34%), Positives = 52/84 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +L +++DE HER++ D L +LK ++K++ +K+I+ SAT+D+ FS+
Sbjct: 663 DPDLGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRT-----DMKLIVTSATLDAVKFSQ 717
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 718 YFYEAPIFTIPGRTYPVEVLYTKE 741
Score = 46 (21.3 bits), Expect = 8.1e-32, Sum P(2) = 8.1e-32
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 40 LLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVY 94
+LE++ + KLK L+ A D+ + G+ T G+T +T Y E Y
Sbjct: 548 ILEQRESLPIYKLKEQLIQAVHDNQILI-VIGE----TGSGKTTQITQYLAEAGY 597
>UNIPROTKB|Q608K8 [details] [associations]
symbol:MCA1482 "ATP-dependent helicase HrpA" species:243233
"Methylococcus capsulatus str. Bath" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR010222
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:AE017282 GenomeReviews:AE017282_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578
OMA:TYQFEPG InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_113939.1 ProteinModelPortal:Q608K8 GeneID:3104911
KEGG:mca:MCA1482 PATRIC:22606802 Uniprot:Q608K8
Length = 1294
Score = 362 (132.5 bits), Expect = 4.0e-41, Sum P(3) = 4.0e-41
Identities = 119/381 (31%), Positives = 186/381 (48%)
Query: 159 EQTRQNLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFG 218
E+ +R + I D +++L H + T G IL+FL G EI D A S R
Sbjct: 264 EEESDETERGEQQAI-LDAVDEL--HRENT---GDILIFLSGEREIR---DT-AESLRKH 313
Query: 219 GPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKE 278
P+ +L L+S + +Q+K+F P R++++ATN+AETS+T+ + V D G +
Sbjct: 314 HPADCEVLPLYSRLTVSEQEKIF--KPHGRRRIVLATNVAETSLTVPGIRGVIDAGYARI 371
Query: 279 NRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRP-YQVPEMQ 337
+RY+ + KL + + IS V PG+C LY+ + L RP + PE+
Sbjct: 372 SRYSHRSKLQRLPIEKISRASANQRAGRCGRVGPGVCIRLYSEQDF--LNRPEFTDPEIL 429
Query: 338 RMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHH 397
R L + LQ+K L+LG I++F +EPP E + + L E+ A++ LT LG
Sbjct: 430 RTNLAAVILQMKALNLGDIRVF--PFVEPPDERLVRDGLRTLQEINALDAQGRLTELGRR 487
Query: 398 LAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALL--- 454
LA+LPVD +G+++L G CLS + I A LS P P D+ Q ++
Sbjct: 488 LARLPVDPRLGRILLAGAEENCLSEVCIIVAALSVPDPRERPADKAQAADQKHARFRHPD 547
Query: 455 TDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRD 514
+D + L+ ND Q HL G+K +Q+C FLS+ M RD
Sbjct: 548 SDFMAILALWNDYEEQRQHL---------------SGSKL-RQYCRDNFLSALRMREWRD 591
Query: 515 MRIQFGTLL-ADIGLINLPNK 534
+ Q ++ ++GL PN+
Sbjct: 592 IHQQILEVVKGELGL--RPNQ 610
Score = 160 (61.4 bits), Expect = 4.0e-41, Sum P(3) = 4.0e-41
Identities = 38/79 (48%), Positives = 51/79 (64%)
Query: 7 QGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLF 66
Q D+ L +IVDE HERSL DFLL LK LL ++ HD LK+++ SAT+D F
Sbjct: 180 QTDRFLDQYDTLIVDEAHERSLNIDFLLGYLKWLLPRR--HD---LKLVITSATIDPERF 234
Query: 67 SRYFGDCPVITAEGRTHPV 85
SR+F + P++ GRT+PV
Sbjct: 235 SRHFDNAPIVRVPGRTYPV 253
Score = 48 (22.0 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 351 LSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
L+LG +++ L EP E+ TAI L+ + I+ E L+ L L + V LI
Sbjct: 847 LALGPVRLKLEYRFEPGHEDDGVTAIVPLHVLNQID-PEPLSWLVPGLYREKVVALI 902
Score = 47 (21.6 bits), Expect = 4.0e-41, Sum P(3) = 4.0e-41
Identities = 27/107 (25%), Positives = 46/107 (42%)
Query: 565 IVKAILCAGLYPNVAATEQG-VAGAALSNLRKSSNSAAKAHPVWYDGRR--EVHIHPSSI 621
+VK L GL PN + G + A L+ L + + Y G R + I P S
Sbjct: 599 VVKGEL--GLRPNQVPADYGEIHRALLTGLL--CHVGFRQDQNEYVGVRGQKFQIFPGSF 654
Query: 622 NSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSINVQH 668
+ + +++ E+VET++V+ R + P I G + +H
Sbjct: 655 LFKTRPV---WIISAEQVETSRVYARTVARIEPEWIEKCGAHLLKRH 698
>SGD|S000003088 [details] [associations]
symbol:PRP43 "RNA helicase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IMP;IDA] [GO:0000390 "spliceosomal
complex disassembly" evidence=IGI;IDA] [GO:0030490 "maturation of
SSU-rRNA" evidence=IGI] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0071014 "post-mRNA
release spliceosomal complex" evidence=IMP] [GO:0006364 "rRNA
processing" evidence=IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0000462 "maturation of SSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000003088
GO:GO:0005739 GO:GO:0005524 EMBL:BK006941 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0000463
GO:GO:0004004 HOGENOM:HOG000175261 GO:GO:0000390 GO:GO:0000466
GO:GO:0000462 KO:K12820 GeneTree:ENSGT00650000093246 OMA:TVLQIHA
OrthoDB:EOG4S7NZ4 GO:GO:0071014 EMBL:U41851 EMBL:Z72642 PIR:S64130
RefSeq:NP_011395.1 PDB:2XAU PDB:3KX2 PDBsum:2XAU PDBsum:3KX2
ProteinModelPortal:P53131 SMR:P53131 DIP:DIP-5152N IntAct:P53131
MINT:MINT-497996 STRING:P53131 PaxDb:P53131 PeptideAtlas:P53131
PRIDE:P53131 EnsemblFungi:YGL120C GeneID:852757 KEGG:sce:YGL120C
CYGD:YGL120c EvolutionaryTrace:P53131 NextBio:972201
Genevestigator:P53131 GermOnline:YGL120C Uniprot:P53131
Length = 767
Score = 323 (118.8 bits), Expect = 6.0e-41, Sum P(3) = 6.0e-41
Identities = 90/291 (30%), Positives = 144/291 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAAS-----YRFG-GPSSDW 224
D +D + L H E G+ IL+FL G EI + +++ G GP S
Sbjct: 285 DYLDSAIRTVLQIHATEEAGD--ILLFLTGEDEIEDAVRKISLEGDQLVREEGCGPLS-- 340
Query: 225 LLALHSSVASVDQKKVFLRPPEKI-----RKVIIATNIAETSITIDDVVYVFDCGRHKEN 279
+ L+ S+ Q+++F PE RKV+I+TNIAETS+TID +VYV D G K+
Sbjct: 341 VYPLYGSLPPHQQQRIFEPAPESHNGRPGRKVVISTNIAETSLTIDGIVYVVDPGFSKQK 400
Query: 280 RYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRM 339
YN + ++ S++ IS +PG C+ LYT ++K + PE+ R
Sbjct: 401 VYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFQKELIEQSYPEILRS 460
Query: 340 PLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLA 399
L L++K L + + F ++PP E + A+ L + ++ + LTPLG +
Sbjct: 461 NLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNYLACLDDEGNLTPLGRLAS 518
Query: 400 KLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAK 450
+ P+D ++ M++ F C IL+I A LS + FI P +K+ + AK
Sbjct: 519 QFPLDPMLAVMLIGSFEFQCSQEILTIVAMLSVPNVFIRPTKDKKRADDAK 569
Score = 182 (69.1 bits), Expect = 6.0e-41, Sum P(3) = 6.0e-41
Identities = 41/114 (35%), Positives = 70/114 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +L+ + +I+DE HER+L D L+ +LK +++++ P LK+I+MSAT+D+ F R
Sbjct: 203 DHDLSRYSCIILDEAHERTLATDILMGLLKQVVKRR-----PDLKIIIMSATLDAEKFQR 257
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSA--AAIRYEASSKSGPV 120
YF D P++ GRT+PV Y+ + +Y LDSA ++ A+ ++G +
Sbjct: 258 YFNDAPLLAVPGRTYPVELYYTPEFQR--DY---LDSAIRTVLQIHATEEAGDI 306
Score = 54 (24.1 bits), Expect = 6.0e-41, Sum P(3) = 6.0e-41
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 599 SAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
S AK + D + +V IHPS++ + ++++ E V T+K ++R T V P
Sbjct: 665 SGAKGYITVKDNQ-DVLIHPSTVLGH----DAEWVIYNEFVLTSKNYIRTVTSVRP 715
Score = 38 (18.4 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 20/70 (28%), Positives = 33/70 (47%)
Query: 232 VASVDQKKVFLRPPEKIRKVIIATNI-AETS---ITIDDVVYVF------DCGRHK--EN 279
VA + VF+RP + ++ A NI A IT+ +V + F + G HK +
Sbjct: 546 VAMLSVPNVFIRPTKDKKRADDAKNIFAHPDGDHITLLNVYHAFKSDEAYEYGIHKWCRD 605
Query: 280 RYNSQKKLSS 289
Y + + LS+
Sbjct: 606 HYLNYRSLSA 615
>CGD|CAL0000153 [details] [associations]
symbol:orf19.1687 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000466 "maturation of 5.8S rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000463 "maturation of LSU-rRNA from tricistronic rRNA
transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0000153 GO:GO:0005524 GO:GO:0003676 EMBL:AACQ01000014
EMBL:AACQ01000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 KO:K12820 RefSeq:XP_721644.1
RefSeq:XP_721764.1 STRING:Q5AJA5 GeneID:3636669 GeneID:3636709
KEGG:cal:CaO19.1687 KEGG:cal:CaO19.9255 Uniprot:Q5AJA5
Length = 767
Score = 316 (116.3 bits), Expect = 9.1e-41, Sum P(3) = 9.1e-41
Identities = 92/294 (31%), Positives = 141/294 (47%)
Query: 174 DY-DLLEDLVCHVDETCGEGAILVFLPGVAEIH-----ILL--DRLAASYRFGGPSSDWL 225
DY D V + T GEG IL+FL G EI I L D L G P +
Sbjct: 286 DYLDAAIRTVLQIHATEGEGDILLFLTGEEEIEDACRKISLEGDELVREQNCG-PLK--V 342
Query: 226 LALHSSVASVDQKKVFLRPPEKI-------RKVIIATNIAETSITIDDVVYVFDCGRHKE 278
L+ S+ Q+K+F P RKVII+TNIAETS+TID +VYV D G K+
Sbjct: 343 YPLYGSLPPHQQQKIFEPAPTNPNPNGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQ 402
Query: 279 NRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQR 338
YN + ++ S++ IS +PG C+ LYT ++K + PE+ R
Sbjct: 403 KVYNPRVRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFKKELIEQSYPEILR 462
Query: 339 MPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHL 398
L L++K L + + F ++PP E + A+ L + + + +LT LG
Sbjct: 463 SNLSSTVLELKKLGIDDLVHF--DFMDPPAPETMMRALEELNYLQCLSDEGDLTALGRLA 520
Query: 399 AKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLA 452
++ P+D ++ M++ + C IL+I A LS + F+ P ++ + AKL+
Sbjct: 521 SQFPLDPMLAVMLIGSPAYSCSEEILTIVAMLSVPNVFVRPASARKRADEAKLS 574
Score = 170 (64.9 bits), Expect = 9.1e-41, Sum P(3) = 9.1e-41
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT + +I+DE HER+L D L+ +LK + ++ P LK+I+MSAT+D+ F
Sbjct: 204 DHDLTRYSCIILDEAHERTLATDILMGLLKQVSVRR-----PDLKIIIMSATLDAEKFQN 258
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF + P++ GRTHPV Y+
Sbjct: 259 YFNNAPLLAVPGRTHPVEIYY 279
Score = 72 (30.4 bits), Expect = 9.1e-41, Sum P(3) = 9.1e-41
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 585 VAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKV 644
VAG + +K S + K + D + +V IHPS++ S+ E +L++ E V T+K
Sbjct: 658 VAGFFMQVAKKKSGN--KGYLTVKDNQ-DVLIHPSTVLSK----EGEWLIYNEFVLTSKN 710
Query: 645 FLRDTTIVSP 654
++R T+V P
Sbjct: 711 YIRTVTVVKP 720
>POMBASE|SPAC10F6.02c [details] [associations]
symbol:prp22 "ATP-dependent RNA helicase Prp22"
species:4896 "Schizosaccharomyces pombe" [GO:0000390 "spliceosomal
complex disassembly" evidence=ISS] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005681 "spliceosomal complex"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003029 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS50126 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
PomBase:SPAC10F6.02c GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0005681 GO:GO:0003723
Gene3D:2.40.50.140 InterPro:IPR012340 SUPFAM:SSF50249
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
InterPro:IPR022967 SMART:SM00316 GO:GO:0000390 KO:K12818
OMA:NAWCYEN PIR:T37496 RefSeq:NP_593253.1 ProteinModelPortal:O42643
IntAct:O42643 STRING:O42643 PRIDE:O42643
EnsemblFungi:SPAC10F6.02c.1 GeneID:2542978 KEGG:spo:SPAC10F6.02c
OrthoDB:EOG45TGW9 NextBio:20804011 Uniprot:O42643
Length = 1168
Score = 373 (136.4 bits), Expect = 1.2e-40, Sum P(4) = 1.2e-40
Identities = 99/321 (30%), Positives = 159/321 (49%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K+ D +D L+ + H+ E G G ILVFL G EI + L + G S L
Sbjct: 696 KQPEADYLDAALMTVMQIHLSE--GPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPEL 753
Query: 226 LAL--HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+ L +S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K++ ++
Sbjct: 754 VILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDP 813
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + S++ IS PG CY LYT Y M P +PE+QR L
Sbjct: 814 KLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSH 873
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++PP + + A+ LY + A++ + LTPLG +A P+
Sbjct: 874 TILMLKAMGINDLLNF--DFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPM 931
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ + K+++ GC +LSI A LS + + P++++Q +R +
Sbjct: 932 EPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQF---------- 981
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
++ +SDHL L+ Y W+
Sbjct: 982 ---ANPESDHLTLLNVYTTWK 999
Score = 143 (55.4 bits), Expect = 1.2e-40, Sum P(4) = 1.2e-40
Identities = 38/111 (34%), Positives = 59/111 (53%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L+ + +I+DE HER++ D L +LK + K+ P LK+I+ SAT+D+ FS
Sbjct: 619 DPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKR-----PDLKLIVTSATLDAERFSS 673
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGP 119
YF CP+ T GR++PV + + +Y LD+A + GP
Sbjct: 674 YFYKCPIFTIPGRSYPVEIMYTKQ--PEADY---LDAALMTVMQIHLSEGP 719
Score = 49 (22.3 bits), Expect = 1.2e-40, Sum P(4) = 1.2e-40
Identities = 11/41 (26%), Positives = 26/41 (63%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
V++HPS + K+ E ++++ E ++T+K ++ + V+P
Sbjct: 1080 VYMHPSGVLFG-KAAE--WVIYHELIQTSKEYMHTVSTVNP 1117
Score = 42 (19.8 bits), Expect = 2.9e-30, Sum P(4) = 2.9e-30
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 77 TAEGRTHPVTTYFLEDVYES 96
T G+T +T Y E+ Y S
Sbjct: 535 TGSGKTTQITQYLAEEGYTS 554
Score = 37 (18.1 bits), Expect = 1.2e-40, Sum P(4) = 1.2e-40
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 565 IVKAILCAGLYPNVA 579
I++A LC+G + NVA
Sbjct: 1049 ILRA-LCSGYFTNVA 1062
>FB|FBgn0026713 [details] [associations]
symbol:l(1)G0007 "lethal (1) G0007" species:7227 "Drosophila
melanogaster" [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0002121 "inter-male
aggressive behavior" evidence=IMP] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0002121
GO:GO:0007476 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0000381 KO:K12815 GeneTree:ENSGT00700000104877 OMA:PSRSTWE
UniGene:Dm.4249 GeneID:32373 KEGG:dme:Dmel_CG32604
FlyBase:FBgn0026713 ChiTaRS:l(1)G0007 GenomeRNAi:32373
NextBio:778160 EMBL:AY058553 RefSeq:NP_572947.1 SMR:Q9VY54
MINT:MINT-334469 STRING:Q9VY54 EnsemblMetazoa:FBtr0073900
UCSC:CG32604-RA InParanoid:Q9VY54 Uniprot:Q9VY54
Length = 1222
Score = 341 (125.1 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 95/324 (29%), Positives = 163/324 (50%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHI----LLDRLAASYRFGGPS 221
K ED ++ + + L H+ T EG +L+F+PG +I + L +RLA P+
Sbjct: 719 KNTCEDYVESAVKQALQVHL--TPNEGDMLIFMPGQEDIEVTCEVLEERLAEIDN--APA 774
Query: 222 SDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
+L ++S + S Q K+F + + +RK ++ATNIAETS+T+D ++YV D G K Y
Sbjct: 775 LS-ILPIYSQLPSDLQAKIFQKSSDGLRKCVVATNIAETSLTVDGIIYVIDSGYCKLKVY 833
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
N + + ++ IS PG Y LYT+ +Y+ + VPE+QR L
Sbjct: 834 NPRIGMDALQIYPISQANANQRSGRAGRTGPGQAYRLYTQRQYKDELLALTVPEIQRTNL 893
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
L +K SLG + + ++PP ++ I ++ L+ +GA++ LT LG +A+
Sbjct: 894 ANTVLLLK--SLGVVDLLQFHFMDPPPQDNILNSLYQLWILGALDHTGALTTLGRQMAEF 951
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGL 461
P+D +M++ GC + +L I + LS S F PK + D+ +G+
Sbjct: 952 PLDPPQCQMLIVACRMGCSAEVLIIVSMLSVPSIFYRPKGRE------------DEADGV 999
Query: 462 SDSNDSSTQSDHLVLMVAYKKWQK 485
+ +SDHL + Y++W++
Sbjct: 1000 REKFQRP-ESDHLTYLNVYQQWRQ 1022
Score = 157 (60.3 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 35/87 (40%), Positives = 54/87 (62%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L + +I+DE HERSL D L +L++++ ++ HD LK+I+ SAT+DS+ F+
Sbjct: 642 DPELDSYSAIIMDEAHERSLSTDVLFGLLREIVARR--HD---LKLIVTSATMDSSKFAT 696
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYE 95
+FG+ P T GRT PV F ++ E
Sbjct: 697 FFGNVPTFTIPGRTFPVDVMFSKNTCE 723
Score = 67 (28.6 bits), Expect = 1.3e-40, Sum P(3) = 1.3e-40
Identities = 16/73 (21%), Positives = 35/73 (47%)
Query: 456 DKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDM 515
D+ +G+ + +SDHL + Y++W R + +C+++F+ M +R++
Sbjct: 994 DEADGVREKFQRP-ESDHLTYLNVYQQW------RQNNYSSTWCNEHFIHIKAMRKVREV 1046
Query: 516 RIQFGTLLADIGL 528
R Q ++ L
Sbjct: 1047 RQQLKDIMTQQNL 1059
Score = 39 (18.8 bits), Expect = 2.3e-28, Sum P(3) = 2.3e-28
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 77 TAEGRTHPVTTYFLEDVY 94
T G+T +T Y ED Y
Sbjct: 559 TGSGKTTQLTQYLHEDGY 576
>WB|WBGene00003389 [details] [associations]
symbol:mog-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0007281 "germ cell development" evidence=IMP] [GO:0040022
"feminization of hermaphroditic germ-line" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0002119
GO:GO:0008380 GO:GO:0006397 GO:GO:0010171 GO:GO:0003676
GO:GO:0042127 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0040022 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570 PIR:S41025
RefSeq:NP_499212.1 UniGene:Cel.5743 ProteinModelPortal:P34498
SMR:P34498 IntAct:P34498 STRING:P34498 PaxDb:P34498 PRIDE:P34498
EnsemblMetazoa:K03H1.2 GeneID:176409 KEGG:cel:CELE_K03H1.2
UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 338 (124.0 bits), Expect = 3.1e-40, Sum P(3) = 3.1e-40
Identities = 86/316 (27%), Positives = 154/316 (48%)
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASY-RFGGPSSDWLLAL 228
ED +D + + + H+ +G IL+F+PG +I + + +L +
Sbjct: 631 EDYVDAAVKQAVTIHLGGM--DGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPI 688
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
+S + S Q K+F R P +RK I+ATNIAETS+T+D +++V D G K YN + +
Sbjct: 689 YSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMD 748
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
++ +S PG CY LYT +++ + VPE+QR L + L +
Sbjct: 749 ALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLL 808
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K SLG + ++ P ++ + ++ L+ +GA++ +LTP+G + + P+D +
Sbjct: 809 K--SLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLS 866
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSS 468
KM++ GC +L+I + LS + F PK ++ + K +K +
Sbjct: 867 KMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKK-----EKFQ--------V 913
Query: 469 TQSDHLVLMVAYKKWQ 484
+SDHL + Y +W+
Sbjct: 914 PESDHLTFLNVYIQWR 929
Score = 147 (56.8 bits), Expect = 3.1e-40, Sum P(3) = 3.1e-40
Identities = 34/82 (41%), Positives = 54/82 (65%)
Query: 8 GDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFS 67
GD +L + +I+DE HERSL D L +L++++ K++ D LK+I+ SAT+D++ F+
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRA--D---LKLIVTSATMDADKFA 602
Query: 68 RYFG-DCPVITAEGRTHPVTTY 88
+FG +CP T GRT PV +
Sbjct: 603 DFFGGNCPTFTIPGRTFPVELF 624
Score = 75 (31.5 bits), Expect = 3.1e-40, Sum P(3) = 3.1e-40
Identities = 24/115 (20%), Positives = 54/115 (46%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
+SDHL + Y +W R K + ++C+ +L + +R++R Q ++ D+ L
Sbjct: 915 ESDHLTFLNVYIQW------RTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLP 968
Query: 530 NLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQG 584
+ N ++ +K ++F + +++ + + ++ I C L+P A G
Sbjct: 969 LISNGSEWDIVRKCICSAYFHNAARLKGI-GEYVNVRTGIPCF-LHPTSALFGMG 1021
Score = 37 (18.1 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 77 TAEGRTHPVTTYFLED 92
T G+T + Y LED
Sbjct: 466 TGSGKTTQLAQYLLED 481
>UNIPROTKB|P34498 [details] [associations]
symbol:mog-1 "Probable pre-mRNA-splicing factor
ATP-dependent RNA helicase mog-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0002119 GO:GO:0008380 GO:GO:0006397 GO:GO:0010171
GO:GO:0003676 GO:GO:0042127 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0040022 GO:GO:0008026
HOGENOM:HOG000175261 EMBL:Z29560 KO:K12815 EMBL:AF120269 PIR:F88570
PIR:S41025 RefSeq:NP_499212.1 UniGene:Cel.5743
ProteinModelPortal:P34498 SMR:P34498 IntAct:P34498 STRING:P34498
PaxDb:P34498 PRIDE:P34498 EnsemblMetazoa:K03H1.2 GeneID:176409
KEGG:cel:CELE_K03H1.2 UCSC:K03H1.2.1 CTD:176409 WormBase:K03H1.2
GeneTree:ENSGT00700000104877 InParanoid:P34498 OMA:PSRSTWE
NextBio:892452 Uniprot:P34498
Length = 1131
Score = 338 (124.0 bits), Expect = 3.1e-40, Sum P(3) = 3.1e-40
Identities = 86/316 (27%), Positives = 154/316 (48%)
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASY-RFGGPSSDWLLAL 228
ED +D + + + H+ +G IL+F+PG +I + + +L +
Sbjct: 631 EDYVDAAVKQAVTIHLGGM--DGDILIFMPGQEDIECTCEMIKEKLGELDEAPPLAVLPI 688
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
+S + S Q K+F R P +RK I+ATNIAETS+T+D +++V D G K YN + +
Sbjct: 689 YSQLPSDLQAKIFQRAPGGMRKAIVATNIAETSLTVDGILFVIDPGFCKMKVYNPRIGMD 748
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
++ +S PG CY LYT +++ + VPE+QR L + L +
Sbjct: 749 ALSIFPVSQASANQRTGRAGRTGPGQCYRLYTERQFKDELLKSTVPEIQRTNLANVVLLL 808
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K SLG + ++ P ++ + ++ L+ +GA++ +LTP+G + + P+D +
Sbjct: 809 K--SLGVDDLLKFHFMDAPPQDNMLNSMYQLWTLGALDNTGQLTPMGRKMVEFPLDPTLS 866
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSS 468
KM++ GC +L+I + LS + F PK ++ + K +K +
Sbjct: 867 KMLIMSAEMGCSDEVLTIVSMLSVPAIFFRPKGREEEADAKK-----EKFQ--------V 913
Query: 469 TQSDHLVLMVAYKKWQ 484
+SDHL + Y +W+
Sbjct: 914 PESDHLTFLNVYIQWR 929
Score = 147 (56.8 bits), Expect = 3.1e-40, Sum P(3) = 3.1e-40
Identities = 34/82 (41%), Positives = 54/82 (65%)
Query: 8 GDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFS 67
GD +L + +I+DE HERSL D L +L++++ K++ D LK+I+ SAT+D++ F+
Sbjct: 548 GDGSLDQYSAIIMDEAHERSLNTDVLFGLLREVIAKRA--D---LKLIVTSATMDADKFA 602
Query: 68 RYFG-DCPVITAEGRTHPVTTY 88
+FG +CP T GRT PV +
Sbjct: 603 DFFGGNCPTFTIPGRTFPVELF 624
Score = 75 (31.5 bits), Expect = 3.1e-40, Sum P(3) = 3.1e-40
Identities = 24/115 (20%), Positives = 54/115 (46%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLI 529
+SDHL + Y +W R K + ++C+ +L + +R++R Q ++ D+ L
Sbjct: 915 ESDHLTFLNVYIQW------RTHKYSAKWCADNYLHVKALKKVREVRAQLKEIMQDLKLP 968
Query: 530 NLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQG 584
+ N ++ +K ++F + +++ + + ++ I C L+P A G
Sbjct: 969 LISNGSEWDIVRKCICSAYFHNAARLKGI-GEYVNVRTGIPCF-LHPTSALFGMG 1021
Score = 37 (18.1 bits), Expect = 8.1e-29, Sum P(3) = 8.1e-29
Identities = 7/16 (43%), Positives = 9/16 (56%)
Query: 77 TAEGRTHPVTTYFLED 92
T G+T + Y LED
Sbjct: 466 TGSGKTTQLAQYLLED 481
>MGI|MGI:1921941 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] [GO:0007140 "male meiosis"
evidence=IMP] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009566 "fertilization" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IMP] [GO:0043046
"DNA methylation involved in gamete generation" evidence=IMP]
[GO:0071547 "piP-body" evidence=IDA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 MGI:MGI:1921941 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0030154 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0031047 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
EMBL:AC112520 OMA:INDWFTI CTD:122402 OrthoDB:EOG4F4S96
EMBL:AB362563 EMBL:AC132623 EMBL:BC115831 EMBL:BC116656
IPI:IPI00749982 IPI:IPI00849630 IPI:IPI00914159 RefSeq:NP_083332.1
UniGene:Mm.60648 ProteinModelPortal:Q14BI7 SMR:Q14BI7 STRING:Q14BI7
PhosphoSite:Q14BI7 PaxDb:Q14BI7 PRIDE:Q14BI7
Ensembl:ENSMUST00000079009 GeneID:74691 KEGG:mmu:74691
UCSC:uc007pei.1 UCSC:uc007pej.1 UCSC:uc011yva.1
HOGENOM:HOG000047965 HOVERGEN:HBG072266 InParanoid:B1Q3J8
NextBio:341402 Bgee:Q14BI7 Genevestigator:Q14BI7 Uniprot:Q14BI7
Length = 1383
Score = 364 (133.2 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 105/302 (34%), Positives = 149/302 (49%)
Query: 193 AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVI 252
++LVFLPG+ EI+ + + L + LHSSV +Q VFL P RK+I
Sbjct: 388 SVLVFLPGLGEINYMHELLTNMIH----KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKII 443
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKP 312
++TNIAE+S+T+ DV YV D + + S+ W S V
Sbjct: 444 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSK 503
Query: 313 GICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAI 372
G CY L R ++ + + VPEM R PL L++KLL +G + L+ AL PP I
Sbjct: 504 GYCYRLIPRDFWDSAIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPSLSDI 563
Query: 373 TTAISVLYEVGA--IEG---DE-----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
I +L EVGA + G DE ELT LG LA+LPV +GK+++ G +FGCL
Sbjct: 564 ERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLVVLGHVFGCLDE 623
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
L I+A LS K+ F P + + R K+ S++SD L L+ A++
Sbjct: 624 CLIIAAALSLKNFFTMPFRQHLDGYRNKVHF------------SGSSRSDCLALVEAFRA 671
Query: 483 WQ 484
WQ
Sbjct: 672 WQ 673
Score = 150 (57.9 bits), Expect = 4.5e-40, Sum P(2) = 4.5e-40
Identities = 40/104 (38%), Positives = 57/104 (54%)
Query: 10 KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 69
K+L TH+ +DEVHER+ DFLL+V++ LL S +KV+LMSAT++ F+ Y
Sbjct: 245 KSLMEFTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRF----VKVVLMSATINCKQFADY 300
Query: 70 FG--------DCPVITAEGRTHPVTTYFLED---VYES-INYRL 101
F V EG+ H + Y+L D +Y S + YRL
Sbjct: 301 FAVPVQNKMNPAYVFEVEGKPHAIEEYYLNDLGHIYHSGLPYRL 344
Score = 37 (18.1 bits), Expect = 4.8e-05, Sum P(2) = 4.8e-05
Identities = 11/56 (19%), Positives = 24/56 (42%)
Query: 337 QRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT 392
Q L C Q+K + K F+ + P + A+++ ++ ++ EL+
Sbjct: 792 QLQSLFRQCGQVKSIVFDGAKAFVEFSRNPTERFKTLPAVNLAVKMSQLKVSLELS 847
>TAIR|locus:2010549 [details] [associations]
symbol:AT1G27900 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0007131 "reciprocal meiotic
recombination" evidence=RCA] [GO:0010332 "response to gamma
radiation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0032204 "regulation of telomere
maintenance" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0042138 "meiotic DNA double-strand
break formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR003593 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 KO:K12818 EMBL:AY054692
EMBL:AY128718 IPI:IPI00545738 RefSeq:NP_564296.1 UniGene:At.25438
ProteinModelPortal:Q93Y16 SMR:Q93Y16 PaxDb:Q93Y16 PRIDE:Q93Y16
EnsemblPlants:AT1G27900.1 GeneID:839683 KEGG:ath:AT1G27900
TAIR:At1g27900 InParanoid:Q93Y16 OMA:NCRRFIV PhylomeDB:Q93Y16
ProtClustDB:CLSN2688039 ArrayExpress:Q93Y16 Genevestigator:Q93Y16
Uniprot:Q93Y16
Length = 700
Score = 356 (130.4 bits), Expect = 6.1e-40, Sum P(3) = 6.1e-40
Identities = 108/370 (29%), Positives = 172/370 (46%)
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYRF--GGPSSDWLL-ALHSSVASVDQKKV 240
HV E EG IL+F+ G +I L+ RL R G D ++ LH S+ Q +V
Sbjct: 208 HVREP--EGDILIFMTGQDDIEKLVSRLEEKVRSLAEGSCMDAIIYPLHGSLPPEMQVRV 265
Query: 241 FLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXX 300
F PP R+ I++TNIAETS+T+D VVYV D G K+ +YN + S+ IS
Sbjct: 266 FSPPPPNCRRFIVSTNIAETSLTVDGVVYVIDSGYVKQRQYNPSSGMFSLDVIQISKVQA 325
Query: 301 XXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFL 360
+PG CY LY Y +PE+QR L L +K L L I I
Sbjct: 326 NQRAGRAGRTRPGKCYRLYPLAVYRDDFLDATIPEIQRTSLAGSVLYLKSLDLPDIDILK 385
Query: 361 SKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCL 420
L+ P E++ A+ LY + AI+ + +T +G ++ LP++ + + ++ GCL
Sbjct: 386 FDFLDAPSSESLEDALKQLYFIDAIDENGAITRIGRTMSDLPLEPSLSRTLIEANETGCL 445
Query: 421 SPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSN--DSSTQSDHLVLMV 478
S L++ A LS ++ + P K + ++ K D+ DSN + S DH+ L+
Sbjct: 446 SQALTVVAMLSAETTLL-PARSKPSEKKRK----HDE-----DSNLPNGSGYGDHIQLLQ 495
Query: 479 AYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTG 538
++ W + T +C + + M ++D+R Q ++ I L +
Sbjct: 496 IFESWDR------TNYDPVWCKENGMQVRGMVFVKDVRRQLCQIMQKISKDRL--EVGAD 547
Query: 539 GKKKDDLDSW 548
G+K D +
Sbjct: 548 GRKSSSRDDY 557
Score = 131 (51.2 bits), Expect = 6.1e-40, Sum P(3) = 6.1e-40
Identities = 30/90 (33%), Positives = 53/90 (58%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HERSL D LL ++K L+ ++++ KV++ SAT+D S +F CPV+
Sbjct: 121 IILDEAHERSLNTDILLGLVKRLVRIRASN----FKVLITSATLDGEKVSEFFSGCPVLN 176
