BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 047202
(735 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1
Length = 1362
Score = 499 bits (1284), Expect = e-140, Method: Compositional matrix adjust.
Identities = 295/737 (40%), Positives = 435/737 (59%), Gaps = 65/737 (8%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D L ++H+IVDEVHER++ DFLLI+L+++L K+S L ++LMSATVD
Sbjct: 681 LQEDSMLKNISHIIVDEVHERTVQSDFLLIILREILHKRS-----DLHLVLMSATVDCEK 735
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CP+I GRT PV + LEDV E+ + L DS ++ +
Sbjct: 736 FSSYFTHCPIIRISGRTFPVEVFHLEDVVEATGFVLEQDSEYCQKFLEDEE--------- 786
Query: 126 KKNLVLSGWGDDSLLSEEYINPYYDP-----SDYGSYSEQTRQNLKRLNEDVIDYDLLED 180
+ L ++G G S +E+I + Y YS QTR + +N + I+ DL+ +
Sbjct: 787 EITLSVTGKGGSSKKYQEFIPAQSGTGLDLGARYQRYSSQTRHAVLYMNPNKINLDLILE 846
Query: 181 LVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVD 236
L+ +D + EGA+L+FLPG+A+I L D L++ RF L+ALHS ++S D
Sbjct: 847 LLVFLDISPEYRNVEGAVLIFLPGLADIQQLYDILSSDKRFHDRRRYKLIALHSILSSQD 906
Query: 237 QKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWIS 296
Q + F+ PP RK+++ATNIAET ITI DVV+V D GR KENRY+ ++SS+VE +IS
Sbjct: 907 QAEAFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRYHESSQMSSLVETFIS 966
Query: 297 QANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRI 356
+A+A QR+GRAGRV+ G C+ LYTR R+E M Y VPE+ R+PL ELCL I LG
Sbjct: 967 KASALQRQGRAGRVRNGYCFRLYTRERFESFME-YSVPEILRVPLEELCLHIMKCDLGSP 1025
Query: 357 KIFLSKALEPPKEEAITTAISVLYEVGAIE-GDEELTPLGHHLAKLPVDVLIGKMMLFGG 415
+ FLSKAL+PP+ + I+ A+S+L ++GA E +LTPLG HLA LPV+V IGKM++FG
Sbjct: 1026 EDFLSKALDPPQLQVISNAMSLLRKIGACELSQPKLTPLGQHLAALPVNVKIGKMLIFGA 1085
Query: 416 IFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLV 475
IFGCL + +++A ++ KSPF+ P EK +RA LA S+ + SDH+
Sbjct: 1086 IFGCLDAVATLAATMTEKSPFVTPIGEK---DRADLA----------KSSMAVANSDHVT 1132
Query: 476 LMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKN 535
+ AY W K + G A +C K FL+ + I D++ + L+ G P
Sbjct: 1133 IFRAYLGW-KAIRPEGYAAEMSYCRKNFLNRKALLTIEDVKQELIRLVRAAGF-ECPRSV 1190
Query: 536 QTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRK 595
+ G S M + A +S++KAIL AGLY NV G L K
Sbjct: 1191 EANGLS-----------SAMKALSAEETSLLKAILTAGLYDNV--------GKIL--FTK 1229
Query: 596 SSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPF 655
S + K + + + +HPSS+N L+ + +L++ EKV+ +KVFLR+TT++SPF
Sbjct: 1230 SVDITEKLACIVETAQGKAQVHPSSVNRDLQIYG--WLLYQEKVKYSKVFLRETTLISPF 1287
Query: 656 SILLFGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNSTIA 715
+LLFGG I VQH+ +T+D W+ AP + AV+FKELR+ + S+L+Q + NP+ S
Sbjct: 1288 PVLLFGGDIAVQHRERLLTVDDWIHFQAPVKIAVIFKELRILIESVLKQKLENPKMSL-- 1345
Query: 716 NNEVVKSMIQLLLEEDK 732
++++ ++I+ L++ ++
Sbjct: 1346 KDDMILNIIKELIKTER 1362
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 496 bits (1278), Expect = e-139, Method: Compositional matrix adjust.
Identities = 289/732 (39%), Positives = 432/732 (59%), Gaps = 50/732 (6%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD L GV+H+IVDEVHER+ DFLL+VLKD++ ++ P L+VILMSAT+++ L
Sbjct: 653 LEGDTALQGVSHIIVDEVHERTEESDFLLLVLKDIVSQR-----PGLQVILMSATLNAEL 707
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF CPVIT GRT PV +FLED Y L D + +R + RR
Sbjct: 708 FSDYFNSCPVITIPGRTFPVDQFFLEDAIAVTRYVLQ-DGSPYMRSMKQISKEKLKARRN 766
Query: 126 KK---------NLVLSGWGDDSL---LSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVI 173
+ L L DS+ + ++ ++ + Y S+ + + ++ + +
Sbjct: 767 RTAFEEVEEDLRLSLHLQDQDSVKDAVPDQQLDFKQLLARYKGVSKSVIKTMSIMDFEKV 826
Query: 174 DYDLLEDL---VCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLL--AL 228
+ +L+E L + + GAILVFLPG+AEI +L ++L ++ F S+ + L
Sbjct: 827 NLELIEALLEWIVDGKHSYPPGAILVFLPGLAEIKMLYEQLQSNSLFNNRRSNRCVIHPL 886
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
HSS++S +Q+ VF++PP + K+II+TNIAETSITIDDVVYV D G+ KE RY++ K +
Sbjct: 887 HSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGME 946
Query: 289 SMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ + ++SQANA QR+GRAGRV G+C+ L+T H Y + Q+PE+QR+PL +LCL+I
Sbjct: 947 SLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRI 1006
Query: 349 KLL---SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDV 405
K+L S ++ S+ +EPP +++ + L ++GA+ DE LTPLG+HLA LPVDV
Sbjct: 1007 KILEMFSAHNLQSVFSRLIEPPHTDSLRASKIRLRDLGALTPDERLTPLGYHLASLPVDV 1066
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSN 465
IGK+MLFG IF CL P L+I+A L++KSPF+ P D+K+ + KL
Sbjct: 1067 RIGKLMLFGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEF------------ 1114
Query: 466 DSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLAD 525
+ SD+L L+ AYK WQ + K G +A+ +C + FLS V+ + ++ QF LL+D
Sbjct: 1115 -AFANSDYLALLQAYKGWQ-LSTKEGVRASYNYCRQNFLSGRVLQEMASLKRQFTELLSD 1172
Query: 526 IGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVA---ATE 582
IG + + K+ D + N A + ++ A+LCA LYPNV + E
Sbjct: 1173 IGFAREGLRAREIEKRAQGGDGVLDATGEEANSNAENPKLISAMLCAALYPNVVQVKSPE 1232
Query: 583 QGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
+ +R SA DG VHIHPSS+N Q++ F+ P+L++ EK++T+
Sbjct: 1233 GKFQKTSTGAVRMQPKSAELKFVTKNDGY--VHIHPSSVNYQVRHFDSPYLLYHEKIKTS 1290
Query: 643 KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTI---DGWLK-VTAPAQTAVLFKELRLT 697
+VF+RD ++VS + ++LF GG +NVQ Q G+ + DGW++ V A Q A L KELR
Sbjct: 1291 RVFIRDCSMVSVYPLVLFGGGQVNVQLQRGEFVVSLDDGWIRFVAASHQVAELVKELRCE 1350
Query: 698 LHSILRQMIRNP 709
L +L+ I+NP
Sbjct: 1351 LDQLLQDKIKNP 1362
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 284/740 (38%), Positives = 444/740 (60%), Gaps = 75/740 (10%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D L V+HVIVDEVHERS+ DFLL++LK++L+K+S L +ILMSATVDS+
Sbjct: 686 LQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKRS-----DLHLILMSATVDSDK 740
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRY---------EASSK 116
FS YF CP++ GR++PV + LED+ E + L DS ++ +SK
Sbjct: 741 FSTYFTHCPILRISGRSYPVEVFHLEDIVEETGFVLEKDSEYCQKFLEEEEEITINVTSK 800
Query: 117 SGPVNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYD 176
+G V + + V SG + +NP+Y YS +T+ + +N I+ D
Sbjct: 801 AGGVKKYQ-EYIPVQSGASPE-------LNPFYQ-----KYSSRTQHAILYMNPHKINLD 847
Query: 177 LLEDLVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSV 232
L+ +L+ ++D++ EGA+L+FLPG+A I L D L++ RF ++ALHS +
Sbjct: 848 LILELLVYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSSDRRFYSERYQ-VIALHSVL 906
Query: 233 ASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVE 292
++ DQ F+ PP +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE
Sbjct: 907 STQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVE 966
Query: 293 DWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLS 352
++S+A+A QR+GRAGRV+ G C+ LYTR R+E + Y VPE+ R+PL ELCL I
Sbjct: 967 TFVSKASALQRQGRAGRVRDGFCFRLYTRERFEGFLD-YSVPEILRVPLEELCLHIMKCD 1025
Query: 353 LGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMM 411
LG + FLSKAL+PP+ + I+ A+++L ++GA E +E +LTPLG HLA LPV+V IGKM+
Sbjct: 1026 LGSPEDFLSKALDPPQLQVISNAMNLLRKIGACEPNEPKLTPLGQHLAALPVNVKIGKML 1085
Query: 412 LFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQS 471
+FG IFGCL P+ +++A ++ KSPFI P K + AK +L + S
Sbjct: 1086 IFGAIFGCLEPVATLAAVMTEKSPFITPIGRKDEADLAKSSL-------------AVADS 1132
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINL 531
DHL + AY W+K + G ++ +C + FL+ + + + D++ + L+ G +
Sbjct: 1133 DHLTIYNAYLGWKKAQQEGGFRSEISYCQRNFLNRTSLLTLEDVKQELMKLVKAAGFSSS 1192
Query: 532 PNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALS 591
P + G K L F D +++KA+L AGLY +V G +
Sbjct: 1193 P--SWEGRKGPQTLS--FQD-----------IALLKAVLAAGLYDSV--------GKIMC 1229
Query: 592 NLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTI 651
KS + K + + + +HPSS+N L+++ +L++ EKV +V+LR+TT+
Sbjct: 1230 T--KSVDVTEKLACMVETAQGKAQVHPSSVNRDLQTY--GWLLYQEKVRYTRVYLRETTL 1285
Query: 652 VSPFSILLFGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQN 711
++PF +LLFGG I VQH+ +++DGW+ AP + AV+FK+LR+ + S+LR+ + NP+
Sbjct: 1286 ITPFPVLLFGGDIEVQHRERLLSVDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPKM 1345
Query: 712 STIANNEVVKSMIQLLLEED 731
S + N+++++ + +L+ E+
Sbjct: 1346 S-LENDKILQIITELIKTEN 1364
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 488 bits (1256), Expect = e-137, Method: Compositional matrix adjust.
Identities = 281/740 (37%), Positives = 438/740 (59%), Gaps = 72/740 (9%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ D L+ V+HVIVDEVHERS+ DFLLI+LK++L+K+S L +ILMSATVDS
Sbjct: 687 LQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKRS-----DLHLILMSATVDSEK 741
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRY---------EASSK 116
FS YF CP++ GR++PV + LED+ E + L DS ++ +SK
Sbjct: 742 FSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYCQKFLEEEEEVTINVTSK 801
Query: 117 SGPVNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYD 176
+G + + + D +NP+Y YS +T+ + +N I+ D
Sbjct: 802 AGGIKKYQEYIPVQTGAHAD--------LNPFYQ-----KYSSRTQHAILYMNPHKINLD 848
Query: 177 LLEDLVCHVDETCG----EGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSV 232
L+ +L+ ++D++ EGA+L+FLPG+A I L D L+ RF ++ALHS +
Sbjct: 849 LILELLAYLDKSPQFRNIEGAVLIFLPGLAHIQQLYDLLSNDRRFYSERYK-VIALHSIL 907
Query: 233 ASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVE 292
++ DQ F PP +RK+++ATNIAET ITI DVV+V D GR KEN+Y+ ++SS+VE
Sbjct: 908 STQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSSLVE 967
Query: 293 DWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLS 352
++S+A+A QR+GRAGRV+ G C+ +YTR R+E M Y VPE+ R+PL ELCL I +
Sbjct: 968 TFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFM-DYSVPEILRVPLEELCLHIMKCN 1026
Query: 353 LGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDE-ELTPLGHHLAKLPVDVLIGKMM 411
LG + FLSKAL+PP+ + I+ A+++L ++GA E +E +LTPLG HLA LPV+V IGKM+
Sbjct: 1027 LGSPEDFLSKALDPPQLQVISNAMNLLRKIGACELNEPKLTPLGQHLAALPVNVKIGKML 1086
Query: 412 LFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQS 471
+FG IFGCL P+ +++A ++ KSPF P K + AK AL ++D S
Sbjct: 1087 IFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSAL------AMAD-------S 1133
Query: 472 DHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINL 531
DHL + AY W+K + G ++ +C + FL+ + + + D++ + L+ G +
Sbjct: 1134 DHLTIYNAYLGWKKARQEGGYRSEITYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSS 1193
Query: 532 PNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALS 591
G + S+ +++KA+L AGLY NV G +
Sbjct: 1194 TTSTSWEGNRASQTLSF------------QEIALLKAVLVAGLYDNV--------GKIIY 1233
Query: 592 NLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTI 651
KS + K + + + +HPSS+N L++ H +L++ EK+ +V+LR+TT+
Sbjct: 1234 T--KSVDVTEKLACIVETAQGKAQVHPSSVNRDLQT--HGWLLYQEKIRYARVYLRETTL 1289
Query: 652 VSPFSILLFGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQN 711
++PF +LLFGG I VQH+ ++IDGW+ AP + AV+FK+LR+ + S+LR+ + NP+
Sbjct: 1290 ITPFPVLLFGGDIEVQHRERLLSIDGWIYFQAPVKIAVIFKQLRVLIDSVLRKKLENPKM 1349
Query: 712 STIANNEVVKSMIQLLLEED 731
S + N+++++ + +L+ E+
Sbjct: 1350 S-LENDKILQIITELIKTEN 1368
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 287/732 (39%), Positives = 429/732 (58%), Gaps = 49/732 (6%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+GD L GVTH+IVDEVHER+ DFLL+VLKD++ +++ L+VILMSAT+D+ L
Sbjct: 654 LEGDATLQGVTHIIVDEVHERTEESDFLLLVLKDIVMQRAT-----LQVILMSATLDAGL 708
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSA--AAIRYEASSKSGPVNNR 123
FS+YF CPVIT GR PV +FLED Y L S +++ A K +NR
Sbjct: 709 FSKYFSYCPVITIPGRAFPVDQFFLEDALAVTRYVLQDGSPYMRSMKQIAKEKLKARHNR 768
Query: 124 RGKKN------LVLSGWGDDSLLSEEYINPYYDPSD----YGSYSEQTRQNLKRLNEDVI 173
++ L L ++ + + + D Y S+ + + ++ + +
Sbjct: 769 TAQEEVEEDLRLSLHLQDEEESVKDTIPDQQLDFKQLLIRYKGVSKSVIKTMSVMDFEKV 828
Query: 174 DYDLLEDL---VCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLL--AL 228
+ +L+E L + GA+LVFLPG+AEI +L ++L ++ F S + L
Sbjct: 829 NLELIEALLEWIVDGKHAYPPGAVLVFLPGLAEIKMLYEQLQSNSLFNNRRSHRCVIHPL 888
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
HSS++S +Q+ VF++PP + K+II+TNIAETSITIDDVVYV D G+ KE RY++ K +
Sbjct: 889 HSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGME 948
Query: 289 SMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
S+ + ++SQANA QR+GRAGRV G+C+ L+T H Y + Q+PE+QR+PL +LCL+I
Sbjct: 949 SLEDTFVSQANALQRKGRAGRVASGVCFHLFTSHHYNHQLLKQQLPEIQRVPLEQLCLRI 1008
Query: 349 KLL---SLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDV 405
K+L S ++ S+ +EPP +++ + L ++GA+ DE+LTPLG+HLA LPVDV
Sbjct: 1009 KILEMFSTHNLQSVFSRLIEPPHIDSLRASKVRLRDLGALTPDEKLTPLGYHLASLPVDV 1068
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSN 465
IGK+ML G IF CL P L+I+A L++KSPF+ P D+K+ + KL
Sbjct: 1069 RIGKLMLLGSIFRCLDPALTIAASLAFKSPFVSPWDKKEEANQKKLEF------------ 1116
Query: 466 DSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLAD 525
+ SD+L L+ AYK WQ + K +A+ +C + FLS + + ++ QF LL+D
Sbjct: 1117 -AFANSDYLALLCAYKGWQ-LSTKESARASYNYCRQNFLSGRTLQEMASLKRQFTELLSD 1174
Query: 526 IGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNV--AATEQ 583
IG + + + K+ D + N A + ++ A+LCA LYPNV T +
Sbjct: 1175 IGFVKEGLRAKEIEKRAQGGDGVLDATGEEANTNAENPKLISAVLCAALYPNVVQVKTPE 1234
Query: 584 GVAGAALSN-LRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
G S +R SA DG VHIHPSS+N Q++ F+ P+L++ EK++T+
Sbjct: 1235 GKFQKTSSGVVRLQPKSAELKFVTKNDGY--VHIHPSSVNYQVRHFDSPYLLYHEKIKTS 1292
Query: 643 KVFLRDTTIVSPFSILLF-GGSINVQHQTGQVTI---DGWLK-VTAPAQTAVLFKELRLT 697
+VF+RD ++VS + ++LF GG +NVQ Q G + DGW++ V A Q A L KELR
Sbjct: 1293 RVFIRDCSMVSVYPLVLFGGGQVNVQLQRGAFVVSLDDGWIRFVAASHQVAELVKELRCE 1352
Query: 698 LHSILRQMIRNP 709
L +L+ I+NP
Sbjct: 1353 LDQLLQDKIKNP 1364
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 473 bits (1216), Expect = e-132, Method: Compositional matrix adjust.