Query: 78 AEGRTHPVTTYFLED---VYESINYRLALD 104
G+ +PV + ++ Y + ++A+D
Sbjct: 177 VPGKLYPVEILYSKERPVSYIESSLKVAID 206
Score = 55 (24.4 bits), Expect = 6.1e-40, Sum P(3) = 6.1e-40
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 614 VHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
V +HPSS+ S P ++V+ E + T + F+R+ V
Sbjct: 592 VQVHPSSVLSADNDGMMPNYVVYHELISTTRPFMRNVCAV 631
Score = 43 (20.2 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 437 IYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVA 479
++ KD ++ + + + D+LE +D SS++ D+ L A
Sbjct: 521 VFVKDVRRQLCQIMQKISKDRLEVGADGRKSSSRDDYRKLRKA 563
>UNIPROTKB|C3XYZ4 [details] [associations]
symbol:BRAFLDRAFT_65715 "Putative uncharacterized protein"
species:7739 "Branchiostoma floridae" [GO:0005634 "nucleus"
evidence=ISS] [GO:0007140 "male meiosis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0009566 "fertilization"
evidence=ISS] [GO:0034587 "piRNA metabolic process" evidence=ISS]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00028 PROSITE:PS51194 SMART:SM00355
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0005634 GO:GO:0008270 GO:GO:0009566 GO:GO:0007283
GO:GO:0003676 GO:GO:0007140 Pfam:PF00567 GO:GO:0043046
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GO:GO:0008026 GO:GO:0071547 OMA:INDWFTI EMBL:GG666475
RefSeq:XP_002610548.1 GeneID:7220579 KEGG:bfo:BRAFLDRAFT_65715
eggNOG:NOG270748 Uniprot:C3XYZ4
Length = 1475
Score = 221 (82.9 bits), Expect = 7.6e-40, Sum P(4) = 7.6e-40
Identities = 61/184 (33%), Positives = 97/184 (52%)
Query: 159 EQTRQNLKRLNEDVIDYDLLE--DLVCHVDETCG--EGAILVFLPGVAEIHILLDRLA-A 213
E ++Q+ + + ++ +D LE + + E G G +LVFLPG+AEI+ L + LA
Sbjct: 355 EISQQSFELARKLILYFDQLEAQEQGRSISEGLGVNRGTVLVFLPGLAEINTLDELLAHE 414
Query: 214 SYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDC 273
+ R+ W+L LHS++ S +Q +VF+ P RKVI++TNIAE+SIT+ D+ YV D
Sbjct: 415 TTRY----KLWVLPLHSTITSEEQAQVFVPPRPHQRKVILSTNIAESSITVPDIKYVIDF 470
Query: 274 GRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQV 333
K + + S+ +W S V G Y + +R Y+ + Y +
Sbjct: 471 CLTKCMVCDPETNYQSLQLNWASQANCTQRKGRAGRVSSGRAYRMVSREFYDIHLPEYGI 530
Query: 334 PEMQ 337
PEMQ
Sbjct: 531 PEMQ 534
Score = 195 (73.7 bits), Expect = 7.6e-40, Sum P(4) = 7.6e-40
Identities = 44/92 (47%), Positives = 60/92 (65%)
Query: 10 KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 69
KN+ THVI+DEVHER DF L+V + LL S H +KV+LMSAT+DS++F+ Y
Sbjct: 253 KNMNQFTHVILDEVHERDQETDFALLVARKLLRSNSRH----VKVVLMSATLDSSMFAGY 308
Query: 70 F-----GD---CPVITAEGRTHPVTTYFLEDV 93
F G+ PV+T EGR PVT +++ED+
Sbjct: 309 FSIPVRGELAPAPVVTVEGRLFPVTEFYVEDL 340
Score = 145 (56.1 bits), Expect = 7.6e-40, Sum P(4) = 7.6e-40
Identities = 45/110 (40%), Positives = 57/110 (51%)
Query: 375 AISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKS 434
A+S G D +LT +G LA LPVDV +GK++L G +FG L +L I A LS KS
Sbjct: 537 ALSTDTSEGINPHDGDLTFIGRVLAALPVDVRVGKLLLLGHVFGYLKEVLVIGASLSLKS 596
Query: 435 PFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQ 484
F P R+K+A EG T SD L ++ AYKKWQ
Sbjct: 597 FFAKPFRGDLESYRSKMAWS----EG--------TFSDCLAMLNAYKKWQ 634
Score = 54 (24.1 bits), Expect = 7.6e-40, Sum P(4) = 7.6e-40
Identities = 33/126 (26%), Positives = 55/126 (43%)
Query: 469 TQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGL 528
T SD L ++ AYKKWQ + QQ + + M ++ M+ + + ++
Sbjct: 619 TFSDCLAMLNAYKKWQDCCQAGMFRNRQQ---ELEWAKRNMLQLKRMK-EMSAVAKELQ- 673
Query: 529 INLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNV---AATEQGV 585
L N N +++ L + D SQ N+ I+K +L YPN AA+++
Sbjct: 674 DRLANFNIRVSLERNPLVNHSRDTSQD-NL------ILKMVLAGAFYPNYFTCAASDEAE 726
Query: 586 AGAALS 591
A LS
Sbjct: 727 AVRDLS 732
Score = 41 (19.5 bits), Expect = 3.3e-28, Sum P(3) = 3.3e-28
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 390 ELTPLGHHLAKLPVDVLIGKMMLFGGIF 417
E PL +H D LI KM+L G +
Sbjct: 686 ERNPLVNHSRDTSQDNLILKMVLAGAFY 713
>POMBASE|SPBC1711.17 [details] [associations]
symbol:prp16 "ATP-dependent RNA helicase Prp16
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000350
"generation of catalytic spliceosome for second transesterification
step" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005681 "spliceosomal
complex" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC1711.17 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K12815 GO:GO:0000350 OMA:PSRSTWE PIR:T39724 RefSeq:NP_595890.2
ProteinModelPortal:Q9P774 IntAct:Q9P774 EnsemblFungi:SPBC1711.17.1
GeneID:2540006 KEGG:spo:SPBC1711.17 OrthoDB:EOG4GQTD2
NextBio:20801149 Uniprot:Q9P774
Length = 1173
Score = 319 (117.4 bits), Expect = 1.6e-39, Sum P(4) = 1.6e-39
Identities = 91/319 (28%), Positives = 156/319 (48%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSSDWLL 226
D ++ + + L H+ + G+ ILVF+ G +I I+ DRL + P +L
Sbjct: 682 DYVEAAVRQVLQIHLSQPAGD--ILVFMTGQEDIEATCEIIADRLNQLH--DAPRLS-IL 736
Query: 227 ALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKK 286
++S + + Q K+F +RKV++ATNIAETS+T+ + YV D G K YNS+
Sbjct: 737 PIYSQMPADLQAKIFDSAEPGVRKVVVATNIAETSLTVHGISYVVDTGYCKLKMYNSKLG 796
Query: 287 LSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCL 346
+ ++ IS PGI Y LYT Y + M +PE+QR L L
Sbjct: 797 IDTLQVTPISQANANQRAGRAGRTGPGIAYRLYTEMAYIREMFETTLPEIQRTNLSNTVL 856
Query: 347 QIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
+K L + I F ++ P + + ++ L+ +GA++ +LT LG ++ P+D
Sbjct: 857 ILKSLGVEEISDF--DFMDRPPNDTLMASLYELWTLGALDNFGKLTTLGKKMSLFPMDPS 914
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K+++ + C I++I + LS S F PK+ + + A+ +K
Sbjct: 915 LSKLIIIAEDYKCTEEIITIVSMLSVPSVFYRPKERAEESDAAR-----EKF-------- 961
Query: 467 SSTQSDHLVLMVAYKKWQK 485
+ +SDHL+L+ Y+ WQ+
Sbjct: 962 NVPESDHLMLLNIYQHWQR 980
Score = 140 (54.3 bits), Expect = 1.6e-39, Sum P(4) = 1.6e-39
Identities = 33/79 (41%), Positives = 49/79 (62%)
Query: 11 NLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYF 70
NL + +I+DE HERSL D L+ +LK +L ++ D +K+++ SAT++S FS +F
Sbjct: 602 NLEKYSVIIMDEAHERSLNTDILMGLLKKVLSRR--RD---IKLLVTSATMNSQKFSDFF 656
Query: 71 GDCPVITAEGRTHPVTTYF 89
G P T GRT+PV F
Sbjct: 657 GGAPQFTIPGRTYPVDIMF 675
Score = 83 (34.3 bits), Expect = 1.6e-39, Sum P(4) = 1.6e-39
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLA 524
+SDHL+L+ Y+ WQ+ G + +CSK+FL S + RD+R Q +++
Sbjct: 965 ESDHLMLLNIYQHWQR----NGY--SNSWCSKHFLHSKTLKRARDIRQQLVEIMS 1013
Score = 56 (24.8 bits), Expect = 1.6e-39, Sum P(4) = 1.6e-39
Identities = 14/48 (29%), Positives = 26/48 (54%)
Query: 615 HIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGG 662
H+H +S L + ++++ E V T+K ++ T V P+ + FGG
Sbjct: 1059 HLHVTSSLYGL-GYLPDYVIYHELVLTSKEYMNIVTSVDPYWLAEFGG 1105
>UNIPROTKB|I3L1L6 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 EMBL:AC004148 HGNC:HGNC:16718 ChiTaRS:DHX33
Ensembl:ENST00000572490 Uniprot:I3L1L6
Length = 617
Score = 313 (115.2 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 95/326 (29%), Positives = 149/326 (45%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLD--RLAASYRFGGPSSD 223
K+ D + L+ H + + ILVFL G EI + R A + G +
Sbjct: 174 KQPQNDYLHAALVSVFQIHQEAPSSQD-ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAM 232
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L L++S+ Q +VF P+ RKVII+TNIAETSITI + YV D G K +YN
Sbjct: 233 LVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNP 292
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
L + +S GICY LYT +EK + VPE+QR L
Sbjct: 293 DSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDK-MTVPEIQRCNLAS 351
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE---LTPLGHHLAK 400
+ LQ+ + + + F + P + I AI+ L +GA+E ++ LTP+G +A
Sbjct: 352 VMLQLLAMKVPNVLTF--DFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAA 409
Query: 401 LPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEG 460
P++ K +L F C IL+I + LS S P ++ V+ + +
Sbjct: 410 FPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFI------ 463
Query: 461 LSDSNDSSTQSDHLVLMVAYKKWQKI 486
S++ DH+ L+ Y+ ++ +
Sbjct: 464 -------SSEGDHMTLLNIYRTFKNL 482
Score = 164 (62.8 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 41/107 (38%), Positives = 59/107 (55%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L + VI+DE HER++ D L V+K +++ LKVI+MSAT+D +LFS+
Sbjct: 92 DSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQ 151
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASS 115
YF PV+ EGR HP+ ++ + + AL S I EA S
Sbjct: 152 YFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHA-ALVSVFQIHQEAPS 197
Score = 62 (26.9 bits), Expect = 1.7e-39, Sum P(3) = 1.7e-39
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 609 DGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
D + V IHPSS+ K +V+ E + TNK ++RD ++
Sbjct: 555 DTHQPVAIHPSSVLFHCKP---ACVVYTELLYTNKCYMRDLCVI 595
>RGD|1306942 [details] [associations]
symbol:Tdrd9 "tudor domain containing 9" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0007140 "male meiosis" evidence=ISO;ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009566
"fertilization" evidence=ISO;ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0031047 "gene silencing by RNA"
evidence=IEA] [GO:0034587 "piRNA metabolic process"
evidence=ISO;ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISO;ISS] [GO:0071547 "piP-body"
evidence=ISO;ISS] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
RGD:1306942 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0030154
GO:GO:0009566 GO:GO:0007283 GO:GO:0003676 GO:GO:0031047
GO:GO:0007140 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0043046 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0034587 eggNOG:COG1643 GeneTree:ENSGT00700000104393
GO:GO:0008026 GO:GO:0071547 CTD:122402 OrthoDB:EOG4F4S96
HOGENOM:HOG000047965 EMBL:AABR03050289 EMBL:AABR03048647
EMBL:AABR03049552 EMBL:AABR03049859 EMBL:AABR03050293
EMBL:AABR03051941 EMBL:BC104675 IPI:IPI00655293 IPI:IPI00895578
RefSeq:XP_001072421.2 UniGene:Rn.126122 STRING:Q3MHU3 PRIDE:Q3MHU3
Ensembl:ENSRNOT00000017118 GeneID:299343 KEGG:rno:299343
UCSC:RGD:1306942 NextBio:645254 Genevestigator:Q3MHU3
Uniprot:Q3MHU3
Length = 1384
Score = 363 (132.8 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 105/302 (34%), Positives = 149/302 (49%)
Query: 193 AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVI 252
++LVFLPG+ EI+ + + L + LHSSV +Q VFL P RK+I
Sbjct: 389 SVLVFLPGLGEINYMHELLTNMIH----KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKII 444
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKP 312
++TNIAE+S+T+ DV YV D + + S+ W S V
Sbjct: 445 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSK 504
Query: 313 GICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAI 372
G CY L R ++ + + VPEM R PL L++KLL +G + L+ AL PP I
Sbjct: 505 GYCYRLIHRDFWDSAIPDHVVPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDI 564
Query: 373 TTAISVLYEVGA--IEG---DE-----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
I +L EVGA + G DE ELT LG LA+LPV +GK+++ G +FGCL
Sbjct: 565 ERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDE 624
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
L I+A LS K+ F P + + R K+ S++SD L L+ A++
Sbjct: 625 CLIIAAALSLKNFFTMPFRQHLDGYRNKVHF------------SGSSRSDCLALVEAFRA 672
Query: 483 WQ 484
WQ
Sbjct: 673 WQ 674
Score = 145 (56.1 bits), Expect = 2.0e-39, Sum P(2) = 2.0e-39
Identities = 37/92 (40%), Positives = 51/92 (55%)
Query: 10 KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 69
K+L THV +DEVHER+ DFLL+V++ LL S +KVILMSAT++ F+ Y
Sbjct: 245 KSLMEFTHVFIDEVHERTEEMDFLLLVVRKLLRTNSRF----VKVILMSATINCKQFADY 300
Query: 70 FG--------DCPVITAEGRTHPVTTYFLEDV 93
F V EG+ H + Y+L D+
Sbjct: 301 FAVPVQNKMNPAYVFEVEGKPHTIEQYYLNDL 332
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 169 NEDVIDYDLLEDLVCHVDE 187
N +D DLL ++ C + E
Sbjct: 987 NRSHVDLDLLREIPCQLLE 1005
>WB|WBGene00018967 [details] [associations]
symbol:F56D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0040020
"regulation of meiosis" evidence=IMP] [GO:0040022 "feminization of
hermaphroditic germ-line" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 333 (122.3 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 92/289 (31%), Positives = 145/289 (50%)
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL--LA 227
+D ++ + + H+ E EG IL+FL G EI R+ + G + L +
Sbjct: 273 KDYLEAAIRTVIQIHMVEEV-EGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIP 331
Query: 228 LHSSVASVDQKKVFL-RPPEK-----IRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
L+S++ Q+++F PP + RK +I+TNIAETS+TID VV+V D G K+ Y
Sbjct: 332 LYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVY 391
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
N + ++ S++ IS KPG C+ LYT Y M+ PE+ R L
Sbjct: 392 NPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNL 451
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
+ LQ+K LG + ++PP E + A+ +L + AI D ELT LG +A+
Sbjct: 452 GSVVLQLK--KLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEF 509
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAK 450
P+D + KM++ C + ILSI+A LS ++ P + + + AK
Sbjct: 510 PLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAK 558
Score = 162 (62.1 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ ++K+++ ++ +KV++MSAT+D+ F RYF DCP+++
Sbjct: 201 LILDEAHERTLATDILMGLIKEIVRNRA-----DIKVVIMSATLDAGKFQRYFEDCPLLS 255
Query: 78 AEGRTHPVTTYF 89
GRT PV +F
Sbjct: 256 VPGRTFPVEIFF 267
Score = 47 (21.6 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 604 HPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
H V + V++HPS++ + + ++ E V T K F+R T V P
Sbjct: 653 HYVTVKDNQLVNLHPSTVLDH----KPEWALYNEFVLTTKNFIRTVTDVRP 699
>UNIPROTKB|Q20875 [details] [associations]
symbol:F56D2.6 "Putative pre-mRNA-splicing factor
ATP-dependent RNA helicase F56D2.6" species:6239 "Caenorhabditis
elegans" [GO:0030686 "90S preribosome" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005739
"mitochondrion" evidence=ISS] [GO:0006364 "rRNA processing"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0002009 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0016246
GO:GO:0008380 GO:GO:0006397 GO:GO:0040011 GO:GO:0003676
GO:GO:0042127 GO:GO:0040035 GO:GO:0007281 GO:GO:0040020
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0040022 HOGENOM:HOG000175261 EMBL:FO080358
KO:K12820 PIR:T16482 RefSeq:NP_741147.1 ProteinModelPortal:Q20875
SMR:Q20875 STRING:Q20875 PaxDb:Q20875 PRIDE:Q20875
EnsemblMetazoa:F56D2.6a.1 EnsemblMetazoa:F56D2.6a.2 GeneID:175771
KEGG:cel:CELE_F56D2.6 UCSC:F56D2.6a CTD:175771 WormBase:F56D2.6a
GeneTree:ENSGT00650000093246 InParanoid:Q20875 OMA:TVLQIHA
NextBio:889592 ArrayExpress:Q20875 Uniprot:Q20875
Length = 739
Score = 333 (122.3 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 92/289 (31%), Positives = 145/289 (50%)
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL--LA 227
+D ++ + + H+ E EG IL+FL G EI R+ + G + L +
Sbjct: 273 KDYLEAAIRTVIQIHMVEEV-EGDILLFLTGQEEIEEACKRIDREIQALGADAGALSCIP 331
Query: 228 LHSSVASVDQKKVFL-RPPEK-----IRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
L+S++ Q+++F PP + RK +I+TNIAETS+TID VV+V D G K+ Y
Sbjct: 332 LYSTLPPAAQQRIFEPAPPNRPNGAISRKCVISTNIAETSLTIDGVVFVIDPGFSKQKVY 391
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
N + ++ S++ IS KPG C+ LYT Y M+ PE+ R L
Sbjct: 392 NPRIRVESLLVCPISKASAMQRAGRAGRTKPGKCFRLYTETAYGSEMQDQTYPEILRSNL 451
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
+ LQ+K LG + ++PP E + A+ +L + AI D ELT LG +A+
Sbjct: 452 GSVVLQLK--KLGTEDLVHFDFMDPPAPETLMRALELLNYLQAINDDGELTELGSLMAEF 509
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAK 450
P+D + KM++ C + ILSI+A LS ++ P + + + AK
Sbjct: 510 PLDPQLAKMLITSTELNCSNEILSITAMLSVPQCWVRPNEMRTEADEAK 558
Score = 162 (62.1 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 30/72 (41%), Positives = 50/72 (69%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ ++K+++ ++ +KV++MSAT+D+ F RYF DCP+++
Sbjct: 201 LILDEAHERTLATDILMGLIKEIVRNRA-----DIKVVIMSATLDAGKFQRYFEDCPLLS 255
Query: 78 AEGRTHPVTTYF 89
GRT PV +F
Sbjct: 256 VPGRTFPVEIFF 267
Score = 47 (21.6 bits), Expect = 2.0e-39, Sum P(3) = 2.0e-39
Identities = 15/51 (29%), Positives = 25/51 (49%)
Query: 604 HPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
H V + V++HPS++ + + ++ E V T K F+R T V P
Sbjct: 653 HYVTVKDNQLVNLHPSTVLDH----KPEWALYNEFVLTTKNFIRTVTDVRP 699
>MGI|MGI:2445102 [details] [associations]
symbol:Dhx33 "DEAH (Asp-Glu-Ala-His) box polypeptide 33"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000182 "rDNA binding" evidence=ISO;IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IPI]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=ISO;IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:2445102
GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 GO:GO:0000182
GO:GO:0045943 HOVERGEN:HBG039428 GeneTree:ENSGT00700000104241
CTD:56919 OMA:APDYFRR ChiTaRS:DHX33 EMBL:AK035177 EMBL:BC052172
IPI:IPI00410764 RefSeq:NP_848144.3 UniGene:Mm.35399
ProteinModelPortal:Q80VY9 SMR:Q80VY9 PhosphoSite:Q80VY9
PRIDE:Q80VY9 Ensembl:ENSMUST00000108527 GeneID:216877
KEGG:mmu:216877 InParanoid:Q80VY9 NextBio:375442 Bgee:Q80VY9
CleanEx:MM_DHX33 Genevestigator:Q80VY9
GermOnline:ENSMUSG00000040620 Uniprot:Q80VY9
Length = 698
Score = 320 (117.7 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 97/326 (29%), Positives = 149/326 (45%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLD--RLAASYRFGGPSSD 223
K+ +D + L+ H + + ILVFL G EI + R A + G S
Sbjct: 255 KQPQQDYLHAALVSVFQIHQEAPASQD-ILVFLTGQEEIEAMSKTCRDIARHLPDGCPSM 313
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L L++S+ Q +VF P+ RKVII+TNIAETSITI + YV D G K +YN
Sbjct: 314 LVLPLYASLPYSQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNP 373
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
L + +S GICY LYT +EK + VPE+QR L
Sbjct: 374 DSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFEK-MTVPEIQRCNLAS 432
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE---LTPLGHHLAK 400
+ LQ+ + + + F + P + I AI+ L +GA+E ++ LTP+G +A
Sbjct: 433 VILQLLAMKVPNVLTF--DFMSKPSPDHIEAAIAQLDLLGALEHKDDQLTLTPIGRKMAA 490
Query: 401 LPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEG 460
P++ K +L F C IL+I + LS S P + V+ + +
Sbjct: 491 FPLEPRFAKTILLSSKFHCTEEILTIVSLLSVDSVLYNPPARRDEVQSVRKKFI------ 544
Query: 461 LSDSNDSSTQSDHLVLMVAYKKWQKI 486
S++ DH+ L+ Y+ ++ I
Sbjct: 545 -------SSEGDHITLLNIYRTFKNI 563
Score = 162 (62.1 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 40/105 (38%), Positives = 59/105 (56%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L + VI+DE HER++ D L V+K +++ LKVI+MSAT+D +LFS+
Sbjct: 173 DSLLRKYSCVILDEAHERTIHTDVLFGVVKTAQKRRKELGKLPLKVIVMSATMDVDLFSQ 232
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEA 113
YF PV+ EGR HP+ ++ + + + AL S I EA
Sbjct: 233 YFNRAPVLYLEGRQHPIQIFYTKQPQQDYLHA-ALVSVFQIHQEA 276
Score = 58 (25.5 bits), Expect = 3.1e-39, Sum P(3) = 3.1e-39
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 609 DGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
D + V IHPSS+ K +V+ + TNK ++RD +V
Sbjct: 636 DTHQPVAIHPSSVLFHCKP---ACVVYTSLLYTNKCYMRDLCVV 676
>UNIPROTKB|C9JR60 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
RefSeq:NP_001159773.1 UniGene:Hs.29403 GeneID:79665 KEGG:hsa:79665
CTD:79665 HGNC:HGNC:18018 ChiTaRS:DHX40 OrthoDB:EOG48PMJH
EMBL:AC091271 EMBL:AC004167 IPI:IPI00952676
ProteinModelPortal:C9JR60 STRING:C9JR60 Ensembl:ENST00000425628
ArrayExpress:C9JR60 Uniprot:C9JR60
Length = 702
Score = 295 (108.9 bits), Expect = 3.3e-39, Sum P(4) = 3.3e-39
Identities = 89/290 (30%), Positives = 142/290 (48%)
Query: 184 HVDETCGEGAILVFLPGVAEIHI---LLDRLAAS----YRFGGPSSDWLLAL--HSSVAS 234
H++E G+ ILVFL G EI LL ++A S Y + D LL L + S+ +
Sbjct: 190 HLNEMAGD--ILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTT 247
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q+++FL PP IRK +I+TNI+ TS+TID + YV D G K+ +N + L +
Sbjct: 248 DQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVP 307
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G C+ +Y++ + + M + +PE++R L + L +K L++
Sbjct: 308 ISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIH 367
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F L+PP E I A+ LY+ AI+ +T LG + + P+ + ++
Sbjct: 368 DVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 425
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D E Q + L K G +D
Sbjct: 426 ASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFND 475
Score = 176 (67.0 bits), Expect = 3.3e-39, Sum P(4) = 3.3e-39
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++ GD NLT + +I+DE HER+L D L +LK L +++S + LKV++MSAT++
Sbjct: 80 HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELA 139
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
S +FG+CP+ GR +PV F
Sbjct: 140 KLSAFFGNCPIFDIPGRLYPVREKF 164
Score = 67 (28.6 bits), Expect = 3.3e-39, Sum P(4) = 3.3e-39
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 609 DGRRE-VHIHPSS-INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
DGR VHIHPSS ++ Q E +++F E + T KV+ R IV P
Sbjct: 567 DGRGSPVHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR---IVCP 609
Score = 44 (20.5 bits), Expect = 3.3e-39, Sum P(4) = 3.3e-39
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
+++ LCAG + NVA G
Sbjct: 541 VLRRCLCAGYFKNVARRSVG 560
Score = 44 (20.5 bits), Expect = 2.6e-36, Sum P(3) = 2.6e-36
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 443 KQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
K+NV++ K + D L+ + ND + SD
Sbjct: 649 KENVKQLKDGISKDVLKKMQRRNDDKSISD 678
>ZFIN|ZDB-GENE-040426-1144 [details] [associations]
symbol:dhx38 "DEAH (Asp-Glu-Ala-His) box
polypeptide 38" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 ZFIN:ZDB-GENE-040426-1144 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 KO:K12815 CTD:9785 OrthoDB:EOG4Z62MS
EMBL:BC063744 IPI:IPI00493120 RefSeq:NP_957170.1 UniGene:Dr.38854
ProteinModelPortal:Q6P404 STRING:Q6P404 PRIDE:Q6P404 GeneID:393850
KEGG:dre:393850 NextBio:20814835 ArrayExpress:Q6P404 Bgee:Q6P404
Uniprot:Q6P404
Length = 1258
Score = 348 (127.6 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 92/321 (28%), Positives = 160/321 (49%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF--GGPSSD 223
K ED ++ + + L H+ G+ IL+F+PG +I + D++ P+
Sbjct: 748 KTPQEDYVEAAVKQALQIHLSGMVGD--ILIFMPGQEDIEVTSDQIVERLADLENAPALA 805
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L ++S + S Q K+F + P+ +RK I+ATNIAETS+T+D +++V D G K +N
Sbjct: 806 -VLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVVDSGYCKLKVFNP 864
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + ++ IS PG CY LYT+ ++ M +PE+QR L
Sbjct: 865 RIGMDALQVYPISQANANQRAGRAGRTGPGQCYRLYTQSAFKNEMLTTTIPEIQRTNLAN 924
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
+ L +K SLG + L ++PP E+ + ++ L+ +GA++ LTP G + + P+
Sbjct: 925 VVLLLK--SLGVQDLLLFHFMDPPPEDNMLNSMYQLWILGALDNTGALTPTGRLMVEFPL 982
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
D + KM++ C + IL I + LS S F PK ++ ++ + +K
Sbjct: 983 DPALSKMLIVSCDMSCSADILIIVSMLSVPSIFYRPKGREEESDQVR-----EKF----- 1032
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
S +SDHL + Y +W+
Sbjct: 1033 ---SVPESDHLTYLNVYLQWK 1050
Score = 141 (54.7 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 32/81 (39%), Positives = 51/81 (62%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + VI+DE HERSL D L +L++++ ++S LK+I+ SAT+DS+ F+
Sbjct: 671 ESDLDHYSAVIMDEAHERSLNTDVLFGLLREVVSRRS-----DLKLIVTSATMDSDKFAS 725
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+FG+ P+ GRT PV F
Sbjct: 726 FFGNVPIFHIPGRTFPVDILF 746
Score = 62 (26.9 bits), Expect = 3.6e-39, Sum P(3) = 3.6e-39
Identities = 13/57 (22%), Positives = 28/57 (49%)
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
S +SDHL + Y +W + + +C+ +F+ + M +R++R Q ++
Sbjct: 1033 SVPESDHLTYLNVYLQW------KNNNYSSIWCNDHFIHTKAMRKVREVRAQLKDIM 1083
Score = 44 (20.5 bits), Expect = 4.2e-29, Sum P(3) = 4.2e-29
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 21 DEVHERS-LLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAE 79
D + E+S DF K LLE++ ++ L++ D+N+ G+ T
Sbjct: 538 DHMKEKSEASSDFAK--KKTLLEQRQYLPIFAVRQQLLNIIRDNNIVI-VVGE----TGS 590
Query: 80 GRTHPVTTYFLEDVYES 96
G+T +T Y ED Y S
Sbjct: 591 GKTTQLTQYLHEDGYTS 607
>GENEDB_PFALCIPARUM|PF10_0294 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008380 "RNA splicing"
evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 338 (124.0 bits), Expect = 3.9e-39, Sum P(3) = 3.9e-39
Identities = 98/324 (30%), Positives = 159/324 (49%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPS 221
K D ++ L+ L H++E G+ ILVFL G EI+ IL +R+ P
Sbjct: 816 KEPESDYVEASLITVLNIHLNEHPGD--ILVFLTGQDEINTACEILHERMKKLESMSPPP 873
Query: 222 SDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
+L ++SS+ S Q +F P RK I+ATNIAE S+TID + +V D G K +Y
Sbjct: 874 LI-ILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKY 932
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
+S++ + S++ IS PG CY LYT Y+ M VPE+QR+ L
Sbjct: 933 DSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINL 992
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
+ L +K L + F ++ P E + ++ LY +GA++ + LT LG +A
Sbjct: 993 GSIVLLLKALGINDFLHF--DFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANF 1050
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGL 461
P++ + K++L F C +++I + LS ++ F P+++ ALL DK +
Sbjct: 1051 PMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNK---------ALLADKKK-- 1099
Query: 462 SDSNDSSTQSDHLVLMVAYKKWQK 485
+ Q D + + Y KW++
Sbjct: 1100 --NKFIMPQGDLITYLNIYNKWKE 1121
Score = 138 (53.6 bits), Expect = 3.9e-39, Sum P(3) = 3.9e-39
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +I+DE HER++ D L +LKD++ K++ K+I+ SAT+D+ FS
Sbjct: 739 DTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRA-----DFKLIVTSATLDAEKFST 793
Query: 69 YFGDCPVITAEGRTHPV 85
YF + P+ T G+ PV
Sbjct: 794 YFFNSPIFTIPGKIFPV 810
Score = 76 (31.8 bits), Expect = 3.9e-39, Sum P(3) = 3.9e-39
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 612 REVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
++V IHPSS L + F+V+ E V TNK ++RD TI+ P
Sbjct: 1203 QQVFIHPSST---LFNKNPLFVVYHELVLTNKEYIRDCTIIQP 1242
>UNIPROTKB|Q8IJA4 [details] [associations]
symbol:PF10_0294 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008380 "RNA splicing" evidence=ISS]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR003029
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00575 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS50126
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0008380 GO:GO:0003723 Gene3D:2.40.50.140 InterPro:IPR012340
SUPFAM:SSF50249 EMBL:AE014185 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 InterPro:IPR022967 SMART:SM00316 KO:K12818
HSSP:P05055 RefSeq:XP_001347578.1 ProteinModelPortal:Q8IJA4
IntAct:Q8IJA4 MINT:MINT-1724156 EnsemblProtists:PF10_0294:mRNA
GeneID:810451 KEGG:pfa:PF10_0294 EuPathDB:PlasmoDB:PF3D7_1030100
OMA:HRHSKEH ProtClustDB:CLSZ2433181 Uniprot:Q8IJA4
Length = 1290
Score = 338 (124.0 bits), Expect = 3.9e-39, Sum P(3) = 3.9e-39
Identities = 98/324 (30%), Positives = 159/324 (49%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPS 221
K D ++ L+ L H++E G+ ILVFL G EI+ IL +R+ P
Sbjct: 816 KEPESDYVEASLITVLNIHLNEHPGD--ILVFLTGQDEINTACEILHERMKKLESMSPPP 873
Query: 222 SDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
+L ++SS+ S Q +F P RK I+ATNIAE S+TID + +V D G K +Y
Sbjct: 874 LI-ILPIYSSLPSEMQSVIFEPAPPGCRKCILATNIAEASLTIDGIFFVIDPGFCKIKKY 932
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
+S++ + S++ IS PG CY LYT Y+ M VPE+QR+ L
Sbjct: 933 DSKRDMDSLIVAPISKANAKQRAGRAGRTGPGKCYRLYTEEAYKNEMSEMSVPEIQRINL 992
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
+ L +K L + F ++ P E + ++ LY +GA++ + LT LG +A
Sbjct: 993 GSIVLLLKALGINDFLHF--DFMDSPSVETLIHSLENLYYLGALDDNGYLTKLGKKMANF 1050
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGL 461
P++ + K++L F C +++I + LS ++ F P+++ ALL DK +
Sbjct: 1051 PMEPNLSKILLTSLNFNCTDDVVTIVSMLSVQNIFYRPQNK---------ALLADKKK-- 1099
Query: 462 SDSNDSSTQSDHLVLMVAYKKWQK 485
+ Q D + + Y KW++
Sbjct: 1100 --NKFIMPQGDLITYLNIYNKWKE 1121
Score = 138 (53.6 bits), Expect = 3.9e-39, Sum P(3) = 3.9e-39
Identities = 30/77 (38%), Positives = 47/77 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +I+DE HER++ D L +LKD++ K++ K+I+ SAT+D+ FS
Sbjct: 739 DTLLTKYSFIILDEAHERTISTDILFCLLKDVVRKRA-----DFKLIVTSATLDAEKFST 793
Query: 69 YFGDCPVITAEGRTHPV 85
YF + P+ T G+ PV
Sbjct: 794 YFFNSPIFTIPGKIFPV 810
Score = 76 (31.8 bits), Expect = 3.9e-39, Sum P(3) = 3.9e-39
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 612 REVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
++V IHPSS L + F+V+ E V TNK ++RD TI+ P
Sbjct: 1203 QQVFIHPSST---LFNKNPLFVVYHELVLTNKEYIRDCTIIQP 1242
>UNIPROTKB|Q9H6R0 [details] [associations]
symbol:DHX33 "Putative ATP-dependent RNA helicase DHX33"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0033613 "activating transcription factor binding" evidence=IEA]
[GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0000182
"rDNA binding" evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 EMBL:CH471108 GO:GO:0005654
GO:GO:0005730 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0000182 GO:GO:0045943 HOVERGEN:HBG039428
EMBL:AK025625 EMBL:AK026944 EMBL:AK295074 EMBL:AC004148
EMBL:BC030017 EMBL:CR936655 IPI:IPI00302860 IPI:IPI00655950
RefSeq:NP_001186628.1 RefSeq:NP_064547.2 UniGene:Hs.250456
ProteinModelPortal:Q9H6R0 SMR:Q9H6R0 IntAct:Q9H6R0
PhosphoSite:Q9H6R0 DMDM:296434478 PRIDE:Q9H6R0
Ensembl:ENST00000225296 GeneID:56919 KEGG:hsa:56919 UCSC:uc002gbz.3
CTD:56919 GeneCards:GC17M005360 HGNC:HGNC:16718 MIM:614405
neXtProt:NX_Q9H6R0 PharmGKB:PA27220 InParanoid:Q9H6R0 OMA:APDYFRR
OrthoDB:EOG46Q6S1 PhylomeDB:Q9H6R0 ChiTaRS:DHX33 GenomeRNAi:56919
NextBio:62420 ArrayExpress:Q9H6R0 Bgee:Q9H6R0 CleanEx:HS_DHX33
Genevestigator:Q9H6R0 GermOnline:ENSG00000005100 Uniprot:Q9H6R0
Length = 707
Score = 313 (115.2 bits), Expect = 5.3e-39, Sum P(3) = 5.3e-39
Identities = 95/326 (29%), Positives = 149/326 (45%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLD--RLAASYRFGGPSSD 223
K+ D + L+ H + + ILVFL G EI + R A + G +
Sbjct: 264 KQPQNDYLHAALVSVFQIHQEAPSSQD-ILVFLTGQEEIEAMSKTCRDIAKHLPDGCPAM 322
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L L++S+ Q +VF P+ RKVII+TNIAETSITI + YV D G K +YN
Sbjct: 323 LVLPLYASLPYAQQLRVFQGAPKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNP 382
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
L + +S GICY LYT +EK + VPE+QR L
Sbjct: 383 DSGLEVLAVQRVSKTQAWQRTGRAGREDSGICYRLYTEDEFEKFDK-MTVPEIQRCNLAS 441
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE---LTPLGHHLAK 400
+ LQ+ + + + F + P + I AI+ L +GA+E ++ LTP+G +A
Sbjct: 442 VMLQLLAMKVPNVLTF--DFMSKPSPDHIQAAIAQLDLLGALEHKDDQLTLTPMGRKMAA 499
Query: 401 LPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEG 460
P++ K +L F C IL+I + LS S P ++ V+ + +
Sbjct: 500 FPLEPKFAKTILMSPKFHCTEEILTIVSLLSVDSVLHNPPSRREEVQGVRKKFI------ 553
Query: 461 LSDSNDSSTQSDHLVLMVAYKKWQKI 486
S++ DH+ L+ Y+ ++ +
Sbjct: 554 -------SSEGDHMTLLNIYRTFKNL 572
Score = 164 (62.8 bits), Expect = 5.3e-39, Sum P(3) = 5.3e-39
Identities = 41/107 (38%), Positives = 59/107 (55%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L + VI+DE HER++ D L V+K +++ LKVI+MSAT+D +LFS+
Sbjct: 182 DSLLRKYSCVILDEAHERTIHTDVLFGVVKAAQKRRKELGKLPLKVIVMSATMDVDLFSQ 241
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASS 115
YF PV+ EGR HP+ ++ + + AL S I EA S
Sbjct: 242 YFNGAPVLYLEGRQHPIQVFYTKQPQNDYLHA-ALVSVFQIHQEAPS 287
Score = 62 (26.9 bits), Expect = 5.3e-39, Sum P(3) = 5.3e-39
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 609 DGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
D + V IHPSS+ K +V+ E + TNK ++RD ++
Sbjct: 645 DTHQPVAIHPSSVLFHCKP---ACVVYTELLYTNKCYMRDLCVI 685
>POMBASE|SPBC16H5.10c [details] [associations]
symbol:prp43 "ATP-dependent RNA helicase Prp43
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000390
"spliceosomal complex disassembly" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO;ISS] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=ISO] [GO:0006364 "rRNA
processing" evidence=ISS] [GO:0030686 "90S preribosome"
evidence=ISS] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 PomBase:SPBC16H5.10c GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0005681 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030686
GO:GO:0006364 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 GO:GO:0000390 KO:K12820 OMA:TVLQIHA
EMBL:AB027819 PIR:T39615 RefSeq:NP_595937.1
ProteinModelPortal:O42945 IntAct:O42945 STRING:O42945
EnsemblFungi:SPBC16H5.10c.1 GeneID:2540057 KEGG:spo:SPBC16H5.10c
OrthoDB:EOG4S7NZ4 NextBio:20801194 Uniprot:O42945
Length = 735
Score = 321 (118.1 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 86/283 (30%), Positives = 139/283 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAAS----YRFGGPSSDWLL 226
D ++ L L HV+E G G ILVFL G EI ++ R G +
Sbjct: 267 DYLEAALRTVLQIHVEE--GPGDILVFLTGEEEIEDACRKITLEADDLVREGAAGPLKVY 324
Query: 227 ALHSSVASVDQKKVFLRPPEKI-----RKVIIATNIAETSITIDDVVYVFDCGRHKENRY 281
L+ S+ Q+++F PE RKV+I+TNIAETS+TID +VYV D G K+ Y
Sbjct: 325 PLYGSLPPNQQQRIFEPTPEDTKSGYGRKVVISTNIAETSLTIDGIVYVVDPGFSKQKIY 384
Query: 282 NSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPL 341
N + ++ S++ IS +PG C+ LYT + K + PE+ R L
Sbjct: 385 NPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEEAFRKELIEQTYPEILRSNL 444
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
L++K L + + F ++PP E + A+ L + ++ + +LTPLG ++
Sbjct: 445 SSTVLELKKLGIDDLVHF--DYMDPPAPETMMRALEELNYLNCLDDNGDLTPLGRKASEF 502
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQ 444
P+D + M++ F C + +LS++A LS + F+ P ++
Sbjct: 503 PLDPNLAVMLIRSPEFYCSNEVLSLTALLSVPNVFVRPNSARK 545
Score = 164 (62.8 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 33/84 (39%), Positives = 54/84 (64%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L+ + +I+DE HER+L D L+ ++K L ++ P LK+I+MSAT+D+ F +
Sbjct: 185 DHMLSRYSCIILDEAHERTLATDILMGLMKRLATRR-----PDLKIIVMSATLDAKKFQK 239
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF D P++ GRT+PV Y+ ++
Sbjct: 240 YFFDAPLLAVPGRTYPVEIYYTQE 263
Score = 54 (24.1 bits), Expect = 5.6e-39, Sum P(3) = 5.6e-39
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 585 VAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKV 644
V+G + +KS+N K + D + V +HPS L S ++V+ E V T K
Sbjct: 631 VSGFFMQVAKKSANG--KNYVTMKDNQ-VVSLHPSC---GL-SVTPEWVVYNEFVLTTKS 683
Query: 645 FLRDTTIVSP 654
F+R+ T + P
Sbjct: 684 FIRNVTAIRP 693
Score = 44 (20.5 bits), Expect = 4.5e-09, Sum P(3) = 4.5e-09
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 205 HILLDRLAASYRFGGPSSDWL---LALHSSVASVDQ-KKVFLRPPEKIRKVIIAT 255
H+ L + +Y+ G ++DW H ++ S D +K R E+ +I+T
Sbjct: 561 HLTLLNVYHAYKSGEGTADWCWNHFLSHRALISADNVRKQLRRTMERQEVELIST 615
>ZFIN|ZDB-GENE-080507-1 [details] [associations]
symbol:dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide
40" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
ZFIN:ZDB-GENE-080507-1 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GeneTree:ENSGT00700000104421
EMBL:CR848791 EMBL:CU861501 IPI:IPI00507978
Ensembl:ENSDART00000101707 Uniprot:E7F7R7
Length = 734
Score = 319 (117.4 bits), Expect = 5.9e-39, Sum P(3) = 5.9e-39
Identities = 88/271 (32%), Positives = 139/271 (51%)
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRL-----AASYRFG--GPSSDWLL--ALHSSVAS 234
H +E G+ ILVFL G +EI D L YR+ S D LL +L+ S+ +
Sbjct: 232 HTNEAAGD--ILVFLTGQSEIEKACDLLFEKAEILDYRYDVHDRSVDGLLILSLYGSMPT 289
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q+++F P+ +RK ++ATNIA TS+TID + Y+ D G K+ +NS+ L +
Sbjct: 290 DQQRQIFQPAPKGVRKCVVATNIAATSLTIDGIRYIVDSGFVKQLNHNSRVGLDILEVVP 349
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G C+ +Y++ ++ M Y +PE+QR L + L +K L +
Sbjct: 350 ISKSEAQQRAGRAGRTAAGKCFRIYSKDFWDTCMPEYTIPEIQRTSLTSVILTLKCLGVH 409
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F L+ P+E I TA+ LY+ AI+ E+T LG + + P+ + + +L
Sbjct: 410 DVIRF--PYLDCPEERFILTALKQLYQYDAIDRRGEVTKLGRLMVEFPLPPNLTRALLKA 467
Query: 415 GIFGCLSPILSISAFLSYKSPFIYP-KDEKQ 444
GC +L ++A LS ++ FI P K EKQ
Sbjct: 468 AALGCEDIMLPVAAMLSVENIFIRPGKPEKQ 498
Score = 178 (67.7 bits), Expect = 5.9e-39, Sum P(3) = 5.9e-39
Identities = 39/81 (48%), Positives = 53/81 (65%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT + VI+DE HERSL D LL +LK L K S + LKV++MSAT+++ S
Sbjct: 126 DPSLTQYSIVILDEAHERSLNTDVLLGLLKKTLLKGSRGNKTPLKVVVMSATLETEKLSS 185
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
++G+CPV T GRT+PV F
Sbjct: 186 FYGNCPVFTIPGRTYPVKETF 206
Score = 42 (19.8 bits), Expect = 5.9e-39, Sum P(3) = 5.9e-39
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 561 NHSSIVKAILCAGLYPNVAATEQG 584
+ S +++ LC G + NVA G
Sbjct: 579 SRSELLRQCLCLGYFTNVARRSIG 602
>TAIR|locus:2095989 [details] [associations]
symbol:AT3G62310 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009560 "embryo sac egg
cell differentiation" evidence=RCA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005829 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0005730 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL162507 KO:K12820
ProtClustDB:CLSN2683587 OMA:TVLQIHA EMBL:AY120782 EMBL:BT010331
IPI:IPI00540868 PIR:T48023 RefSeq:NP_191790.1 UniGene:At.34140
UniGene:At.4777 ProteinModelPortal:Q9LZQ9 SMR:Q9LZQ9 IntAct:Q9LZQ9
PaxDb:Q9LZQ9 PRIDE:Q9LZQ9 EnsemblPlants:AT3G62310.1 GeneID:825404
KEGG:ath:AT3G62310 TAIR:At3g62310 InParanoid:Q9LZQ9
PhylomeDB:Q9LZQ9 ArrayExpress:Q9LZQ9 Genevestigator:Q9LZQ9
Uniprot:Q9LZQ9
Length = 726
Score = 346 (126.9 bits), Expect = 6.3e-39, Sum P(3) = 6.3e-39
Identities = 87/270 (32%), Positives = 140/270 (51%)
Query: 192 GAILVFLPGVAEIHILLDRLAASY-RFG---GPSSDWLLALHSSVASVDQKKVFLRPPEK 247
G ILVFL G EI ++ G GP ++ L+S++ Q+K+F PE
Sbjct: 276 GDILVFLTGEEEIEDACRKINKEVGNLGDQVGPIK--VVPLYSTLPPAMQQKIFDPAPEP 333
Query: 248 I-------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXX 300
+ RK++++TNIAETS+TID +VYV D G K+ YN + ++ S++ IS
Sbjct: 334 VTEGGPPGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASA 393
Query: 301 XXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFL 360
+PG C+ LYT + ++P PE+ R L L +K L + + F
Sbjct: 394 HQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF- 452
Query: 361 SKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCL 420
++PP E + A+ VL +GA++ D LT G +++ P+D + KM++ F C
Sbjct: 453 -DFMDPPAPETLMRALEVLNYLGALDDDGNLTKTGEIMSEFPLDPQMAKMLIVSPEFNCS 511
Query: 421 SPILSISAFLSYKSPFIYPKDEKQNVERAK 450
+ ILS+SA LS + FI P++ ++ + AK
Sbjct: 512 NEILSVSAMLSVPNCFIRPREAQKAADEAK 541
Score = 145 (56.1 bits), Expect = 6.3e-39, Sum P(3) = 6.3e-39
Identities = 28/75 (37%), Positives = 48/75 (64%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L +LK++L+ + P LK+++MSAT+++ F YF P++
Sbjct: 184 IILDEAHERTLATDVLFGLLKEVLKNR-----PDLKLVVMSATLEAEKFQDYFSGAPLMK 238
Query: 78 AEGRTHPVTTYFLED 92
GR HPV ++ ++
Sbjct: 239 VPGRLHPVEIFYTQE 253
Score = 44 (20.5 bits), Expect = 6.3e-39, Sum P(3) = 6.3e-39
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTT 650
VH+HPS+ + ++++ E V T++ F+R T
Sbjct: 646 VHLHPSNCLDH----KPEWVIYNEYVLTSRNFIRTVT 678
>ASPGD|ASPL0000006947 [details] [associations]
symbol:AN5827 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:BN001301 EMBL:AACD01000100 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12813
OMA:RIDDHRD OrthoDB:EOG4SBJ63 RefSeq:XP_663431.1
ProteinModelPortal:Q5B0V3 EnsemblFungi:CADANIAT00007219
GeneID:2871194 KEGG:ani:AN5827.2 Uniprot:Q5B0V3
Length = 1128
Score = 383 (139.9 bits), Expect = 7.5e-39, Sum P(3) = 7.5e-39
Identities = 110/342 (32%), Positives = 166/342 (48%)
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYR-FGGPSSDWLLA-LHSSVASVDQKKVF 241
HV + G G ILVFL G EI L + R G + ++ +++++ S Q K+F
Sbjct: 685 HVSQ--GPGDILVFLTGQEEIEAAEQSLQETARKLGNKIPEMIICPIYANLPSDLQAKIF 742
Query: 242 LRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXX 301
P K RKV++ATNIAETS+TID +VYV D G KEN +N + + S+V S
Sbjct: 743 EPTPPKARKVVLATNIAETSLTIDGIVYVIDPGFVKENVFNPRTGMESLVVTPCSRASAN 802
Query: 302 XXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLS 361
V PG C+ LYT+ Y + PE+QR L + L +K L + ++ F
Sbjct: 803 QRAGRAGRVGPGKCFRLYTKWAYYNELEESTTPEIQRTNLSSVILMLKSLGIDQLLEF-- 860
Query: 362 KALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLS 421
++PP E I A+ LY +GA+ ELT +G +A+ P D ++ K +L GC+
Sbjct: 861 DFMDPPPAETIIRALEQLYALGALNDRGELTKIGRQMAEFPTDPMLAKAILAADKHGCVE 920
Query: 422 PILSISAFLSYKSP-FIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAY 480
+LSI + L S F PKD+K + + A+ T K +G DHL L+ +
Sbjct: 921 EVLSIVSMLGEASALFFRPKDKKIHADSARNRF-TVK-DG----------GDHLTLLNIW 968
Query: 481 KKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTL 522
+W + + + + FL + RD+R Q L
Sbjct: 969 NQWVD------SDFSYVWAKENFLQQRSLTRARDVRDQLAKL 1004
Score = 117 (46.2 bits), Expect = 7.5e-39, Sum P(3) = 7.5e-39
Identities = 29/102 (28%), Positives = 52/102 (50%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+++DE HER++ D +LKD+ + + P LK+++ SAT+D+ F YF + P+
Sbjct: 599 LMIDEAHERTVPTDIACGLLKDIAKAR-----PDLKLLISSATMDAQKFQSYFDNAPIFN 653
Query: 78 AEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGP 119
GR + V ++ + NY L +A ++ GP
Sbjct: 654 IPGRMYNVDIHYTQQ--PEANY---LAAAITTVFQIHVSQGP 690
Score = 42 (19.8 bits), Expect = 7.5e-39, Sum P(3) = 7.5e-39
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
I KAI AG +PN A ++G
Sbjct: 1023 IQKAIT-AGFFPNAARLQRG 1041
Score = 41 (19.5 bits), Expect = 5.9e-31, Sum P(3) = 5.9e-31
Identities = 6/10 (60%), Positives = 8/10 (80%)
Query: 134 WGDDSLLSEE 143
WGD+ +L EE
Sbjct: 185 WGDEEILEEE 194
>UNIPROTKB|Q8IX18 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOVERGEN:HBG039428 EMBL:AF461690 EMBL:AF260270
EMBL:AK025713 EMBL:AK095681 EMBL:BC024187 EMBL:AL832510
EMBL:AF319521 IPI:IPI00410110 IPI:IPI00797226 IPI:IPI01010408
RefSeq:NP_001159773.1 RefSeq:NP_078888.4 UniGene:Hs.29403
ProteinModelPortal:Q8IX18 SMR:Q8IX18 IntAct:Q8IX18 STRING:Q8IX18
PhosphoSite:Q8IX18 DMDM:116247771 PaxDb:Q8IX18 PRIDE:Q8IX18
DNASU:79665 Ensembl:ENST00000251241 GeneID:79665 KEGG:hsa:79665
UCSC:uc002ixn.2 CTD:79665 GeneCards:GC17P057642 HGNC:HGNC:18018
HPA:HPA044350 MIM:607570 neXtProt:NX_Q8IX18 PharmGKB:PA27227
InParanoid:Q8IX18 OMA:LYGSMPT PhylomeDB:Q8IX18 ChiTaRS:DHX40
GenomeRNAi:79665 NextBio:68866 ArrayExpress:Q8IX18 Bgee:Q8IX18
CleanEx:HS_DHX40 Genevestigator:Q8IX18 GermOnline:ENSG00000108406
Uniprot:Q8IX18
Length = 779
Score = 295 (108.9 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 89/290 (30%), Positives = 142/290 (48%)
Query: 184 HVDETCGEGAILVFLPGVAEIHI---LLDRLAAS----YRFGGPSSDWLLAL--HSSVAS 234
H++E G+ ILVFL G EI LL ++A S Y + D LL L + S+ +
Sbjct: 267 HLNEMAGD--ILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTT 324
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q+++FL PP IRK +I+TNI+ TS+TID + YV D G K+ +N + L +
Sbjct: 325 DQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVP 384
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G C+ +Y++ + + M + +PE++R L + L +K L++
Sbjct: 385 ISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIH 444
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F L+PP E I A+ LY+ AI+ +T LG + + P+ + ++
Sbjct: 445 DVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 502
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D E Q + L K G +D
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFND 552
Score = 176 (67.0 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++ GD NLT + +I+DE HER+L D L +LK L +++S + LKV++MSAT++
Sbjct: 157 HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELA 216
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
S +FG+CP+ GR +PV F
Sbjct: 217 KLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 67 (28.6 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 609 DGRRE-VHIHPSS-INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
DGR VHIHPSS ++ Q E +++F E + T KV+ R IV P
Sbjct: 644 DGRGSPVHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR---IVCP 686
Score = 44 (20.5 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
+++ LCAG + NVA G
Sbjct: 618 VLRRCLCAGYFKNVARRSVG 637
Score = 44 (20.5 bits), Expect = 5.1e-36, Sum P(3) = 5.1e-36
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 443 KQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
K+NV++ K + D L+ + ND + SD
Sbjct: 726 KENVKQLKDGISKDVLKKMQRRNDDKSISD 755
>UNIPROTKB|Q08DS9 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
HOVERGEN:HBG039428 GeneTree:ENSGT00700000104421 CTD:79665
OMA:LYGSMPT EMBL:DAAA02048338 EMBL:BC123581 IPI:IPI00715479
RefSeq:NP_001070365.1 UniGene:Bt.63706 Ensembl:ENSBTAT00000023753
GeneID:533484 KEGG:bta:533484 InParanoid:Q08DS9 NextBio:20876051
Uniprot:Q08DS9
Length = 779
Score = 295 (108.9 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 89/290 (30%), Positives = 142/290 (48%)
Query: 184 HVDETCGEGAILVFLPGVAEIHI---LLDRLAAS----YRFGGPSSDWLLAL--HSSVAS 234
H++E G+ ILVFL G EI LL ++A S Y + D LL L + S+ +
Sbjct: 267 HLNEMAGD--ILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTT 324
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q+++FL PP IRK +I+TNI+ TS+TID + YV D G K+ +N + L +
Sbjct: 325 DQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVP 384
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G C+ +Y++ + + M + +PE++R L + L +K L++
Sbjct: 385 ISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIH 444
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F L+PP E I A+ LY+ AI+ +T LG + + P+ + ++
Sbjct: 445 DVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 502
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D E Q + L K G +D
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFND 552
Score = 176 (67.0 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++ GD NLT + +I+DE HER+L D L +LK L +++S + LKV++MSAT++
Sbjct: 157 HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELA 216
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
S +FG+CP+ GR +PV F
Sbjct: 217 KLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 67 (28.6 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 609 DGRRE-VHIHPSS-INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
DGR VHIHPSS ++ Q E +++F E + T KV+ R IV P
Sbjct: 644 DGRGSPVHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR---IVCP 686
Score = 44 (20.5 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
+++ LCAG + NVA G
Sbjct: 618 VLRRCLCAGYFKNVARRSVG 637
Score = 39 (18.8 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 443 KQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
K+NV+ K + + L+ + ND + SD
Sbjct: 726 KENVKHRKDGISKEVLKKMQRRNDDKSISD 755
>UNIPROTKB|F1S235 [details] [associations]
symbol:LOC100519272 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:CU694896
RefSeq:XP_003131712.1 Ensembl:ENSSSCT00000019229 GeneID:100519272
KEGG:ssc:100519272 Uniprot:F1S235
Length = 779
Score = 295 (108.9 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 89/290 (30%), Positives = 142/290 (48%)
Query: 184 HVDETCGEGAILVFLPGVAEIHI---LLDRLAAS----YRFGGPSSDWLLAL--HSSVAS 234
H++E G+ ILVFL G EI LL ++A S Y + D LL L + S+ +
Sbjct: 267 HLNEMAGD--ILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTT 324
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q+++FL PP IRK +I+TNI+ TS+TID + YV D G K+ +N + L +
Sbjct: 325 DQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVP 384
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G C+ +Y++ + + M + +PE++R L + L +K L++
Sbjct: 385 ISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIH 444
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F L+PP E I A+ LY+ AI+ +T LG + + P+ + ++
Sbjct: 445 DVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 502
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D E Q + L K G +D
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFND 552
Score = 176 (67.0 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++ GD NLT + +I+DE HER+L D L +LK L +++S + LKV++MSAT++
Sbjct: 157 HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELA 216
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
S +FG+CP+ GR +PV F
Sbjct: 217 KLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 67 (28.6 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 609 DGRRE-VHIHPSS-INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
DGR VHIHPSS ++ Q E +++F E + T KV+ R IV P
Sbjct: 644 DGRGSPVHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR---IVCP 686
Score = 44 (20.5 bits), Expect = 8.0e-39, Sum P(4) = 8.0e-39
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
+++ LCAG + NVA G
Sbjct: 618 VLRRCLCAGYFKNVARRSVG 637
Score = 39 (18.8 bits), Expect = 1.7e-35, Sum P(3) = 1.7e-35
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 443 KQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
K+NV+ K + + L+ + ND + SD
Sbjct: 726 KENVKHLKDGISKEVLKKMQRRNDDKSISD 755
>UNIPROTKB|Q8NDG6 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0031047 "gene silencing by
RNA" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0034587
"piRNA metabolic process" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0043046 "DNA methylation involved in gamete
generation" evidence=ISS] [GO:0009566 "fertilization" evidence=ISS]
[GO:0007140 "male meiosis" evidence=ISS] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0009566 GO:GO:0007283 GO:GO:0003676
GO:GO:0031047 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0034587 eggNOG:COG1643 GO:GO:0008026
GO:GO:0071547 EMBL:AL136001 OMA:INDWFTI EMBL:AL132712 EMBL:AL833915
EMBL:AK093483 EMBL:AK097429 EMBL:AK097699 EMBL:AK125978
EMBL:BC016796 EMBL:BC128057 IPI:IPI00384419 IPI:IPI00413613
PIR:G02632 RefSeq:NP_694591.2 UniGene:Hs.21454
ProteinModelPortal:Q8NDG6 SMR:Q8NDG6 STRING:Q8NDG6
PhosphoSite:Q8NDG6 DMDM:290457664 PaxDb:Q8NDG6 PRIDE:Q8NDG6
Ensembl:ENST00000339063 Ensembl:ENST00000409874 GeneID:122402
KEGG:hsa:122402 UCSC:uc001yom.4 UCSC:uc001yon.4 CTD:122402
GeneCards:GC14P104394 HGNC:HGNC:20122 HPA:HPA038120
neXtProt:NX_Q8NDG6 PharmGKB:PA134890186 InParanoid:Q8NDG6
OrthoDB:EOG4F4S96 GenomeRNAi:122402 NextBio:80877 Bgee:Q8NDG6
CleanEx:HS_TDRD9 Genevestigator:Q8NDG6 Uniprot:Q8NDG6
Length = 1382
Score = 361 (132.1 bits), Expect = 8.5e-39, Sum P(3) = 8.5e-39
Identities = 105/302 (34%), Positives = 153/302 (50%)
Query: 193 AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVI 252
++LVFLPG+ EI+ + + L + + LHSSVA +Q VFL P RK+I
Sbjct: 387 SVLVFLPGLGEINYMHELLTSLVH----KRLQVYPLHSSVALEEQNNVFLSPVPGYRKII 442
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKP 312
++TNIAE+S+T+ DV YV D + + S+ W S V
Sbjct: 443 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSR 502
Query: 313 GICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAI 372
G CY L + ++ + + VPEM R PL L++KLL +G + L+ AL PP I
Sbjct: 503 GYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDI 562
Query: 373 TTAISVLYEVGA--IEG---DE-----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
I +L EVGA + G DE ELT LG LA+LPV+ +GK+++ G +FGCL
Sbjct: 563 ERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDE 622
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
L I+A LS K+ F P + + R K+ G S++SD + L+ A+K
Sbjct: 623 CLIIAAALSLKNFFAMPFRQHLDGYRNKV-----NFSG-------SSKSDCIALVEAFKT 670
Query: 483 WQ 484
W+
Sbjct: 671 WK 672
Score = 147 (56.8 bits), Expect = 8.5e-39, Sum P(3) = 8.5e-39
Identities = 40/99 (40%), Positives = 56/99 (56%)
Query: 10 KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 69
K+L TH+I+DEVHER+ DFLL+V++ LL S +KV+LMSAT+ F+ Y
Sbjct: 243 KSLMEFTHIIIDEVHERTEEMDFLLLVVRKLLRTNSRF----VKVVLMSATISCKEFADY 298
Query: 70 FGDCPV---------ITAEGRTHPVTTYFLEDVYESINY 99
F PV EG+ H V Y+L D+ E I++
Sbjct: 299 FA-VPVQNKMNPAYIFEVEGKPHSVEEYYLNDL-EHIHH 335
Score = 40 (19.1 bits), Expect = 8.5e-39, Sum P(3) = 8.5e-39
Identities = 15/55 (27%), Positives = 21/55 (38%)
Query: 571 CAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVH-IHPSSINSQ 624
C L P A Q +A L L S K P W++ E + + P + Q
Sbjct: 1304 CKCLGPERVAQLQDIARQKLLGLFCQSKPREKIVPKWHEKPYEWNQVDPKLVMEQ 1358
>ASPGD|ASPL0000059403 [details] [associations]
symbol:AN0133 species:162425 "Emericella nidulans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
[GO:0000390 "spliceosomal complex disassembly" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0071014 "post-mRNA release
spliceosomal complex" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000004 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 KO:K12820
OMA:TVLQIHA OrthoDB:EOG4S7NZ4 RefSeq:XP_657737.1 STRING:Q5BH47
EnsemblFungi:CADANIAT00002613 GeneID:2875910 KEGG:ani:AN0133.2
Uniprot:Q5BH47
Length = 769
Score = 314 (115.6 bits), Expect = 9.3e-39, Sum P(3) = 9.3e-39
Identities = 96/322 (29%), Positives = 154/322 (47%)
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAAS----YRFGGPSSDWL 225
+D ++ + L H E EG IL+FL G EI +++ R +
Sbjct: 290 QDYVEAAIRTVLQIHATED--EGDILLFLTGEEEIEDAARKISLEGDEMIREADAGPLKV 347
Query: 226 LALHSSVASVDQKKVF--LRPPEKI-----RKVIIATNIAETSITIDDVVYVFDCGRHKE 278
L+ S+ Q+++F PP + RKVI++TNIAETS+TID +VYV D G K+
Sbjct: 348 YTLYGSLPPHMQQRIFEPAPPPRRPGGRPGRKVIVSTNIAETSLTIDGIVYVVDPGFSKQ 407
Query: 279 NRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQR 338
YN + ++ S++ IS +PG C+ LYT ++K + PE+ R
Sbjct: 408 KIYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTESAFKKELIDQTYPEILR 467
Query: 339 MPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHL 398
L L++K L + + F ++PP E + A+ L + ++ D LTPLG
Sbjct: 468 SNLSSTVLELKKLGIDDLVHF--DLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLA 525
Query: 399 AKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKL 458
++ P+D + M++ F C + ILSI+A LS F+ P +++ RA D++
Sbjct: 526 SEFPLDPALAVMLISSPEFYCSNEILSITALLSVPQIFVRPASQRK---RA------DEM 576
Query: 459 EGLSDSNDSSTQSDHLVLMVAY 480
+ L D DHL L+ AY
Sbjct: 577 KNLFAHPDG----DHLTLLNAY 594
Score = 177 (67.4 bits), Expect = 9.3e-39, Sum P(3) = 9.3e-39
Identities = 33/81 (40%), Positives = 55/81 (67%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L+ + +I+DE HER++ D L+ +LK++++++ P LK+I+MSAT+D+ F R
Sbjct: 209 DHELSRYSTIILDEAHERTMSTDVLMGLLKEVVQRR-----PDLKIIIMSATLDAQKFQR 263
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF D P++ GRTHPV ++
Sbjct: 264 YFNDAPLLAVPGRTHPVEIFY 284