Identities = 278/712 (39%), Positives = 412/712 (57%), Gaps = 70/712 (9%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D L+ V+H+++DE+HER+L D L+ V+KDLL H LKVILMSAT+++
Sbjct: 311 WLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLL-----HFRSDLKVILMSATLNAE 365
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
FS YFG+CP+I G T PV Y LED+ E I Y + +++ G VN +
Sbjct: 366 KFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRY-VPDQKEHRSQFKRGFMQGHVNRQE 424
Query: 125 GKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCH 184
++ +++ E + P Y YS T L+ +++D +D +L+ L+ +
Sbjct: 425 KEEK--------EAIYKERW--PAYIKELRTRYSASTVDVLQMMDDDKVDLNLIAALIRY 474
Query: 185 VDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLL--ALHSSVASVDQKKVFL 242
+ +GAILVFLPG I L D L + F SD L LHS + +V+Q +VF
Sbjct: 475 IVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFLIIPLHSLMPTVNQTQVFK 531
Query: 243 RPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQ 302
+ P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q +S+M +W+S+ANA+Q
Sbjct: 532 KTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQ 591
Query: 303 RRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
R+GRAGRV+PG CY LY R L+ YQ+PE+ R PL ELCLQIK+L LG I FLS+
Sbjct: 592 RKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSR 650
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP EA+ +I L E+ A++ EELTPLG HLA+LPV+ IGKM+LFG +F CL P
Sbjct: 651 LMDPPSNEAVVLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDP 710
Query: 423 ILSISAFLSYKSPFIYP--KDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAY 480
+L+I+A LS+K PF+ P K++ + R +LA T+SDHL ++ A+
Sbjct: 711 VLTIAASLSFKDPFVIPLGKEKIADARRKELA--------------KETRSDHLTVVNAF 756
Query: 481 KKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGK 540
+ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L G +
Sbjct: 757 EGWEEA-KRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFV----------- 804
Query: 541 KKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSA 600
S S + N+ +++ I+KA++CAGLYP VA L RK
Sbjct: 805 ------SSRSPKDPKANINSDNEKIIKAVICAGLYPKVAKIRLN-----LGKKRKMVKVH 853
Query: 601 AKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLF 660
K+ DG V IHP S+N + F + +L++ K+ T+ ++L D T VSP+ +L F
Sbjct: 854 TKS-----DGL--VSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 906
Query: 661 GGSINVQHQTGQ--VTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ 710
GG I++Q Q + +D W+ +P + A L K LR L S+L++ I +P
Sbjct: 907 GGDISIQKDKDQEIIAVDEWIVFQSPERIAHLVKGLRKELDSLLQEKIESPH 958
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 285/739 (38%), Positives = 428/739 (57%), Gaps = 75/739 (10%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+LQ D L+ V+H+++DE+HER+L D L+ V+KDLL +S LKVILMSAT+++
Sbjct: 318 WLQSDPYLSSVSHIVLDEIHERNLQSDVLMTVVKDLLNFRS-----DLKVILMSATLNAE 372
Query: 65 LFSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
FS YFG+CP+I G T PV Y LEDV E I Y + +++ G VN +
Sbjct: 373 KFSEYFGNCPMIHIPGFTFPVVEYLLEDVIEKIRY-VPEQKEHRSQFKRGFMQGHVNRQE 431
Query: 125 GKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCH 184
++ +++ E + P Y YS T ++ + +D +D +L+ L+ +
Sbjct: 432 KEEK--------EAIYKERW--PDYVRELRRRYSASTVDVIEMMEDDKVDLNLIVALIRY 481
Query: 185 VDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLL--ALHSSVASVDQKKVFL 242
+ +GAILVFLPG I L D L + F SD L LHS + +V+Q +VF
Sbjct: 482 IVLEEEDGAILVFLPGWDNISTLHDLLMSQVMF---KSDKFLIIPLHSLMPTVNQTQVFK 538
Query: 243 RPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQ 302
R P +RK++IATNIAETSITIDDVVYV D G+ KE +++Q +S+M +W+S+ANA+Q
Sbjct: 539 RTPPGVRKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQ 598
Query: 303 RRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
R+GRAGRV+PG CY LY R L+ YQ+PE+ R PL ELCLQIK+L LG I FLS+
Sbjct: 599 RKGRAGRVQPGHCYHLYNGLR-ASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSR 657
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
++PP EA+ +I L E+ A++ EELTPLG HLA+LPV+ IGKM+LFG +F CL P
Sbjct: 658 LMDPPSNEAVLLSIRHLMELNALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDP 717
Query: 423 ILSISAFLSYKSPFIYP--KDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAY 480
+L+I+A LS+K PF+ P K++ + R +LA T+SDHL ++ A+
Sbjct: 718 VLTIAASLSFKDPFVIPLGKEKIADARRKELA--------------KDTRSDHLTVVNAF 763
Query: 481 KKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGK 540
+ W++ +RG + + +C +YFLSS+ + M+ +M+ QF L G ++ N
Sbjct: 764 EGWEEA-RRRGFRYEKDYCWEYFLSSNTLQMLHNMKGQFAEHLLGAGFVSSRNPK----- 817
Query: 541 KKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSA 600
D +S N+ +++ I+KA++CAGLYP VA +R +
Sbjct: 818 ---DPES---------NINSDNEKIIKAVICAGLYPKVA------------KIRLNLGKK 853
Query: 601 AKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLF 660
K V+ V +HP S+N + F + +L++ K+ T+ ++L D T VSP+ +L F
Sbjct: 854 RKMVKVYTKTDGLVAVHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTEVSPYCLLFF 913
Query: 661 GGSINVQHQTGQVTI--DGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ----NSTI 714
GG I++Q Q TI D W+ +PA+ A L KELR L +L++ I +P N T
Sbjct: 914 GGDISIQKDNDQETIAVDEWIVFQSPARIAHLVKELRKELDILLQEKIESPHPVDWNDTK 973
Query: 715 ANN-EVVKSMIQLLLEEDK 732
+ + V+ ++I L+ ++K
Sbjct: 974 SRDCAVLSAIIDLIKTQEK 992
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle PE=2
SV=2
Length = 1293
Score = 364 bits (934), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 247/711 (34%), Positives = 373/711 (52%), Gaps = 85/711 (11%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ L GV+H+IVDE+HER + DFLL++L+D+++ P L VILMSAT+D+ FS+
Sbjct: 495 EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDT-----YPDLHVILMSATIDTTKFSK 549
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
YFG CPV+ GR PV +FLED+ + ++ + +S RR +K
Sbjct: 550 YFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAES-----------------RRKRKE 592
Query: 129 LVLSGWGDDSLLSEEY----INPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCH 184
+ ++ LLSE+ IN Y+ YS++TR + L+E + ++LLE L+ H
Sbjct: 593 VE----DEEQLLSEDKDEAEIN--YNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMH 646
Query: 185 VDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRP 244
+ GAILVFLPG I L+ L + FG S +L HS + +Q+KVF
Sbjct: 647 IKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPV 706
Query: 245 PEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRR 304
PE + K+I++TNIAETSITIDD+V+V D + + + S L+S W S+ N QR+
Sbjct: 707 PEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRK 766
Query: 305 GRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKAL 364
GRAGRV+PG C++L +R R++ L PEM R PL E+ L IKLL LG I FLSKAL
Sbjct: 767 GRAGRVRPGFCFTLCSRARFQAL-EDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKAL 825
Query: 365 EPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPIL 424
EPP +A+ A +L E+ ++ ++ELTPLG LA+LP++ +GKMM+ G +FGC + ++
Sbjct: 826 EPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGC-ADLM 884
Query: 425 SISAFLSYKSPF--IYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
+I A SY S F ++ D + + +LA L G + SDH+ ++VA +
Sbjct: 885 AIMA--SYSSTFSEVFSLD----IGQRRLANHQKALSG-------TKCSDHVAMIVASQM 931
Query: 483 WQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKK 542
W++ +RG +FC L S M +I D + Q LL G P + +
Sbjct: 932 WRR-EKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAG---FPEECMISHEVD 987
Query: 543 DDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAK 602
+ +D D+ + + A+LC GLYPN+ ++ RK + +K
Sbjct: 988 ERID---GDDPVL--------DVSLALLCLGLYPNICVHKEK---------RKVLTTESK 1027
Query: 603 AHPVWYDGRREVHIHPSSIN-SQLK-SFEHPFLVFLEKVETNKVFLRDTTIVSPFSILLF 660
A +H +S+N S L +F +PF VF EK+ T V + ++VSP ++LF
Sbjct: 1028 A----------ALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMVSPLQVILF 1077
Query: 661 GGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQN 711
G V +D WL + A L+ L ++ NP +
Sbjct: 1078 GSRKIDLAANNIVRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNPSD 1128
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 352 bits (903), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 225/710 (31%), Positives = 358/710 (50%), Gaps = 99/710 (13%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ P+++++LMSAT+D+++F
Sbjct: 496 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAY-----PEVRIVLMSATIDTSMFCE 550
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
YF +CP+I GRT PV YFLED + ++ + N N
Sbjct: 551 YFFNCPIIEVYGRTFPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDAN----CN 606
Query: 129 LVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHVDET 188
L+ GD+ Y +TR ++ +LNE ++L+E L+ +++
Sbjct: 607 LIC---GDE-------------------YGAETRISMAQLNEKETPFELIEALLLYIETL 644
Query: 189 CGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKI 248
GA+LVFLPG I+ + L + FG +L LHS + +Q+KVF P +
Sbjct: 645 NVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQ-ILPLHSQIPREEQRKVFDPVPSGV 703
Query: 249 RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRRGRAG 308
K+I++TNIAETSITI+DVVYV D + K + + +++ W S+ N QR+GRAG
Sbjct: 704 TKIILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 763
Query: 309 RVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPK 368
RV+PG C+ L +R R+E+L + PEM R PL E+ L IKLL LG I FL+KA+EPP
Sbjct: 764 RVRPGFCFHLCSRARFERL-ETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 822
Query: 369 EEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISA 428
+A+ A L E+ A++ ++ELTPLG LAKLP++ GKMM+ G IF I +ISA
Sbjct: 823 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTISA 882
Query: 429 FLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILL 488
+ PFI E +L + G + SDH+ L+ ++ W +
Sbjct: 883 ATCFPEPFI--------SEGKRLGYIHRNFAG-------NRFSDHVALLSVFQAWDDARM 927
Query: 489 KRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSW 548
G +A +FC L+ + + M + ++Q +L ++S
Sbjct: 928 G-GEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL---------------------INSG 965
Query: 549 FSDESQMFNMYANHS-----SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKA 603
F +E + ++ N +V ++L G+YPNV ++ K
Sbjct: 966 FPEECLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKE------------------KR 1007
Query: 604 HPVWYDGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILL 659
+ +GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LL
Sbjct: 1008 KILTTEGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLL 1066
Query: 660 FGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
F S VQ V +D W+++ + A LR + +++ ++ + P
Sbjct: 1067 F-ASKKVQSDGQLVLVDDWIRLQISHEAAACITALRAAMEALVVEVTKQP 1115
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 350 bits (898), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 225/710 (31%), Positives = 359/710 (50%), Gaps = 99/710 (13%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ P+++++LMSAT+D+++F
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAY-----PEVRIVLMSATIDTSMFCE 553
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
YF +CP+I GRT+PV YFLED + ++ + N N
Sbjct: 554 YFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDAN----CN 609
Query: 129 LVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHVDET 188
L+ GD+ Y +TR ++ +LNE ++L+E L+ +++
Sbjct: 610 LIC---GDE-------------------YGPETRLSMSQLNEKETPFELIEALLKYIETL 647
Query: 189 CGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKI 248
GA+LVFLPG I+ + L + FG +L LHS + +Q+KVF P +
Sbjct: 648 NVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQ-ILPLHSQIPREEQRKVFDPVPVGV 706
Query: 249 RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRRGRAG 308
KVI++TNIAETSITI+DVVYV D + K + + +++ W S+ N QR+GRAG
Sbjct: 707 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 766
Query: 309 RVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPK 368
RV+PG C+ L +R R+E+L + PEM R PL E+ L IKLL LG I FL+KA+EPP
Sbjct: 767 RVRPGFCFHLCSRARFERL-ETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 825
Query: 369 EEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISA 428
+A+ A L E+ A++ ++ELTPLG LAKLP++ GKMM+ G IF I +I+A
Sbjct: 826 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAA 885
Query: 429 FLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILL 488
+ PFI E +L + G + SDH+ L+ ++ W +
Sbjct: 886 ATCFPEPFIN--------EGKRLGYIHRNFAG-------NRFSDHVALLSVFQAWDDARM 930
Query: 489 KRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSW 548
G +A +FC L+ + + M + ++Q +L ++S
Sbjct: 931 G-GEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL---------------------INSG 968
Query: 549 FSDESQMFNMYANHS-----SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKA 603
F ++ + ++ N +V ++L G+YPNV ++ K
Sbjct: 969 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKE------------------KR 1010
Query: 604 HPVWYDGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILL 659
+ +GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LL
Sbjct: 1011 KILTTEGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLL 1069
Query: 660 FGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
F S VQ V +D W+K+ + A LR + +++ ++ + P
Sbjct: 1070 F-ASKKVQSDGQIVLVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQP 1118
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 350 bits (898), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 225/710 (31%), Positives = 359/710 (50%), Gaps = 99/710 (13%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ P+++++LMSAT+D+++F