Score = 150 (57.9 bits), Expect = 1.4e-20, Sum P(3) = 1.4e-20
Identities = 47/171 (27%), Positives = 82/171 (47%)
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
++L LG + ++PP E + A+ L + ++ D LTPLG ++ P+D +
Sbjct: 475 LELKKLGIDDLVHFDLMDPPAPETLMRALEELNYLACLDDDGNLTPLGRLASEFPLDPAL 534
Query: 408 GKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDS 467
M++ F C + ILSI+A LS F+ P +++ RA D+++ L D
Sbjct: 535 AVMLISSPEFYCSNEILSITALLSVPQIFVRPASQRK---RA------DEMKNLFAHPDG 585
Query: 468 STQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQ 518
DHL L+ AY ++ + K Q+C +FLS + ++R+Q
Sbjct: 586 ----DHLTLLNAYHAFKSPEAQENPK---QWCHDHFLSLRSLQSADNVRMQ 629
Score = 48 (22.0 bits), Expect = 9.3e-39, Sum P(3) = 9.3e-39
Identities = 17/80 (21%), Positives = 34/80 (42%)
Query: 575 YPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLV 634
Y N+ + + + K N + D + V +HPS++ + + +++
Sbjct: 652 YENI---RRALCAGFFMQVAKKENQGKSMYMTIKD-HQNVLLHPSTVLAH----DAEWVL 703
Query: 635 FLEKVETNKVFLRDTTIVSP 654
+ E V T K ++R T V P
Sbjct: 704 YNEFVLTTKNYIRTVTAVKP 723
Score = 40 (19.1 bits), Expect = 6.4e-38, Sum P(3) = 6.4e-38
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 566 VKAILCAGLYPNVAATE-QG 584
++ LCAG + VA E QG
Sbjct: 655 IRRALCAGFFMQVAKKENQG 674
>UNIPROTKB|G4MTU4 [details] [associations]
symbol:MGG_11351 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp16" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K12815 RefSeq:XP_003713740.1 EnsemblFungi:MGG_11351T0
GeneID:5051310 KEGG:mgr:MGG_11351 Uniprot:G4MTU4
Length = 999
Score = 337 (123.7 bits), Expect = 1.1e-38, Sum P(4) = 1.1e-38
Identities = 89/317 (28%), Positives = 156/317 (49%)
Query: 170 EDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASY-RFGGPSSDWLLAL 228
ED +D + + L HV + G G ILVF+ G +I + + + P +L +
Sbjct: 492 EDYVDQAVQQVLNIHV--SMGTGDILVFMTGQEDIEVTCELVRERLDALNDPPKLSILPI 549
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
+S + + Q K+F R P +RK I+ATNIAETS+T+D ++YV D G K YN + +
Sbjct: 550 YSQMPADLQAKIFDRAPPGVRKCIVATNIAETSLTVDGIMYVVDAGYSKLKVYNPKMGMD 609
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
++ IS PG + L+T ++ + +PE+QR L L I
Sbjct: 610 TLQITPISQANASQRSGRAGRTGPGKAFRLFTEKAFKDELYIQTIPEIQRTNLSNTILLI 669
Query: 349 KLLSLGRIKIFLS-KALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
K SLG +K L ++PP ++ +TT++ L+ +GA++ ++T LG + P+D +
Sbjct: 670 K--SLG-VKDMLDFDFMDPPPQDTMTTSLFDLWALGALDNLGDMTDLGRKMNFFPMDPPL 726
Query: 408 GKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDS 467
K+++ +GC +++I + LS + F PK+ ++ + A+
Sbjct: 727 AKLIIMAEEYGCTEEMITIVSMLSVPNVFYRPKERQEESDAAREKFFVP----------- 775
Query: 468 STQSDHLVLMVAYKKWQ 484
+SDHL + Y +W+
Sbjct: 776 --ESDHLTFLHVYSQWK 790
Score = 129 (50.5 bits), Expect = 1.1e-38, Sum P(4) = 1.1e-38
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L+ + K +L+++ D LK+I+ SAT+++ FS +FG P T
Sbjct: 420 IIMDEAHERALNTDVLMGLFKKILQRR--RD---LKLIVTSATMNAKRFSDFFGGAPDFT 474
Query: 78 AEGRTHPVTTYF 89
GRT PV F
Sbjct: 475 IPGRTFPVDVMF 486
Score = 61 (26.5 bits), Expect = 1.1e-38, Sum P(4) = 1.1e-38
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQ 518
+SDHL + Y +W+ G A +CS++FL S + +++R Q
Sbjct: 776 ESDHLTFLHVYSQWKA----NGHSDA--WCSRHFLHSKSLRRAKEVRDQ 818
Score = 56 (24.8 bits), Expect = 1.1e-38, Sum P(4) = 1.1e-38
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGG 662
V +HP+S L F ++V+ E + T+K ++ T V P + GG
Sbjct: 870 VQLHPTSALYGL-GFLPDYVVYHELILTSKEYMSTVTSVDPMWLADLGG 917
Score = 37 (18.1 bits), Expect = 3.3e-29, Sum P(4) = 3.3e-29
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 77 TAEGRTHPVTTYFLEDVY 94
T G+T +T + ED Y
Sbjct: 328 TGSGKTTQLTQFLYEDGY 345
>UNIPROTKB|J9NVQ3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AAEX03006584
EMBL:AAEX03006585 Ensembl:ENSCAFT00000048714 Uniprot:J9NVQ3
Length = 857
Score = 295 (108.9 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 89/290 (30%), Positives = 142/290 (48%)
Query: 184 HVDETCGEGAILVFLPGVAEIHI---LLDRLAAS----YRFGGPSSDWLLAL--HSSVAS 234
H++E G+ ILVFL G EI LL ++A S Y + D LL L + S+ +
Sbjct: 345 HLNEMAGD--ILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTT 402
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q+++FL PP IRK +I+TNI+ TS+TID + YV D G K+ +N + L +
Sbjct: 403 DQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVP 462
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G C+ +Y++ + + M + +PE++R L + L +K L++
Sbjct: 463 ISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIH 522
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F L+PP E I A+ LY+ AI+ +T LG + + P+ + ++
Sbjct: 523 DVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 580
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D E Q + L K G +D
Sbjct: 581 ASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFND 630
Score = 176 (67.0 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++ GD NLT + +I+DE HER+L D L +LK L +++S + LKV++MSAT++
Sbjct: 235 HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELA 294
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
S +FG+CP+ GR +PV F
Sbjct: 295 KLSAFFGNCPIFDIPGRLYPVREKF 319
Score = 67 (28.6 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 609 DGRRE-VHIHPSS-INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
DGR VHIHPSS ++ Q E +++F E + T KV+ R IV P
Sbjct: 722 DGRGSPVHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR---IVCP 764
Score = 44 (20.5 bits), Expect = 1.7e-38, Sum P(4) = 1.7e-38
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
+++ LCAG + NVA G
Sbjct: 696 VLRRCLCAGYFKNVARRSVG 715
Score = 39 (18.8 bits), Expect = 2.9e-35, Sum P(3) = 2.9e-35
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 443 KQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
K+NV+ K + + L+ + ND + SD
Sbjct: 804 KENVKHLKDGISKEVLKRMQRRNDDKSISD 833
>RGD|1359618 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
RGD:1359618 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT
OrthoDB:EOG48PMJH EMBL:BC083821 IPI:IPI00369962
RefSeq:NP_001005873.1 UniGene:Rn.29182 ProteinModelPortal:Q5XI69
PhosphoSite:Q5XI69 Ensembl:ENSRNOT00000006926 GeneID:287595
KEGG:rno:287595 InParanoid:Q5XI69 NextBio:626568
ArrayExpress:Q5XI69 Genevestigator:Q5XI69
GermOnline:ENSRNOG00000004549 Uniprot:Q5XI69
Length = 779
Score = 297 (109.6 bits), Expect = 2.4e-38, Sum P(4) = 2.4e-38
Identities = 90/290 (31%), Positives = 142/290 (48%)
Query: 184 HVDETCGEGAILVFLPGVAEIHI---LLDRLAAS----YRFGGPSSDWLLAL--HSSVAS 234
H++E G+ ILVFL G EI LL ++A S Y + D LL L + S+ +
Sbjct: 267 HLNEMAGD--ILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTT 324
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q+++FL PP IRK +I+TNI+ TS+TID + YV D G K+ +N + L +
Sbjct: 325 DQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVP 384
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G C+ +Y++ + + M + +PE++R L + L +K L++
Sbjct: 385 ISKSEALQRSGRAGRTASGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIH 444
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F L+PP E I A+ LY+ AI+ +T LG + + P+ + ++
Sbjct: 445 DVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRA 502
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D E Q K L K G +D
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQKHRELAAKAGGFND 552
Score = 169 (64.5 bits), Expect = 2.4e-38, Sum P(4) = 2.4e-38
Identities = 34/85 (40%), Positives = 52/85 (61%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++ GD NL + +I+DE HER+L D L +LK L + +S + LKV++MSAT++
Sbjct: 157 HILGDPNLNKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELA 216
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
S +FG+CP+ GR +PV F
Sbjct: 217 KLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 67 (28.6 bits), Expect = 2.4e-38, Sum P(4) = 2.4e-38
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 609 DGRRE-VHIHPSS-INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
DGR VHIHPSS ++ Q E +++F E + T KV+ R IV P
Sbjct: 644 DGRGSPVHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR---IVCP 686
Score = 44 (20.5 bits), Expect = 2.4e-38, Sum P(4) = 2.4e-38
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
+++ LCAG + NVA G
Sbjct: 618 VLRRCLCAGYFKNVARRSVG 637
Score = 41 (19.5 bits), Expect = 3.3e-35, Sum P(3) = 3.3e-35
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 443 KQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKI 486
K+NV++ K + + L+ + ND + SD + +K Q+I
Sbjct: 726 KENVKQLKDGISKEVLKKMQRRNDDKSISDARARFLE-RKQQRI 768
>MGI|MGI:1914737 [details] [associations]
symbol:Dhx40 "DEAH (Asp-Glu-Ala-His) box polypeptide 40"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 MGI:MGI:1914737
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 EMBL:AL592222 HOVERGEN:HBG039428
GeneTree:ENSGT00700000104421 CTD:79665 OMA:LYGSMPT EMBL:AK004610
EMBL:AK010512 EMBL:AK031000 EMBL:AK075991 EMBL:AL596111
EMBL:BC058276 IPI:IPI00453964 RefSeq:NP_080467.3 UniGene:Mm.260627
ProteinModelPortal:Q6PE54 SMR:Q6PE54 STRING:Q6PE54
PhosphoSite:Q6PE54 PaxDb:Q6PE54 PRIDE:Q6PE54
Ensembl:ENSMUST00000018569 GeneID:67487 KEGG:mmu:67487
UCSC:uc007ktc.1 InParanoid:Q6PE54 OrthoDB:EOG48PMJH NextBio:324718
Bgee:Q6PE54 CleanEx:MM_DHX40 Genevestigator:Q6PE54
GermOnline:ENSMUSG00000018425 Uniprot:Q6PE54
Length = 779
Score = 295 (108.9 bits), Expect = 3.3e-38, Sum P(4) = 3.3e-38
Identities = 89/290 (30%), Positives = 142/290 (48%)
Query: 184 HVDETCGEGAILVFLPGVAEIHI---LLDRLAAS----YRFGGPSSDWLLAL--HSSVAS 234
H++E G+ ILVFL G EI LL ++A S Y + D LL L + S+ +
Sbjct: 267 HLNEMAGD--ILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTT 324
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q+++FL PP IRK +I+TNI+ TS+TID + YV D G K+ +N + L +
Sbjct: 325 DQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVP 384
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G C+ +Y++ + + M + +PE++R L + L +K L++
Sbjct: 385 ISKSEALQRSGRAGRTASGKCFRIYSKEFWSQCMPDHVIPEIKRTSLTSVVLTLKCLAIH 444
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F L+PP E I A+ LY+ AI+ +T LG + + P+ + ++
Sbjct: 445 DVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIRA 502
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D E Q + L K G +D
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFND 552
Score = 170 (64.9 bits), Expect = 3.3e-38, Sum P(4) = 3.3e-38
Identities = 34/85 (40%), Positives = 53/85 (62%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++ GD NL+ + +I+DE HER+L D L +LK L + +S + LKV++MSAT++
Sbjct: 157 HILGDPNLSKFSVIILDEAHERTLTTDILFGLLKKLFQDKSPNRKEHLKVVVMSATMELA 216
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
S +FG+CP+ GR +PV F
Sbjct: 217 KLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 67 (28.6 bits), Expect = 3.3e-38, Sum P(4) = 3.3e-38
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 609 DGRRE-VHIHPSS-INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
DGR VHIHPSS ++ Q E +++F E + T KV+ R IV P
Sbjct: 644 DGRGSPVHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR---IVCP 686
Score = 44 (20.5 bits), Expect = 3.3e-38, Sum P(4) = 3.3e-38
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
+++ LCAG + NVA G
Sbjct: 618 VLRRCLCAGYFKNVARRSVG 637
Score = 41 (19.5 bits), Expect = 4.4e-35, Sum P(3) = 4.4e-35
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 443 KQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKI 486
K+NV++ K + + L+ + ND + SD + +K Q+I
Sbjct: 726 KENVKQLKDGISKEVLKKMQRRNDDKSISDARARFLE-RKQQRI 768
>UNIPROTKB|G4NHA6 [details] [associations]
symbol:MGG_03893 "Pre-mRNA-splicing factor ATP-dependent
RNA helicase prp43" species:242507 "Magnaporthe oryzae 70-15"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:CM001236 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K12820 RefSeq:XP_003719983.1
EnsemblFungi:MGG_03893T0 GeneID:2677480 KEGG:mgr:MGG_03893
Uniprot:G4NHA6
Length = 779
Score = 306 (112.8 bits), Expect = 6.7e-38, Sum P(3) = 6.7e-38
Identities = 104/355 (29%), Positives = 165/355 (46%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIH-------ILLDRLAASYRFGGPSSD 223
D I+ + L H E EG IL+FL G EI + +D L G P
Sbjct: 299 DYIEASVRTVLQIHATEA--EGDILLFLTGEEEIEDVCRKVRLEVDELIRDADCG-PME- 354
Query: 224 WLLALHSSVASVDQKKVF--LRPPEKI-----RKVIIATNIAETSITIDDVVYVFDCGRH 276
+ L+ ++ Q+K+F PP K RK I+ATNIAETS+TID +VYV D G
Sbjct: 355 -VYPLYGTLPPQQQQKIFNAAPPPLKKGGRPGRKCIVATNIAETSLTIDGIVYVVDPGFS 413
Query: 277 KENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEM 336
K+ YN++ ++ S++ IS +PG C+ LYT ++K + PE+
Sbjct: 414 KQKIYNARIRVESLLVTPISRASAQQRAGRAGRTRPGKCFRLYTEAAFKKELIEQTYPEI 473
Query: 337 QRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGH 396
R L L++K L + + F ++PP E + A+ L + + D +LT LGH
Sbjct: 474 LRSNLSNTILELKKLGVDDLVHF--DFMDPPAPETMMRALEELNYLSCLNDDGDLTDLGH 531
Query: 397 HLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTD 456
++ P+D + M++ F C + +LS+++ LS F+ P + ++ + K
Sbjct: 532 MASEYPLDPALAVMLVSSPEFYCSNEMLSVTSLLSVPQVFMRPANNRKRADEMKEHF--K 589
Query: 457 KLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAA----QQFCSKYFLSSS 507
+EG DHL L+ AY ++ + K GT + F S LSS+
Sbjct: 590 HMEG-----------DHLTLLNAYHAFKSEMAK-GTDMKKWCHEHFLSYRHLSSA 632
Score = 176 (67.0 bits), Expect = 6.7e-38, Sum P(3) = 6.7e-38
Identities = 35/81 (43%), Positives = 53/81 (65%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D N+T + +I+DE HER+L D L+ +LK L ++S LK+I+MSAT+D+ F R
Sbjct: 217 DPNMTRYSCIIIDEAHERTLATDILMALLKQLSLRRS-----DLKIIIMSATLDAAKFQR 271
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF + P++ GRTHPV ++
Sbjct: 272 YFFEAPILAVPGRTHPVEIFY 292
Score = 50 (22.7 bits), Expect = 6.7e-38, Sum P(3) = 6.7e-38
Identities = 12/43 (27%), Positives = 26/43 (60%)
Query: 612 REVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
+ V +HPSS+ + ++ ++++ E V T+K ++R T + P
Sbjct: 693 QNVMLHPSSVLTT----DYEWVLYHEFVLTSKQYIRTVTGIRP 731
>UNIPROTKB|Q9KS77 [details] [associations]
symbol:VC1382 "ATP-dependent helicase HrpA" species:243277
"Vibrio cholerae O1 biovar El Tor str. N16961" [GO:0004386
"helicase activity" evidence=ISS] [GO:0008152 "metabolic process"
evidence=ISS] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 324 (119.1 bits), Expect = 6.7e-38, Sum P(2) = 6.7e-38
Identities = 90/282 (31%), Positives = 145/282 (51%)
Query: 174 DYDLLEDLVCHVDETCGEGA--ILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSS 231
D D LE + VDE C EG IL+F+ G EI D L S R ++ L++
Sbjct: 282 DRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADAL--SKR--NLRDTEIVPLYAR 337
Query: 232 VASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMV 291
+++ +Q K+F P R++++ATN+AETS+T+ + YV D G + +RY+ + K+ +
Sbjct: 338 LSAGEQNKIF--QPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 395
Query: 292 EDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRP-YQVPEMQRMPLVELCLQIKL 350
+ IS + GIC LY+ + L RP + PE+ R L + LQ+
Sbjct: 396 IEPISQASANQRKGRCGRTEEGICIRLYSEEDF--LSRPEFTDPEILRTNLASVILQMTA 453
Query: 351 LSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGD-----EELTPLGHHLAKLPVDV 405
L LG I+ F +E P + I + +L E+GAI + LT G LA+LP+D
Sbjct: 454 LGLGDIEAF--PFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDP 511
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVE 447
+ +M+L GCL ++ I++ LS + P P D++Q+ +
Sbjct: 512 RLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSAD 553
Score = 171 (65.3 bits), Expect = 6.7e-38, Sum P(2) = 6.7e-38
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q D+ L +I+DE HERSL DF+L LK LL ++ P LKVI+ SAT+D
Sbjct: 192 IQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRR-----PDLKVIITSATIDPER 246
Query: 66 FSRYFGDCPVITAEGRTHPV 85
FS++F + P+I GRT+PV
Sbjct: 247 FSKHFSNAPIIEVSGRTYPV 266
>TIGR_CMR|VC_1382 [details] [associations]
symbol:VC_1382 "ATP-dependent helicase HrpA" species:686
"Vibrio cholerae O1 biovar El Tor" [GO:0004386 "helicase activity"
evidence=ISS] [GO:0008152 "metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GenomeReviews:AE003852_GR GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 InterPro:IPR024590 Pfam:PF11898
TIGRFAMs:TIGR01967 EMBL:AE004217 PIR:F82207 RefSeq:NP_231026.2
ProteinModelPortal:Q9KS77 DNASU:2614836 GeneID:2614836
KEGG:vch:VC1382 PATRIC:20081832 Uniprot:Q9KS77
Length = 1309
Score = 324 (119.1 bits), Expect = 6.7e-38, Sum P(2) = 6.7e-38
Identities = 90/282 (31%), Positives = 145/282 (51%)
Query: 174 DYDLLEDLVCHVDETCGEGA--ILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSS 231
D D LE + VDE C EG IL+F+ G EI D L S R ++ L++
Sbjct: 282 DRDQLEGIFQAVDELCDEGLGDILIFMNGEREIRDTADAL--SKR--NLRDTEIVPLYAR 337
Query: 232 VASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMV 291
+++ +Q K+F P R++++ATN+AETS+T+ + YV D G + +RY+ + K+ +
Sbjct: 338 LSAGEQNKIF--QPHAGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 395
Query: 292 EDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRP-YQVPEMQRMPLVELCLQIKL 350
+ IS + GIC LY+ + L RP + PE+ R L + LQ+
Sbjct: 396 IEPISQASANQRKGRCGRTEEGICIRLYSEEDF--LSRPEFTDPEILRTNLASVILQMTA 453
Query: 351 LSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGD-----EELTPLGHHLAKLPVDV 405
L LG I+ F +E P + I + +L E+GAI + LT G LA+LP+D
Sbjct: 454 LGLGDIEAF--PFVEAPDKRNIQDGVRLLEELGAINDQIKDPKKRLTESGKQLARLPIDP 511
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVE 447
+ +M+L GCL ++ I++ LS + P P D++Q+ +
Sbjct: 512 RLARMVLEASKLGCLKEVMIIASALSIQDPRERPSDKQQSAD 553
Score = 171 (65.3 bits), Expect = 6.7e-38, Sum P(2) = 6.7e-38
Identities = 37/80 (46%), Positives = 51/80 (63%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q D+ L +I+DE HERSL DF+L LK LL ++ P LKVI+ SAT+D
Sbjct: 192 IQNDRFLNQYDTIIIDEAHERSLNIDFILGYLKQLLPRR-----PDLKVIITSATIDPER 246
Query: 66 FSRYFGDCPVITAEGRTHPV 85
FS++F + P+I GRT+PV
Sbjct: 247 FSKHFSNAPIIEVSGRTYPV 266
>UNIPROTKB|D6RA70 [details] [associations]
symbol:YTHDC2 "Probable ATP-dependent RNA helicase YTHDC2"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR002110
InterPro:IPR001374 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF01424 PROSITE:PS50088
PROSITE:PS51061 PROSITE:PS51194 SMART:SM00248 SMART:SM00490
GO:GO:0005524 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC093208
EMBL:AC010389 HGNC:HGNC:24721 IPI:IPI00964960
ProteinModelPortal:D6RA70 SMR:D6RA70 Ensembl:ENST00000515883
UCSC:uc010jcf.2 HOGENOM:HOG000205632 ArrayExpress:D6RA70
Bgee:D6RA70 Uniprot:D6RA70
Length = 739
Score = 250 (93.1 bits), Expect = 9.0e-38, Sum P(2) = 9.0e-38
Identities = 53/130 (40%), Positives = 84/130 (64%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDR-LAASYRFGGPSSDW-LL 226
+++ +D DL+ L+ ++ +C GA+L+FLPG EI L DR L RF + + +
Sbjct: 600 DDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQVF 659
Query: 227 ALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKK 286
LHS++ + DQKKV PP +RK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 660 MLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNF 719
Query: 287 LSSMVEDWIS 296
++ + WIS
Sbjct: 720 VTMLKMVWIS 729
Score = 240 (89.5 bits), Expect = 9.0e-38, Sum P(2) = 9.0e-38
Identities = 52/94 (55%), Positives = 61/94 (64%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLL L+DLL+K H P LK+IL SA +D NL
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQK---H--PTLKLILSSAALDVNL 355
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F RYFG CPVI +GR V FLED+ + Y
Sbjct: 356 FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 389
Score = 40 (19.1 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 11/41 (26%), Positives = 20/41 (48%)
Query: 200 GVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
G EI LL+ +A+ FG L+ + S S + +++
Sbjct: 551 GQTEIVDLLESYSATLEFGNLDESSLVQTNGSDLSAEDREL 591
>UNIPROTKB|F1NWS9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007140 "male meiosis" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0034587 "piRNA metabolic process" evidence=IEA]
[GO:0043046 "DNA methylation involved in gamete generation"
evidence=IEA] [GO:0071547 "piP-body" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 InterPro:IPR002999
GO:GO:0005524 GO:GO:0005634 GO:GO:0009566 GO:GO:0003676
GO:GO:0004386 GO:GO:0007140 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0071547 OMA:INDWFTI
EMBL:AADN02003787 IPI:IPI00574259 Ensembl:ENSGALT00000018863
Uniprot:F1NWS9
Length = 1180
Score = 342 (125.4 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 101/302 (33%), Positives = 148/302 (49%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDW-LLALHSSVASVDQKKVFLRPPEKIRK 250
G++LVFLPG EI + L + + W + LHS V+ +Q VFL P RK
Sbjct: 192 GSVLVFLPGFCEISYMHSCLTRMF-----NKKWQVYPLHSRVSLEEQNNVFLNPVPGYRK 246
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXV 310
VI++TNIAE+S+T+ DV YV D + + + S+ W S V
Sbjct: 247 VILSTNIAESSVTVPDVKYVIDFCLTRTLFCDEETNYQSLRLCWASKTNCYQRRGRAGRV 306
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
G CY L + + + +PEM PL L+IK L +G K L+ AL PP
Sbjct: 307 SNGYCYRLVHKDFWTDCIPEKSLPEMLICPLGATVLKIKKLDMGEPKALLATALSPPNVS 366
Query: 371 AITTAISVLYEVGAI--------EGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
I I L E+GA+ + D ELT LG+ L LPVD+ +GK+++ G +FGCL
Sbjct: 367 DIERTILHLKELGALTACVQAEDQRDGELTFLGNVLVHLPVDLHLGKLIVLGHVFGCLEE 426
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
L I+A LS ++ + P + + R+KL S +S +SD + ++ A+K
Sbjct: 427 CLIIAAALSLRNFIVEPFKQPIDGYRSKLFF----------SGNS--KSDCIAIVNAFKA 474
Query: 483 WQ 484
WQ
Sbjct: 475 WQ 476
Score = 150 (57.9 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 38/100 (38%), Positives = 59/100 (59%)
Query: 10 KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 69
K+LT TH+ VDEVHER+ DFLL+V++ LL S +K+ILMSAT++ + Y
Sbjct: 49 KSLTEFTHIFVDEVHERTEDMDFLLLVIRKLLRTNSQ----SVKIILMSATINCEEIADY 104
Query: 70 F------GDCP--VITAEGRTHPVTTYFLEDVYESINYRL 101
F G P + EG+ + V Y+L+D+ I++++
Sbjct: 105 FAIPTQNGLNPACIFKVEGKPYAVEEYYLDDLKHVIHFQI 144
Score = 44 (20.5 bits), Expect = 1.1e-37, Sum P(3) = 1.1e-37
Identities = 21/56 (37%), Positives = 27/56 (48%)
Query: 612 REVHIHPSSINSQL--KSFEHP---FLV--FLEKVETNK-VFLRDTTIVSPFSILL 659
R I SINS + + EH FLV FL E VFL +T+++ P LL
Sbjct: 975 RSAVIRKGSINSVVVQDAPEHSSEQFLVAAFLSLNENGSTVFLEETSLMPPIPGLL 1030
>UNIPROTKB|F1S666 [details] [associations]
symbol:F1S666 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR007502 Pfam:PF04408 SMART:SM00847 GO:GO:0004386
InterPro:IPR011709 Pfam:PF07717 GeneTree:ENSGT00550000074257
EMBL:CU914751 Ensembl:ENSSSCT00000016942 Uniprot:F1S666
Length = 410
Score = 305 (112.4 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 79/234 (33%), Positives = 119/234 (50%)
Query: 294 WISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSL 353
W S V+PG C+ L +R R+++L + PEM R PL E+ L IKLL L
Sbjct: 8 WASKTNLEQRKGRAGRVRPGFCFHLCSRARFDRL-ETHMTPEMFRTPLHEIALSIKLLRL 66
Query: 354 GRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLF 413
G I FL+KA+EPP +A+ A L E+ A++ ++ELTPLG LAKLP++ GKMM+
Sbjct: 67 GGIGQFLAKAIEPPPLDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIM 126
Query: 414 GGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDH 473
G IF I +ISA + PFI E +L + G + SDH
Sbjct: 127 GCIFYVGDAICTISAATCFPEPFIS--------EGKRLGYIHRNFAG-------NRFSDH 171
Query: 474 LVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIG 527
+ L+ ++ W + G +A +FC L+ + + M + ++Q +L + G
Sbjct: 172 VALLSVFQAWDDARMG-GEEAEIRFCEHKRLNMATLRMTWEAKVQLKEILINSG 224
Score = 133 (51.9 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
Identities = 32/105 (30%), Positives = 54/105 (51%)
Query: 609 DGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLFGGSI 664
+GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LLF S
Sbjct: 272 EGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLLFA-SK 329
Query: 665 NVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
VQ V +D W+++ + A LR + +++ ++ + P
Sbjct: 330 KVQSDGQIVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQP 374
Score = 40 (19.1 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 126 KKNLVLSGWGDDSLLSEEYIN 146
K+ L+ SG+ +D LL++ + N
Sbjct: 217 KEILINSGFPEDCLLTQVFTN 237
>FB|FBgn0033160 [details] [associations]
symbol:CG11107 species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0000398
"mRNA splicing, via spliceosome" evidence=IC;ISS] [GO:0005681
"spliceosomal complex" evidence=ISS] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0022008
"neurogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AE013599
GO:GO:0005524 GO:GO:0022008 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0004004 GO:GO:0016779 KO:K12820 GeneTree:ENSGT00650000093246
OMA:TVLQIHA EMBL:AY058484 RefSeq:NP_610269.1 UniGene:Dm.4189
SMR:Q7K3M5 STRING:Q7K3M5 EnsemblMetazoa:FBtr0088966 GeneID:35654
KEGG:dme:Dmel_CG11107 UCSC:CG11107-RA FlyBase:FBgn0033160
InParanoid:Q7K3M5 OrthoDB:EOG4D254T GenomeRNAi:35654 NextBio:794560
Uniprot:Q7K3M5
Length = 729
Score = 326 (119.8 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 85/269 (31%), Positives = 138/269 (51%)
Query: 191 EGAILVFLPGVAEIHILLDRLAASY-RFGGPSSDW-LLALHSSVASVDQKKVFL-RPPEK 247
EG IL+FL G EI R+ G + + L+S++ Q+++F PP
Sbjct: 282 EGDILMFLTGQEEIEEACKRIKREIDNLGSEIGELKCIPLYSTLPPNLQQRIFEPAPPPN 341
Query: 248 I-----RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXX 302
RKV+++TNIAETS+TID VV+V D G K+ YN + ++ S++ IS
Sbjct: 342 ANGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQ 401
Query: 303 XXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
+PG C+ LYT ++ M+ PE+ R L + LQ+K L + + F
Sbjct: 402 RSGRAGRTRPGKCFRLYTEKAFKNEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHF--D 459
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP E + A+ +L + A++ D LT LG +++ P+D + KM++ C +
Sbjct: 460 FMDPPAPETLMRALELLNYLAALDDDGNLTDLGAVMSEFPLDPQLAKMLIASCQHNCSNE 519
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKL 451
ILSI+A LS F+ P + K+ + AK+
Sbjct: 520 ILSITAMLSVPQCFVRPNEAKKAADEAKM 548
Score = 155 (59.6 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 29/72 (40%), Positives = 50/72 (69%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+++DE HER+L D L+ VLK+++ ++S LK+++MSAT+D+ F +YF + P++
Sbjct: 190 ILLDEAHERTLATDILMGVLKEVIRQRS-----DLKLVVMSATLDAGKFQQYFDNAPLMK 244
Query: 78 AEGRTHPVTTYF 89
GRTHPV ++
Sbjct: 245 VPGRTHPVEIFY 256
Score = 43 (20.2 bits), Expect = 1.7e-37, Sum P(3) = 1.7e-37
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 612 REVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
+ V +HPS+ + ++++ E V T K ++R T V P
Sbjct: 650 QNVQLHPSTCLDH----KPDWVIYNEFVLTTKNYIRTVTDVKP 688
>TAIR|locus:2065210 [details] [associations]
symbol:AT2G47250 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009941 "chloroplast envelope" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00382
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0016020 GO:GO:0008380
GO:GO:0006397 GO:GO:0009941 GO:GO:0003676 EMBL:AC002337
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
EMBL:AY128301 EMBL:BT004534 IPI:IPI00540033 PIR:H84912
RefSeq:NP_182247.1 UniGene:At.36388 ProteinModelPortal:O22899
SMR:O22899 PaxDb:O22899 PRIDE:O22899 EnsemblPlants:AT2G47250.1
GeneID:819338 KEGG:ath:AT2G47250 GeneFarm:1798 TAIR:At2g47250
InParanoid:O22899 KO:K12820 OMA:XEIDEAC PhylomeDB:O22899
ProtClustDB:CLSN2683587 Genevestigator:O22899 GermOnline:AT2G47250
Uniprot:O22899
Length = 729
Score = 333 (122.3 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 84/270 (31%), Positives = 139/270 (51%)
Query: 192 GAILVFLPGVAEIHILLDRLAASY-RFG---GPSSDWLLALHSSVASVDQKKVFLRPPEK 247
G ILVFL G EI ++ G GP ++ L+S++ Q+K+F P
Sbjct: 280 GDILVFLTGEEEIEDACRKINKEVSNLGDQVGPVK--VVPLYSTLPPAMQQKIFDPAPVP 337
Query: 248 I-------RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXX 300
+ RK++++TNIAETS+TID +VYV D G K+ YN + ++ S++ IS
Sbjct: 338 LTEGGPAGRKIVVSTNIAETSLTIDGIVYVIDPGFAKQKVYNPRIRVESLLVSPISKASA 397
Query: 301 XXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFL 360
+PG C+ LYT + ++P PE+ R L L +K L + + F
Sbjct: 398 HQRSGRAGRTRPGKCFRLYTEKSFNNDLQPQTYPEILRSNLANTVLTLKKLGIDDLVHF- 456
Query: 361 SKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCL 420
++PP E + A+ VL +GA++ + LT G +++ P+D + KM++ F C
Sbjct: 457 -DFMDPPAPETLMRALEVLNYLGALDDEGNLTKTGEIMSEFPLDPQMSKMLIVSPEFNCS 515
Query: 421 SPILSISAFLSYKSPFIYPKDEKQNVERAK 450
+ ILS+SA LS + F+ P++ ++ + AK
Sbjct: 516 NEILSVSAMLSVPNCFVRPREAQKAADEAK 545
Score = 146 (56.5 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 28/75 (37%), Positives = 47/75 (62%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L +LK++L + P LK+++MSAT+++ F YF P++
Sbjct: 188 IILDEAHERTLATDVLFGLLKEVLRNR-----PDLKLVVMSATLEAEKFQEYFSGAPLMK 242
Query: 78 AEGRTHPVTTYFLED 92
GR HPV ++ ++
Sbjct: 243 VPGRLHPVEIFYTQE 257
Score = 43 (20.2 bits), Expect = 2.2e-37, Sum P(3) = 2.2e-37
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTT 650
VH+HPS+ + ++++ E V T + F+R T
Sbjct: 650 VHLHPSNCLDH----KPEWVIYNEYVLTTRNFIRTVT 682
>TAIR|locus:2197965 [details] [associations]
symbol:AT1G26370 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 EMBL:CP002684
GO:GO:0005524 GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
IPI:IPI00532541 RefSeq:NP_173961.3 UniGene:At.15978
ProteinModelPortal:F4IE66 SMR:F4IE66 PRIDE:F4IE66
EnsemblPlants:AT1G26370.1 GeneID:839179 KEGG:ath:AT1G26370
OMA:ADISTNI Uniprot:F4IE66
Length = 717
Score = 337 (123.7 bits), Expect = 3.1e-37, Sum P(4) = 3.1e-37
Identities = 109/369 (29%), Positives = 176/369 (47%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLL---A 227
D +D L+ H +E G+ ILVFL G EI + +RL P L A
Sbjct: 273 DYVDATLVTIFQIHFEEKPGD--ILVFLTGQDEIESV-ERLVQERLQNIPEDKRKLLPLA 329
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+ S++ S Q KVF P RKVI+ATNIAETSITI + YV D G K Y+ K +
Sbjct: 330 IFSALPSEQQMKVFAPAPTGFRKVILATNIAETSITIPGIRYVIDPGFVKARSYDPSKGM 389
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S+ S PG + LY +EKL + PE++R L + LQ
Sbjct: 390 ESLDVVPASKAQTLQRSGRAGREGPGKSFRLYPEREFEKLEDSTK-PEIKRCNLSNIILQ 448
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEEL-TPLGHHLAKLPVDVL 406
+K L + I F ++ P AI A++ L+ +GA+ D +L P+G+ +++LP++ +
Sbjct: 449 LKALGIDDIVGF--DFIDKPSRGAIIKALAELHSLGALADDGKLENPVGYQMSRLPLEPV 506
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
K ++ F CL +L A LS +S F P+++++ +K ++
Sbjct: 507 YSKALILANQFNCLEEMLITVAVLSVESIFYDPREKREEARTSK-------------NHF 553
Query: 467 SSTQSDHLVLMVAYKKWQKILLKR---GT-----KAAQQFCSKYFLSSSVMYMIRDMRIQ 518
+S + DHL + Y++ + L KR G+ K +++C + +++S + RD+ Q
Sbjct: 554 ASVEGDHLTYLSVYRESDEFLEKRKAAGSGNNIDKIMKKWCKENYVNSRSLKHARDIYRQ 613
Query: 519 FGTLLADIG 527
+ IG
Sbjct: 614 IREHVEQIG 622
Score = 89 (36.4 bits), Expect = 3.1e-37, Sum P(4) = 3.1e-37
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 52 LKVILMSATVDSNLFSRYFGDCPVITAEGRTHPV 85
LK+I+MSA++D+ +FS YFG + +GR PV
Sbjct: 229 LKLIIMSASLDARVFSEYFGGAKAVHVQGRQFPV 262
Score = 68 (29.0 bits), Expect = 3.1e-37, Sum P(4) = 3.1e-37
Identities = 15/37 (40%), Positives = 24/37 (64%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQS 45
D +L+ + +IVDE H+RS+ D LL +LK + +S
Sbjct: 150 DPHLSRYSVIIVDEAHDRSVHTDVLLALLKKIQRTRS 186
Score = 63 (27.2 bits), Expect = 3.1e-37, Sum P(4) = 3.1e-37
Identities = 13/39 (33%), Positives = 26/39 (66%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
VHIHP+S+ + K ++F E ++T+K ++++ TI+
Sbjct: 665 VHIHPTSVLFRAKP---ECVIFNELMQTSKKYIKNLTII 700
>UNIPROTKB|G4MKC3 [details] [associations]
symbol:MGG_02518 "ATP-dependent RNA helicase DHX8"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 EMBL:CM001231 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
KO:K13117 RefSeq:XP_003709326.1 EnsemblFungi:MGG_02518T0
GeneID:2681615 KEGG:mgr:MGG_02518 Uniprot:G4MKC3
Length = 671
Score = 349 (127.9 bits), Expect = 4.2e-37, Sum P(3) = 4.2e-37
Identities = 97/277 (35%), Positives = 138/277 (49%)
Query: 182 VCHVDETCGEGAILVFLPGVAEIHILLDRLAA-SYRFGGPSSDWL-LALHSSVASVDQKK 239
V V E +G ILVFL G EI +D ++ + L L L S +++ Q
Sbjct: 237 VLDVHENEPDGDILVFLTGRDEIEAAVDAVSERTAHLTSQDRGLLPLPLFSGLSTEQQMY 296
Query: 240 VFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXX 299
+F P RKVI +TNIAE S+TI +VYV D G K YN + + ++ IS
Sbjct: 297 IFEEAPANTRKVIFSTNIAEASVTISGIVYVVDSGFVKLRAYNPKTGIETLTAVPISKAA 356
Query: 300 XXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIF 359
KPG C+ LYT Y L +PE+QR L LQ+K L + + F
Sbjct: 357 AAQRAGRAGRTKPGKCFRLYTEESYTSLSDT-NIPEVQRSNLAPFILQLKALGIDNVLHF 415
Query: 360 LSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKLPVDVLIGKMMLFGGIFG 418
L PP E +T A+ +LY +GA++ +LT PLG +A+L VD ++ K +L FG
Sbjct: 416 --DFLTPPPAELMTKALELLYSLGALDDYAKLTKPLGLRMAELAVDPMMAKTLLSAESFG 473
Query: 419 CLSPILSISAFLSYKSP-FIYPKDEKQNVE--RAKLA 452
CLS +L+I+A S +I + E++ E R K A
Sbjct: 474 CLSEMLTIAAMTSAGGDVWIQHEGERKQFESRRRKFA 510
Score = 106 (42.4 bits), Expect = 4.2e-37, Sum P(3) = 4.2e-37
Identities = 33/103 (32%), Positives = 54/103 (52%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L+ + V+VDE HERS+ D LL +LK + +K+ P+L++I+ SAT+ + F
Sbjct: 130 DPLLSRYSIVMVDEAHERSVSTDILLGLLKKIRKKR-----PELRIIISSATLQAEQFLA 184
Query: 69 YFGDC----------P------VITAEGRTHPVTTYFLEDVYE 95
+F P +++ EGRT+P+ +LE E
Sbjct: 185 FFSSTLGGSRQDREEPQGTIGTIVSLEGRTYPIDILYLESPAE 227
Score = 59 (25.8 bits), Expect = 4.2e-37, Sum P(3) = 4.2e-37
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 610 GRREVHIHPSSINSQLKSFEHPFLVFLEKVETN-KVFLRDTTIV 652
G +H HPSS+ K+ +++F E +ET K F+RD + V
Sbjct: 615 GGTTLHAHPSSLMFNRKA---DWVIFHEVMETGAKTFIRDISKV 655
>GENEDB_PFALCIPARUM|PF08_0042 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase
prh1, putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 273 (101.2 bits), Expect = 5.1e-37, Sum P(3) = 5.1e-37
Identities = 65/213 (30%), Positives = 111/213 (52%)
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
+L L+SS+ + QK +F P RKVI++TNIAETS+TI ++ YV D G+ K ++
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+ + + IS PG Y +YT+ YE M P+ +PE+ R L ++
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQI 520
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
L++K +++ F E P++E + +L+++ AI+ + LT LG L P++
Sbjct: 521 YLELKAMNINNPLEF--NFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLN 578
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFI 437
+ ++L F C+ I +I A L+ S F+
Sbjct: 579 PIYANILLCSIEFNCIDEIATIVALLNCDSIFL 611
Score = 182 (69.1 bits), Expect = 5.1e-37, Sum P(3) = 5.1e-37
Identities = 65/212 (30%), Positives = 103/212 (48%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ D L +I+DE+HERS+ D LL K LL+K+ K+K+ILMSAT D N+
Sbjct: 130 IMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRK-----KIKIILMSATFDINI 184
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAA-IRYEASSKSGPVNN-- 122
F+++F + P+IT + H +T Y+ E +Y L++ S I + +S S N
Sbjct: 185 FNQFFNNPPIITIPHKLHKITIYYPRRNIE--DYILSVVSTILQIHFGNTSYSSEFENDD 242
Query: 123 --RRGKKNLV--LSGWGDDSLLSEEY-INXXXXXXXXXXXXEQTR-QNLKRLNEDVIDYD 176
R K N + L+ + + L+E +N + L D I +
Sbjct: 243 DHRENKPNELNELNKSNEQNELNESNEVNKEHDSYESNKTHDINEIDEQNNLQTDNISMN 302
Query: 177 LL-EDLVCHVDETCGEGAILVFLPGVAEIHIL 207
+ ED+ D++ G+ ILVFLPG EI ++
Sbjct: 303 NINEDIKKTEDKSLGD--ILVFLPGQEEIEMV 332
Score = 74 (31.1 bits), Expect = 5.1e-37, Sum P(3) = 5.1e-37
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINL 531
DHL L+ + WQ+ +K + FC+ Y L++ ++ + ++IQ ++ + I +
Sbjct: 714 DHLTLLHIFYLWQEADIKE----KKHFCNIYALNNEILQQVEKIKIQLLEIMKNKMKIEI 769
Query: 532 PNK 534
P K
Sbjct: 770 PKK 772
>UNIPROTKB|Q8IB47 [details] [associations]
symbol:PF08_0042 "ATP-dependent RNA helicase prh1,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261 KO:K01509
EMBL:AL844507 RefSeq:XP_001349312.1 ProteinModelPortal:Q8IB47
EnsemblProtists:PF08_0042:mRNA GeneID:2655493 KEGG:pfa:PF08_0042
EuPathDB:PlasmoDB:PF3D7_0821300 ProtClustDB:CLSZ2515096
Uniprot:Q8IB47
Length = 867
Score = 273 (101.2 bits), Expect = 5.1e-37, Sum P(3) = 5.1e-37
Identities = 65/213 (30%), Positives = 111/213 (52%)
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
+L L+SS+ + QK +F P RKVI++TNIAETS+TI ++ YV D G+ K ++
Sbjct: 402 ILQLYSSLPNKKQKVIFEPVPPNTRKVILSTNIAETSVTIPNIKYVIDSGKVKIKYFDVN 461
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+ + + IS PG Y +YT+ YE M P+ +PE+ R L ++
Sbjct: 462 RGSNVLRVTQISKDSAIQRSGRAGREAPGQVYRIYTKEEYEN-MNPFLIPEIFRSDLTQI 520
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVD 404
L++K +++ F E P++E + +L+++ AI+ + LT LG L P++
Sbjct: 521 YLELKAMNINNPLEF--NFPENPRKELFVHSAKMLFKINAIDMNNNLTDLGKKLCLFPLN 578
Query: 405 VLIGKMMLFGGIFGCLSPILSISAFLSYKSPFI 437
+ ++L F C+ I +I A L+ S F+
Sbjct: 579 PIYANILLCSIEFNCIDEIATIVALLNCDSIFL 611
Score = 182 (69.1 bits), Expect = 5.1e-37, Sum P(3) = 5.1e-37
Identities = 65/212 (30%), Positives = 103/212 (48%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ D L +I+DE+HERS+ D LL K LL+K+ K+K+ILMSAT D N+
Sbjct: 130 IMNDPLLKKYKFLILDEIHERSIRTDVLLGYTKILLQKRK-----KIKIILMSATFDINI 184
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAA-IRYEASSKSGPVNN-- 122
F+++F + P+IT + H +T Y+ E +Y L++ S I + +S S N
Sbjct: 185 FNQFFNNPPIITIPHKLHKITIYYPRRNIE--DYILSVVSTILQIHFGNTSYSSEFENDD 242
Query: 123 --RRGKKNLV--LSGWGDDSLLSEEY-INXXXXXXXXXXXXEQTR-QNLKRLNEDVIDYD 176
R K N + L+ + + L+E +N + L D I +
Sbjct: 243 DHRENKPNELNELNKSNEQNELNESNEVNKEHDSYESNKTHDINEIDEQNNLQTDNISMN 302
Query: 177 LL-EDLVCHVDETCGEGAILVFLPGVAEIHIL 207
+ ED+ D++ G+ ILVFLPG EI ++
Sbjct: 303 NINEDIKKTEDKSLGD--ILVFLPGQEEIEMV 332
Score = 74 (31.1 bits), Expect = 5.1e-37, Sum P(3) = 5.1e-37
Identities = 16/63 (25%), Positives = 33/63 (52%)
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINL 531
DHL L+ + WQ+ +K + FC+ Y L++ ++ + ++IQ ++ + I +
Sbjct: 714 DHLTLLHIFYLWQEADIKE----KKHFCNIYALNNEILQQVEKIKIQLLEIMKNKMKIEI 769
Query: 532 PNK 534
P K
Sbjct: 770 PKK 772
>GENEDB_PFALCIPARUM|MAL13P1.322 [details] [associations]
symbol:MAL13P1.322 "splicing factor,
putative" species:5833 "Plasmodium falciparum" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 293 (108.2 bits), Expect = 7.9e-37, Sum P(4) = 7.9e-37
Identities = 78/263 (29%), Positives = 133/263 (50%)
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
++ ++S ++S Q K+F + +RK+I++TNIAETS+T+D + YV D G K YN
Sbjct: 773 YIFPIYSQLSSEQQSKIFKK--YDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQ 830
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQ--VPEMQRMPL 341
+ + IS GICY LYT + + L YQ +PE+QR L
Sbjct: 831 TIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTF--LCDLYQNNIPEIQRSNL 888
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
+ L +K L + + F ++ P +E+I ++ L+ +GAI + LT +G + +
Sbjct: 889 SNVVLLLKSLHVQNL--FEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQF 946
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGL 461
P+D + K++++ F C IL I + LS S F+ K+ +++E K +K
Sbjct: 947 PLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKK-----EKF--- 998
Query: 462 SDSNDSSTQSDHLVLMVAYKKWQ 484
+ +SDHL L+ Y +W+
Sbjct: 999 -----TVPESDHLTLLNIYLQWR 1016
Score = 155 (59.6 bits), Expect = 7.9e-37, Sum P(4) = 7.9e-37
Identities = 51/168 (30%), Positives = 80/168 (47%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
DK L + +I+DE HERS+ D LL +LK++ K++ LK+I+ SAT+D+ FS
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRN-----DLKLIVTSATIDAKKFSA 641
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
+FG+ P+ +GRT V +L N + AI+ S + +N G
Sbjct: 642 FFGNAPIYNIQGRTFKVHIEYLRT---PCNDYIECAVQKAIQIHVSDNN--YDNNFGDIL 696
Query: 129 LVLSGWGDDS----LLSEEYINXXXXXXXXXXXXEQTRQNLKR-LNED 171
+ ++G D + LLSE + + T +K LNED
Sbjct: 697 IFMTGQEDINATCYLLSERFYEVYESYKESKNNKKDTINKIKNILNED 744
Score = 65 (27.9 bits), Expect = 7.9e-37, Sum P(4) = 7.9e-37
Identities = 21/107 (19%), Positives = 47/107 (43%)
Query: 459 EGLSDSNDSST--QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMR 516
E + + T +SDHL L+ Y +W R + +C+K F+ + +++
Sbjct: 989 ESIESKKEKFTVPESDHLTLLNIYLQW------RSHNYSYSWCTKNFIQYKALNKAKEVY 1042
Query: 517 IQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQM--FNMYAN 561
Q ++ + + N+ N+ +K +F + +++ F+ Y N
Sbjct: 1043 SQLIDIIKTLNIKNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYIN 1089
Score = 61 (26.5 bits), Expect = 7.9e-37, Sum P(4) = 7.9e-37
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 615 HIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
H+HP+S + + ++++ E V T K ++R+ T V P
Sbjct: 1097 HVHPNSSLYNI-GYTPDYVIYQEIVFTTKEYMRNVTTVDP 1135
Score = 40 (19.1 bits), Expect = 3.0e-34, Sum P(4) = 3.0e-34
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 561 NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHP 605
N +++ +C+G + N A + + + NLR +N + HP
Sbjct: 1061 NKWELIRKTICSGYFHNAAKLK---SFSEYINLR--TNVSCHVHP 1100
Score = 39 (18.8 bits), Expect = 6.2e-25, Sum P(4) = 6.2e-25
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 38 KDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVY 94
++LL+ + + K K L+ A ++N+ G+ T G+T + Y E+ Y
Sbjct: 470 EELLKLKESLPIYKSKHELLDAVYNNNIII-IVGE----TGSGKTTQIVQYLYEEGY 521
>UNIPROTKB|C0H5K5 [details] [associations]
symbol:MAL13P1.322 "Splicing factor, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0000398 "mRNA
splicing, via spliceosome" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0000398 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
EMBL:AL844509 HOGENOM:HOG000175261 KO:K12815 RefSeq:XP_002809102.1
ProteinModelPortal:C0H5K5 EnsemblProtists:MAL13P1.322:mRNA
GeneID:813888 KEGG:pfa:MAL13P1.322 EuPathDB:PlasmoDB:PF3D7_1364300
OMA:YFHNAAK ProtClustDB:CLSZ2500787 Uniprot:C0H5K5
Length = 1151
Score = 293 (108.2 bits), Expect = 7.9e-37, Sum P(4) = 7.9e-37
Identities = 78/263 (29%), Positives = 133/263 (50%)
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
++ ++S ++S Q K+F + +RK+I++TNIAETS+T+D + YV D G K YN
Sbjct: 773 YIFPIYSQLSSEQQSKIFKK--YDLRKIIVSTNIAETSLTLDGIKYVIDTGYCKLKVYNQ 830
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQ--VPEMQRMPL 341
+ + IS GICY LYT + + L YQ +PE+QR L
Sbjct: 831 TIGMDVLQVTPISQANANQRSGRAGRTGAGICYRLYTENTF--LCDLYQNNIPEIQRSNL 888
Query: 342 VELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKL 401
+ L +K L + + F ++ P +E+I ++ L+ +GAI + LT +G + +
Sbjct: 889 SNVVLLLKSLHVQNL--FEFDFIDVPSKESIINSLHELWVLGAINNEGNLTDIGRKMVQF 946
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGL 461
P+D + K++++ F C IL I + LS S F+ K+ +++E K +K
Sbjct: 947 PLDPPLSKIVIYSQNFQCTKEILIIVSMLSSPSIFLESKENNESIESKK-----EKF--- 998
Query: 462 SDSNDSSTQSDHLVLMVAYKKWQ 484
+ +SDHL L+ Y +W+
Sbjct: 999 -----TVPESDHLTLLNIYLQWR 1016
Score = 155 (59.6 bits), Expect = 7.9e-37, Sum P(4) = 7.9e-37
Identities = 51/168 (30%), Positives = 80/168 (47%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
DK L + +I+DE HERS+ D LL +LK++ K++ LK+I+ SAT+D+ FS
Sbjct: 587 DKELDKYSVIIMDEAHERSINTDVLLGILKNICLKRN-----DLKLIVTSATIDAKKFSA 641
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
+FG+ P+ +GRT V +L N + AI+ S + +N G
Sbjct: 642 FFGNAPIYNIQGRTFKVHIEYLRT---PCNDYIECAVQKAIQIHVSDNN--YDNNFGDIL 696
Query: 129 LVLSGWGDDS----LLSEEYINXXXXXXXXXXXXEQTRQNLKR-LNED 171
+ ++G D + LLSE + + T +K LNED
Sbjct: 697 IFMTGQEDINATCYLLSERFYEVYESYKESKNNKKDTINKIKNILNED 744
Score = 65 (27.9 bits), Expect = 7.9e-37, Sum P(4) = 7.9e-37
Identities = 21/107 (19%), Positives = 47/107 (43%)
Query: 459 EGLSDSNDSST--QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMR 516
E + + T +SDHL L+ Y +W R + +C+K F+ + +++
Sbjct: 989 ESIESKKEKFTVPESDHLTLLNIYLQW------RSHNYSYSWCTKNFIQYKALNKAKEVY 1042
Query: 517 IQFGTLLADIGLINLPNKNQTGGKKKDDLDSWFSDESQM--FNMYAN 561
Q ++ + + N+ N+ +K +F + +++ F+ Y N
Sbjct: 1043 SQLIDIIKTLNIKNVSCDNKWELIRKTICSGYFHNAAKLKSFSEYIN 1089
Score = 61 (26.5 bits), Expect = 7.9e-37, Sum P(4) = 7.9e-37
Identities = 12/40 (30%), Positives = 23/40 (57%)
Query: 615 HIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
H+HP+S + + ++++ E V T K ++R+ T V P
Sbjct: 1097 HVHPNSSLYNI-GYTPDYVIYQEIVFTTKEYMRNVTTVDP 1135
Score = 40 (19.1 bits), Expect = 3.0e-34, Sum P(4) = 3.0e-34
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 561 NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHP 605
N +++ +C+G + N A + + + NLR +N + HP
Sbjct: 1061 NKWELIRKTICSGYFHNAAKLK---SFSEYINLR--TNVSCHVHP 1100
Score = 39 (18.8 bits), Expect = 6.2e-25, Sum P(4) = 6.2e-25
Identities = 14/57 (24%), Positives = 27/57 (47%)
Query: 38 KDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVITAEGRTHPVTTYFLEDVY 94
++LL+ + + K K L+ A ++N+ G+ T G+T + Y E+ Y
Sbjct: 470 EELLKLKESLPIYKSKHELLDAVYNNNIII-IVGE----TGSGKTTQIVQYLYEEGY 521
>UNIPROTKB|F1S9V4 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:CU693433 Ensembl:ENSSSCT00000002836
ArrayExpress:F1S9V4 Uniprot:F1S9V4
Length = 1333
Score = 353 (129.3 bits), Expect = 8.6e-37, Sum P(2) = 8.6e-37
Identities = 105/303 (34%), Positives = 151/303 (49%)
Query: 193 AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVI 252
++LVFLPG+ EI+ + + L + LHSSV +Q VFL P RKVI
Sbjct: 394 SVLVFLPGLGEINCMHELLTNMVH----KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKVI 449
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXX-XXXXXXXXXXVK 311
++TNIAE+S+T+ DV YV D + + S+ W S V
Sbjct: 450 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKEGRAGRVS 509
Query: 312 PGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEA 371
G CY L + ++ + + +PEM R PL L++KLL +G + L+ AL PP
Sbjct: 510 KGYCYRLVPKDFWDTSIPDHVIPEMLRCPLGSTILKLKLLDMGEPRALLATALSPPSLGD 569
Query: 372 ITTAISVLYEVGA--IEG---DE-----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLS 421
I I +L EVGA + G DE ELT LG LA LPV+ +GK+++ G +FGCL
Sbjct: 570 IERTILLLKEVGALAVRGPRDDENPHDGELTFLGRVLAHLPVNQQLGKLIVLGHVFGCLD 629
Query: 422 PILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYK 481
L I+A LS K+ F P + + R+K+ G S++SD + L+ A+K
Sbjct: 630 ECLIIAASLSLKNFFAMPFRQHLDGYRSKM-----NFSG-------SSKSDCIALVEAFK 677
Query: 482 KWQ 484
WQ
Sbjct: 678 AWQ 680
Score = 130 (50.8 bits), Expect = 8.6e-37, Sum P(2) = 8.6e-37
Identities = 33/82 (40%), Positives = 47/82 (57%)
Query: 10 KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 69
K+L TH+ +DEVHER+ DFLL+V++ LL S +KV+LMSAT+ F+ Y
Sbjct: 250 KSLMEFTHIFIDEVHERTEEMDFLLLVVRKLLRTNSRF----VKVVLMSATISCKEFADY 305
Query: 70 FGDCPVITAEGRTHPVTTYFLE 91
F PV + +P Y +E
Sbjct: 306 FA-VPV---QNELNPACVYEVE 323
>UNIPROTKB|F1S3A8 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104877 EMBL:CU914723
Ensembl:ENSSSCT00000003045 OMA:IATIPEI Uniprot:F1S3A8
Length = 766
Score = 339 (124.4 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 97/333 (29%), Positives = 169/333 (50%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF--GGPSSD 223
K ED ++ + + L H+ G+ IL+F+PG +I + D++ P+
Sbjct: 256 KTPQEDYVEAAVKQSLQVHLSGAPGD--ILIFMPGQEDIEVTSDQIVEHLEELENAPALA 313
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L ++S + S Q K+F + P+ +RK I+ATNIAETS+T+D +++V D G K +N
Sbjct: 314 -VLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNP 372
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + ++ IS PG C+ LYT+ Y+ + VPE+QR L
Sbjct: 373 RIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLAN 432
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
+ L +K SLG + ++PP E+ + ++ L+ +GA++ LT G + + P+
Sbjct: 433 VVLLLK--SLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPL 490
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPK--DEKQNVERAKLALL-TDKLEG 460
D + KM++ GC S IL I + LS + F PK +E+ + R K A+ +D L
Sbjct: 491 DPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTY 550
Query: 461 LS-----DSNDSSTQ--SDHLVLMVAYKKWQKI 486
L+ +N+ ST +DH + A +K +++
Sbjct: 551 LNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREV 583
Score = 134 (52.2 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +I+DE HERSL D L +L++++ ++S LK+I+ SAT+D+ F+
Sbjct: 179 EADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS-----DLKLIVTSATMDAEKFAS 233
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+FG+ P+ GRT PV F
Sbjct: 234 FFGNVPIFHIPGRTFPVDILF 254
Score = 60 (26.2 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+SDHL + Y +W + + +C+ +F+ + M +R++R Q ++
Sbjct: 544 ESDHLTYLNVYLQW------KNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIM 591
Score = 39 (18.8 bits), Expect = 1.3e-26, Sum P(2) = 1.3e-26
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 77 TAEGRTHPVTTYFLEDVY 94
T G+T +T Y ED Y
Sbjct: 96 TGSGKTTQLTQYLHEDGY 113
>UNIPROTKB|P43329 [details] [associations]
symbol:hrpA species:83333 "Escherichia coli K-12"
[GO:0004386 "helicase activity" evidence=IEA;IMP] [GO:0009451 "RNA
modification" evidence=IMP] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0006397 "mRNA processing"
evidence=IMP] InterPro:IPR001650 InterPro:IPR003593
InterPro:IPR007502 InterPro:IPR010222 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
GO:GO:0005524 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:D42105
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
GO:GO:0009451 PIR:H64892 RefSeq:NP_415931.4 RefSeq:YP_489680.1
ProteinModelPortal:P43329 SMR:P43329 DIP:DIP-9937N IntAct:P43329
MINT:MINT-1229564 PRIDE:P43329 EnsemblBacteria:EBESCT00000000014
EnsemblBacteria:EBESCT00000015011 GeneID:12932513 GeneID:948444
KEGG:ecj:Y75_p1389 KEGG:eco:b1413 PATRIC:32118112 EchoBASE:EB2772
EcoGene:EG12936 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
ProtClustDB:PRK11131 BioCyc:EcoCyc:G6732-MONOMER
BioCyc:ECOL316407:JW5905-MONOMER Genevestigator:P43329
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967 Uniprot:P43329
Length = 1300
Score = 306 (112.8 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 90/282 (31%), Positives = 145/282 (51%)
Query: 171 DVIDYDLLEDLVCHVDETCGE--GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLAL 228
D + D L+ + VDE E G IL+F+ G EI D L + ++ +L L
Sbjct: 268 DDTERDQLQAIFDAVDELSQESHGDILIFMSGEREIRDTADALN---KLNLRHTE-ILPL 323
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
++ +++ +Q +VF R++++ATN+AETS+T+ + YV D G + +RY+ + K+
Sbjct: 324 YARLSNSEQNRVF--QSHSGRRIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQ 381
Query: 289 SMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRP-YQVPEMQRMPLVELCLQ 347
+ + IS V GIC LY+ + L RP + PE+ R L + LQ
Sbjct: 382 RLPIEPISQASANQRKGRCGRVSEGICIRLYSEDDF--LSRPEFTDPEILRTNLASVILQ 439
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE-----LTPLGHHLAKLP 402
+ L LG I F +E P + I + +L E+GAI DE+ LTPLG L++LP
Sbjct: 440 MTALGLGDIAAF--PFVEAPDKRNIQDGVRLLEELGAITTDEQASAYKLTPLGRQLSQLP 497
Query: 403 VDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQ 444
VD + +M+L GC+ + I++ LS + P P D++Q
Sbjct: 498 VDPRLARMVLEAQKHGCVREAMIITSALSIQDPRERPMDKQQ 539
Score = 176 (67.0 bits), Expect = 1.9e-36, Sum P(2) = 1.9e-36
Identities = 40/91 (43%), Positives = 56/91 (61%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q D+ L +I+DE HERSL DFLL LK+LL ++ P LK+I+ SAT+D
Sbjct: 182 IQQDRLLMQYDTIIIDEAHERSLNIDFLLGYLKELLPRR-----PDLKIIITSATIDPER 236
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYES 96
FSR+F + P+I GRT+PV + V E+
Sbjct: 237 FSRHFNNAPIIEVSGRTYPVEVRYRPIVEEA 267
Score = 37 (18.1 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 5/13 (38%), Positives = 8/13 (61%)
Query: 310 VKPGICYSLYTRH 322
+ P +C L+ RH
Sbjct: 740 IDPALCRELFIRH 752
>UNIPROTKB|F1MNA1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071547 "piP-body" evidence=IEA] [GO:0043046 "DNA
methylation involved in gamete generation" evidence=IEA]
[GO:0034587 "piRNA metabolic process" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0007140 "male meiosis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
InterPro:IPR002999 GO:GO:0005524 GO:GO:0005634 GO:GO:0009566
GO:GO:0007283 GO:GO:0003676 GO:GO:0007140 Pfam:PF00567
SMART:SM00333 PROSITE:PS50304 GO:GO:0043046 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0034587
GeneTree:ENSGT00700000104393 GO:GO:0008026 GO:GO:0071547
OMA:INDWFTI EMBL:DAAA02053320 EMBL:DAAA02053321 EMBL:DAAA02053322
EMBL:DAAA02053323 IPI:IPI00699308 Ensembl:ENSBTAT00000027199
Uniprot:F1MNA1
Length = 1392
Score = 344 (126.2 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 102/305 (33%), Positives = 150/305 (49%)
Query: 193 AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVI 252
++LVFLPG+ EI+ + + L + LHSSV +Q VFL P RK+I
Sbjct: 393 SVLVFLPGLGEINYMHELLTNMVH----KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKII 448
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKP 312
++TNIAE+S+T+ DV YV D + + S+ W S V
Sbjct: 449 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCEQRKGRAGRVSK 508
Query: 313 GICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAI 372
G CY L + ++ + + +PEM R PL L++KLL +G + L+ AL PP I
Sbjct: 509 GYCYRLVHKDFWDNSIPNHVIPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPSLSDI 568
Query: 373 TTAISVLYEVGA--IEG--------DEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
I +L EVGA + G D ELT LG LA+LPV +GK+++ G +FGCL
Sbjct: 569 ERTILLLKEVGALAVSGRREDDNPHDGELTFLGRVLAQLPVSQQLGKLIVLGHVFGCLDE 628
Query: 423 ---ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVA 479
I+ I+A LS K+ F P + + R K+ G S++SD + L+ A
Sbjct: 629 CLIIVLIAASLSLKNFFAMPFRQHLDGYRNKV-----NFAG-------SSRSDCIALVEA 676
Query: 480 YKKWQ 484
++ WQ
Sbjct: 677 FRAWQ 681
Score = 136 (52.9 bits), Expect = 2.3e-36, Sum P(2) = 2.3e-36
Identities = 37/101 (36%), Positives = 55/101 (54%)
Query: 10 KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 69
K+L THV +DEVHER+ DFLL+V++ LL S +KV+LMSAT++ F+ Y
Sbjct: 249 KSLVEFTHVFIDEVHERTEEMDFLLLVVRKLLRTNSRF----VKVVLMSATINCREFADY 304
Query: 70 FGD------CP--VITAEGRTHPVTTYFLEDVYESINYRLA 102
F P + EG+ + Y+L D+ + RL+
Sbjct: 305 FAVPVQNKMSPAYIFEVEGKPFSIEEYYLNDLEHVHHSRLS 345
>UNIPROTKB|E2RPC8 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 EMBL:AAEX03006584 EMBL:AAEX03006585
Ensembl:ENSCAFT00000027962 Uniprot:E2RPC8
Length = 781
Score = 295 (108.9 bits), Expect = 5.2e-36, Sum P(3) = 5.2e-36
Identities = 89/290 (30%), Positives = 142/290 (48%)
Query: 184 HVDETCGEGAILVFLPGVAEIHI---LLDRLAAS----YRFGGPSSDWLLAL--HSSVAS 234
H++E G+ ILVFL G EI LL ++A S Y + D LL L + S+ +
Sbjct: 267 HLNEMAGD--ILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTT 324
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
Q+++FL PP IRK +I+TNI+ TS+TID + YV D G K+ +N + L +
Sbjct: 325 DQQRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVP 384
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G C+ +Y++ + + M + +PE++R L + L +K L++
Sbjct: 385 ISKSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIH 444
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFG 414
+ F L+PP E I A+ LY+ AI+ +T LG + + P+ + ++