Sbjct: 499 EAGIRGISHVIVDEIHERDINTDFLLVVLRDVVQAY-----PEVRIVLMSATIDTSMFCE 553
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
YF +CP+I GRT+PV YFLED + ++ + N N
Sbjct: 554 YFFNCPIIEVYGRTYPVQEYFLEDCIQMTHFVPPPKDKKKKDKDDDGGEDDDAN----CN 609
Query: 129 LVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHVDET 188
L+ GD+ Y +TR ++ +LNE ++L+E L+ +++
Sbjct: 610 LIC---GDE-------------------YGPETRLSMSQLNEKETPFELIEALLKYIETL 647
Query: 189 CGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKI 248
GA+LVFLPG I+ + L + FG +L LHS + +Q+KVF P +
Sbjct: 648 NVPGAVLVFLPGWNLIYTMQKHLEMNPHFGSHRYQ-ILPLHSQIPREEQRKVFDPVPVGV 706
Query: 249 RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRRGRAG 308
KVI++TNIAETSITI+DVVYV D + K + + +++ W S+ N QR+GRAG
Sbjct: 707 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 766
Query: 309 RVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPK 368
RV+PG C+ L +R R+E+L + PEM R PL E+ L IKLL LG I FL+KA+EPP
Sbjct: 767 RVRPGFCFHLCSRARFERL-ETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 825
Query: 369 EEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISA 428
+A+ A L E+ A++ ++ELTPLG LAKLP++ GKMM+ G IF I +I+A
Sbjct: 826 LDAVIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAICTIAA 885
Query: 429 FLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILL 488
+ PFI E +L + G + SDH+ L+ ++ W +
Sbjct: 886 ATCFPEPFIN--------EGKRLGYIHRNFAG-------NRFSDHVALLSVFQAWDDARM 930
Query: 489 KRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSW 548
G +A +FC L+ + + M + ++Q +L ++S
Sbjct: 931 G-GEEAEIRFCEHKRLNMATLRMTWEAKVQLKEIL---------------------INSG 968
Query: 549 FSDESQMFNMYANHS-----SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKA 603
F ++ + ++ N +V ++L G+YPNV ++ K
Sbjct: 969 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKE------------------KR 1010
Query: 604 HPVWYDGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILL 659
+ +GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LL
Sbjct: 1011 KILTTEGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLL 1069
Query: 660 FGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
F S VQ V +D W+K+ + A LR + +++ ++ + P
Sbjct: 1070 F-ASKKVQSDGQIVLVDDWIKLQISHEAAACITGLRAAMEALVVEVTKQP 1118
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 348 bits (893), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 230/711 (32%), Positives = 361/711 (50%), Gaps = 99/711 (13%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+D+++ P+++VILMSAT+D+++F
Sbjct: 501 ESGIRGISHVIVDEIHERDINTDFLLVVLRDVIQA-----FPEIRVILMSATIDTSMFCE 555
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
YF +CP+I GRT PV Y+LED + + + N N
Sbjct: 556 YFFNCPIIEVFGRTFPVQEYYLEDCIQMTQFIPPPRDKKKKDKDEEGGDDEETN----CN 611
Query: 129 LVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHVDET 188
LV GDD Y +TR+++ +L+E +L+E L+ +++
Sbjct: 612 LVC---GDD-------------------YGPETRRSMSQLSEKETPLELIEALLKYIETL 649
Query: 189 CGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKI 248
GA+LVFLPG I+ + L + FG S +L LHS + +Q+KVF P+ I
Sbjct: 650 NVPGAVLVFLPGWNLIYAMQKHLEMNPHFGS-HSYCILPLHSQIPRDEQRKVFDPVPDGI 708
Query: 249 RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRRGRAG 308
KVI++TNIAETSITI+DVVYV D + K + S +++ W S+ N QR+GRAG
Sbjct: 709 IKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSHNNMTNYATVWASKTNLEQRKGRAG 768
Query: 309 RVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPK 368
RV+PG C+ L ++ R++KL + PE+ R PL E+ L IKLL LG I FLSKA+EPP
Sbjct: 769 RVRPGFCFHLCSKARFDKL-ETHLTPEIFRTPLHEVALSIKLLRLGGIGHFLSKAIEPPP 827
Query: 369 EEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISA 428
+A+ A L E+ A++ ++ELTPLG LAKLP++ +GKMM+ G IF + +ISA
Sbjct: 828 LDAVIEAEHTLRELDALDSNDELTPLGRILAKLPIEPRLGKMMIIGCIFYVGDALCTISA 887
Query: 429 FLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILL 488
+ PFI E +L + G + SDH+ L+ ++ W +
Sbjct: 888 ATCFPEPFI--------SEGRRLGYVHRNFAG-------NRFSDHVALLSVFQAWDDARM 932
Query: 489 KRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSW 548
G A +FC L+ + + M + ++Q +L + G
Sbjct: 933 G-GEDAETRFCEHKRLNMATLRMTWEAKVQLKDILVNAG--------------------- 970
Query: 549 FSDE---SQMFNMYA--NHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKA 603
F +E +Q+FN N+ +V ++L G+YPNV ++ K
Sbjct: 971 FPEECLMNQVFNNTGPDNNLDVVISLLAFGVYPNVCYHKE------------------KR 1012
Query: 604 HPVWYDGRREVHIHPSSINSQLKS----FEHPFLVFLEKVETNKVFLRDTTIVSPFSILL 659
+ +GR + IH SS+N + + PF VF EK+ T + + T+VSP +LL
Sbjct: 1013 KILTTEGRNAL-IHKSSVNCPFSNQDLKYPSPFFVFSEKIRTRAISAKGMTMVSPLQLLL 1071
Query: 660 FGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQ 710
F S V + +D W+K++ + + LR L +++ ++ + P+
Sbjct: 1072 F-ASKKVMSDGEFIHLDDWIKLSMAHEESACITALRAALEALVVEVTKEPE 1121
>sp|P0C7L7|YUM14_USTMA Putative DEAH-box ATP-dependent helicase UM11114 OS=Ustilago maydis
(strain 521 / FGSC 9021) GN=UM04112 PE=3 SV=1
Length = 1567
Score = 346 bits (887), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 247/748 (33%), Positives = 401/748 (53%), Gaps = 66/748 (8%)
Query: 8 GDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFS 67
GD +L G++HV+VDEVHER++ DFLL+ L++LL + S ++KV+LMSAT++ F+
Sbjct: 858 GDTDLKGISHVVVDEVHERNVDSDFLLLELRELLRRNS-----RIKVVLMSATINQETFA 912
Query: 68 RYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGP-VNNRRGK 126
YFG P I+ GRT V ++LED+ + +R + + S++ G + G+
Sbjct: 913 SYFGKAPCISIPGRTFAVEDHYLEDIVQQSGFR-----PSGNEWRGSARGGKQIEQEIGQ 967
Query: 127 KNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHVD 186
L G D EE S G + + L + V++ E+L D
Sbjct: 968 LRAHLQAQGVD----EETCKAVESLSRSG--GRISYELLGAVVRYVVERAENEELSGAAD 1021
Query: 187 ETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPE 246
G GAILVF PGV EI +D + S R G S +L LH+++++ +Q++VF
Sbjct: 1022 GDVG-GAILVFCPGVGEIRQAIDAITTSVR--GQSKVEILPLHANLSADEQRRVFQPVGA 1078
Query: 247 KIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRRGR 306
RK++++TN+AETSITI DV YV D GR KE R+ + L+ +VE W S+A +QRRGR
Sbjct: 1079 GRRKIVVSTNVAETSITIPDVSYVVDTGRVKETRFEPESGLTRLVECWASRAACKQRRGR 1138
Query: 307 AGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGR-IKIFLSKALE 365
AGRV+ G C+ LY+R+ EK M Q PEM+R+PL L L++K + +K +L+KAL+
Sbjct: 1139 AGRVRAGECFRLYSRYVDEKKMAAQQTPEMRRVPLESLFLEVKSMREDEDVKEYLNKALD 1198
Query: 366 PPKEEAITTAISVLYEVGAIEGDE----ELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLS 421
PP ++ A++ L E GA++ D LT LG HLA+LP+D+ + K+++ G IFGCL
Sbjct: 1199 PPSLASMDAALTNLIEAGALQSDRGYKSRLTSLGKHLAQLPLDLRLAKLLIMGTIFGCLG 1258
Query: 422 PILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYK 481
P+L++++ +S K F P ++++ +A+ + + +SD L A++
Sbjct: 1259 PMLTVASIMSCKPLFNTPFEKREEASKARASFAA-----------AGCRSDLLADAAAFE 1307
Query: 482 KWQKILLKRGTKAA-QQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGK 540
+WQ + +R T +++C +F+S S + I+ R+ + L ++G + P+ + G
Sbjct: 1308 EWQTMRAQRKTNGEIREWCESHFISQSSLRDIQTNRLDLLSHLQEMGFV-APDYSAFG-- 1364
Query: 541 KKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSA 600
+ DE ++M A H+ ++++++ AGL+P V + A S+ A
Sbjct: 1365 -------VYDDE--RYDMNAQHAGVLRSVILAGLWPAVVRIDVPSAKFDQSSSGTVQREA 1415
Query: 601 AKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVET-----NKVFLRDTTIVSPF 655
++D V +HPSS K FE +L K T +KV+LRD T V F
Sbjct: 1416 EARQVKYFDRNGRVFLHPSSTLFSCKGFESSYLTTFAKSSTGAGADSKVYLRDATEVPLF 1475
Query: 656 SILLFGGSINVQHQTGQVTI-----------DGWLKVTAPAQTAVLFKELRLTLHSILRQ 704
++LLFGG + + H G + I + W+++ A A+ VL +LR L ++L
Sbjct: 1476 ALLLFGGKLKINHFAGGIGIGSNQSGGDAKDENWVRLRANARIGVLCAQLRRLLDAVLDH 1535
Query: 705 MIRNPQNS-TIANNEVVKSMIQLLLEED 731
I PQ+ + + V S+I +L+ D
Sbjct: 1536 AIDEPQDMFAVPGCKDVLSVIGQVLQRD 1563
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 327 bits (839), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 223/710 (31%), Positives = 354/710 (49%), Gaps = 100/710 (14%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ + G++HVIVDE+HER + DFLL+VL+ P+++++LMSAT+D+ +F
Sbjct: 501 EAGIRGISHVIVDEIHERDINTDFLLVVLR-----DVVLAYPEVRIVLMSATIDTTMFCE 555
Query: 69 YFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKN 128
YF +CP+I GRT PV YFLED + + E N N
Sbjct: 556 YFFNCPIIEVYGRTFPVQEYFLEDCIQMTQFIPPPKDKKKKDKEDDGGEDDDAN----CN 611
Query: 129 LVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHVDET 188
L+ GD+ Y +T+ ++ +LNE ++L+E L+ +++
Sbjct: 612 LIC---GDE-------------------YGPETKLSMSQLNEKETPFELIEALLKYIETL 649
Query: 189 CGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKI 248
GA+LVFLPG I+ + L + FG +L LHS + +Q+KVF P+ +
Sbjct: 650 NVPGAVLVFLPGWNLIYTMQKHLENNSHFGSHRYQ-ILPLHSQIPREEQRKVFDPVPDGV 708
Query: 249 RKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRRGRAG 308
KVI++TNIAETSITI+DVVYV D + K + + +++ W S+ N QR+GRAG
Sbjct: 709 TKVILSTNIAETSITINDVVYVIDSCKQKVKLFTAHNNMTNYATVWASKTNLEQRKGRAG 768
Query: 309 RVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPK 368
RV+PG C+ L +R R+++L + PEM R PL E+ L IKLL LG I FL+KA+EPP
Sbjct: 769 RVRPGFCFHLCSRARFDRL-ETHMTPEMFRTPLHEIALSIKLLRLGGIGQFLAKAIEPPP 827
Query: 369 EEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISA 428
+AI A L E+ A++ ++ELTPLG LAKLP++ GKMM+ G IF + +ISA
Sbjct: 828 LDAIIEAEHTLRELDALDANDELTPLGRILAKLPIEPRFGKMMIMGCIFYVGDAVCTISA 887
Query: 429 FLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILL 488
+ PFI E +L + G + SDH+ L+ ++ W +
Sbjct: 888 ATCFPEPFI--------SEGKRLGYIHRNFAG-------NRFSDHVALLSVFQAWDDARM 932
Query: 489 KRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSW 548
G +A +FC + L+ + + M + ++Q +L ++S
Sbjct: 933 S-GEEAEIRFCEQKRLNMATLRMTWEAKVQLKEIL---------------------INSG 970
Query: 549 FSDESQMFNMYANHS-----SIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKA 603
F ++ + ++ N +V ++L G+YPNV ++ K
Sbjct: 971 FPEDCLLTQVFTNTGPDNNLDVVISLLAFGVYPNVCYHKE------------------KR 1012
Query: 604 HPVWYDGRREVHIHPSSIN----SQLKSFEHPFLVFLEKVETNKVFLRDTTIVSPFSILL 659
+ +GR + IH SS+N SQ + PF VF EK+ T + + T+V+P +LL
Sbjct: 1013 KILTTEGRNAL-IHKSSVNCPFSSQDMKYPSPFFVFGEKIRTRAISAKGMTLVTPLQLLL 1071
Query: 660 FGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
F S VQ V ID W+++ + A +R + +++ ++ + P
Sbjct: 1072 F-ASKKVQSDGQIVFIDDWIRLQISHEAAACIT-IRAAMEALVVEVSKQP 1119
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 302 bits (774), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 242/801 (30%), Positives = 368/801 (45%), Gaps = 175/801 (21%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q + +L +IVDEVHER L DFLL VL+ LL ++ P LKVILMSAT++ +L
Sbjct: 266 IQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQR-----PDLKVILMSATINISL 320
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF PV+ GR P+T + + + +SKS ++ R
Sbjct: 321 FSSYFSHAPVVQVPGRLFPITVVYQPQEAD----------------QTASKSEKLDPRPF 364
Query: 126 KKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHV 185
+ L E I+ Y P + G DLL
Sbjct: 365 LRVL-------------EAIDNKYPPEERG--------------------DLL------- 384
Query: 186 DETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW-LLALHSSVASVDQKKVFLRP 244
VFL G+AEI +LD A+ + + W +L LHS+++ DQ KVF
Sbjct: 385 ----------VFLSGMAEITTVLD---AAQAYASLTQRWVVLPLHSALSVSDQDKVFDVA 431
Query: 245 PEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRR 304
P +RK I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WISQA+A QR+
Sbjct: 432 PAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRK 491
Query: 305 GRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKAL 364
GRAGR PG+CY LY Y+ PY VPE++R+ L L LQ+K +S+G + F +
Sbjct: 492 GRAGRTGPGVCYRLYAESDYDAFA-PYPVPEIRRVALDALVLQMKSMSVGDPRTF--PFI 548
Query: 365 EPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPIL 424
EPP ++ TAI L E GA++ E LTP+G LA+LPVDV+IGKM++ G +F P+L
Sbjct: 549 EPPPPASVETAILYLQEQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLAEPVL 608
Query: 425 SISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQ 484
+I+A LS +SPF + A+ L +D Q D L + W
Sbjct: 609 TIAAALSVQSPFTRSAQSNLDCATARRPLESD-------------QGDPFTLFNVFNAWV 655
Query: 485 KILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLIN-------------- 530
++ +R + ++++C + + +Y + ++R QF LL D GL++
Sbjct: 656 QVKSER-SGNSRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGLLSGAQVVAPGDSYSRL 714
Query: 531 -----------LPNKNQTGGKKKDDL-----DSWFSDE---------------------- 552
L +++ GG ++ + D SDE
Sbjct: 715 QQRRERRALHQLKRQHEEGGGRRRKVLRLQEDGCSSDEEDRKGSTSQRADSVDIQDVKFK 774
Query: 553 ------------SQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSN--LRKSSN 598
S ++ + +++K +L GLYP +A + +G S+ +
Sbjct: 775 LRHNLEQLQAAASSAQDLTRDQLALLKLVLGRGLYPQLAVPDAFNSGRKDSDQIFHTQAK 834
Query: 599 SAAKAHP--VWYDGRREVHIHPSSINSQ--------LKSFEHPFLVFLEKVETNKVFLRD 648
HP V+ + +H + Q S +H L F+ +ETNK +L +
Sbjct: 835 QGTVLHPTCVFANSPEVLHTQGQEASGQEGSQDGRDQMSCKHQLLAFVSLLETNKPYLVN 894
Query: 649 TTIVSPF-SILLFGGSINVQHQTGQVTIDGWLKVT-APAQTAV--LFKELRLTLH---SI 701
+ S+LLF SI+ ++ DGWL++ A +++AV L LRL H ++
Sbjct: 895 CVRIPALQSLLLFSRSIDTNGDCSRLVADGWLELQLADSESAVRLLATSLRLRAHWESAL 954
Query: 702 LRQMIRNPQNSTIANNEVVKS 722
RQ+ R Q + E V S
Sbjct: 955 DRQLARQAQRRKLEQEEDVGS 975
>sp|O94536|UCP12_SCHPO Putative ATP-dependent RNA helicase ucp12 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=ucp12 PE=3 SV=1
Length = 1327
Score = 295 bits (755), Expect = 9e-79, Method: Compositional matrix adjust.