Sbjct: 445 DVIRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKA 502
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D E Q + L K G +D
Sbjct: 503 ASLDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFND 552
Score = 176 (67.0 bits), Expect = 5.2e-36, Sum P(3) = 5.2e-36
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++ GD NLT + +I+DE HER+L D L +LK L +++S + LKV++MSAT++
Sbjct: 157 HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELA 216
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
S +FG+CP+ GR +PV F
Sbjct: 217 KLSAFFGNCPIFDIPGRLYPVREKF 241
Score = 44 (20.5 bits), Expect = 5.2e-36, Sum P(3) = 5.2e-36
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
+++ LCAG + NVA G
Sbjct: 618 VLRRCLCAGYFKNVARRSVG 637
>UNIPROTKB|Q17R09 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0008380 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000175261 HOVERGEN:HBG039428 KO:K12815
EMBL:BC118085 IPI:IPI00690755 RefSeq:NP_001069266.1
UniGene:Bt.42896 ProteinModelPortal:Q17R09 STRING:Q17R09
PRIDE:Q17R09 GeneID:520046 KEGG:bta:520046 CTD:9785
NextBio:20873012 Uniprot:Q17R09
Length = 1227
Score = 340 (124.7 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 97/333 (29%), Positives = 169/333 (50%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF--GGPSSD 223
K ED ++ + + L H+ G+ IL+F+PG +I + D++ P+
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGAPGD--ILIFMPGQEDIEVTSDQIVEHLEELENAPALA 774
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L ++S + S Q K+F + P+ +RK I+ATNIAETS+T+D +++V D G K +N
Sbjct: 775 -VLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNP 833
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + ++ IS PG C+ LYT+ Y+ + VPE+QR L
Sbjct: 834 RIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLAN 893
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
+ L +K SLG + ++PP E+ + ++ L+ +GA++ LT G + + P+
Sbjct: 894 VVLLLK--SLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPL 951
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPK--DEKQNVERAKLALL-TDKLEG 460
D + KM++ GC S IL I + LS + F PK +E+ + R K A+ +D L
Sbjct: 952 DPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLSY 1011
Query: 461 LS-----DSNDSSTQ--SDHLVLMVAYKKWQKI 486
L+ +N+ ST +DH + A +K +++
Sbjct: 1012 LNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREV 1044
Score = 134 (52.2 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +I+DE HERSL D L +L++++ ++S LK+I+ SAT+D+ F+
Sbjct: 640 EADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS-----DLKLIVTSATMDAEKFAS 694
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+FG+ P+ GRT PV F
Sbjct: 695 FFGNVPIFHIPGRTFPVDILF 715
Score = 58 (25.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+SDHL + Y +W + + +C+ +F+ + M +R++R Q ++
Sbjct: 1005 ESDHLSYLNVYLQW------KNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIM 1052
Score = 39 (18.8 bits), Expect = 6.3e-26, Sum P(2) = 6.3e-26
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 77 TAEGRTHPVTTYFLEDVY 94
T G+T +T Y ED Y
Sbjct: 557 TGSGKTTQLTQYLHEDGY 574
>UNIPROTKB|E2RC56 [details] [associations]
symbol:DHX38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 KO:K12815 OMA:PSRSTWE CTD:9785
EMBL:AAEX03004090 RefSeq:XP_536800.2 ProteinModelPortal:E2RC56
Ensembl:ENSCAFT00000032225 GeneID:479669 KEGG:cfa:479669
NextBio:20854813 Uniprot:E2RC56
Length = 1226
Score = 339 (124.4 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 97/333 (29%), Positives = 169/333 (50%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF--GGPSSD 223
K ED ++ + + L H+ G+ IL+F+PG +I + D++ P+
Sbjct: 716 KTPQEDYVEAAVKQSLQVHLSGAPGD--ILIFMPGQEDIEVTSDQIVEHLEELENAPALA 773
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L ++S + S Q K+F + P+ +RK I+ATNIAETS+T+D +++V D G K +N
Sbjct: 774 -VLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNP 832
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + ++ IS PG C+ LYT+ Y+ + VPE+QR L
Sbjct: 833 RIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLAN 892
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
+ L +K SLG + ++PP E+ + ++ L+ +GA++ LT G + + P+
Sbjct: 893 VVLLLK--SLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPL 950
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPK--DEKQNVERAKLALL-TDKLEG 460
D + KM++ GC S IL I + LS + F PK +E+ + R K A+ +D L
Sbjct: 951 DPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTY 1010
Query: 461 LS-----DSNDSSTQ--SDHLVLMVAYKKWQKI 486
L+ +N+ ST +DH + A +K +++
Sbjct: 1011 LNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREV 1043
Score = 135 (52.6 bits), Expect = 7.1e-36, Sum P(2) = 7.1e-36
Identities = 31/81 (38%), Positives = 50/81 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + VI+DE HERSL D L +L++++ ++S LK+I+ SAT+D+ F+
Sbjct: 639 EADLDHYSAVIMDEAHERSLNTDVLFGLLREVVARRS-----DLKLIVTSATMDAEKFAA 693
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+FG+ P+ GRT PV F
Sbjct: 694 FFGNVPIFHIPGRTFPVDILF 714
Score = 60 (26.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+SDHL + Y +W + + +C+ +F+ + M +R++R Q ++
Sbjct: 1004 ESDHLTYLNVYLQW------KNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIM 1051
Score = 39 (18.8 bits), Expect = 8.1e-26, Sum P(2) = 8.1e-26
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 77 TAEGRTHPVTTYFLEDVY 94
T G+T +T Y ED Y
Sbjct: 556 TGSGKTTQLTQYLHEDGY 573
>RGD|1310345 [details] [associations]
symbol:Dhx38 "DEAH (Asp-Glu-Ala-His) box polypeptide 38"
species:10116 "Rattus norvegicus" [GO:0000398 "mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 RGD:1310345
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OrthoDB:EOG4Z62MS
IPI:IPI00371467 PRIDE:D4A321 Ensembl:ENSRNOT00000019810
UCSC:RGD:1310345 Uniprot:D4A321
Length = 1228
Score = 339 (124.4 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 97/333 (29%), Positives = 169/333 (50%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF--GGPSSD 223
K ED ++ + + L H+ G+ IL+F+PG +I + D++ P+
Sbjct: 718 KTPQEDYVEAAVKQSLQVHLSGAPGD--ILIFMPGQEDIEVTSDQIVEHLEELENAPALA 775
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L ++S + S Q K+F + P+ +RK I+ATNIAETS+T+D +++V D G K +N
Sbjct: 776 -VLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNP 834
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + ++ IS PG C+ LYT+ Y+ + VPE+QR L
Sbjct: 835 RIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLAN 894
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
+ L +K SLG + ++PP E+ + ++ L+ +GA++ LT G + + P+
Sbjct: 895 VVLLLK--SLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPL 952
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPK--DEKQNVERAKLALL-TDKLEG 460
D + KM++ GC S IL I + LS + F PK +E+ + R K A+ +D L
Sbjct: 953 DPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTY 1012
Query: 461 LS-----DSNDSSTQ--SDHLVLMVAYKKWQKI 486
L+ +N+ ST +DH + A +K +++
Sbjct: 1013 LNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREV 1045
Score = 135 (52.6 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
Identities = 30/81 (37%), Positives = 51/81 (62%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +I+DE HERSL D L +L++++ ++S LK+I+ SAT+D++ F+
Sbjct: 641 EADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS-----DLKLIVTSATMDADKFAA 695
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+FG+ P+ GRT PV F
Sbjct: 696 FFGNVPIFHIPGRTFPVDILF 716
Score = 60 (26.2 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+SDHL + Y +W + + +C+ +F+ + M +R++R Q ++
Sbjct: 1006 ESDHLTYLNVYLQW------KNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIM 1053
>DICTYBASE|DDB_G0269306 [details] [associations]
symbol:dhx35 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 dictyBase:DDB_G0269306 GO:GO:0005524
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 KO:K13117 OMA:NIFVVPP
RefSeq:XP_645858.1 ProteinModelPortal:Q55EC3
EnsemblProtists:DDB0233419 GeneID:8616802 KEGG:ddi:DDB_G0269306
InParanoid:Q55EC3 Uniprot:Q55EC3
Length = 716
Score = 332 (121.9 bits), Expect = 9.0e-36, Sum P(3) = 9.0e-36
Identities = 118/366 (32%), Positives = 168/366 (45%)
Query: 182 VCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF------------GGPSSDW-LLAL 228
+ + T G ILVFL G EI L+ L + P + LL +
Sbjct: 277 IIDIHTTQPPGDILVFLTGQEEIEKLIQTLDDKFEILRQYHQQHHHQQQQPFMKYSLLPM 336
Query: 229 HSSVASVDQKKVF--LRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKK 286
+S ++ Q KVF + +KIRK+II+TNIAETSITID VVYV DCG K Y+S+
Sbjct: 337 YSGLSINKQIKVFESVGDSKKIRKIIISTNIAETSITIDGVVYVVDCGFVKIKSYDSESG 396
Query: 287 LSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCL 346
L S+V S + G CY LYT YEKL+ +PE+QR L L
Sbjct: 397 LESLVIVPTSKSSANQRAGRAGRSRAGKCYRLYTELTYEKLLPDQTIPEIQRSNLTNTIL 456
Query: 347 QIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKLPVDV 405
Q+K L + I F +PP I + VLY +GA++ + +LT P G +A+ P D
Sbjct: 457 QLKALGIDNILNF-DFISQPPSSSLIR-GLEVLYGLGALDDNGKLTNPTGMIMAEFPTDP 514
Query: 406 LIGKMMLFGGI--FGCLSPILSISAFLSYKSPFIYP--KDEKQNV--ERAKLALLTDKLE 459
KM++ F C ++I+A L+ + F K K + E L LL +
Sbjct: 515 TFSKMIIQSSSNGFNCSDECITITAMLNIQGLFTNQNHKSRKHLLVKEGDHLTLLN--IF 572
Query: 460 GLSDSNDSSTQ--SDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRI 517
SN SS Q + H + YK Q++L R K + KY ++ + + R
Sbjct: 573 NSFISNQSSPQWCNQH---QINYKAMQRVLQVR--KQLLAYAKKYSINVISCFDSNNNRE 627
Query: 518 QFGTLL 523
Q L+
Sbjct: 628 QCSNLI 633
Score = 117 (46.2 bits), Expect = 9.0e-36, Sum P(3) = 9.0e-36
Identities = 32/97 (32%), Positives = 58/97 (59%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSA-----HDTPKLKVILMSATVDSNLFSRYFG- 71
+++DE HERSL D L+ +LK + +K+++ ++ LK+I+ SAT+++N F +F
Sbjct: 175 IMIDEAHERSLQTDLLMGLLKKVQKKRNSTNNNNNNDNSLKLIISSATLNANDFFNFFNY 234
Query: 72 ----D-----CPVITAEGRTHPVTTYFLEDVYESINY 99
D +++ EGRT+PV ++LE+ + NY
Sbjct: 235 NQTNDKSKDTSTILSIEGRTYPVDIHYLEE--STSNY 269
Score = 57 (25.1 bits), Expect = 9.0e-36, Sum P(3) = 9.0e-36
Identities = 18/60 (30%), Positives = 31/60 (51%)
Query: 599 SAAKAHPVW-YDGRREVH---IHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
+AA+ P Y RE H +HP+S+ S + +++F E T K +++D T + P
Sbjct: 644 NAAQLQPDGSYQTIREKHKLWLHPTSVLCLSNSPQ--WVIFNEVTITTKEYMKDVTSIEP 701
>UNIPROTKB|Q92620 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;IDA;TAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0071013 "catalytic step 2
spliceosome" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=TAS] [GO:0006406 "mRNA export from nucleus"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0031124 "mRNA 3'-end
processing" evidence=TAS] Reactome:REACT_71 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 EMBL:AC004682
GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675 GO:GO:0003676
GO:GO:0006406 GO:GO:0000398 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH471166 Reactome:REACT_1788
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 GO:GO:0006369 GO:GO:0031124 Reactome:REACT_78
HOVERGEN:HBG039428 KO:K12815 OMA:PSRSTWE CTD:9785 EMBL:AF038391
EMBL:D86977 EMBL:BC004235 EMBL:BC008340 IPI:IPI00294211
RefSeq:NP_054722.2 UniGene:Hs.151218 ProteinModelPortal:Q92620
SMR:Q92620 IntAct:Q92620 STRING:Q92620 PhosphoSite:Q92620
DMDM:85700389 PaxDb:Q92620 PeptideAtlas:Q92620 PRIDE:Q92620
DNASU:9785 Ensembl:ENST00000268482 GeneID:9785 KEGG:hsa:9785
UCSC:uc002fcb.3 GeneCards:GC16P072127 HGNC:HGNC:17211 HPA:HPA041347
MIM:605584 neXtProt:NX_Q92620 PharmGKB:PA27225 InParanoid:Q92620
OrthoDB:EOG4Z62MS PhylomeDB:Q92620 ChiTaRS:DHX38 GenomeRNAi:9785
NextBio:36846 ArrayExpress:Q92620 Bgee:Q92620 CleanEx:HS_DHX38
Genevestigator:Q92620 GermOnline:ENSG00000140829 Uniprot:Q92620
Length = 1227
Score = 339 (124.4 bits), Expect = 9.1e-36, Sum P(2) = 9.1e-36
Identities = 97/333 (29%), Positives = 169/333 (50%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF--GGPSSD 223
K ED ++ + + L H+ G+ IL+F+PG +I + D++ P+
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGAPGD--ILIFMPGQEDIEVTSDQIVEHLEELENAPALA 774
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L ++S + S Q K+F + P+ +RK I+ATNIAETS+T+D +++V D G K +N
Sbjct: 775 -VLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVFNP 833
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + ++ IS PG C+ LYT+ Y+ + VPE+QR L
Sbjct: 834 RIGMDALQIYPISQANANQRSGRAGRTGPGQCFRLYTQSAYKNELLTTTVPEIQRTNLAN 893
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
+ L +K SLG + ++PP E+ + ++ L+ +GA++ LT G + + P+
Sbjct: 894 VVLLLK--SLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPL 951
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPK--DEKQNVERAKLALL-TDKLEG 460
D + KM++ GC S IL I + LS + F PK +E+ + R K A+ +D L
Sbjct: 952 DPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLTY 1011
Query: 461 LS-----DSNDSSTQ--SDHLVLMVAYKKWQKI 486
L+ +N+ ST +DH + A +K +++
Sbjct: 1012 LNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREV 1044
Score = 134 (52.2 bits), Expect = 9.1e-36, Sum P(2) = 9.1e-36
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +I+DE HERSL D L +L++++ ++S LK+I+ SAT+D+ F+
Sbjct: 640 EADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS-----DLKLIVTSATMDAEKFAA 694
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+FG+ P+ GRT PV F
Sbjct: 695 FFGNVPIFHIPGRTFPVDILF 715
Score = 60 (26.2 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+SDHL + Y +W + + +C+ +F+ + M +R++R Q ++
Sbjct: 1005 ESDHLTYLNVYLQW------KNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIM 1052
Score = 39 (18.8 bits), Expect = 8.1e-26, Sum P(2) = 8.1e-26
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 77 TAEGRTHPVTTYFLEDVY 94
T G+T +T Y ED Y
Sbjct: 557 TGSGKTTQLTQYLHEDGY 574
>FB|FBgn0032194 [details] [associations]
symbol:CG4901 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000390 "spliceosomal complex disassembly" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0004386
"helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IMP] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
EMBL:AE014134 GO:GO:0022008 GO:GO:0006200 GO:GO:0003676
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:AY113491
RefSeq:NP_609356.2 UniGene:Dm.10854 SMR:Q9VL25 MINT:MINT-898830
STRING:Q9VL25 EnsemblMetazoa:FBtr0079947 GeneID:34357
KEGG:dme:Dmel_CG4901 UCSC:CG4901-RA FlyBase:FBgn0032194
InParanoid:Q9VL25 OrthoDB:EOG4MW6N5 GenomeRNAi:34357 NextBio:788096
Uniprot:Q9VL25
Length = 694
Score = 302 (111.4 bits), Expect = 2.7e-35, Sum P(3) = 2.7e-35
Identities = 108/391 (27%), Positives = 178/391 (45%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGA-ILVFLPGVAEIHILLDRLA--ASYRFGGPSS 222
K +ED I + +L L H+ T + +L+FL G EI L ++ A G +
Sbjct: 257 KEEHEDYI-HTVLVTLF-HIHRTTPKNHDVLIFLTGQEEIESLAQQIRQLAKIDTTGTTD 314
Query: 223 DWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
+ L++ ++ Q + F+ P +RKVI+ATNIAETSITI + V DCG KE +N
Sbjct: 315 LRVFTLYAQLSQGKQLECFVPTPANVRKVILATNIAETSITIPGIRCVIDCGFVKEKSFN 374
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ L + IS G CY YT+ + Q PE+ R
Sbjct: 375 TVDGLDVLKSVRISKAQAWQRAGRAGRDADGTCYRAYTKAEMDSFADATQ-PEILRTNPT 433
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIE-GDEE-LTPLGHHLAK 400
+ LQ+ L + F L+PP E+ + +A L +GAI+ GD+ +TPLG + +
Sbjct: 434 SMVLQLLALDID-CNNF--DFLDPPLEDGLRSAYKSLDALGAIKTGDDSYITPLGRQMVQ 490
Query: 401 LPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEG 460
P+D K++L FGC+ ILS+ + LS F+ N E+ ++A
Sbjct: 491 YPLDPKYSKLLLTASSFGCMEEILSLVSVLSSDHVFV------SNSEKNEMA-------A 537
Query: 461 LSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFG 520
L+ + S DHL L+ + + K ++ + +C +L+ + R++R Q
Sbjct: 538 LAHAKFQSKHGDHLTLLNVFNGFLK------SEKPKMWCHDNYLNLRSLTYARNVRRQLR 591
Query: 521 TLLADIGLINLPNKNQTGGKKKDDLDSWFSD 551
+ + L L + + KK L+ +F +
Sbjct: 592 EISEHLHLA-LNSSDDIEMLKKCILNGFFEN 621
Score = 139 (54.0 bits), Expect = 2.7e-35, Sum P(3) = 2.7e-35
Identities = 30/87 (34%), Positives = 51/87 (58%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D+ L + +I+DE HER++ D L ++KD +++ LKV++ SAT+D + F
Sbjct: 176 DRLLLKYSVIILDEAHERTVNADLLFGIVKDAQKERRKQKLANLKVVVTSATMDIDHFGN 235
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYE 95
YF +C + EGRT+PV ++ +E
Sbjct: 236 YF-NCKGMYLEGRTYPVRVMHTKEEHE 261
Score = 63 (27.2 bits), Expect = 2.7e-35, Sum P(3) = 2.7e-35
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 616 IHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVS 653
IHPSS+ ++ +++F E V+T + FLR T +S
Sbjct: 642 IHPSSVLHG--KYKPSYILFTEIVQTEQTFLRQVTEIS 677
>CGD|CAL0004556 [details] [associations]
symbol:orf19.2090 species:5476 "Candida albicans" [GO:0030686
"90S preribosome" evidence=IEA] [GO:0032040 "small-subunit
processome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 CGD:CAL0004556 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 EMBL:AACQ01000031
EMBL:AACQ01000030 KO:K14780 RefSeq:XP_719536.1 RefSeq:XP_719660.1
STRING:Q5ACX7 GeneID:3638741 GeneID:3638820 KEGG:cal:CaO19.2090
KEGG:cal:CaO19.9637 Uniprot:Q5ACX7
Length = 1263
Score = 349 (127.9 bits), Expect = 3.2e-35, Sum P(3) = 3.2e-35
Identities = 99/344 (28%), Positives = 166/344 (48%)
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
++L L+S + + Q KVF PP R I+ATN+AETS+TI + YV DCGR KE +YN
Sbjct: 772 YVLPLYSLLPTKQQMKVFEDPPPGSRICIVATNVAETSLTIPGIRYVVDCGRSKERKYNQ 831
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + S DW+S PG CY LY+ +E + VPE+ RMP
Sbjct: 832 ENGVQSFEVDWVSKASANQRAGRAGRTGPGHCYRLYSSAVFEDFFPQFSVPEILRMPFES 891
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLP 402
+ L +K + + +I F PP ++ A +L +GA++ ++ ++T LG ++ P
Sbjct: 892 IVLSMKSMGIDQIANFPFPT--PPDRFSLKKAEELLVILGALDKEQKQITDLGKKMSLFP 949
Query: 403 VDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNV-ERAKLALLTDKLEGL 461
+ K+++ G CLS I++I + LS PFI + N+ + A+ T
Sbjct: 950 LSPRFAKILIIGNQQECLSYIIAIVSALSVGDPFIGENELVGNMNDEARREFRTKFYHSR 1009
Query: 462 SDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQ-FCSKYFLSSSVMYMIRDMRIQFG 520
+ + S+ ++L+ A + + K Q F K++L +M I+ +R Q G
Sbjct: 1010 ALFSKLDASSNCMMLLSAVCAYDHV-----PKEEQNGFLQKHYLRHKMMEEIQKLRKQVG 1064
Query: 521 TLLADI-----GL-------INLPNKNQTGGKKKDDLDSWFSDE 552
++ ++ GL + +PNK Q K+ + S F D+
Sbjct: 1065 NIVENMIMSADGLQLEQKVKLPIPNKKQVSAMKQM-IASGFIDQ 1107
Score = 94 (38.1 bits), Expect = 3.2e-35, Sum P(3) = 3.2e-35
Identities = 26/82 (31%), Positives = 49/82 (59%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLE-KQSAH-DTPKL----KVILMSATVDSNLFSR--- 68
+I+DE HER++ D L+ +L +++ ++ H + P+L K+I+MSAT+ + FS
Sbjct: 570 IIIDEAHERNINTDILIGMLTRVVKLRRKYHKENPQLYKPLKLIIMSATLRVSDFSENPA 629
Query: 69 -YFGDCPVITAEGRTHPVTTYF 89
+ P+I + R +PV+ +F
Sbjct: 630 LFKTPPPIINVQARQYPVSIHF 651
Score = 70 (29.7 bits), Expect = 3.2e-35, Sum P(3) = 3.2e-35
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 174 DYDLLEDL---VCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
+YD LE+ C + EG IL+FL G EI L+ +L + F
Sbjct: 656 NYDYLEEAFKKTCKIHRKLPEGGILIFLTGQNEITTLVKKLRQEFPF 702
>UNIPROTKB|C9JEW8 [details] [associations]
symbol:DHX40 "Probable ATP-dependent RNA helicase DHX40"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000175261 HGNC:HGNC:18018 ChiTaRS:DHX40 EMBL:AC091271
EMBL:AC004167 IPI:IPI00789290 ProteinModelPortal:C9JEW8 SMR:C9JEW8
STRING:C9JEW8 Ensembl:ENST00000451169 ArrayExpress:C9JEW8
Bgee:C9JEW8 Uniprot:C9JEW8
Length = 731
Score = 260 (96.6 bits), Expect = 5.5e-35, Sum P(4) = 5.5e-35
Identities = 68/228 (29%), Positives = 112/228 (49%)
Query: 237 QKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWIS 296
Q+++FL PP IRK +I+TNI+ TS+TID + YV D G K+ +N + L + IS
Sbjct: 279 QRRIFLPPPPGIRKCVISTNISATSLTIDGIRYVVDGGFVKQLNHNPRLGLDILEVVPIS 338
Query: 297 XXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRI 356
G C+ +Y++ + + M + +PE++R L + L +K L++ +
Sbjct: 339 KSEALQRSGRAGRTSSGKCFRIYSKDFWNQCMPDHVIPEIKRTSLTSVVLTLKCLAIHDV 398
Query: 357 KIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGI 416
F L+PP E I A+ LY+ AI+ +T LG + + P+ + ++
Sbjct: 399 IRF--PYLDPPNERLILEALKQLYQCDAIDRSGHVTRLGLSMVEFPLPPHLTCAVIKAAS 456
Query: 417 FGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D E Q + L K G +D
Sbjct: 457 LDCEDLLLPIAAMLSVENVFIRPVDPEYQKEAEQRHRELAAKAGGFND 504
Score = 176 (67.0 bits), Expect = 5.5e-35, Sum P(4) = 5.5e-35
Identities = 35/85 (41%), Positives = 54/85 (63%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
++ GD NLT + +I+DE HER+L D L +LK L +++S + LKV++MSAT++
Sbjct: 58 HILGDPNLTKFSVIILDEAHERTLTTDILFGLLKKLFQEKSPNRKEHLKVVVMSATMELA 117
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYF 89
S +FG+CP+ GR +PV F
Sbjct: 118 KLSAFFGNCPIFDIPGRLYPVREKF 142
Score = 67 (28.6 bits), Expect = 5.5e-35, Sum P(4) = 5.5e-35
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 609 DGRRE-VHIHPSS-INSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
DGR VHIHPSS ++ Q E +++F E + T KV+ R IV P
Sbjct: 596 DGRGSPVHIHPSSALHEQETKLE--WIIFHEVLVTTKVYAR---IVCP 638
Score = 58 (25.5 bits), Expect = 1.5e-13, Sum P(4) = 1.5e-13
Identities = 33/117 (28%), Positives = 52/117 (44%)
Query: 184 HVDETCGEGAILVFLPGVAEIHI---LLDRLAAS----YRFGGPSSDWLLAL--HSSVAS 234
H++E G+ ILVFL G EI LL ++A S Y + D LL L + S+ +
Sbjct: 168 HLNEMAGD--ILVFLTGQFEIEKSCELLFQMAESVDYDYDVQDTTLDGLLILPCYGSMTT 225
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKE----NRYNSQKKL 287
V Q + +I K I + T +TI + V R + + N Q+++
Sbjct: 226 VSQTSLTFVTHIQIMKQISENQHSLTGLTIAGITGVSHHARPRNMTCNEKLNQQRRI 282
Score = 44 (20.5 bits), Expect = 5.5e-35, Sum P(4) = 5.5e-35
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 565 IVKAILCAGLYPNVAATEQG 584
+++ LCAG + NVA G
Sbjct: 570 VLRRCLCAGYFKNVARRSVG 589
Score = 44 (20.5 bits), Expect = 3.3e-32, Sum P(3) = 3.3e-32
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 443 KQNVERAKLALLTDKLEGLSDSNDSSTQSD 472
K+NV++ K + D L+ + ND + SD
Sbjct: 678 KENVKQLKDGISKDVLKKMQRRNDDKSISD 707
>FB|FBgn0003483 [details] [associations]
symbol:spn-E "spindle E" species:7227 "Drosophila
melanogaster" [GO:0007315 "pole plasm assembly" evidence=NAS]
[GO:0030720 "oocyte localization involved in germarium-derived egg
chamber formation" evidence=IMP] [GO:0030717 "karyosome formation"
evidence=IMP] [GO:0009951 "polarity specification of dorsal/ventral
axis" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI;TAS]
[GO:0009949 "polarity specification of anterior/posterior axis"
evidence=IMP] [GO:0007294 "germarium-derived oocyte fate
determination" evidence=IGI] [GO:0008298 "intracellular mRNA
localization" evidence=IMP;TAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0008186 "RNA-dependent ATPase
activity" evidence=TAS] [GO:0006403 "RNA localization"
evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;NAS] [GO:0003724
"RNA helicase activity" evidence=TAS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0009994 "oocyte differentiation"
evidence=NAS] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0030423 "targeting of mRNA for destruction involved in RNA
interference" evidence=IMP] [GO:0045451 "pole plasm oskar mRNA
localization" evidence=IMP] [GO:0006342 "chromatin silencing"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007317 "regulation of pole plasm oskar
mRNA localization" evidence=IMP] [GO:0016246 "RNA interference"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0046843
"dorsal appendage formation" evidence=IMP] [GO:0010529 "negative
regulation of transposition" evidence=IMP] [GO:0043186 "P granule"
evidence=IDA] [GO:0060213 "positive regulation of
nuclear-transcribed mRNA poly(A) tail shortening" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
InterPro:IPR001650 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00355 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 EMBL:AE014297 GO:GO:0005524
GO:GO:0005634 GO:GO:0007126 GO:GO:0009949 GO:GO:0007294
GO:GO:0008270 GO:GO:0007283 GO:GO:0003676 GO:GO:0006342
GO:GO:0030423 Pfam:PF00567 SMART:SM00333 PROSITE:PS50304
GO:GO:0007076 GO:GO:0001556 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0046843 GO:GO:0030720 GO:GO:0030717
eggNOG:COG1643 GeneTree:ENSGT00700000104393 GO:GO:0060213
GO:GO:0008026 GO:GO:0045451 GO:GO:0003724 GO:GO:0043186
GO:GO:0007317 GO:GO:0008186 GO:GO:0009951 EMBL:S79915 EMBL:BT029921
EMBL:BT100306 PIR:T13889 RefSeq:NP_476741.1 UniGene:Dm.21664
ProteinModelPortal:Q9VF26 SMR:Q9VF26 STRING:Q9VF26 PaxDb:Q9VF26
PRIDE:Q9VF26 EnsemblMetazoa:FBtr0083183 GeneID:41919
KEGG:dme:Dmel_CG3158 UCSC:CG3158-RA CTD:41919 FlyBase:FBgn0003483
InParanoid:Q9VF26 OMA:INDWFTI OrthoDB:EOG4V6WXM PhylomeDB:Q9VF26
GenomeRNAi:41919 NextBio:826268 Bgee:Q9VF26 Uniprot:Q9VF26
Length = 1434
Score = 313 (115.2 bits), Expect = 6.8e-35, Sum P(2) = 6.8e-35
Identities = 84/268 (31%), Positives = 130/268 (48%)
Query: 186 DETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPP 245
DE GA+L+FLPG+ EI + + L ++ S + +Q+ VF PP
Sbjct: 360 DEALRYGAVLIFLPGIYEIDTMAENLTCMLENDPNIKVSIVRCFSLMTPENQRDVFNPPP 419
Query: 246 EKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXX 305
RK+I+ TNIAE+SIT+ DV YV D K ++ SS+ W S
Sbjct: 420 PGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAG 479
Query: 306 XXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALE 365
++ G Y + +H Y++ M + +PEM R+PL L+ K+L++G L+ AL
Sbjct: 480 RVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEILALALS 539
Query: 366 PPKEEAITTAISVLYEVGA----IEG-----DEELTPLGHHLAKLPVDVLIGKMMLFGGI 416
PP I I +L EVGA ++G D +LT G +++LP+D ++++ G I
Sbjct: 540 PPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLIILGYI 599
Query: 417 FGCLSPILSISAFLSYKSPFIYPKDEKQ 444
F L + I+A LS F + Q
Sbjct: 600 FNMLEEAIIIAAGLSTPGLFAHEGGRSQ 627
Score = 155 (59.6 bits), Expect = 6.8e-35, Sum P(2) = 6.8e-35
Identities = 39/93 (41%), Positives = 54/93 (58%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L +K LT TH+++DEVHER DFLLIV++ LL S H +K+ILMSAT+D+
Sbjct: 223 LINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRH----VKIILMSATIDAKE 278
Query: 66 FSRYFGDC----PVITAEGRT-HPVTTYFLEDV 93
S YF PVIT R H + ++ + +
Sbjct: 279 LSDYFTTTNSIPPVITTNHRRKHSIEKFYRDQL 311
Score = 43 (20.2 bits), Expect = 3.6e-23, Sum P(2) = 3.6e-23
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 77 TAEGRTHPVTTYFLEDVYESINY 99
T G+T V Y L++ Y+S Y
Sbjct: 140 TGCGKTTQVPQYILDEAYKSGKY 162
>UNIPROTKB|E2RNZ9 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 OMA:INDWFTI EMBL:AAEX03006064
EMBL:AAEX03006065 EMBL:AAEX03006066 Ensembl:ENSCAFT00000029095
Uniprot:E2RNZ9
Length = 1127
Score = 352 (129.0 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 94/257 (36%), Positives = 132/257 (51%)
Query: 193 AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVI 252
++LVFLPG+ EI+ + + L + LHSSV +Q VFL P RK+I
Sbjct: 132 SVLVFLPGLGEINYMHELLTNMVH----KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKII 187
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKP 312
++TNIAE+S+T+ DV YV D + + S+ W S V
Sbjct: 188 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSK 247
Query: 313 GICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAI 372
G CY L R ++ + + +PEM R PL L++KLL +G + L+ AL PP I
Sbjct: 248 GYCYRLVHRDFWDSSIPDHVIPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDI 307
Query: 373 TTAISVLYEVGA--IEG---DE-----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
I +L EVGA + G DE ELT LG LA+LPV+ +GK+++ G +FGCL