Identities = 230/717 (32%), Positives = 342/717 (47%), Gaps = 126/717 (17%)
Query: 12 LTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRYFG 71
L+ ++ V+VDEVHERS+ D LL +LK ++ + P LKVILMSATV+S+ F YFG
Sbjct: 694 LSTLSCVVVDEVHERSIENDILLTLLKLVISR-----IPNLKVILMSATVNSDTFKYYFG 748
Query: 72 DCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRGKKNLVL 131
+ + GRT P+ Y++E D A + + + P RR KK
Sbjct: 749 NAGHLHIHGRTFPIKDYYIE------------DFAPKLNEDDDEEDVP---RRKKK---- 789
Query: 132 SGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHVDETCGE 191
E IDY L+ LV +D G
Sbjct: 790 --------------------------------------EYEIDYHLISRLVSSIDAELGS 811
Query: 192 --GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLRPPEKIR 249
G+ILVFLPGV+ I R + S +L LH+S+ + +Q++ F + R
Sbjct: 812 SSGSILVFLPGVSNIA----RCIREIKSKDGSKFEVLPLHASLNTSEQRRCFKTYTK--R 865
Query: 250 KVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRRGRAGR 309
K+I ATNIAETSITIDDVV V D GR K+ Y+ ++ L + E W S+A +QRRGRAGR
Sbjct: 866 KIICATNIAETSITIDDVVAVIDSGRVKQIDYDVERDLVTFKETWASRAACQQRRGRAGR 925
Query: 310 VKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLL-----------SLGRIKI 358
VK GICY LYTR EK M PE+ R L ++CL + L + G IK
Sbjct: 926 VKKGICYKLYTRGFEEKGMLGQTPPEVLRTALSQVCLNVVPLVKRFSSAGNSVNQGSIKK 985
Query: 359 FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFG 418
F++ ++PP + + A+ L +VGA+ E+LT LG +L LP+D+ +GK+++FG IFG
Sbjct: 986 FMNSLIDPPNDATVDLALKKLIQVGALTVSEDLTGLGEYLVSLPIDLKLGKLLVFGSIFG 1045
Query: 419 CLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMV 478
L P L+I+A LS KSPF+ DE + + S S D L
Sbjct: 1046 YLEPALTITAILSTKSPFL-GDDEAREIR----------------SKQSQGWGDVLADAR 1088
Query: 479 AYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTG 538
Y W +IL RG K Q+C + L + + IR R L L+ L K TG
Sbjct: 1089 VYHNWLEILETRGVKKTVQWCEEMHLHYTTLQQIRQNR---NELSEAAQLLELTTKKLTG 1145
Query: 539 GKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAAT---EQGVAGAALSNLRK 595
+ D W+S E+ +++ ++ A L PNV ++ + +L
Sbjct: 1146 -----NFD-WYSTENL---------TVLSTLIAAALSPNVVKCVYPDKKFVASFSGSLEM 1190
Query: 596 SSNSAAKAHPVWYDGRREVHIHPSS---INSQLKSFEHPFLVFLEKVETNKVFLRDTTIV 652
A+ + + + IHPSS +NS S F+ + +KVET K FLR+ T +
Sbjct: 1191 EQE--ARLTKFYDQNNQRLFIHPSSTMFVNSPNAS-RCTFVAYEQKVETTKPFLRNCTPI 1247
Query: 653 SPFSILLFGGSINVQHQTGQ-VTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRN 708
+ + ++L G + + G+ + +D + A + +L K L+ L + L + + +
Sbjct: 1248 NTYGMILLGANDILIDPLGKGLILDQAYCIKAWPKVVILLKMLKRCLDASLHERLES 1304
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens GN=YTHDC2
PE=1 SV=2
Length = 1430
Score = 293 bits (750), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 195/615 (31%), Positives = 312/615 (50%), Gaps = 98/615 (15%)
Query: 168 LNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDR-LAASYRFGGPSSDW-L 225
+++ +D DL+ L+ ++ +C GA+L+FLPG EI L DR L RF + + +
Sbjct: 599 FDDEKVDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADSTHRYQV 658
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
LHS++ + DQKKV PP +RK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 659 FMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 718
Query: 286 KLSSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
++ + WIS+A+A QR+GRAGR +PGIC+ L++R R++ ++ +Q PE+ RMPL ELC
Sbjct: 719 FVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLE-FQTPELLRMPLQELC 777
Query: 346 LQIKLLSLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L KLL+ I FL KA EPP + A+ +L + A++ E+LT LG+HLA LPV
Sbjct: 778 LHTKLLAPVNCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPV 837
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ +GKM+L + CL PIL+I+ L+Y+ PF+ P Q + A+L K
Sbjct: 838 EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK----RAAMLCRK------ 887
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+ SDH+ L+ A++ WQK R + FC K FLS + M +I MR Q L
Sbjct: 888 RFTAGAFSDHMALLRAFQAWQK---ARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQL 944
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
G + + + GG +D N + + ++VKA L AG+YPN+ ++
Sbjct: 945 RASGFV----RARGGGDIRD------------VNTNSENWAVVKAALVAGMYPNLVHVDR 988
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQ---------------LKSF 628
NL + K V HP+S+ SQ +K+
Sbjct: 989 -------ENLVLTGPKEKK-----------VRFHPASVLSQPQYKKIPPANGQAAAIKAL 1030
Query: 629 EHPFLVFLEKVETNKVF-LRDTTIVSPFSILLFGG----SINVQHQTGQVTIDG------ 677
+L++ E +++ +R + V+P +IL+F G + N + +DG
Sbjct: 1031 PTDWLIYDEMTRAHRIANIRCCSAVTPVTILVFCGPARLASNALQEPSSFRVDGIPNDSS 1090
Query: 678 -------------------WLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNS-TIANN 717
WL T + A L +LR HS+ + +R P + +
Sbjct: 1091 DSEMEDKTTANLAALKLDEWLHFTLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDE 1150
Query: 718 EVVKSMIQLLLEEDK 732
++++I +L E++
Sbjct: 1151 ATIRAIIAVLSTEEQ 1165
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLL L+DLL+K P LK+IL SA +D NL
Sbjct: 301 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKH-----PTLKLILSSAALDVNL 355
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F RYFG CPVI +GR V FLED+ + Y
Sbjct: 356 FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 389
>sp|O60114|YG65_SCHPO Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15C4.05 PE=3 SV=1
Length = 1428
Score = 291 bits (745), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 211/727 (29%), Positives = 367/727 (50%), Gaps = 91/727 (12%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L+ + VTH+I+DEVHERS+ D LLI + LL++ P LK+I+MSAT+++
Sbjct: 743 LEVGNEIESVTHLIIDEVHERSIDSDLLLIHVLHLLKQH-----PHLKIIIMSATLNAEK 797
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIR------YEASSKSGP 119
F YF +IT G+T+PV ++LED+ + +AA YE +
Sbjct: 798 FQLYFEGSNLITIPGKTYPVHRFYLEDILSQFGNDKSFGNAAGQDVIEEDDYETDQQDAS 857
Query: 120 VNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLE 179
++N+ +D+++ I +Y NE I+Y L+
Sbjct: 858 ISNKSA----------EDAIVEMNLIPAWY-------------------NEKAINYGLIV 888
Query: 180 DLVCHVDETCGEG------AILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVA 233
L+ ++ EG +LVFLPG++EI + + F + LHS+++
Sbjct: 889 YLLKYI---FTEGDPKFSKCVLVFLPGISEILRVKSLIEDMPMFRNHRKFCIYMLHSTLS 945
Query: 234 SVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVED 293
S Q+ VF PP+ RK++++TNIAET +TI DV V D G H+E RYNS++ LS + +
Sbjct: 946 SAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSRRHLSRLTDT 1005
Query: 294 WISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSL 353
++S+ANA+QR GRAGRV+ GICY L+++ +++ YQ PE+ R+ L E+ L++K+ +
Sbjct: 1006 FVSKANAKQRSGRAGRVQEGICYHLFSKFKHDTQFLSYQTPEILRLNLQEVVLRVKMCQM 1065
Query: 354 GRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLF 413
G ++ L KAL+PP I A+ L++VGA+ +E+LT LG L++LPVD +GK+++
Sbjct: 1066 GDVQDVLGKALDPPSSTNIIRALEKLHQVGALSENEKLTKLGKFLSQLPVDANLGKILVL 1125
Query: 414 GGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDH 473
G + C+ SI A L+ SPF D + + +A+L+ + +T+SD
Sbjct: 1126 GCFYKCVDAASSIVAMLTIGSPFRKSVDNEFSANKARLSFAKE-----------NTRSDL 1174
Query: 474 LVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPN 533
+++ AY W++I L F + +L+ + M ++IQ + L D+ L+ +
Sbjct: 1175 VLMYYAYCAWREICLSPLGPDEDSFAKEKYLNLEALSMTESLKIQLLSELKDMKLLGASD 1234
Query: 534 KNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNL 593
+ T K + F+ + ++ + ++ I+ ++ A LYPN+ + S L
Sbjct: 1235 VD-TCKSLKRSICRRFAVIPKEHDINSGNAEILCGVIAASLYPNILRYD--YEKRQWSTL 1291
Query: 594 RKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKV--FLRDTTI 651
S+N + V + R E+ PS F+ + + + + ++ +TT+
Sbjct: 1292 --STNKRVRILDVSVNNRSELPNMPSK-----------FVAYTNMMSSTRASEYVNETTM 1338
Query: 652 VSPFSILLFGGSINVQHQ--TGQVTIDGWLKVTAPAQTAVLFKELRLTLH-SILRQMIRN 708
V+ +L+ G + V+++ GQ +D + V F+ + ++ SILR+ I
Sbjct: 1339 VTLRQLLMMCG-LKVENRVSVGQAKLDNF---------TVYFENVYVSASLSILRRFIET 1388
Query: 709 PQNSTIA 715
N A
Sbjct: 1389 SLNEFFA 1395
>sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus GN=Ythdc2
PE=2 SV=1
Length = 1445
Score = 291 bits (744), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 191/615 (31%), Positives = 313/615 (50%), Gaps = 98/615 (15%)
Query: 168 LNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDR-LAASYRFGGPSSDW-L 225
+++ +D DL+ L+ ++ +C GAIL+FLPG EI L DR L RF + + +
Sbjct: 614 FDDEKVDLDLIMHLLYNICHSCDAGAILIFLPGYDEIVGLRDRILFDDKRFADNTHRYQV 673
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
LHS++ + DQKKV PP +RK+I++TNIAETSIT++DVV+V D G+ KE +++
Sbjct: 674 FMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALN 733
Query: 286 KLSSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
++ + WIS+A+A QR+GRAGR +PGIC+ L++R R++ ++ +Q PE+ RMPL ELC
Sbjct: 734 FVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLE-FQTPELLRMPLQELC 792
Query: 346 LQIKLLSLGRIKI--FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L KLL+ I FL KA EPP + A+ +L + A++ E+LT LG+HLA LPV
Sbjct: 793 LHTKLLAPVNCTIADFLMKAPEPPPALIVRNAVQMLKTIDAMDAWEDLTELGYHLADLPV 852
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ +GKM+L + CL PIL+I+ L+Y+ PF+ P Q + A+L K
Sbjct: 853 EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQK----RAAMLCRK------ 902
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+ T SDH+ L+ A++ WQK R + FC K FLS + M +I MR Q L
Sbjct: 903 RFTAGTFSDHMALLRAFQAWQK---ARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQL 959
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
G + + + GG +D N + + ++VKA L AG+YPN+ ++
Sbjct: 960 RASGFV----RARGGGDIRD------------VNTNSENWAVVKAALVAGMYPNLVHVDR 1003
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQ---------------LKSF 628
L+ ++ ++V HP+S+ SQ +++
Sbjct: 1004 --ENVILTGPKE----------------KKVRFHPTSVLSQPQYKKIPPANGQAAAIQAL 1045
Query: 629 EHPFLVFLEKVETNKVF-LRDTTIVSPFSILLFGGSINVQHQTGQ--------------- 672
+L++ E +++ +R + V+P ++L+F G + Q
Sbjct: 1046 PTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRADGIPNDSS 1105
Query: 673 --------------VTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNPQNS-TIANN 717
+ +D WL + A L +LR HS+ + +R P + +
Sbjct: 1106 DSEMEDRTTANLAALKLDEWLNFKLEPEAASLLLQLRQKWHSLFLRRMRAPSKPWSQVDE 1165
Query: 718 EVVKSMIQLLLEEDK 732
++++I +L E++
Sbjct: 1166 ATIRAIIAVLSTEEQ 1180
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/94 (54%), Positives = 60/94 (63%), Gaps = 5/94 (5%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+ GD L+ VTHVIVDEVHER DFLL L+DLL+K P LK+IL SA +D NL
Sbjct: 316 MAGDSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKH-----PTLKLILSSAALDVNL 370
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINY 99
F RYFG CPVI +GR V FLED+ + Y
Sbjct: 371 FIRYFGSCPVIYIQGRPFEVKEMFLEDILRTTGY 404
>sp|Q22307|DHX9_CAEEL Probable ATP-dependent RNA helicase A OS=Caenorhabditis elegans
GN=rha-1 PE=2 SV=3
Length = 1301
Score = 290 bits (742), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 223/722 (30%), Positives = 362/722 (50%), Gaps = 96/722 (13%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+ L G++HVI+DE+HER + DF+LIVL++++ L+V+LMSAT+D++LF+
Sbjct: 492 ENGLRGISHVIIDEIHERDVDTDFVLIVLREMISTYR-----DLRVVLMSATIDTDLFTN 546
Query: 69 YF------GDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNN 122
+F G PVIT GRT PV +++LED+ ++ + + + P ++
Sbjct: 547 FFSSIPDVGPTPVITMHGRTFPVQSFYLEDILHNLQH---MPEEPDQKKRKKGGPPPPDD 603
Query: 123 RRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLV 182
G + + G +N DPS +E + + R++E I + ++E ++
Sbjct: 604 DEGDEEVDDKG---------RNMNILTDPS----INESLKTAMSRISEKDIPFGVIEAIL 650
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFL 242
+ +GA+LVFLPG AEI L +RL FG + +L LHS + S +Q+KVF
Sbjct: 651 NDIASRGVDGAVLVFLPGWAEIMTLCNRLLEHQEFGQANKYEILPLHSQLTSQEQRKVFN 710
Query: 243 RPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQ 302
P K RK+I++TNIAETSITIDDVVYV D + KE Y S + W S+ N Q
Sbjct: 711 HYPGK-RKIIVSTNIAETSITIDDVVYVIDSCKAKERMYTSNNNMVHFATVWASKTNVIQ 769
Query: 303 RRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
RRGRAGRV+ G + L ++ R+E L + EM R+PL ++ L IKLL LG + FL K
Sbjct: 770 RRGRAGRVRAGYAFHLCSKMRFEAL-DDHGTAEMLRIPLHQIALTIKLLRLGSVGEFLGK 828
Query: 363 ALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSP 422
AL+PP + + + +VL +GA++ + ELT LG LA++P++ +I K+++ G G S
Sbjct: 829 ALQPPPYDMVVESEAVLQAMGALDRNLELTSLGKMLARMPIEPVIAKVLILGTALGAGSV 888
Query: 423 ILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKK 482
+ +++ +S+ +PF+ P+++ + +L G + SDH+ ++ +
Sbjct: 889 MCDVASAMSFPTPFV-PREKHHS-----------RLSGTQRKFAGNKFSDHVAIVSVIQG 936
Query: 483 WQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKK 542
+++ + + A ++FC +Y LS+ V+ M R Q +L +NQ +
Sbjct: 937 YREAVQMGASAAEREFCERYSLSNPVLKMTDGARRQLIDVL----------RNQCSFPE- 985
Query: 543 DDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAK 602
D F D S N ++++++L LYPNVA
Sbjct: 986 ---DILF-DISVNVNGPDRELNLMRSLLVMALYPNVA----------------------- 1018
Query: 603 AHPVWYDGRREV-HIHPSSI------------NSQLKSFEHPFLVFLEKVETNKVFLRDT 649
+Y G+R+V I SS N Q F P LVF EKV T + +
Sbjct: 1019 ----YYVGKRKVLTIEQSSALINKYSMLVPMNNRQEMDFPSPLLVFTEKVRTRCISCKQM 1074
Query: 650 TIVSPFSILLFGGSINVQHQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP 709
+++S +L+FG G V ID + + TA LR + ++L + NP
Sbjct: 1075 SVISAIQLLVFGSRKVECVGEGLVRIDETITIRMNVSTAAALIGLRPCIEALLVKSCENP 1134
Query: 710 QN 711
++
Sbjct: 1135 ES 1136
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 280 bits (716), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 186/534 (34%), Positives = 272/534 (50%), Gaps = 92/534 (17%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
+Q + +L +IVDEVHER L DFLL VL+ LL + P LKVILMSAT++ +L
Sbjct: 264 IQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR-----PDLKVILMSATINISL 318
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
FS YF + PV+ GR P+T + E +SKS ++ R
Sbjct: 319 FSSYFSNAPVVQVPGRLFPITVVYQPQEAEP----------------TTSKSEKLDPRPF 362
Query: 126 KKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHV 185
+ L E I+ Y P + G DLL
Sbjct: 363 LRVL-------------ESIDHKYPPEERG--------------------DLL------- 382
Query: 186 DETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDW-LLALHSSVASVDQKKVFLRP 244
VFL G+AEI +L+ A+ + + W +L LHS+++ DQ KVF
Sbjct: 383 ----------VFLSGMAEISAVLE---AAQTYASHTQRWVVLPLHSALSVADQDKVFDVA 429
Query: 245 PEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRR 304
P +RK I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WISQA+A QR+
Sbjct: 430 PPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRK 489
Query: 305 GRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKAL 364
GRAGR PG+C+ LY Y+ PY VPE++R+ L L LQ+K +S+G + F +
Sbjct: 490 GRAGRTGPGVCFRLYAESDYDAFA-PYPVPEIRRVALDSLVLQMKSMSVGDPRTF--PFI 546
Query: 365 EPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPIL 424
EPP ++ TAI L + GA++ E LTP+G LA+LPVDV+IGKM++ G +F + P+L
Sbjct: 547 EPPPPASLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVL 606
Query: 425 SISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQ 484
+I+A LS +SPF A+ L +D Q D L + W
Sbjct: 607 TIAAALSVQSPFTRSAQSSPECAAARRPLESD-------------QGDPFTLFNVFNAWV 653
Query: 485 KILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTG 538
++ +R ++ ++++C + + +Y + ++R QF LL D GL+ Q G
Sbjct: 654 QVKSER-SRNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVG 706
Score = 241 bits (616), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 179/595 (30%), Positives = 287/595 (48%), Gaps = 117/595 (19%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LALHSSVASVDQKKVFLRPPEKIRK 250