Sbjct: 308 ERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDE 367
Query: 423 ILSISAFLSYKSPFIYP 439
L I+A LS K+ F P
Sbjct: 368 CLIIAAALSLKNFFAMP 384
Score = 108 (43.1 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 30/79 (37%), Positives = 43/79 (54%)
Query: 23 VHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFG--------DCP 74
VHER+ DFLL+V++ LL S +KVILMSAT++ F+ YF
Sbjct: 1 VHERTEDMDFLLLVVRKLLRTNSRF----VKVILMSATINCKEFADYFAVPVQNKMNPAY 56
Query: 75 VITAEGRTHPVTTYFLEDV 93
V EG+ H + Y+L+D+
Sbjct: 57 VFEVEGKPHSIEEYYLDDL 75
>CGD|CAL0002969 [details] [associations]
symbol:orf19.107 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
CGD:CAL0002969 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 KO:K14781 EMBL:AACQ01000106 RefSeq:XP_714316.1
GeneID:3644014 KEGG:cal:CaO19.107 Uniprot:Q59XP9
Length = 831
Score = 278 (102.9 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 82/266 (30%), Positives = 136/266 (51%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHIL---LDRLAASYRFGGPSSDWL 225
+ED++D + + +++E EG +L FLPG EI L++LA P
Sbjct: 369 SEDIVDTMIRSIIQINLNEP--EGDVLCFLPGQEEIDNCVKSLEQLAPQLPREAPLIV-P 425
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
L L+++++ Q K+F + P+ RKVI+ATNIAETSIT+ V YV D G K +
Sbjct: 426 LPLYAALSPGQQSKIFEKLPKGRRKVILATNIAETSITVSGVKYVIDSGLRKIKVWKHNL 485
Query: 286 KLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
LS+++ IS G + LY Y L + Q E++R ++
Sbjct: 486 GLSTLLTTPISQASARQRAGRAGRESEGKVFRLYPESTYMALPKQ-QESEIKRNDIILPV 544
Query: 346 LQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDV 405
L +K LG + LE P ++AI +A++ LY +GA+ ++T LG+ ++ LP+
Sbjct: 545 LTLK--KLGVDDLLNWSWLEYPGQDAILSALNTLYTLGALNDSGKVTTLGYKMSILPLPP 602
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLS 431
+ +++ FG LSP++ I++ LS
Sbjct: 603 QLSVVLITAAEFGVLSPVIDIASCLS 628
Score = 181 (68.8 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 34/89 (38%), Positives = 59/89 (66%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D NLT + +I+DE HER++L D ++ LK ++ D LK+++MSAT+++ LFS
Sbjct: 287 DSNLTKYSTIILDEAHERTILTDLIMGFLKQIITSGKRKD---LKIVVMSATLNAELFSN 343
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESI 97
+FG+ P++ EG+ +PV+ ++L+ E I
Sbjct: 344 FFGNAPILYIEGKMYPVSQFYLDAESEDI 372
>UNIPROTKB|I3LA09 [details] [associations]
symbol:I3LA09 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR007502 Pfam:PF04408
SMART:SM00847 GO:GO:0005739 GO:GO:0004386
GeneTree:ENSGT00550000074257 EMBL:CU856640
Ensembl:ENSSSCT00000031298 Uniprot:I3LA09
Length = 183
Score = 380 (138.8 bits), Expect = 2.3e-34, P = 2.3e-34
Identities = 78/168 (46%), Positives = 110/168 (65%)
Query: 287 LSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCL 346
+SS+VE ++S V+ G C+ +YTR R+E M Y VPE+ R+PL ELCL
Sbjct: 1 MSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCL 59
Query: 347 QIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDV 405
I +LG + FLSKAL+PP+ + I+ A+ +L ++GA E +E +LTPLG HLA LPV+V
Sbjct: 60 HIMKCNLGSPEDFLSKALDPPQLQVISNAMHLLRKIGACELNEPKLTPLGQHLAALPVNV 119
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLAL 453
IGKM++FG IFGCL P+ +++A ++ KSPF P K + AK AL
Sbjct: 120 KIGKMLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSAL 167
>POMBASE|SPAC2G11.11c [details] [associations]
symbol:prh1 "ATP-dependent RNA helicase Prh1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0042254 "ribosome
biogenesis" evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00382 SMART:SM00490 SMART:SM00847
PomBase:SPAC2G11.11c GO:GO:0005524 EMBL:CU329670 GO:GO:0005730
GenomeReviews:CU329670_GR GO:GO:0006397 GO:GO:0042254 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 HOGENOM:HOG000175261
KO:K14781 OrthoDB:EOG4F7RTB EMBL:D13249 PIR:S35546 PIR:S62466
RefSeq:NP_593091.1 ProteinModelPortal:Q03319
EnsemblFungi:SPAC2G11.11c.1 GeneID:2541750 KEGG:spo:SPAC2G11.11c
OMA:MANDTTI NextBio:20802841 Uniprot:Q03319
Length = 719
Score = 318 (117.0 bits), Expect = 2.5e-34, Sum P(4) = 2.5e-34
Identities = 82/266 (30%), Positives = 139/266 (52%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSS-DWLLA--LHSSVASVDQKKVFLRPPEKI 248
G ILVFL G EI L + L SY PS+ + A L +S+ Q +VFL
Sbjct: 305 GDILVFLTGQDEIEAL-EALIKSYSKQLPSNLPQIQACPLFASLPQEQQLQVFLPALANH 363
Query: 249 RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXX 308
RKV+++TNIAETS+TI + YV D G K ++NS+ L S+ IS
Sbjct: 364 RKVVLSTNIAETSVTISGIRYVIDTGLAKIKQFNSKLGLESLTVQPISQSAAMQRSGRAG 423
Query: 309 XVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPK 368
G CY +YT ++KL + +PE++R+ L + L +K + G+ + ++PP
Sbjct: 424 REAAGQCYRIYTEADFDKLPKE-TIPEIKRIDLSQAVLTLK--ARGQNDVINFHYMDPPS 480
Query: 369 EEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISA 428
+E + A+ LY +GA++ + + LG+ ++ +P+ + + +L CLS ++ + +
Sbjct: 481 KEGLLRALEHLYSIGALDDNGHINDLGYQMSLIPLLPSLARAVLAAREHNCLSEVIDVVS 540
Query: 429 FLSYKSPFIYPKDEKQNVERAKLALL 454
LS S F++P++++ A+L L
Sbjct: 541 CLSTDSMFLFPQEKRDEAIEARLKFL 566
Score = 131 (51.2 bits), Expect = 2.5e-34, Sum P(4) = 2.5e-34
Identities = 30/84 (35%), Positives = 50/84 (59%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L D L+ +I+DE HER+L+ D LL +K +++K+ P L+VI+MSAT+++
Sbjct: 201 LINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKR-----PALRVIIMSATLNAER 255
Query: 66 FSRYFGDCPVITAEGRTHPVTTYF 89
FS +F + GR +PV ++
Sbjct: 256 FSEFFDGAEICYISGRQYPVQIHY 279
Score = 43 (20.2 bits), Expect = 2.5e-34, Sum P(4) = 2.5e-34
Identities = 12/50 (24%), Positives = 27/50 (54%)
Query: 469 TQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQ 518
++ D L + A +++ L+ + +Q+CS+ F++ + I D+R Q
Sbjct: 568 SEGDLLTCLNALRQY----LESSHDSRKQWCSQNFINRRALKTILDIRKQ 613
Score = 40 (19.1 bits), Expect = 2.5e-34, Sum P(4) = 2.5e-34
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 610 GRREVHIHPSS--INSQLKSFEHPFLVFLEK 638
G + + IHPSS ++++ + LVF K
Sbjct: 662 GNQTISIHPSSSLFGKKVEAIMYHELVFTTK 692
>UNIPROTKB|J9P8U1 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000043378 Uniprot:J9P8U1
Length = 1120
Score = 361 (132.1 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 104/302 (34%), Positives = 151/302 (50%)
Query: 193 AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVI 252
++LVFLPG+ EI+ + + L + LHSSV +Q VFL P RK+I
Sbjct: 125 SVLVFLPGLGEINYMHELLTNMVH----KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKII 180
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKP 312
++TNIAE+S+T+ DV YV D + + S+ W S V
Sbjct: 181 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSK 240
Query: 313 GICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAI 372
G CY L R ++ + + +PEM R PL L++KLL +G + L+ AL PP I
Sbjct: 241 GYCYRLVHRDFWDSSIPDHVIPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDI 300
Query: 373 TTAISVLYEVGA--IEG---DE-----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
I +L EVGA + G DE ELT LG LA+LPV+ +GK+++ G +FGCL
Sbjct: 301 ERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDE 360
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
L I+A LS K+ F P + + R K+ G +++SD + L+ A+K
Sbjct: 361 CLIIAAALSLKNFFAMPFRQHLDGYRNKV-----NFSG-------NSKSDCIALVEAFKT 408
Query: 483 WQ 484
WQ
Sbjct: 409 WQ 410
Score = 95 (38.5 bits), Expect = 2.9e-34, Sum P(2) = 2.9e-34
Identities = 26/71 (36%), Positives = 38/71 (53%)
Query: 31 DFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFG--------DCPVITAEGRT 82
DFLL+V++ LL S +KVILMSAT++ F+ YF V EG+
Sbjct: 2 DFLLLVVRKLLRTNSRF----VKVILMSATINCKEFADYFAVPVQNKMNPAYVFEVEGKP 57
Query: 83 HPVTTYFLEDV 93
H + Y+L+D+
Sbjct: 58 HSIEEYYLDDL 68
>WB|WBGene00022056 [details] [associations]
symbol:Y67D2.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
GeneTree:ENSGT00700000104241 EMBL:FO081642 RefSeq:NP_497420.1
ProteinModelPortal:Q9BKQ8 SMR:Q9BKQ8 MINT:MINT-1068531
STRING:Q9BKQ8 PaxDb:Q9BKQ8 EnsemblMetazoa:Y67D2.6 GeneID:175308
KEGG:cel:CELE_Y67D2.6 UCSC:Y67D2.6 CTD:175308 WormBase:Y67D2.6
InParanoid:Q9BKQ8 KO:K13117 OMA:NIFVVPP NextBio:887600
Uniprot:Q9BKQ8
Length = 732
Score = 323 (118.8 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 81/278 (29%), Positives = 136/278 (48%)
Query: 180 DLVCHVDETCGEGAILVFLPGVAEIHILLDRLAA-SYRFGGPSSDWLLALHSSVASVDQK 238
D V ++ + G ILVFL G E+ + ++L + W++ + ++ + +Q
Sbjct: 285 DTVINIHKHENPGDILVFLTGQDEVEDVCEKLRELAGNLKNCDRLWVVPCYGALPAREQM 344
Query: 239 KVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXX 298
K F P RKV++ATNIAE SITI + YV D G K ++ + +++ +S
Sbjct: 345 KAFDSTPHGTRKVVVATNIAEASITIPGICYVIDTGYVKLRAQHAANGVETLMRVTVSKA 404
Query: 299 XXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKI 358
++PG CY LY +E+ VPE+QR + LQ+K L + +
Sbjct: 405 SAEQRAGRAGRIRPGKCYRLYPESEFERFAEG-TVPEIQRCQMASTILQLKALGVQNVHR 463
Query: 359 FLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKLPVDVLIGKMMLFGGIF 417
F L PP A+ + +LY +GAI+ +LT PLG +A+ P+ + K +L F
Sbjct: 464 F--HYLSPPPSWAMINGLELLYALGAIDETSQLTSPLGLQMAEFPLPPMHSKCLLKSAEF 521
Query: 418 GCLSPILSISAFLSYKSPFIYPKDEKQNVE--RAKLAL 453
GC + +++I A + + FI P ++ + R K A+
Sbjct: 522 GCSTEMVTIVAMMQIQDVFITPYRQRHQADVIRKKFAV 559
Score = 113 (44.8 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 32/90 (35%), Positives = 52/90 (57%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L+ + +++DE HERS D LL +L+ ++ Q +D L++I+ SAT+D+ LF
Sbjct: 186 DPLLSKYSIIMIDEAHERSCNTDILLGLLRKII--QIRND---LRIIVSSATLDAELFKD 240
Query: 69 YF-----GDCP-----VITAEGRTHPVTTY 88
+F G+ +I+ EGRTHPV +
Sbjct: 241 FFEMNETGNSDKDTAGIISVEGRTHPVAVH 270
>UNIPROTKB|E2RNZ8 [details] [associations]
symbol:TDRD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR007502
Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 InterPro:IPR002999 GO:GO:0005524 GO:GO:0003676
GO:GO:0004386 Pfam:PF00567 PROSITE:PS50304
GeneTree:ENSGT00700000104393 EMBL:AAEX03006064 EMBL:AAEX03006065
EMBL:AAEX03006066 Ensembl:ENSCAFT00000029096 Uniprot:E2RNZ8
Length = 1115
Score = 361 (132.1 bits), Expect = 3.6e-32, Sum P(2) = 3.6e-32
Identities = 104/302 (34%), Positives = 151/302 (50%)
Query: 193 AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVI 252
++LVFLPG+ EI+ + + L + LHSSV +Q VFL P RK+I
Sbjct: 120 SVLVFLPGLGEINYMHELLTNMVH----KRLQVYPLHSSVTLEEQNNVFLSPVPGYRKII 175
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKP 312
++TNIAE+S+T+ DV YV D + + S+ W S V
Sbjct: 176 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSK 235
Query: 313 GICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAI 372
G CY L R ++ + + +PEM R PL L++KLL +G + L+ AL PP I
Sbjct: 236 GYCYRLVHRDFWDSSIPDHVIPEMLRCPLGSTVLKVKLLDMGEPRALLATALSPPSLSDI 295
Query: 373 TTAISVLYEVGA--IEG---DE-----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
I +L EVGA + G DE ELT LG LA+LPV+ +GK+++ G +FGCL
Sbjct: 296 ERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDE 355
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
L I+A LS K+ F P + + R K+ G +++SD + L+ A+K
Sbjct: 356 CLIIAAALSLKNFFAMPFRQHLDGYRNKV-----NFSG-------NSKSDCIALVEAFKT 403
Query: 483 WQ 484
WQ
Sbjct: 404 WQ 405
Score = 75 (31.5 bits), Expect = 3.6e-32, Sum P(2) = 3.6e-32
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 35 IVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFG--------DCPVITAEGRTHPVT 86
+V++ LL S +KVILMSAT++ F+ YF V EG+ H +
Sbjct: 1 LVVRKLLRTNSRF----VKVILMSATINCKEFADYFAVPVQNKMNPAYVFEVEGKPHSIE 56
Query: 87 TYFLEDV 93
Y+L+D+
Sbjct: 57 EYYLDDL 63
>UNIPROTKB|F1NWM3 [details] [associations]
symbol:DHX40 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00700000104421 OMA:LYGSMPT EMBL:AADN02025787
IPI:IPI00583149 Ensembl:ENSGALT00000008234 Uniprot:F1NWM3
Length = 730
Score = 291 (107.5 bits), Expect = 4.1e-32, Sum P(3) = 4.1e-32
Identities = 94/292 (32%), Positives = 145/292 (49%)
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRL---AAS--YRFG--GPSSDWLLAL--HSSVAS 234
H++E EG ILVFL G EI D L A S YR+ S + LL L + S+++
Sbjct: 216 HLNEP--EGDILVFLTGQIEIEKACDLLFKKAESIDYRYEVHDRSIEGLLILPLYGSMST 273
Query: 235 VDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDW 294
QK++FL P+ IRK +++TNIA TS+TI+ V YV D G K+ +N + L +
Sbjct: 274 DQQKRIFLPAPKGIRKCVVSTNIAATSLTIEGVRYVVDSGFVKQLNHNPRVGLDILEVVP 333
Query: 295 ISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLG 354
IS G Y LY+ +E+ M + VPE++R L + L +K LS+
Sbjct: 334 ISKSEAMQRAGRAGRTSSGKSYRLYSTEFWEQCMPDHTVPEIKRTSLTSVILTLKCLSVH 393
Query: 355 RIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE--LTPLGHHLAKLPVDVLIGKMML 412
+ F L+ P+E I A+ LY+ AI+ +T LG L + P+ + ++
Sbjct: 394 DVIRF--PYLDRPEERHILEALKQLYQCDAIDRTRRGHVTRLGEFLVQFPLPPNLSCAVI 451
Query: 413 FGGIFGCLSPILSISAFLSYKSPFIYPKD-EKQNVERAKLALLTDKLEGLSD 463
C +L I+A LS ++ FI P D +KQ + L+ ++ G +D
Sbjct: 452 KAASLDCEDMLLPIAAMLSVENVFIRPGDPQKQKEAELQHQELSSQVGGCND 503
Score = 144 (55.7 bits), Expect = 4.1e-32, Sum P(3) = 4.1e-32
Identities = 32/86 (37%), Positives = 52/86 (60%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDL-LEKQSAHDTPKLKVILMSATVDS 63
++ D L+ + +I+DE HERSL D L +LK L L+ + ++KV++MSAT++
Sbjct: 105 HILADPLLSKYSIIILDEAHERSLSTDILFGLLKKLFLQNKPPGRKTEMKVVVMSATLEV 164
Query: 64 NLFSRYFGDCPVITAEGRTHPVTTYF 89
+ S +FG C V+ GR++PV F
Sbjct: 165 DKLSEFFGHCSVLHIPGRSYPVKEIF 190
Score = 41 (19.5 bits), Expect = 4.1e-32, Sum P(3) = 4.1e-32
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 561 NHSSIVKAILCAGLYPNVA 579
+ + +++ LCAG + NVA
Sbjct: 565 SRTELLRRCLCAGYFINVA 583
Score = 38 (18.4 bits), Expect = 4.5e-05, Sum P(3) = 4.5e-05
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 159 EQTRQ-NLKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHI 206
++TR+ ++ RL E ++ + L +L C V + + LP A + +
Sbjct: 423 DRTRRGHVTRLGEFLVQFPLPPNLSCAVIKAASLDCEDMLLPIAAMLSV 471
>TAIR|locus:2125211 [details] [associations]
symbol:AT4G01020 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS50157 PROSITE:PS51194 SMART:SM00184
SMART:SM00322 SMART:SM00355 SMART:SM00490 SMART:SM00647
SMART:SM00847 Pfam:PF00097 Prosite:PS00518 GO:GO:0005524
GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:3.30.40.10 InterPro:IPR013083
InterPro:IPR017907 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 HSSP:P38398 GO:GO:0008026
EMBL:AL161491 EMBL:AL080237 KO:K12818 PIR:T10542 IPI:IPI00547897
RefSeq:NP_567206.1 UniGene:At.42970 ProteinModelPortal:P0CE10
SMR:P0CE10 PRIDE:P0CE10 EnsemblPlants:AT4G01020.1 GeneID:826439
KEGG:ath:AT4G01020 GeneFarm:1806 TAIR:At4g01020
HOGENOM:HOG000084497 PhylomeDB:P0CE10 Uniprot:P0CE10
Length = 1787
Score = 282 (104.3 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 99/320 (30%), Positives = 151/320 (47%)
Query: 181 LVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
+ + +T EG IL FL AE+ +R A PS+ L LH ++ +Q V
Sbjct: 511 MAVEIHKTEKEGTILAFLTSQAEVEWACERFVA------PSAI-ALPLHGKLSFEEQFMV 563
Query: 241 FLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXX 300
F P + RKVI ATNIAETS+TI V YV D G KE++Y + +S + +S
Sbjct: 564 FQNYPGR-RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCQVSQSSA 622
Query: 301 XXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFL 360
+PG CY LY++ ++ M Q PE++R+ L + L +++L+LG I
Sbjct: 623 RQRAGRAGRTEPGRCYRLYSKTDFDS-MNLNQEPEIRRVHL-GVAL-LRMLALGIDNIAA 679
Query: 361 SKALEPPKEEAITTAISVLYEVGAI---EGDEELTPLGHHLAKLPVDVLIGKMML--FGG 415
+ ++ P EAI AI L ++GA+ G ELT GH L KL ++ +GK++L F
Sbjct: 680 FEFVDAPVPEAIAMAIQNLVQLGAVVEKNGVLELTQEGHCLVKLGLEPKLGKLILGCFRH 739
Query: 416 IFGCLSPILSISAFLSYKSPF--IYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDH 473
G +L+ + + S F + D+K +R K+ D D
Sbjct: 740 RMGKEGIVLA-AVMANASSIFCRVGNFDDKMKADRLKVQFCNDN-------------GDL 785
Query: 474 LVLMVAYKKWQKILLKRGTK 493
L+ YK+W + R K
Sbjct: 786 FTLLSVYKEWASLPRDRRNK 805
Score = 163 (62.4 bits), Expect = 4.4e-32, Sum P(2) = 4.4e-32
Identities = 37/85 (43%), Positives = 55/85 (64%)
Query: 4 CYLQG---DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSAT 60
C LQ D++L+G++ VI+DE HERSL D LL +L+ LL ++ D L++++MSAT
Sbjct: 404 CLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLRKLLSRRI--D---LRLVIMSAT 458
Query: 61 VDSNLFSRYFGDCPVITAEGRTHPV 85
D+N S+Y DC ++ GR PV
Sbjct: 459 ADANQLSQYLFDCGILHVNGRNFPV 483
Score = 39 (18.8 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 18/50 (36%), Positives = 23/50 (46%)
Query: 203 EIHILLDRLAASYRFGGPSSDWLLALHSSVASV-D-----QKKVFLRPPE 246
E +ILLDR + R G S A V S+ D Q ++ LR PE
Sbjct: 1437 ETYILLDRHNLTVRICGTSEKIAKAEQELVQSLMDYHESKQLEIHLRGPE 1486
>UNIPROTKB|F1MVJ1 [details] [associations]
symbol:DHX38 "Pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16" species:9913 "Bos taurus" [GO:0071013 "catalytic
step 2 spliceosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR007502
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 GeneTree:ENSGT00700000104421 OMA:PSRSTWE
IPI:IPI00690755 EMBL:DAAA02046748 EMBL:DAAA02046749
Ensembl:ENSBTAT00000045480 ArrayExpress:F1MVJ1 Uniprot:F1MVJ1
Length = 1226
Score = 304 (112.1 bits), Expect = 6.7e-32, Sum P(2) = 6.7e-32
Identities = 95/333 (28%), Positives = 163/333 (48%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF--GGPSSD 223
K ED ++ + + L H+ G+ IL+F+PG +I + D++ P+
Sbjct: 717 KTPQEDYVEAAVKQSLQVHLSGAPGD--ILIFMPGQEDIEVTSDQIVEHLEELENAPALA 774
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
+L ++S + S Q K+F + P+ +RK I+ATNIAETS+T+D +++V D G K +
Sbjct: 775 -VLPIYSQLPSDLQAKIFQKAPDGVRKCIVATNIAETSLTVDGIMFVIDSGYCKLKVSSP 833
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
S + I P C LYT+ Y+ + VPE+QR L
Sbjct: 834 SLGGSDLKIMEIQKIQKNINTGCSGCTSPRCC-RLYTQSAYKNELLTTTVPEIQRTNLAN 892
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
+ L +K SLG + ++PP E+ + ++ L+ +GA++ LT G + + P+
Sbjct: 893 VVLLLK--SLGVQDLLQFHFMDPPPEDNMLNSMYQLWILGALDNTGGLTSTGRLMVEFPL 950
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPK--DEKQNVERAKLALL-TDKLEG 460
D + KM++ GC S IL I + LS + F PK +E+ + R K A+ +D L
Sbjct: 951 DPALSKMLIVSCDMGCSSEILLIVSMLSVPAIFYRPKGREEESDQIREKFAVPESDHLSY 1010
Query: 461 LS-----DSNDSSTQ--SDHLVLMVAYKKWQKI 486
L+ +N+ ST +DH + A +K +++
Sbjct: 1011 LNVYLQWKNNNYSTIWCNDHFIHAKAMRKVREV 1043
Score = 134 (52.2 bits), Expect = 6.7e-32, Sum P(2) = 6.7e-32
Identities = 30/81 (37%), Positives = 50/81 (61%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ +L + +I+DE HERSL D L +L++++ ++S LK+I+ SAT+D+ F+
Sbjct: 640 EADLDHYSAIIMDEAHERSLNTDVLFGLLREVVARRS-----DLKLIVTSATMDAEKFAS 694
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+FG+ P+ GRT PV F
Sbjct: 695 FFGNVPIFHIPGRTFPVDILF 715
Score = 58 (25.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 470 QSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+SDHL + Y +W + + +C+ +F+ + M +R++R Q ++
Sbjct: 1004 ESDHLSYLNVYLQW------KNNNYSTIWCNDHFIHAKAMRKVREVRAQLKDIM 1051
Score = 39 (18.8 bits), Expect = 5.8e-22, Sum P(2) = 5.8e-22
Identities = 8/18 (44%), Positives = 10/18 (55%)
Query: 77 TAEGRTHPVTTYFLEDVY 94
T G+T +T Y ED Y
Sbjct: 557 TGSGKTTQLTQYLHEDGY 574
>TAIR|locus:2142459 [details] [associations]
symbol:AT5G10370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR018957
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR002867
InterPro:IPR004087 InterPro:IPR007087 InterPro:IPR007502
InterPro:IPR011545 InterPro:IPR015880 Pfam:PF00270 Pfam:PF00271
Pfam:PF01485 Pfam:PF04408 PROSITE:PS00028 PROSITE:PS00690
PROSITE:PS50089 PROSITE:PS51194 SMART:SM00184 SMART:SM00322
SMART:SM00355 SMART:SM00490 SMART:SM00647 SMART:SM00847
Pfam:PF00097 Prosite:PS00518 GO:GO:0005524 EMBL:CP002688
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR017907
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 KO:K12818 IPI:IPI00548793
RefSeq:NP_196599.2 UniGene:At.49004 PRIDE:F4KGU4
EnsemblPlants:AT5G10370.1 GeneID:830901 KEGG:ath:AT5G10370
OMA:HQEPEIR ArrayExpress:F4KGU4 Uniprot:F4KGU4
Length = 1775
Score = 280 (103.6 bits), Expect = 7.2e-32, Sum P(2) = 7.2e-32
Identities = 82/235 (34%), Positives = 124/235 (52%)
Query: 181 LVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
+ + +T EG IL FL AE+ A RF PS+ L LH ++ +Q +V
Sbjct: 514 MAVEIHKTEKEGTILAFLTSQAEVEW------ACERFITPSAI-ALPLHGKLSFEEQFRV 566
Query: 241 FLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXX 300
F P + RKVI ATNIAETS+TI V YV D G KE++Y + +S + +S
Sbjct: 567 FQNHPGR-RKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGMSILKVCRVSQSSA 625
Query: 301 XXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFL 360
+PG CY LY+++ ++ M Q PE++R+ L + L +++L+LG I
Sbjct: 626 RQRAGRAGRTEPGRCYRLYSKNDFDS-MNLNQEPEIRRVHL-GVAL-LRMLALGVNNIAE 682
Query: 361 SKALEPPKEEAITTAISVLYEVGAI---EGDEELTPLGHHLAKLPVDVLIGKMML 412
++ P EAI A+ L ++GA+ G ELT GH L KL ++ +GK++L
Sbjct: 683 FNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVHELTQEGHCLVKLGLEPKLGKLIL 737
Score = 261 (96.9 bits), Expect = 8.5e-30, Sum P(2) = 8.5e-30
Identities = 89/288 (30%), Positives = 139/288 (48%)
Query: 213 ASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFD 272
A RF PS+ L LH ++ +Q +VF P + RKVI ATNIAETS+TI V YV D
Sbjct: 540 ACERFITPSAI-ALPLHGKLSFEEQFRVFQNHPGR-RKVIFATNIAETSLTIPGVKYVID 597
Query: 273 CGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQ 332
G KE++Y + +S + +S +PG CY LY+++ ++ M Q
Sbjct: 598 SGMVKESKYEPRTGMSILKVCRVSQSSARQRAGRAGRTEPGRCYRLYSKNDFDS-MNLNQ 656
Query: 333 VPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAI---EGDE 389
PE++R+ L + L +++L+LG I ++ P EAI A+ L ++GA+ G
Sbjct: 657 EPEIRRVHL-GVAL-LRMLALGVNNIAEFNFVDAPVPEAIAMAVQNLVQLGAVVEKNGVH 714
Query: 390 ELTPLGHHLAKLPVDVLIGKMML--FGGIFGCLSPILSISAFLSYKSPF--IYPKDEKQN 445
ELT GH L KL ++ +GK++L F G +L+ + + S F + D+K
Sbjct: 715 ELTQEGHCLVKLGLEPKLGKLILGCFRHRMGKEGIVLA-AVMANASSIFCRVGNFDDKMK 773
Query: 446 VERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTK 493
+R K+ D L+ YK+W + +R K
Sbjct: 774 ADRLKVQFCNQN-------------GDLFTLLSVYKEWASLPRERRNK 808
Score = 163 (62.4 bits), Expect = 7.2e-32, Sum P(2) = 7.2e-32
Identities = 40/97 (41%), Positives = 58/97 (59%)
Query: 4 CYLQG---DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSAT 60
C LQ D++L+G++ VI+DE HERSL D LL +LK LL ++ D L++++MSAT
Sbjct: 407 CLLQHYMKDRSLSGISCVIIDEAHERSLNTDLLLALLKKLLSRRI--D---LRLVIMSAT 461
Query: 61 VDSNLFSRYFGDCPVITAEGRTHPVT-TYFLEDVYES 96
D+ S+YF C ++ GR PV Y D E+
Sbjct: 462 ADAKQLSQYFFSCGILLVNGRNFPVEIVYSPSDTEEN 498
Score = 37 (18.1 bits), Expect = 3.6e-06, Sum P(2) = 3.6e-06
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 203 EIHILLDRLAASYRFGGPSSDWLLALHSSV-ASVD-----QKKVFLRPPE 246
E +ILLDR + R G S A + A +D Q ++ LR PE
Sbjct: 1440 ETYILLDRHNLTVRICGTSEKIAKAEQELIQALMDYHESKQLEIHLRGPE 1489
>UNIPROTKB|H0YJJ2 [details] [associations]
symbol:TDRD9 "Putative ATP-dependent RNA helicase TDRD9"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 InterPro:IPR002999 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 Pfam:PF00567 SMART:SM00333
PROSITE:PS50304 EMBL:AL136001 EMBL:AL132712 HGNC:HGNC:20122
Ensembl:ENST00000557332 Uniprot:H0YJJ2
Length = 918
Score = 361 (132.1 bits), Expect = 7.7e-32, Sum P(3) = 7.7e-32
Identities = 105/302 (34%), Positives = 153/302 (50%)
Query: 193 AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIRKVI 252
++LVFLPG+ EI+ + + L + + LHSSVA +Q VFL P RK+I
Sbjct: 114 SVLVFLPGLGEINYMHELLTSLVH----KRLQVYPLHSSVALEEQNNVFLSPVPGYRKII 169
Query: 253 IATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXXVKP 312
++TNIAE+S+T+ DV YV D + + S+ W S V
Sbjct: 170 LSTNIAESSVTVPDVKYVIDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSR 229
Query: 313 GICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEEAI 372
G CY L + ++ + + VPEM R PL L++KLL +G + L+ AL PP I
Sbjct: 230 GYCYRLVHKDFWDNSIPDHVVPEMLRCPLGSTILKVKLLDMGEPRALLATALSPPGLSDI 289
Query: 373 TTAISVLYEVGA--IEG---DE-----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
I +L EVGA + G DE ELT LG LA+LPV+ +GK+++ G +FGCL
Sbjct: 290 ERTILLLKEVGALAVSGQREDENPHDGELTFLGRVLAQLPVNQQLGKLIVLGHVFGCLDE 349
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
L I+A LS K+ F P + + R K+ G S++SD + L+ A+K
Sbjct: 350 CLIIAAALSLKNFFAMPFRQHLDGYRNKV-----NFSG-------SSKSDCIALVEAFKT 397
Query: 483 WQ 484
W+
Sbjct: 398 WK 399
Score = 71 (30.1 bits), Expect = 7.7e-32, Sum P(3) = 7.7e-32
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 52 LKVILMSATVDSNLFSRYFGDCPV---------ITAEGRTHPVTTYFLEDVYESINY 99
+KV+LMSAT+ F+ YF PV EG+ H V Y+L D+ E I++
Sbjct: 8 VKVVLMSATISCKEFADYFA-VPVQNKMNPAYIFEVEGKPHSVEEYYLNDL-EHIHH 62
Score = 40 (19.1 bits), Expect = 7.7e-32, Sum P(3) = 7.7e-32
Identities = 15/55 (27%), Positives = 21/55 (38%)
Query: 571 CAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVH-IHPSSINSQ 624
C L P A Q +A L L S K P W++ E + + P + Q
Sbjct: 840 CKCLGPERVAQLQDIARQKLLGLFCQSKPREKIVPKWHEKPYEWNQVDPKLVMEQ 894
>SGD|S000004735 [details] [associations]
symbol:ECM16 "Essential DEAH-box ATP-dependent RNA helicase
specific to U3 snoRNP" species:4932 "Saccharomyces cerevisiae"
[GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0000462 "maturation
of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0042254 "ribosome biogenesis"
evidence=IEA;IDA;TAS] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0030686 "90S
preribosome" evidence=IDA] [GO:0003724 "RNA helicase activity"
evidence=IDA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 SGD:S000004735 GO:GO:0005739 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:BK006946 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0030686 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0032040 GO:GO:0008026
GO:GO:0003724 GO:GO:0000462 EMBL:Z48622 PIR:S53058
RefSeq:NP_013847.1 ProteinModelPortal:Q04217 SMR:Q04217
DIP:DIP-6722N IntAct:Q04217 MINT:MINT-614026 STRING:Q04217
PaxDb:Q04217 PeptideAtlas:Q04217 PRIDE:Q04217 EnsemblFungi:YMR128W
GeneID:855158 KEGG:sce:YMR128W CYGD:YMR128w
GeneTree:ENSGT00550000074985 HOGENOM:HOG000201240 KO:K14780
OMA:HQLKREE OrthoDB:EOG4KM2B8 NextBio:978575 Genevestigator:Q04217
GermOnline:YMR128W Uniprot:Q04217
Length = 1267
Score = 320 (117.7 bits), Expect = 7.9e-32, Sum P(4) = 7.9e-32
Identities = 73/214 (34%), Positives = 112/214 (52%)
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
++L L+S + + +Q +VF +PP+ R I+ATN+AETS+TI V YV D GR KE +YN
Sbjct: 730 YVLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNE 789
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ S W+S PG CY LY+ +E + PE+ RMP+
Sbjct: 790 SNGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYSSAVFEHDFEQFSKPEILRMPVES 849
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
+ LQ+K +++ I F PP A++ AI +L +GA++ E +T G ++ P+
Sbjct: 850 IVLQMKSMAIHNIINFPFPT--PPDRVALSKAIQLLQYLGALDNKEMITEDGKKMSLFPL 907
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFI 437
KM+L CL I++I + LS PFI
Sbjct: 908 SPRFSKMLLVSDEKACLPYIVAIVSALSVGDPFI 941
Score = 105 (42.0 bits), Expect = 7.9e-32, Sum P(4) = 7.9e-32
Identities = 31/91 (34%), Positives = 50/91 (54%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLL------IVLKDLLEKQSAHDTPKLKVILMSATVD 62
D LT + +I+DE HER++ D L+ + L+ L K++ + KLK+I+MSAT+
Sbjct: 504 DFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHKENPIEHKKLKLIIMSATLR 563
Query: 63 SNLFSR---YFGDCP-VITAEGRTHPVTTYF 89
+ FS F P V+ + R PV+ +F
Sbjct: 564 VSDFSENKTLFPIAPPVLQVDARQFPVSIHF 594
Score = 61 (26.5 bits), Expect = 7.9e-32, Sum P(4) = 7.9e-32
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
C + + GAILVFL G EI ++ RL + F
Sbjct: 611 CKIHQKLPPGAILVFLTGQQEITHMVKRLRKEFPF 645