G +LVFL G+AEI +L+ A+ + + W+ L LHS+++ DQ KVF P +RK
Sbjct: 379 GDLLVFLSGMAEISAVLE---AAQTYASHTQRWVVLPLHSALSVADQDKVFDVAPPGVRK 435
Query: 251 VIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRRGRAGRV 310
I++TNIAETS+TID + +V D G+ KE Y+ Q KL + E WISQA+A QR+GRAGR
Sbjct: 436 CILSTNIAETSVTIDGIRFVVDSGKVKEMSYDPQAKLQRLQEFWISQASAEQRKGRAGRT 495
Query: 311 KPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKEE 370
PG+C+ LY Y+ PY VPE++R+ L L LQ+K +S+G + F +EPP
Sbjct: 496 GPGVCFRLYAESDYDAFA-PYPVPEIRRVALDSLVLQMKSMSVGDPRTF--PFIEPPPPA 552
Query: 371 AITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAFL 430
++ TAI L + GA++ E LTP+G LA+LPVDV+IGKM++ G +F + P+L+I+A L
Sbjct: 553 SLETAILYLRDQGALDSSEALTPIGSLLAQLPVDVVIGKMLILGSMFSLVEPVLTIAAAL 612
Query: 431 SYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLKR 490
S +SPF A+ L +D Q D L + W ++ +R
Sbjct: 613 SVQSPFTRSAQSSPECAAARRPLESD-------------QGDPFTLFNVFNAWVQVKSER 659
Query: 491 GTKAAQQFCSKYFLSSSVMYMIRDMRIQF-----------GTLLADIG------------ 527
++ ++++C + + +Y + ++R QF G A +G
Sbjct: 660 -SRNSRKWCRRRGIEEHRLYEMANLRRQFKELLEDHGLLAGAQAAQVGDSYSRLQQRRER 718
Query: 528 --LINLPNKNQTGGKKK-------DDLDSWFSDESQ------------------------ 554
L L +++ G ++ ++ D SDE +
Sbjct: 719 RALHQLKRQHEEGAGRRRKVLRLQEEQDGGSSDEDRAGPAPPGASDGVDIQDVKFKLRHD 778
Query: 555 ----------MFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNS----- 599
++ +++K +L GLYP +A + A ++ RK S+
Sbjct: 779 LAQLQAAASSAQDLSREQLALLKLVLGRGLYPQLAVPD------AFNSSRKDSDQIFHTQ 832
Query: 600 ---AAKAHPVW-YDGRREVHIHPSSINSQ----------LKSFEHPFLVFLEKVETNKVF 645
A HP + G EV +H + + S +H L F+ +ETNK +
Sbjct: 833 AKQGAVLHPTCVFAGSPEV-LHAQELEASNCDGSRDDKDKMSSKHQLLSFVSLLETNKPY 891
Query: 646 LRDTTIVSPF-SILLFGGSINVQHQTGQVTIDGWLKVT-APAQTAV--LFKELRL 696
L + + S+LLF S++ ++ DGWL++ A +++A+ L LRL
Sbjct: 892 LVNCVRIPALQSLLLFSRSLDTNGDCSRLVADGWLELQLADSESAIRLLAASLRL 946
>sp|Q06698|YL419_YEAST Putative ATP-dependent RNA helicase YLR419W OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=YLR419W PE=1
SV=1
Length = 1435
Score = 279 bits (713), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 231/793 (29%), Positives = 375/793 (47%), Gaps = 157/793 (19%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + + T V++DEVHERS+ D ++ ++K+LL H +K++LMSATV+ +L
Sbjct: 714 LQNARTMLENTIVVIDEVHERSIDTDLIVTLMKNLL-----HRVRGMKIVLMSATVNVDL 768
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRRG 125
F ++F EGRT P+T YFLED+ +++++ + A +
Sbjct: 769 FKKFFPGLATCHIEGRTFPITDYFLEDILSDLDFKIKREKALS----------------- 811
Query: 126 KKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVCHV 185
+ DDS+ + Y P R + K I+YDLL +V +V
Sbjct: 812 --------YDDDSVDERNNDDQYLKP----------RADSKFFTSGQINYDLLCQVVEYV 853
Query: 186 DETC----GEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVF 241
+ G+I+VFLPGV EI+ + LA + +L LHS++ DQK+VF
Sbjct: 854 HKRLKAANDNGSIIVFLPGVGEINKCCNLLANK---SNEADFMVLPLHSALTPEDQKRVF 910
Query: 242 LRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANAR 301
+ K RKV+++TNIAETSITIDD V D GR K YN + + ++E +IS+A +
Sbjct: 911 KKYHGK-RKVVVSTNIAETSITIDDCVATIDTGRAKSMFYNPKDNTTKLIESFISKAEVK 969
Query: 302 QRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLS 361
QRRGRAGRV+ G+ Y L++++ YE M +PE++R+PL L L +K + + +K FLS
Sbjct: 970 QRRGRAGRVREGLSYKLFSKNLYENDMISMPIPEIKRIPLESLYLSVKAMGIKDVKAFLS 1029
Query: 362 KALEPPKEEAITTAISVLYEVGAI-EGDEELTPLGHHLAKLPV-DVLIGKMMLFGGIFGC 419
AL+ P A+ A +L +G + E D+ LT LG ++ +PV D GK++++G +FGC
Sbjct: 1030 TALDAPPLPALQKAERILTTIGLVDESDKSLTQLGQFISLMPVMDSKHGKLLIYGILFGC 1089
Query: 420 ------LSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDH 473
L IL I PFI + ++ +++ L K E ++ D
Sbjct: 1090 TDISVLLVSILGIGVL-----PFIGGFENREKIKK-----LLCKYE---------SRGDL 1130
Query: 474 LVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPN 533
++ + + KI + + +++ LS + + I+ Q+ ++L D+G LP
Sbjct: 1131 FAVLEIVRDYFKI---KDSSIKRKYLRDNLLSYNKINEIKSSTAQYYSILKDVGF--LPM 1185
Query: 534 KNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATE-QGVAGAALSN 592
+ G SD N + I++AIL YP++A + V + S+
Sbjct: 1186 DYKVGS---------ISD----LNRNERNFDILRAILTGAFYPHIARVQLPDVKYLSTSS 1232
Query: 593 LRKSSNSAAKAHPVW-----YDGRREVH------------------------IHPSSI-- 621
+ AK W Y + E + IHPSS+
Sbjct: 1233 GAVEKDPEAKMIKYWIRSEEYQDKLEEYKTKISQETQKVDLEDLPLPATRAFIHPSSVLF 1292
Query: 622 --------NSQLKS---------------FEHPFLVFLEKVETNKVFLRDTTIVSPFSIL 658
+++L S ++PF++F TNK++LRD T + S+L
Sbjct: 1293 STNSVNLEDAKLLSEVDGPISRQSKIPTVVKYPFVLFTTSQVTNKLYLRDLTPTTTLSLL 1352
Query: 659 LFGGSINVQ-----HQTGQVTIDGWLKVTAPAQTAVLFKELRLTLHSILRQMIRNP---Q 710
LFGG+I+ H G + +D WL + + VL KELR L +R+ + +P +
Sbjct: 1353 LFGGAISYDIGGTIHSPG-IVVDNWLPIRTWCKNGVLIKELRTQLDEAIRKKLESPDYAK 1411
Query: 711 NSTIANNEVVKSM 723
S I N+ K++
Sbjct: 1412 KSQIDNSGADKTL 1424
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 182/549 (33%), Positives = 290/549 (52%), Gaps = 48/549 (8%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 703
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 704 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 763
Query: 288 SSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S+AN QRRGRAGR + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 764 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 822
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 823 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 882
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF + V++ K ALL S+D
Sbjct: 883 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK-ALL---------SHD 931
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 932 SG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 527 GLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVA 586
L+ P+ S N Y+ +VK +L AGLYPN+ QG
Sbjct: 990 FLVGKPSDCTLA--------------SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQG-- 1033
Query: 587 GAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN-KV 644
+ + K + V Y + + +H S+IN + +L + V++N V
Sbjct: 1034 -------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSV 1086
Query: 645 FLRDTTIVSPFSILLF-GGSINVQHQTGQVTI----DGWLKVTAPAQTAVLFKELRLTLH 699
F+RD++ V P ++LL G ++++ + TI L++ ++T L KELR L
Sbjct: 1087 FVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLKELRRALG 1146
Query: 700 SILRQMIRN 708
++ + +R+
Sbjct: 1147 RMVERSLRS 1155
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L P L+++LMSAT D+
Sbjct: 544 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL-----QRLNPALRLVLMSATGDNER 598
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 599 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 626
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 273 bits (698), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 182/545 (33%), Positives = 285/545 (52%), Gaps = 52/545 (9%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E V+D DL+ DLV +D G IL FLPG EI + RL G +S +L L
Sbjct: 689 DECVLDLDLITDLVLQIDAHGEPGGILCFLPGWQEIKGVQQRLLEM--LGSQNSRYLVLP 746
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQ+ +F RPP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 747 VHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVVDSGTHKEERYDLKTKV 806
Query: 288 SSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S++N QRRGRAGR + G Y L+ R R +K M YQVPE+ R PL L +Q
Sbjct: 807 SCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPRSRLDK-MPTYQVPEILRTPLENLVVQ 865
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKAL+ P +A+ A+ +L E+G ++ E LT LG LA++ D
Sbjct: 866 AKIHMPEKTAVEFLSKALDSPDIKAVDEAVILLQEIGVLDQREALTTLGKRLAQISTDPR 925
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ I+ CL P+L I + L+ + PF + V++AK L S +
Sbjct: 926 LAKAIVLASIYRCLHPLLVIVSCLT-RDPFSSSLQNRAEVDKAKAVL----------SRE 974
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L +R ++A + Y+L + I + QF L +
Sbjct: 975 SG--SDHLAFVRAVAGWEEVLRRRDSRARDNYLQDYYLYGPSLRFINGLVKQFSENLYEA 1032
Query: 527 GLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVA 586
L++ P S + S + N Y+ +VK +L AGLYPN+ QG
Sbjct: 1033 FLVSSP--------------SDCTMPSSVCNQYSEEEELVKGVLMAGLYPNLIQVRQG-- 1076
Query: 587 GAALSNLRKSSNSAAKAHPVWYDGRRE---VHIHPSSINSQLKSFEHPFLVFLEKVETN- 642
K P Y R + V +H S+IN + +L + V++N
Sbjct: 1077 ---------KVTRQGKFKPNSYAYRTKAGTVLLHKSTINREASKLYSRWLTYFMAVKSNG 1127
Query: 643 KVFLRDTTIVSPFSILLFGGS-INVQHQTGQVTI----DGWLKVTAPAQTAVLFKELRLT 697
VF+RD++ V P ++LL + I+V+ + T+ L + + T L ++ R++
Sbjct: 1128 GVFVRDSSQVHPLAVLLMTDTDIHVRDDGWRATVSLTDSDLLVLEGDSYTIRLLRDFRVS 1187
Query: 698 LHSIL 702
L ++
Sbjct: 1188 LSKMV 1192
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 61/88 (69%), Gaps = 5/88 (5%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQG+ +L GV+HV+VDEVHER + DFLLI+LK + + P L+++LMSAT D+
Sbjct: 588 LQGNPSLEGVSHVVVDEVHERDVNTDFLLILLKGIQKL-----NPDLRLVLMSATGDNQR 642
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FS YFG CPV+ G +PV Y+LE++
Sbjct: 643 FSHYFGGCPVVKVPGFMYPVKEYYLEEI 670
>sp|Q99PU8|DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30
PE=2 SV=1
Length = 1217
Score = 271 bits (694), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 181/549 (32%), Positives = 291/549 (53%), Gaps = 48/549 (8%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 669 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 726
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSIT++D+V+V D G HKE RY+ + K+
Sbjct: 727 VHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKV 786
Query: 288 SSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S+AN QRRGRAGR + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 787 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 845
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 846 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 905
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF + V++ K ALL S+D
Sbjct: 906 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK-ALL---------SHD 954
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 955 SG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1012
Query: 527 GLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVA 586
L+ GK D + S N Y+ +VK +L AGLYPN+ QG
Sbjct: 1013 FLV---------GKPSD-----CTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQG-- 1056
Query: 587 GAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN-KV 644
+ + K + V Y + + +H S+IN + +L + V++N V
Sbjct: 1057 -------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSV 1109
Query: 645 FLRDTTIVSPFSILLF-GGSINVQHQTGQVTI----DGWLKVTAPAQTAVLFKELRLTLH 699
F+RD++ V P ++LL G ++++ + TI L++ ++T L +E R L
Sbjct: 1110 FVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLREFRRALG 1169
Query: 700 SILRQMIRN 708
++ + +R+
Sbjct: 1170 RMVERSLRS 1178
Score = 93.6 bits (231), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L P L+++LMSAT D+
Sbjct: 567 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL-----QRLNPALRLVLMSATGDNER 621
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 622 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 649
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 271 bits (693), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 180/549 (32%), Positives = 289/549 (52%), Gaps = 48/549 (8%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 703
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETS TI+D+V+V D G HKE RY+ + K+
Sbjct: 704 VHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVVDSGLHKEERYDLKTKV 763
Query: 288 SSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S+AN QRRGRAGR + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 764 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 822
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + +
Sbjct: 823 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTEPR 882
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF + V++ K ALL S+D
Sbjct: 883 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK-ALL---------SHD 931
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 932 SG--SDHLAFVRAVAGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 527 GLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVA 586
L+ P+ S N Y+ +VK +L AGLYPN+ QG
Sbjct: 990 FLVGKPSDCTLA--------------SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQG-- 1033
Query: 587 GAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN-KV 644
+ + K + V Y + + +H S+IN + +L + V++N V
Sbjct: 1034 -------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSV 1086
Query: 645 FLRDTTIVSPFSILLF-GGSINVQHQTGQVTI----DGWLKVTAPAQTAVLFKELRLTLH 699
F+RD++ V P ++LL G ++++ + TI L++ ++T L KELR L
Sbjct: 1087 FVRDSSQVHPLAVLLLTDGDVHIRDDGRRATISLSDSDLLRLEGDSRTVRLLKELRRALG 1146
Query: 700 SILRQMIRN 708
++ + +R+
Sbjct: 1147 RMVERSLRS 1155
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L P L+++LMSAT D+
Sbjct: 544 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL-----QRLNPALRLVLMSATGDNER 598
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 599 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 626
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30 PE=2
SV=1
Length = 1220
Score = 267 bits (682), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 271/512 (52%), Gaps = 44/512 (8%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 672 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 729
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSITI+D+V+V D G HKE RY+ + K+
Sbjct: 730 VHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVVDSGLHKEERYDLKTKV 789
Query: 288 SSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S+AN QRRGRAGR + G Y L+ R R EK M P+QVPE+ R PL L LQ
Sbjct: 790 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEK-MAPFQVPEILRTPLENLVLQ 848
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 849 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 908
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF + V++ K ALL S+D
Sbjct: 909 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK-ALL---------SHD 957
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 958 SG--SDHLAFVRAVSGWEEVLRWQDRSSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 1015
Query: 527 GLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVA 586
L+ P+ S N Y+ +VK +L AGLYPN+ QG
Sbjct: 1016 FLVGKPSDCTLA--------------SAQCNEYSEEEELVKGVLMAGLYPNLIQVRQG-- 1059
Query: 587 GAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN-KV 644
+ + K + V Y + + +H S+IN + +L + V++N V
Sbjct: 1060 -------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSV 1112
Query: 645 FLRDTTIVSPFSILLF-GGSINVQHQTGQVTI 675
F+RD++ V P ++LL G ++++ + TI
Sbjct: 1113 FVRDSSQVHPLAVLLLTDGDVHIRDDGRRATI 1144
Score = 90.1 bits (222), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 45/88 (51%), Positives = 59/88 (67%), Gaps = 5/88 (5%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HV+VDE HER + DFLLI+LK L P L+++LMSAT D+
Sbjct: 570 LQSNPSLEGVSHVVVDEEHERDVNTDFLLILLKGL-----QRLNPALRLVLMSATGDNER 624
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 625 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 652
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 266 bits (679), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 174/512 (33%), Positives = 274/512 (53%), Gaps = 44/512 (8%)