Score = 39 (18.8 bits), Expect = 7.9e-32, Sum P(4) = 7.9e-32
Identities = 7/22 (31%), Positives = 14/22 (63%)
Query: 614 VHIHPSSINSQLKSFEHPFLVF 635
V+IHP+SI + L ++++
Sbjct: 1133 VYIHPTSILNNLGEMPPKYMLY 1154
>POMBASE|SPAC20H4.09 [details] [associations]
symbol:SPAC20H4.09 "ATP-dependent RNA helicase,
spliceosomal (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IC;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0045292 "mRNA cis splicing,
via spliceosome" evidence=ISS] [GO:0071276 "cellular response to
cadmium ion" evidence=IMP] [GO:0071585 "detoxification of cadmium
ion" evidence=IMP] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAC20H4.09
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 EMBL:CU329670
GO:GO:0008380 GO:GO:0071276 GO:GO:0071585 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004
HOGENOM:HOG000175261 RefSeq:NP_593629.1 ProteinModelPortal:Q9HE06
EnsemblFungi:SPAC20H4.09.1 GeneID:2542874 KEGG:spo:SPAC20H4.09
OMA:NYSVIIL OrthoDB:EOG4BGD47 NextBio:20803914 Uniprot:Q9HE06
Length = 647
Score = 282 (104.3 bits), Expect = 9.6e-32, Sum P(3) = 9.6e-32
Identities = 86/284 (30%), Positives = 131/284 (46%)
Query: 165 LKRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW 224
L++ E+ +D + + V +++ T G ILVFL G EI + ++ S
Sbjct: 212 LQKPTENYVDSAI--ETVININSTYPPGDILVFLSGRKEIEYCIKKIEDSLIHASEDCQT 269
Query: 225 L--LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYN 282
L L LH+ + +Q +VF RKVI +TNIAETSITID +VYV D G +K+ YN
Sbjct: 270 LVPLPLHAGLTVDEQMRVFNIYDGDFRKVIFSTNIAETSITIDGIVYVVDSGFNKQRIYN 329
Query: 283 SQKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLV 342
+ S ++ IS G + LYT Y + ++ ++ +
Sbjct: 330 PYTRTSKLINVPISKSSAIQRSGRAGRTMRGKVFRLYTEKAYSLMKEEFEA-DILNCDMS 388
Query: 343 ELCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKL 401
L L +K L L I F + PP + A+ LY +G ++ LT PLG ++
Sbjct: 389 PLVLFLKGLGLKNILQF-PFFVRPPTVH-LMAALEDLYLLGVLDESGNLTDPLGIQISNS 446
Query: 402 PVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQN 445
+D I K +L FGC ILSI++ L+ F P +N
Sbjct: 447 FLDANISKALLTSNQFGCTHEILSIASILTAGEVFYNPTSSSKN 490
Score = 150 (57.9 bits), Expect = 9.6e-32, Sum P(3) = 9.6e-32
Identities = 43/91 (47%), Positives = 58/91 (63%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
VI+DEVHER+L D LL VLK +LEK++ D +++L SA+VD+N S++FG V T
Sbjct: 143 VILDEVHERTLSTDLLLGVLKRILEKRN--D---FRLVLSSASVDANKLSQFFGQDKVCT 197
Query: 78 A--EGRTHPVTTYFLEDVYESINYRLALDSA 106
EG+ PV T FL+ E NY +DSA
Sbjct: 198 MSIEGKLFPVETLFLQKPTE--NY---VDSA 223
Score = 38 (18.4 bits), Expect = 9.6e-32, Sum P(3) = 9.6e-32
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 491 GTKAAQQFCSKYFLSSSVMYMIRDMR 516
G K Q+C K +L+ + D+R
Sbjct: 518 GNKKDLQWCRKNYLNYQTLRQALDIR 543
Score = 37 (18.1 bits), Expect = 7.3e-06, Sum P(2) = 7.3e-06
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 317 SLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIK 357
+L R + + + +P QR+P + +K L G ++
Sbjct: 539 ALDIRTHLVRFLNKFSIPTAQRLPSSDCSKILKCLLDGFVR 579
>TIGR_CMR|CPS_2243 [details] [associations]
symbol:CPS_2243 "ATP-dependent helicase HrpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004386
"helicase activity" evidence=ISS] [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR001650 InterPro:IPR003593 InterPro:IPR007502
InterPro:IPR010222 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS51194 SMART:SM00382 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 HOGENOM:HOG000247272 KO:K03578 OMA:TYQFEPG
InterPro:IPR024590 Pfam:PF11898 TIGRFAMs:TIGR01967
RefSeq:YP_268968.1 ProteinModelPortal:Q482P9 STRING:Q482P9
GeneID:3518699 KEGG:cps:CPS_2243 PATRIC:21467591
BioCyc:CPSY167879:GI48-2313-MONOMER Uniprot:Q482P9
Length = 1375
Score = 300 (110.7 bits), Expect = 9.7e-32, Sum P(3) = 9.7e-32
Identities = 94/301 (31%), Positives = 143/301 (47%)
Query: 174 DYDLLEDLVCHVDET--CGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSS 231
+ D++ ++ VDE CG G ILVFL G EI D AA + ++ +L L++
Sbjct: 305 EVDIISGILSAVDELSDCGNGDILVFLNGEREIR---DTAAALVKANLRHTN-VLPLYAR 360
Query: 232 VASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMV 291
+ +Q ++F P R +++ATN+AETS+T+ + YV D G + +RY+ + K+ +
Sbjct: 361 LTVSEQNQIF--KPHSGRNIVLATNVAETSLTVPGIKYVIDPGTARISRYSYRTKVQRLP 418
Query: 292 EDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLL 351
+ +S V GIC LY+ Y K + PE+ R L + LQ+ L
Sbjct: 419 IEPVSQASANQRSGRCGRVSEGICIRLYSEDDY-KSRAEFTDPEILRTNLATVILQMHAL 477
Query: 352 SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE---------------ELTPLGH 396
LG I F +E P IT + +L E+ A+E E +LT G
Sbjct: 478 DLGDIANF--PFVEAPDNRNITDGVRLLEEIAAVESIENADKNAKGKASSTATQLTKSGR 535
Query: 397 HLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTD 456
LAK P+D + KM++ FGC+ IL I + LS + P P EKQ + K D
Sbjct: 536 LLAKFPIDPRLAKMVVSSIEFGCIEQILIIVSALSIQDPRERPH-EKQQLSDEKHNRFKD 594
Query: 457 K 457
K
Sbjct: 595 K 595
Score = 145 (56.1 bits), Expect = 9.7e-32, Sum P(3) = 9.7e-32
Identities = 40/104 (38%), Positives = 56/104 (53%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q D+ L +I+DE HERSL DF+L LK +L K+ P LK+I+ SAT+D
Sbjct: 204 MQRDRLLLKYDTIIIDEAHERSLNIDFILGYLKQILIKR-----PDLKLIITSATIDPQR 258
Query: 66 FSRYFGD-----CPVITAEGRTHPVTTYFLEDVYESINYRLALD 104
F+++F P+I GRT PV E Y +N R +D
Sbjct: 259 FAKHFSSKNGLPAPIIEVSGRTFPV-----EMRYRPLNDRAVID 297
Score = 40 (19.1 bits), Expect = 9.7e-32, Sum P(3) = 9.7e-32
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 608 YDGRR--EVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
Y G R + I P S ++ KS + +L+ E VET+++F R + P
Sbjct: 714 YKGARGMKFFIFPGSALTK-KSPK--WLMSAELVETSRLFARMNAKIDP 759
>SGD|S000005294 [details] [associations]
symbol:PRP2 "RNA-dependent ATPase in the DEAH-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=IDA] [GO:0071006 "U2-type catalytic step 1
spliceosome" evidence=IMP;IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0000349 "generation of catalytic spliceosome for
first transesterification step" evidence=IDA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 SGD:S000005294
GO:GO:0005524 GO:GO:0005634 EMBL:BK006947 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X77395
GO:GO:0000349 eggNOG:COG1643 GeneTree:ENSGT00700000104393
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026 HOGENOM:HOG000175261
OrthoDB:EOG4SBJ63 GO:GO:0008186 EMBL:X55936 EMBL:X55999 EMBL:Z71626
PIR:S12334 RefSeq:NP_014408.1 ProteinModelPortal:P20095 SMR:P20095
DIP:DIP-3961N IntAct:P20095 MINT:MINT-496813 STRING:P20095
PaxDb:P20095 EnsemblFungi:YNR011C GeneID:855745 KEGG:sce:YNR011C
CYGD:YNR011c KO:K12814 OMA:DDKIHIN NextBio:980148
Genevestigator:P20095 GermOnline:YNR011C Uniprot:P20095
Length = 876
Score = 243 (90.6 bits), Expect = 3.5e-31, Sum P(4) = 3.5e-31
Identities = 79/305 (25%), Positives = 136/305 (44%)
Query: 192 GAILVFLPGVAEIHILLDRLAASY-RFGGPSSDWLLA-LHSSVASVDQKKVFLRPPEKIR 249
G ILVFL G EI +L + G + ++ +++++ Q K+F PE R
Sbjct: 436 GDILVFLTGQEEIERTKTKLEEIMSKLGSRTKQMIITPIYANLPQEQQLKIFQPTPENCR 495
Query: 250 KVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXXXXXXX 309
KV++ATNIAETS+TID + YV D G KEN Y ++ ++ S
Sbjct: 496 KVVLATNIAETSLTIDGIRYVIDPGFVKENSYVPSTGMTQLLTVPCSRASVDQRAGRAGR 555
Query: 310 VKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKE 369
V PG C+ ++T+ Y + PE+ R L L LLSLG + ++ P
Sbjct: 556 VGPGKCFRIFTKWSYLHELELMPKPEITRTNLSNTVLL--LLSLGVTDLIKFPLMDKPSI 613
Query: 370 EAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIF----GCLSPILS 425
+ ++ LY +GA+ +T LG + + P + K++ G L L+
Sbjct: 614 PTLRKSLENLYILGALNSKGTITRLGKMMCEFPCEPEFAKVLYTAATHEQCQGVLEECLT 673
Query: 426 ISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQK 485
I + L +++P ++ ++ A ++L S +SDH++ + + +W+
Sbjct: 674 IVSML-HETPSLFIGQKRD----AAASVL------------SEVESDHILYLEIFNQWRN 716
Query: 486 ILLKR 490
R
Sbjct: 717 SKFSR 721
Score = 154 (59.3 bits), Expect = 3.5e-31, Sum P(4) = 3.5e-31
Identities = 29/81 (35%), Positives = 52/81 (64%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L+ + +++DE HER+L D L+ +LKD+L ++ P LK+++ SAT+++ FS
Sbjct: 334 DSKLSKYSCIMIDEAHERTLATDILIGLLKDILPQR-----PTLKLLISSATMNAKKFSE 388
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
+F +CP+ GR +PV ++
Sbjct: 389 FFDNCPIFNVPGRRYPVDIHY 409
Score = 67 (28.6 bits), Expect = 3.5e-31, Sum P(4) = 3.5e-31
Identities = 14/63 (22%), Positives = 31/63 (49%)
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S +SDH++ + + +W R +K ++ +C + + M +R++R Q +
Sbjct: 698 SEVESDHILYLEIFNQW------RNSKFSRSWCQDHKIQFKTMLRVRNIRNQLFRCSEKV 751
Query: 527 GLI 529
GL+
Sbjct: 752 GLV 754
Score = 53 (23.7 bits), Expect = 3.5e-31, Sum P(4) = 3.5e-31
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 610 GRREVHIHPSSI---NSQLKSFEHP--FLVFLEKVETNKVFLRDTTIV 652
G V +HP+SI N + K+ + P ++++ + + T+K F+RD ++
Sbjct: 803 GGLNVSVHPTSILFVNHKEKA-QRPSKYVLYQQLMLTSKEFIRDCLVI 849
>UNIPROTKB|F1MWZ4 [details] [associations]
symbol:F1MWZ4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045943 "positive regulation of transcription from RNA
polymerase I promoter" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000182
"rDNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
InterPro:IPR007502 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF04408 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00847 GO:GO:0005524 GO:GO:0005654 GO:GO:0005730
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 GO:GO:0000182 GO:GO:0045943
GeneTree:ENSGT00700000104241 OMA:APDYFRR EMBL:DAAA02048722
IPI:IPI00693412 Ensembl:ENSBTAT00000016932 Uniprot:F1MWZ4
Length = 714
Score = 332 (121.9 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 110/363 (30%), Positives = 157/363 (43%)
Query: 127 KNLVLSGWGDDSLLSEEYINXXXXXXXXXXXXEQTRQNLKRLNEDVIDYDLLEDLVCHVD 186
K LV+S D L S+ Y N K+ D + L+ H
Sbjct: 233 KVLVMSATMDVDLFSQ-YFNGAPVLYLEGRQHPIQIFYTKQPQHDYLHAALVSVFQIH-Q 290
Query: 187 ETCGEGAILVFLPGVAEIHILLD--RLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRP 244
E ILVFL G EI + R A + G S +L L++S+ Q +VF R
Sbjct: 291 EAPSSHDILVFLTGQEEIEAMSKTCRDIAKHLPDGCPSMLVLPLYASLPYAQQLRVFQRA 350
Query: 245 PEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISXXXXXXXX 304
P+ RKVII+TNIAETSITI + YV D G K +YN L + +S
Sbjct: 351 PKGYRKVIISTNIAETSITITGIKYVVDTGMVKAKKYNPDSGLEVLAVQRVSKTQAWQRT 410
Query: 305 XXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKAL 364
GICY LYT +EK + VPE+QR L + LQ+ + + + F +
Sbjct: 411 GRAGREDSGICYRLYTEDEFEKFEK-MTVPEIQRCNLASVMLQLLAMKIPNVLTF--DFM 467
Query: 365 EPPKEEAITTAISVLYEVGAIE---GDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLS 421
P + I AI+ L +GA+E G LTP+G +A P++ K +L F C
Sbjct: 468 SKPSPDHIQAAIAQLELLGALEHRDGQLTLTPMGRKMAAFPLEPKFAKTILLSPKFHCTE 527
Query: 422 PILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYK 481
IL+I A LS S P + V+ + + S++ DHL L+ Y+
Sbjct: 528 EILTIVALLSVDSILYNPPSRRDEVQSVRKKFV-------------SSEGDHLTLLNVYR 574
Query: 482 KWQ 484
++
Sbjct: 575 TFK 577
Score = 161 (61.7 bits), Expect = 2.5e-11, Sum P(3) = 2.5e-11
Identities = 38/98 (38%), Positives = 56/98 (57%)
Query: 18 VIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFGDCPVIT 77
+I+DE HER+L D L V+K +++ LKV++MSAT+D +LFS+YF PV+
Sbjct: 198 IILDEAHERTLHTDVLFGVVKAAQKRRKELGKLPLKVLVMSATMDVDLFSQYFNGAPVLY 257
Query: 78 AEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASS 115
EGR HP+ ++ + + AL S I EA S
Sbjct: 258 LEGRQHPIQIFYTKQPQHDYLHA-ALVSVFQIHQEAPS 294
Score = 66 (28.3 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 16/88 (18%), Positives = 44/88 (50%)
Query: 468 STQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIG 527
S++ DHL L+ Y+ + + T +++C + F++S M ++ ++R Q + +
Sbjct: 561 SSEGDHLTLLNVYRTF------KNTGGNKEWCKENFVNSKNMMLVAEVRAQLRDICIKMS 614
Query: 528 LINLPNKNQTGGKKKDDLDSWFSDESQM 555
+ + ++ T ++ S F+ +++
Sbjct: 615 MPIVSSRGDTESIRRCLAHSLFTSTAEL 642
Score = 57 (25.1 bits), Expect = 1.7e-30, Sum P(3) = 1.7e-30
Identities = 15/44 (34%), Positives = 24/44 (54%)
Query: 609 DGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
D + V IHPSS+ K +V+ E + T+K ++RD +V
Sbjct: 652 DTHQPVAIHPSSVLFHCKP---ACVVYTELLFTSKCYMRDLCVV 692
>UNIPROTKB|F5H3Y4 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00490 SMART:SM00847 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709
Pfam:PF07717 GO:GO:0008026 IPI:IPI00217630 HGNC:HGNC:17210
EMBL:AC093719 ProteinModelPortal:F5H3Y4 SMR:F5H3Y4
Ensembl:ENST00000544745 ArrayExpress:F5H3Y4 Bgee:F5H3Y4
Uniprot:F5H3Y4
Length = 962
Score = 264 (98.0 bits), Expect = 3.3e-30, Sum P(4) = 3.3e-30
Identities = 89/317 (28%), Positives = 140/317 (44%)
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
+L L+S +A Q +VF PPE R ++ATN+AETS+TI + YV DCG+ K+ Y+
Sbjct: 377 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 436
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+SS W+S +PG CY LY+ + + + PE+ R P+ +L
Sbjct: 437 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQ-FPPPEITRRPVEDL 495
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE-------------- 390
LQ+K L++ ++ F PP EA+ A +L +GA++ ++
Sbjct: 496 ILQMKALNVEKVINFPFPT--PPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 553
Query: 391 -LTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIY---P--KDEKQ 444
+T LG +A PV KM+ GCL ++I A ++ + F P DE+
Sbjct: 554 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAASDEEL 613
Query: 445 NVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFL 504
++K A + + S D +VL+ A + QFC L
Sbjct: 614 TRLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEY------ASCTPQFCEANGL 667
Query: 505 SSSVMYMIRDMRIQFGT 521
M IR +R Q T
Sbjct: 668 RYKAMMEIRRLRGQLTT 684
Score = 115 (45.5 bits), Expect = 3.3e-30, Sum P(4) = 3.3e-30
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q D L VI+DE HERS+ D L+ +L ++ ++ + P LK+++MSAT+
Sbjct: 144 IQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLP-LKLLIMSATLRVED 202
Query: 66 FS---RYFGDCP-VITAEGRTHPVTTYF 89
F+ R F P VI E R PVT +F
Sbjct: 203 FTQNPRLFAKPPPVIKVESRQFPVTVHF 230
Score = 71 (30.1 bits), Expect = 3.3e-30, Sum P(4) = 3.3e-30
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 182 VCHVDETCGEGAILVFLPGVAEIHILLDRLAASY 215
VC + G ILVFL G AE+H L RL ++
Sbjct: 247 VCKIHRMLPAGGILVFLTGQAEVHALCRRLRKAF 280
Score = 58 (25.5 bits), Expect = 3.3e-30, Sum P(4) = 3.3e-30
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
V IHPSS+ K F+V+ E VET K++++ + V
Sbjct: 751 VFIHPSSV--LFKELPE-FVVYQEIVETTKMYMKGVSSV 786
Score = 37 (18.1 bits), Expect = 3.5e-06, Sum P(4) = 3.5e-06
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 357 KIFLSKALEPPKEEAIT 373
++F+ ++PP E +T
Sbjct: 694 ELFVDPKMQPPTESQVT 710
>UNIPROTKB|Q8IY37 [details] [associations]
symbol:DHX37 "Probable ATP-dependent RNA helicase DHX37"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
eggNOG:COG1643 InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
HOGENOM:HOG000201240 KO:K14780 EMBL:BC002575 EMBL:BC037964
EMBL:AB040950 IPI:IPI00217630 RefSeq:NP_116045.2 UniGene:Hs.107382
ProteinModelPortal:Q8IY37 SMR:Q8IY37 IntAct:Q8IY37 STRING:Q8IY37
PhosphoSite:Q8IY37 DMDM:38257651 PaxDb:Q8IY37 PRIDE:Q8IY37
Ensembl:ENST00000308736 GeneID:57647 KEGG:hsa:57647 UCSC:uc001ugy.3
CTD:57647 GeneCards:GC12M125431 HGNC:HGNC:17210 HPA:HPA047607
neXtProt:NX_Q8IY37 PharmGKB:PA27224 HOVERGEN:HBG051356
InParanoid:Q8IY37 OMA:AKLQPRT OrthoDB:EOG4P2Q1J PhylomeDB:Q8IY37
GenomeRNAi:57647 NextBio:64382 ArrayExpress:Q8IY37 Bgee:Q8IY37
CleanEx:HS_DHX37 Genevestigator:Q8IY37 GermOnline:ENSG00000150990
Uniprot:Q8IY37
Length = 1157
Score = 264 (98.0 bits), Expect = 9.6e-30, Sum P(4) = 9.6e-30
Identities = 89/317 (28%), Positives = 140/317 (44%)
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
+L L+S +A Q +VF PPE R ++ATN+AETS+TI + YV DCG+ K+ Y+
Sbjct: 590 VLPLYSLLAPEKQAQVFKPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRYYDRV 649
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+SS W+S +PG CY LY+ + + + PE+ R P+ +L
Sbjct: 650 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFGDFEQ-FPPPEITRRPVEDL 708
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE-------------- 390
LQ+K L++ ++ F PP EA+ A +L +GA++ ++
Sbjct: 709 ILQMKALNVEKVINFPFPT--PPSVEALLAAEELLIALGALQPPQKAERVKQLQENRLSC 766
Query: 391 -LTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIY---P--KDEKQ 444
+T LG +A PV KM+ GCL ++I A ++ + F P DE+
Sbjct: 767 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVASMTVRELFEELDRPAASDEEL 826
Query: 445 NVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFL 504
++K A + + S D +VL+ A + QFC L
Sbjct: 827 TRLKSKRARVAQMKRTWAGQGASLKLGDLMVLLGAVGACEY------ASCTPQFCEANGL 880
Query: 505 SSSVMYMIRDMRIQFGT 521
M IR +R Q T
Sbjct: 881 RYKAMMEIRRLRGQLTT 897
Score = 115 (45.5 bits), Expect = 9.6e-30, Sum P(4) = 9.6e-30
Identities = 33/88 (37%), Positives = 49/88 (55%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q D L VI+DE HERS+ D L+ +L ++ ++ + P LK+++MSAT+
Sbjct: 357 IQKDFLLLRYKVVIIDEAHERSVYTDILIGLLSRIVTLRAKRNLP-LKLLIMSATLRVED 415
Query: 66 FS---RYFGDCP-VITAEGRTHPVTTYF 89
F+ R F P VI E R PVT +F
Sbjct: 416 FTQNPRLFAKPPPVIKVESRQFPVTVHF 443
Score = 71 (30.1 bits), Expect = 9.6e-30, Sum P(4) = 9.6e-30
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 182 VCHVDETCGEGAILVFLPGVAEIHILLDRLAASY 215
VC + G ILVFL G AE+H L RL ++
Sbjct: 460 VCKIHRMLPAGGILVFLTGQAEVHALCRRLRKAF 493
Score = 58 (25.5 bits), Expect = 9.6e-30, Sum P(4) = 9.6e-30
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
V IHPSS+ K F+V+ E VET K++++ + V
Sbjct: 964 VFIHPSSV--LFKELPE-FVVYQEIVETTKMYMKGVSSV 999
Score = 37 (18.1 bits), Expect = 7.8e-06, Sum P(4) = 7.8e-06
Identities = 5/17 (29%), Positives = 11/17 (64%)
Query: 357 KIFLSKALEPPKEEAIT 373
++F+ ++PP E +T
Sbjct: 907 ELFVDPKMQPPTESQVT 923
>UNIPROTKB|E1C9C2 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 OMA:AKLQPRT EMBL:AADN02034854
IPI:IPI00601367 Ensembl:ENSGALT00000004688 Uniprot:E1C9C2
Length = 1145
Score = 252 (93.8 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 86/323 (26%), Positives = 146/323 (45%)
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
++L L+S +A Q KVF PP R ++ATN+AETS+TI + YV DCG+ K+ Y+
Sbjct: 578 YVLPLYSLLAPEKQAKVFRPPPPGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRFYDK 637
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+SS WIS +PG CY LY+ + + + PE+ + P+ +
Sbjct: 638 ITGVSSFRVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFMDFEK-FSAPEITKRPVED 696
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIE-----G---DEE----- 390
L LQ+K L++ ++ F PP EA+ A +L +GA++ G +++
Sbjct: 697 LILQMKALNIEKVINFPFPT--PPPTEALAAAEELLIALGALKEPPMTGRLKEQQAAKLS 754
Query: 391 --LTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFI-YPKDEKQNVE 447
++PLG +A PV KM+ CL ++I + ++ + F + + E
Sbjct: 755 CPISPLGRVMATFPVAPRYAKMLALSRQHDCLPYTITIVSAMTVRELFEEFDRPAASEEE 814
Query: 448 RAKLALLTDKLEGLSD--SNDSSTQS--DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYF 503
KL +L + + S Q D +V++ A + + +FC +
Sbjct: 815 TVKLKGKKGRLVQMQRIWAGQGSLQKLGDLMVMLGAVGACEY------SGCTPKFCEENG 868
Query: 504 LSSSVMYMIRDMRIQFGTLLADI 526
L M IR +R Q T + +
Sbjct: 869 LRYKAMLEIRRLRGQLTTAVNSV 891
Score = 115 (45.5 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 32/88 (36%), Positives = 49/88 (55%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q D L+ +I+DE HERS+ D L+ +L ++ + P LK+I+MSAT+
Sbjct: 347 VQKDFLLSKYKVIIIDEAHERSMYTDILIGLLSRIVPLREKKGLP-LKLIIMSATLRVED 405
Query: 66 FS---RYF-GDCPVITAEGRTHPVTTYF 89
F+ R F G PV+ + R PVT +F
Sbjct: 406 FTENTRLFAGTPPVLQVDARQFPVTVHF 433
Score = 75 (31.5 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 16/36 (44%), Positives = 20/36 (55%)
Query: 182 VCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRF 217
VC + G ILVFL G AE+H L RL ++ F
Sbjct: 450 VCKIHRMLPSGGILVFLTGQAEVHSLCRRLRKAFPF 485
Score = 66 (28.3 bits), Expect = 1.2e-29, Sum P(4) = 1.2e-29
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
V IHPSS+ K F+V+ E VET K++++ + V P
Sbjct: 953 VFIHPSSV--LFKQLPE-FVVYQEIVETTKLYMKGVSAVEP 990
>ASPGD|ASPL0000001852 [details] [associations]
symbol:AN6085 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 Pfam:PF00271 Pfam:PF04408
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00847
GO:GO:0005524 GO:GO:0003676 EMBL:BN001301 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR011709 Pfam:PF07717
GO:GO:0008026 OMA:PGQEEID EnsemblFungi:CADANIAT00006930
Uniprot:C8V2M2
Length = 824
Score = 313 (115.2 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 90/287 (31%), Positives = 141/287 (49%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFG-GPSSDWL--LA 227
D +D L H E G ILVFL G + L + L Y G PS + L
Sbjct: 383 DFVDAALKVIFQIHYKEPI-PGDILVFLTGQETVEAL-ENLVNEYATGMDPSLPKIQVLP 440
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
L +++ Q++VF+ P + RK+I+ATNIAETS+T+ V YV DCG+ K ++ ++ L
Sbjct: 441 LFAALPQAAQQRVFVPAPPRTRKIILATNIAETSVTVSGVRYVVDCGKAKIKQFRTRLGL 500
Query: 288 SSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S++ IS PG CY LYT Y L PE+ R L + L
Sbjct: 501 DSLLVKPISKSAAIQRKGRAGREAPGQCYRLYTEKDYLALDE-VNTPEILRCDLSQAILN 559
Query: 348 IKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLI 407
+K + + F L P EA+ A+ L + A++ +++ G H+AKLP+ +
Sbjct: 560 MKARGVDNVIEF--PFLTRPPREALEKALLQLLSIEALDETGKISETGSHIAKLPLTPTL 617
Query: 408 GKMMLFGGIFG--CLSPILSISAFLSYKSPFIYPKDEKQNVERAKLA 452
G+++L FG CL+ ++ I + LS ++ F+ E++ E A+ A
Sbjct: 618 GRVLLAASDFGPDCLTDVIDIISCLSVENIFLNTTSEEKK-EAAEAA 663
Score = 94 (38.1 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLE-KQSAHDTPKLKVILMSATVDSNLFS 67
D LT + ++VDEVHER + D ++ L++L+ K+ LK ++MSAT D
Sbjct: 278 DPWLTKYSAIVVDEVHERGVNVDLVMGFLRNLVSGKREGRGGVPLKAVVMSATADMESLQ 337
Query: 68 RYF 70
+F
Sbjct: 338 EFF 340
Score = 45 (20.9 bits), Expect = 1.6e-29, Sum P(3) = 1.6e-29
Identities = 15/43 (34%), Positives = 23/43 (53%)
Query: 610 GRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
G + V IHPSS+ K E +++ E V TN+ + R + V
Sbjct: 773 GNQTVAIHPSSVLFG-KKVEA--ILYNEFVFTNRSYARGVSAV 812
>UNIPROTKB|E2RHZ3 [details] [associations]
symbol:DHX37 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR003593 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS51194
SMART:SM00382 SMART:SM00490 SMART:SM00847 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR011709 Pfam:PF07717 GO:GO:0008026
GeneTree:ENSGT00550000074985 KO:K14780 CTD:57647 OMA:AKLQPRT
EMBL:AAEX03014623 RefSeq:XP_534640.2 Ensembl:ENSCAFT00000011159
GeneID:477442 KEGG:cfa:477442 NextBio:20852918 Uniprot:E2RHZ3
Length = 1149
Score = 267 (99.0 bits), Expect = 1.8e-29, Sum P(4) = 1.8e-29
Identities = 72/248 (29%), Positives = 120/248 (48%)
Query: 225 LLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQ 284
+L L+S +A Q +VF PPE R ++ATN+AETS+TI + YV DCG+ K+ Y+
Sbjct: 584 VLPLYSLLAPEKQAQVFQPPPEGTRLCVVATNVAETSLTIPGIKYVVDCGKVKKRHYDRV 643
Query: 285 KKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVEL 344
+SS W+S +PG CY LY+ + + + PE+ R P+ +L
Sbjct: 644 TGVSSFRVTWVSQASADQRAGRAGRTEPGHCYRLYSSAVFSDFEQ-FPPPEITRRPVEDL 702
Query: 345 CLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEE-------------- 390
LQ+K L++ ++ F PP EA+ A +L +GA++ ++
Sbjct: 703 ILQMKALNIEKVINFPFPT--PPSVEALIAAEELLIALGALQAPQKTESVKQLQRSWLGC 760
Query: 391 -LTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERA 449
+T LG +A PV KM+ GCL ++I A ++ + ++ + ++
Sbjct: 761 PITALGRTMATFPVAPRYAKMLALSRQHGCLPYAITIVAAMTVRE--LFEELDRPAASDE 818
Query: 450 KLALLTDK 457
+L L DK
Sbjct: 819 ELGQLKDK 826
Score = 111 (44.1 bits), Expect = 1.8e-29, Sum P(4) = 1.8e-29
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q D L V++DE HERS+ D L+ +L ++ ++ P LK+++MSAT+
Sbjct: 351 IQKDFLLLRYKVVLIDEAHERSVYTDILIGLLSRIVSLRAKRHLP-LKLLIMSATLRVED 409
Query: 66 FS---RYFGDCP-VITAEGRTHPVTTYF 89
F+ R F P VI E R PVT +F
Sbjct: 410 FTQNQRLFPQPPPVIKVESRQFPVTVHF 437
Score = 71 (30.1 bits), Expect = 1.8e-29, Sum P(4) = 1.8e-29
Identities = 15/34 (44%), Positives = 19/34 (55%)
Query: 182 VCHVDETCGEGAILVFLPGVAEIHILLDRLAASY 215
VC + G ILVFL G AE+H L RL ++
Sbjct: 454 VCKIHRMLPAGGILVFLTGQAEVHALCRRLRRAF 487
Score = 56 (24.8 bits), Expect = 1.8e-29, Sum P(4) = 1.8e-29
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 614 VHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
V IHPSS+ K F+V+ E +ET K++++ + V
Sbjct: 958 VFIHPSSV--LFKELPE-FVVYQEIMETTKMYMKGVSAV 993
Score = 38 (18.4 bits), Expect = 2.4e-05, Sum P(4) = 2.4e-05
Identities = 5/16 (31%), Positives = 10/16 (62%)
Query: 358 IFLSKALEPPKEEAIT 373
+F+ ++PP E +T
Sbjct: 902 LFMDPKMQPPSESQVT 917
>POMBASE|SPAPB1A10.06c [details] [associations]
symbol:SPAPB1A10.06c "ATP-dependent RNA helicase Dhr1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISM] [GO:0005524 "ATP binding" evidence=ISM] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0030490 "maturation of SSU-rRNA" evidence=ISO] [GO:0032040
"small-subunit processome" evidence=ISO] InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR007502 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF04408 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00847 PomBase:SPAPB1A10.06c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG1643
InterPro:IPR011709 Pfam:PF07717 GO:GO:0004004 GO:GO:0032040
GO:GO:0030490 HOGENOM:HOG000201240 KO:K14780 OMA:HQLKREE
OrthoDB:EOG4KM2B8 EMBL:AB027915 RefSeq:NP_593520.1
ProteinModelPortal:Q9HDY4 STRING:Q9HDY4
EnsemblFungi:SPAPB1A10.06c.1 GeneID:2543371 KEGG:spo:SPAPB1A10.06c
NextBio:20804386 Uniprot:Q9HDY4
Length = 1183
Score = 306 (112.8 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 68/214 (31%), Positives = 110/214 (51%)
Query: 224 WLLALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
++L L+S + + DQ KVF PE R I+ATN+AETSITI ++ YV DCG+ KE YN
Sbjct: 703 YVLPLYSLLTTEDQMKVFDSSPEGHRMCIVATNVAETSITIPNIRYVVDCGKAKERVYNE 762
Query: 284 QKKLSSMVEDWISXXXXXXXXXXXXXVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + WIS PG CY LY+ ++ + +PE+ R P+
Sbjct: 763 KTSVQKFEVRWISKANADQRAGRAGRTGPGHCYRLYSSAVFDSSFPLHSLPEILRTPVES 822
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
+ LQ+K +++ I F P + ++ +L +GAI+ + LT LG ++ P+
Sbjct: 823 IVLQMKNMNIDNIANFPFPT--SPGRSRLEKSLKLLSNLGAIDSEGVLTKLGEQMSLFPL 880
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFI 437
KM++ G GCL ++++ + LS F+
Sbjct: 881 SPRFSKMLIIGQQHGCLPYVIALVSALSINQLFV 914
Score = 108 (43.1 bits), Expect = 1.9e-29, Sum P(2) = 1.9e-29
Identities = 34/93 (36%), Positives = 50/93 (53%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDL--LEKQSAHDTPK---LKVILMSAT 60
L D LT + VIVDE HERS+ D LL +L + L ++ + K LK+I+MSAT
Sbjct: 507 LSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSAT 566
Query: 61 VDSNLFSR----YFGDCPVITAEGRTHPVTTYF 89
+ FS + P+I + R +PV+ +F
Sbjct: 567 LRVTDFSENKLLFSVPPPIIKIDARQYPVSIHF 599
WARNING: HSPs involving 62 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 735 710 0.00083 121 3 11 22 0.39 34
36 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 312
No. of states in DFA: 622 (66 KB)
Total size of DFA: 355 KB (2178 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 57.63u 0.10s 57.73t Elapsed: 00:00:02
Total cpu time: 57.71u 0.10s 57.81t Elapsed: 00:00:02
Start: Tue May 21 01:21:29 2013 End: Tue May 21 01:21:31 2013
WARNINGS ISSUED: 2