Query: 169 NEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL-LA 227
+E +D DL+ DLV H+D G IL FLPG EI + RL + G S +L L
Sbjct: 646 DECALDLDLVTDLVLHIDARGEPGGILCFLPGWQEIKGVQQRLQEA--LGMHESKYLILP 703
Query: 228 LHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKL 287
+HS++ +DQK +F +PP +RK+++ATNIAETSIT++D+V+V D G HKE RY+ + K+
Sbjct: 704 VHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVVDSGLHKEERYDLKTKV 763
Query: 288 SSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQ 347
S + W+S+AN QRRGRAGR + G Y L+ R R EK++ P+QVPE+ R PL L LQ
Sbjct: 764 SCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPRSRLEKMV-PFQVPEILRTPLENLVLQ 822
Query: 348 IKLLSLGRIKI-FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVL 406
K+ + + FLSKA++ P +A+ A+ +L E+G ++ E LT LG LA + D
Sbjct: 823 AKIHMPEKTAVEFLSKAVDSPNIKAVDEAVILLQEIGVLDQREYLTTLGQRLAHISTDPR 882
Query: 407 IGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSND 466
+ K ++ IF CL P+L + + L+ + PF + V++ K ALL S+D
Sbjct: 883 LAKAIVLAAIFRCLHPLLVVVSCLT-RDPFSSSLQNRAEVDKVK-ALL---------SHD 931
Query: 467 SSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADI 526
S SDHL + A W+++L + + + + + L + + I + QF + +
Sbjct: 932 SG--SDHLAFVRAVAGWEEVLRWQDRTSRENYLEENLLYAPSLRFIHGLIKQFSENIYEA 989
Query: 527 GLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVA 586
L+ GK D + S N Y+ +VK +L AGLYPN+ QG
Sbjct: 990 FLV---------GKPSD-----CTLPSAQCNEYSEEEELVKGVLMAGLYPNLIQVRQG-- 1033
Query: 587 GAALSNLRKSSNSAAKAHPVWYDGRR-EVHIHPSSINSQLKSFEHPFLVFLEKVETN-KV 644
+ + K + V Y + + +H S+IN + +L + V++N V
Sbjct: 1034 -------KVTRQGKFKPNSVTYRTKSGNILLHKSTINREATRLRSRWLTYFMAVKSNGSV 1086
Query: 645 FLRDTTIVSPFSILLF-GGSINVQHQTGQVTI 675
F+RD++ V P ++LL G ++++ + TI
Sbjct: 1087 FVRDSSQVHPLAVLLLTDGDVHIRDDGRRATI 1118
Score = 93.2 bits (230), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
LQ + +L GV+HVIVDEVHER + DFLLI+LK L P L+++LMSAT D+
Sbjct: 544 LQSNPSLEGVSHVIVDEVHERDVNTDFLLILLKGL-----QRLNPALRLVLMSATGDNER 598
Query: 66 FSRYFGDCPVITAEGRTHPVTTYFLEDV 93
FSRYFG CPVI G +PV ++LED+
Sbjct: 599 FSRYFGGCPVIKVPGFMYPVKEHYLEDI 626
>sp|B8A4F4|TDRD9_DANRE Putative ATP-dependent RNA helicase TDRD9 OS=Danio rerio GN=tdrd9
PE=2 SV=1
Length = 1342
Score = 205 bits (521), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 162/494 (32%), Positives = 240/494 (48%), Gaps = 77/494 (15%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L K LT +H+ +DEVHERS DFLL+V++ LL S + +KVILMSAT++
Sbjct: 196 LVSSKTLTEYSHIFIDEVHERSEELDFLLLVVRKLLRSNSRY----VKVILMSATINCIE 251
Query: 66 FSRYFGD--------CPVITAEGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKS 117
F+ YFG V EG + V Y+L+++ + + LD
Sbjct: 252 FAEYFGSPIRNQMNPAYVFEVEGAPYAVEEYYLDELKTMLPVGVNLD------------- 298
Query: 118 GPVNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDL 177
L L D ++EE N S S+ E ++ +R +
Sbjct: 299 -----------LTLP---QDPYITEEMYNVAV--SLIQSFDEMEAKDHRRSEQT------ 336
Query: 178 LEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQ 237
H + G++LVFLPG+AEI + + L+ R + LHS+V +Q
Sbjct: 337 --GSTTHPER----GSVLVFLPGLAEIQYMKEALSKLVR----KRLQVYPLHSTVTLEEQ 386
Query: 238 KKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQ 297
VFL P RK+I++TNIAE+S+T+ DV YV D ++ + + + W S+
Sbjct: 387 NGVFLVPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNYRCLRITWASK 446
Query: 298 ANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIK 357
+ QRRGRAGRV G CY L TRH +E + + +PEM R PL L++KLL +G +
Sbjct: 447 TSCNQRRGRAGRVSKGFCYRLVTRHFWENEIPNFSIPEMLRSPLASTLLKVKLLDMGDPR 506
Query: 358 IFLSKALEPPKEEAITTAISVLYEVGAI--------EGDEELTPLGHHLAKLPVDVLIGK 409
LS AL PP I + L ++GA+ + D +LT LG LA+LPVD+ +GK
Sbjct: 507 SVLSTALTPPILGDIERTVLQLKQIGALSVQSNSQRQFDGDLTFLGRVLAQLPVDLQLGK 566
Query: 410 MMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSST 469
+++ G +FGCL L I+A LS KS F P ++ R+KL+ +
Sbjct: 567 LIVLGHVFGCLEECLIIAASLSLKSFFAMPSLQQLAGYRSKLSFAQN------------V 614
Query: 470 QSDHLVLMVAYKKW 483
SD + + A+K W
Sbjct: 615 PSDFIAYVNAFKAW 628
>sp|Q5RBD4|DHX35_PONAB Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35
PE=2 SV=1
Length = 720
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 233/479 (48%), Gaps = 75/479 (15%)
Query: 180 DLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSSDWLLALHSSVASV 235
+ V + +T G+G IL FL G E+ +L+++ A R G +L +++ + S
Sbjct: 263 ETVVKIHQTEGDGDILAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSF 322
Query: 236 DQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWI 295
+Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN + + +V +
Sbjct: 323 EQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPV 382
Query: 296 SQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGR 355
SQA+A QR GR GR + G CY LYT ++KL + VPEMQR L + LQ+K L +
Sbjct: 383 SQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQS-TVPEMQRSNLAPVILQLKALGIDN 441
Query: 356 IKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKLPVDVLIGKMMLFG 414
+ F + PP +++ A+ +LY +G ++ D LT PLG +A+ P++ + KM+L
Sbjct: 442 VLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLES 499
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHL 474
G FGC ILSI+A + ++ F+ P ++K R + + DHL
Sbjct: 500 GNFGCSQEILSIAAMMQIQNIFVVPPNQKSQAIRVHRKFAVE-------------EGDHL 546
Query: 475 VLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNK 534
++ Y+ + K Q+C ++FL+ + +R Q LL +P K
Sbjct: 547 TMLNVYEAFIK------HNKNSQWCQEHFLNYKGLVRAATVREQLKKLLVK---FQVPKK 597
Query: 535 NQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLR 594
+ G + +++ I+ +G + N A + A +R
Sbjct: 598 SSEG----------------------DPDPVLRCIV-SGFFANAARFH---STGAYRTIR 631
Query: 595 KSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
E+HIHP+S+ L + + P ++++ E ++T+K ++RD T +
Sbjct: 632 DD---------------HELHIHPASV---LYAEKPPRWVIYNEVIQTSKYYMRDVTAI 672
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 15/93 (16%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +++DE HER+L D + +LK + +K+ L++I+ SAT+D++ F
Sbjct: 164 DPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG-----DLRLIVASATLDADKFRD 218
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T GRT PV ++L+
Sbjct: 219 FFNQNETSDPARDTCVILTVGGRTFPVDIFYLQ 251
>sp|B4HLH4|SPNE_DROSE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
sechellia GN=spn-E PE=3 SV=1
Length = 1434
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 147/447 (32%), Positives = 215/447 (48%), Gaps = 62/447 (13%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L +K LT TH+++DEVHER DFLLIV++ LL S H +K+ILMSAT+D+
Sbjct: 223 LINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRH----VKIILMSATIDAKE 278
Query: 66 FSRYFGDC----PVITA-EGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPV 120
S YF PVIT GR H + + YR L S + + P
Sbjct: 279 LSDYFATTNSIPPVITTNHGRKHSIEKF----------YRDQLGSIIWNEEDVGDQHVPE 328
Query: 121 NNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLED 180
N+ G + V D++ + I Q+R + YD
Sbjct: 329 INKHGYRAAVKIIVIIDNMERKAAI--------------QSR----------LSYD---- 360
Query: 181 LVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
ET GA+L+FLPG+ EI + + + ++ S + +Q+ V
Sbjct: 361 ------ETLRYGAVLIFLPGIYEIDTMAENITCMLENDRNIKVLIVRCFSLMTPENQRDV 414
Query: 241 FLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANA 300
F PP RK+I+ATNIAE+SIT+ DV YV D K ++ SS+ W S+AN
Sbjct: 415 FNPPPPGFRKIILATNIAESSITVPDVSYVIDFCLTKVKVTDTASSFSSLRLTWASKANC 474
Query: 301 RQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFL 360
RQR GR GR++ G Y + +H Y++ M + +PEM R+PL L+ K+L++G L
Sbjct: 475 RQRAGRVGRLRSGRVYRMVNKHFYQREMAEFGIPEMLRLPLQNSVLKAKVLNMGSPMEIL 534
Query: 361 SKALEPPKEEAITTAISVLYEVGA----IEG-----DEELTPLGHHLAKLPVDVLIGKMM 411
+ AL PP I I +L EVGA ++G D +LT G +A+LP+D +++
Sbjct: 535 ALALSPPNLSDIQNTILLLKEVGALYLTVDGVYDALDGDLTYWGTIMARLPLDTRQSRLI 594
Query: 412 LFGGIFGCLSPILSISAFLSYKSPFIY 438
+ G IF L + I+A LS F +
Sbjct: 595 ILGYIFNMLEEAIIIAAGLSTNGLFAH 621
>sp|B4NBB0|SPNE_DROWI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
willistoni GN=spn-E PE=3 SV=1
Length = 1432
Score = 197 bits (500), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 217/454 (47%), Gaps = 77/454 (16%)
Query: 5 YLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSN 64
+L K LT TH+++DEVHER DFLLIV++ LL S H +KVILMSAT+DS
Sbjct: 222 FLINHKTLTHYTHIVLDEVHERDQEMDFLLIVVRRLLATNSRH----VKVILMSATIDSR 277
Query: 65 LFSRYF----GDCPVITA-EGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGP 119
F +YF G PVI A GR +P+ ++ + +
Sbjct: 278 EFVQYFATKNGIPPVINASHGRKYPLVKFYRDQL-------------------------- 311
Query: 120 VNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGS--YSEQTR-----QNLKRLNEDV 172
KN+ W +D P D GS YS + N++R E
Sbjct: 312 -------KNM---QWQEDQ--------PNPDEPGMGSHGYSAAIKILLVIDNMERRTEGQ 353
Query: 173 IDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSV 232
E+L G++L+FLPG+ EI + + + + ++ HS +
Sbjct: 354 SQRSYEENL--------KTGSVLIFLPGINEIDNMAESIDHVMQENPALKVSIIRCHSLM 405
Query: 233 ASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVE 292
Q+ VF PP RK+I+ TNIAE+SIT+ DV YV D K ++ SS+
Sbjct: 406 TPDSQRDVFASPPVGYRKIILTTNIAESSITVPDVSYVIDFCLAKVLVTDTATNFSSLRL 465
Query: 293 DWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLS 352
W S++N RQR GR GR++ G Y + + Y K M + VPEM R PL L+ K L+
Sbjct: 466 VWASKSNCRQRAGRVGRLRSGRVYRMVPKSFYMKHMLEFGVPEMLRSPLESSVLKAKELN 525
Query: 353 LGRIKIFLSKALEPPKEEAITTAISVLYEVGA---------IEGDEELTPLGHHLAKLPV 403
+G L+ AL PPK I I +L EVGA +E D +LTP G + +LP+
Sbjct: 526 MGPPIEMLALALSPPKLSDIRNTILLLKEVGALYPTVDGNYVELDGDLTPWGSIMTRLPL 585
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFI 437
D+ + +++L G +F CL + ++A LS + ++
Sbjct: 586 DIRLSRLVLLGYVFNCLDEAIVMAAGLSVRGLYL 619
>sp|Q9H5Z1|DHX35_HUMAN Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35
PE=1 SV=2
Length = 703
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 141/479 (29%), Positives = 233/479 (48%), Gaps = 75/479 (15%)
Query: 180 DLVCHVDETCGEGAILVFLPGVAEIH----ILLDRLAASYRFGGPSSDWLLALHSSVASV 235
+ V + +T G+G +L FL G E+ +L+++ A R G +L +++ + S
Sbjct: 263 ETVVKIHQTEGDGDVLAFLTGQEEVETVVSMLIEQARALARTGMKRHLRVLPMYAGLPSF 322
Query: 236 DQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWI 295
+Q KVF R +RKVI+ATN+AETSITI +VYV DCG K YN + + +V +
Sbjct: 323 EQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIECLVVVPV 382
Query: 296 SQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGR 355
SQA+A QR GR GR + G CY LYT ++KL + VPEMQR L + LQ+K L +
Sbjct: 383 SQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQS-TVPEMQRSNLAPVILQLKALGIDN 441
Query: 356 IKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELT-PLGHHLAKLPVDVLIGKMMLFG 414
+ F + PP +++ A+ +LY +G ++ D LT PLG +A+ P++ + KM+L
Sbjct: 442 VLRF--HFMSPPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLES 499
Query: 415 GIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHL 474
G FGC ILSI+A + ++ F+ P ++K + R + + DHL
Sbjct: 500 GNFGCSQEILSIAAMMQIQNIFVVPPNQKSHAIRVHRKFAVE-------------EGDHL 546
Query: 475 VLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNK 534
++ Y+ + K ++C ++FL+ + +R Q LL +P K
Sbjct: 547 TMLNIYEAFIK------HNKDSKWCQEHFLNYKGLVRAATVREQLKKLLVK---FQVPRK 597
Query: 535 NQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLR 594
+ G D D +V + +G + N A + A +R
Sbjct: 598 SSEG-----DPD------------------LVLRCIVSGFFANAARFH---STGAYRTIR 631
Query: 595 KSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIV 652
E+HIHP+S+ L + + P ++++ E ++T+K ++RD T +
Sbjct: 632 DD---------------HELHIHPASV---LYAEKPPRWVIYNEVIQTSKYYMRDVTAI 672
Score = 53.5 bits (127), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 15/93 (16%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D LT + +++DE HER+L D + +LK + +K+ L++I+ SAT+D++ F
Sbjct: 164 DPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKRG-----DLRLIVASATLDADKFRD 218
Query: 69 YFGD----------CPVITAEGRTHPVTTYFLE 91
+F C ++T EGRT PV ++L+
Sbjct: 219 FFNQNETSDPARDTCVILTVEGRTFPVDIFYLQ 251
>sp|B0XDC4|SPNE_CULQU Probable ATP-dependent RNA helicase spindle-E OS=Culex
quinquefasciatus GN=spn-E PE=3 SV=1
Length = 1396
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 155/501 (30%), Positives = 238/501 (47%), Gaps = 92/501 (18%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L K + THVI+DEVHER + DFLLIV++ LL S K KVILMSAT+D+
Sbjct: 165 LINSKTMATYTHVILDEVHEREVDMDFLLIVVRRLLSTNSK----KTKVILMSATIDAKG 220
Query: 66 FSRYFG--------DCPVITAE-GRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSK 116
FS YF PVI+ E R H V ++ +D+ E + +D YEA
Sbjct: 221 FSEYFKIPKKSGYLSAPVISVERPRLHVVQEFYFDDL-EKLKVDFQID------YEAPGI 273
Query: 117 SGPVNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYD 176
S + N K +V D L +E+ D ++Y
Sbjct: 274 SEQMYNIAAKLVVVC-----DHLKGQEF-------------------------GDSLEY- 302
Query: 177 LLEDLVCHVDETCGEGAILVFLPGVAEIHIL---LDRLAASYRFGGPSSDWL-LALHSSV 232
+ +I++FLPG+ EI + L++L AS + + L + LHS++
Sbjct: 303 --------------KPSIIIFLPGINEIEKMEGALEKLIASIQNAAQRPNLLIMKLHSTL 348
Query: 233 ASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVE 292
+ DQ VF +P RKVI++TNIAE+SIT+ D+ +V D + ++ S++
Sbjct: 349 PADDQTAVFRKPGPNQRKVILSTNIAESSITVPDIKFVIDFCLQRILVTDTLTNFSTLRT 408
Query: 293 DWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLS 352
+W S++N QR GRAGR+ G Y L R +E M PE+ R PL + L+ KLL
Sbjct: 409 EWASKSNCIQRAGRAGRLMSGRVYRLVDRRFFENNMDVSTSPEILRCPLETVVLKAKLLE 468
Query: 353 LGRIKIFLSKALEPPKEEAITTAISVLYEVGAI---------EGDEELTPLGHHLAKLPV 403
+G L+ A+ PP + I I +L EVGA+ + D +LT LG ++KLP+
Sbjct: 469 MGTPPSILALAMAPPNLDDIRNTILLLKEVGAMLRTVKGNYDQLDGDLTYLGRIMSKLPL 528
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
D+ I K+++ G IF + ++I A ++ K+ F+ K ++ A
Sbjct: 529 DIRISKLIMLGYIFSVMEEAVTIGAGMNVKNIFLNQNSVKTYSQKMYWA----------- 577
Query: 464 SNDSSTQSDHLVLMVAYKKWQ 484
+ SD + ++ AY W+
Sbjct: 578 ---DGSGSDAIAILNAYTAWK 595
>sp|B4JT42|SPNE_DROGR Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
grimshawi GN=spn-E PE=3 SV=1
Length = 1434
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 214/444 (48%), Gaps = 68/444 (15%)
Query: 10 KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 69
K LT TH+++DEVH+R DFLLIV++ LL S H +KVILMSAT+D+ F +Y
Sbjct: 229 KTLTHYTHIVLDEVHDRDQDMDFLLIVVRRLLALNSRH----VKVILMSATIDTREFCKY 284
Query: 70 FGDC----PVITA-EGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
F C PV+ A GR +P+ Y+ D ++IN+ K+ P
Sbjct: 285 FASCKSMPPVVAASHGRKYPLVKYY-RDQLKNINW----------------KTEPQQREP 327
Query: 125 GKKNLVLSGWGD--DSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLV 182
G + G+ D LL + + + SY E R
Sbjct: 328 G---ITHEGYRDAVKILLVIDNMERKAEGQSEQSYEEAKRT------------------- 365
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFL 242
G++L+FLPGV EI + + + ++ HS ++S Q+ VF
Sbjct: 366 ---------GSVLIFLPGVNEIDTMAEHIEHVMNESPNIKITIVRCHSLMSSDSQEDVFQ 416
Query: 243 RPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQ 302
P RKVI+ TNIAE+SIT+ DV YV D K ++ S + +W S+ N RQ
Sbjct: 417 PPLSGHRKVILTTNIAESSITVTDVSYVIDFCLAKVMHIDTASNFSCLCLEWASKVNCRQ 476
Query: 303 RRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
R GR GR + G Y + T+ Y + M+ + +PEM R PL L+ K L +G L+
Sbjct: 477 RAGRVGRTRSGRVYRMVTKAFYMEEMQEFGIPEMLRSPLQSSVLKAKELDMGGPSEILAL 536
Query: 363 ALEPPKEEAITTAISVLYEVGA----IEG-----DEELTPLGHHLAKLPVDVLIGKMMLF 413
A+ PP I + +L EVGA ++G D +LT G +++ P+DV + ++++
Sbjct: 537 AMSPPNLTDIHNTVLLLKEVGALYTTVDGVYEQLDGDLTYWGTIMSRFPLDVRLSRLIIL 596
Query: 414 GGIFGCLSPILSISAFLSYKSPFI 437
G IF CL + I+A +S +S ++
Sbjct: 597 GYIFNCLDEAIIIAAGMSVRSLYL 620
>sp|Q14562|DHX8_HUMAN ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1
Length = 1220
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 143/494 (28%), Positives = 233/494 (47%), Gaps = 74/494 (14%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL--LAL 228
D +D L+ + H+ E G+ ILVFL G EI + L + GP L L +
Sbjct: 755 DYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPV 812
Query: 229 HSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLS 288
+S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS+ +
Sbjct: 813 YSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGID 872
Query: 289 SMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQI 348
+V ISQA A+QR GRAGR PG CY LYT Y M VPE+QR L L +
Sbjct: 873 QLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSL 932
Query: 349 KLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIG 408
K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P++ ++
Sbjct: 933 KAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLC 990
Query: 409 KMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSS 468
KM++ GC +L+I + LS ++ F PKD++ ++ K
Sbjct: 991 KMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKF-------------HQ 1037
Query: 469 TQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGL 528
T+ DHL L+ Y W + K + +C + F+ + + +D+R Q +G+
Sbjct: 1038 TEGDHLTLLAVYNSW------KNNKFSNPWCYENFIQARSLRRAQDIRKQM------LGI 1085
Query: 529 INLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSI-VKAILCAGLYPNVAATEQGVAG 587
+ D ++ + S++ V+ +C+G + N A +
Sbjct: 1086 M---------------------DRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGY 1124
Query: 588 AALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLR 647
L + ++ V+IHPSS L + + ++V+ E V T K ++R
Sbjct: 1125 RTLID------------------QQVVYIHPSSA---LFNRQPEWVVYHELVLTTKEYMR 1163
Query: 648 DTTIVSPFSILLFG 661
+ T + P ++ F
Sbjct: 1164 EVTTIDPRWLVEFA 1177
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 673 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 727
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 728 YFYEAPIFTIPGRTYPVEILYTKE 751
>sp|A2A4P0|DHX8_MOUSE ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1
Length = 1244
Score = 192 bits (489), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 144/499 (28%), Positives = 234/499 (46%), Gaps = 74/499 (14%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K D +D L+ + H+ E G+ ILVFL G EI + L + GP L
Sbjct: 774 KEPETDYLDASLITVMQIHLTEPPGD--ILVFLTGQEEIDTACEILYERMKSLGPDVPEL 831
Query: 226 --LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
L ++S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K+ YNS
Sbjct: 832 IILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNS 891
Query: 284 QKKLSSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + +V ISQA A+QR GRAGR PG CY LYT Y M VPE+QR L
Sbjct: 892 KTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLAS 951
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++ P E + TA+ LY +GA++ + LT LG +A+ P+
Sbjct: 952 TVLSLKAMGINDLLSF--DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPL 1009
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ ++ KM++ GC +L+I + LS ++ F PKD++ ++ K
Sbjct: 1010 EPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKF---------- 1059
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
T+ DHL L+ Y W + K + +C + F+ + + +D+R Q
Sbjct: 1060 ---HQTEGDHLTLLAVYNSW------KNNKFSNPWCYENFIQARSLRRAQDIRKQM---- 1106
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSI-VKAILCAGLYPNVAATE 582
+G++ D ++ + S++ V+ +C+G + N A +
Sbjct: 1107 --LGIM---------------------DRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKD 1143
Query: 583 QGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETN 642
L + ++ V+IHPSS L + + ++V+ E V T
Sbjct: 1144 PQEGYRTLID------------------QQVVYIHPSSA---LFNRQPEWVVYHELVLTT 1182
Query: 643 KVFLRDTTIVSPFSILLFG 661
K ++R+ T + P ++ F
Sbjct: 1183 KEYMREVTTIDPRWLVEFA 1201
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 52/84 (61%), Gaps = 5/84 (5%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +LT +++DE HER++ D L +LK ++K+ +K+I+ SAT+D+ FS+
Sbjct: 697 DPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQ-----DMKLIVTSATLDAVKFSQ 751
Query: 69 YFGDCPVITAEGRTHPVTTYFLED 92
YF + P+ T GRT+PV + ++
Sbjct: 752 YFYEAPIFTIPGRTYPVEILYTKE 775
>sp|Q296Q5|SPNE_DROPS Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
pseudoobscura pseudoobscura GN=spn-E PE=3 SV=2
Length = 1433
Score = 191 bits (485), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 146/448 (32%), Positives = 217/448 (48%), Gaps = 68/448 (15%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L +K LT TH+++DEVHER DFLLIV++ LL S H +KVILMSAT++
Sbjct: 225 LVNNKTLTHYTHIVLDEVHERGQEMDFLLIVIRRLLATNSRH----VKVILMSATINPRE 280
Query: 66 FSRYFGD----CPVITAE-GRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSK--SG 118
S YF + PVI A GR V Y YR D I +E + +
Sbjct: 281 LSDYFANERSAPPVIDASYGRNFTVEKY----------YR---DQLQTINWEGHQEDINS 327
Query: 119 PVNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLL 178
P + G ++ + + D++ E S SY++ R
Sbjct: 328 PGITQEGYRSAIKTILVIDNMERNER-------STGKSYNQSLR---------------- 364
Query: 179 EDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQK 238
EG+IL+FLPGV EI+ + D L ++ HS ++S DQ+
Sbjct: 365 ------------EGSILIFLPGVGEINNMSDMLKDMANHDSIMKFNMVRCHSLMSSDDQR 412
Query: 239 KVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQA 298
++F P RK+I+ATN+AE+SIT+ DV Y+ D K ++ SS+ W S+
Sbjct: 413 EIFQPSPPGYRKIIMATNVAESSITVPDVSYIIDFCLEKVLFTDTFTNFSSLRLVWASKT 472
Query: 299 NARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKI 358
N RQR GR GR++ G Y + T+ Y++ + Y VPEM R PL L+ K L +G
Sbjct: 473 NCRQRAGRVGRLRNGRVYRMVTKSFYQRELSEYSVPEMLRSPLQNCVLKAKELKMGTPVE 532
Query: 359 FLSKALEPPKEEAITTAISVLYEVGA----IEG-----DEELTPLGHHLAKLPVDVLIGK 409
L+ AL PP I I +L EVGA ++G D ++T G ++KLP+D + +
Sbjct: 533 MLALALSPPNLSDICNTILLLKEVGALFPTVDGTYDPCDGDITYWGTIMSKLPLDTRLSR 592
Query: 410 MMLFGGIFGCLSPILSISAFLSYKSPFI 437
+++ G IF L + I+A L+ + F+
Sbjct: 593 LIILGYIFNLLDEAIIIAAGLTVRGIFV 620
>sp|Q9VF26|SPNE_DROME Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
melanogaster GN=spn-E PE=2 SV=1
Length = 1434
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 145/453 (32%), Positives = 213/453 (47%), Gaps = 62/453 (13%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L +K LT TH+++DEVHER DFLLIV++ LL S H +K+ILMSAT+D+
Sbjct: 223 LINNKTLTHYTHIVLDEVHERDQNMDFLLIVVRRLLATNSRH----VKIILMSATIDAKE 278
Query: 66 FSRYFGDC----PVITAEGR-THPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPV 120
S YF PVIT R H + + YR L S + + P
Sbjct: 279 LSDYFTTTNSIPPVITTNHRRKHSIEKF----------YRDQLGSIIWNEEDVGHQQVPE 328
Query: 121 NNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLED 180
N+ G + V D++ + I Q+RQ+
Sbjct: 329 INKHGYRAAVKIIVIIDNMERKAAI--------------QSRQSY--------------- 359
Query: 181 LVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKV 240
DE GA+L+FLPG+ EI + + L ++ S + +Q+ V
Sbjct: 360 -----DEALRYGAVLIFLPGIYEIDTMAENLTCMLENDPNIKVSIVRCFSLMTPENQRDV 414
Query: 241 FLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANA 300
F PP RK+I+ TNIAE+SIT+ DV YV D K ++ SS+ W S+AN
Sbjct: 415 FNPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLAKVKVTDTASSFSSLRLTWASKANC 474
Query: 301 RQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFL 360
RQR GR GR++ G Y + +H Y++ M + +PEM R+PL L+ K+L++G L
Sbjct: 475 RQRAGRVGRLRSGRVYRMVNKHFYQREMPEFGIPEMLRLPLQNSVLKAKVLNMGSPVEIL 534
Query: 361 SKALEPPKEEAITTAISVLYEVGA----IEG-----DEELTPLGHHLAKLPVDVLIGKMM 411
+ AL PP I I +L EVGA ++G D +LT G +++LP+D +++
Sbjct: 535 ALALSPPNLSDIHNTILLLKEVGALYLTVDGIYDPLDGDLTYWGTIMSRLPLDTRQSRLI 594
Query: 412 LFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQ 444
+ G IF L + I+A LS F + Q
Sbjct: 595 ILGYIFNMLEEAIIIAAGLSTPGLFAHEGGRSQ 627
>sp|Q09530|MOG5_CAEEL Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5
OS=Caenorhabditis elegans GN=mog-5 PE=1 SV=1
Length = 1200
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 139/476 (29%), Positives = 224/476 (47%), Gaps = 72/476 (15%)
Query: 192 GAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL--LALHSSVASVDQKKVFLRPPEKIR 249
G +LVFL G EI + L + GP L L ++ ++ S Q ++F P R
Sbjct: 749 GDVLVFLTGQEEIDTSCEVLYERMKSMGPDVPELIILPVYGALPSEMQTRIFDPAPAGKR 808
Query: 250 KVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQRRGRAGR 309
KV+IATNIAETS+TID + YV D G K+ YN + + S+V ISQA A+QR GRAGR
Sbjct: 809 KVVIATNIAETSLTIDGIFYVVDPGFVKQKIYNPKSGMDSLVVTPISQAAAKQRSGRAGR 868
Query: 310 VKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKALEPPKE 369
PG CY LYT + M P VPE+QR L LQ+K + + + F ++ P
Sbjct: 869 TGPGKCYRLYTERAFRDEMLPTPVPEIQRTNLASTLLQLKAMGINNLIDF--DFMDAPPL 926
Query: 370 EAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFGCLSPILSISAF 429
+++ TA++ L+ + A++GD LT LG +A+ P++ + K+++ GC +L+I A
Sbjct: 927 DSMITALNTLHTLSALDGDGLLTKLGRRMAEFPLEPSLSKLLIMSVDLGCSEEVLTIVAM 986
Query: 430 LSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMVAYKKWQKILLK 489
L+ ++ F PK+++ + ++ K + DHL L+ Y W
Sbjct: 987 LNVQNIFYRPKEKQDHADQKKAKF-------------HQPEGDHLTLLAVYNSW------ 1027
Query: 490 RGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTGGKKKDDLDSWF 549
+ +Q +C + F+ M +D+R Q ++ L+
Sbjct: 1028 KNHHFSQPWCFENFIQVRSMKRAQDIRKQLLGIMDRHKLL-------------------- 1067
Query: 550 SDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSNSAAKAHPVWYD 609
M + + S + KAI C+G + N A + + + D
Sbjct: 1068 -----MVSCGRDVSRVQKAI-CSGFFRNAAKRD-----------------PQEGYRTLTD 1104
Query: 610 GRREVHIHPSSINSQLKSFEHP-FLVFLEKVETNKVFLRDTTIVSPFSILLFGGSI 664
G+ V+IHPSS Q + P ++V+ E V T K ++R+ T + P ++ F S
Sbjct: 1105 GQN-VYIHPSSACFQ----QQPEWVVYHELVMTTKEYMREVTAIDPKWLVEFAPSF 1155
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D +L+G + +++DE HER++ D L +LK +A P+LK+I+ SAT+DS FS
Sbjct: 648 DPDLSGYSLIMLDEAHERTIHTDVLFGLLK-----AAARKRPELKLIITSATLDSVKFSE 702
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF + P+ T GRT PV +
Sbjct: 703 YFLEAPIFTIPGRTFPVEILY 723
>sp|Q54F05|DHX8_DICDI ATP-dependent RNA helicase dhx8 OS=Dictyostelium discoideum GN=dhx8
PE=3 SV=1
Length = 1160
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 143/489 (29%), Positives = 234/489 (47%), Gaps = 78/489 (15%)
Query: 171 DVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEI----HILLDRLAASYRFGGPSSDWL- 225
D +D L+ + H+ E G+ IL+FL G EI IL +R+ + G D +
Sbjct: 698 DYLDASLITVMQIHLSEPPGD--ILLFLTGQEEIDAACQILYERMKS---LGSNVPDLII 752
Query: 226 LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQK 285
L ++S++ S Q K+F P RKV+IATNIAETS+TID + YV D G K+ +N +
Sbjct: 753 LPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETSLTIDGIYYVIDPGFSKQKCFNPKN 812
Query: 286 KLSSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELC 345
+ S+V ISQA ARQR GRAGR PG CY LYT ++ M +PE+QR L
Sbjct: 813 GMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTESAFKNEMLASSIPEIQRTNLGNTV 872
Query: 346 LQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDV 405
L +K + + + F ++PP + + +A+ LY +GA++ + LT LG +A+ P+D
Sbjct: 873 LTMKAMGINDLLNF--DFMDPPPVQTLVSAMEQLYSLGALDEEGLLTRLGRKMAEFPLDP 930
Query: 406 LIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSN 465
+ KM++ GC IL++ A LS ++ F PK+++ ++ K
Sbjct: 931 QLSKMLIASVDLGCSDEILTVVAMLSVQNVFYRPKEKQALADQKKAKFF----------- 979
Query: 466 DSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLAD 525
+ DHL L+ Y+ W + +K + +C + F+ + + +D+R Q T++
Sbjct: 980 --QPEGDHLTLLNVYESW------KNSKFSNPWCFENFVQARSLRRAQDVRKQLITIMDR 1031
Query: 526 IGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGV 585
L + + N++ I KAI C+G + N +
Sbjct: 1032 YKL-------------------------DIISAGRNYTKIQKAI-CSGFFANAS------ 1059
Query: 586 AGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVF 645
+K N K +G + V+IHPSS L + ++++ E V T K +
Sbjct: 1060 --------KKDPNEGYK---TLVEG-QPVYIHPSST---LFNRNPDWVIYHELVMTTKEY 1104
Query: 646 LRDTTIVSP 654
+R+ + P
Sbjct: 1105 MREVCTIDP 1113
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Query: 4 CYLQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDS 63
C L D NL+ + +I+DE HER++ D L +LK L+++ P+LKV++ SAT+++
Sbjct: 613 CLL--DPNLSAYSVIILDEAHERTISTDVLFGLLKQALQRR-----PELKVLITSATLEA 665
Query: 64 NLFSRYFGDCPVITAEGRTHPVTTYFLED 92
FS+YF + + GRT PV + +D
Sbjct: 666 EKFSKYFMNAQLFIIPGRTFPVDIRYTKD 694
>sp|B3P3W1|SPNE_DROER Probable ATP-dependent RNA helicase spindle-E OS=Drosophila erecta
GN=spn-E PE=3 SV=1
Length = 1432
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 144/448 (32%), Positives = 217/448 (48%), Gaps = 67/448 (14%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L K LT TH+++DEVHER DFLLIV++ LL S H +K+ILMSAT+D+
Sbjct: 222 LINKKTLTHYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRH----VKIILMSATIDARE 277
Query: 66 FSRYFGDC----PVITA-EGRTHPVTTYFLEDVYESINYRLALDSAAAIRY--EASSKSG 118
+ YF PVITA GR H + + YR D +IR+ E +
Sbjct: 278 LADYFTTTNSVPPVITASHGRKHAIEKF----------YR---DQMGSIRWKEEEDDQLV 324
Query: 119 PVNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLL 178
P N G + V D++ E I Q+R + YD
Sbjct: 325 PQINDHGYRAAVKIIMVIDNMEREAAI--------------QSR----------LSYD-- 358
Query: 179 EDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQK 238
E GA+L+FLPG+ EI + + + + + +++ S + +Q+
Sbjct: 359 --------EALRYGAVLIFLPGIDEIDTMAENITSMLQSDRNIKVFIVRCFSLMTPENQR 410
Query: 239 KVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQA 298
VF PP RK+I+ TNIAE+SIT+ DV YV D K ++ SS+ W S+A
Sbjct: 411 DVFHPPPPGFRKIILTTNIAESSITVPDVSYVIDFCLTKVLVTDTATSFSSLRLTWASKA 470
Query: 299 NARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKI 358
N RQR GR GR++ G Y + + Y++ M + +PEM RMPL L+ K L +G
Sbjct: 471 NCRQRAGRVGRLRSGRVYRMVNKSFYQREMAEFGIPEMLRMPLQNSVLRAKELEMGSPIE 530
Query: 359 FLSKALEPPKEEAITTAISVLYEVGA----IEG-----DEELTPLGHHLAKLPVDVLIGK 409
L+ AL PP I I +L EVGA ++G D ++T G +++LP+D + +
Sbjct: 531 ILALALSPPNLSDIQNTILLLKEVGALFLTVDGVYNAMDGDITYWGTIMSRLPLDTRLSR 590
Query: 410 MMLFGGIFGCLSPILSISAFLSYKSPFI 437
+++ G +F L + I+A LS + ++
Sbjct: 591 LIILGYVFNLLEEAIIIAAGLSMRGLYV 618
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 190 bits (483), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 143/491 (29%), Positives = 235/491 (47%), Gaps = 72/491 (14%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K+ D +D L+ L H+ E EG ILVFL G EI L + G + L
Sbjct: 700 KQPETDYLDAALITVLQIHLTEP--EGDILVFLTGQEEIDSACQSLYERMKGLGKNVPEL 757
Query: 226 --LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
L ++S++ S Q ++F PP RKV++ATNIAE S+TID + YV D G K+N YN
Sbjct: 758 IILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNP 817
Query: 284 QKKLSSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
++ L S+V ISQA+A+QR GRAGR PG CY LYT Y M P +PE+QR+ L
Sbjct: 818 KQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMPPTSIPEIQRINLGM 877
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++PP+ +A+ +A+ LY +GA++ + LT LG +A+ P+
Sbjct: 878 TTLTMKAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPL 935
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ + KM+L GC IL++ A + + F P++++ ++ +
Sbjct: 936 EPPLSKMLLASVDLGCSDEILTMIAMIQTGNIFYRPREKQAQADQKRAKFF--------- 986
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
+ DHL L+ Y+ W + + +C + F+ S + +D+R Q +++
Sbjct: 987 ----QPEGDHLTLLAVYEAW------KAKNFSGPWCFENFIQSRSLRRAQDVRKQLLSIM 1036
Query: 524 ADIGLINLPNKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQ 583
L + T GK N + I KAI AG + +
Sbjct: 1037 DKYKLDVV-----TAGK--------------------NFTKIRKAI-TAGFFFH------ 1064
Query: 584 GVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNK 643
A + ++ + + PV+ IHPSS L + ++++ + V T K
Sbjct: 1065 ----GARKDPQEGYRTLVENQPVY--------IHPSSA---LFQRQPDWVIYHDLVMTTK 1109
Query: 644 VFLRDTTIVSP 654
++R+ T++ P
Sbjct: 1110 EYMREVTVIDP 1120
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 51/81 (62%), Gaps = 5/81 (6%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D+NL+ + +++DE HER++ D L +LK L++++ L++I+ SAT+D+ FS
Sbjct: 623 DENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRL-----DLRLIVTSATLDAEKFSG 677
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF +C + T GRT PV +
Sbjct: 678 YFFNCNIFTIPGRTFPVEILY 698
>sp|B3M383|SPNE_DROAN Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
ananassae GN=spn-E PE=3 SV=1
Length = 1429
Score = 189 bits (481), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 167/585 (28%), Positives = 265/585 (45%), Gaps = 94/585 (16%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+K LT TH+++DEVHER DFLLIV++ LL S H +KVILMSAT+D+ F
Sbjct: 222 NKTLTHYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRH----VKVILMSATIDTREFCD 277
Query: 69 YFGD----CPVITA-EGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNR 123
YF PVI+A GR H + ++ D SIN++ D R + V
Sbjct: 278 YFSTKVSVPPVISASHGRKHSIEKFY-RDQLGSINWKDDPDDGYQARIPDEAYKAAV--- 333
Query: 124 RGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVC 183
K LV+ + + SEQ+
Sbjct: 334 --KIILVVDNMERQA----------------ANQSEQS---------------------- 353
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVD-QKKVFL 242
D+ +GA+L+FLPG+ EI + + L + PS + S+ + D Q+ VF
Sbjct: 354 -YDDAKSQGAVLIFLPGIYEIDNMAESLGNMTK-EEPSMKLFIVRCFSLMTPDAQRDVFS 411
Query: 243 RPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQ 302
PP RK+I+ATNIAE+SIT+ DV YV D K ++ SS+ W S+AN RQ
Sbjct: 412 PPPSGFRKIILATNIAESSITVPDVSYVIDFCLTKVLVTDTATNFSSLRLTWASKANCRQ 471
Query: 303 RRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
R GR GR++ G Y + + Y+ M + VPEM R+PL L+ KLL + L+
Sbjct: 472 RAGRVGRLRSGRVYRMVHKLFYKTNMTEFGVPEMLRLPLQNSVLKAKLLDIAPPIEMLAL 531
Query: 363 ALEPPKEEAITTAISVLYEVGAI---------EGDEELTPLGHHLAKLPVDVLIGKMMLF 413
AL PP I I +L EVGA+ E D ++T G +++LP+D + ++++
Sbjct: 532 ALSPPNLSDIQNTILLLKEVGALFPTVDGEYCEVDGDITFWGIIMSRLPLDTRLSRLIIL 591
Query: 414 GGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDH 473
G +F L + I+A LS + + E + L +D D S SD
Sbjct: 592 GYVFNLLEEAIVIAAGLSMRG---------LSTEAGRGRLTSDAYWMNYVFADGSG-SDL 641
Query: 474 LVLMVAYKKWQKILLK-RGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLP 532
+ + Y+ ++ ++ ++A+ + +Y +S + + + + + + +G+I+
Sbjct: 642 VAIWRIYRTYENMVANGMHQESAEPWARRYHVSLRALKEMHLLVQELKSRCSQLGMISF- 700
Query: 533 NKNQTGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPN 577
N + DDL+ + ++K I+ YPN
Sbjct: 701 --NLSSSDMPDDLEK---------------AILLKVIIAGAFYPN 728
>sp|B4GEU5|SPNE_DROPE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
persimilis GN=spn-E PE=3 SV=1
Length = 1434
Score = 188 bits (477), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 143/448 (31%), Positives = 216/448 (48%), Gaps = 68/448 (15%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L +K LT TH+++DEVHER DFLLIV++ LL S H +KVILMSAT++
Sbjct: 226 LVNNKTLTHYTHIVLDEVHERGQEMDFLLIVIRRLLATNSRH----VKVILMSATINPRE 281
Query: 66 FSRYFGD----CPVITAE-GRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSK--SG 118
S YF + PVI A GR V Y YR D +I +E + +
Sbjct: 282 LSDYFANESSAPPVIAASYGRNFTVEKY----------YR---DQLQSINWEGHQEDINS 328
Query: 119 PVNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLL 178
P + G ++ + + D++ E SY++ R
Sbjct: 329 PGITQEGYRSAIKTILVIDNMERNER-------GTGKSYNQSLR---------------- 365
Query: 179 EDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQK 238
EG+IL+FLPGV EI+ + D L ++ HS + S DQ+
Sbjct: 366 ------------EGSILIFLPGVGEINNMSDMLKDMANHDPIMKFNMVRCHSLMTSEDQR 413
Query: 239 KVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQA 298
++F P RK+I+ATN+AE+SIT+ DV Y+ D K ++ SS+ W S+
Sbjct: 414 EIFQPSPPGYRKIIMATNVAESSITVPDVSYIIDFCLEKVLVTDTSTNFSSLRLAWASKT 473
Query: 299 NARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKI 358
N RQR GR GR++ G Y + T+ Y++ + Y VPEM R PL L+ K L +G
Sbjct: 474 NCRQRAGRVGRLRNGRVYRMVTKSFYQRELSEYSVPEMLRSPLQNCVLKAKELKMGTPVE 533
Query: 359 FLSKALEPPKEEAITTAISVLYEVGAI----EG-----DEELTPLGHHLAKLPVDVLIGK 409
L+ AL PP I I +L EVGA+ +G D ++T G ++KLP+D + +
Sbjct: 534 MLALALSPPNLSDICNTILMLKEVGALFPTMDGTYDPRDGDITYWGTIMSKLPLDTHLSR 593
Query: 410 MMLFGGIFGCLSPILSISAFLSYKSPFI 437
+++ G +F + + I+A L+ + +I
Sbjct: 594 LIILGYVFNLVDEAIIIAAGLTVRGIYI 621
>sp|O42643|PRP22_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=prp22 PE=1 SV=1
Length = 1168
Score = 185 bits (469), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 138/497 (27%), Positives = 235/497 (47%), Gaps = 83/497 (16%)
Query: 166 KRLNEDVIDYDLLEDLVCHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWL 225
K+ D +D L+ + H+ E G G ILVFL G EI + L + G S L
Sbjct: 696 KQPEADYLDAALMTVMQIHLSE--GPGDILVFLTGQEEIDTSCEILYERSKMLGDSIPEL 753
Query: 226 --LALHSSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNS 283
L ++S++ S Q ++F P RKV+IATNIAETS+TID + YV D G K++ ++
Sbjct: 754 VILPVYSALPSEIQSRIFEPAPPGGRKVVIATNIAETSLTIDGIYYVVDPGFVKQSCFDP 813
Query: 284 QKKLSSMVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVE 343
+ + S++ ISQA ARQR GRAGR PG CY LYT Y M P +PE+QR L
Sbjct: 814 KLGMDSLIVTPISQAQARQRSGRAGRTGPGKCYRLYTESAYRNEMLPSPIPEIQRQNLSH 873
Query: 344 LCLQIKLLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPV 403
L +K + + + F ++PP + + A+ LY + A++ + LTPLG +A P+
Sbjct: 874 TILMLKAMGINDLLNF--DFMDPPPAQTMIAALQNLYALSALDDEGLLTPLGRKMADFPM 931
Query: 404 DVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSD 463
+ + K+++ GC +LSI A LS + + P++++Q +R +
Sbjct: 932 EPQLSKVLITSVELGCSEEMLSIIAMLSVPNIWSRPREKQQEADRQRAQF---------- 981
Query: 464 SNDSSTQSDHLVLMVAYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLL 523
++ +SDHL L+ Y W+ + + +C ++++ + M D+R Q
Sbjct: 982 ---ANPESDHLTLLNVYTTWKM------NRCSDNWCYEHYIQARGMRRAEDVRKQ----- 1027
Query: 524 ADIGLINLPNKNQ----TGGKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVA 579
LI L ++ + + G+K++ ++ LC+G + NVA
Sbjct: 1028 ----LIRLMDRYRHPVVSCGRKRE---------------------LILRALCSGYFTNVA 1062
Query: 580 A--TEQGVAGAALSNLRKSSNSAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLE 637
+ +G + N V++HPS + L ++++ E
Sbjct: 1063 KRDSHEGCYKTIVENA-------------------PVYMHPSGV---LFGKAAEWVIYHE 1100
Query: 638 KVETNKVFLRDTTIVSP 654
++T+K ++ + V+P
Sbjct: 1101 LIQTSKEYMHTVSTVNP 1117
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D L+ + +I+DE HER++ D L +LK + K+ P LK+I+ SAT+D+ FS
Sbjct: 619 DPLLSKYSVIILDEAHERTVATDVLFGLLKGTVLKR-----PDLKLIVTSATLDAERFSS 673
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF CP+ T GR++PV +
Sbjct: 674 YFYKCPIFTIPGRSYPVEIMY 694
>sp|Q16JS8|SPNE_AEDAE Probable ATP-dependent RNA helicase spindle-E OS=Aedes aegypti
GN=spn-E PE=3 SV=1
Length = 1374
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 149/457 (32%), Positives = 221/457 (48%), Gaps = 83/457 (18%)
Query: 6 LQGDKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNL 65
L K + THVI+DE+HER + DFLLIV++ L A ++ K KVILMSAT+DS
Sbjct: 143 LINSKTMANYTHVILDEIHEREVDMDFLLIVVRRFL----ATNSSKTKVILMSATIDSKA 198
Query: 66 FSRYFGD--------CPVITAE-GRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSK 116
F+ YF P+I+ + R + V ++ +D+ +L LD AI YE
Sbjct: 199 FAEYFKTPKKVGYLTAPIISVDRPRLYEVKEFYYDDLD-----KLRLD--FAIDYENPGI 251
Query: 117 SGPVNNRRGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYD 176
S + K LV D L+ + E+ ++Y
Sbjct: 252 SSHMYTVAAKLVLVC-----DRLIENMH------------------------GEERMEY- 281
Query: 177 LLEDLVCHVDETCGEGAILVFLPGVAEI----HILLDRLAASYRFGGPSSDWLL---ALH 229
+ +L+FLPG+ EI H+L + L R P L LH
Sbjct: 282 --------------KPTVLIFLPGINEIDRMDHVLRETLT---RIVNPKEKPNLDIHRLH 324
Query: 230 SSVASVDQKKVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSS 289
S + + +Q KVF +P RKVI++TNIAE+SIT+ DV ++ D + ++ S+
Sbjct: 325 SILPADEQVKVFRKPAPGQRKVILSTNIAESSITVPDVKFIIDFCLQRVLFTDTTTNFST 384
Query: 290 MVEDWISQANARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIK 349
+ +W SQAN QR+GRAGRV G Y L R YE MR PE+ R PL + L+ K
Sbjct: 385 LRTEWASQANCIQRQGRAGRVMDGRVYRLVDRRFYENQMRFSTSPEILRCPLENVILKAK 444
Query: 350 LLSLGRIKIFLSKALEPPKEEAITTAISVLYEVGAI---------EGDEELTPLGHHLAK 400
LL +G L+ A+ PP I + L E+GA+ + D +LT +G +AK
Sbjct: 445 LLEMGPPHSILALAMNPPDLSDIRNTVLQLKELGALVQTVKGNYEQLDGDLTYMGRIMAK 504
Query: 401 LPVDVLIGKMMLFGGIFGCLSPILSISAFLSYKSPFI 437
LP+D+ I K+++ G IF L + I+A ++ K+ F+
Sbjct: 505 LPLDLRISKLIILGYIFSVLEESIIIAAGMNEKNIFL 541
>sp|B4PRJ9|SPNE_DROYA Probable ATP-dependent RNA helicase spindle-E OS=Drosophila yakuba
GN=spn-E PE=3 SV=1
Length = 1436
Score = 184 bits (466), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 138/444 (31%), Positives = 213/444 (47%), Gaps = 63/444 (14%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
+K LT TH+++DEVHER DFLLIV++ LL S H +K+ILMSAT+D+ S
Sbjct: 225 NKTLTHYTHIVLDEVHERDQDMDFLLIVVRRLLATNSRH----VKIILMSATIDARELSD 280
Query: 69 YFGDC----PVITA-EGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNR 123
YF PVI+A GR H + ++ D SI ++ E + P N
Sbjct: 281 YFTTTNSIPPVISASHGRKHSIEKFY-RDQMGSIKWK----------EEEDDQLVPQIND 329
Query: 124 RGKKNLVLSGWGDDSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLVC 183
G + V D++ E I+ SY E R
Sbjct: 330 HGYRAAVKIIMVIDNMEREGAIHSRM------SYDEALRY-------------------- 363
Query: 184 HVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFLR 243
GA+L+FLPG+ EI + + + +++ S + +Q+ VF
Sbjct: 364 --------GAVLIFLPGIYEIDTMAENITLMLENDRNVKVFIVRCFSLMTPENQRDVFHP 415
Query: 244 PPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQR 303
PP RK+I+ TNIAE+SIT+ DV YV D K ++ SS+ W S+AN RQR
Sbjct: 416 PPPGFRKIILTTNIAESSITVPDVSYVIDFCLTKVLVTDTATNFSSLRLTWASKANCRQR 475
Query: 304 RGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSKA 363
GR GR++ G Y + + Y++ M + +PEM R+PL L+ K L +G L+ A
Sbjct: 476 AGRVGRLRSGRVYRMVNKSFYQREMSEFGIPEMLRLPLQNSVLRAKELEMGSPVEILALA 535
Query: 364 LEPPKEEAITTAISVLYEVGA----IEG-----DEELTPLGHHLAKLPVDVLIGKMMLFG 414
L PP I I +L EVGA ++G D ++T G +++LP+D + ++++ G
Sbjct: 536 LSPPNLSDIQNTILLLKEVGALFLTVDGVYNAMDGDVTYWGTIMSRLPLDPRLSRLIILG 595
Query: 415 GIFGCLSPILSISAFLSYKSPFIY 438
+F L + ++A LS + +++
Sbjct: 596 YVFNLLEEAIIMAAGLSMRGLYVH 619
>sp|B4K5R2|SPNE_DROMO Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
mojavensis GN=spn-E PE=3 SV=1
Length = 1431
Score = 182 bits (462), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 141/444 (31%), Positives = 215/444 (48%), Gaps = 68/444 (15%)
Query: 10 KNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSRY 69
K LT TH+I+DEVHER DFLL+V++ LL S H +KVILMSAT+D+ FS+Y
Sbjct: 229 KTLTQYTHIILDEVHERDQDMDFLLLVVRRLLALNSRH----VKVILMSATIDTREFSKY 284
Query: 70 FGDC----PVITA-EGRTHPVTTYFLEDVYESINYRLALDSAAAIRYEASSKSGPVNNRR 124
F PV+TA GR P+ ++ D ++I++ K P +R
Sbjct: 285 FAMSSSLPPVVTASHGRKFPLVKFY-RDQLKNIHW----------------KDEP---QR 324
Query: 125 GKKNLVLSGWGD--DSLLSEEYINPYYDPSDYGSYSEQTRQNLKRLNEDVIDYDLLEDLV 182
+ G+ D LL + + D SY E R
Sbjct: 325 TTPGIGPEGYSDAIKLLLVIDNMERKADNQSQQSYEEAKRT------------------- 365
Query: 183 CHVDETCGEGAILVFLPGVAEIHILLDRLAASYRFGGPSSDWLLALHSSVASVDQKKVFL 242
GA+L+FLPG+ EI + + + ++ HS ++ Q++VFL
Sbjct: 366 ---------GAVLIFLPGIHEIDTMAEHIGRIVDENPNFKISIVRCHSLMSPDSQEEVFL 416
Query: 243 RPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQANARQ 302
PP RKVI+ TNI+E+SIT+ DV YV D K ++ SS+ +W S+ N RQ
Sbjct: 417 PPPLGHRKVILTTNISESSITVPDVSYVIDFCLTKVLHTDTASNFSSLRLEWASKVNCRQ 476
Query: 303 RRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKIFLSK 362
R GR GR++ G Y + T+ Y M + +PEM R PL L+ K L +G L+
Sbjct: 477 RAGRVGRLRSGRVYRMVTKDFYMNHMNEFGIPEMLRSPLQNSVLKAKELEMGNPSEILAL 536
Query: 363 ALEPPKEEAITTAISVLYEVGAI---------EGDEELTPLGHHLAKLPVDVLIGKMMLF 413
A+ PP I + +L EVGA+ E D +L+ G ++K P+DV + ++++
Sbjct: 537 AMSPPNLSDIQNTVLLLKEVGALYTTVDGVYEELDGDLSFWGKIMSKFPLDVRLSRLIIL 596
Query: 414 GGIFGCLSPILSISAFLSYKSPFI 437
G +F CL + I+A ++ +S ++
Sbjct: 597 GYVFNCLDEAIVIAAGMTVRSLYV 620
>sp|P24384|PRP22_YEAST Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=PRP22 PE=1 SV=1
Length = 1145
Score = 179 bits (453), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 138/476 (28%), Positives = 215/476 (45%), Gaps = 78/476 (16%)
Query: 184 HVDETCGEGAILVFLPGVAEI----HILLDRLAASYRFGGPSSDWL-LALHSSVASVDQK 238
H++E G G ILVFL G EI IL DR+ G + L L ++S++ S Q
Sbjct: 686 HINE--GPGDILVFLTGQEEIDSCCEILYDRVKT---LGDSIGELLILPVYSALPSEIQS 740
Query: 239 KVFLRPPEKIRKVIIATNIAETSITIDDVVYVFDCGRHKENRYNSQKKLSSMVEDWISQA 298
K+F P+ RKV+ ATNIAETSITID + YV D G K N YN++ + ++ ISQA
Sbjct: 741 KIFEPTPKGSRKVVFATNIAETSITIDGIYYVVDPGFAKINIYNARAGIEQLIVSPISQA 800
Query: 299 NARQRRGRAGRVKPGICYSLYTRHRYEKLMRPYQVPEMQRMPLVELCLQIKLLSLGRIKI 358
A QR+GRAGR PG CY LYT + M VPE+QR L L +K + + +
Sbjct: 801 QANQRKGRAGRTGPGKCYRLYTESAFYNEMLENTVPEIQRQNLSHTILMLKAMGINDLLK 860
Query: 359 FLSKALEPPKEEAITTAISVLYEVGAIEGDEELTPLGHHLAKLPVDVLIGKMMLFGGIFG 418
F ++PP + + A++ LY + +++ + +LT LG ++ P+D + + +L
Sbjct: 861 F--DFMDPPPKNLMLNALTELYHLQSLDDEGKLTNLGKEMSLFPMDPTLSRSLLSSVDNQ 918
Query: 419 CLSPILSISAFLSYKSPFIYPKDEKQNVERAKLALLTDKLEGLSDSNDSSTQSDHLVLMV 478
C I++I + LS ++ F PKD + + K DHL L+
Sbjct: 919 CSDEIVTIISMLSVQNVFYRPKDRQLEADSKKAKF-------------HHPYGDHLTLLN 965
Query: 479 AYKKWQKILLKRGTKAAQQFCSKYFLSSSVMYMIRDMRIQFGTLLADIGLINLPNKNQTG 538
Y +WQ+ ++Q+C FL + RD++ Q + IGL
Sbjct: 966 VYTRWQQ------ANYSEQYCKTNFLHFRHLKRARDVKSQISMIFKKIGL---------- 1009
Query: 539 GKKKDDLDSWFSDESQMFNMYANHSSIVKAILCAGLYPNVAATEQGVAGAALSNLRKSSN 598
L S SD +++ +G + N A + V +
Sbjct: 1010 -----KLISCHSD-----------PDLIRKTFVSGFFMNAAKRDSQVGYKTI-------- 1045
Query: 599 SAAKAHPVWYDGRREVHIHPSSINSQLKSFEHPFLVFLEKVETNKVFLRDTTIVSP 654
+G EV IHPS S L E+ ++++ V T++ ++ T + P
Sbjct: 1046 ----------NGGTEVGIHPS---SSLYGKEYEYVMYHSIVLTSREYMSQVTSIEP 1088
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 5/81 (6%)
Query: 9 DKNLTGVTHVIVDEVHERSLLGDFLLIVLKDLLEKQSAHDTPKLKVILMSATVDSNLFSR 68
D ++ + +++DE HER++ D L +LK ++A P+LKVI+ SAT++S FS
Sbjct: 591 DPEMSKYSVIMLDEAHERTVATDVLFALLK-----KAAIKRPELKVIVTSATLNSAKFSE 645
Query: 69 YFGDCPVITAEGRTHPVTTYF 89
YF +CP+I G+T PV +
Sbjct: 646 YFLNCPIINIPGKTFPVEVLY 666
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 267,545,408
Number of Sequences: 539616
Number of extensions: 11157367
Number of successful extensions: 28893
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 112
Number of HSP's successfully gapped in prelim test: 59
Number of HSP's that attempted gapping in prelim test: 28148
Number of HSP's gapped (non-prelim): 330
length of query: 735
length of database: 191,569,459
effective HSP length: 125
effective length of query: 610
effective length of database: 124,117,459
effective search space: 75711649990
effective search space used: 75711649990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)